Psyllid ID: psy12608


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60-----
MSSDDAGASAGVVVDVVLYPLDTIKTRLQSQYGFWRSGGFKAIYKGLGPAAISSPIQEYTVIVVF
ccccHHHHHHHHHHHcccccHHHHHHHHHcccccHHccccccccccHHHHHHHHHHHHcEEEEEc
cccHHHcccccEEEEEEEccHHHHHHHccccccHHcccccccEccccccEEEccccccEEEEEEc
mssddagasagVVVDVVLYPLDTIKTRLQSQYGFWRSGGFKAiykglgpaaisspiqeytVIVVF
mssddagasagvVVDVVLYPLDTIKTRLQSQYGFWRSGGFKAIYKGLGpaaisspiqeyTVIVVF
MssddagasagvvvdvvLYPLDTIKTRLQSQYGFWRSGGFKAIYKGLGPAAISSPIQEYTVIVVF
*********AGVVVDVVLYPLDTIKTRLQSQYGFWRSGGFKAIYKGLGPAAISSPIQEYTVIVV*
*SSDDAGASAGVVVDVVLYPLDTIKTRLQSQYGFWRSGGFKAIYKGLGPAAISSPIQEYTVIVVF
*********AGVVVDVVLYPLDTIKTRLQSQYGFWRSGGFKAIYKGLGPAAISSPIQEYTVIVVF
**SDDAGASAGVVVDVVLYPLDTIKTRLQSQYGFWRSGGFKAIYKGLGPAAISSPIQEYTVIVVF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
ooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSSDDAGASAGVVVDVVLYPLDTIKTRLQSQYGFWRSGGFKAIYKGLGPAAISSPIQEYTVIVVF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query65 2.2.26 [Sep-21-2011]
Q9VBN7 283 S-adenosylmethionine mito yes N/A 0.646 0.148 0.690 4e-12
Q4V9P0 267 S-adenosylmethionine mito yes N/A 0.753 0.183 0.632 3e-11
Q6GLA2 269 S-adenosylmethionine mito yes N/A 0.753 0.182 0.591 4e-10
O60029 271 Putative mitochondrial ca yes N/A 0.830 0.199 0.5 4e-10
P38921 284 Putative mitochondrial ca yes N/A 0.753 0.172 0.551 5e-10
Q5U680 274 S-adenosylmethionine mito yes N/A 0.753 0.178 0.612 8e-10
Q641C8 266 S-adenosylmethionine mito N/A N/A 0.753 0.184 0.591 9e-10
Q70HW3 274 S-adenosylmethionine mito yes N/A 0.753 0.178 0.632 1e-09
A6QR09 274 S-adenosylmethionine mito no N/A 0.753 0.178 0.591 3e-09
Q10442 345 Uncharacterized mitochond yes N/A 0.753 0.142 0.510 7e-09
>sp|Q9VBN7|SAMC_DROME S-adenosylmethionine mitochondrial carrier protein homolog OS=Drosophila melanogaster GN=CG4743 PE=2 SV=2 Back     alignment and function desciption
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 29/42 (69%), Positives = 37/42 (88%)

Query: 6  AGASAGVVVDVVLYPLDTIKTRLQSQYGFWRSGGFKAIYKGL 47
          AG  AG+VVD+ L+P+DT+KTRLQS+ GFWR+GGF+ IYKGL
Sbjct: 19 AGGVAGMVVDIALFPIDTVKTRLQSELGFWRAGGFRGIYKGL 60




Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. May mediate the transport of S-adenosylmethionine (SAM) into the mitochondria.
Drosophila melanogaster (taxid: 7227)
>sp|Q4V9P0|SAMC_DANRE S-adenosylmethionine mitochondrial carrier protein OS=Danio rerio GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|Q6GLA2|SAMC_XENTR S-adenosylmethionine mitochondrial carrier protein OS=Xenopus tropicalis GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|O60029|PET8_ASHGO Putative mitochondrial carrier protein PET8 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PET8 PE=3 SV=1 Back     alignment and function description
>sp|P38921|PET8_YEAST Putative mitochondrial carrier protein PET8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PET8 PE=1 SV=1 Back     alignment and function description
>sp|Q5U680|SAMC_MOUSE S-adenosylmethionine mitochondrial carrier protein OS=Mus musculus GN=Slc25a26 PE=2 SV=2 Back     alignment and function description
>sp|Q641C8|SAMC_XENLA S-adenosylmethionine mitochondrial carrier protein OS=Xenopus laevis GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|Q70HW3|SAMC_HUMAN S-adenosylmethionine mitochondrial carrier protein OS=Homo sapiens GN=SLC25A26 PE=2 SV=1 Back     alignment and function description
>sp|A6QR09|SAMC_BOVIN S-adenosylmethionine mitochondrial carrier protein OS=Bos taurus GN=SLC25A26 PE=2 SV=1 Back     alignment and function description
>sp|Q10442|YDE9_SCHPO Uncharacterized mitochondrial carrier C12B10.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC12B10.09 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query65
193683527 288 PREDICTED: s-adenosylmethionine mitochon 0.769 0.173 0.7 1e-12
239792084 288 ACYPI007837 [Acyrthosiphon pisum] 0.769 0.173 0.7 1e-12
307174063 275 S-adenosylmethionine mitochondrial carri 0.830 0.196 0.611 2e-12
260822617 282 hypothetical protein BRAFLDRAFT_72535 [B 0.753 0.173 0.693 6e-12
332018493 280 S-adenosylmethionine mitochondrial carri 0.753 0.175 0.653 8e-12
322798102 258 hypothetical protein SINV_11682 [Solenop 0.8 0.201 0.596 1e-11
242023544 377 mitochondrial carrier protein, putative 0.815 0.140 0.648 2e-11
452978472 277 hypothetical protein MYCFIDRAFT_58397 [P 0.753 0.176 0.673 3e-11
241028778 292 carrier protein PET8, putative [Ixodes s 0.753 0.167 0.673 3e-11
443706548 261 hypothetical protein CAPTEDRAFT_109350, 0.753 0.187 0.653 4e-11
>gi|193683527|ref|XP_001944821.1| PREDICTED: s-adenosylmethionine mitochondrial carrier protein-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/50 (70%), Positives = 41/50 (82%)

Query: 6  AGASAGVVVDVVLYPLDTIKTRLQSQYGFWRSGGFKAIYKGLGPAAISSP 55
          AGA AG VVD+ L+PLDT+KTRLQSQYGF +SGGF+ IYKGL P  I +P
Sbjct: 29 AGAVAGTVVDIALFPLDTLKTRLQSQYGFIQSGGFRGIYKGLTPTIIGAP 78




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239792084|dbj|BAH72423.1| ACYPI007837 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307174063|gb|EFN64750.1| S-adenosylmethionine mitochondrial carrier protein [Camponotus floridanus] Back     alignment and taxonomy information
>gi|260822617|ref|XP_002606698.1| hypothetical protein BRAFLDRAFT_72535 [Branchiostoma floridae] gi|229292042|gb|EEN62708.1| hypothetical protein BRAFLDRAFT_72535 [Branchiostoma floridae] Back     alignment and taxonomy information
>gi|332018493|gb|EGI59083.1| S-adenosylmethionine mitochondrial carrier protein [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|322798102|gb|EFZ19941.1| hypothetical protein SINV_11682 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|242023544|ref|XP_002432192.1| mitochondrial carrier protein, putative [Pediculus humanus corporis] gi|212517589|gb|EEB19454.1| mitochondrial carrier protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|452978472|gb|EME78235.1| hypothetical protein MYCFIDRAFT_58397 [Pseudocercospora fijiensis CIRAD86] Back     alignment and taxonomy information
>gi|241028778|ref|XP_002406362.1| carrier protein PET8, putative [Ixodes scapularis] gi|215491948|gb|EEC01589.1| carrier protein PET8, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|443706548|gb|ELU02536.1| hypothetical protein CAPTEDRAFT_109350, partial [Capitella teleta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query65
FB|FBgn0039357 283 CG4743 [Drosophila melanogaste 0.569 0.130 0.702 1.3e-10
ZFIN|ZDB-GENE-050913-126 267 slc25a26 "solute carrier famil 0.569 0.138 0.675 2e-08
RGD|1308811124 Slc25a26 "solute carrier famil 0.569 0.298 0.648 1.8e-07
UNIPROTKB|G4NCK7 296 MGG_01051 "Uncharacterized pro 0.507 0.111 0.666 2e-07
SGD|S000004948 284 PET8 "S-adenosylmethionine tra 0.553 0.126 0.583 2.4e-07
UNIPROTKB|E2QTY9 274 SLC25A26 "Uncharacterized prot 0.569 0.135 0.648 4.7e-07
UNIPROTKB|Q641C8 266 slc25a26 "S-adenosylmethionine 0.569 0.139 0.621 5.6e-07
UNIPROTKB|Q6GLA2 269 slc25a26 "S-adenosylmethionine 0.569 0.137 0.621 5.8e-07
MGI|MGI:1914832 274 Slc25a26 "solute carrier famil 0.569 0.135 0.621 6.1e-07
UNIPROTKB|F8WAB8 274 SLC25A26 "S-adenosylmethionine 0.569 0.135 0.648 7.9e-07
FB|FBgn0039357 CG4743 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 152 (58.6 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 26/37 (70%), Positives = 32/37 (86%)

Query:    18 LYPLDTIKTRLQSQYGFWRSGGFKAIYKGLGPAAISS 54
             L+P+DT+KTRLQS+ GFWR+GGF+ IYKGL PAA  S
Sbjct:    31 LFPIDTVKTRLQSELGFWRAGGFRGIYKGLAPAAAGS 67




GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
ZFIN|ZDB-GENE-050913-126 slc25a26 "solute carrier family 25, member 26" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1308811 Slc25a26 "solute carrier family 25 (S-adenosylmethionine carrier), member 26" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G4NCK7 MGG_01051 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
SGD|S000004948 PET8 "S-adenosylmethionine transporter of the mitochondrial inner membrane" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|E2QTY9 SLC25A26 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q641C8 slc25a26 "S-adenosylmethionine mitochondrial carrier protein" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q6GLA2 slc25a26 "S-adenosylmethionine mitochondrial carrier protein" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
MGI|MGI:1914832 Slc25a26 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F8WAB8 SLC25A26 "S-adenosylmethionine mitochondrial carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6GLA2SAMC_XENTRNo assigned EC number0.59180.75380.1821yesN/A
Q5U680SAMC_MOUSENo assigned EC number0.61220.75380.1788yesN/A
Q10442YDE9_SCHPONo assigned EC number0.51020.75380.1420yesN/A
Q9VBN7SAMC_DROMENo assigned EC number0.69040.64610.1484yesN/A
P38921PET8_YEASTNo assigned EC number0.55100.75380.1725yesN/A
Q4V9P0SAMC_DANRENo assigned EC number0.63260.75380.1835yesN/A
Q70HW3SAMC_HUMANNo assigned EC number0.63260.75380.1788yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query65
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-10
PTZ00168 259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-05
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 50.7 bits (122), Expect = 2e-10
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 15/62 (24%)

Query: 6  AGASAGVVVDVVLYPLDTIKTRLQSQYGF---------------WRSGGFKAIYKGLGPA 50
          AG  AG +   V YPLD +KTRLQS                   ++  G + +YKGL P 
Sbjct: 11 AGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYKGLLPN 70

Query: 51 AI 52
           +
Sbjct: 71 LL 72


Length = 96

>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 65
KOG0752|consensus 320 99.79
KOG0764|consensus 299 99.77
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.77
PTZ00168259 mitochondrial carrier protein; Provisional 99.76
KOG0752|consensus320 99.76
PTZ00168 259 mitochondrial carrier protein; Provisional 99.72
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 99.71
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 99.71
KOG0758|consensus297 99.71
KOG0759|consensus286 99.7
KOG0768|consensus323 99.67
KOG0764|consensus299 99.67
KOG0768|consensus 323 99.66
KOG0753|consensus317 99.65
KOG0757|consensus 319 99.65
KOG0759|consensus 286 99.61
KOG0754|consensus 294 99.61
KOG0760|consensus 302 99.6
KOG0762|consensus311 99.6
KOG0756|consensus299 99.6
KOG0766|consensus297 99.59
KOG0760|consensus302 99.59
KOG0762|consensus 311 99.58
KOG0758|consensus 297 99.57
KOG0761|consensus361 99.55
KOG0765|consensus333 99.53
KOG0769|consensus 308 99.51
KOG0753|consensus 317 99.51
KOG0770|consensus 353 99.5
KOG0750|consensus304 99.48
KOG0751|consensus 694 99.48
KOG0751|consensus694 99.48
KOG0763|consensus301 99.46
KOG0754|consensus294 99.45
KOG0757|consensus319 99.44
KOG0761|consensus 361 99.44
KOG0766|consensus 297 99.41
KOG0763|consensus 301 99.38
KOG0036|consensus 463 99.34
KOG0036|consensus463 99.33
KOG0770|consensus 353 99.33
KOG0767|consensus 333 99.33
KOG0769|consensus308 99.3
KOG0750|consensus 304 99.29
KOG0765|consensus 333 99.24
KOG0755|consensus 320 99.23
KOG0755|consensus320 99.2
KOG0767|consensus 333 99.12
KOG0749|consensus 298 99.11
KOG0756|consensus 299 99.05
KOG0749|consensus 298 98.99
KOG2954|consensus427 98.53
KOG1519|consensus297 98.39
KOG1519|consensus 297 98.2
KOG2745|consensus 321 98.04
KOG2745|consensus 321 97.88
KOG2954|consensus 427 90.04
>KOG0752|consensus Back     alignment and domain information
Probab=99.79  E-value=2.1e-20  Score=113.91  Aligned_cols=64  Identities=31%  Similarity=0.527  Sum_probs=60.4

Q ss_pred             hhhhhhHHHHHHHHhhhccHHHHHHHHHhcc-------------cchhccccccccccchHHHHhHHHhHhhhheeC
Q psy12608          2 SSDDAGASAGVVVDVVLYPLDTIKTRLQSQY-------------GFWRSGGFKAIYKGLGPAAISSPIQEYTVIVVF   65 (65)
Q Consensus         2 ~~~~~g~~a~~~~~~~~~P~d~ik~~~q~~~-------------~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y   65 (65)
                      .+++||++||+++..++||+|++|||+-++.             +|+++||++|||||+.|++++.+|+.+++|.+|
T Consensus       128 ~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Y  204 (320)
T KOG0752|consen  128 VRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAY  204 (320)
T ss_pred             HHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHH
Confidence            5789999999999999999999999998885             389999999999999999999999999999887



>KOG0764|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query65
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-09
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-06
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-05
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-08
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-08
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-05
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score = 49.2 bits (118), Expect = 4e-09
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 17/61 (27%)

Query: 6   AGASAGVVVDVVLYPLDTIKTRLQSQYGF-----------------WRSGGFKAIYKGLG 48
           +G +AG      +YPLD  +TRL +  G                  ++S G + +Y+G  
Sbjct: 118 SGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFN 177

Query: 49  P 49
            
Sbjct: 178 V 178


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query65
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.77
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 99.75
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 99.74
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 99.73
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=99.77  E-value=1.9e-19  Score=107.49  Aligned_cols=64  Identities=25%  Similarity=0.385  Sum_probs=59.1

Q ss_pred             hhhhhhHHHHHHHHhhhccHHHHHHHHHhcc------------cchhccccccccccchHHHHhHHHhHhhhheeC
Q psy12608          2 SSDDAGASAGVVVDVVLYPLDTIKTRLQSQY------------GFWRSGGFKAIYKGLGPAAISSPIQEYTVIVVF   65 (65)
Q Consensus         2 ~~~~~g~~a~~~~~~~~~P~d~ik~~~q~~~------------~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y   65 (65)
                      .++++|++|+++++.+++|+|++|+|+|.+.            +++++||++|||||+.|+++|.+|.++++|.+|
T Consensus       204 ~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~y  279 (303)
T 2lck_A          204 CHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTY  279 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHH
Confidence            3578999999999999999999999999874            378999999999999999999999999999876



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 65
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-09
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 48.6 bits (114), Expect = 3e-09
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 6  AGASAGVVVDVVLYPLDTIKTRLQSQYGFWRSGGFKAIYKGLGPAAISSPIQEY 59
          AG  A  +    + P++ +K  LQ Q    +    +  YKG+    +  P ++ 
Sbjct: 12 AGGVAAAISKTAVAPIERVKLLLQVQ-HASKQISAEKQYKGIIDCVVRIPKEQG 64


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query65
d1okca_ 292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.72
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.72
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=99.72  E-value=1.8e-18  Score=100.59  Aligned_cols=64  Identities=19%  Similarity=0.178  Sum_probs=58.7

Q ss_pred             hhhhhhHHHHHHHHhhhccHHHHHHHHHhcc-------------------cchhccccccccccchHHHHhHHHhHhhhh
Q psy12608          2 SSDDAGASAGVVVDVVLYPLDTIKTRLQSQY-------------------GFWRSGGFKAIYKGLGPAAISSPIQEYTVI   62 (65)
Q Consensus         2 ~~~~~g~~a~~~~~~~~~P~d~ik~~~q~~~-------------------~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~   62 (65)
                      +.+++|++|++++.++++|+|++|+|+|++.                   +++++||+++||+|+.+.+++..|...++|
T Consensus         8 ~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~   87 (292)
T d1okca_           8 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNF   87 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchhH
Confidence            5789999999999999999999999999974                   278899999999999999999999999988


Q ss_pred             eeC
Q psy12608         63 VVF   65 (65)
Q Consensus        63 ~~y   65 (65)
                      .+|
T Consensus        88 ~~~   90 (292)
T d1okca_          88 AFK   90 (292)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure