Psyllid ID: psy12817
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1201 | 2.2.26 [Sep-21-2011] | |||||||
| A8E657 | 926 | Alpha-aminoadipic semiald | yes | N/A | 0.412 | 0.534 | 0.579 | 1e-171 | |
| Q9UDR5 | 926 | Alpha-aminoadipic semiald | yes | N/A | 0.435 | 0.564 | 0.559 | 1e-169 | |
| Q99K67 | 926 | Alpha-aminoadipic semiald | yes | N/A | 0.404 | 0.524 | 0.579 | 1e-167 | |
| A2VCW9 | 926 | Alpha-aminoadipic semiald | yes | N/A | 0.447 | 0.579 | 0.531 | 1e-167 | |
| Q9SMZ4 | 1064 | Alpha-aminoadipic semiald | yes | N/A | 0.687 | 0.776 | 0.352 | 1e-148 | |
| Q9P4R4 | 450 | Saccharopine dehydrogenas | N/A | N/A | 0.282 | 0.753 | 0.399 | 8e-68 | |
| O59711 | 450 | Saccharopine dehydrogenas | yes | N/A | 0.291 | 0.777 | 0.389 | 1e-66 | |
| Q54NG9 | 480 | Probable saccharopine deh | no | N/A | 0.334 | 0.837 | 0.348 | 4e-63 | |
| P38999 | 446 | Saccharopine dehydrogenas | yes | N/A | 0.296 | 0.798 | 0.391 | 2e-61 | |
| P38998 | 373 | Saccharopine dehydrogenas | no | N/A | 0.277 | 0.892 | 0.255 | 8e-19 |
| >sp|A8E657|AASS_BOVIN Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Bos taurus GN=AASS PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 603 bits (1555), Expect = e-171, Method: Compositional matrix adjust.
Identities = 289/499 (57%), Positives = 375/499 (75%), Gaps = 4/499 (0%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS 63
V+A+RRED + WERRA LAP +VK + G KV++QPSNRRA + Y AG I+QEDIS
Sbjct: 25 VMALRREDVNAWERRAPLAPRHVKGITNLGYKVLIQPSNRRAIHDKEYVKAGGILQEDIS 84
Query: 64 EASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEG 123
EA +I GVK+ P + L+P KTY FSHTIKAQE NM LLD IL++ IRL+DYEK+VD G
Sbjct: 85 EACLILGVKRPPEEKLMPKKTYAFFSHTIKAQEANMGLLDEILKQEIRLIDYEKMVDHRG 144
Query: 124 NRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYE 183
RVVAFG++AGVAG++NILHG+GLRLLALGHHTPFMHIG AHNYRNS A QA+RDAGYE
Sbjct: 145 IRVVAFGQWAGVAGIINILHGMGLRLLALGHHTPFMHIGMAHNYRNSGQAVQAVRDAGYE 204
Query: 184 ISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE 243
ISLG MPKSIGPLT VFTG+GNVS+GAQEIF ELP EYV P L++V+++G K+Y
Sbjct: 205 ISLGLMPKSIGPLTFVFTGTGNVSKGAQEIFNELPCEYVEPHELKEVSQNGDLRKVYGTV 264
Query: 244 VRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPD 303
+ R ++L R G YD EY++ P Y S F + IAPY + +INGIYW +P+LLT D
Sbjct: 265 LSRHHHLVRKTDGVYDPVEYDKYPERYISRFNTDIAPYTTCLINGIYWEQNTPRLLTRQD 324
Query: 304 AKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADS 363
A++LL P P + +G P LPH+L+ ICDISAD GGSIEFM ECTTI+ PFC+YDAD
Sbjct: 325 AQSLLAPGKSP-VAGVEGCPALPHKLVAICDISADTGGSIEFMTECTTIERPFCMYDADQ 383
Query: 364 NKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPA 423
+ S +G G+L+CSIDN+P QLP+E+T++FG++++PY +++ SDA++P+E NFSP
Sbjct: 384 HIIHDSVEGSGILMCSIDNLPAQLPIESTEYFGDMLYPYVEEMILSDATQPLESQNFSPV 443
Query: 424 VQAAIIASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEYLH 483
V+ A+IASNG L+ K+KYI+ LR+ H + + VL+LG+GYVS P++EYL
Sbjct: 444 VRDAVIASNGMLSNKYKYIQKLREN---REHAQSLSMGTKKKVLVLGSGYVSEPVLEYLL 500
Query: 484 RDENIHITLGSLLKEDIDK 502
RD++I IT+GS +K I++
Sbjct: 501 RDDSIEITVGSDMKNQIEQ 519
|
Bifunctional enzyme that catalyzes the first two steps in lysine degradation. The N-terminal and the C-terminal contain lysine-oxoglutarate reductase and saccharopine dehydrogenase activity, respectively. Bos taurus (taxid: 9913) EC: 1EC: .EC: 5EC: .EC: 1EC: .EC: 9 |
| >sp|Q9UDR5|AASS_HUMAN Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Homo sapiens GN=AASS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 596 bits (1537), Expect = e-169, Method: Compositional matrix adjust.
Identities = 299/534 (55%), Positives = 384/534 (71%), Gaps = 11/534 (2%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS 63
V+A+RRED + WERRA LAP ++K + G KV++QPSNRRA + Y AG I+QEDIS
Sbjct: 25 VLAVRREDVNAWERRAPLAPKHIKGITNLGYKVLIQPSNRRAIHDKDYVKAGGILQEDIS 84
Query: 64 EASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEG 123
EA +I GVK+ P + L+ KTY FSHTIKAQE NM LLD IL++ IRL+DYEK+VD G
Sbjct: 85 EACLILGVKRPPEEKLMSRKTYAFFSHTIKAQEANMGLLDEILKQEIRLIDYEKMVDHRG 144
Query: 124 NRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYE 183
RVVAFG++AGVAGM+NILHG+GLRLLALGHHTPFMHIG AHNYRNS A QA+RDAGYE
Sbjct: 145 VRVVAFGQWAGVAGMINILHGMGLRLLALGHHTPFMHIGMAHNYRNSSQAVQAVRDAGYE 204
Query: 184 ISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE 243
ISLG MPKSIGPLT VFTG+GNVS+GAQ IF ELP EYV P L++V++ G K+Y
Sbjct: 205 ISLGLMPKSIGPLTFVFTGTGNVSKGAQAIFNELPCEYVEPHELKEVSQTGDLRKVYGTV 264
Query: 244 VRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPD 303
+ R ++L R YD EY+++P Y S F + IAPY + +INGIYW +P+LLT D
Sbjct: 265 LSRHHHLVRKTDAVYDPAEYDKHPERYISRFNTDIAPYTTCLINGIYWEQNTPRLLTRQD 324
Query: 304 AKNLLRPNHMPWLPTS-DGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDAD 362
A++LL P + P +G P LPH+L+ ICDISAD GGSIEFM ECTTI+ PFC+YDAD
Sbjct: 325 AQSLLAPGK--FSPAGVEGCPALPHKLVAICDISADTGGSIEFMTECTTIEHPFCMYDAD 382
Query: 363 SNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSP 422
+ S +G G+L+CSIDN+P QLP+EAT+ FG++++PY +++ SDA++P+E NFSP
Sbjct: 383 QHIIHDSVEGSGILMCSIDNLPAQLPIEATECFGDMLYPYVEEMILSDATQPLESQNFSP 442
Query: 423 AVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKAD-IQTEESRNVLLLGAGYVSRPLIEY 481
V+ A+I SNG L K+KYI+ LR+ SR +A + R VL+LG+GY+S P++EY
Sbjct: 443 VVRDAVITSNGTLPDKYKYIQTLRE----SRERAQSLSMGTRRKVLVLGSGYISEPVLEY 498
Query: 482 LHRDENIHITLGSLLK---EDIDKDKFISFVQSDASKPIEEHNFSPAVQAAIIA 532
L RD NI IT+GS +K E + K I+ V D K E+ F A Q +I+
Sbjct: 499 LSRDGNIEITVGSDMKNQIEQLGKKYNINPVSMDICKQEEKLGFLVAKQDLVIS 552
|
Bifunctional enzyme that catalyzes the first two steps in lysine degradation. The N-terminal and the C-terminal contain lysine-ketoglutarate reductase and saccharopine dehydrogenase activity, respectively. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q99K67|AASS_MOUSE Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Mus musculus GN=Aass PE=2 SV=1 | Back alignment and function description |
|---|
Score = 590 bits (1522), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/492 (57%), Positives = 367/492 (74%), Gaps = 6/492 (1%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS 63
V+A+RRED + WERRA LAP ++K + + G KV++QPSNRRA + Y AG I+QEDI+
Sbjct: 25 VMALRREDVNAWERRAPLAPKHIKGITKLGYKVLIQPSNRRAIHDKEYVRAGGILQEDIT 84
Query: 64 EASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEG 123
EA +I GVK+ P + L+ KTY FSHTIKAQE NM LLD +L++ IRL+DYEK+VD G
Sbjct: 85 EACLILGVKRPPEEKLMSKKTYAFFSHTIKAQEANMNLLDEVLKQEIRLIDYEKMVDHRG 144
Query: 124 NRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYE 183
+R+VAFG++AGVAGM+NILHG+GLRLLALGHHTPFMH+G AHNYRNS A QA+RDAGYE
Sbjct: 145 SRIVAFGQWAGVAGMINILHGMGLRLLALGHHTPFMHLGMAHNYRNSSQAVQAVRDAGYE 204
Query: 184 ISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE 243
ISLG MPKSIGPLT VFTG+GNVS+GAQE+F ELP EYV P L++V++ G K+Y
Sbjct: 205 ISLGLMPKSIGPLTFVFTGTGNVSKGAQEVFNELPCEYVEPHELREVSKTGDLRKVYGTV 264
Query: 244 VRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPD 303
+ R ++L R G YD EY + P Y S F + IAPY + +INGIYW +P+LLT D
Sbjct: 265 LSRHHHLVRKTDGVYDPVEYEKYPERYTSRFNTDIAPYTTCLINGIYWEQNTPRLLTRQD 324
Query: 304 AKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADS 363
A++LL P + +G P LPH+L+ ICDISAD GGSI+FM ECTTI+ PFC+YDAD
Sbjct: 325 AQSLLVPVKSS-VVPVEGCPELPHKLVAICDISADTGGSIDFMTECTTIERPFCMYDADQ 383
Query: 364 NKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPA 423
S +G G+L+CSIDN+P QLP+EAT++FG++++PY ++L SDAS+P+E NFSP
Sbjct: 384 QIIHDSVEGSGILMCSIDNLPAQLPIEATEYFGDMLYPYVEEMLLSDASQPLESQNFSPV 443
Query: 424 VQAAIIASNGELTPKFKYIEDLRQQSVKSRHKAD-IQTEESRNVLLLGAGYVSRPLIEYL 482
V+ A+I SNG LT K+KYI+ LR+ SR + + + VL+LG+GYVS P++EYL
Sbjct: 444 VRDAVITSNGLLTDKYKYIQKLRE----SRERIQFLSMSTKKKVLVLGSGYVSGPVLEYL 499
Query: 483 HRDENIHITLGS 494
RD NI ITLGS
Sbjct: 500 SRDNNIEITLGS 511
|
Bifunctional enzyme that catalyzes the first two steps in lysine degradation. The N-terminal and the C-terminal contain lysine-oxoglutarate reductase and saccharopine dehydrogenase activity, respectively. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 9 |
| >sp|A2VCW9|AASS_RAT Alpha-aminoadipic semialdehyde synthase, mitochondrial OS=Rattus norvegicus GN=Aass PE=2 SV=1 | Back alignment and function description |
|---|
Score = 588 bits (1517), Expect = e-167, Method: Compositional matrix adjust.
Identities = 302/568 (53%), Positives = 392/568 (69%), Gaps = 31/568 (5%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS 63
V+A+RRED + WERRA LAP ++K + + G KV++QPSNRRA + Y AG I+QEDI+
Sbjct: 25 VMALRREDVNAWERRAPLAPKHIKGITKLGYKVLIQPSNRRAIHDKEYVRAGGILQEDIT 84
Query: 64 EASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEG 123
EA +I GVK+ P + L+ KTY FSHTIKAQE NM LLD +L++ IRL+DYEK+VD G
Sbjct: 85 EACLILGVKRPPEEKLMSKKTYAFFSHTIKAQEANMSLLDEVLKQEIRLIDYEKMVDHRG 144
Query: 124 NRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYE 183
+R+VAFG +AGVAGM+NILHG+GLRLLALGHHTPFMH+G AHNYRNS A QA+RDAGYE
Sbjct: 145 SRIVAFGHWAGVAGMINILHGMGLRLLALGHHTPFMHLGMAHNYRNSSQAVQAVRDAGYE 204
Query: 184 ISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE 243
ISLG MPKSIGPLT VFTG+GNVS+GAQE+F ELP EYV P L++V++ G K+Y
Sbjct: 205 ISLGLMPKSIGPLTFVFTGTGNVSKGAQEVFNELPCEYVEPHELKEVSKTGDLRKVYGTV 264
Query: 244 VRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPD 303
+ R ++L R G YD EY + P Y S F + IAPY + +INGIYW +P+LLT D
Sbjct: 265 LSRHHHLVRKTDGVYDPVEYEKYPERYISRFNADIAPYTTCLINGIYWEQNTPRLLTRQD 324
Query: 304 AKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADS 363
A++LL P + +G P LPH+L+ ICDISAD GGSI+FM ECTTI+ PFC+YDAD
Sbjct: 325 AQSLLVPVKSS-VVPVEGCPELPHKLVAICDISADTGGSIDFMTECTTIERPFCMYDADQ 383
Query: 364 NKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPA 423
+ S +G G+L+CSIDN+P QLP+EAT++FG++++PY ++L SDAS+P+E NFSP
Sbjct: 384 HIIHDSVEGSGILMCSIDNLPAQLPIEATEYFGDMLYPYVEEMLLSDASQPLESQNFSPV 443
Query: 424 VQAAIIASNGELTPKFKYIEDLRQQSVKSRHKAD-IQTEESRNVLLLGAGYVSRPLIEYL 482
V+ A+I SNG LT K+KYI+ LR+ SR + + + VL+LG+GYVS P++EYL
Sbjct: 444 VRDAVITSNGLLTDKYKYIQKLRE----SRERIQFLSMSTKKKVLVLGSGYVSGPVLEYL 499
Query: 483 HRDENIHITLGSLL---------KEDID---------KDKFISFVQS-DASKPIEEHNFS 523
R NI ITLGS + K DI+ +DK S V+S D + +
Sbjct: 500 SRGNNIEITLGSDMTNQMQQLSKKYDINTVNVTVGKQEDKLQSLVESQDLVISLLPYVLH 559
Query: 524 PAVQAAIIASN------GELTPKFKYIE 545
P V A I S +TP K +E
Sbjct: 560 PVVAKACIDSKVNMVTASYITPAMKELE 587
|
Bifunctional enzyme that catalyzes the first two steps in lysine degradation. The N-terminal and the C-terminal contain lysine-oxoglutarate reductase and saccharopine dehydrogenase activity, respectively. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q9SMZ4|AASS_ARATH Alpha-aminoadipic semialdehyde synthase OS=Arabidopsis thaliana GN=LKR/SDH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 320/907 (35%), Positives = 488/907 (53%), Gaps = 81/907 (8%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLV-----RSGV-KVIVQPSNRRAYPVQAYANAGAI 57
V+ I E + WERR L PS+ RL+ R+G+ +++VQPS +R + Y + G
Sbjct: 16 VVGILAETVNKWERRTPLTPSHCARLLHGGKDRTGISRIVVQPSAKRIHHDALYEDVGCE 75
Query: 58 IQEDISEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEK 117
I +D+S+ +I G+KQ ++++LP + Y FSHT KAQ+ NMPLLD IL + + L DYE
Sbjct: 76 ISDDLSDCGLILGIKQPELEMILPERAYAFFSHTHKAQKENMPLLDKILSERVTLCDYEL 135
Query: 118 LVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAI 177
+V D G R++AFGKYAG AG+V+ LHGLG R L LG+ TPF+ +G ++ Y + A+ A+
Sbjct: 136 IVGDHGKRLLAFGKYAGRAGLVDFLHGLGQRKLILGYSTPFLSLGASYMYSSLAAAKAAV 195
Query: 178 RDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEML-------QKV 230
G EI+ +P I PL VFTG+GNVS GAQEIF+ LP+ +V P L + +
Sbjct: 196 ISVGEEIASQGLPLGICPLVFVFTGTGNVSLGAQEIFKLLPHTFVEPSKLPELFVKDKGI 255
Query: 231 AEHGSNTK----IYACEVRRRNYLE-RIKGGGYDYQEYNENPSLYRSLFASKIAPYASII 285
+++G +TK +Y C + ++ +E + +D +Y +P Y +F KI+PY S++
Sbjct: 256 SQNGISTKRVYQVYGCIITSQDMVEHKDPSKSFDKADYYAHPEHYNPVFHEKISPYTSVL 315
Query: 286 INGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEF 345
+N +YW P LL+ ++L T G P L+GICDI+ D GGSIEF
Sbjct: 316 VNCMYWEKRFPCLLSTKQLQDL----------TKKGLP-----LVGICDITCDIGGSIEF 360
Query: 346 MNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALD 405
+N T ID+PF ++ +N G GVL ++D +PT+ EA+ FG+++ +
Sbjct: 361 VNRATLIDSPFFRFNPSNNSYYDDMDGDGVLCMAVDILPTEFAKEASQHFGDILSGFVGS 420
Query: 406 ILQSDASKPIEEHNFSPAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHK----ADIQTE 461
+ + H ++ A I+ GELT ++YI +R+ + + + ++
Sbjct: 421 LASMTEISDLPAH-----LKRACISYRGELTSLYEYIPRMRKSNPEEAQDNIIANGVSSQ 475
Query: 462 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKDKFISFVQSDASKPIEEHN 521
+ N+L+ +G+ L + +E + + + + K + +++ +E
Sbjct: 476 RTFNILVSLSGH----LFDKFLINEALDMIEAAGGSFHLAKCELGQSADAESYSELEVGA 531
Query: 522 FSPAVQAAIIASNGELT-PKFKYIEDLRQQSVKSRHKADIQTE----------ESRNVLL 570
V II S L P YI R+ + S +Q E + VL+
Sbjct: 532 DDKRVLDQIIDSLTRLANPNEDYISPHREANKISLKIGKVQQENEIKEKPEMTKKSGVLI 591
Query: 571 LGAGYVSRPLIEYL--------------------HRDENIHITLGSLLKEDIDKVTNEFG 610
LGAG V RP ++L ++H+ + SL +D +
Sbjct: 592 LGAGRVCRPAADFLASVRTISSQQWYKTYFGADSEEKTDVHVIVASLYLKDAKETVEGIS 651
Query: 611 RVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEM 670
VEA +DV++ S++L V D+V+SLLP + H VA+ CI+ K+LVTASY+ E
Sbjct: 652 DVEAVRLDVSD--SESLLKYVSQVDVVLSLLPASCHAVVAKTCIELKKHLVTASYVDDET 709
Query: 671 MALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSE 730
LHE+A SAGIT+L E+GLDPGIDH++AM+ I+ AH+ GKV+SF SYCGGLP+P +
Sbjct: 710 SMLHEKAKSAGITILGEMGLDPGIDHMMAMKMINDAHIKKGKVKSFTSYCGGLPSPAAAN 769
Query: 731 NPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTAR-PLDFLPGFSFEGFAN 789
NPL YKFSW+P G + + AKY N ++ + AR + LP F+ E F N
Sbjct: 770 NPLAYKFSWNPAGAIRAGQNPAKYKSNGDIIHVDGKNLYDSAARFRVPNLPAFALECFPN 829
Query: 790 RDSLRYAQLYNIAAEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWR 849
RDSL Y + Y I +EA T+ RGTLRY GF M + KLG D + + L +G I +
Sbjct: 830 RDSLVYGEHYGIESEATTIFRGTLRYEGFSMIMATLSKLGFFDSEANQVL-STGKRITFG 888
Query: 850 ELVCTLL 856
L+ +L
Sbjct: 889 ALLSNIL 895
|
Bifunctional enzyme that catalyzes the first two steps in lysine degradation. The N-terminal and the C-terminal contain lysine-oxoglutarate reductase and saccharopine dehydrogenase activity, respectively. Negatively regulates free Lys accumulation in seeds. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q9P4R4|LYS9_MAGO7 Saccharopine dehydrogenase [NADP(+), L-glutamate-forming] OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=LYS3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 259 bits (663), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 215/363 (59%), Gaps = 24/363 (6%)
Query: 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGS 624
+++VL+LG+G+V+RP ++ L D I +T+ E K++ +DVN+ +
Sbjct: 3 TKSVLMLGSGFVTRPTLDVL-TDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAA 61
Query: 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITV 684
L V DLV+SL+PY H V + I+ K++VT SY+SP MM L + A AGITV
Sbjct: 62 --LDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITV 119
Query: 685 LNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGV 744
+NE+GLDPGIDHL A++ I+ H GGK+++F+SYCGGLPAPE S+NPL YKFSWS RGV
Sbjct: 120 MNEIGLDPGIDHLYAIKTIEEVHAAGGKIKTFLSYCGGLPAPESSDNPLGYKFSWSSRGV 179
Query: 745 LLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIAAE 804
LL ++A + ++ +V ++ AG ELM TA+P PGF+F + NRDS Y + Y I E
Sbjct: 180 LLALRNAASFYKDGKVTNV-AGPELMATAKPYFIYPGFAFVAYPNRDSTPYKERYQI-PE 237
Query: 805 AHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTSDIF 864
A +VRGTLRY+GF ++ + +G L +E P L + P W+E ++ S++
Sbjct: 238 ADNIVRGTLRYQGFPQFIKVLVDIGFLSDEEQPFLKEAIP---WKEATQKIVKASSA--- 291
Query: 865 YENLKNIVADKVGNTGLEALEA----------LGLLNDDIIVQKQNTPIDTLSHFLRQKL 914
+ ++IV+ V N E+ E LG+ +D I + N +DTL L +K+
Sbjct: 292 --SEQDIVSTIVSNATFESTEEQKRIVAGLKWLGIFSDKKITPRGNA-LDTLCATLEEKM 348
Query: 915 NIR 917
Sbjct: 349 QFE 351
|
Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (taxid: 242507) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 0 |
| >sp|O59711|LYS9_SCHPO Saccharopine dehydrogenase [NADP(+), L-glutamate-forming] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lys9 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 214/370 (57%), Gaps = 20/370 (5%)
Query: 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDN 626
++LLLG+G+V+ P +EYL R + +IT+ + N +A +DVN+ +
Sbjct: 3 SILLLGSGFVAHPTLEYLSRRKENNITVACRTLSKAEAFINGIPNSKAIALDVNDEAA-- 60
Query: 627 LSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLN 686
L V DL +SL+PY H V + I+HGK++ T SY++P+M L E A AG +N
Sbjct: 61 LEKAVSEHDLTISLIPYTYHATVMKAAIKHGKHVCTTSYVNPKMAELEEAAIKAGSICMN 120
Query: 687 EVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLL 746
E+G+DPGIDHL A++ I+ H GGK++SF+SYCGGLPAPE S NPL YKFSWS RGVLL
Sbjct: 121 EIGVDPGIDHLYAIKTIEEVHKAGGKIKSFLSYCGGLPAPEDSNNPLGYKFSWSSRGVLL 180
Query: 747 NTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIAAEAH 806
+SAK+ +N ++V+I G +LM TA+P PG++F + NRDS Y + Y I EA
Sbjct: 181 ALRNSAKFYENGKLVEI-DGKDLMETAKPYFIYPGYAFVCYPNRDSTVYQERYQI-PEAE 238
Query: 807 TVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTS---DI 863
T++RGTLRY+GF + + + +G LD L P P + W+E+ ++ +S D+
Sbjct: 239 TIIRGTLRYQGFPEFIHCLVDMGFLDETAQEYLSPEAPALPWKEVTARVIKAESSSEADL 298
Query: 864 FYE--NLKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVDY 921
+ ++ + L L+ LG+ + + + N P+DTL L + L+ Y
Sbjct: 299 IKKISSIHKFKDEDDKKRILNGLKWLGMFSSKPVTPRGN-PLDTLCATLEE-----LMQY 352
Query: 922 EKLVDDEGNR 931
E EG R
Sbjct: 353 E-----EGER 357
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 0 |
| >sp|Q54NG9|SCPDH_DICDI Probable saccharopine dehydrogenase [NADP(+), L-glutamate-forming] OS=Dictyostelium discoideum GN=sdh PE=2 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (622), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 158/454 (34%), Positives = 245/454 (53%), Gaps = 52/454 (11%)
Query: 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVT--NEFGRVEATLIDVNNGG 623
+N+LLLG+G+V++P ++YL + E+ +T+ SL + ++D +T ++ + + +DV N
Sbjct: 2 KNILLLGSGFVAKPALDYLLKREDYFVTIVSLFQNELDSITKGHDTSKFKTIQLDVMNKL 61
Query: 624 SDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT 683
++ L +D V+SL+P LH VA+ CI+H +LVTASY+S +M AL E A AG+
Sbjct: 62 NE-LEEYFPKSDCVISLIPATLHSTVAKLCIKHKTHLVTASYISDDMKALSEEAKEAGVL 120
Query: 684 VLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRG 743
+LNE+GLDPGIDH+ +M+ ID A NGGKV SFVS+CG LP+ EC++NP YKFSWSPRG
Sbjct: 121 LLNELGLDPGIDHMSSMKIIDHAKENGGKVTSFVSWCGALPSTECADNPFGYKFSWSPRG 180
Query: 744 VLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPG----FSFEGFANRDSLRYAQLY 799
VL + SA +L ++PA + +P+ F+G NR+S Y + Y
Sbjct: 181 VLSSATLSANFLWEGHNEEVPANIK-WAVLQPIVVEDSNGVKMEFDGVPNRNSFPYIEQY 239
Query: 800 NI-AAEAHTVVRGTLRYR-GFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLG 857
N+ A + T+ RGTLR++ GF ++A+ +GL + L G I WR + LLG
Sbjct: 240 NLNAKDVTTMFRGTLRWKGGFGIMIRALVAVGLFSTEVDARLAVEGG-ISWRNYLVQLLG 298
Query: 858 LSTSDI------------FYENLKN----------IV---ADKVGNTGLEALEALGLLND 892
+ +D ++E LK I+ +K +E + LGLL+
Sbjct: 299 CNDNDSDLLYCVESTIKEYFEKLKTERDGLQFHFPIIPRDIEKDVQHAVEGFKWLGLLSA 358
Query: 893 DIIVQKQNTPIDTLSHFLRQKLNIR-------------LVDYEKLVDDEGNRVVAFGKYA 939
D V +NTPID+L L +KL+ + +V Y + E + ++ +G
Sbjct: 359 DEKVVNKNTPIDSLCALLEKKLSYKAGERDVVVLEHNFVVQYADRTEKEVSSLICYGIPN 418
Query: 940 GVAG---MVNILHGLGLRLLALGHHTPFMHIGPA 970
G + V + G+ L+A G T +GP
Sbjct: 419 GSSATSLTVGVPVGIATELIADGKTTTRGVVGPV 452
|
Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 0 |
| >sp|P38999|LYS9_YEAST Saccharopine dehydrogenase [NADP(+), L-glutamate-forming] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LYS9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 224/378 (59%), Gaps = 22/378 (5%)
Query: 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSD 625
+NVLLLG+G+V++P+I+ L +++I++T+ + + G +A +DV + +
Sbjct: 3 KNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGS-KAISLDVTDDSA- 60
Query: 626 NLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVL 685
L ++ D+V+SL+PY H +V + I+ ++VT+SY+SP + L AGITV+
Sbjct: 61 -LDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVM 119
Query: 686 NEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVL 745
NE+GLDPGIDHL A++ ID H GGK++SF+SYCGGLPAPE S+NPL YKFSWS RGVL
Sbjct: 120 NEIGLDPGIDHLYAVKTIDEVHRAGGKLKSFLSYCGGLPAPEDSDNPLGYKFSWSSRGVL 179
Query: 746 LNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIAAEA 805
L +SAKY ++ ++ + + +LM TA+P PG++F + NRDS + LY+I EA
Sbjct: 180 LALRNSAKYWKDGKIETV-SSEDLMATAKPYFIYPGYAFVCYPNRDSTLFKDLYHI-PEA 237
Query: 806 HTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLG---LSTSD 862
TV+RGTLRY+GF + ++A+ +G+ LK+ S P I W E + LG S D
Sbjct: 238 ETVIRGTLRYQGFPEFVKALVDMGM--LKDDANEIFSKP-IAWNEALKQYLGAKSTSKED 294
Query: 863 IF--YENLKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVD 920
+ ++ D+ L LGL +D I + N +DTL L + L+
Sbjct: 295 LIASIDSKATWKDDEDRERILSGFAWLGLFSDAKITPRGNA-LDTLCARLEE-----LMQ 348
Query: 921 YEKLVDDEGNRVVAFGKY 938
YE D+E + VV K+
Sbjct: 349 YE---DNERDMVVLQHKF 363
|
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 0 |
| >sp|P38998|LYS1_YEAST Saccharopine dehydrogenase [NAD(+), L-lysine-forming] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LYS1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 167/418 (39%), Gaps = 85/418 (20%)
Query: 9 REDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAII-----QEDIS 63
R + E RAAL P+ VK+L+ G K+ V+ S + + + Y AGAII +
Sbjct: 9 RAETKPLEARAALTPTTVKKLIAKGFKIYVEDSPQSTFNINEYRQAGAIIVPAGSWKTAP 68
Query: 64 EASIIFGVKQVPVDLLLP-NKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDE 122
II G+K++P P + F+H K Q +L ++ + L D E L +D+
Sbjct: 69 RDRIIIGLKEMPETDTFPLVHEHIQFAHCYKDQAGWQNVLMRFIKGHGTLYDLEFLENDQ 128
Query: 123 GNRVVAFGKYAGVAGMVNILHGLGLRLLALGH-HTPFMHIGPAHNYRN-SMMARQAIRDA 180
G RV AFG YAG AG LG+R A H+ + Y N + + +D
Sbjct: 129 GRRVAAFGFYAGFAGA-----ALGVRDWAFKQTHSDDEDLPAVSPYPNEKALVKDVTKDY 183
Query: 181 GYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIY 240
++ G + P ++ G GA ++L KV +N
Sbjct: 184 KEALATG----ARKPTVLIIGALGRCGSGAI-------------DLLHKVGIPDAN---- 222
Query: 241 ACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLT 300
+ + + E +GG +D P A I IN IY S +
Sbjct: 223 ---ILKWDIKETSRGGPFDE------------------IPQADIFINCIYL---SKPIAP 258
Query: 301 LPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISAD---PGGSIEFMNECTTIDTPFC 357
+ + L PN RL + D+SAD P I T + P
Sbjct: 259 FTNMEKLNNPN---------------RRLRTVVDVSADTTNPHNPIPIYTVATVFNKPTV 303
Query: 358 LYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPI 415
L + GP + V SID++P+ LP EA++FF + + P +L++L + P+
Sbjct: 304 LVPTTA--------GPKLSVISIDHLPSLLPREASEFFSHDLLP-SLELLPQRKTAPV 352
|
Catalyzes the NAD(+)-dependent cleavage of saccharopine to L-lysine and 2-oxoglutarate. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 7 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1201 | ||||||
| 332018902 | 1402 | Alpha-aminoadipic semialdehyde synthase, | 0.411 | 0.352 | 0.79 | 0.0 | |
| 383859607 | 942 | PREDICTED: alpha-aminoadipic semialdehyd | 0.412 | 0.525 | 0.791 | 0.0 | |
| 156548972 | 950 | PREDICTED: alpha-aminoadipic semialdehyd | 0.416 | 0.526 | 0.788 | 0.0 | |
| 170028405 | 930 | alpha-aminoadipic semialdehyde synthase, | 0.413 | 0.534 | 0.741 | 0.0 | |
| 340720412 | 919 | PREDICTED: alpha-aminoadipic semialdehyd | 0.412 | 0.539 | 0.784 | 0.0 | |
| 350404583 | 919 | PREDICTED: alpha-aminoadipic semialdehyd | 0.412 | 0.539 | 0.784 | 0.0 | |
| 195434344 | 931 | GK15303 [Drosophila willistoni] gi|19416 | 0.417 | 0.538 | 0.735 | 0.0 | |
| 380017974 | 918 | PREDICTED: LOW QUALITY PROTEIN: alpha-am | 0.415 | 0.543 | 0.774 | 0.0 | |
| 195577377 | 928 | GD22468 [Drosophila simulans] gi|1941905 | 0.416 | 0.538 | 0.734 | 0.0 | |
| 40215478 | 972 | SD02276p [Drosophila melanogaster] | 0.416 | 0.514 | 0.734 | 0.0 |
| >gi|332018902|gb|EGI59448.1| Alpha-aminoadipic semialdehyde synthase, mitochondrial [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/500 (79%), Positives = 447/500 (89%)
Query: 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQED 61
GK+IAIRREDQSVWERRA LAP+NV+RLVRSGVKVIVQPS+RRAYP Q Y AGA++QED
Sbjct: 495 GKIIAIRREDQSVWERRAPLAPANVRRLVRSGVKVIVQPSDRRAYPAQVYQAAGALLQED 554
Query: 62 ISEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD 121
IS AS+IFGVKQVPVD L+PNKTYC FSHTIKAQE+NMPLLDAIL+KNIRL+DYEKL D
Sbjct: 555 ISSASVIFGVKQVPVDQLIPNKTYCFFSHTIKAQESNMPLLDAILEKNIRLLDYEKLTDA 614
Query: 122 EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAG 181
G RVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYR+S MARQAIR AG
Sbjct: 615 NGQRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRDSAMARQAIRGAG 674
Query: 182 YEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYA 241
YEI+LG MPKSIGPLT VFTGSGNVSQG QE+FQELP+EYVPPEML+KVAEHG TKIY
Sbjct: 675 YEIALGAMPKSIGPLTFVFTGSGNVSQGGQEVFQELPHEYVPPEMLRKVAEHGDTTKIYG 734
Query: 242 CEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTL 301
CEVRRR++L+R +G G+D +EY+++P LY S F+ KIAPYAS+IINGIYWAV SPKLLT+
Sbjct: 735 CEVRRRHHLKRKEGDGFDPEEYDQHPELYISTFSKKIAPYASVIINGIYWAVDSPKLLTI 794
Query: 302 PDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDA 361
PDAK LLRP + PWLP S GAP LPHR+LGICDISADPGGSIEFMNECTTIDTPFCLYDA
Sbjct: 795 PDAKYLLRPANTPWLPISVGAPALPHRMLGICDISADPGGSIEFMNECTTIDTPFCLYDA 854
Query: 362 DSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFS 421
D NKDTKSFKGPGVLVCSIDNMPTQLP EATDFFGNL++PYALDI+QSDA KP+ EHNFS
Sbjct: 855 DRNKDTKSFKGPGVLVCSIDNMPTQLPKEATDFFGNLLYPYALDIIQSDAKKPLNEHNFS 914
Query: 422 PAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEY 481
PAV AII SNG+LTP F+YI++LRQ + +SRHKAD + ++S+ V++LGAGYVS PL+EY
Sbjct: 915 PAVHDAIIVSNGKLTPNFEYIQELRQMNQRSRHKADNREQQSKTVVVLGAGYVSAPLVEY 974
Query: 482 LHRDENIHITLGSLLKEDID 501
LHRD+NI + + S LK++ D
Sbjct: 975 LHRDKNIRLIVASQLKDEAD 994
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859607|ref|XP_003705284.1| PREDICTED: alpha-aminoadipic semialdehyde synthase, mitochondrial-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/499 (79%), Positives = 444/499 (88%)
Query: 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDI 62
KVIAIRREDQSVWERRA LAP+NV+RL+R+GVKVIVQPSNRRAYP Q+Y AGA +QEDI
Sbjct: 36 KVIAIRREDQSVWERRAPLAPANVRRLIRAGVKVIVQPSNRRAYPAQSYQAAGASLQEDI 95
Query: 63 SEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDE 122
S AS+IFGVKQVPVD L+ NKTYC FSHTIKAQE+NMPLLDAIL+KNIRL+DYEKL DD+
Sbjct: 96 SSASVIFGVKQVPVDQLISNKTYCFFSHTIKAQESNMPLLDAILEKNIRLLDYEKLTDDK 155
Query: 123 GNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGY 182
G RVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYR+S MARQAIRDAGY
Sbjct: 156 GQRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRDSAMARQAIRDAGY 215
Query: 183 EISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYAC 242
EI+LG MPKSIGPLT +FTGSGNVSQG QE+FQELP+EYVPPEML+KVAEHG TKIY C
Sbjct: 216 EIALGAMPKSIGPLTFIFTGSGNVSQGGQEVFQELPHEYVPPEMLRKVAEHGDTTKIYGC 275
Query: 243 EVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLP 302
EVRRR++LER GGG+D EY+++P Y S F+ KIAPYAS+IINGIYWAV SPKLLT+P
Sbjct: 276 EVRRRHHLERKDGGGFDPNEYDKHPERYISTFSKKIAPYASVIINGIYWAVDSPKLLTIP 335
Query: 303 DAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDAD 362
DAK LLRP + PWLPTS GAP LPHR+LGICDISADPGGSIEFMNECTTIDTPFCLYDAD
Sbjct: 336 DAKYLLRPAYTPWLPTSVGAPALPHRMLGICDISADPGGSIEFMNECTTIDTPFCLYDAD 395
Query: 363 SNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSP 422
NKDTKSFKGPGVLVCSIDNMPTQLP EATDFFGNL++PYALDI++SDA P+EEHNF+P
Sbjct: 396 RNKDTKSFKGPGVLVCSIDNMPTQLPKEATDFFGNLLYPYALDIIRSDARVPLEEHNFTP 455
Query: 423 AVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEYL 482
AV AIIASNG+LTP F+YI+DLR + +S+HKAD +++ VL+LGAGYVS PL+EYL
Sbjct: 456 AVHGAIIASNGQLTPNFEYIQDLRLMNQRSKHKADSTETQNKKVLVLGAGYVSSPLVEYL 515
Query: 483 HRDENIHITLGSLLKEDID 501
HRD IH+ + S LKE+ D
Sbjct: 516 HRDSKIHVVVASQLKEEAD 534
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156548972|ref|XP_001607166.1| PREDICTED: alpha-aminoadipic semialdehyde synthase, mitochondrial-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/501 (78%), Positives = 448/501 (89%), Gaps = 1/501 (0%)
Query: 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQED 61
GKVIAIRREDQSVWERRA LAPSNV+RL+R+GVKVIVQPSNRRAYP +Y AGA +QED
Sbjct: 42 GKVIAIRREDQSVWERRAPLAPSNVRRLIRAGVKVIVQPSNRRAYPAGSYLAAGAQVQED 101
Query: 62 ISEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD 121
IS AS+IFGVKQVP+D L+PNKTYC FSHTIKAQE+NMP+LDAIL KNIRL+DYEKL DD
Sbjct: 102 ISTASVIFGVKQVPIDALIPNKTYCFFSHTIKAQESNMPMLDAILDKNIRLLDYEKLTDD 161
Query: 122 EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAG 181
G R+VAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNS MARQAIRDAG
Sbjct: 162 NGQRLVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSGMARQAIRDAG 221
Query: 182 YEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYA 241
YEI+LG MPKSIGPLT +FTGSGNVSQG QE+FQELP+EYVPPEML+KVAEHG KIYA
Sbjct: 222 YEIALGAMPKSIGPLTFIFTGSGNVSQGGQEVFQELPHEYVPPEMLRKVAEHGDANKIYA 281
Query: 242 CEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTL 301
CEVRRR++LER +GGG+D +EY+++P Y S F+ KIAPYAS+IINGIYWAV SPKLLT+
Sbjct: 282 CEVRRRHHLERKEGGGFDPEEYDQHPERYISTFSKKIAPYASVIINGIYWAVDSPKLLTI 341
Query: 302 PDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDA 361
PDAKNLLRP + PWLP S GAP LPHR+L ICDISADPGGSIEFMNECTTIDTPFCLYDA
Sbjct: 342 PDAKNLLRPAYTPWLPISVGAPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDA 401
Query: 362 DSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFS 421
D NKDTKSFKGPGVLVCSIDNMPTQLP EATDFFG+L+FPYALDI++SDA KP++EHNF+
Sbjct: 402 DRNKDTKSFKGPGVLVCSIDNMPTQLPREATDFFGDLLFPYALDIIRSDAKKPLDEHNFT 461
Query: 422 PAVQAAIIASNGELTPKFKYIEDLRQQ-SVKSRHKADIQTEESRNVLLLGAGYVSRPLIE 480
PAV AIIASNGELTP F+YI++LRQQ +++SRHK + +SR V++LGAGYVS PL+E
Sbjct: 462 PAVHGAIIASNGELTPNFQYIQELRQQNTIRSRHKDNGDVSKSRTVVVLGAGYVSSPLVE 521
Query: 481 YLHRDENIHITLGSLLKEDID 501
YLHRDE++ I +GS K++ D
Sbjct: 522 YLHRDEDLRIIVGSQYKDEAD 542
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170028405|ref|XP_001842086.1| alpha-aminoadipic semialdehyde synthase, mitochondrial [Culex quinquefasciatus] gi|167874241|gb|EDS37624.1| alpha-aminoadipic semialdehyde synthase, mitochondrial [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/502 (74%), Positives = 435/502 (86%)
Query: 1 TGKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQE 60
+GKVIAIRREDQSVWERRA+ +P VK+L++ GVKVIVQPSNRRAYP+QAY NAGA +QE
Sbjct: 22 SGKVIAIRREDQSVWERRASFSPVIVKKLIKQGVKVIVQPSNRRAYPMQAYLNAGATVQE 81
Query: 61 DISEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVD 120
DISEAS+IFGVKQVPVD L+P KTYC FSHTIKAQE+NMPLLDA L+KNIRL+DYEKL+D
Sbjct: 82 DISEASVIFGVKQVPVDALIPQKTYCFFSHTIKAQESNMPLLDACLEKNIRLIDYEKLMD 141
Query: 121 DEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDA 180
G R+VAFGKYAGVAGM+NILHG+GLR+LALGHHTPFMH+GPAHNYRNS MARQA+RD
Sbjct: 142 RNGQRLVAFGKYAGVAGMINILHGIGLRMLALGHHTPFMHVGPAHNYRNSSMARQAVRDC 201
Query: 181 GYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIY 240
GYEI+LG MPKSIGPLT +FTGSGNVSQGAQE+FQELP E+VPP+ L+KVAEHGS K+Y
Sbjct: 202 GYEIALGMMPKSIGPLTFIFTGSGNVSQGAQEVFQELPIEFVPPDSLRKVAEHGSQNKLY 261
Query: 241 ACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLT 300
CEV R ++LER +GGG+D EY++ P Y S F KIAPYAS+IINGIYWAVGSPKL+T
Sbjct: 262 GCEVSRADHLERREGGGFDPVEYDQYPERYISTFNKKIAPYASVIINGIYWAVGSPKLIT 321
Query: 301 LPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYD 360
+PDAKNLLRP PWLPTS GAP LPHR+L ICDISADPGGSIEFMNECTTIDTPFCLYD
Sbjct: 322 IPDAKNLLRPADTPWLPTSRGAPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYD 381
Query: 361 ADSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNF 420
AD NKD KSFKGPGVLVCSIDNMPTQLP E+TDFFG L++PYALDILQSDA+KP+E+H F
Sbjct: 382 ADRNKDQKSFKGPGVLVCSIDNMPTQLPRESTDFFGELLYPYALDILQSDATKPLEDHKF 441
Query: 421 SPAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIE 480
V+ AII SNG+LT F+YI +LR+ + +SRHK++ + + VL+LGAG+VS PL+E
Sbjct: 442 CQPVEGAIICSNGQLTTGFEYINELRESNNRSRHKSEGSSVGKKRVLVLGAGFVSAPLVE 501
Query: 481 YLHRDENIHITLGSLLKEDIDK 502
YLHR+ N+ I +GS +KE+ D+
Sbjct: 502 YLHREGNVSIKVGSQIKEEADR 523
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340720412|ref|XP_003398633.1| PREDICTED: alpha-aminoadipic semialdehyde synthase, mitochondrial-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/500 (78%), Positives = 443/500 (88%)
Query: 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQED 61
GK+IAIRREDQSVWERRA LAP+NV++L+R+GVKVIVQPSNRRAYP AY AGAI+QED
Sbjct: 12 GKIIAIRREDQSVWERRAPLAPANVRQLIRAGVKVIVQPSNRRAYPAHAYQAAGAILQED 71
Query: 62 ISEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD 121
IS AS+IFGVKQVPVD L+ N+TYC FSHTIKAQE+NMPLLDAIL+KNIRL+DYEKL DD
Sbjct: 72 ISPASVIFGVKQVPVDQLISNRTYCFFSHTIKAQESNMPLLDAILEKNIRLLDYEKLTDD 131
Query: 122 EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAG 181
G RVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYR+S MARQAIRDAG
Sbjct: 132 NGQRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRDSAMARQAIRDAG 191
Query: 182 YEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYA 241
YEI+LG MPKSIGPLT +FTGSGNVSQG QE+FQELP+EYVPPEML+KVAEHG TKIY
Sbjct: 192 YEIALGAMPKSIGPLTFIFTGSGNVSQGGQEVFQELPHEYVPPEMLKKVAEHGDTTKIYG 251
Query: 242 CEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTL 301
CEVRRR++LER GGG+D E +++P Y S F+ KIAPYAS+IINGIYWAV SPKLLT+
Sbjct: 252 CEVRRRHHLERKDGGGFDSDECDKHPERYISTFSKKIAPYASVIINGIYWAVDSPKLLTI 311
Query: 302 PDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDA 361
PDAK LLRP + PWLP+S GAP LPHR+L ICDISADPGGSIEFMNECTTIDTPFCLYDA
Sbjct: 312 PDAKYLLRPAYTPWLPSSVGAPSLPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDA 371
Query: 362 DSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFS 421
D NKDTKSFKGPGVLVCSIDNMPTQLP E+TDFFGNL++PYALDI+QSDA P+EEHNFS
Sbjct: 372 DRNKDTKSFKGPGVLVCSIDNMPTQLPKESTDFFGNLLYPYALDIIQSDAKAPLEEHNFS 431
Query: 422 PAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEY 481
PAV AIIASNG LTP F+YI++LR + + RHKAD + +S+ V++LGAG+VS PL+EY
Sbjct: 432 PAVHDAIIASNGRLTPNFEYIQELRLLNHRCRHKADNREAQSKKVVVLGAGHVSAPLVEY 491
Query: 482 LHRDENIHITLGSLLKEDID 501
LHRD NIH+T+ S LKE+ D
Sbjct: 492 LHRDSNIHLTVASQLKEEAD 511
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350404583|ref|XP_003487153.1| PREDICTED: alpha-aminoadipic semialdehyde synthase, mitochondrial-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/500 (78%), Positives = 443/500 (88%)
Query: 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQED 61
GK+IAIRREDQSVWERRA LAP+NV++L+R+GVKVIVQPSNRRAYP AY AGAI+QED
Sbjct: 12 GKIIAIRREDQSVWERRAPLAPANVRQLIRAGVKVIVQPSNRRAYPAHAYQAAGAILQED 71
Query: 62 ISEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD 121
IS AS+IFGVKQVPVD L+ N+TYC FSHTIKAQE+NMPLLDAIL+KNIRL+DYEKL DD
Sbjct: 72 ISPASVIFGVKQVPVDQLISNRTYCFFSHTIKAQESNMPLLDAILEKNIRLLDYEKLTDD 131
Query: 122 EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAG 181
G RVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYR+S MARQAIRDAG
Sbjct: 132 NGQRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRDSAMARQAIRDAG 191
Query: 182 YEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYA 241
YEI+LG MPKSIGPLT +FTGSGNVSQG QE+FQELP+EYVPPEML+KVAEHG TKIY
Sbjct: 192 YEIALGAMPKSIGPLTFIFTGSGNVSQGGQEVFQELPHEYVPPEMLKKVAEHGDTTKIYG 251
Query: 242 CEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTL 301
CEVRRR++LER GGG+D E +++P Y S F+ KIAPYAS+IINGIYWAV SPKLLT+
Sbjct: 252 CEVRRRHHLERKDGGGFDSDECDKHPERYISTFSKKIAPYASVIINGIYWAVDSPKLLTI 311
Query: 302 PDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDA 361
PDAK LLRP + PWLP+S GAP LPHR+L ICDISADPGGSIEFMNECTTIDTPFCLYDA
Sbjct: 312 PDAKYLLRPAYTPWLPSSVGAPSLPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDA 371
Query: 362 DSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFS 421
D NKDTKSFKGPGVLVCSIDNMPTQLP E+TDFFGNL++PYALDI+QSDA P+EEHNFS
Sbjct: 372 DRNKDTKSFKGPGVLVCSIDNMPTQLPKESTDFFGNLLYPYALDIIQSDAKAPLEEHNFS 431
Query: 422 PAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEY 481
PAV AIIASNG LTP F+YI++LR + + RHKAD + +S+ V++LGAG+VS PL+EY
Sbjct: 432 PAVHDAIIASNGRLTPNFEYIQELRLLNHRCRHKADNREAQSKKVVVLGAGHVSAPLVEY 491
Query: 482 LHRDENIHITLGSLLKEDID 501
LHRD NIH+T+ S LKE+ D
Sbjct: 492 LHRDNNIHLTVASQLKEEAD 511
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195434344|ref|XP_002065163.1| GK15303 [Drosophila willistoni] gi|194161248|gb|EDW76149.1| GK15303 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/502 (73%), Positives = 439/502 (87%), Gaps = 1/502 (0%)
Query: 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQED 61
G+VIAIRREDQSVWERRA P++V++LV+ G+KVIVQPSNRRAYP+QAY AGA IQED
Sbjct: 24 GRVIAIRREDQSVWERRAPFGPTHVQKLVKQGIKVIVQPSNRRAYPMQAYMQAGAQIQED 83
Query: 62 ISEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD 121
IS+AS+IFGVKQVP+D L+P KTYC FSHTIKAQE+NM LLDAIL+K IRL+DYE+++D+
Sbjct: 84 ISDASVIFGVKQVPIDSLIPGKTYCFFSHTIKAQESNMALLDAILEKEIRLIDYERIIDE 143
Query: 122 EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAG 181
G+R VAFGKYAGVAGMVNILHG+GLRLLALGHHTPFMHIGPAHNYRNS MARQAIRD G
Sbjct: 144 RGSRQVAFGKYAGVAGMVNILHGIGLRLLALGHHTPFMHIGPAHNYRNSSMARQAIRDCG 203
Query: 182 YEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYA 241
YEISLG MPKSIGPLT VFTGSGNVSQGAQE+F ELP EYVPPEML+KVAEHG+ K+YA
Sbjct: 204 YEISLGMMPKSIGPLTFVFTGSGNVSQGAQEVFSELPVEYVPPEMLRKVAEHGNQNKLYA 263
Query: 242 CEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTL 301
CEV R ++LER +GGG+D +EY+E P LY S F+ KIAPYAS+I+NGIYWAVGSPKL+++
Sbjct: 264 CEVSRSDHLERREGGGFDAKEYDEFPELYISTFSQKIAPYASVIVNGIYWAVGSPKLISI 323
Query: 302 PDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDA 361
PDAKNLLRP + PWLPTS G+P LPHR+L ICDISADPGGSIEFMNECTTIDTPFCLYDA
Sbjct: 324 PDAKNLLRPANTPWLPTSKGSPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDA 383
Query: 362 DSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFS 421
D NKDTKSFKGPGVLVCSIDNMPTQLP E+TD FG L+ P+ DI++SDA KP++E NFS
Sbjct: 384 DRNKDTKSFKGPGVLVCSIDNMPTQLPRESTDLFGELLTPHVHDIIKSDAKKPLKEENFS 443
Query: 422 PAVQAAIIASNGELTPKFKYIEDLR-QQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIE 480
+Q+AIIASNG+LT F+YI++LR Q+ +SRHK + + E ++ VL+LGAG VS PL+E
Sbjct: 444 YPIQSAIIASNGQLTESFQYIQELRDSQNNRSRHKMEGRNESNKKVLVLGAGMVSAPLVE 503
Query: 481 YLHRDENIHITLGSLLKEDIDK 502
+LHR++++ IT+ S +KE+ D+
Sbjct: 504 WLHREKDVSITVCSQVKEEADR 525
|
Source: Drosophila willistoni Species: Drosophila willistoni Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380017974|ref|XP_003692916.1| PREDICTED: LOW QUALITY PROTEIN: alpha-aminoadipic semialdehyde synthase, mitochondrial-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/500 (77%), Positives = 441/500 (88%), Gaps = 1/500 (0%)
Query: 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQED 61
GK+IAIRREDQSVWERRA LAP+NV+RL+R+GVKVIVQPSNRRAYP +Y AGAI+QED
Sbjct: 12 GKIIAIRREDQSVWERRAPLAPANVRRLIRAGVKVIVQPSNRRAYPAHSYQAAGAILQED 71
Query: 62 ISEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD 121
IS AS+IFGVKQVPVD L+ NKTYC FSHTIKAQE+NMPLLDAIL+KNIRLVDYEKL D
Sbjct: 72 ISSASVIFGVKQVPVDQLISNKTYCFFSHTIKAQESNMPLLDAILEKNIRLVDYEKLTDI 131
Query: 122 EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAG 181
G RVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYR+S MARQAIRDAG
Sbjct: 132 NGQRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRDSSMARQAIRDAG 191
Query: 182 YEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYA 241
YEI+LG MPKSIGPLT +FTGSGNVSQG QE+FQELP+EYVPPEML+KVAEHG TKIY
Sbjct: 192 YEIALGAMPKSIGPLTFIFTGSGNVSQGGQEVFQELPHEYVPPEMLKKVAEHGDTTKIYG 251
Query: 242 CEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTL 301
CEVRRR++LER GGG+D +E +++P Y S F+ KIAPYAS+IINGIYWAV SPKL+T+
Sbjct: 252 CEVRRRHHLERXDGGGFDSEECDKHPERYISTFSKKIAPYASVIINGIYWAVDSPKLVTI 311
Query: 302 PDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDA 361
PDAK LLRP + PWLP+S GAP LPHR+L ICDISADPGGSIEFMNECTTIDTPFCLYDA
Sbjct: 312 PDAKYLLRPAYTPWLPSSVGAPSLPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDA 371
Query: 362 DSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFS 421
D NKDTKSFKGPGVLVCSIDNMPTQLP E+TDFFGNL++PYALDI+QSDA P+EEHNF+
Sbjct: 372 DRNKDTKSFKGPGVLVCSIDNMPTQLPKESTDFFGNLLYPYALDIIQSDAKAPLEEHNFN 431
Query: 422 PAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEY 481
PAV AIIASNG LTP F+YI++LR + + +HKAD + +++ V++LGAG+VS PL+EY
Sbjct: 432 PAVHGAIIASNGRLTPNFEYIQELRLLNHRCKHKADDKA-QTKKVVVLGAGHVSGPLVEY 490
Query: 482 LHRDENIHITLGSLLKEDID 501
LHRD NI + + S LKE+ D
Sbjct: 491 LHRDNNIRLIVASQLKEEAD 510
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195577377|ref|XP_002078547.1| GD22468 [Drosophila simulans] gi|194190556|gb|EDX04132.1| GD22468 [Drosophila simulans] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/501 (73%), Positives = 436/501 (87%), Gaps = 1/501 (0%)
Query: 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDI 62
+VIAIRREDQSVWERRA P++V++LV+ VKVIVQPSNRRAYP+QAY AGA IQEDI
Sbjct: 22 RVIAIRREDQSVWERRAPFGPTHVQKLVKQNVKVIVQPSNRRAYPMQAYMQAGAHIQEDI 81
Query: 63 SEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDE 122
S+AS+IFGVKQVP+D L+P KTYC FSHTIKAQE+NMPLLDAIL+K IRL+DYE+++D+
Sbjct: 82 SDASVIFGVKQVPIDALIPGKTYCFFSHTIKAQESNMPLLDAILEKKIRLIDYERIIDER 141
Query: 123 GNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGY 182
G R VAFGKYAGVAGMVNILHG+GLRLLALGHHTPFMHIGPAHNYRNS MARQAIRD GY
Sbjct: 142 GARQVAFGKYAGVAGMVNILHGIGLRLLALGHHTPFMHIGPAHNYRNSSMARQAIRDCGY 201
Query: 183 EISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYAC 242
EISLG MPKSIGPLT VFTGSGNVSQGAQE+F ELP EYVPPEML+KVAEHG+ K+Y C
Sbjct: 202 EISLGMMPKSIGPLTFVFTGSGNVSQGAQEVFSELPIEYVPPEMLRKVAEHGNQNKLYGC 261
Query: 243 EVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLP 302
EV R ++LER +GGG+D +EY+E P Y S F++KIAPYAS+I+NGIYWAVGSPKL+++P
Sbjct: 262 EVSRSDHLERREGGGFDAKEYDEFPERYISTFSTKIAPYASVIVNGIYWAVGSPKLISIP 321
Query: 303 DAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDAD 362
DAKNLLRP + PWLPTS G+P LPHR+L ICDISADPGGSIEFMNECTTIDTPFCLYDAD
Sbjct: 322 DAKNLLRPANTPWLPTSKGSPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDAD 381
Query: 363 SNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSP 422
NKDTKSFKGPGVLVCSIDNMPTQLP E+TD FG L+ P+ DI++SDA KP+ E NFS
Sbjct: 382 RNKDTKSFKGPGVLVCSIDNMPTQLPRESTDLFGELLAPHVHDIIKSDAKKPLAEENFSY 441
Query: 423 AVQAAIIASNGELTPKFKYIEDLRQ-QSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEY 481
+Q+AIIASNG+LT F+YI++LR+ QS +SRHK + ++E + VL+LGAG VS PL+E+
Sbjct: 442 PIQSAIIASNGQLTEGFQYIQELRESQSHRSRHKMEGRSESDKKVLVLGAGMVSAPLVEW 501
Query: 482 LHRDENIHITLGSLLKEDIDK 502
LHR++++ IT+ S +KE+ D+
Sbjct: 502 LHREKDVSITVCSQVKEEADR 522
|
Source: Drosophila simulans Species: Drosophila simulans Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|40215478|gb|AAR82744.1| SD02276p [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/501 (73%), Positives = 435/501 (86%), Gaps = 1/501 (0%)
Query: 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDI 62
+VIAIRREDQSVWERRA P++V++LV+ VKVIVQPSNRRAYP+QAY AGA IQEDI
Sbjct: 66 RVIAIRREDQSVWERRAPFGPTHVQKLVKQNVKVIVQPSNRRAYPMQAYMQAGAHIQEDI 125
Query: 63 SEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDE 122
S+AS+IFGVKQVP+D L+P KTYC FSHTIKAQE+NMPLLDAIL+K IRL+DYE+++D+
Sbjct: 126 SDASVIFGVKQVPIDALIPGKTYCFFSHTIKAQESNMPLLDAILEKKIRLIDYERIIDER 185
Query: 123 GNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGY 182
G R VAFGKYAGVAGMVNILHG+GLRLLALGHHTPFMHIGPAHNYRNS MARQAIRD GY
Sbjct: 186 GARQVAFGKYAGVAGMVNILHGIGLRLLALGHHTPFMHIGPAHNYRNSSMARQAIRDCGY 245
Query: 183 EISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYAC 242
EISLG MPKSIGPLT VFTGSGNVSQGAQE+F ELP EYVPPEML+KVAEHG+ K+Y C
Sbjct: 246 EISLGMMPKSIGPLTFVFTGSGNVSQGAQEVFSELPIEYVPPEMLRKVAEHGNQNKLYGC 305
Query: 243 EVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLP 302
EV R ++LER +GGG+D +EY+E P Y S F++KIAPYAS+I+NGIYWAVGSPKL+++P
Sbjct: 306 EVSRSDHLERREGGGFDAKEYDEFPERYISTFSTKIAPYASVIVNGIYWAVGSPKLISIP 365
Query: 303 DAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDAD 362
DAKNLLRP + PWLPTS G+P LPHR+L ICDISADPGGSIEFMNECTTIDTPFCLYDAD
Sbjct: 366 DAKNLLRPANTPWLPTSKGSPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDAD 425
Query: 363 SNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSP 422
NKDTKSFKGPGVLVCSIDNMPTQLP E+TD FG L+ P+ DI++SDA KP+ E NFS
Sbjct: 426 RNKDTKSFKGPGVLVCSIDNMPTQLPRESTDLFGELLAPHVHDIIKSDAKKPLAEENFSY 485
Query: 423 AVQAAIIASNGELTPKFKYIEDLRQ-QSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEY 481
+Q+AIIASNG+LT F+YI++LR+ QS +SRHK + +E + VL+LGAG VS PL+E+
Sbjct: 486 PIQSAIIASNGQLTEGFQYIQELRESQSHRSRHKMEGSSESDKKVLVLGAGMVSAPLVEW 545
Query: 482 LHRDENIHITLGSLLKEDIDK 502
LHR++++ IT+ S +KE+ D+
Sbjct: 546 LHREKDVSITVCSQVKEEADR 566
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1201 | ||||||
| MGI|MGI:1353573 | 926 | Aass "aminoadipate-semialdehyd | 0.404 | 0.524 | 0.554 | 1.3e-239 | |
| RGD|1310811 | 926 | Aass "aminoadipate-semialdehyd | 0.404 | 0.524 | 0.552 | 1.3e-237 | |
| FB|FBgn0025687 | 928 | LKR "lysine ketoglutarate redu | 0.416 | 0.538 | 0.708 | 9.9e-229 | |
| WB|WBGene00019819 | 934 | R02D3.1 [Caenorhabditis elegan | 0.408 | 0.525 | 0.525 | 7.4e-222 | |
| UNIPROTKB|D4A608 | 925 | D4A608 "Uncharacterized protei | 0.402 | 0.523 | 0.454 | 7.2e-202 | |
| UNIPROTKB|D4ACE9 | 925 | D4ACE9 "Uncharacterized protei | 0.402 | 0.523 | 0.450 | 1.1e-200 | |
| UNIPROTKB|Q6GN76 | 927 | aass "MGC82978 protein" [Xenop | 0.410 | 0.531 | 0.581 | 1.8e-170 | |
| UNIPROTKB|A8E657 | 926 | AASS "Alpha-aminoadipic semial | 0.437 | 0.566 | 0.533 | 4.9e-168 | |
| UNIPROTKB|F1PEA3 | 915 | AASS "Uncharacterized protein" | 0.436 | 0.572 | 0.534 | 1.7e-167 | |
| UNIPROTKB|F1MY13 | 926 | AASS "Alpha-aminoadipic semial | 0.437 | 0.566 | 0.530 | 5.6e-167 |
| MGI|MGI:1353573 Aass "aminoadipate-semialdehyde synthase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1413 (502.5 bits), Expect = 1.3e-239, Sum P(2) = 1.3e-239
Identities = 273/492 (55%), Positives = 354/492 (71%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS 63
V+A+RRED + WERRA LAP ++K + + G KV++QPSNRRA + Y AG I+QEDI+
Sbjct: 25 VMALRREDVNAWERRAPLAPKHIKGITKLGYKVLIQPSNRRAIHDKEYVRAGGILQEDIT 84
Query: 64 EASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEG 123
EA +I GVK+ P + L+ KTY FSHTIKAQE NM LLD +L++ IRL+DYEK+VD G
Sbjct: 85 EACLILGVKRPPEEKLMSKKTYAFFSHTIKAQEANMNLLDEVLKQEIRLIDYEKMVDHRG 144
Query: 124 NRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNSMMARQAIRDAGYE 183
+R+VAFG++AGVAGM+NI TPFMH+G AHNYRNS A QA+RDAGYE
Sbjct: 145 SRIVAFGQWAGVAGMINILHGMGLRLLALGHHTPFMHLGMAHNYRNSSQAVQAVRDAGYE 204
Query: 184 ISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE 243
ISLG MPKSIGPLT VFTG+GNVS+GAQE+F ELP EYV P L++V++ G K+Y
Sbjct: 205 ISLGLMPKSIGPLTFVFTGTGNVSKGAQEVFNELPCEYVEPHELREVSKTGDLRKVYGTV 264
Query: 244 VRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPD 303
+ R ++L R G YD EY + P Y S F + IAPY + +INGIYW +P+LLT D
Sbjct: 265 LSRHHHLVRKTDGVYDPVEYEKYPERYTSRFNTDIAPYTTCLINGIYWEQNTPRLLTRQD 324
Query: 304 AKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADS 363
A++LL P +P +G P LPH+L+ ICDISAD GGSI+FM ECTTI+ PFC+YDAD
Sbjct: 325 AQSLLVPVKSSVVPV-EGCPELPHKLVAICDISADTGGSIDFMTECTTIERPFCMYDADQ 383
Query: 364 NKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPA 423
S +G G+L+CSIDN+P QLP+EAT++FG++++PY ++L SDAS+P+E NFSP
Sbjct: 384 QIIHDSVEGSGILMCSIDNLPAQLPIEATEYFGDMLYPYVEEMLLSDASQPLESQNFSPV 443
Query: 424 VQAAIIASNGELTPKFKYIEDLRQQSVKSRHKAD-IQTEESRNVLLLGAGYVSRPLIEYL 482
V+ A+I SNG LT K+KYI+ LR+ SR + + + VL+LG+GYVS P++EYL
Sbjct: 444 VRDAVITSNGLLTDKYKYIQKLRE----SRERIQFLSMSTKKKVLVLGSGYVSGPVLEYL 499
Query: 483 HRDENIHITLGS 494
RD NI ITLGS
Sbjct: 500 SRDNNIEITLGS 511
|
|
| RGD|1310811 Aass "aminoadipate-semialdehyde synthase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1404 (499.3 bits), Expect = 1.3e-237, Sum P(2) = 1.3e-237
Identities = 272/492 (55%), Positives = 353/492 (71%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS 63
V+A+RRED + WERRA LAP ++K + + G KV++QPSNRRA + Y AG I+QEDI+
Sbjct: 25 VMALRREDVNAWERRAPLAPKHIKGITKLGYKVLIQPSNRRAIHDKEYVRAGGILQEDIT 84
Query: 64 EASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEG 123
EA +I GVK+ P + L+ KTY FSHTIKAQE NM LLD +L++ IRL+DYEK+VD G
Sbjct: 85 EACLILGVKRPPEEKLMSKKTYAFFSHTIKAQEANMSLLDEVLKQEIRLIDYEKMVDHRG 144
Query: 124 NRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNSMMARQAIRDAGYE 183
+R+VAFG +AGVAGM+NI TPFMH+G AHNYRNS A QA+RDAGYE
Sbjct: 145 SRIVAFGHWAGVAGMINILHGMGLRLLALGHHTPFMHLGMAHNYRNSSQAVQAVRDAGYE 204
Query: 184 ISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE 243
ISLG MPKSIGPLT VFTG+GNVS+GAQE+F ELP EYV P L++V++ G K+Y
Sbjct: 205 ISLGLMPKSIGPLTFVFTGTGNVSKGAQEVFNELPCEYVEPHELKEVSKTGDLRKVYGTV 264
Query: 244 VRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPD 303
+ R ++L R G YD EY + P Y S F + IAPY + +INGIYW +P+LLT D
Sbjct: 265 LSRHHHLVRKTDGVYDPVEYEKYPERYISRFNADIAPYTTCLINGIYWEQNTPRLLTRQD 324
Query: 304 AKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADS 363
A++LL P +P +G P LPH+L+ ICDISAD GGSI+FM ECTTI+ PFC+YDAD
Sbjct: 325 AQSLLVPVKSSVVPV-EGCPELPHKLVAICDISADTGGSIDFMTECTTIERPFCMYDADQ 383
Query: 364 NKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPA 423
+ S +G G+L+CSIDN+P QLP+EAT++FG++++PY ++L SDAS+P+E NFSP
Sbjct: 384 HIIHDSVEGSGILMCSIDNLPAQLPIEATEYFGDMLYPYVEEMLLSDASQPLESQNFSPV 443
Query: 424 VQAAIIASNGELTPKFKYIEDLRQQSVKSRHKAD-IQTEESRNVLLLGAGYVSRPLIEYL 482
V+ A+I SNG LT K+KYI+ LR+ SR + + + VL+LG+GYVS P++EYL
Sbjct: 444 VRDAVITSNGLLTDKYKYIQKLRE----SRERIQFLSMSTKKKVLVLGSGYVSGPVLEYL 499
Query: 483 HRDENIHITLGS 494
R NI ITLGS
Sbjct: 500 SRGNNIEITLGS 511
|
|
| FB|FBgn0025687 LKR "lysine ketoglutarate reductase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1901 (674.2 bits), Expect = 9.9e-229, Sum P(2) = 9.9e-229
Identities = 355/501 (70%), Positives = 421/501 (84%)
Query: 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDI 62
+VIAIRREDQSVWERRA P++V++LV+ VKVIVQPSNRRAYP+QAY AGA IQEDI
Sbjct: 22 RVIAIRREDQSVWERRAPFGPTHVQKLVKQNVKVIVQPSNRRAYPMQAYMQAGAHIQEDI 81
Query: 63 SEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDE 122
S+AS+IFGVKQVP+D L+P KTYC FSHTIKAQE+NMPLLDAIL+K IRL+DYE+++D+
Sbjct: 82 SDASVIFGVKQVPIDALIPGKTYCFFSHTIKAQESNMPLLDAILEKKIRLIDYERIIDER 141
Query: 123 GNRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNSMMARQAIRDAGY 182
G R VAFGKYAGVAGMVNI TPFMHIGPAHNYRNS MARQAIRD GY
Sbjct: 142 GARQVAFGKYAGVAGMVNILHGIGLRLLALGHHTPFMHIGPAHNYRNSSMARQAIRDCGY 201
Query: 183 EISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYAC 242
EISLG MPKSIGPLT VFTGSGNVSQGAQE+F ELP EYVPPEML+KVAEHG+ K+Y C
Sbjct: 202 EISLGMMPKSIGPLTFVFTGSGNVSQGAQEVFSELPIEYVPPEMLRKVAEHGNQNKLYGC 261
Query: 243 EVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLP 302
EV R ++LER +GGG+D +EY+E P Y S F++KIAPYAS+I+NGIYWAVGSPKL+++P
Sbjct: 262 EVSRSDHLERREGGGFDAKEYDEFPERYISTFSTKIAPYASVIVNGIYWAVGSPKLISIP 321
Query: 303 DAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDAD 362
DAKNLLRP + PWLPTS G+P LPHR+L ICDISADPGGSIEFMNECTTIDTPFCLYDAD
Sbjct: 322 DAKNLLRPANTPWLPTSKGSPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDAD 381
Query: 363 SNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSP 422
NKDTKSFKGPGVLVCSIDNMPTQLP E+TD FG L+ P+ DI++SDA KP+ E NFS
Sbjct: 382 RNKDTKSFKGPGVLVCSIDNMPTQLPRESTDLFGELLAPHVHDIIKSDAKKPLAEENFSY 441
Query: 423 AVQAAIIASNGELTPKFKYIEDLRQ-QSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEY 481
+Q+AIIASNG+LT F+YI++LR+ QS +SRHK + +E + VL+LGAG VS PL+E+
Sbjct: 442 PIQSAIIASNGQLTEGFQYIQELRESQSHRSRHKMEGSSESDKKVLVLGAGMVSAPLVEW 501
Query: 482 LHRDENIHITLGSLLKEDIDK 502
LHR++++ IT+ S +KE+ D+
Sbjct: 502 LHREKDVSITVCSQVKEEADR 522
|
|
| WB|WBGene00019819 R02D3.1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 1352 (481.0 bits), Expect = 7.4e-222, Sum P(2) = 7.4e-222
Identities = 262/499 (52%), Positives = 346/499 (69%)
Query: 5 IAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDISE 64
I IRRE + WERRA LAP++VKRL +SGV V++QPSNRRAYP+Q Y +AGAI++ED+SE
Sbjct: 32 IGIRRETVNSWERRAPLAPTHVKRLTKSGVNVLIQPSNRRAYPIQDYISAGAIVREDLSE 91
Query: 65 ASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGN 124
A II VK VP+D L+PNKTY FSHTIKAQ+ NM +LD ILQ+NIRL+DYEK+ DD+G
Sbjct: 92 AHIIMSVKSVPIDQLIPNKTYAFFSHTIKAQQDNMEMLDTILQRNIRLLDYEKICDDKGK 151
Query: 125 RVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNSMMARQAIRDAGYEI 184
R+V FGK+AG AG ++I TPF+H+G AHNY +S MA A+RD GYEI
Sbjct: 152 RLVMFGKWAGNAGFIDILHGIGLRLLALGHNTPFLHMGLAHNYNDSHMAINALRDIGYEI 211
Query: 185 SLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEV 244
+L MP+S+GPL VFTGSGNVSQGA+E+F+ LP+EYV L KVA+ G K+Y C V
Sbjct: 212 ALDRMPRSLGPLIFVFTGSGNVSQGARELFEHLPHEYVDVATLPKVAQKGQLNKVYGCVV 271
Query: 245 RRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDA 304
R+++ GG +D +E+ + P Y S FA++IAPYAS+IING+YW SP+L+T+PDA
Sbjct: 272 TRKDHFVPKHGGPFDKKEFEQFPDRYTSKFATEIAPYASVIINGVYWDAQSPRLITIPDA 331
Query: 305 KNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSN 364
KNLL P P G P LPH L+ +CDISADPGGS+EFM ECTTID PF +YDAD N
Sbjct: 332 KNLLTPVQRYDTP---GCPTLPHHLIALCDISADPGGSVEFMRECTTIDKPFAIYDADFN 388
Query: 365 KDTKSFKGP-GVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPA 423
+ SF G LVCSIDNMP Q+P+EAT+ FGNL++P+ D+L + + +
Sbjct: 389 TSSDSFDAASGCLVCSIDNMPAQMPIEATEQFGNLLYPWLWDLLNTSNDQHFDRLQCRTE 448
Query: 424 VQAAIIASNGELTPKFKYIEDLRQQ---SVKSRHKADIQTEESRNVLLLGAGYVSRPLIE 480
++ AII G+LTP F+YI LR+ S + + T + R VLLLGAG VS P +
Sbjct: 449 IKNAIITDQGKLTPNFEYIAQLRKDKAASASANSRVMGGTTDKR-VLLLGAGMVSGPFAD 507
Query: 481 YLHRDENIHITLGSLLKED 499
+ + +++++T+ + + D
Sbjct: 508 FYSKQKDVNLTVATESQRD 526
|
|
| UNIPROTKB|D4A608 D4A608 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1066 (380.3 bits), Expect = 7.2e-202, Sum P(2) = 7.2e-202
Identities = 224/493 (45%), Positives = 314/493 (63%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRA-YPVQAYANAGAIIQEDI 62
V+A+RRED + WERRA LAP ++K + + G KV++QPSNRRA + + G ++ D+
Sbjct: 25 VMALRREDVNAWERRAPLAPKHIKGITKLGYKVLIQPSNRRAIHDKPRLSRGGGEMKSDV 84
Query: 63 SEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDE 122
+ +I G+ + ++LL + + FSH + E N L+ IL++ RL YE+ D
Sbjct: 85 TSKDLILGMIKPMEEILLSSFSVAYFSHMCRHLEKNGNSLEGILRQEKRLTSYERR-DFL 143
Query: 123 GNRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNSMMARQAIRDAGY 182
+R+++F V+GM+NI TPFMH+G AHNYRNS A QA+RDAGY
Sbjct: 144 LSRLMSFYCSGSVSGMINILHGMGLRLLALGHHTPFMHLGMAHNYRNSSQAVQAVRDAGY 203
Query: 183 EISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYAC 242
EISLG MPKSIGPLT VFTG+GNVS+GAQE+F ELP EYV P L++V++ G K+Y
Sbjct: 204 EISLGLMPKSIGPLTFVFTGTGNVSKGAQEVFNELPCEYVEPHELKEVSKTGDLRKVYGT 263
Query: 243 EVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLP 302
+ R ++L R G YD EY + P Y S F + IAPY + +INGIYW +P+LLT
Sbjct: 264 VLSRHHHLVRKTDGVYDPVEYEKYPERYISRFNADIAPYTTCLINGIYWEQNTPRLLTRQ 323
Query: 303 DAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDAD 362
DA++LL P +P +G P LPH + C I+ DPG S+ ++I T F L +
Sbjct: 324 DAQSLLVPVKSSVVPV-EGCPELPHNFVLFCLIT-DPGTSMWTYCRMSSIQTNFLLLQKN 381
Query: 363 SNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSP 422
+ +G G+L+CSIDN+P QLP+EAT++FG++++PY ++L SDAS+P+E NFSP
Sbjct: 382 KRLLLDNVEGSGILMCSIDNLPAQLPIEATEYFGDMLYPYVEEMLLSDASQPLESQNFSP 441
Query: 423 AVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKAD-IQTEESRNVLLLGAGYVSRPLIEY 481
V+ A+I SNG LT K+KYI+ LR+ SR + + + VL+LG+GYVS P++EY
Sbjct: 442 VVRDAVITSNGLLTDKYKYIQKLRE----SRERIQFLSMSTKKKVLVLGSGYVSGPVLEY 497
Query: 482 LHRDENIHITLGS 494
L R NI ITLGS
Sbjct: 498 LSRGNNIEITLGS 510
|
|
| UNIPROTKB|D4ACE9 D4ACE9 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1055 (376.4 bits), Expect = 1.1e-200, Sum P(2) = 1.1e-200
Identities = 222/493 (45%), Positives = 312/493 (63%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRA-YPVQAYANAGAIIQEDI 62
V+A+RRED + WERRA LAP ++K + + G KV++QPSNRRA + + G ++ D+
Sbjct: 25 VMALRREDVNAWERRAPLAPKHIKGITKLGYKVLIQPSNRRAIHDKPRLSRGGGEMKSDV 84
Query: 63 SEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDE 122
+ +I G+ + ++LL + + FSH KA + L ++ + RL YE+ D
Sbjct: 85 TSKDLILGMIKPMEEILLSSFSVAYFSHMFKAGHPCLCFLVKVIIQEKRLTSYERR-DFL 143
Query: 123 GNRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNSMMARQAIRDAGY 182
+R+++F V+GM+NI TPFMH+G AHNYRNS A QA+RDAGY
Sbjct: 144 LSRLMSFYCSGSVSGMINILHGMGLRLLALGHHTPFMHLGMAHNYRNSSQAVQAVRDAGY 203
Query: 183 EISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYAC 242
EISLG MPKSIGPLT VFTG+GNVS+GAQE+F ELP EYV P L++V++ G K+Y
Sbjct: 204 EISLGLMPKSIGPLTFVFTGTGNVSKGAQEVFNELPCEYVEPHELKEVSKTGDLRKVYGT 263
Query: 243 EVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLP 302
+ R ++L R G YD EY + P Y S F + IAPY + +INGIYW +P+LLT
Sbjct: 264 VLSRHHHLVRKTDGVYDPVEYEKYPERYISRFNADIAPYTTCLINGIYWEQNTPRLLTRQ 323
Query: 303 DAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDAD 362
DA++LL P +P +G P LPH + C I+ DPG S+ ++I T F L +
Sbjct: 324 DAQSLLVPVKSSVVPV-EGCPELPHNFVLFCLIT-DPGTSMWTYCRMSSIQTNFLLLQKN 381
Query: 363 SNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSP 422
+ +G G+L+CSIDN+P QLP+EAT++FG++++PY ++L SDAS+P+E NFSP
Sbjct: 382 KRLLLDNVEGSGILMCSIDNLPAQLPIEATEYFGDMLYPYVEEMLLSDASQPLESQNFSP 441
Query: 423 AVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKAD-IQTEESRNVLLLGAGYVSRPLIEY 481
V+ A+I SNG LT K+KYI+ LR+ SR + + + VL+LG+GYVS P++EY
Sbjct: 442 VVRDAVITSNGLLTDKYKYIQKLRE----SRERIQFLSMSTKKKVLVLGSGYVSGPVLEY 497
Query: 482 LHRDENIHITLGS 494
L R NI ITLGS
Sbjct: 498 LSRGNNIEITLGS 510
|
|
| UNIPROTKB|Q6GN76 aass "MGC82978 protein" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 1455 (517.2 bits), Expect = 1.8e-170, Sum P(2) = 1.8e-170
Identities = 290/499 (58%), Positives = 363/499 (72%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS 63
V+AIRRED +VWERRA LAP +VK L G KV+VQPSNRRA + Y AG IIQEDI
Sbjct: 25 VLAIRREDINVWERRAPLAPKHVKELTSLGYKVLVQPSNRRAIHEKEYKKAGGIIQEDIQ 84
Query: 64 EASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEG 123
+AS+I GVK+ P + LLPNKTY FSHTIKAQE NM LLD IL+ IRL+DYEK+VD G
Sbjct: 85 DASLIVGVKRPPEEKLLPNKTYAFFSHTIKAQEANMSLLDEILKLEIRLIDYEKMVDHRG 144
Query: 124 NRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNSMMARQAIRDAGYE 183
RVVAFG++AGVAGM+N+ TPFMHIG AHNYRNS A QA+RDAGYE
Sbjct: 145 VRVVAFGQWAGVAGMINMLHGLGLRFLALGHHTPFMHIGMAHNYRNSSQAVQAVRDAGYE 204
Query: 184 ISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE 243
ISLG MPKSIGPLT VFTG+GNVS+GAQEI ELP E+V P L++V++ G K+YA
Sbjct: 205 ISLGLMPKSIGPLTFVFTGTGNVSKGAQEIINELPCEFVEPHELKEVSKTGDLRKVYATV 264
Query: 244 VRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPD 303
+ R ++L R G YD EY++NP LY S F + IAPY + +INGIYW GSP+LLT D
Sbjct: 265 LSRHHHLVRKTDGVYDPVEYDKNPELYTSRFNTDIAPYTTCLINGIYWDPGSPRLLTRQD 324
Query: 304 AKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADS 363
A+ LL P + T +G P LPH+LL I DISAD GGSIEFM ECTTID PFC+YDAD
Sbjct: 325 AQRLLAPVKSSTVAT-EGCPELPHKLLAIGDISADTGGSIEFMTECTTIDMPFCMYDADQ 383
Query: 364 NKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPA 423
+ S +G G+L+CSIDN+P QLP+EAT++FG+++FPY ++L SD KP+E+ FSP
Sbjct: 384 HIIHDSVEGCGILMCSIDNLPAQLPIEATEYFGDMLFPYIEEMLMSDDMKPMEQQTFSPV 443
Query: 424 VQAAIIASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRN-VLLLGAGYVSRPLIEYL 482
V+ A+IAS+G LTPK+KYI+ LR+ SR A + T+ ++ +L+LG+GYVS P+I YL
Sbjct: 444 VRNAVIASSGCLTPKYKYIQKLRE----SREHAQLMTQGTKKKILVLGSGYVSGPVINYL 499
Query: 483 HRDENIHITLGSLLKEDID 501
RD N+ IT S++K+ +D
Sbjct: 500 TRDPNVEITAVSMVKDQVD 518
|
|
| UNIPROTKB|A8E657 AASS "Alpha-aminoadipic semialdehyde synthase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1430 (508.4 bits), Expect = 4.9e-168, Sum P(2) = 4.9e-168
Identities = 284/532 (53%), Positives = 375/532 (70%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS 63
V+A+RRED + WERRA LAP +VK + G KV++QPSNRRA + Y AG I+QEDIS
Sbjct: 25 VMALRREDVNAWERRAPLAPRHVKGITNLGYKVLIQPSNRRAIHDKEYVKAGGILQEDIS 84
Query: 64 EASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEG 123
EA +I GVK+ P + L+P KTY FSHTIKAQE NM LLD IL++ IRL+DYEK+VD G
Sbjct: 85 EACLILGVKRPPEEKLMPKKTYAFFSHTIKAQEANMGLLDEILKQEIRLIDYEKMVDHRG 144
Query: 124 NRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNSMMARQAIRDAGYE 183
RVVAFG++AGVAG++NI TPFMHIG AHNYRNS A QA+RDAGYE
Sbjct: 145 IRVVAFGQWAGVAGIINILHGMGLRLLALGHHTPFMHIGMAHNYRNSGQAVQAVRDAGYE 204
Query: 184 ISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE 243
ISLG MPKSIGPLT VFTG+GNVS+GAQEIF ELP EYV P L++V+++G K+Y
Sbjct: 205 ISLGLMPKSIGPLTFVFTGTGNVSKGAQEIFNELPCEYVEPHELKEVSQNGDLRKVYGTV 264
Query: 244 VRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPD 303
+ R ++L R G YD EY++ P Y S F + IAPY + +INGIYW +P+LLT D
Sbjct: 265 LSRHHHLVRKTDGVYDPVEYDKYPERYISRFNTDIAPYTTCLINGIYWEQNTPRLLTRQD 324
Query: 304 AKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADS 363
A++LL P P + +G P LPH+L+ ICDISAD GGSIEFM ECTTI+ PFC+YDAD
Sbjct: 325 AQSLLAPGKSP-VAGVEGCPALPHKLVAICDISADTGGSIEFMTECTTIERPFCMYDADQ 383
Query: 364 NKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPA 423
+ S +G G+L+CSIDN+P QLP+E+T++FG++++PY +++ SDA++P+E NFSP
Sbjct: 384 HIIHDSVEGSGILMCSIDNLPAQLPIESTEYFGDMLYPYVEEMILSDATQPLESQNFSPV 443
Query: 424 VQAAIIASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEYLH 483
V+ A+IASNG L+ K+KYI+ LR+ H + + VL+LG+GYVS P++EYL
Sbjct: 444 VRDAVIASNGMLSNKYKYIQKLRENR---EHAQSLSMGTKKKVLVLGSGYVSEPVLEYLL 500
Query: 484 RDENIHITLGSLLKEDIDK--DKF-ISFVQSDASKPIEEHNFSPAVQAAIIA 532
RD++I IT+GS +K I++ K+ I+ V K E+ + A Q +I+
Sbjct: 501 RDDSIEITVGSDMKNQIEQLGKKYNINPVSLHVGKQEEKLSSLVATQDLVIS 552
|
|
| UNIPROTKB|F1PEA3 AASS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1417 (503.9 bits), Expect = 1.7e-167, Sum P(2) = 1.7e-167
Identities = 285/533 (53%), Positives = 373/533 (69%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS 63
V+A+RRED + WERRA LAP ++K + G KV++QPSNRRA + Y AG I+QEDIS
Sbjct: 14 VMALRREDVNAWERRAPLAPRHIKGITNLGYKVLIQPSNRRAIHDKEYVKAGGILQEDIS 73
Query: 64 EASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEG 123
EA +I GVK+ P + L+ KTY FSHTIKAQE NM LLD IL++ IRL+DYEK+VD G
Sbjct: 74 EACLILGVKRPPEEKLMSKKTYAFFSHTIKAQEANMGLLDEILRQEIRLIDYEKMVDHRG 133
Query: 124 NRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNSMMARQAIRDAGYE 183
RVVAFG++AGVAGM+NI TPFMHIG AHNYRNS A QA+RDAGYE
Sbjct: 134 TRVVAFGQWAGVAGMINILHGMGLRLLALGHHTPFMHIGMAHNYRNSSQAVQAVRDAGYE 193
Query: 184 ISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE 243
ISLG MPKSIGPLT VFTG+GNVS+GAQEIF ELP EYV P L++V+++G K+Y
Sbjct: 194 ISLGLMPKSIGPLTFVFTGTGNVSKGAQEIFNELPCEYVEPHELKEVSQNGDLRKVYGTV 253
Query: 244 VRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPD 303
+ R ++L R G YD EY++ P Y S F + IAPY + +INGIYW +P+LLT D
Sbjct: 254 LSRHHHLVRKTDGVYDPVEYDKYPERYISRFNTDIAPYTTCLINGIYWEQNTPRLLTRQD 313
Query: 304 AKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADS 363
++LL P + +G P LPH+L+ ICDISAD GGSIEFM ECTTI+ PFC+YDAD
Sbjct: 314 VQSLLVPGKSS-VAGVEGCPALPHKLVAICDISADTGGSIEFMTECTTIEHPFCMYDADQ 372
Query: 364 NKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPA 423
+ S +G G+L+CSIDN+P QLP+EAT++FG++++PY +++ SDA++P+E NFSP
Sbjct: 373 HIIHDSVEGSGILMCSIDNLPAQLPIEATEYFGDMLYPYVEEMILSDATQPLESQNFSPV 432
Query: 424 VQAAIIASNGELTPKFKYIEDLRQQSVKSRHKAD-IQTEESRNVLLLGAGYVSRPLIEYL 482
V+ A+I SNG L K+KYI+ LR+ SR A + + VL+LG+GYVS P++EYL
Sbjct: 433 VRDAVITSNGVLPDKYKYIQKLRE----SRELAQSLSMGTKKRVLVLGSGYVSEPVLEYL 488
Query: 483 HRDENIHITLGSLLKEDIDK--DKF-ISFVQSDASKPIEEHNFSPAVQAAIIA 532
RD I IT+GS +K+ I++ K+ I+ V D SK E+ + A Q +I+
Sbjct: 489 SRDNRIDITVGSDMKDQIEQLGKKYNINPVSMDISKQEEKLSSLVAKQDLVIS 541
|
|
| UNIPROTKB|F1MY13 AASS "Alpha-aminoadipic semialdehyde synthase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1420 (504.9 bits), Expect = 5.6e-167, Sum P(2) = 5.6e-167
Identities = 282/532 (53%), Positives = 373/532 (70%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS 63
V+A+RRED + WERRA LAP +VK + G KV++QPSNRRA + Y AG I+QEDIS
Sbjct: 25 VMALRREDVNAWERRAPLAPRHVKGITNLGYKVLIQPSNRRAIHDKEYVKAGGILQEDIS 84
Query: 64 EASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEG 123
EA +I GVK+ P + L+P KTY FSHTIKAQE NM LLD IL++ IRL+DYEK+VD G
Sbjct: 85 EACLILGVKRPPEEKLMPKKTYAFFSHTIKAQEANMGLLDEILKQEIRLIDYEKMVDHRG 144
Query: 124 NRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNSMMARQAIRDAGYE 183
RVVAFG++AGVAG++NI TPFMHIG AHNYRNS A QA+RDAGYE
Sbjct: 145 IRVVAFGQWAGVAGIINILHGMGLRLLALGHHTPFMHIGMAHNYRNSSQAVQAVRDAGYE 204
Query: 184 ISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE 243
I G MPKSIGPLT VFTG+GNVS+GAQEIF ELP EYV P L++V+++G K+Y
Sbjct: 205 IFKGLMPKSIGPLTFVFTGTGNVSKGAQEIFNELPCEYVEPHELKEVSQNGDLRKVYGTV 264
Query: 244 VRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPD 303
+ R ++L R G YD EY++ P Y S F + IAPY + +INGIYW +P+LLT D
Sbjct: 265 LSRHHHLVRKTDGVYDPVEYDKYPERYISRFNTDIAPYTTCLINGIYWEQNTPRLLTRQD 324
Query: 304 AKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADS 363
A++LL P P + +G P LPH+L+ ICDISAD GGSIEFM ECTTI+ PFC+YDAD
Sbjct: 325 AQSLLAPGKSP-VAGVEGCPALPHKLVAICDISADTGGSIEFMTECTTIERPFCMYDADQ 383
Query: 364 NKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPA 423
+ S +G G+L+CSIDN+P QLP+E+T++FG++++PY +++ SDA++P+E NFSP
Sbjct: 384 HIIHDSVEGSGILMCSIDNLPAQLPIESTEYFGDMLYPYVEEMILSDATQPLESQNFSPV 443
Query: 424 VQAAIIASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEYLH 483
V+ A+IASNG L+ K+KYI+ LR+ H + + VL+LG+GYVS P++EYL
Sbjct: 444 VRDAVIASNGMLSNKYKYIQKLRENR---EHAQSLSMGTKKKVLVLGSGYVSEPVLEYLL 500
Query: 484 RDENIHITLGSLLKEDIDK--DKF-ISFVQSDASKPIEEHNFSPAVQAAIIA 532
RD++I IT+GS +K I++ K+ I+ V K E+ + A Q +I+
Sbjct: 501 RDDSIEITVGSDMKNQIEQLGKKYNINPVSLHVGKQEEKLSSLVATQDLVIS 552
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9UDR5 | AASS_HUMAN | 1, ., 5, ., 1, ., 9 | 0.5599 | 0.4354 | 0.5647 | yes | N/A |
| A2VCW9 | AASS_RAT | 1, ., 5, ., 1, ., 9 | 0.5316 | 0.4471 | 0.5799 | yes | N/A |
| A8E657 | AASS_BOVIN | 1, ., 5, ., 1, ., 9 | 0.5791 | 0.4121 | 0.5345 | yes | N/A |
| Q99K67 | AASS_MOUSE | 1, ., 5, ., 1, ., 9 | 0.5792 | 0.4046 | 0.5248 | yes | N/A |
| Q9SMZ4 | AASS_ARATH | 1, ., 5, ., 1, ., 9 | 0.3528 | 0.6877 | 0.7763 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1201 | |||
| cd12189 | 433 | cd12189, LKR_SDH_like, bifunctional lysine ketoglu | 0.0 | |
| PLN02819 | 1042 | PLN02819, PLN02819, lysine-ketoglutarate reductase | 0.0 | |
| cd05199 | 319 | cd05199, SDH_like, Saccharopine Dehydrogenase like | 1e-91 | |
| pfam03435 | 380 | pfam03435, Saccharop_dh, Saccharopine dehydrogenas | 2e-71 | |
| cd12189 | 433 | cd12189, LKR_SDH_like, bifunctional lysine ketoglu | 1e-66 | |
| COG1748 | 389 | COG1748, LYS9, Saccharopine dehydrogenase and rela | 1e-46 | |
| PLN02819 | 1042 | PLN02819, PLN02819, lysine-ketoglutarate reductase | 9e-37 | |
| cd12188 | 351 | cd12188, SDH, Saccharopine Dehydrogenase NAD-bindi | 2e-32 | |
| pfam05222 | 135 | pfam05222, AlaDh_PNT_N, Alanine dehydrogenase/PNT, | 3e-29 | |
| smart01003 | 133 | smart01003, AlaDh_PNT_N, Alanine dehydrogenase/PNT | 4e-26 | |
| pfam01262 | 150 | pfam01262, AlaDh_PNT_C, Alanine dehydrogenase/PNT, | 3e-23 | |
| cd05199 | 319 | cd05199, SDH_like, Saccharopine Dehydrogenase like | 1e-21 | |
| cd01620 | 317 | cd01620, Ala_dh_like, Alanine dehydrogenase and re | 2e-19 | |
| smart01002 | 149 | smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT | 2e-18 | |
| PLN02819 | 1042 | PLN02819, PLN02819, lysine-ketoglutarate reductase | 7e-13 | |
| cd12189 | 433 | cd12189, LKR_SDH_like, bifunctional lysine ketoglu | 4e-10 | |
| pfam03435 | 380 | pfam03435, Saccharop_dh, Saccharopine dehydrogenas | 1e-08 | |
| cd05304 | 363 | cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD | 2e-06 | |
| cd12181 | 295 | cd12181, ceo_syn, N(5)-(carboxyethyl)ornithine syn | 2e-06 | |
| cd05305 | 359 | cd05305, L-AlaDH, Alanine dehydrogenase NAD-bindin | 2e-05 | |
| pfam01262 | 150 | pfam01262, AlaDh_PNT_C, Alanine dehydrogenase/PNT, | 4e-05 | |
| COG1748 | 389 | COG1748, LYS9, Saccharopine dehydrogenase and rela | 4e-04 | |
| COG0686 | 371 | COG0686, Ald, Alanine dehydrogenase [Amino acid tr | 9e-04 | |
| cd12188 | 351 | cd12188, SDH, Saccharopine Dehydrogenase NAD-bindi | 0.001 | |
| smart01002 | 149 | smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT | 0.001 | |
| COG3288 | 356 | COG3288, PntA, NAD/NADP transhydrogenase alpha sub | 0.002 |
| >gnl|CDD|240665 cd12189, LKR_SDH_like, bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase enzyme | Back alignment and domain information |
|---|
Score = 747 bits (1931), Expect = 0.0
Identities = 266/445 (59%), Positives = 335/445 (75%), Gaps = 14/445 (3%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRS-GVKVIVQPSNRRAYPVQAYANAGAIIQEDI 62
VI IRRED+++WERRA L PS+V+ LV+ GVKV+VQPSNRRA+P Q Y AGAIIQED+
Sbjct: 1 VIGIRREDKNIWERRAPLTPSHVRELVKKPGVKVLVQPSNRRAFPDQEYEAAGAIIQEDL 60
Query: 63 SEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDE 122
S+A +I GVK+ P+D LLP+KTY FSHTIKAQ NMPLLDAIL+KNIRL+DYE +VD+
Sbjct: 61 SDADLILGVKEPPIDKLLPDKTYAFFSHTIKAQPYNMPLLDAILEKNIRLIDYELIVDES 120
Query: 123 GNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGY 182
G R+VAFG +AGVAGM++ILHGLGLRLLALG+ TPF+HIG A+NY + A+QA+RDAGY
Sbjct: 121 GKRLVAFGWFAGVAGMIDILHGLGLRLLALGYSTPFLHIGRAYNYPSLEEAKQAVRDAGY 180
Query: 183 EISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHG-SNTKIYA 241
EI+LG +PKS+GPL VFTGSGNVSQGAQEIF+ELP+EYV P L ++A+ G K+Y
Sbjct: 181 EIALGGLPKSLGPLVFVFTGSGNVSQGAQEIFEELPHEYVEPSDLPELAKSGADRNKVYG 240
Query: 242 CEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTL 301
C V +YLER GG +D +Y NP LY S+F KIAPY S++INGIYW P+LLT
Sbjct: 241 CVVTPEDYLERKDGGPFDRADYYANPELYESVFHEKIAPYLSVLINGIYWDPRFPRLLTN 300
Query: 302 PDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDA 361
+ LLRP P PHRLL I DIS D GGSIEF+ + TTID+PF +YD
Sbjct: 301 EQLQALLRP------------PAGPHRLLAIADISCDIGGSIEFLTKATTIDSPFYVYDP 348
Query: 362 DSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFS 421
D++K S G G+LV S+DN+P +LP EA++ FG+ + PY D+ +SDASKP+EE
Sbjct: 349 DTDKIHDSVSGDGILVMSVDNLPAELPREASEHFGDALLPYVPDLAKSDASKPLEESELP 408
Query: 422 PAVQAAIIASNGELTPKFKYIEDLR 446
P ++ A IASNG+LTPK++YI++LR
Sbjct: 409 PVLRRATIASNGKLTPKYEYIQELR 433
|
Bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase protein is a pair of enzymes linked on a single polypeptide chain that catalyze the initial, consecutive steps of lysine degradation. These proteins are related to the 2-domain saccharopine dehydrogenases. Along with formate dehydrogenase and similar enzymes, SDH consists paired domains resembling Rossmann folds in which the NAD-binding domain is inserted within the linear sequence of the catalytic domain. In this bifunctional enzyme, the LKR domain is N-terminal of the SDH domain. These proteins have a close match to the active site motif of SDHs, and an NAD-binding site motif that is a partial match to that found in SDH and other FDH-related proteins. Length = 433 |
| >gnl|CDD|215439 PLN02819, PLN02819, lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 700 bits (1808), Expect = 0.0
Identities = 353/964 (36%), Positives = 514/964 (53%), Gaps = 82/964 (8%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGV-----KVIVQPSNRRAYPVQAYANAGAII 58
V+ I E + WERRA L PS+ RL+ SG ++IVQPS++R + Y + G I
Sbjct: 7 VVGILAETVNKWERRAPLTPSHCARLLHSGKDRTVSRIIVQPSSKRIHHDAQYEDVGCEI 66
Query: 59 QEDISEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKL 118
ED+S+ +I GVKQ +++LLP++ Y FSHT KAQ NMPLLD IL++ + L DYE +
Sbjct: 67 SEDLSDCGLILGVKQPKLEMLLPDRAYAFFSHTHKAQPENMPLLDKILEERVSLFDYELI 126
Query: 119 VDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIR 178
V D G R+VAFGKYAG AGM++ GLG RLL+LG+ TPF+ +G ++ Y + A+ A+
Sbjct: 127 VGDHGKRLVAFGKYAGRAGMIDFFRGLGQRLLSLGYSTPFLSLGSSYMYSSLAAAKAAVI 186
Query: 179 DAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNT- 237
G EI+ +P I PL VFTGSGNVSQGAQEIF+ LP+ +V P L ++ N
Sbjct: 187 SVGEEIASSGLPLGICPLVFVFTGSGNVSQGAQEIFKLLPHTFVEPSKLPELKGISQNKI 246
Query: 238 ------KIYACEVRRRNYLER-IKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIY 290
++Y C V ++ +E +D +Y +P Y +F KIAPYAS+I+N +Y
Sbjct: 247 STKRVYQVYGCVVTSQDMVEHKDPSKQFDKADYYAHPEHYNPVFHEKIAPYASVIVNCMY 306
Query: 291 WAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECT 350
W P+LLT ++L R P L+G+CDI+ D GGSIEF+N+ T
Sbjct: 307 WEKRFPRLLTTKQLQDLTRKGGCP--------------LVGVCDITCDIGGSIEFLNKTT 352
Query: 351 TIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSD 410
+I+ PF Y+ +N G G+L ++D +PT+ EA+ FGN++ P+ + S
Sbjct: 353 SIEKPFFRYNPSNNSYHDDMDGDGILCMAVDILPTEFAKEASQHFGNILSPF----VGSL 408
Query: 411 ASKPIEEHNFSPAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRNVLLLG 470
AS E ++ A IA G LTP F+YI +R + + + ++ + N+L+
Sbjct: 409 ASMK-ELAELPSHLRRACIAHRGSLTPLFEYIPRMRNSNAELAQD-TVSSQSTFNILVSL 466
Query: 471 AGYV-SRPLIEYLHRDENIHITLGSLLKEDIDKDKFISFVQSDASKPIEEHNFSPAVQAA 529
+G++ + LI +E + + + + K + +++ +E V
Sbjct: 467 SGHLFDKFLI-----NEALDVIEAAGGSFHLAKCQVGQSADAESYSELEVGADDKEVLDQ 521
Query: 530 IIASNGEL-TPKFKYIE---------DLRQQSVKSRH--KADIQTEESRNVLLLGAGYVS 577
II S L P YI + + + T++S+NVL+LGAG V
Sbjct: 522 IIDSLTRLANPNEDYISPAREANKIFLKIGKVQQENECNEKAEVTKKSQNVLILGAGRVC 581
Query: 578 RPLIEYL-------------HRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGS 624
RP EYL ++H+ + SL +D + EA +DV++
Sbjct: 582 RPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSE- 640
Query: 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITV 684
+L V D+V+SLLP + H VA+ CI+ K+LVTASY+S EM AL +A AGIT+
Sbjct: 641 -SLLKYVSQVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEEMSALDSKAKEAGITI 699
Query: 685 LNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGV 744
L E+GLDPGIDH++AM+ ID AH GGKV+SF SYCGGLP+PE + NPL YKFSW+P G
Sbjct: 700 LCEMGLDPGIDHMMAMKMIDDAHERGGKVKSFTSYCGGLPSPEAANNPLAYKFSWNPAGA 759
Query: 745 LLNTLSSAKYLQNSQVVDIPAGGELMRTARP--LDFLPGFSFEGFANRDSLRYAQLYNIA 802
+ + A Y N Q++ + G L +A L LP F+ E NRDSL Y +LY I
Sbjct: 760 IKAGQNPAVYKSNGQIIHVD-GENLFASAVRFRLPNLPAFALECLPNRDSLVYGELYGIE 818
Query: 803 AEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLL------ 856
EA T+ RGTLRY GF M + KLGL D + HP L G + L+ LL
Sbjct: 819 KEAATIFRGTLRYEGFSMIMATLSKLGLFDSENHPLLST-GKRTTYGALLDALLLQDGHN 877
Query: 857 ---GLSTSDIFYENLKNIVADKVGNTGLEALEA---LGLLNDDIIVQKQNTPIDTLSHFL 910
L+ + + L + K T +A + LGL + + + + D + +
Sbjct: 878 ENGPLAGEEEISKRLAKLGHSKNRETAAKAAKTIVFLGLDEETEVPKSCKSIFDVTCYRM 937
Query: 911 RQKL 914
+KL
Sbjct: 938 EEKL 941
|
Length = 1042 |
| >gnl|CDD|240623 cd05199, SDH_like, Saccharopine Dehydrogenase like proteins | Back alignment and domain information |
|---|
Score = 297 bits (762), Expect = 1e-91
Identities = 128/406 (31%), Positives = 179/406 (44%), Gaps = 89/406 (21%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVR--SGVKVIVQPSNRRAYPVQAYANAGAIIQED 61
I I RE ++ +RR L P K L GV++ VQPS R + + Y AG + ED
Sbjct: 1 KIGIIREGKTPPDRRVPLTPEQCKELQAKYPGVEIFVQPSPVRCFKDEEYRAAGIEVVED 60
Query: 62 ISEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD 121
+S+ I+ GVK+VP++ L+PNKTY FSHTIK Q N LL IL+KNI L+DYE LVD+
Sbjct: 61 LSDCDILLGVKEVPIEQLIPNKTYFFFSHTIKKQPYNRKLLQTILEKNITLIDYEVLVDE 120
Query: 122 EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAG 181
+G RV+AFG+YAG+ G N L G + T + AH D
Sbjct: 121 QGKRVIAFGRYAGIVGAYNGLRAYGKK-------TGLFDLKRAH----------ECSDLE 163
Query: 182 YEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYA 241
I+ + P IV TGSG V GA E+ + L + V PE
Sbjct: 164 ELIAELK-KVGLPPPKIVITGSGRVGSGAAEVLKALGIKEVSPE---------------- 206
Query: 242 CEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTL 301
++L A I+ING YW +P+L T
Sbjct: 207 ------DFLT-----------------------------VADILINGHYWDKRAPRLFTK 231
Query: 302 PDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDA 361
D K P+ ++ I D++ D GSI +TI P YD
Sbjct: 232 EDLKK---PD---------------FKIRVIADVTCDIHGSIPSTLRASTIADPVYDYDP 273
Query: 362 DSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDIL 407
+NK+ + V ++DN+P +LP +A++ FG + L L
Sbjct: 274 TTNKEVAFSSPDSITVMAVDNLPCELPRDASEDFGEQLIKSVLPEL 319
|
Saccharopine Dehydrogenase (SDH) and related proteins, including bifunctional lysine ketoglutarate reductase/SDH enzymes and N(5)-(carboxyethyl)ornithine synthases. SDH catalyzes the final step in the reversible NAD-dependent oxidative deamination of saccharopine to alpha-ketoglutarate and lysine, in the alpha-aminoadipate pathway of L-lysine biosynthesis. SDH is structurally related to formate dehydrogenase and similar enzymes, having a 2-domain structure in which a Rossmann-fold NAD(P)-binding domain is inserted within the linear sequence of a catalytic domain of related structure. Bifunctional lysine ketoglutarate reductase/SDH protein is a pair of enzymes linked on a single polypeptide chain that catalyze the initial, consecutive steps of lysine degradation. These proteins are related to the 2-domain saccharopine dehydrogenases. Length = 319 |
| >gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 243 bits (622), Expect = 2e-71
Identities = 87/276 (31%), Positives = 134/276 (48%), Gaps = 7/276 (2%)
Query: 568 VLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSD 625
VL++GAG V + + L R ++ IT+ E + R A +D +N +
Sbjct: 1 VLIIGAGGVGQGVAPLLARHGDLEITVADRSLEKAQALAAPKLGLRFIAIAVDADN--YE 58
Query: 626 NLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVL 685
L L++ DLV++L P L V + CI+ G + V SYL +ALHE+A AG+T +
Sbjct: 59 ALVALLKEGDLVINLAPPFLSLTVLKACIETGVHYVDTSYLREAQLALHEKAKDAGVTAV 118
Query: 686 NEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVL 745
G DPG+ L A +D KV S +CGG P P +NPL + +WSP G+L
Sbjct: 119 LGCGFDPGLVSLFAKYALDDLADELAKVLSVKIHCGGRPEP--KDNPLEFANTWSPEGLL 176
Query: 746 LNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIAAEA 805
+ A+Y +N + V++ G P PG+++E + NR + EA
Sbjct: 177 EELTNPARYWENGKWVEVGWGSHERTIPFPYGIGPGYAYEIYLNRPGTLTRVRSWL-PEA 235
Query: 806 HTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHP 841
V+ GT+R G++ ++ + LGLL H A P
Sbjct: 236 DGVLFGTIRIPGYLTVIKLLGDLGLLRPTVHYAYIP 271
|
This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380 |
| >gnl|CDD|240665 cd12189, LKR_SDH_like, bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase enzyme | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 1e-66
Identities = 86/130 (66%), Positives = 106/130 (81%), Gaps = 4/130 (3%)
Query: 897 QKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLL 956
Q N P+ L L + NIRL+DYE +VD+ G R+VAFG +AGVAGM++ILHGLGLRLL
Sbjct: 93 QPYNMPL--LDAILEK--NIRLIDYELIVDESGKRLVAFGWFAGVAGMIDILHGLGLRLL 148
Query: 957 ALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGA 1016
ALG+ TPF+HIG A+NY + A+QA+RDAGYEI+LG +PKS+GPL VFTGSGNVSQGA
Sbjct: 149 ALGYSTPFLHIGRAYNYPSLEEAKQAVRDAGYEIALGGLPKSLGPLVFVFTGSGNVSQGA 208
Query: 1017 QEIFQELPYE 1026
QEIF+ELP+E
Sbjct: 209 QEIFEELPHE 218
|
Bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase protein is a pair of enzymes linked on a single polypeptide chain that catalyze the initial, consecutive steps of lysine degradation. These proteins are related to the 2-domain saccharopine dehydrogenases. Along with formate dehydrogenase and similar enzymes, SDH consists paired domains resembling Rossmann folds in which the NAD-binding domain is inserted within the linear sequence of the catalytic domain. In this bifunctional enzyme, the LKR domain is N-terminal of the SDH domain. These proteins have a close match to the active site motif of SDHs, and an NAD-binding site motif that is a partial match to that found in SDH and other FDH-related proteins. Length = 433 |
| >gnl|CDD|224662 COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 1e-46
Identities = 82/293 (27%), Positives = 129/293 (44%), Gaps = 16/293 (5%)
Query: 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGS 624
+L++GAG V + L ++ + +T+ KE ++ G+VEA +D +
Sbjct: 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV-- 59
Query: 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITV 684
D L L++ DLV++ P + + + CI+ G + V SY L E A AGIT
Sbjct: 60 DALVALIKDFDLVINAAPPFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITA 119
Query: 685 LNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGV 744
+ G DPGI ++LA A L ++ES Y GGL +NPL Y +WSP
Sbjct: 120 VLGCGFDPGITNVLAAY--AAKEL-FDEIESIDIYVGGLGEHG--DNPLGYATTWSPEIN 174
Query: 745 LLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIAAE 804
L A+Y +N + V++ E P + G+ D LR + I
Sbjct: 175 LREYTRPARYWENGKWVEVDPLEEREVFEFP---VIGYGDVYAFYHDELRS-LVKTIPGV 230
Query: 805 AHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLG 857
T T RY G ++ ++A++ LGLL + EI E + +L
Sbjct: 231 VRTRFEMTFRYPGHLEVIKALRDLGLLSREPVKV----QQEIVPLEFLKAVLP 279
|
Length = 389 |
| >gnl|CDD|215439 PLN02819, PLN02819, lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 9e-37
Identities = 64/130 (49%), Positives = 85/130 (65%), Gaps = 4/130 (3%)
Query: 897 QKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLL 956
Q +N P+ L L + + L DYE +V D G R+VAFGKYAG AGM++ GLG RLL
Sbjct: 103 QPENMPL--LDKILEE--RVSLFDYELIVGDHGKRLVAFGKYAGRAGMIDFFRGLGQRLL 158
Query: 957 ALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGA 1016
+LG+ TPF+ +G ++ Y + A+ A+ G EI+ +P I PL VFTGSGNVSQGA
Sbjct: 159 SLGYSTPFLSLGSSYMYSSLAAAKAAVISVGEEIASSGLPLGICPLVFVFTGSGNVSQGA 218
Query: 1017 QEIFQELPYE 1026
QEIF+ LP+
Sbjct: 219 QEIFKLLPHT 228
|
Length = 1042 |
| >gnl|CDD|240664 cd12188, SDH, Saccharopine Dehydrogenase NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 2e-32
Identities = 101/409 (24%), Positives = 150/409 (36%), Gaps = 93/409 (22%)
Query: 16 ERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS-----EASIIFG 70
ERR AL P+ K+L+ +G KV V+ S +R +P + Y G + S + +II G
Sbjct: 13 ERRTALTPTTAKKLLDAGFKVTVERSPQRIFPDEEYEAVGCELVPAGSWVNAPKDAIILG 72
Query: 71 VKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFG 130
+K++P D + F+H K Q +L + L+D E LVDD+G RV AFG
Sbjct: 73 LKELPEDTFPLPHRHIYFAHAYKGQAGWKDVLSRFARGGGTLLDLEYLVDDDGRRVAAFG 132
Query: 131 KYAGVAGMVNILHGLGLRLLA--LGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGN 188
+AG AG LGL A P Y N ++ A L
Sbjct: 133 YWAGFAGA-----ALGLLAWAHQQLGPVTL---PPVSPYPNEEALVADVKKA-----LAT 179
Query: 189 MPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRN 248
+ P +V G GA ++ + EV + +
Sbjct: 180 GGRK--PRALVIGALGRCGSGAVDLLEAA-----------------------GIEVTKWD 214
Query: 249 YLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLL 308
E GG + E + I +N IY + P LT L
Sbjct: 215 MAETKAGG--PFPEILD----------------HDIFVNCIYLSKPIPPFLTPEM---LQ 253
Query: 309 RPNHMPWLPTSDGAPPLPHRLLGICDISADPGGS---IEFMNECTTIDTPFCLYDADSNK 365
P RL I D+S DP I + TT D P
Sbjct: 254 APG---------------RRLRVIGDVSCDPTNPYNPIPIYDVATTFDKPTLRVPTG--- 295
Query: 366 DTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKP 414
GP + V +ID++P+ LP E+++ F N + P L++ + D +
Sbjct: 296 ------GPPLDVIAIDHLPSLLPRESSEDFSNDLLPSLLELAERDTAGV 338
|
Saccharopine Dehydrogenase (SDH) catalyzes the final step in the reversible NAD-dependent oxidative deamination of saccharopine to alpha-ketoglutarate and lysine, in the alpha-aminoadipate pathway of L-lysine biosynthesis. SHD is structurally related to formate dehydrogenase and similar enzymes, having a 2-domain structure in which a Rossmann-fold NAD(P)-binding domain is inserted within the linear sequence of a catalytic domain of related structure. Length = 351 |
| >gnl|CDD|218508 pfam05222, AlaDh_PNT_N, Alanine dehydrogenase/PNT, N-terminal domain | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 3e-29
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 6 AIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSN--RRAYPVQAYANAGAIIQ---- 59
+ +E ERR AL P+ VK+LV+ G +V+V+ + +AY AGA I
Sbjct: 1 GVPKE-IKPGERRVALTPAGVKKLVKLGHEVLVESGAGLGAGFSDEAYEAAGAEIVDTAA 59
Query: 60 EDISEASIIFGVKQVP---VDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYE 116
E ++A +I VK+ + LL P +T F H N LL+A+ K + + YE
Sbjct: 60 EVWAQADLILKVKEPSPEELALLRPGQTLITFLHPAA----NPELLEALAAKGVTAIAYE 115
Query: 117 KLVDDEGNRVVAFGKYAGVA 136
+ + A A +A
Sbjct: 116 TVPRIRAQSLDALSSMANIA 135
|
This family now also contains the lysine 2-oxoglutarate reductases. Length = 135 |
| >gnl|CDD|214967 smart01003, AlaDh_PNT_N, Alanine dehydrogenase/PNT, N-terminal domain | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 4e-26
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 6 AIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSN--RRAYPVQAYANAGAIIQED-- 61
+ +E + ERR AL P+ VK+LV+ G +V+V+ + +AY AGA I +
Sbjct: 1 GVPKEIKP-GERRVALTPAGVKKLVKLGHEVLVESGAGEGAGFSDEAYEAAGAEIVDTAE 59
Query: 62 -ISEASIIFGVKQV-PVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLV 119
++A II VK+ P +L L + +F + N LL+A+ K + + YE +
Sbjct: 60 VWADADIILKVKEPSPEELALLREGQILFGY--LHPAANPELLEALAAKGVTAIAYETVP 117
Query: 120 -DDEGNRVVAFGKYAG 134
+ A A
Sbjct: 118 RISRAQSLDALSSMAE 133
|
Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Length = 133 |
| >gnl|CDD|216396 pfam01262, AlaDh_PNT_C, Alanine dehydrogenase/PNT, C-terminal domain | Back alignment and domain information |
|---|
Score = 96.5 bits (241), Expect = 3e-23
Identities = 34/204 (16%), Positives = 53/204 (25%), Gaps = 54/204 (26%)
Query: 176 AIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGS 235
+ G L + P +V G G V GA + L ++ + E
Sbjct: 1 LEKYGGGFGMLLGGAGGVPPAKVVVIGGGVVGLGAAATAKGLGAPVTILDVRPERLEQLD 60
Query: 236 NTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGS 295
+ E A IA +I + +
Sbjct: 61 SLFAEFVETD---------------------IFSNCEYLAEAIAEADLVIGTVLIPGARA 99
Query: 296 PKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTP 355
PKL+T K + G+ I D++ D GG IE T D
Sbjct: 100 PKLVTREMVKTMKP-----------GSV--------IVDVAIDQGGCIETTRPTTHSD-- 138
Query: 356 FCLYDADSNKDTKSFKGPGVLVCS 379
++ G GV+
Sbjct: 139 ------------PTYVGDGVVHYG 150
|
This family now also contains the lysine 2-oxoglutarate reductases. Length = 150 |
| >gnl|CDD|240623 cd05199, SDH_like, Saccharopine Dehydrogenase like proteins | Back alignment and domain information |
|---|
Score = 96.9 bits (242), Expect = 1e-21
Identities = 44/132 (33%), Positives = 60/132 (45%), Gaps = 22/132 (16%)
Query: 897 QKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLL 956
Q N + L L + NI L+DYE LVD++G RV+AFG+YAG+ G N L G +
Sbjct: 94 QPYNRKL--LQTILEK--NITLIDYEVLVDEQGKRVIAFGRYAGIVGAYNGLRAYGKK-- 147
Query: 957 ALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGA 1016
T + AH D I+ + P IV TGSG V GA
Sbjct: 148 -----TGLFDLKRAH----------ECSDLEELIAELK-KVGLPPPKIVITGSGRVGSGA 191
Query: 1017 QEIFQELPYEEL 1028
E+ + L +E+
Sbjct: 192 AEVLKALGIKEV 203
|
Saccharopine Dehydrogenase (SDH) and related proteins, including bifunctional lysine ketoglutarate reductase/SDH enzymes and N(5)-(carboxyethyl)ornithine synthases. SDH catalyzes the final step in the reversible NAD-dependent oxidative deamination of saccharopine to alpha-ketoglutarate and lysine, in the alpha-aminoadipate pathway of L-lysine biosynthesis. SDH is structurally related to formate dehydrogenase and similar enzymes, having a 2-domain structure in which a Rossmann-fold NAD(P)-binding domain is inserted within the linear sequence of a catalytic domain of related structure. Bifunctional lysine ketoglutarate reductase/SDH protein is a pair of enzymes linked on a single polypeptide chain that catalyze the initial, consecutive steps of lysine degradation. These proteins are related to the 2-domain saccharopine dehydrogenases. Length = 319 |
| >gnl|CDD|240621 cd01620, Ala_dh_like, Alanine dehydrogenase and related dehydrogenases | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 2e-19
Identities = 89/413 (21%), Positives = 151/413 (36%), Gaps = 107/413 (25%)
Query: 5 IAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQ--PSNRRAYPVQAYANAGAII---- 58
+ +E E R AL PS VK+LV +G KV ++ + + + Y AGA I
Sbjct: 2 LGFPKE-TKNNEFRVALTPSFVKKLVANGFKVYIETGAGSGAGFSDEDYLQAGAQIVPAA 60
Query: 59 QEDISEASIIFGVKQVP---VDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDY 115
++ A II +K+ DL+ + F H TN +++ +++K +
Sbjct: 61 SKEAYSADIIVKLKEPEFAEYDLIKKGQLLVTFLHA----ATNRGVVEVLMRKKLTAYAL 116
Query: 116 EKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQ 175
E L +D R+ AG AG+ LG L AR
Sbjct: 117 EDLENDFRPRLAPNSNIAGYAGVQ-----LGAYEL----------------------ARI 149
Query: 176 AIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGS 235
G + P ++ G+G V GA +I ++L G+
Sbjct: 150 QGGRMGGA-------GGVPPAKVLIIGAGVVGLGAAKIAKKL----------------GA 186
Query: 236 NTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGS 295
N +Y + + +E + G Y + E K I+IN I
Sbjct: 187 NVLVYDIKEEKLKGVETLGGSRLRYSQKEE---------LEKELKQTDILINAILVDGPR 237
Query: 296 -PKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDT 354
P L+ + L+ P + I D++AD GG+ E T+I T
Sbjct: 238 APILIM----EELVGPMK-------------RGAV--IVDLAADQGGNDE-----TSIPT 273
Query: 355 PFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDIL 407
+ +++ GV++ +DNMP+ +P EA++ + PY + +
Sbjct: 274 ---------TEGVPTYEVDGVVIYGVDNMPSLVPREASELLSKNLLPYLVKLA 317
|
Alanine dehydrogenase/Transhydrogenase, such as the hexameric L-alanine dehydrogenase of Phormidium lapideum, contain 2 Rossmann fold-like domains linked by an alpha helical region. Related proteins include Saccharopine Dehydrogenase (SDH), bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase enzyme, N(5)-(carboxyethyl)ornithine synthase, and Rubrum transdehydrogenase. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyrucate to L-alanine via reductive amination. Transhydrogenases found in bacterial and inner mitochondrial membranes link NAD(P)(H)-dependent redox reactions to proton translocation. The energy of the proton electrochemical gradient (delta-p), generated by the respiratory electron transport chain, is consumed by transhydrogenase in NAD(P)+ reduction. Transhydrogenase is likely involved in the regulation of the citric acid cycle. Rubrum transhydrogenase has 3 components, dI, dII, and dIII. dII spans the membrane while dI and dIII protrude on the cytoplasmic/matirx side. DI contains 2 domains with Rossmann folds, linked by a long alpha helix, and contains a NAD binding site. Two dI polypeptides (represented in this sub-family) spontaneously form a heterotrimer with one dIII in the absence of dII. In the heterotrimer, both dI chains may bind NAD, but only one is well-ordered. dIII also binds a well-ordered NADP, but in a different orientation than classical Rossmann domains. Length = 317 |
| >gnl|CDD|214966 smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT, C-terminal domain | Back alignment and domain information |
|---|
Score = 82.9 bits (206), Expect = 2e-18
Identities = 37/186 (19%), Positives = 57/186 (30%), Gaps = 44/186 (23%)
Query: 176 AIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGS 235
+ G L + P +V G+G V GA + L G+
Sbjct: 1 LEKFGGGFGMLLTGAGGVPPAKVVVIGAGVVGLGAAATAKGL----------------GA 44
Query: 236 NTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYW-AVG 294
+ R LE + G + + A ++I +
Sbjct: 45 EVTVLDVRPARLRQLESLLGARFTTLYSQAE-------LLEEAVKEADLVIGAVLIPGAK 97
Query: 295 SPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDT 354
+PKL+T K++ P S I D++AD GG IE TT D
Sbjct: 98 APKLVTREMVKSM--------KPGS-----------VIVDVAADQGGCIETS-RPTTHDD 137
Query: 355 PFCLYD 360
P + D
Sbjct: 138 PTYVVD 143
|
Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Length = 149 |
| >gnl|CDD|215439 PLN02819, PLN02819, lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 7e-13
Identities = 35/106 (33%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
Query: 1056 TGLEALEA---LGLLNDDIIVQKQNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWP 1112
T +A + LGL + + + + D + + +KL ++D+++L H++++ +P
Sbjct: 903 TAAKAAKTIVFLGLDEETEVPKSCKSIFDVTCYRMEEKLAYSGNEQDMVLLHHEVEVEFP 962
Query: 1113 -NRSRERKSISLVVYGQ-PNG--TTAMAKTVGLPAAIAAKMILEGE 1154
++ E+ S +L+ +G+ NG TTAMAKTVG+PAAI A ++LEG+
Sbjct: 963 DSKRIEKHSATLLEFGEIKNGRTTTAMAKTVGIPAAIGALLLLEGK 1008
|
Length = 1042 |
| >gnl|CDD|240665 cd12189, LKR_SDH_like, bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase enzyme | Back alignment and domain information |
|---|
Score = 63.3 bits (155), Expect = 4e-10
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 507 SFVQSDASKPIEEHNFSPAVQAAIIASNGELTPKFKYIEDLR 548
+SDASKP+EE P ++ A IASNG+LTPK++YI++LR
Sbjct: 392 DLAKSDASKPLEESELPPVLRRATIASNGKLTPKYEYIQELR 433
|
Bifunctional lysine ketoglutarate reductase /saccharopine dehydrogenase protein is a pair of enzymes linked on a single polypeptide chain that catalyze the initial, consecutive steps of lysine degradation. These proteins are related to the 2-domain saccharopine dehydrogenases. Along with formate dehydrogenase and similar enzymes, SDH consists paired domains resembling Rossmann folds in which the NAD-binding domain is inserted within the linear sequence of the catalytic domain. In this bifunctional enzyme, the LKR domain is N-terminal of the SDH domain. These proteins have a close match to the active site motif of SDHs, and an NAD-binding site motif that is a partial match to that found in SDH and other FDH-related proteins. Length = 433 |
| >gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 1e-08
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Query: 1058 LEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWPNRSRE 1117
++ L LGLL + P+D L L L ++D + + +++ +
Sbjct: 252 IKLLGDLGLLRPTV-HYAYIPPLDALKSLLESPASLGPEEQDKVRIGVEVEGIDKLGVLL 310
Query: 1118 RKSISLV-VYGQPNGTT--AMAKTVGLPAAIAAKMILEGE 1154
I G AM T G PA +AA ++ GE
Sbjct: 311 TGHIYNAYGSGLSIEEGRSAMPYTTGTPAQVAAALLAGGE 350
|
This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380 |
| >gnl|CDD|240629 cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 51.3 bits (124), Expect = 2e-06
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQP-SNRRA-YPVQAYANAGAII-- 58
I + +E ERR AL P VK+LV+ G +V+V+ + A + +AY AGA I
Sbjct: 1 MTIGVPKETAPG-ERRVALTPETVKKLVKLGFEVLVESGAGEAAGFSDEAYEEAGAEIVS 59
Query: 59 -QEDISEASIIFGVKQVP----VDLLLPNKTY-CMFSHTIKAQETNMPLLDAILQKNI 110
E++++A I+ V + P V LL N L++A+ +K +
Sbjct: 60 DAEELAQADIVLKV-RPPSEEEVALLKEGAVLIGFLDPA-----QNPELVEALAKKGV 111
|
Transhydrogenases found in bacterial and inner mitochondrial membranes link NAD(P)(H)-dependent redox reactions to proton translocation. The energy of the proton electrochemical gradient (delta-p), generated by the respiratory electron transport chain, is consumed by transhydrogenase in NAD(P)+ reduction. Transhydrogenase is likely involved in the regulation of the citric acid cycle. Rubrum transhydrogenase has 3 components, dI, dII, and dIII. dII spans the membrane while dI and dIII protrude on the cytoplasmic/matrix side. DI contains 2 domains in Rossmann-like folds, linked by a long alpha helix, and contains a NAD binding site. Two dI polypeptides (represented in this sub-family) spontaneously form a heterotrimer with dIII in the absence of dII. In the heterotrimer, both dI chains may bind NAD, but only one is well-ordered. dIII also binds a well-ordered NADP, but in a different orientation than a classical Rossmann domain. Length = 363 |
| >gnl|CDD|240658 cd12181, ceo_syn, N(5)-(carboxyethyl)ornithine synthase | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 2e-06
Identities = 76/396 (19%), Positives = 129/396 (32%), Gaps = 131/396 (33%)
Query: 16 ERRAALAPSNVKRL-VRSGVKVIVQPS--NRRAYPVQAYANAGAII---QEDISEASIIF 69
E+R L P++++R+ +R ++ + R + YA GA I +E +++ +I
Sbjct: 13 EKRVPLLPADLERIPLRE--QLYFEEGYGERLGISDEEYAALGAGIVSREEILAKCDVIC 70
Query: 70 GVKQVPVDL--LLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVV 127
K D +L + + H ++ +E +D K + L+ +E + +
Sbjct: 71 DPKPGDADYLEILEGQILWGWVHCVQDKEITQLAID----KKLTLIAWEDMFEWSKIGRH 126
Query: 128 AFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLG 187
F K +AG +LH L L G
Sbjct: 127 VFYKNNELAGYAAVLHALQLY--------------------------------------G 148
Query: 188 NMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRR 247
P + G GN ++GA I A
Sbjct: 149 ITPYR--QTKVAVLGFGNTARGA----------------------------IRA------ 172
Query: 248 NYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPK-LLTLPDAKN 306
+K GG D Y +LF +++ Y II+N I P ++ D K
Sbjct: 173 -----LKLGGADVTVYTRRTE---ALFKEELSEY-DIIVNCILQDTDRPDHIIYEEDLKR 223
Query: 307 LLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKD 366
L +P + I D+S D G IEF + TT D P
Sbjct: 224 L-KPGAL------------------IIDVSCDEGMGIEF-AKPTTFDDP----------- 252
Query: 367 TKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPY 402
+K G+ ++D+ P+ A+ + PY
Sbjct: 253 --IYKVDGIDYYAVDHTPSLFYRSASRSISKALAPY 286
|
N(5)-(carboxyethyl)ornithine synthase (ceo_syn) catalyzes the NADP-dependent conversion of N5-(L-1-carboxyethyl)-L-ornithine to L-ornithine + pyruvate. Ornithine plays a key role in the urea cycle, which in mammals is used in arginine biosynthesis, and is a precursor in polyamine synthesis. ceo_syn is related to the NAD-dependent L-alanine dehydrogenases. Like formate dehydrogenase and related enzymes, ceo_syn is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. These ceo_syn proteins have a partially conserved NAD-binding motif and active site residues that are characteristic of related enzymes such as Saccharopine Dehydrogenase. Length = 295 |
| >gnl|CDD|240630 cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 48.2 bits (116), Expect = 2e-05
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 23/122 (18%)
Query: 16 ERRAALAPSNVKRLVRSGVKVIVQ-----PSNRRAYPVQAYANAGAII---QEDI-SEAS 66
E R AL P+ V LV +G +V+V+ S + + Y+ AGA I E++ ++A
Sbjct: 13 ENRVALTPAGVAELVAAGHEVLVEKGAGLGSG---FSDEEYSEAGAEIVPTAEEVWAKAD 69
Query: 67 IIFGVKQVPV----DLLLPNKT-YCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD 121
+I VK+ P+ DLL + + H + A + L +A+L+K + + YE + D+
Sbjct: 70 LIVKVKE-PLPEEYDLLREGQILFTYL-H-LAADK---ELTEALLEKKVTAIAYETIEDE 123
Query: 122 EG 123
+G
Sbjct: 124 DG 125
|
Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms. Length = 359 |
| >gnl|CDD|216396 pfam01262, AlaDh_PNT_C, Alanine dehydrogenase/PNT, C-terminal domain | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 4e-05
Identities = 10/43 (23%), Positives = 14/43 (32%)
Query: 982 AIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELP 1024
+ G L + P +V G G V GA + L
Sbjct: 1 LEKYGGGFGMLLGGAGGVPPAKVVVIGGGVVGLGAAATAKGLG 43
|
This family now also contains the lysine 2-oxoglutarate reductases. Length = 150 |
| >gnl|CDD|224662 COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 4e-04
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 1060 ALEALGLLNDD-IIVQKQNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWPNRSRER 1118
AL LGLL+ + + VQ++ P++ L L L L +DV V+ ++ R +
Sbjct: 250 ALRDLGLLSREPVKVQQEIVPLEFLKAVLPDPLSLAPDYKDVTVIGVEVKGTKDGRDKTV 309
Query: 1119 KSISLVVYG--QPNGTTAMAKTVGLPAAIAAKMILEGEF 1155
G++A++ T G+PAAI A+++ EGE+
Sbjct: 310 FYNVKDHAEAYSEVGSSAISYTTGVPAAIGAELLAEGEW 348
|
Length = 389 |
| >gnl|CDD|223758 COG0686, Ald, Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 9e-04
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 16 ERRAALAPSNVKRLVRSGVKVIVQPS--NRRAYPVQAYANAGAIIQED----ISEASIIF 69
E R AL P++V+ LV G +V+V+ + Y AGA I +EA ++
Sbjct: 13 ENRVALTPASVRELVNHGHEVLVETGAGAGSGFDDDDYEAAGAKIVATAAEVWAEADMVV 72
Query: 70 GVKQ-VPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGN 124
VK+ +P + + +F++ A L +A+L+ + + YE + +GN
Sbjct: 73 KVKEPLPSEYPYLREGQILFTYLHLAASP--ELTEALLKSGVTAIAYETVQLPDGN 126
|
Length = 371 |
| >gnl|CDD|240664 cd12188, SDH, Saccharopine Dehydrogenase NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 0.001
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 918 LVDYEKLVDDEGNRVVAFGKYAGVAGM 944
L+D E LVDD+G RV AFG +AG AG
Sbjct: 114 LLDLEYLVDDDGRRVAAFGYWAGFAGA 140
|
Saccharopine Dehydrogenase (SDH) catalyzes the final step in the reversible NAD-dependent oxidative deamination of saccharopine to alpha-ketoglutarate and lysine, in the alpha-aminoadipate pathway of L-lysine biosynthesis. SHD is structurally related to formate dehydrogenase and similar enzymes, having a 2-domain structure in which a Rossmann-fold NAD(P)-binding domain is inserted within the linear sequence of a catalytic domain of related structure. Length = 351 |
| >gnl|CDD|214966 smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT, C-terminal domain | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 0.001
Identities = 10/43 (23%), Positives = 15/43 (34%)
Query: 982 AIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELP 1024
+ G L + P +V G+G V GA + L
Sbjct: 1 LEKFGGGFGMLLTGAGGVPPAKVVVIGAGVVGLGAAATAKGLG 43
|
Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Length = 149 |
| >gnl|CDD|225826 COG3288, PntA, NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.002
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 5 IAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQP--SNRRAYPVQAYANAGAII--QE 60
I + +E E R A P VK+LV+ G V+V+ R ++P AY AGA I +
Sbjct: 2 IGVPKE-SLANETRVAATPETVKKLVKLGFDVVVESGAGLRASFPDAAYVAAGATIGAAD 60
Query: 61 DISEASIIFGV 71
+ +A II V
Sbjct: 61 AVWQADIILKV 71
|
Length = 356 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1201 | |||
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 100.0 | |
| KOG0172|consensus | 445 | 100.0 | ||
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 100.0 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 100.0 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 100.0 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 100.0 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 100.0 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 100.0 | |
| COG3288 | 356 | PntA NAD/NADP transhydrogenase alpha subunit [Ener | 100.0 | |
| PF05222 | 136 | AlaDh_PNT_N: Alanine dehydrogenase/PNT, N-terminal | 99.97 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 99.96 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 99.84 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 99.71 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 99.4 | |
| KOG2733|consensus | 423 | 99.37 | ||
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 99.09 | |
| TIGR01921 | 324 | DAP-DH diaminopimelate dehydrogenase. This model r | 99.09 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 99.09 | |
| COG0673 | 342 | MviM Predicted dehydrogenases and related proteins | 99.08 | |
| PF01408 | 120 | GFO_IDH_MocA: Oxidoreductase family, NAD-binding R | 99.01 | |
| KOG0172|consensus | 445 | 98.97 | ||
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 98.95 | |
| PRK11579 | 346 | putative oxidoreductase; Provisional | 98.94 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 98.9 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 98.87 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 98.82 | |
| PRK10206 | 344 | putative oxidoreductase; Provisional | 98.81 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 98.77 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.74 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 98.73 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 98.72 | |
| TIGR01761 | 343 | thiaz-red thiazolinyl imide reductase. This reduct | 98.72 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 98.68 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 98.68 | |
| KOG2741|consensus | 351 | 98.65 | ||
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 98.63 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.63 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 98.62 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 98.62 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 98.53 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 98.51 | |
| PRK06270 | 341 | homoserine dehydrogenase; Provisional | 98.43 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 98.3 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 98.26 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 98.26 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 98.26 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 98.22 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 98.2 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.2 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 98.19 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 98.18 | |
| TIGR03855 | 229 | NAD_NadX aspartate dehydrogenase. Members of this | 98.16 | |
| PRK06349 | 426 | homoserine dehydrogenase; Provisional | 98.14 | |
| PRK13301 | 267 | putative L-aspartate dehydrogenase; Provisional | 98.13 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 98.13 | |
| TIGR03215 | 285 | ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati | 98.11 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 98.09 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 98.09 | |
| PLN02712 | 667 | arogenate dehydrogenase | 98.06 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 98.03 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 98.02 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 98.02 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 98.01 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 98.01 | |
| PRK08300 | 302 | acetaldehyde dehydrogenase; Validated | 97.99 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.98 | |
| KOG0409|consensus | 327 | 97.97 | ||
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 97.97 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.97 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 97.95 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 97.95 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 97.9 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 97.9 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 97.9 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.9 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.87 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.87 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 97.86 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 97.85 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.85 | |
| COG4091 | 438 | Predicted homoserine dehydrogenase [Amino acid tra | 97.84 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 97.82 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 97.82 | |
| PF03447 | 117 | NAD_binding_3: Homoserine dehydrogenase, NAD bindi | 97.81 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 97.79 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 97.78 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 97.74 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.73 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 97.72 | |
| PRK06046 | 326 | alanine dehydrogenase; Validated | 97.72 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 97.72 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 97.71 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 97.71 | |
| PRK08374 | 336 | homoserine dehydrogenase; Provisional | 97.65 | |
| PRK06392 | 326 | homoserine dehydrogenase; Provisional | 97.65 | |
| TIGR02371 | 325 | ala_DH_arch alanine dehydrogenase, Archaeoglobus f | 97.63 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 97.62 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 97.62 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.61 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 97.61 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 97.6 | |
| PRK07680 | 273 | late competence protein ComER; Validated | 97.6 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 97.58 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 97.58 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.57 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.56 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 97.56 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 97.54 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 97.52 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 97.52 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 97.51 | |
| PRK06476 | 258 | pyrroline-5-carboxylate reductase; Reviewed | 97.51 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 97.51 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 97.5 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.5 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.5 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 97.49 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.48 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.48 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.47 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.45 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.44 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.43 | |
| COG0460 | 333 | ThrA Homoserine dehydrogenase [Amino acid transpor | 97.43 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.42 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.41 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.4 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 97.4 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.37 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 97.36 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 97.35 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 97.35 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 97.35 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 97.35 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 97.33 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 97.33 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.33 | |
| PRK06928 | 277 | pyrroline-5-carboxylate reductase; Reviewed | 97.32 | |
| PRK06407 | 301 | ornithine cyclodeaminase; Provisional | 97.32 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 97.32 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 97.32 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 97.3 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.3 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 97.3 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 97.28 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.27 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 97.27 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.26 | |
| PRK07589 | 346 | ornithine cyclodeaminase; Validated | 97.26 | |
| COG3804 | 350 | Uncharacterized conserved protein related to dihyd | 97.26 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 97.23 | |
| PRK06823 | 315 | ornithine cyclodeaminase; Validated | 97.21 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 97.21 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.2 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 97.19 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 97.18 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 97.18 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 97.18 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.15 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 97.15 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 97.14 | |
| PF02423 | 313 | OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst | 97.13 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.13 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.13 | |
| KOG1502|consensus | 327 | 97.12 | ||
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.11 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.11 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.08 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 97.08 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.05 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.04 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 97.03 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 97.03 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 97.02 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.02 | |
| COG5310 | 481 | Homospermidine synthase [Secondary metabolites bio | 97.01 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 97.01 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 97.0 | |
| PLN02256 | 304 | arogenate dehydrogenase | 97.0 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 97.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 96.98 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 96.98 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.97 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 96.97 | |
| COG2423 | 330 | Predicted ornithine cyclodeaminase, mu-crystallin | 96.97 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 96.96 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 96.96 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 96.96 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.96 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.96 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 96.96 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 96.95 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 96.94 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 96.94 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.94 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 96.92 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.92 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 96.91 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 96.91 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.9 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 96.9 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 96.89 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.89 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 96.89 | |
| COG0345 | 266 | ProC Pyrroline-5-carboxylate reductase [Amino acid | 96.88 | |
| PRK06813 | 346 | homoserine dehydrogenase; Validated | 96.88 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 96.88 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.87 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 96.86 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 96.86 | |
| TIGR01546 | 333 | GAPDH-II_archae glyceraldehyde-3-phosphate dehydro | 96.86 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 96.85 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 96.85 | |
| PRK05472 | 213 | redox-sensing transcriptional repressor Rex; Provi | 96.85 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 96.84 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 96.84 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 96.84 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 96.83 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 96.83 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 96.81 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 96.81 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 96.8 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.8 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.78 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 96.77 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 96.76 | |
| PRK08507 | 275 | prephenate dehydrogenase; Validated | 96.76 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 96.76 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 96.76 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 96.75 | |
| PRK05717 | 255 | oxidoreductase; Validated | 96.75 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 96.75 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 96.75 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 96.74 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 96.74 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 96.74 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 96.74 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 96.73 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 96.73 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 96.72 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 96.72 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 96.72 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 96.71 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 96.71 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 96.71 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.71 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.7 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 96.7 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.7 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 96.7 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 96.7 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 96.7 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 96.7 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 96.69 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 96.69 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.68 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 96.68 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.68 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.67 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.67 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 96.67 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 96.66 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 96.65 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 96.64 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.64 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.63 | |
| PRK15182 | 425 | Vi polysaccharide biosynthesis protein TviB; Provi | 96.63 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 96.63 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 96.63 | |
| PRK08643 | 256 | acetoin reductase; Validated | 96.63 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 96.62 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 96.62 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.62 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 96.62 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 96.62 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 96.62 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.61 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 96.61 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.6 | |
| PLN02712 | 667 | arogenate dehydrogenase | 96.59 | |
| PRK06199 | 379 | ornithine cyclodeaminase; Validated | 96.58 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 96.58 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 96.58 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 96.58 | |
| PRK09466 | 810 | metL bifunctional aspartate kinase II/homoserine d | 96.57 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.56 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 96.56 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.55 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 96.55 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 96.54 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 96.53 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.53 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 96.53 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 96.52 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 96.52 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 96.52 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 96.52 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 96.5 | |
| PRK08605 | 332 | D-lactate dehydrogenase; Validated | 96.49 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 96.47 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 96.46 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 96.46 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 96.46 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.46 | |
| PRK09436 | 819 | thrA bifunctional aspartokinase I/homoserine dehyd | 96.45 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 96.45 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 96.44 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 96.44 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.44 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 96.44 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 96.44 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 96.44 | |
| PF04455 | 103 | Saccharop_dh_N: LOR/SDH bifunctional enzyme conser | 96.44 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 96.42 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 96.42 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 96.41 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 96.41 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 96.41 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 96.41 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 96.4 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.38 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 96.38 | |
| PLN02696 | 454 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 96.36 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 96.36 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.36 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.35 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 96.35 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.35 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 96.35 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 96.34 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 96.33 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 96.32 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 96.32 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 96.31 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 96.29 | |
| PRK12439 | 341 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.29 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 96.28 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 96.25 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 96.25 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 96.25 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.25 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 96.25 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.25 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 96.24 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 96.24 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.24 | |
| cd01076 | 227 | NAD_bind_1_Glu_DH NAD(P) binding domain of glutama | 96.23 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 96.22 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.21 | |
| TIGR02130 | 275 | dapB_plant dihydrodipicolinate reductase. This nar | 96.2 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 96.2 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 96.19 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.18 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 96.18 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 96.16 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 96.16 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.16 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 96.16 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 96.15 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 96.14 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.13 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.13 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 96.12 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 96.12 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.12 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 96.12 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 96.11 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 96.1 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 96.1 | |
| PTZ00079 | 454 | NADP-specific glutamate dehydrogenase; Provisional | 96.09 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 96.08 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 96.08 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 96.08 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 96.08 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 96.07 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 96.07 | |
| PRK14620 | 326 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.06 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.06 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.06 | |
| PRK08268 | 507 | 3-hydroxy-acyl-CoA dehydrogenase; Validated | 96.06 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.05 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 96.05 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 96.04 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 96.04 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 96.03 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 96.01 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 96.01 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 96.01 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 96.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 95.99 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.99 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 95.99 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.98 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 95.97 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 95.96 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 95.95 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 95.92 | |
| PRK05678 | 291 | succinyl-CoA synthetase subunit alpha; Validated | 95.92 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.91 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 95.9 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 95.9 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 95.9 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 95.9 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 95.89 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.89 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 95.88 | |
| KOG1209|consensus | 289 | 95.88 | ||
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 95.88 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 95.86 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 95.84 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 95.84 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.83 | |
| PLN02928 | 347 | oxidoreductase family protein | 95.83 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 95.83 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 95.8 | |
| TIGR00243 | 389 | Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras | 95.8 | |
| COG0059 | 338 | IlvC Ketol-acid reductoisomerase [Amino acid trans | 95.8 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 95.79 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 95.78 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 95.76 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 95.76 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 95.76 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 95.76 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 95.75 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 95.75 | |
| TIGR03376 | 342 | glycerol3P_DH glycerol-3-phosphate dehydrogenase ( | 95.75 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.74 | |
| PRK14806 | 735 | bifunctional cyclohexadienyl dehydrogenase/ 3-phos | 95.71 | |
| COG0677 | 436 | WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas | 95.71 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 95.71 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.71 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 95.7 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 95.69 | |
| PRK00676 | 338 | hemA glutamyl-tRNA reductase; Validated | 95.68 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.67 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 95.66 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 95.66 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 95.66 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 95.66 | |
| PRK14030 | 445 | glutamate dehydrogenase; Provisional | 95.65 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 95.64 | |
| TIGR01532 | 325 | E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas | 95.64 | |
| COG1023 | 300 | Gnd Predicted 6-phosphogluconate dehydrogenase [Ca | 95.63 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 95.63 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 95.62 | |
| PLN02477 | 410 | glutamate dehydrogenase | 95.61 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 95.61 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.61 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 95.6 | |
| PRK08605 | 332 | D-lactate dehydrogenase; Validated | 95.6 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 95.6 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 95.59 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.59 | |
| PLN02700 | 377 | homoserine dehydrogenase family protein | 95.58 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 95.57 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 95.57 | |
| PRK09414 | 445 | glutamate dehydrogenase; Provisional | 95.56 | |
| cd05313 | 254 | NAD_bind_2_Glu_DH NAD(P) binding domain of glutama | 95.56 | |
| TIGR00465 | 314 | ilvC ketol-acid reductoisomerase. This is the seco | 95.56 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.55 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.54 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 95.53 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 95.52 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 95.51 | |
| cd01490 | 435 | Ube1_repeat2 Ubiquitin activating enzyme (E1), rep | 95.51 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 95.5 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 95.5 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 95.48 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 95.47 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 95.46 | |
| PTZ00345 | 365 | glycerol-3-phosphate dehydrogenase; Provisional | 95.46 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.45 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 95.45 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 95.45 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.44 | |
| KOG2017|consensus | 427 | 95.44 | ||
| TIGR01019 | 286 | sucCoAalpha succinyl-CoA synthetase, alpha subunit | 95.43 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.43 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 95.42 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.41 | |
| PLN02775 | 286 | Probable dihydrodipicolinate reductase | 95.38 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.37 | |
| COG0476 | 254 | ThiF Dinucleotide-utilizing enzymes involved in mo | 95.36 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 95.36 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 95.34 | |
| TIGR02279 | 503 | PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa | 95.34 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 95.31 | |
| TIGR03450 | 351 | mycothiol_INO1 inositol 1-phosphate synthase, Acti | 95.3 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 95.3 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 95.3 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.29 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 95.28 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 95.27 | |
| cd05297 | 423 | GH4_alpha_glucosidase_galactosidase Glycoside Hydr | 95.26 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 95.26 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 95.26 | |
| TIGR01327 | 525 | PGDH D-3-phosphoglycerate dehydrogenase. This mode | 95.24 | |
| PLN02358 | 338 | glyceraldehyde-3-phosphate dehydrogenase | 95.24 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 95.23 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 95.18 |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-202 Score=1868.12 Aligned_cols=919 Identities=40% Similarity=0.688 Sum_probs=839.2
Q ss_pred CcEEEEEecCCCCCCceeecChHHHHHHHhCCC-----EEEEeCCCCCCCCchHHhhcCcEEccCccCCcEEEEecCCCc
Q psy12817 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGV-----KVIVQPSNRRAYPVQAYANAGAIIQEDISEASIIFGVKQVPV 76 (1201)
Q Consensus 2 ~~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~-----~VlVE~sagr~f~D~eY~~AGA~I~edls~adiIlgVKepp~ 76 (1201)
+.+|||+||++++|||||||||++|++|++.|+ +|+||+|++|+|+|++|++|||+|++++++||+|||||+|++
T Consensus 5 ~~~IgI~kE~~~~~E~RVaLtP~~v~~L~~~G~~~~~~~V~VE~gA~a~f~D~~Y~~AGA~I~~~~~~adiIl~VkeP~~ 84 (1042)
T PLN02819 5 NGVVGILAETVNKWERRAPLTPSHCARLLHSGKDRTVSRIIVQPSSKRIHHDAQYEDVGCEISEDLSDCGLILGVKQPKL 84 (1042)
T ss_pred CcEEEEEecCCCCCCCccCcCHHHHHHHHHCCCCCCCCEEEEcCCCCCCCChHHHHHCCCEEECCCCCCCEEEEECCCCH
Confidence 678999999855699999999999999999998 999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccCCC
Q psy12817 77 DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHT 156 (1201)
Q Consensus 77 ~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~t 156 (1201)
+.++++++|++|+|++|+|++|++++++|+++++|+||||.|+|++|+|+++||+|||++|++++||++|+|+|++++||
T Consensus 85 eell~~~~~i~fs~~~~aq~~n~~ll~~l~~k~it~~ayE~i~~~~G~rl~~fg~~AG~~g~~~~l~~~g~~~L~~~~~~ 164 (1042)
T PLN02819 85 EMLLPDRAYAFFSHTHKAQPENMPLLDKILEERVSLFDYELIVGDHGKRLVAFGKYAGRAGMIDFFRGLGQRLLSLGYST 164 (1042)
T ss_pred HHhcCCCEEEEEecccccccCCHHHHHHHHHcCCeEEEEeceECCCCCEEeechHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhh----
Q psy12817 157 PFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAE---- 232 (1201)
Q Consensus 157 Pfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~---- 232 (1201)
|||+++++|+|+|+++|++||+++|++|++||+|+.++|++|||||+||||+||+++|+.|||++|+|++||++..
T Consensus 165 pf~~l~~~~~y~~~~~~~~a~~~~G~~i~~~g~p~gv~P~~vVi~G~G~Vg~gA~~i~~~lg~~~v~~~~l~~l~~~~~~ 244 (1042)
T PLN02819 165 PFLSLGSSYMYSSLAAAKAAVISVGEEIASSGLPLGICPLVFVFTGSGNVSQGAQEIFKLLPHTFVEPSKLPELKGISQN 244 (1042)
T ss_pred cccccccccccCCHHHHHHHHHhccceeeccCCCCCCCCeEEEEeCCchHHHHHHHHHhhcCCCccCHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999779999999999999999999999999999999999999842
Q ss_pred -cCCcc--EEEecchhHHhhHHHhc-CCcccccccccCcccccchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhccc
Q psy12817 233 -HGSNT--KIYACEVRRRNYLERIK-GGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLL 308 (1201)
Q Consensus 233 -~ga~v--kvy~~~~~~~~~~e~~~-gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lm 308 (1201)
.+... ++|+|.+.+++++++++ |++||+.|||+|||+|+|.|+++++|++||||||+||.+++|+|||++|++++|
T Consensus 245 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~f~~~~y~~~Pe~y~s~F~~~~~~~advlIn~i~~~~~~P~lvt~~~~~~~m 324 (1042)
T PLN02819 245 KISTKRVYQVYGCVVTSQDMVEHKDPSKQFDKADYYAHPEHYNPVFHEKIAPYASVIVNCMYWEKRFPRLLTTKQLQDLT 324 (1042)
T ss_pred CccccccceeeeeecChHHHhhccCCccccchhhhccCchhccchhHHHhHhhCCEEEeeeecCCCCCceeCHHHHHHhh
Confidence 22221 39999999999999998 688999999999999999999999999999999999999999999999888889
Q ss_pred CCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCch
Q psy12817 309 RPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLP 388 (1201)
Q Consensus 309 kpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP 388 (1201)
||| + +||+||||||||+||||||++++|||++|||.|||.+++.++++..+||+||||||||++||
T Consensus 325 k~G---------~-----~~l~vI~DVs~D~gG~ie~~~~~Tt~~~P~~~~~~~~~~~~~~~~~~gv~~~~VdNlP~~lP 390 (1042)
T PLN02819 325 RKG---------G-----CPLVGVCDITCDIGGSIEFLNKTTSIEKPFFRYNPSNNSYHDDMDGDGILCMAVDILPTEFA 390 (1042)
T ss_pred cCC---------C-----ccceEEEEEccCCCCCeeecccCCCCcCCeEeecccccccccccCCCCeEEEEECCccccCH
Confidence 998 3 47999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCCchHHHHHHhhhhcccccc-cccchhhhhh
Q psy12817 389 MEATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKAD-IQTEESRNVL 467 (1201)
Q Consensus 389 ~eAS~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~~yi~~lr~~~~~~~~~~~-~~~~~~~~v~ 467 (1201)
+|||++||++|+||+..|++.+.. ...++.|++|+|+++|+||++|+||++||+.+.+...... .|++.+++|.
T Consensus 391 r~AS~~f~n~llpyv~~la~~g~~-----~~~~~~l~~a~~~~~G~lT~~~~yi~~~~~~~~~~~~~~~~~~~~~~~~v~ 465 (1042)
T PLN02819 391 KEASQHFGNILSPFVGSLASMKEL-----AELPSHLRRACIAHRGSLTPLFEYIPRMRNSNAELAQDTVSSQSTFNILVS 465 (1042)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCch-----hccCHHHhcceeeeCCEecCchHHHHHHHhcccccccccccccccceEEEE
Confidence 999999999999999999977631 2468999999999999999999999999998755443322 2345566666
Q ss_pred hccCCcccccchhhccccccchhhcccccccccccccchhccccCCCCcccccCCChhHHHHHHhccCCcCCccccchhh
Q psy12817 468 LLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKDKFISFVQSDASKPIEEHNFSPAVQAAIIASNGELTPKFKYIEDL 547 (1201)
Q Consensus 468 ~~gsg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (1201)
++| ||||+||||+++|.|+..| | +|++++|+
T Consensus 466 l~g--------------------------------hl~d~~lin~~ld~i~~~g-------------g----~~~~~~~~ 496 (1042)
T PLN02819 466 LSG--------------------------------HLFDKFLINEALDVIEAAG-------------G----SFHLAKCQ 496 (1042)
T ss_pred eee--------------------------------ecccchhhhhhhhhhhccC-------------C----ceeeeeec
Confidence 655 9999999999999999876 4 78888888
Q ss_pred hhhhhccccccccc-------------------------------------------------------ccCCCeEEEEc
Q psy12817 548 RQQSVKSRHKADIQ-------------------------------------------------------TEESRNVLLLG 572 (1201)
Q Consensus 548 ~~q~~~~~s~~~~~-------------------------------------------------------~~~mkKVLILG 572 (1201)
.+|+.++.|++.++ ...|+||+|||
T Consensus 497 ~gqs~~~~S~~~l~v~a~d~~~L~~i~~~l~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rIlVLG 576 (1042)
T PLN02819 497 VGQSADAESYSELEVGADDKEVLDQIIDSLTRLANPNEDYISPAREANKIFLKIGKVQQENECNEKAEVTKKSQNVLILG 576 (1042)
T ss_pred cccCcccccceeeecccCcHHHHHHHHHHHHHhccccccccccchhhhhhhhhhhcccccccccccccccccCCcEEEEC
Confidence 88888777777654 12488999999
Q ss_pred CchhHHHHHHHHHhCCCCe-------------EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 573 AGYVSRPLIEYLHRDENIH-------------ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 573 AG~VG~~va~~La~~~~~~-------------VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
||+||++++++|++.++.+ |+|+|++.++++++++.+++++++.+|+.| .+++.++++++|+||+
T Consensus 577 AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D--~e~L~~~v~~~DaVIs 654 (1042)
T PLN02819 577 AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSD--SESLLKYVSQVDVVIS 654 (1042)
T ss_pred CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCC--HHHHHHhhcCCCEEEE
Confidence 9999999999999877655 999999999999999988888999999998 8899999999999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEee
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~ 719 (1201)
|+|+.+|..++++|+++|+||||++|.++++++|+++|+++|+++++++|||||++||+|++++++.++.+|+|.+|.+|
T Consensus 655 alP~~~H~~VAkaAieaGkHvv~eky~~~e~~~L~e~Ak~AGV~~m~e~GlDPGid~~lA~~~Id~~~~~~GkI~s~~s~ 734 (1042)
T PLN02819 655 LLPASCHAVVAKACIELKKHLVTASYVSEEMSALDSKAKEAGITILCEMGLDPGIDHMMAMKMIDDAHERGGKVKSFTSY 734 (1042)
T ss_pred CCCchhhHHHHHHHHHcCCCEEECcCCHHHHHHHHHHHHHcCCEEEECCccCHHHHHHHHHHHHHhhcccCCcEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999899999999999
Q ss_pred cCCCCCCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCcccccccccccc--CCCceEEEeeCCCccchhh
Q psy12817 720 CGGLPAPECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDF--LPGFSFEGFANRDSLRYAQ 797 (1201)
Q Consensus 720 cGGLPaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf--~pg~~lE~ypNRDSl~Y~~ 797 (1201)
|||||+|++++|||+|||||||+|+|++++|||+|++||++++|++. +||+.+++++| +||++||+||||||++|++
T Consensus 735 ~GGLP~pe~~~npL~YkfsWSp~gvi~~~~npa~~i~~G~~~~V~~~-~l~~~~~~~~~~~~p~~~lE~~pNRdSl~y~~ 813 (1042)
T PLN02819 735 CGGLPSPEAANNPLAYKFSWNPAGAIKAGQNPAVYKSNGQIIHVDGE-NLFASAVRFRLPNLPAFALECLPNRDSLVYGE 813 (1042)
T ss_pred EcCccCcccCCCcccccccCCHHHHHHHhcCcceeeECCEEEEecch-hhhhhccccccccCCCcceEEccCCCcchhHH
Confidence 99999999999999999999999999999999999999999999985 99999999876 7999999999999999999
Q ss_pred hcccccccccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHHHHHHHHcCCCCCch-----hHHHHHHHH
Q psy12817 798 LYNIAAEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTSDI-----FYENLKNIV 872 (1201)
Q Consensus 798 ~YgI~~~~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r~~l~~lL~~~~~~~-----~~~~~~~~~ 872 (1201)
.|||+.+++|++||||||+||+++|++|++|||+++++++++.. +.++||+++++++|+.+.++. .++.+..
T Consensus 814 ~Ygi~~~a~tl~RgTLRy~Gf~~~~~~l~~LGl~~~~~~~~~~~-~~~~tw~~~~~~~l~~~~~~~~~~~~~~~~~~~-- 890 (1042)
T PLN02819 814 LYGIEKEAATIFRGTLRYEGFSMIMATLSKLGLFDSENHPLLST-GKRTTYGALLDALLLQDGHNENGPLAGEEEISK-- 890 (1042)
T ss_pred HhCCCcccceeeEEEEecCCHHHHHHHHHHcCCCCCCccccccC-CCCCCHHHHHHHHhCCCCcccccccccchhHHH--
Confidence 99997789999999999999999999999999999999997754 457899999999999743221 0111111
Q ss_pred HhhhcCcchhHHHhhccccchhhhcccCCCcchhhhHHHhhhhhhhhcccccccccCcceeecccccccccchhhhccch
Q psy12817 873 ADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLG 952 (1201)
Q Consensus 873 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 952 (1201)
T Consensus 891 -------------------------------------------------------------------------------- 890 (1042)
T PLN02819 891 -------------------------------------------------------------------------------- 890 (1042)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhcCCCCCccccCCCcccchhhhHHHHhhhcccccccCCCCCCCCCceeeecCCCccccchhhhhhcCchhHHHHhh
Q psy12817 953 LRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEELVCTL 1032 (1201)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~~~~~~~~~~~~~~ 1032 (1201)
+++..+++
T Consensus 891 -~~~~~~~~----------------------------------------------------------------------- 898 (1042)
T PLN02819 891 -RLAKLGHS----------------------------------------------------------------------- 898 (1042)
T ss_pred -HHHhhhcc-----------------------------------------------------------------------
Confidence 11111111
Q ss_pred ccCCCchhhhhhhhhhhcccchhhHHHHHHHhCCCCCccccCCCCCHHHHHHHHHHhhcCCCCCCccEEEEEeeEEEEeC
Q psy12817 1033 LGLSTSDIFYENLKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWP 1112 (1201)
Q Consensus 1033 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~h~~~~~~~ 1112 (1201)
........++++|+|||||+++.+...++||+|+||++|++||.|+++|||||||||+|+++|+
T Consensus 899 ----------------~~~~~~~~~~~~l~~lgl~~~~~v~~~~~tp~d~l~~~Le~kl~y~~~e~DmVvl~h~~~~e~~ 962 (1042)
T PLN02819 899 ----------------KNRETAAKAAKTIVFLGLDEETEVPKSCKSIFDVTCYRMEEKLAYSGNEQDMVLLHHEVEVEFP 962 (1042)
T ss_pred ----------------cchhhHHHHHHHhhhhcccccccccCCCCCHHHHHHHHHHHHhCCCCCCCeEEEEEEEEEEEEC
Confidence 0011145779999999999988555578999999999999999999999999999999999999
Q ss_pred CCce-EEEEEeEEEEcCCCC---cchhhhccchhHHHHHHHHHcCccceeeccc
Q psy12817 1113 NRSR-ERKSISLVVYGQPNG---TTAMAKTVGLPAAIAAKMILEGEFFVTTSTS 1162 (1201)
Q Consensus 1113 ~~~~-~~~~~~l~~~g~~~~---~~ama~tvg~p~ai~~~~~l~~~~~~~~~~~ 1162 (1201)
+|++ |++++||++||++++ +||||||||+|+||||+|||+|+|+.||+..
T Consensus 963 ~g~~~~~~t~tlv~~Gd~~~g~~~SAMAktVG~P~aiaa~lil~g~I~~~Gv~~ 1016 (1042)
T PLN02819 963 DSKRIEKHSATLLEFGEIKNGRTTTAMAKTVGIPAAIGALLLLEGKIKTRGVLR 1016 (1042)
T ss_pred CCCceEEEEEEEEEecCcCCCCcccHHHHhhcchHHHHHHHHhCCCcCCCeeeC
Confidence 9998 999999999999985 8999999999999999999999999999976
|
|
| >KOG0172|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-87 Score=742.60 Aligned_cols=418 Identities=43% Similarity=0.705 Sum_probs=394.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCch-HHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSD-NLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e-~L~elI~~~DVVIs~lP 642 (1201)
.+++||++|+|+|+++++++|+++.+++|||++|...+++++...+ +++++.+|+.+ ++ .|.+.+++.|+|++++|
T Consensus 1 ~~~~vlllgsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~-~~~av~ldv~~--~~~~L~~~v~~~D~viSLlP 77 (445)
T KOG0172|consen 1 TKKGVLLLGSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGI-NIKAVSLDVAD--EELALRKEVKPLDLVISLLP 77 (445)
T ss_pred CCcceEEecCccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCC-CccceEEEccc--hHHHHHhhhcccceeeeecc
Confidence 3689999999999999999999999999999999999999999887 49999999998 55 89999999999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCC
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGG 722 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGG 722 (1201)
+.+|+.|++.|+..++|+++.||+++++++|++.++.+|+++++++|+|||||||+||++|+++|+.||+++||.|||||
T Consensus 78 ~t~h~lVaK~~i~~~~~~vtsSyv~pe~~~L~~~~v~AG~ti~~e~gldpGidhm~a~~ti~~vh~hgg~i~sf~sycGg 157 (445)
T KOG0172|consen 78 YTFHPLVAKGCIITKEDSVTSSYVDPELEELEKAAVPAGSTIMNEIGLDPGIDHMPAMKTIDLVHEHGGKIKSFKSYCGG 157 (445)
T ss_pred chhhHHHHHHHHHhhcccccccccCHHHHhhhhhccCCCceEecccccCcchhhhhhhccchHHHhhcceeeehhhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCccccccccccccCCCceEEEeeCCCccchhhhcccc
Q psy12817 723 LPAPECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIA 802 (1201)
Q Consensus 723 LPaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf~pg~~lE~ypNRDSl~Y~~~YgI~ 802 (1201)
+|+|+.++||+||||||||.|++++.+++|+|+.||+.++|.+. +++....+++|+||++++|||||||+.|.+.|+|+
T Consensus 158 lpape~s~nplgykfsws~~gvl~a~rnsAky~~~Gkiv~v~g~-~~~~~~~~~~~~pg~al~~yPNrdst~y~evy~I~ 236 (445)
T KOG0172|consen 158 LPAPERSNNPLGYKFSWSPLGVLLALRNSAKYYKNGKIVEVDGG-DLADTATHYDFYPGPALECYPNRDSTEYSEVYGIP 236 (445)
T ss_pred ccChhhCCCCcceeeccchhhhhhhccccchhccCCeEEEeccc-cHHhhccCcccCccccccccCCcchhhHHHHhcch
Confidence 99999999999999999999999999999999999999999886 99999999999999999999999999999999998
Q ss_pred cccccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHHHHHHHHcCCCCCchhHHHHHHHHHhhhcCcchh
Q psy12817 803 AEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTSDIFYENLKNIVADKVGNTGLE 882 (1201)
Q Consensus 803 ~~~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (1201)
.+++|++||||||+||..+|.+|.++||++.+-.+.+...+..++|.++++++++. .++++++.++.++....+.
T Consensus 237 ~ea~tilrgtlryqgf~~~i~aL~~~G~~~~da~~~~~~~an~L~W~~~~~~~~g~-~~~i~ed~i~~i~~~~~~~---- 311 (445)
T KOG0172|consen 237 REAKTILRGTLRYQGFVLIIGALVRCGLLACDALEKFSIPANILTWKELLTSLGGP-FSEIEEDDIKVICIYLSGK---- 311 (445)
T ss_pred HHHHHHHhcccccccHHHHHHHHHHcCccchhhHhhcCCCCCcccHHHHHHhhcCC-CcCccHHHHHHHHHHhhcC----
Confidence 89999999999999999999999999999999988887778899999999999996 4556666666654443321
Q ss_pred HHHhhccccchhhhcccCCCcchhhhHHHhhhhhhhhcccccccccCcceeecccccccccchhhhccchhhhhhcCCCC
Q psy12817 883 ALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHT 962 (1201)
Q Consensus 883 ~l~~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (1201)
T Consensus 312 -------------------------------------------------------------------------------- 311 (445)
T KOG0172|consen 312 -------------------------------------------------------------------------------- 311 (445)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCCcccchhhhHHHHhhhcccccccCCCCCCCCCceeeecCCCccccchhhhhhcCchhHHHHhhccCCCchhhh
Q psy12817 963 PFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEELVCTLLGLSTSDIFY 1042 (1201)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1201)
T Consensus 312 -------------------------------------------------------------------------------- 311 (445)
T KOG0172|consen 312 -------------------------------------------------------------------------------- 311 (445)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhcccchhhHHHHHHHhCCCCCccccCCCCCHHHHHHHHHHhhcCCCCCCccEEEEEeeEEEEeCCCceEEEEEe
Q psy12817 1043 ENLKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWPNRSRERKSIS 1122 (1201)
Q Consensus 1043 ~~l~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~h~~~~~~~~~~~~~~~~~ 1122 (1201)
..+.+.+++|||+||+. .++.+++++||+|.+|+.+|.|.++|+||++|||+|++++|.|++|+++++
T Consensus 312 -----------~~~~l~~~e~Lg~~~~k-~v~~~~~~~DTl~~~l~~~l~y~~~e~Dmvvl~h~~~~~~p~g~~e~~t~~ 379 (445)
T KOG0172|consen 312 -----------DPRILSTLEWLGLFSDK-LVTVRGVSLDTLCPHLEEPLYYVDTEFDMVVLQHKFGTEPPEGKVESITHT 379 (445)
T ss_pred -----------ccchhhhhHhcCCCccc-cccccCCchhccccccccceeccCCccceeEEEecceeeCCCCceEEeeec
Confidence 12468899999999998 777889999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcchhhhccchhHHHHHHHHHcCccceeeccc
Q psy12817 1123 LVVYGQPNGTTAMAKTVGLPAAIAAKMILEGEFFVTTSTS 1162 (1201)
Q Consensus 1123 l~~~g~~~~~~ama~tvg~p~ai~~~~~l~~~~~~~~~~~ 1162 (1201)
|+.||++||+||||||||+|+|||++|+|+|+|+.+|..-
T Consensus 380 l~~yg~~ng~samaktVg~p~ai~~~~~l~~~I~akgl~~ 419 (445)
T KOG0172|consen 380 LVLYGRENGESAMAKTVGSPTAIAAKMLLDGWIRAKGLLR 419 (445)
T ss_pred HhhcCCccchhHHHHhcCchHhhhhhhcccceeecccccc
Confidence 9999999999999999999999999999999999999753
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-62 Score=576.46 Aligned_cols=346 Identities=20% Similarity=0.298 Sum_probs=286.1
Q ss_pred EEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC--ccCCcEEEEecCCCc---
Q psy12817 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED--ISEASIIFGVKQVPV--- 76 (1201)
Q Consensus 4 ~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed--ls~adiIlgVKepp~--- 76 (1201)
+|||+||+ ++|||||||||++|++|+++||+|+||+|+| ++|+|++|++|||+|+++ +++||+|+|||+|++
T Consensus 1 ~IGvpkE~-~~~E~RVAltP~~v~~L~k~G~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~~~~~~~adiIlkV~~P~~~e~ 79 (511)
T TIGR00561 1 KIGVPRES-LDNECRVAATPKTVQQLLKLGFDVLVETGAGAKASFADRAFESAGAGIVDGTLFWQSDIILKVNAPSDAEI 79 (511)
T ss_pred CEEEecCC-CCCCeeeccCHHHHHHHHhCCCEEEEECCCCcCCCcCHHHHHHcCCEEecccchhcCCEEEEeCCCCHHHH
Confidence 48999996 7899999999999999999999999999996 999999999999999864 567999999999998
Q ss_pred cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccc-cCCCceeeccchhhhHHHHHHHHHHHHHHHhccCC
Q psy12817 77 DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVD-DEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHH 155 (1201)
Q Consensus 77 ~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d-~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~ 155 (1201)
+.|++|+|+++|+|+ + .|+++++++++||+|+|+||.|+| ++.+++++|++||++|||+++++ |+++|.+.+
T Consensus 80 ~~l~~g~tli~~l~p--~--~n~~ll~~l~~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~--Aa~~lgr~~- 152 (511)
T TIGR00561 80 AELPAGKALVSFIWP--A--QNPELMEKLAAKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIE--AAHEFGRFF- 152 (511)
T ss_pred HhcCCCCEEEEEcCc--c--CCHHHHHHHHHcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHH--HHHHhhhhc-
Confidence 789999999999997 4 499999999999999999999998 45788999999999999999998 577776643
Q ss_pred CCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCC
Q psy12817 156 TPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGS 235 (1201)
Q Consensus 156 tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga 235 (1201)
.|+.+.+|+ ++|.+|+|+|+|++|+.|+.+++.||+
T Consensus 153 ------------------------~g~~taag~----vp~akVlViGaG~iGl~Aa~~ak~lGA---------------- 188 (511)
T TIGR00561 153 ------------------------TGQITAAGK----VPPAKVLVIGAGVAGLAAIGAANSLGA---------------- 188 (511)
T ss_pred ------------------------CCceecCCC----CCCCEEEEECCCHHHHHHHHHHHHCCC----------------
Confidence 233334443 668999999999999999999999994
Q ss_pred ccEEEecchhHHhhHHHhcCCccccccccc-------Ccccccchhh-------hhcCCcCcEEEEceecCC-CCCcccC
Q psy12817 236 NTKIYACEVRRRNYLERIKGGGYDYQEYNE-------NPSLYRSLFA-------SKIAPYASIIINGIYWAV-GSPKLLT 300 (1201)
Q Consensus 236 ~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~-------~pe~y~s~f~-------~~i~p~~DvlIn~~~w~~-~~PrLIT 300 (1201)
.+.+++.+..+.++.++ .|..|-..+..+ +...++..|. .+.++.+||+|||+.|++ ++|+|+|
T Consensus 189 ~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit 267 (511)
T TIGR00561 189 IVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLIT 267 (511)
T ss_pred EEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeeh
Confidence 45666666666665555 554442222211 0112223332 345678999999999996 7999999
Q ss_pred HHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEee
Q psy12817 301 LPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSI 380 (1201)
Q Consensus 301 ~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~V 380 (1201)
++|++. |||| ++|||||||+|||||++ ++| |. | ...+||+|||+
T Consensus 268 ~emv~~-MKpG------------------svIVDlA~d~GGn~E~t-~p~----~~--~----------~~~~GV~~~gv 311 (511)
T TIGR00561 268 EEMVDS-MKAG------------------SVIVDLAAEQGGNCEYT-KPG----EV--Y----------TTENQVKVIGY 311 (511)
T ss_pred HHHHhh-CCCC------------------CEEEEeeeCCCCCEEEe-cCc----eE--E----------EecCCEEEEee
Confidence 999999 9999 99999999999999994 544 23 2 22478999999
Q ss_pred CCcCCCchHHHHHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCC
Q psy12817 381 DNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKF 439 (1201)
Q Consensus 381 dNLPs~LP~eAS~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~ 439 (1201)
+|||+++|++||++||+|++|||..|.+++. ..+..|..|+++|++++++||++|++.
T Consensus 312 ~nlPs~~p~~AS~l~s~nl~~~l~~l~~~~~-~~~~~d~~d~vlr~~~v~~~G~it~~~ 369 (511)
T TIGR00561 312 TDLPSRLPTQSSQLYGTNLVNLLKLLCKEKD-GNIKVDFEDVVIRGVTVSREGEITWPP 369 (511)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHhCcc-cccccCcCChHHhcCeEEECCEEeCCC
Confidence 9999999999999999999999999985431 234444568999999999999999976
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-60 Score=550.63 Aligned_cols=344 Identities=23% Similarity=0.344 Sum_probs=293.5
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccCc---cCCcEEEEecCCCc-
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQEDI---SEASIIFGVKQVPV- 76 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~edl---s~adiIlgVKepp~- 76 (1201)
|+|||+||+ +++||||||||++|++|++.|++|+||+|+| ++|+|++|++|||+|+++. ++||+|++||+|..
T Consensus 1 m~igi~~E~-~~~E~Rval~P~~v~~l~~~g~~v~vE~gaG~~~~~~D~~Y~~aGa~i~~~~~~~~~~dii~~Vk~p~~~ 79 (370)
T TIGR00518 1 MRIGVPKEI-KNNEFRVALTPAGVAELTSRGHEVLVEAGAGEGSGFTDAAYKAAGAELVATAKQVWDAELVLKVKEPLPE 79 (370)
T ss_pred CEEEEEccC-CCCCceecCCHHHHHHHHhCCCEEEEECCCCcCCCCChHHHHHCCCEEecCHHHHhcCCEEEEeCCCCHH
Confidence 689999997 6789999999999999999999999999995 9999999999999998653 46999999999977
Q ss_pred --cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccC
Q psy12817 77 --DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGH 154 (1201)
Q Consensus 77 --~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~ 154 (1201)
+.+.+++++++|.|+ ..|++++++++++++|+|+||.|++.+|+ +++|++||++|||.++++ |+.+|.+..
T Consensus 80 ~~~~~~~g~~l~~~~~~----a~~~~~~~~l~~~~~t~i~~e~i~~~~~~-~~~l~~~~~iaG~~av~~--aa~~~~~~~ 152 (370)
T TIGR00518 80 EYGYLRHGQILFTYLHL----AAERALTDALLDSGTTAIAYETVQTADGA-LPLLAPMSEVAGRLAAQV--GAYHLEKTQ 152 (370)
T ss_pred HHhhcCCCcEEEEEecc----CCCHHHHHHHHHcCCeEEEeeeeeccCCC-CccccchhHHHHHHHHHH--HHHHhHhhc
Confidence 478899999999998 46899999999999999999999986554 678999999999999996 566665532
Q ss_pred CCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcC
Q psy12817 155 HTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHG 234 (1201)
Q Consensus 155 ~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~g 234 (1201)
.|++++++++++ ++|.+|+|+|+|++|++|+++|+++|
T Consensus 153 -------------------------~g~~~~~~~~~~-l~~~~VlViGaG~vG~~aa~~a~~lG---------------- 190 (370)
T TIGR00518 153 -------------------------GGRGVLLGGVPG-VEPGDVTIIGGGVVGTNAAKMANGLG---------------- 190 (370)
T ss_pred -------------------------CCcceeecCCCC-CCCceEEEEcCCHHHHHHHHHHHHCC----------------
Confidence 567777777765 88999999999999999999999999
Q ss_pred CccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCC-CCCcccCHHHHhcccCCCCC
Q psy12817 235 SNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAV-GSPKLLTLPDAKNLLRPNHM 313 (1201)
Q Consensus 235 a~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~-~~PrLIT~e~v~~lmkpg~~ 313 (1201)
+.+.+++.+..+.+.+....+..+.. .+.+++. ..+.++.+|+||||+.|+. ++|.|||+++++. |||+
T Consensus 191 a~V~v~d~~~~~~~~l~~~~g~~v~~--~~~~~~~-----l~~~l~~aDvVI~a~~~~g~~~p~lit~~~l~~-mk~g-- 260 (370)
T TIGR00518 191 ATVTILDINIDRLRQLDAEFGGRIHT--RYSNAYE-----IEDAVKRADLLIGAVLIPGAKAPKLVSNSLVAQ-MKPG-- 260 (370)
T ss_pred CeEEEEECCHHHHHHHHHhcCceeEe--ccCCHHH-----HHHHHccCCEEEEccccCCCCCCcCcCHHHHhc-CCCC--
Confidence 45677877766666665544442111 1122221 2356778999999999974 7899999999999 9999
Q ss_pred CCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCchHHHHH
Q psy12817 314 PWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEATD 393 (1201)
Q Consensus 314 ~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP~eAS~ 393 (1201)
++|+|++||+|||||+ +++||+|+|+ +..+||++||+||||+.+|++||+
T Consensus 261 ----------------~vIvDva~d~GG~~e~-~~~t~~d~p~-------------~~~~Gv~~~~v~nlP~~~p~~aS~ 310 (370)
T TIGR00518 261 ----------------AVIVDVAIDQGGCVET-SRPTTHDQPT-------------YAVHDVVHYCVANMPGAVPKTSTY 310 (370)
T ss_pred ----------------CEEEEEecCCCCCccC-CcCCCCCCCE-------------EEECCeEEEEeCCcccccHHHHHH
Confidence 8999999999999998 6899999999 455799999999999999999999
Q ss_pred HHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCC
Q psy12817 394 FFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKF 439 (1201)
Q Consensus 394 ~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~ 439 (1201)
+||++|+|||..+++++.... +..|++|++++++++|++|++.
T Consensus 311 ~~~~~l~~~l~~~~~~g~~~~---~~~d~~~~~~~~~~~G~~~~~~ 353 (370)
T TIGR00518 311 ALTNATMPYVLELANHGWRAA---CRSNPALAKGLNTHEGALLSEA 353 (370)
T ss_pred HHHHHHHHHHHHHHhcccccc---cccChHHhcCeEEeCCEEcCHH
Confidence 999999999999997664332 3458999999999999999873
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-61 Score=526.37 Aligned_cols=342 Identities=26% Similarity=0.406 Sum_probs=310.1
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC---ccC-CcEEEEecCCCc
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED---ISE-ASIIFGVKQVPV 76 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed---ls~-adiIlgVKepp~ 76 (1201)
|.||++||. +++|+||+|||..|+.|+++||+|+||.++| ++|+|++|+++||+|+.+ .|. +|+|++||||.+
T Consensus 1 M~IGvpkEi-k~~E~RValtP~~V~~l~~~GheVlVe~gAG~gsg~~D~~Y~~aGA~Iv~ta~~vw~~~dmvvKvKEP~~ 79 (371)
T COG0686 1 MRIGVPKEI-KNNENRVALTPASVRELVNHGHEVLVETGAGAGSGFDDDDYEAAGAKIVATAAEVWAEADMVVKVKEPLP 79 (371)
T ss_pred Ccccccccc-cCCcceeccChHhHHHHHhCCcEEEEecCCcCCCCCChHHHHHcCCEEecCHHHhhcccceEEEecCCCh
Confidence 689999995 8999999999999999999999999999996 999999999999999954 554 999999999988
Q ss_pred ---cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhcc
Q psy12817 77 ---DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALG 153 (1201)
Q Consensus 77 ---~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g 153 (1201)
.+|++++++|.|.|. +..+++.+.|+++++|.|+||.+...+|.... +.+|+.+||..++. +|+.+|.+.
T Consensus 80 ~EY~ylregqiLftyLHL----A~~~~lt~~l~~~gvtaIayETV~~~~g~lPl-LaPMSeVAGrla~q--~Ga~~lek~ 152 (371)
T COG0686 80 SEYPYLREGQILFTYLHL----AASPELTEALLKSGVTAIAYETVQLPDGNLPL-LAPMSEVAGRLAAQ--AGAYYLEKT 152 (371)
T ss_pred hhhhhhcCCcEEEEEeee----cCChHHHHHHHHcCcceEEEEEEEcCCCCCcc-cchHHHHhhhHHHH--HHHHHHHhc
Confidence 569999999999998 67799999999999999999999998887666 89999999999998 589888876
Q ss_pred CCCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhc
Q psy12817 154 HHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEH 233 (1201)
Q Consensus 154 ~~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ 233 (1201)
+ .|+++.+||.|| +.|.+|+|+|.|+||..|..+|..||
T Consensus 153 ~-------------------------GG~GvllgGvpG-V~~~kv~iiGGGvvgtnaAkiA~glg--------------- 191 (371)
T COG0686 153 N-------------------------GGKGVLLGGVPG-VLPAKVVVLGGGVVGTNAAKIAIGLG--------------- 191 (371)
T ss_pred c-------------------------CCceeEecCCCC-CCCccEEEECCccccchHHHHHhccC---------------
Confidence 4 799999999999 99999999999999999999999998
Q ss_pred CCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhh-hhcCCcCcEEEEceecCC-CCCcccCHHHHhcccCCC
Q psy12817 234 GSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFA-SKIAPYASIIINGIYWAV-GSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 234 ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~-~~i~p~~DvlIn~~~w~~-~~PrLIT~e~v~~lmkpg 311 (1201)
++|++.+..+.|..++....++.... .|++..+ ++.++.+|+||+++.+++ ++|+|+|+||+++ ||||
T Consensus 192 -A~Vtild~n~~rl~~ldd~f~~rv~~--------~~st~~~iee~v~~aDlvIgaVLIpgakaPkLvt~e~vk~-MkpG 261 (371)
T COG0686 192 -ADVTILDLNIDRLRQLDDLFGGRVHT--------LYSTPSNIEEAVKKADLVIGAVLIPGAKAPKLVTREMVKQ-MKPG 261 (371)
T ss_pred -CeeEEEecCHHHHhhhhHhhCceeEE--------EEcCHHHHHHHhhhccEEEEEEEecCCCCceehhHHHHHh-cCCC
Confidence 78999999999999888766664332 3333333 566888999999999995 9999999999999 9999
Q ss_pred CCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCchHHH
Q psy12817 312 HMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEA 391 (1201)
Q Consensus 312 ~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP~eA 391 (1201)
+||+||+||+|||||++ ++||+|+|+ |+.+||.||||.|||+.+||++
T Consensus 262 ------------------sVivDVAiDqGGc~Et~-~~TTh~~Pt-------------Y~~~gvvhY~VaNmPgaVprTs 309 (371)
T COG0686 262 ------------------SVIVDVAIDQGGCFETS-HPTTHDDPT-------------YEVDGVVHYGVANMPGAVPRTS 309 (371)
T ss_pred ------------------cEEEEEEEcCCCceecc-ccccCCCCc-------------eeecCEEEEecCCCCccccchh
Confidence 99999999999999995 999999998 7778999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCC
Q psy12817 392 TDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPK 438 (1201)
Q Consensus 392 S~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~ 438 (1201)
|+.++|..+||+..+++++..+.+.. |+.|+.++.++||++|++
T Consensus 310 t~AL~nat~py~l~la~~G~~~a~~~---n~~l~~Gln~~~G~vt~~ 353 (371)
T COG0686 310 TQALTNATLPYILQLADKGLLKALKD---NPALAKGLNTYNGKVTNE 353 (371)
T ss_pred HHHhhhcchHHHHHHhcchHHHHhhc---CHHHhccchhhcceeccH
Confidence 99999999999999998885555543 899999999999999975
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-56 Score=524.78 Aligned_cols=347 Identities=20% Similarity=0.300 Sum_probs=287.1
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC--ccCCcEEEEecCCCc--
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED--ISEASIIFGVKQVPV-- 76 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed--ls~adiIlgVKepp~-- 76 (1201)
|+|||+||+ ++|||||||||++|++|+++||+|+||+|+| ++|+|++|++|||+|+++ +++||+|+|||+|++
T Consensus 1 m~IGipkE~-~~~E~RValtP~~v~~L~~~G~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~~~~v~~~diilkV~~P~~~e 79 (509)
T PRK09424 1 MRIGIPRER-LPGETRVAATPKTVEQLLKLGFEVVVESGAGQLASFDDAAYREAGAEIVDGAAVWQSDIILKVNAPSDDE 79 (509)
T ss_pred CeEEEecCC-CCCCeEeccCHHHHHHHHHCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCcccccCCEEEEeCCCCHHH
Confidence 689999996 7999999999999999999999999999996 999999999999999864 678999999999988
Q ss_pred -cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccc-cCCCceeeccchhhhHHHHHHHHHHHHHHHhccC
Q psy12817 77 -DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVD-DEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGH 154 (1201)
Q Consensus 77 -~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d-~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~ 154 (1201)
+.|++|+|+++|+|+ ..|+++++++++||+|+|+||.|+| .+.+++++|++||+||||+++++ +++++.+.+
T Consensus 80 ~~~l~~g~~li~~l~p----~~~~~l~~~l~~~~it~ia~e~vpr~sraq~~d~lssma~IAGy~Av~~--aa~~~~~~~ 153 (509)
T PRK09424 80 IALLREGATLVSFIWP----AQNPELLEKLAARGVTVLAMDAVPRISRAQSLDALSSMANIAGYRAVIE--AAHEFGRFF 153 (509)
T ss_pred HHhcCCCCEEEEEeCc----ccCHHHHHHHHHcCCEEEEeecccccccCCCcccccchhhhhHHHHHHH--HHHHhcccC
Confidence 679999999999999 6699999999999999999999998 56889999999999999999997 566666542
Q ss_pred CCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcC
Q psy12817 155 HTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHG 234 (1201)
Q Consensus 155 ~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~g 234 (1201)
.|..+++| .++|.+|+|+|+|++|++|+.+|+++|
T Consensus 154 -------------------------~g~~taaG----~~pg~kVlViGaG~iGL~Ai~~Ak~lG---------------- 188 (509)
T PRK09424 154 -------------------------TGQITAAG----KVPPAKVLVIGAGVAGLAAIGAAGSLG---------------- 188 (509)
T ss_pred -------------------------CCceeccC----CcCCCEEEEECCcHHHHHHHHHHHHCC----------------
Confidence 22233344 366899999999999999999999999
Q ss_pred CccEEEecchhHHhhHHHhcCCcccccccccC-------cccccchhh-------hhcCCcCcEEEEceecCC-CCCccc
Q psy12817 235 SNTKIYACEVRRRNYLERIKGGGYDYQEYNEN-------PSLYRSLFA-------SKIAPYASIIINGIYWAV-GSPKLL 299 (1201)
Q Consensus 235 a~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~-------pe~y~s~f~-------~~i~p~~DvlIn~~~w~~-~~PrLI 299 (1201)
+.|.++|.+..+.++.++ .|..|...+..+. -.+.+..+. .+.+..+|++|+|+.|++ ++|+++
T Consensus 189 A~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~li 267 (509)
T PRK09424 189 AIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLI 267 (509)
T ss_pred CEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchH
Confidence 456778888778777776 6766543222110 111222221 233467999999999996 799999
Q ss_pred CHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEe
Q psy12817 300 TLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCS 379 (1201)
Q Consensus 300 T~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~ 379 (1201)
|+++++. |||| ++|+|++||.|||||++ .+ .+|+ +..+||+++|
T Consensus 268 t~~~v~~-mkpG------------------gvIVdvg~~~GG~~e~t-~~---~~~v-------------~~~~gVti~G 311 (509)
T PRK09424 268 TAEMVAS-MKPG------------------SVIVDLAAENGGNCELT-VP---GEVV-------------VTDNGVTIIG 311 (509)
T ss_pred HHHHHHh-cCCC------------------CEEEEEccCCCCCcccc-cC---ccce-------------EeECCEEEEE
Confidence 9999999 9999 89999999999999983 32 2444 3337999999
Q ss_pred eCCcCCCchHHHHHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCC
Q psy12817 380 IDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKF 439 (1201)
Q Consensus 380 VdNLPs~LP~eAS~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~ 439 (1201)
++|+|+++|++||++|++++++++..+.... ...+..+..|+++++++++++|+++++.
T Consensus 312 v~n~P~~~p~~As~lla~~~i~l~~lIt~~~-~g~~~~~~~d~vi~~~~~~~~G~i~~~~ 370 (509)
T PRK09424 312 YTDLPSRLPTQSSQLYGTNLVNLLKLLCPEK-DGNIVVDFDDVVIRGVTVVRDGEITWPP 370 (509)
T ss_pred eCCCchhHHHHHHHHHHhCCccHHHHhccCc-cchhhhcccCHHHhcCeEEECCEEecCC
Confidence 9999999999999999999999988664221 1224445569999999999999999974
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-50 Score=463.41 Aligned_cols=356 Identities=36% Similarity=0.591 Sum_probs=305.1
Q ss_pred EEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHH--cCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 568 VLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNE--FGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 568 VLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~--~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|+|||+|.||+.++++|+++... +|+|+||+.++++++++. ..+++++++|+.| .++|.++++++|+||||+|++
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND--PESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT--HHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC--HHHHHHHHhcCCEEEECCccc
Confidence 79999999999999999998877 899999999999999874 3579999999998 888999999999999999888
Q ss_pred ccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCCCC
Q psy12817 645 LHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLP 724 (1201)
Q Consensus 645 ~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGGLP 724 (1201)
++..++++|+++|+||||.+|..+.+.+++++|+++|+++++++|++||++|++++++++++....+++++|.+||||.|
T Consensus 79 ~~~~v~~~~i~~g~~yvD~~~~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~~~~~~v~~~~~~~g~~~ 158 (386)
T PF03435_consen 79 FGEPVARACIEAGVHYVDTSYVTEEMLALDEEAKEAGVTALPGCGFDPGLSNLLARYAADELDAEGDEVESVDIYVGGLP 158 (386)
T ss_dssp GHHHHHHHHHHHT-EEEESS-HHHHHHHCHHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHHHTTHEEEEEEEEEEEEE
T ss_pred hhHHHHHHHHHhCCCeeccchhHHHHHHHHHHHHhhCCEEEeCcccccchHHHHHHHHHHHhhhhcccceEEEEEEcccc
Confidence 99999999999999999999989999999999999999999999999999999999999999877789999999999999
Q ss_pred CCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCccccccccccccCCCceEEEeeCCCccchhhhcccccc
Q psy12817 725 APECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIAAE 804 (1201)
Q Consensus 725 aPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf~pg~~lE~ypNRDSl~Y~~~YgI~~~ 804 (1201)
+|+.++||++|+++||+++++.++.+++++++||+++++++++.......+..+.++..+++|++++++.++..|+++ +
T Consensus 159 ~p~~~~~~~~~~~~ws~~~~l~e~~~~~~~~~~G~~~~v~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 237 (386)
T PF03435_consen 159 APEAPDNPLGYKFTWSPEGVLEEYSPPARVYRDGKWVEVPPFSEEERVDFPYPIGPGGAYEAFHPEDSTLTRSFYGLP-E 237 (386)
T ss_dssp EGCG--TTTSEEBSS-HHHHHHHHCS-EEEEETTEEEEEETTTTCCCETEEE-SSTTECEEEEEECBGTTHHHHTT-T-T
T ss_pred CCCCCCCCcccceeeeehhhHHhhcccceEeeCCEEEEecCccccceeeeeeEecccceeeeecCcCCceeeEeecCC-C
Confidence 999999999999999999999999999999999999999998443211112233456689999999999999999997 6
Q ss_pred cccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHHHHHHHHcCCCCCchhHHHHHHHHHhhhcCcchhHH
Q psy12817 805 AHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTSDIFYENLKNIVADKVGNTGLEAL 884 (1201)
Q Consensus 805 ~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~l 884 (1201)
..++.++|+||+||+++|+.|.++||++++++..
T Consensus 238 ~~~~~~~t~r~~~~~~~~~~l~~lgl~~~~~~~~---------------------------------------------- 271 (386)
T PF03435_consen 238 VRNVIRKTLRYPGFLNVMKLLKDLGLLSEEPVYV---------------------------------------------- 271 (386)
T ss_dssp TSEEEEEEEEETTHHHHHHHHHHTTTTSHCBEGG----------------------------------------------
T ss_pred cccEEEEEeeEhhHHHHHHHHHhhcccCCccccc----------------------------------------------
Confidence 6699999999999999999999999999876331
Q ss_pred HhhccccchhhhcccCCCcchhhhHHHhhhhhhhhcccccccccCcceeecccccccccchhhhccchhhhhhcCCCCCc
Q psy12817 885 EALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPF 964 (1201)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 964 (1201)
T Consensus 272 -------------------------------------------------------------------------------- 271 (386)
T PF03435_consen 272 -------------------------------------------------------------------------------- 271 (386)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCcccchhhhHHHHhhhcccccccCCCCCCCCCceeeecCCCccccchhhhhhcCchhHHHHhhccCCCchhhhhh
Q psy12817 965 MHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEELVCTLLGLSTSDIFYEN 1044 (1201)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1201)
T Consensus 272 -------------------------------------------------------------------------------- 271 (386)
T PF03435_consen 272 -------------------------------------------------------------------------------- 271 (386)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhcccchhhHHHHHHHhCCCCCccccCCCCCHHHHHHHHHHhhcCCCCCCccEEEEEeeEEEEeCCCceEEEEEeEE
Q psy12817 1045 LKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWPNRSRERKSISLV 1124 (1201)
Q Consensus 1045 l~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~h~~~~~~~~~~~~~~~~~l~ 1124 (1201)
. .+|.|.|++.|++++.+.++++|+++|+|++.-.+++|++.+.+++++
T Consensus 272 ---------~----------------------~~p~~~l~~~l~~~~~~~~~~~d~~~~~v~v~G~~~~G~~~~~~~~~~ 320 (386)
T PF03435_consen 272 ---------Y----------------------VSPRDLLAALLEKRLRPGPGERDMVVLRVEVEGWDKDGKPVRRTSYLV 320 (386)
T ss_dssp ---------G----------------------SCHHHHHHHHHHHHSCTTTT-SEEEEEEEEEEEEETTCEEEEEEEEEE
T ss_pred ---------h----------------------hhHHHHHHhhChhhcCCcccccCceeEEEEEEEEeCCCCEEEEEEeec
Confidence 0 457888888999999999999999999999998889999999999998
Q ss_pred -EEcCC--CCcchhhhccchhHHHHHHHHHcCccceeecccc
Q psy12817 1125 -VYGQP--NGTTAMAKTVGLPAAIAAKMILEGEFFVTTSTSS 1163 (1201)
Q Consensus 1125 -~~g~~--~~~~ama~tvg~p~ai~~~~~l~~~~~~~~~~~~ 1163 (1201)
.++++ .+.|+||+|+|+|+||+|+|+++|++..+|+...
T Consensus 321 ~~~~~~~~~~~~~m~~~tg~~~ai~a~ll~~g~~~~~GV~~P 362 (386)
T PF03435_consen 321 YPSGDPIETGGSAMARTTGIPAAIAAQLLADGEITRPGVVPP 362 (386)
T ss_dssp EEEEECCCSSCHHHHHHHHHHHHHHHHHHHTTSSH-SEEE-S
T ss_pred eecccccCCCCCccHHHhhHHHHHHHHHHHCCCcCCCeEECH
Confidence 66665 6789999999999999999999999999998753
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-49 Score=450.50 Aligned_cols=278 Identities=29% Similarity=0.426 Sum_probs=246.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|+||+|||||.||+.++..|+++++.+|+++||+.+++++++... +++++.++|+.| .+++.++|++.|+||||+|+
T Consensus 1 m~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 1 MMKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CCcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHHhcCCEEEEeCCc
Confidence 789999999999999999999998889999999999999987653 578999999998 88999999999999999999
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCCC
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGL 723 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGGL 723 (1201)
+++..++++|+++|+||+|+||..+..+++++.|+++|++++++||||||++|+++.+.++++++ +++++.+|||++
T Consensus 79 ~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~~~~---~i~si~iy~g~~ 155 (389)
T COG1748 79 FVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKELFD---EIESIDIYVGGL 155 (389)
T ss_pred hhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcchHHHHHHHHHHHhhc---cccEEEEEEecC
Confidence 99999999999999999999987666799999999999999999999999999999999999853 789999999999
Q ss_pred CCCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCcccccccccccc-CCCceEEEeeCCCccchhhhcccc
Q psy12817 724 PAPECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDF-LPGFSFEGFANRDSLRYAQLYNIA 802 (1201)
Q Consensus 724 PaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf-~pg~~lE~ypNRDSl~Y~~~YgI~ 802 (1201)
|+ +.+||++|+++|||+++|+++++|+++|+||+|++|++++.. +.++| .+|.....+.++|++.+... .|+
T Consensus 156 g~--~~~~~l~ya~tws~e~~l~e~~~p~~~~~~Gk~~~v~~~~~~----~~~~~~~~G~~~~y~~~~~el~sL~~-~i~ 228 (389)
T COG1748 156 GE--HGDNPLGYATTWSPEINLREYTRPARYWENGKWVEVDPLEER----EVFEFPVIGYGDVYAFYHDELRSLVK-TIP 228 (389)
T ss_pred CC--CCCCCccceeeecHHHhHHHhcCceEEEeCCEEEEecCcccc----cccccCCCCceeEEecCCccHHHHHH-hCc
Confidence 85 559999999999999999999999999999999999998433 22332 35665455556777765333 455
Q ss_pred cccccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHHHHHHHHcCC
Q psy12817 803 AEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGL 858 (1201)
Q Consensus 803 ~~~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r~~l~~lL~~ 858 (1201)
+.+++++++|+||+||.++|++|++|||++++|++. . ++++|+||+.++|+.
T Consensus 229 ~~~~~~~~~t~r~~g~~~~i~~L~~lGll~~~~v~~---~-~~i~p~eflk~vl~~ 280 (389)
T COG1748 229 GVVRTRFEMTFRYPGHLEVIKALRDLGLLSREPVKV---Q-QEIVPLEFLKAVLPD 280 (389)
T ss_pred ccceeeEEeecCcccHHHHHHHHHHcCCCccccccc---c-cccchHHHHHHhccc
Confidence 467999999999999999999999999999999874 3 789999999999874
|
|
| >COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-50 Score=441.07 Aligned_cols=344 Identities=21% Similarity=0.283 Sum_probs=280.8
Q ss_pred EEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEc--cCccCCcEEEEecCCCc---
Q psy12817 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQ--EDISEASIIFGVKQVPV--- 76 (1201)
Q Consensus 4 ~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~--edls~adiIlgVKepp~--- 76 (1201)
+|||+||. ..+|+||++||+.|++|+++||+|.||+++| +.|+|++|+++||+|. +..+++|+|++|.+|..
T Consensus 1 ~igvp~E~-~~~E~Rva~tP~tv~~l~~~G~~v~ve~gaG~~a~~~D~~y~aaGa~i~~~~~~~~adiilKv~~p~a~e~ 79 (356)
T COG3288 1 RIGVPKES-LANETRVAATPETVKKLVKLGFDVVVESGAGLRASFPDAAYVAAGATIGAADAVWQADIILKVRAPSAAEI 79 (356)
T ss_pred Cccccccc-cCCCceeecCHHHHHHHHhCCcEEEEecCCccccCCChHHHHHhccEeehhhhhccCCeeeeecCCchhhh
Confidence 48999996 8999999999999999999999999999997 9999999999999999 33468999999999987
Q ss_pred cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEecccccc-CCCceeeccchhhhHHHHHHHHHHHHHHHhccCC
Q psy12817 77 DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD-EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHH 155 (1201)
Q Consensus 77 ~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~-~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~ 155 (1201)
..++++.++++|..+ ..|.+++.+|..++++.|.+|.+|+. +-+.++++++++|++||++++.+ +.. .+.+
T Consensus 80 ~~~~~ga~lv~~l~p----~~~~~~v~~La~~~La~fag~~Vpr~vraqlhdpLsS~aNaigy~aVi~A--a~a--~~rf 151 (356)
T COG3288 80 ALLKEGATLVSFLNP----YQNDELVFALAIFVLAAFAGEAVPRIVRAQLHDPLSSQANAIGYIAVIGA--ALA--YGRF 151 (356)
T ss_pred hhcccchhhhhhcCc----ccChHHHHHHHHHHHHHHHHhhhccccchhhccHHHhhhhhhhHHHHHHH--HHH--hhhc
Confidence 346789999999998 67999999999999999999999985 34669999999999999999975 332 3334
Q ss_pred CCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCC
Q psy12817 156 TPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGS 235 (1201)
Q Consensus 156 tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga 235 (1201)
+|||.+ .+ ++++|++++++|.|++|++|+.++.+||+. |+..|+|...+.
T Consensus 152 fpm~~T------------------------Aa---gtv~pA~vlv~G~Gvagl~aiata~~lG~i-Vt~rdlrm~~Ke-- 201 (356)
T COG3288 152 FPMQIT------------------------AA---GTVSPAKVLVIGAGVAGLAAIATAVRLGAI-VTARDLRMFKKE-- 201 (356)
T ss_pred ccchhh------------------------hc---ccccchhhhhhhHHHHHHHHHHHHhhcceE-EehhhhhhHHhh--
Confidence 566532 23 378899999999999999999999999976 888888766641
Q ss_pred ccEEEecchhHHhhHHHhcCCcccccccccCcccccch---hhhhcCCcCcEEEEceecCC-CCCcccCHHHHhcccCCC
Q psy12817 236 NTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSL---FASKIAPYASIIINGIYWAV-GSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 236 ~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~---f~~~i~p~~DvlIn~~~w~~-~~PrLIT~e~v~~lmkpg 311 (1201)
+++..+.+....+..| .+++|.+ +-+++|... +..+.++..||||+|+++|+ ++|+|+|++|+++ ||||
T Consensus 202 qv~s~Ga~f~~~~~ee--~~gGYAk----~ms~~~~~~q~~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~s-MkpG 274 (356)
T COG3288 202 QVESLGAKFLAVEDEE--SAGGYAK----EMSEEFIAKQAELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVAS-MKPG 274 (356)
T ss_pred hhhhcccccccccccc--cCCCccc----cCCHHHHHHHHHHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHh-cCCC
Confidence 1111111111112111 3345665 223444422 22568889999999999995 9999999999999 9999
Q ss_pred CCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCchHHH
Q psy12817 312 HMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEA 391 (1201)
Q Consensus 312 ~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP~eA 391 (1201)
|||+|+++.+|||||.+ + .+ -+ ++.+||+++|..|||+.+|.+|
T Consensus 275 ------------------SViVDlAa~~GGNce~t-~---pg-~~-------------v~~~gV~iig~~nlp~r~a~~a 318 (356)
T COG3288 275 ------------------SVIVDLAAETGGNCELT-E---PG-KV-------------VTKNGVKIIGYTNLPGRLAAQA 318 (356)
T ss_pred ------------------cEEEEehhhcCCCcccc-c---CC-eE-------------EEeCCeEEEeecCcchhhhhhH
Confidence 99999999999999994 2 22 12 6779999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCe
Q psy12817 392 TDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGE 434 (1201)
Q Consensus 392 S~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~ 434 (1201)
|++|+.||++||..+.+++. .. ..|++||.+++|++|+
T Consensus 319 S~LYa~Nl~~~l~ll~~~~~-~~----~~D~vv~~~~vt~~g~ 356 (356)
T COG3288 319 SQLYATNLVNLLKLLCKKKD-AI----FDDEVVRAVTVTRDGE 356 (356)
T ss_pred HHHHHHHHHHHHHHHhccCC-Cc----chHHHHhhheeecCCC
Confidence 99999999999999887665 22 3489999999999995
|
|
| >PF05222 AlaDh_PNT_N: Alanine dehydrogenase/PNT, N-terminal domain; InterPro: IPR007886 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=266.52 Aligned_cols=126 Identities=33% Similarity=0.452 Sum_probs=104.8
Q ss_pred EEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC---c-cCCcEEEEecCCCc---
Q psy12817 6 AIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED---I-SEASIIFGVKQVPV--- 76 (1201)
Q Consensus 6 GI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed---l-s~adiIlgVKepp~--- 76 (1201)
||+||. ++|||||||||++|++|++.|++|+||+|+| ++|+|++|++|||+|+++ + ++|||||+||+|++
T Consensus 1 Gi~kE~-~~~E~RVal~P~~v~~L~~~G~~V~VE~gaG~~a~fsD~~Y~~aGA~I~~~~~ev~~~adiIl~v~~p~~~e~ 79 (136)
T PF05222_consen 1 GIPKES-KPGERRVALTPEDVKKLVKLGHEVLVESGAGEGAGFSDEEYEEAGAEIVSRAEEVYSDADIILKVKPPSEEEL 79 (136)
T ss_dssp EE-B---STT---BSS-HHHHHHHHHTTSEEEEETTTTGGGTB-HHHHHHTTEEEESSHHHHHTTSSEEEESS---GGGG
T ss_pred CccCcC-CCCCcEecccHHHHHHHHhCCCEEEEECCCCCcCcccHHHHhhCCcEEecCchhhcccCCEEEEECCCCHHHH
Confidence 899995 9999999999999999999999999999996 999999999999999953 3 57999999999965
Q ss_pred cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEecccccc-CCCceeeccchhhhH
Q psy12817 77 DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD-EGNRVVAFGKYAGVA 136 (1201)
Q Consensus 77 ~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~-~g~Rlvafg~~AgiA 136 (1201)
+.|++|++|++|+|++ .|+++++.++++|+|+||||.|+|. ++|+|++||+||+||
T Consensus 80 ~~l~~g~~li~~~~~~----~~~~~~~~l~~~~it~~a~E~ipr~s~aq~md~lss~a~iA 136 (136)
T PF05222_consen 80 ALLKPGQTLIGFLHPA----QNKELLEALAKKGITAFALELIPRISRAQSMDVLSSQANIA 136 (136)
T ss_dssp GGS-TTCEEEEE--GG----GHHHHHHHHHHCTEEEEEGGGSBSSGGGGGGTHHHHHHHHH
T ss_pred hhcCCCcEEEEeeccc----cCHHHHHHHHHCCCEEEEhhhCcCCcCCcCcccchhhhccC
Confidence 5689999999999994 4899999999999999999999994 899999999999997
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins, represented in this entry, and to a central glycine-rich region which is part of the NAD(H)-binding site.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1X15_A 2BRU_A 1X14_B 1X13_A 2EEZ_F 2VOE_F 2VHV_B 2VHY_A 2VHX_A 2VHW_A .... |
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-31 Score=273.98 Aligned_cols=164 Identities=37% Similarity=0.506 Sum_probs=124.9
Q ss_pred hhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcc
Q psy12817 179 DAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGY 258 (1201)
Q Consensus 179 ~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f 258 (1201)
..|..+.+.|.++.++|++|+|+|+|+||+||+++|++||++++.+++.....+.......+.+.+...++.+++ .|
T Consensus 4 ~~g~~~~~~~~~~~~~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~ 80 (168)
T PF01262_consen 4 YNGGKGMLLGGPGGVPPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERK---DF 80 (168)
T ss_dssp GSSSSSHEECTTTEE-T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB----C
T ss_pred cCCccceeccCCCCCCCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEccccccccc---cc
Confidence 356666666777889999999999999999999999999999888877655443211222233344444444433 39
Q ss_pred cccccccCcccccchhhhhcCCcCcEEE-EceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeecc
Q psy12817 259 DYQEYNENPSLYRSLFASKIAPYASIII-NGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISA 337 (1201)
Q Consensus 259 ~~~ey~~~pe~y~s~f~~~i~p~~DvlI-n~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~ 337 (1201)
++.+|+++|+.|.+.|++.+. .+|+|| |+++|..++|+|||++|+++ |||| +||+||||
T Consensus 81 ~~~~~~~~~~~~~~~f~~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~-m~~g------------------svIvDis~ 140 (168)
T PF01262_consen 81 DKADYYEHPESYESNFAEFIA-PADIVIGNGLYWGKRAPRLVTEEMVKS-MKPG------------------SVIVDISC 140 (168)
T ss_dssp CHHHCHHHCCHHHHHHHHHHH-H-SEEEEHHHBTTSS---SBEHHHHHT-SSTT------------------EEEEETTG
T ss_pred chhhhhHHHHHhHHHHHHHHh-hCcEEeeecccCCCCCCEEEEhHHhhc-cCCC------------------ceEEEEEe
Confidence 999999999999999997655 468777 68888899999999999999 9999 99999999
Q ss_pred CCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEe
Q psy12817 338 DPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCS 379 (1201)
Q Consensus 338 D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~ 379 (1201)
|+|||||| +++||+++|+ |+++||+|||
T Consensus 141 D~gG~iE~-t~~~T~~~p~-------------~~~~GV~~~~ 168 (168)
T PF01262_consen 141 DQGGSIET-TRPTTHADPT-------------YEKNGVTHYG 168 (168)
T ss_dssp GGT-SBTT-EETTBTTCEE-------------EEETTEEEEE
T ss_pred cCCCCcCc-cccCCCCCCe-------------EEeCCEEEEC
Confidence 99999999 5899999999 6668999997
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-19 Score=202.58 Aligned_cols=249 Identities=18% Similarity=0.225 Sum_probs=183.8
Q ss_pred HHHHHHHhCCCEEEEeCCCCCCCCchHHhhcCcEEccC----ccCCcEEEEecCCC------------------c---cC
Q psy12817 24 SNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQED----ISEASIIFGVKQVP------------------V---DL 78 (1201)
Q Consensus 24 ~~V~~L~~~G~~VlVE~sagr~f~D~eY~~AGA~I~ed----ls~adiIlgVKepp------------------~---~~ 78 (1201)
..+++|.++|++|.| .+|+|++|..+||++.++ +.+||+|+.+-+++ . +.
T Consensus 16 ~~~~~l~~~G~~v~~-----~g~~~~~~~~~g~~~~~~~~~~~~~ad~ii~~~p~~~~~~~i~~~~~~~~~~~~~~~l~~ 90 (296)
T PRK08306 16 ELIRKLVELGAKVSL-----VGFDQLDHGFTGATKSSSLEEALSDVDVIILPVPGTNDEGNVDTVFSNEKLVLTEELLEL 90 (296)
T ss_pred HHHHHHHHCCCEEEE-----EeccccccccCCceeeccHHHHhccCCEEEECCccccCCceeeccccccCCcchHHHHHh
Confidence 578999999999999 889999999999999843 45799999995542 2 45
Q ss_pred CCCCc-EEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccCCCC
Q psy12817 79 LLPNK-TYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTP 157 (1201)
Q Consensus 79 L~~~k-t~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~tP 157 (1201)
|++++ .++++.++ .+-+.+.++||+++++... +.++...+.+-..| ++.++ .+.
T Consensus 91 l~~~~~v~~G~~~~--------~~~~~~~~~gi~~~~~~~~-----~~~~~~ns~~~aeg--av~~a--~~~-------- 145 (296)
T PRK08306 91 TPEHCTIFSGIANP--------YLKELAKETNRKLVELFER-----DDVAILNSIPTAEG--AIMMA--IEH-------- 145 (296)
T ss_pred cCCCCEEEEecCCH--------HHHHHHHHCCCeEEEEecc-----chhhhhccHhHHHH--HHHHH--HHh--------
Confidence 77887 44555553 2335567999999876655 34454555555555 22221 110
Q ss_pred ccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCcc
Q psy12817 158 FMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNT 237 (1201)
Q Consensus 158 fl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~v 237 (1201)
.+.++.+.+++|+|.|++|+.++..++++| +.+
T Consensus 146 -------------------------------~~~~l~g~kvlViG~G~iG~~~a~~L~~~G----------------a~V 178 (296)
T PRK08306 146 -------------------------------TPITIHGSNVLVLGFGRTGMTLARTLKALG----------------ANV 178 (296)
T ss_pred -------------------------------CCCCCCCCEEEEECCcHHHHHHHHHHHHCC----------------CEE
Confidence 012456789999999999999999999999 557
Q ss_pred EEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCC
Q psy12817 238 KIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLP 317 (1201)
Q Consensus 238 kvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~ 317 (1201)
.+++.+..+....+. .|..+. .+ +. ..+.++.+|+||||+- +.++++++++. |+|+
T Consensus 179 ~v~~r~~~~~~~~~~-~G~~~~---------~~-~~-l~~~l~~aDiVI~t~p-----~~~i~~~~l~~-~~~g------ 234 (296)
T PRK08306 179 TVGARKSAHLARITE-MGLSPF---------HL-SE-LAEEVGKIDIIFNTIP-----ALVLTKEVLSK-MPPE------ 234 (296)
T ss_pred EEEECCHHHHHHHHH-cCCeee---------cH-HH-HHHHhCCCCEEEECCC-----hhhhhHHHHHc-CCCC------
Confidence 788777655544443 443211 11 11 1345778999999962 36789999988 8999
Q ss_pred CCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCc-hHHHHHHHH
Q psy12817 318 TSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQL-PMEATDFFG 396 (1201)
Q Consensus 318 ~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~L-P~eAS~~fs 396 (1201)
++|+|+++++|| ++|. . .+..||.+++++|||+.+ |.+||++|+
T Consensus 235 ------------~vIIDla~~pgg-td~~---------~-------------a~~~Gv~~~~~~~lpg~vap~ta~~~~~ 279 (296)
T PRK08306 235 ------------ALIIDLASKPGG-TDFE---------Y-------------AEKRGIKALLAPGLPGKVAPKTAGQILA 279 (296)
T ss_pred ------------cEEEEEccCCCC-cCee---------e-------------hhhCCeEEEEECCCCccCCHHHHHHHHH
Confidence 899999999998 6651 1 345799999999999999 999999999
Q ss_pred HHhHHHHHHHHh
Q psy12817 397 NLVFPYALDILQ 408 (1201)
Q Consensus 397 ~~L~pyl~~l~~ 408 (1201)
+++.+||..+..
T Consensus 280 ~~i~~~l~~~~~ 291 (296)
T PRK08306 280 NVLSQLLAEDLI 291 (296)
T ss_pred HHHHHHHHHHHh
Confidence 999999987764
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.8e-18 Score=217.39 Aligned_cols=111 Identities=53% Similarity=0.857 Sum_probs=109.0
Q ss_pred hhhcccccccccCcceeecccccccccchhhhccchhhhhhcCCCCCccccCCCcccchhhhHHHHhhhcccccccCCCC
Q psy12817 917 RLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMP 996 (1201)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1201)
++++||.+.+++|.||++||+|||.+||.|+||++|.|.|..||+||||+|+++|+|+|..++.+|+++.|.+|.++++|
T Consensus 119 t~~ayE~i~~~~G~rl~~fg~~AG~~g~~~~l~~~g~~~L~~~~~~pf~~l~~~~~y~~~~~~~~a~~~~G~~i~~~g~p 198 (1042)
T PLN02819 119 SLFDYELIVGDHGKRLVAFGKYAGRAGMIDFFRGLGQRLLSLGYSTPFLSLGSSYMYSSLAAAKAAVISVGEEIASSGLP 198 (1042)
T ss_pred eEEEEeceECCCCCEEeechHHHHHHHHHHHHHHHHHHHHhccCCCcccccccccccCCHHHHHHHHHhccceeeccCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeeecCCCccccchhhhhhcCchhH
Q psy12817 997 KSIGPLTIVFTGSGNVSQGAQEIFQELPYEE 1027 (1201)
Q Consensus 997 ~~~~~~~~~~~~~g~~~~~~~e~~~~~~~~~ 1027 (1201)
+.++|++++|||.|+|+.+|+|+|+.||++.
T Consensus 199 ~gv~P~~vVi~G~G~Vg~gA~~i~~~lg~~~ 229 (1042)
T PLN02819 199 LGICPLVFVFTGSGNVSQGAQEIFKLLPHTF 229 (1042)
T ss_pred CCCCCeEEEEeCCchHHHHHHHHHhhcCCCc
Confidence 9999999999999999999999999999985
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3e-12 Score=143.36 Aligned_cols=185 Identities=17% Similarity=0.286 Sum_probs=138.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC-C
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL-P 642 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l-P 642 (1201)
...++|.| .|++|..++++|++++ ....+++||..++..+...+ +.++...++.+ ++.+++++.+.+||+||+ |
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g-~~~aLAgRs~~kl~~l~~~L-G~~~~~~p~~~--p~~~~~~~~~~~VVlncvGP 81 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREG-LTAALAGRSSAKLDALRASL-GPEAAVFPLGV--PAALEAMASRTQVVLNCVGP 81 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcC-CchhhccCCHHHHHHHHHhc-CccccccCCCC--HHHHHHHHhcceEEEecccc
Confidence 36799999 6999999999999874 55689999999999999887 45555666665 889999999999999999 7
Q ss_pred Cccc-HHHHHHHHHcCCeEEEcc---CChHHHHHH-HHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcC-CcEEEE
Q psy12817 643 YNLH-HHVAEFCIQHGKNLVTAS---YLSPEMMAL-HERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNG-GKVESF 716 (1201)
Q Consensus 643 ~~~h-~~VakacIeaGkh~VD~S---yvs~e~~eL-de~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~g-gkV~sf 716 (1201)
|..| .+++++|+.+|+||+|++ ++-+.+-.+ |++|+++|+.++++||||.-.+++-.+.+.++....+ +.+...
T Consensus 82 yt~~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsIPsDl~v~~l~~~~~~d~~~~~~~t 161 (382)
T COG3268 82 YTRYGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCGFDSIPSDLGVYALLKQALPDGTEELIAT 161 (382)
T ss_pred ccccccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCCCCcCccchHHHHHHHhhCcccccchhhh
Confidence 7654 789999999999999997 344555554 9999999999999999999888885555555554322 111110
Q ss_pred EeecCCCCCCCCCCCccccc-cccC----hHHHHHHhccceeeeeCCeEEEecCC
Q psy12817 717 VSYCGGLPAPECSENPLRYK-FSWS----PRGVLLNTLSSAKYLQNSQVVDIPAG 766 (1201)
Q Consensus 717 ~s~cGGLPaPe~~~nPL~Yk-fSWS----p~gvL~a~~~~A~~l~dG~~v~Vp~~ 766 (1201)
++-++.- -+|. ....++.+....+..++|+.+.+|..
T Consensus 162 -------------~l~l~s~t~~g~S~GTaat~~e~l~~~~~~~~~gr~~~~P~~ 203 (382)
T COG3268 162 -------------HLALGSFTGSGISGGTAATSVEGLATAGKDPEAGRLLRVPYA 203 (382)
T ss_pred -------------heeeeecccCCcccccHHHHHHHHHhccCCcccCceeccCce
Confidence 1111111 1122 33445556667888999999999874
|
|
| >KOG2733|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.1e-12 Score=145.42 Aligned_cols=131 Identities=20% Similarity=0.384 Sum_probs=109.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHh---CCCCeEEEEeCCHHHHHHHHHHc--------CCeeEEEeecCCCCchHHHhhcc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHR---DENIHITLGSLLKEDIDKVTNEF--------GRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~---~~~~~VtVadR~~ekAe~La~~~--------~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
...++|+| +|+.|..+++++.+ .++.++.||+|+++++++..+.. +....+..|.+| ++++.++.+
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n--~~Sl~emak 82 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSAN--EASLDEMAK 82 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCC--HHHHHHHHh
Confidence 45799999 69999999999987 35678999999999998877654 223367789998 899999999
Q ss_pred CCcEEEEcC-CCccc-HHHHHHHHHcCCeEEEccCChHH----HHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 633 SADLVVSLL-PYNLH-HHVAEFCIQHGKNLVTASYLSPE----MMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 633 ~~DVVIs~l-P~~~h-~~VakacIeaGkh~VD~Syvs~e----~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
++.+|+||+ ||.+| .+|+++|+++|+|++|+|-.+.- ....|+.|++.|+-+++.||||.=.-+|
T Consensus 83 ~~~vivN~vGPyR~hGE~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVsaCGfDSIPaDl 153 (423)
T KOG2733|consen 83 QARVIVNCVGPYRFHGEPVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKEKGVYIVSACGFDSIPADL 153 (423)
T ss_pred hhEEEEeccccceecCcHHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHhcCeEEEeecccCCCCccc
Confidence 999999999 88887 78999999999999999854332 3458999999999999999998754444
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.4e-09 Score=121.51 Aligned_cols=140 Identities=17% Similarity=0.199 Sum_probs=109.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|+||+|||+|.+|+.+++.+.+.+ +++ +.++||+.++++++++.+ +... .+++++++.++|+|+.|+|
T Consensus 1 mmrIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~-~~~~---------~~~~~ell~~~DvVvi~a~ 70 (265)
T PRK13304 1 MLKIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKT-GAKA---------CLSIDELVEDVDLVVECAS 70 (265)
T ss_pred CCEEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhc-CCee---------ECCHHHHhcCCCEEEEcCC
Confidence 579999999999999999998764 566 668999999999888765 3221 1235566678999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccC----ChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASY----LSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Sy----vs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
...|.++++.|+++|+|++++|. ..+..++|.+.|+++|+.++...|...|+|.+.+. .-|++.++..
T Consensus 71 ~~~~~~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~l~v~sga~~g~d~i~a~--------~~G~i~~V~~ 142 (265)
T PRK13304 71 VNAVEEVVPKSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKIYLPSGAIVGLDGIKAA--------SLGEIKSVTL 142 (265)
T ss_pred hHHHHHHHHHHHHcCCCEEEEchHHhcCHHHHHHHHHHHHHcCCEEEEeCchHHhHHHHHHH--------hcCCccEEEE
Confidence 99999999999999999999875 34456789999999999998878877777665332 1256666666
Q ss_pred ecCC
Q psy12817 719 YCGG 722 (1201)
Q Consensus 719 ~cGG 722 (1201)
+..-
T Consensus 143 ~~~k 146 (265)
T PRK13304 143 TTRK 146 (265)
T ss_pred EEec
Confidence 5543
|
|
| >TIGR01921 DAP-DH diaminopimelate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.1e-09 Score=125.08 Aligned_cols=143 Identities=16% Similarity=0.206 Sum_probs=103.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCH-HHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLK-EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~-ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+.||+|+|+|.+|+.+++.+.+.++++++ |++|+. +++. ... ... ... +..+++.++|+|+.|+|
T Consensus 3 kIRVgIVG~GnIGr~~a~al~~~pd~ELVgV~dr~~~~~~~---~~~---~v~--~~~-----d~~e~l~~iDVViIctP 69 (324)
T TIGR01921 3 KIRAAIVGYGNLGRSVEKAIQQQPDMELVGVFSRRGAETLD---TET---PVY--AVA-----DDEKHLDDVDVLILCMG 69 (324)
T ss_pred CcEEEEEeecHHHHHHHHHHHhCCCcEEEEEEcCCcHHHHh---hcC---Ccc--ccC-----CHHHhccCCCEEEEcCC
Confidence 57999999999999999999988889954 678885 3332 222 111 111 23444578999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccC----ChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASY----LSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Sy----vs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
...|.+.+..|+++|+|+||..+ .++...++++.|+++|-..+...|+|||++.+.-. +.+.---.| ..++.
T Consensus 70 s~th~~~~~~~L~aG~NVV~s~~~h~~~p~~~~~ld~AAk~~g~vsvi~~GwDPG~~si~r~--~~ea~lp~g--~~yt~ 145 (324)
T TIGR01921 70 SATDIPEQAPYFAQFANTVDSFDNHRDIPRHRQVMDAAAKAAGNVSVISTGWDPGMFSINRV--YGEAVLPKG--QTYTF 145 (324)
T ss_pred CccCHHHHHHHHHcCCCEEECCCcccCCHHHHHHHHHHHHHcCCEEEEECCCCcChHHHHHH--HHhccCCCC--cceec
Confidence 99999999999999999999964 34567789999998777767779999999887432 222211112 35666
Q ss_pred ecCCCC
Q psy12817 719 YCGGLP 724 (1201)
Q Consensus 719 ~cGGLP 724 (1201)
|-+|+.
T Consensus 146 wG~g~s 151 (324)
T TIGR01921 146 WGPGLS 151 (324)
T ss_pred cCCCcC
Confidence 666654
|
This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized. |
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.3e-09 Score=122.32 Aligned_cols=142 Identities=18% Similarity=0.199 Sum_probs=109.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhC-CCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRD-ENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~-~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+++||+|||+|.+|+.+++.|.+. ++++++ |++|++++++++++.++.... .+.+++++.++|+|+.|+
T Consensus 5 ~~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~---------~~~~eell~~~D~Vvi~t 75 (271)
T PRK13302 5 PELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPP---------VVPLDQLATHADIVVEAA 75 (271)
T ss_pred CeeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcc---------cCCHHHHhcCCCEEEECC
Confidence 358999999999999999999873 678865 889999999998887632121 123556677899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccCC-hHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeec
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASYL-SPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYC 720 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Syv-s~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~c 720 (1201)
|...|.+++..|+++|+|+++.+.. ..+.++|.+.|+++|+.++...|+--|+|.+-+. ..|+++.+...+
T Consensus 76 p~~~h~e~~~~aL~aGk~Vi~~s~gal~~~~~L~~~A~~~g~~l~v~sGa~~g~d~l~~g--------~iG~~~~v~~~t 147 (271)
T PRK13302 76 PASVLRAIVEPVLAAGKKAIVLSVGALLRNEDLIDLARQNGGQIIVPTGALLGLDAVTAA--------AEGTIHSVKMIT 147 (271)
T ss_pred CcHHHHHHHHHHHHcCCcEEEecchhHHhHHHHHHHHHHcCCEEEEcchHHHhHHHHHHH--------HcCCceEEEEEE
Confidence 9999999999999999999998743 2256788899999999998888876666543222 126677776655
Q ss_pred CC
Q psy12817 721 GG 722 (1201)
Q Consensus 721 GG 722 (1201)
..
T Consensus 148 rk 149 (271)
T PRK13302 148 RK 149 (271)
T ss_pred ec
Confidence 43
|
|
| >COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.2e-09 Score=121.95 Aligned_cols=146 Identities=22% Similarity=0.274 Sum_probs=111.6
Q ss_pred CCCeEEEEcCchhH-HHHHHHHHhCCC-Ce-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEE
Q psy12817 564 ESRNVLLLGAGYVS-RPLIEYLHRDEN-IH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVV 638 (1201)
Q Consensus 564 ~mkKVLILGAG~VG-~~va~~La~~~~-~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVI 638 (1201)
+++||+|||+|.++ ..++..+...++ ++ +.++|+++++++++++.+ ++.. + .+++++++++ .|+|+
T Consensus 2 ~~irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~-~~~~----~----~~~~~~ll~~~~iD~V~ 72 (342)
T COG0673 2 KMIRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEF-GIAK----A----YTDLEELLADPDIDAVY 72 (342)
T ss_pred CeeEEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHc-CCCc----c----cCCHHHHhcCCCCCEEE
Confidence 57899999998655 568888887766 35 778899999999999998 4431 1 2356777764 79999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcE
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKV 713 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV 713 (1201)
.|+|..+|.+++.+|+++|||++++.. ..++.++|.+.|+++|+.++.+ ..++|.+-. +.+++++- ..|++
T Consensus 73 Iatp~~~H~e~~~~AL~aGkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf~p~~~~--~k~li~~g--~lG~v 148 (342)
T COG0673 73 IATPNALHAELALAALEAGKHVLCEKPLALTLEEAEELVELARKAGVKLMVGFNRRFDPAVQA--LKELIDSG--ALGEV 148 (342)
T ss_pred EcCCChhhHHHHHHHHhcCCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeehhhhcCHHHHH--HHHHHhcC--CcCce
Confidence 999999999999999999999999975 5667888999999999988764 458876543 23334332 33788
Q ss_pred EEEEeecCC
Q psy12817 714 ESFVSYCGG 722 (1201)
Q Consensus 714 ~sf~s~cGG 722 (1201)
.++......
T Consensus 149 ~~~~~~~~~ 157 (342)
T COG0673 149 VSVQASFSR 157 (342)
T ss_pred EEEEEEeec
Confidence 887765443
|
|
| >PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.8e-09 Score=102.70 Aligned_cols=111 Identities=21% Similarity=0.323 Sum_probs=93.8
Q ss_pred CeEEEEcCchhHHHHHHHHHhC-CCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRD-ENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~-~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~l 641 (1201)
+||+|||+|.+|+.....+.+. +++++ .++|+++++++++++.+ ++. .. .+++++++ +.|+|+.++
T Consensus 1 i~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~-~~~-~~--------~~~~~ll~~~~~D~V~I~t 70 (120)
T PF01408_consen 1 IRVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKY-GIP-VY--------TDLEELLADEDVDAVIIAT 70 (120)
T ss_dssp EEEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHT-TSE-EE--------SSHHHHHHHTTESEEEEES
T ss_pred CEEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHh-ccc-ch--------hHHHHHHHhhcCCEEEEec
Confidence 4899999999999999888877 67774 58999999999988887 555 21 23555655 799999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
|...|.++++.|+++|+|++.+.. ..++.++|.+.++++|+.++.
T Consensus 71 p~~~h~~~~~~~l~~g~~v~~EKP~~~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 71 PPSSHAEIAKKALEAGKHVLVEKPLALTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SGGGHHHHHHHHHHTTSEEEEESSSSSSHHHHHHHHHHHHHHTSCEEE
T ss_pred CCcchHHHHHHHHHcCCEEEEEcCCcCCHHHHHHHHHHHHHhCCEEEE
Confidence 999999999999999999999965 567889999999999998764
|
GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A .... |
| >KOG0172|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=3e-11 Score=137.57 Aligned_cols=324 Identities=15% Similarity=0.050 Sum_probs=230.2
Q ss_pred EEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCCCCCCchHHhhcCcEEccCcc----CCcEEEEecCCCc-cCCCC
Q psy12817 7 IRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS----EASIIFGVKQVPV-DLLLP 81 (1201)
Q Consensus 7 I~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sagr~f~D~eY~~AGA~I~edls----~adiIlgVKepp~-~~L~~ 81 (1201)
+++|. ++.|-|++|+|-.++.|+.+|+...+|.+-.+.|-|.+|++.|..+++.-+ +.+++.|+|+.++ +.+..
T Consensus 62 L~~~v-~~~D~viSLlP~t~h~lVaK~~i~~~~~~vtsSyv~pe~~~L~~~~v~AG~ti~~e~gldpGidhm~a~~ti~~ 140 (445)
T KOG0172|consen 62 LRKEV-KPLDLVISLLPYTFHPLVAKGCIITKEDSVTSSYVDPELEELEKAAVPAGSTIMNEIGLDPGIDHMPAMKTIDL 140 (445)
T ss_pred HHhhh-cccceeeeeccchhhHHHHHHHHHhhcccccccccCHHHHhhhhhccCCCceEecccccCcchhhhhhhccchH
Confidence 34663 889999999999999999999999999999999999999999999986532 6799999999988 44445
Q ss_pred CcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccCCCCcccc
Q psy12817 82 NKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHI 161 (1201)
Q Consensus 82 ~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~tPfl~l 161 (1201)
-+.+..|.|.+|.|..-.+.+...-.-.-..||||-.-...+.|.-||+..+|-+|....-. +...+... .-.|++.
T Consensus 141 vh~hgg~i~sf~sycGglpape~s~nplgykfsws~~gvl~a~rnsAky~~~Gkiv~v~g~~-~~~~~~~~-~~~pg~a- 217 (445)
T KOG0172|consen 141 VHEHGGKIKSFKSYCGGLPAPERSNNPLGYKFSWSPLGVLLALRNSAKYYKNGKIVEVDGGD-LADTATHY-DFYPGPA- 217 (445)
T ss_pred HHhhcceeeehhhhcCCccChhhCCCCcceeeccchhhhhhhccccchhccCCeEEEecccc-HHhhccCc-ccCcccc-
Confidence 67889999999999888888888888889999999998888999999999999888654331 22221111 1123333
Q ss_pred CCCccccC------------hHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchh
Q psy12817 162 GPAHNYRN------------SMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQK 229 (1201)
Q Consensus 162 ~~~~~y~~------------~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~ 229 (1201)
..-|+| ..+|++++| |++ ...|..-+|-+-|.+|.+|.+.+..++.+
T Consensus 218 --l~~yPNrdst~y~evy~I~~ea~tilr--------gtl--ryqgf~~~i~aL~~~G~~~~da~~~~~~~--------- 276 (445)
T KOG0172|consen 218 --LECYPNRDSTEYSEVYGIPREAKTILR--------GTL--RYQGFVLIIGALVRCGLLACDALEKFSIP--------- 276 (445)
T ss_pred --ccccCCcchhhHHHHhcchHHHHHHHh--------ccc--ccccHHHHHHHHHHcCccchhhHhhcCCC---------
Confidence 334555 125555444 222 12344344445599999999998888743
Q ss_pred hhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccC
Q psy12817 230 VAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLR 309 (1201)
Q Consensus 230 ~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmk 309 (1201)
-..-+|+.++.+.+++|+.. +..|+-+||.|-..+.||.++.- +.|
T Consensus 277 ------------an~L~W~~~~~~~~g~~~~i------------------~ed~i~~i~~~~~~~~~~~l~~~--e~L-- 322 (445)
T KOG0172|consen 277 ------------ANILTWKELLTSLGGPFSEI------------------EEDDIKVICIYLSGKDPRILSTL--EWL-- 322 (445)
T ss_pred ------------CCcccHHHHHHhhcCCCcCc------------------cHHHHHHHHHHhhcCccchhhhh--Hhc--
Confidence 13557888888888888762 24567778888777777555432 232
Q ss_pred CCCCCCCCCCCCCCCCCCceeEEEeeccCCC---CCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCC
Q psy12817 310 PNHMPWLPTSDGAPPLPHRLLGICDISADPG---GSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQ 386 (1201)
Q Consensus 310 pg~~~~~~~~~~~~~~p~rlsvIvDIS~D~G---GsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~ 386 (1201)
| . ...|+...+|.+||.= -.+......|+.|.|+...+ -..+.++-....++++|.+
T Consensus 323 -g----------~--~~~k~v~~~~~~~DTl~~~l~~~l~y~~~e~Dmvvl~h~-------~~~~~p~g~~e~~t~~l~~ 382 (445)
T KOG0172|consen 323 -G----------L--FSDKLVTVRGVSLDTLCPHLEEPLYYVDTEFDMVVLQHK-------FGTEPPEGKVESITHTLVL 382 (445)
T ss_pred -C----------C--CccccccccCCchhccccccccceeccCCccceeEEEec-------ceeeCCCCceEEeeecHhh
Confidence 1 1 1246788889999952 11223334444444442211 0234455566899999999
Q ss_pred chHHHHHHHHHHhHHHHHHHHhc
Q psy12817 387 LPMEATDFFGNLVFPYALDILQS 409 (1201)
Q Consensus 387 LP~eAS~~fs~~L~pyl~~l~~~ 409 (1201)
+|+++++.|+..++++...|...
T Consensus 383 yg~~ng~samaktVg~p~ai~~~ 405 (445)
T KOG0172|consen 383 YGRENGESAMAKTVGSPTAIAAK 405 (445)
T ss_pred cCCccchhHHHHhcCchHhhhhh
Confidence 99999999999999999988643
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.8e-09 Score=107.15 Aligned_cols=130 Identities=21% Similarity=0.291 Sum_probs=98.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.+.++|+|+|+|.+|+.+++.|.+.+..+|++++|+.++++++++.+. ...+..++.+ ..++++++|+||+|+|
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~Dvvi~~~~ 90 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG-ELGIAIAYLD-----LEELLAEADLIINTTP 90 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh-hcccceeecc-----hhhccccCCEEEeCcC
Confidence 346899999999999999999988755679999999999988887652 2111123333 4455789999999999
Q ss_pred Cccc----HHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHh
Q psy12817 643 YNLH----HHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 643 ~~~h----~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei 706 (1201)
...| ....+.+++.++.++|.+|.++.. ++.+.++++|+.++++.- |+..+.+.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~-~l~~~~~~~g~~~v~g~~-------~~~~q~~~~~ 150 (155)
T cd01065 91 VGMKPGDELPLPPSLLKPGGVVYDVVYNPLET-PLLKEARALGAKTIDGLE-------MLVYQAAEAF 150 (155)
T ss_pred CCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCC-HHHHHHHHCCCceeCCHH-------HHHHHHHHHH
Confidence 8775 334467789999999999986655 888999999998887443 4555554444
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK11579 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.4e-08 Score=117.17 Aligned_cols=142 Identities=20% Similarity=0.229 Sum_probs=106.4
Q ss_pred CCeEEEEcCchhHH-HHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSR-PLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~-~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+.||+|||+|.+|+ .++..+.+.+++++ .|+|++.++++ +.++.... .++++++++ +.|+|+.|
T Consensus 4 ~irvgiiG~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~---~~~~~~~~---------~~~~~ell~~~~vD~V~I~ 71 (346)
T PRK11579 4 KIRVGLIGYGYASKTFHAPLIAGTPGLELAAVSSSDATKVK---ADWPTVTV---------VSEPQHLFNDPNIDLIVIP 71 (346)
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHH---hhCCCCce---------eCCHHHHhcCCCCCEEEEc
Confidence 47999999999998 57788877778885 57899987654 34433322 124566665 58999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEe--ccccCchhHHHHHHHHHHHhhhcCCcEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLN--EVGLDPGIDHLLAMECIDAAHLNGGKVES 715 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~--e~GlDPGIdhmlA~~~idei~~~ggkV~s 715 (1201)
+|..+|.+++..|+++|+|++++.. ..++.++|.+.|+++|+.++. ...++|.+..+ .+.+++- .-|+|..
T Consensus 72 tp~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~--k~~i~~g--~iG~i~~ 147 (346)
T PRK11579 72 TPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTL--KALLAEG--VLGEVAY 147 (346)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHH--HHHHhcC--CCCCeEE
Confidence 9999999999999999999999975 456788999999999998765 35688876554 3333321 2378888
Q ss_pred EEeecCC
Q psy12817 716 FVSYCGG 722 (1201)
Q Consensus 716 f~s~cGG 722 (1201)
+.+.++.
T Consensus 148 ~~~~~~~ 154 (346)
T PRK11579 148 FESHFDR 154 (346)
T ss_pred EEEEecc
Confidence 8776543
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.4e-08 Score=109.08 Aligned_cols=137 Identities=20% Similarity=0.216 Sum_probs=99.8
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
++.-.+++|+|.|.+|+.....++.+| .++.+++....+...... .|. .. -.+.
T Consensus 148 ~l~gk~v~IiG~G~iG~avA~~L~~~G----------------~~V~v~~R~~~~~~~~~~-~g~--~~-------~~~~ 201 (287)
T TIGR02853 148 TIHGSNVMVLGFGRTGMTIARTFSALG----------------ARVFVGARSSADLARITE-MGL--IP-------FPLN 201 (287)
T ss_pred CCCCCEEEEEcChHHHHHHHHHHHHCC----------------CEEEEEeCCHHHHHHHHH-CCC--ee-------ecHH
Confidence 344578999999999999999999998 345666654433222211 121 11 1111
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCC-eeeecccc
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGS-IEFMNECT 350 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGs-iE~~~~~T 350 (1201)
.. .+.++.+|+||||+-. .+++.+.++. |+++ .+|+|+++++||. ++.
T Consensus 202 -~l-~~~l~~aDiVint~P~-----~ii~~~~l~~-~k~~------------------aliIDlas~Pg~tdf~~----- 250 (287)
T TIGR02853 202 -KL-EEKVAEIDIVINTIPA-----LVLTADVLSK-LPKH------------------AVIIDLASKPGGTDFEY----- 250 (287)
T ss_pred -HH-HHHhccCCEEEECCCh-----HHhCHHHHhc-CCCC------------------eEEEEeCcCCCCCCHHH-----
Confidence 11 3457789999999732 2678888888 8998 8999999999883 221
Q ss_pred CCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCc-hHHHHHHHHHHhHHHHH
Q psy12817 351 TIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQL-PMEATDFFGNLVFPYAL 404 (1201)
Q Consensus 351 Tid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~L-P~eAS~~fs~~L~pyl~ 404 (1201)
.+..|+.++..++||..+ |++|.+..++.+..+|.
T Consensus 251 -------------------Ak~~G~~a~~~~glPg~~ap~ta~~i~~~~~~~~~~ 286 (287)
T TIGR02853 251 -------------------AKKRGIKALLAPGLPGIVAPKTAGKILANVLSELLL 286 (287)
T ss_pred -------------------HHHCCCEEEEeCCCCcccCchhHHHHHHHHHHHHhh
Confidence 456799999999999999 99999999999887764
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.5e-09 Score=116.29 Aligned_cols=136 Identities=19% Similarity=0.273 Sum_probs=103.3
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.++..|...+-.+|+|++|+.++++++++.+.....+.++. .+.+.+.++|+||||+|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~------~~~~~~~~~DivInaTp 194 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL------ELQEELADFDLIINATS 194 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc------cchhccccCCEEEECCc
Confidence 456899999999999999999998765789999999999999988764221111111 23456678999999999
Q ss_pred CcccH-----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEE
Q psy12817 643 YNLHH-----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFV 717 (1201)
Q Consensus 643 ~~~h~-----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~ 717 (1201)
..++. ++...++..++.++|+.|.+. ...|.+.|+++|+.++++.+ |+..+.+.+ |+
T Consensus 195 ~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~-~T~ll~~A~~~G~~~~~G~~-------Ml~~Qa~~~----------f~ 256 (278)
T PRK00258 195 AGMSGELPLPPLPLSLLRPGTIVYDMIYGPL-PTPFLAWAKAQGARTIDGLG-------MLVHQAAEA----------FE 256 (278)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEeecCCC-CCHHHHHHHHCcCeecCCHH-------HHHHHHHHH----------HH
Confidence 87753 455678889999999999654 45677899999999988655 566665544 45
Q ss_pred eecCC
Q psy12817 718 SYCGG 722 (1201)
Q Consensus 718 s~cGG 722 (1201)
.|+|-
T Consensus 257 ~wtg~ 261 (278)
T PRK00258 257 LWTGV 261 (278)
T ss_pred HHcCC
Confidence 77774
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.4e-08 Score=113.07 Aligned_cols=131 Identities=20% Similarity=0.293 Sum_probs=101.3
Q ss_pred CCeEEEEcC-chhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGA-GYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGA-G~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|+||+|+|+ |+||+.+++.+.+.+++++ .++|++.++++.. ..+ ++.. .++++++++++|+||+++|
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-~~~--------~i~~--~~dl~~ll~~~DvVid~t~ 69 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-GAL--------GVAI--TDDLEAVLADADVLIDFTT 69 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-CCC--------Cccc--cCCHHHhccCCCEEEECCC
Confidence 579999998 9999999999988778884 4688887765543 111 2211 3457777778999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHh
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei 706 (1201)
+..|.++++.|+++|+|+|... +..++..+|.+.+++.++.+.+.+.+-+++...++.+....+
T Consensus 70 p~~~~~~~~~al~~G~~vvigttG~s~~~~~~l~~aa~~~~v~~s~n~s~g~~~~~~l~~~aa~~l 135 (257)
T PRK00048 70 PEATLENLEFALEHGKPLVIGTTGFTEEQLAELEEAAKKIPVVIAPNFSIGVNLLMKLAEKAAKYL 135 (257)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999763 466778888886677777777777777777777777666555
|
|
| >PRK10206 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.2e-08 Score=113.41 Aligned_cols=144 Identities=18% Similarity=0.209 Sum_probs=105.0
Q ss_pred CCeEEEEcCchhHH-HHHHHHHh-CCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 565 SRNVLLLGAGYVSR-PLIEYLHR-DENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~-~va~~La~-~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
|.||+|||+|.+++ .++..+.. .++++| .|+|++.+++ +.++.++.+. +. ++++++++ +.|+|+.
T Consensus 1 ~irvgiiG~G~~~~~~h~~~~~~~~~~~~l~av~d~~~~~~-~~~~~~~~~~-----~~----~~~~ell~~~~iD~V~I 70 (344)
T PRK10206 1 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPE-EQAPIYSHIH-----FT----SDLDEVLNDPDVKLVVV 70 (344)
T ss_pred CeEEEEECCCHHHhheehhhHhcCCCCEEEEEEEcCChhHH-HHHHhcCCCc-----cc----CCHHHHhcCCCCCEEEE
Confidence 57999999999764 45666644 356775 5899988655 5666664332 11 24666664 6899999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVE 714 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~ 714 (1201)
|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.. ..++|.+.. +++++++- .-|+|.
T Consensus 71 ~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~--~k~li~~g--~iG~i~ 146 (344)
T PRK10206 71 CTHADSHFEYAKRALEAGKNVLVEKPFTPTLAEAKELFALAKSKGLTVTPYQNRRFDSCFLT--AKKAIESG--KLGEIV 146 (344)
T ss_pred eCCchHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHhCCEEEEEEeeeECHHHHH--HHHHHHcC--CCCCeE
Confidence 99999999999999999999999975 4578889999999999987754 468886433 23344331 237888
Q ss_pred EEEeecCC
Q psy12817 715 SFVSYCGG 722 (1201)
Q Consensus 715 sf~s~cGG 722 (1201)
++.+.++.
T Consensus 147 ~i~~~~~~ 154 (344)
T PRK10206 147 EVESHFDY 154 (344)
T ss_pred EEEEEecc
Confidence 88876654
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.9e-08 Score=113.65 Aligned_cols=137 Identities=19% Similarity=0.244 Sum_probs=100.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC-eeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR-VEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~-v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
..++|+|||+|.+|++++..|...+-.+|+|++|+.++++.+++.+.. .....+.. .+.+.+.++++|+||||+|
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~----~~~~~~~~~~aDiVInaTp 201 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA----GSDLAAALAAADGLVHATP 201 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe----ccchHhhhCCCCEEEECCc
Confidence 458999999999999999999987655799999999999999876521 11111111 1235556788999999998
Q ss_pred CcccH----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 643 YNLHH----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 643 ~~~h~----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
..++. ++....++.+.-++|+.|.+.+. .+.+.|+++|+.++++.+ |+..+.+.+ |+.
T Consensus 202 ~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T-~ll~~A~~~G~~~~~G~~-------ML~~Qa~~~----------f~~ 263 (284)
T PRK12549 202 TGMAKHPGLPLPAELLRPGLWVADIVYFPLET-ELLRAARALGCRTLDGGG-------MAVFQAVDA----------FEL 263 (284)
T ss_pred CCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCC-HHHHHHHHCCCeEecCHH-------HHHHHHHHH----------HHH
Confidence 76532 23345577788899999976554 566899999999998666 566665544 457
Q ss_pred ecCC
Q psy12817 719 YCGG 722 (1201)
Q Consensus 719 ~cGG 722 (1201)
|+|-
T Consensus 264 wtg~ 267 (284)
T PRK12549 264 FTGR 267 (284)
T ss_pred hcCC
Confidence 8874
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=6.1e-08 Score=109.69 Aligned_cols=139 Identities=17% Similarity=0.297 Sum_probs=105.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
+.++++|+|+|.+|++++..|++.+-.+|+|++|+. ++++++++.+ +.+.....|+.+ .+.+.+.++++|+
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~--~~~~~~~~~~~Di 202 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLND--TEKLKAEIASSDI 202 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhh--hhHHHhhhccCCE
Confidence 457999999999999999999987544699999996 7787777654 234455677776 6678888889999
Q ss_pred EEEcCCCcccH-----HH-HHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcC
Q psy12817 637 VVSLLPYNLHH-----HV-AEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNG 710 (1201)
Q Consensus 637 VIs~lP~~~h~-----~V-akacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~g 710 (1201)
||||+|..+++ ++ ....+..+..++|+.|.+.+ ..|.+.|+++|..++++.+ |+..+.+.+
T Consensus 203 lINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~-T~ll~~A~~~G~~~~~G~~-------ML~~Qa~~~----- 269 (289)
T PRK12548 203 LVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNPKK-TKLLEDAEAAGCKTVGGLG-------MLLWQGAEA----- 269 (289)
T ss_pred EEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCCCC-CHHHHHHHHCCCeeeCcHH-------HHHHHHHHH-----
Confidence 99999977643 12 23456778889999997665 4455889999999998766 566665544
Q ss_pred CcEEEEEeecCC
Q psy12817 711 GKVESFVSYCGG 722 (1201)
Q Consensus 711 gkV~sf~s~cGG 722 (1201)
|+.|+|-
T Consensus 270 -----f~lwtg~ 276 (289)
T PRK12548 270 -----YKLYTGK 276 (289)
T ss_pred -----HHHhcCC
Confidence 4578874
|
|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.7e-08 Score=108.16 Aligned_cols=126 Identities=22% Similarity=0.261 Sum_probs=91.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|+||+|+|+|.||+.+++.|.+.++.++. ++++.. ..++....+. ++. +.+ +++++-.+.|+||.|+|
T Consensus 1 m~rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~-~~~~~~~~~~~~~~-----~~~----d~~~l~~~~DvVve~t~ 70 (265)
T PRK13303 1 MMKVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEH-SIDAVRRALGEAVR-----VVS----SVDALPQRPDLVVECAG 70 (265)
T ss_pred CcEEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCC-CHHHHhhhhccCCe-----eeC----CHHHhccCCCEEEECCC
Confidence 68999999999999999999988777754 344432 2222222221 111 111 23333346999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccC---ChHH-HHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASY---LSPE-MMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Sy---vs~e-~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
...|.+++..|+++|+|+++++. ..++ ...|.+.|++.|+.++...|+..|+|-+-+.
T Consensus 71 ~~~~~e~~~~aL~aGk~Vvi~s~~Al~d~~~~~~L~~~A~~~g~~l~v~sga~gg~d~l~~~ 132 (265)
T PRK13303 71 HAALKEHVVPILKAGIDCAVISVGALADEALRERLEQAAEAGGARLHLLSGAIGGIDALAAA 132 (265)
T ss_pred HHHHHHHHHHHHHcCCCEEEeChHHhcCHHHHHHHHHHHHHCCCEEEEeChHhhCHHHHHHH
Confidence 99999999999999999999875 2344 4678889999999999889988887766443
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.8e-08 Score=110.40 Aligned_cols=140 Identities=16% Similarity=0.225 Sum_probs=99.7
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC-eeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR-VEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~-v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+.++|+|+|+|.+|++++..|.+.+-.+|+|++|+.++++++++.+.. .......+.+ ...+.+.+.++|+|||++|
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~--~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD--ARGIEDVIAAADGVVNATP 203 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC--HhHHHHHHhhcCEEEEcCC
Confidence 357999999999999999999987666899999999999999876521 1100111122 2233445567999999999
Q ss_pred CcccH----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 643 YNLHH----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 643 ~~~h~----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
..++. ++-...+..+.-++|+.|.+.++. +.+.|+++|..++++.+ |+..+.+. +|+.
T Consensus 204 ~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~-ll~~A~~~G~~~~~Gl~-------MLv~Qa~~----------~f~l 265 (283)
T PRK14027 204 MGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETE-LLKAARALGCETLDGTR-------MAIHQAVD----------AFRL 265 (283)
T ss_pred CCCCCCCCCCCCHHHcCCCcEEEEcccCCCCCH-HHHHHHHCCCEEEccHH-------HHHHHHHH----------HHHH
Confidence 77642 233355677778999999765544 45889999999998766 55555443 4567
Q ss_pred ecCCC
Q psy12817 719 YCGGL 723 (1201)
Q Consensus 719 ~cGGL 723 (1201)
|+|-.
T Consensus 266 w~G~~ 270 (283)
T PRK14027 266 FTGLE 270 (283)
T ss_pred HhCCC
Confidence 88754
|
|
| >TIGR01761 thiaz-red thiazolinyl imide reductase | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.8e-07 Score=108.27 Aligned_cols=121 Identities=12% Similarity=0.117 Sum_probs=95.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCC-CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDE-NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~-~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+..||+|+|+ ++|+..++.+.+.+ +++ +.|+|++.++++++++++ ++.. ..++++++++.|+++.++
T Consensus 2 ~~~rVgViG~-~~G~~h~~al~~~~~~~eLvaV~d~~~erA~~~A~~~-gi~~---------y~~~eell~d~Di~~V~i 70 (343)
T TIGR01761 2 DVQSVVVCGT-RFGQFYLAAFAAAPERFELAGILAQGSERSRALAHRL-GVPL---------YCEVEELPDDIDIACVVV 70 (343)
T ss_pred CCcEEEEEeH-HHHHHHHHHHHhCCCCcEEEEEEcCCHHHHHHHHHHh-CCCc---------cCCHHHHhcCCCEEEEEe
Confidence 3589999999 56999999998876 677 668999999999999988 4441 124666666666666655
Q ss_pred ----CCcccHHHHHHHHHcCCeEEEccCC-hHHHHHHHHHHHHcCCEEEeccccCchhHH
Q psy12817 642 ----PYNLHHHVAEFCIQHGKNLVTASYL-SPEMMALHERAASAGITVLNEVGLDPGIDH 696 (1201)
Q Consensus 642 ----P~~~h~~VakacIeaGkh~VD~Syv-s~e~~eLde~AkeAGVtil~e~GlDPGIdh 696 (1201)
|...|.+++++|+++|+|++++..+ .++.++|.+.|+++|+.++. .-+.|.+..
T Consensus 71 pt~~P~~~H~e~a~~aL~aGkHVL~EKPla~~Ea~el~~~A~~~g~~l~v-~~f~p~~~~ 129 (343)
T TIGR01761 71 RSAIVGGQGSALARALLARGIHVLQEHPLHPRDIQDLLRLAERQGRRYLV-NTFYPHLPA 129 (343)
T ss_pred CCCCCCccHHHHHHHHHhCCCeEEEcCCCCHHHHHHHHHHHHHcCCEEEE-EecCHHHHH
Confidence 4579999999999999999999864 45788899999999999885 347776443
|
This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG). |
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.7e-08 Score=107.77 Aligned_cols=130 Identities=17% Similarity=0.252 Sum_probs=95.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeE-EEEeCC-HHHH-HHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHI-TLGSLL-KEDI-DKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~V-tVadR~-~ekA-e~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
|+||+|+| +|+||+.+++.+.+.+++++ .++||. .+.. +.+.... +....-+.+.+ +++++..++|+||.+
T Consensus 1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d~~~~~~~~~~~~~~~-~~~~~gv~~~~----d~~~l~~~~DvVIdf 75 (266)
T TIGR00036 1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFERHGSSLQGTDAGELA-GIGKVGVPVTD----DLEAVETDPDVLIDF 75 (266)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccCCCHHHhc-CcCcCCceeeC----CHHHhcCCCCEEEEC
Confidence 57999999 69999999999998888884 456743 2221 1111111 11000011222 244443569999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLA 699 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA 699 (1201)
+|+..|.++++.|+++|+|+|..+ +..++.++|.+.|+++|+.++....++.|+.-|+.
T Consensus 76 T~p~~~~~~~~~al~~g~~vVigttg~~~e~~~~l~~aA~~~g~~v~~a~NfSlGv~ll~~ 136 (266)
T TIGR00036 76 TTPEGVLNHLKFALEHGVRLVVGTTGFSEEDKQELADLAEKAGIAAVIAPNFSIGVNLMFK 136 (266)
T ss_pred CChHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHhcCCccEEEECcccHHHHHHHH
Confidence 999999999999999999999864 56678889999999999999999999999876654
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=98.68 E-value=1e-07 Score=107.62 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=97.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.++|+|||+|.+|++++..|.+.+-.+|+|++|+.++++++++.+.....+ ..+.. .+++.+.+.++|+||||+|.
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~-~~~~~--~~~~~~~~~~~DiVInaTp~ 200 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVI-TRLEG--DSGGLAIEKAAEVLVSTVPA 200 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcc-eeccc--hhhhhhcccCCCEEEECCCC
Confidence 4579999999999999999999876667999999999999999876321111 11111 13455667889999999997
Q ss_pred cccHH--HHHHH--------HHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcE
Q psy12817 644 NLHHH--VAEFC--------IQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKV 713 (1201)
Q Consensus 644 ~~h~~--Vakac--------IeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV 713 (1201)
.+... ....+ +..+..++|+-|.+.+ ..|.+.|+++|..++++.+ |+..+.+.+
T Consensus 201 g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~-T~ll~~A~~~G~~~~~Gl~-------MLv~Qa~~~-------- 264 (282)
T TIGR01809 201 DVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWP-TPLVAIVSAAGWRVISGLQ-------MLLHQGFAQ-------- 264 (282)
T ss_pred CCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCC-CHHHHHHHHCCCEEECcHH-------HHHHHHHHH--------
Confidence 65322 11111 2346679999997554 4455889999999998666 566554444
Q ss_pred EEEEeecCC
Q psy12817 714 ESFVSYCGG 722 (1201)
Q Consensus 714 ~sf~s~cGG 722 (1201)
|+.|+|-
T Consensus 265 --f~lwtg~ 271 (282)
T TIGR01809 265 --FEQWTGM 271 (282)
T ss_pred --HHHHHCC
Confidence 4578874
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >KOG2741|consensus | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.3e-07 Score=102.82 Aligned_cols=151 Identities=18% Similarity=0.222 Sum_probs=116.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCC--CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDE--NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLV 637 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~--~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVV 637 (1201)
....|++|+|+|.+++-.++.|...+ +++ |.|++|+.++|+++|+.+ ++. ...+ ...+++++++ +|+|
T Consensus 4 s~~ir~Gi~g~g~ia~~f~~al~~~p~s~~~Ivava~~s~~~A~~fAq~~-~~~--~~k~----y~syEeLakd~~vDvV 76 (351)
T KOG2741|consen 4 SATIRWGIVGAGRIARDFVRALHTLPESNHQIVAVADPSLERAKEFAQRH-NIP--NPKA----YGSYEELAKDPEVDVV 76 (351)
T ss_pred CceeEEEEeehhHHHHHHHHHhccCcccCcEEEEEecccHHHHHHHHHhc-CCC--CCcc----ccCHHHHhcCCCcCEE
Confidence 34579999999999999999987655 666 568999999999999986 331 1112 2357777775 6999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEecc--ccCchhHHHHHHHHHHHhh-hcCC
Q psy12817 638 VSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNEV--GLDPGIDHLLAMECIDAAH-LNGG 711 (1201)
Q Consensus 638 Is~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e~--GlDPGIdhmlA~~~idei~-~~gg 711 (1201)
+..+|...|.+++..|+++|||++++.. ..++.+++-++|+++|+.+|.++ .+.|-..- +.+.+. ..-|
T Consensus 77 yi~~~~~qH~evv~l~l~~~K~VL~EKPla~n~~e~~~iveaA~~rgv~~meg~~~R~~P~~~~-----lke~l~~~~~G 151 (351)
T KOG2741|consen 77 YISTPNPQHYEVVMLALNKGKHVLCEKPLAMNVAEAEEIVEAAEARGVFFMEGLWWRFFPRYAK-----LKELLSSGVLG 151 (351)
T ss_pred EeCCCCccHHHHHHHHHHcCCcEEecccccCCHHHHHHHHHHHHHcCcEEEeeeeeecCcHHHH-----HHHHHhccccc
Confidence 9999999999999999999999999975 56788999999999999998754 46664332 122232 2347
Q ss_pred cEEEEEeecCCCCCC
Q psy12817 712 KVESFVSYCGGLPAP 726 (1201)
Q Consensus 712 kV~sf~s~cGGLPaP 726 (1201)
.|.++.+ |.+.|.+
T Consensus 152 dvk~v~~-~~~f~~~ 165 (351)
T KOG2741|consen 152 DVKSVEV-EFGFPFP 165 (351)
T ss_pred cceEEEE-ecCCCcc
Confidence 8889888 7777765
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.6e-08 Score=108.61 Aligned_cols=139 Identities=24% Similarity=0.388 Sum_probs=102.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.++|+|+|+|..+++++..|++.+-.+|+|++|+.++++++++.++.... ...+.+ ...+... .++|+|||++|.
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~~~~~~--~~~~~~~-~~~dliINaTp~ 200 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-AVEAAA--LADLEGL-EEADLLINATPV 200 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-cccccc--ccccccc-cccCEEEECCCC
Confidence 458999999999999999999998777899999999999999988753211 111111 1112211 169999999998
Q ss_pred cccHH-----HHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 644 NLHHH-----VAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 644 ~~h~~-----VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
.++.. +-..++..+.-++|+-|.+.++.-| +.|+++|..++++.| |+..+.+ ++|+.
T Consensus 201 Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL-~~A~~~G~~~idGl~-------Mlv~Qaa----------~aF~l 262 (283)
T COG0169 201 GMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLL-REARAQGAKTIDGLG-------MLVHQAA----------EAFEL 262 (283)
T ss_pred CCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHH-HHHHHcCCeEECcHH-------HHHHHHH----------HHHHH
Confidence 77543 3357788888899999987655444 889999999988777 4555443 34668
Q ss_pred ecCCCC
Q psy12817 719 YCGGLP 724 (1201)
Q Consensus 719 ~cGGLP 724 (1201)
|+|-.|
T Consensus 263 wtg~~p 268 (283)
T COG0169 263 WTGVEP 268 (283)
T ss_pred HhCCCC
Confidence 888755
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.3e-07 Score=95.53 Aligned_cols=98 Identities=21% Similarity=0.351 Sum_probs=73.9
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+.+.++|+|||+|.+|+.++.+|...+--+|+|++|+.++++++++.+++......+. +++.+.+.++|+||+|+
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~-----~~~~~~~~~~DivI~aT 83 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPL-----EDLEEALQEADIVINAT 83 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG-----GGHCHHHHTESEEEE-S
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeH-----HHHHHHHhhCCeEEEec
Confidence 4678999999999999999999999865569999999999999999885433333343 34667788999999999
Q ss_pred CCcccHHHHHHHHHcC----CeEEEccC
Q psy12817 642 PYNLHHHVAEFCIQHG----KNLVTASY 665 (1201)
Q Consensus 642 P~~~h~~VakacIeaG----kh~VD~Sy 665 (1201)
|..++ .+-+..++.. .-++|+++
T Consensus 84 ~~~~~-~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 84 PSGMP-IITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp STTST-SSTHHHHTTTCHHCSEEEES-S
T ss_pred CCCCc-ccCHHHHHHHHhhhhceecccc
Confidence 87654 3334444444 36888875
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.5e-07 Score=104.86 Aligned_cols=139 Identities=17% Similarity=0.188 Sum_probs=99.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC---HHHHHHHHHHcCC---eeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL---KEDIDKVTNEFGR---VEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~---~ekAe~La~~~~~---v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
+.++++|||+|..+++++..|+..+-.+|+|++|+ .++++++++.++. ......+..+ .+.+.+.+.++|+|
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~--~~~l~~~~~~aDiv 200 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD--QQAFAEALASADIL 200 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhh--hhhhhhhcccCCEE
Confidence 45799999999999999999988766689999999 4689999887632 1111122221 22355566789999
Q ss_pred EEcCCCcccHH------HHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCC
Q psy12817 638 VSLLPYNLHHH------VAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGG 711 (1201)
Q Consensus 638 Is~lP~~~h~~------VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~gg 711 (1201)
|||+|..+.+. .-...++.+..++|+.|.+.+. .|.+.|+++|+.++++.+ |+..+.+.+
T Consensus 201 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-~ll~~A~~~G~~~~~Gl~-------ML~~Qa~~~------ 266 (288)
T PRK12749 201 TNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMT-KLLQQAQQAGCKTIDGYG-------MLLWQGAEQ------ 266 (288)
T ss_pred EECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCccC-HHHHHHHHCCCeEECCHH-------HHHHHHHHH------
Confidence 99999766431 1224466778899999976654 566899999999998766 566665544
Q ss_pred cEEEEEeecCC
Q psy12817 712 KVESFVSYCGG 722 (1201)
Q Consensus 712 kV~sf~s~cGG 722 (1201)
|+.|+|-
T Consensus 267 ----f~lwtg~ 273 (288)
T PRK12749 267 ----FTLWTGK 273 (288)
T ss_pred ----HHHhcCC
Confidence 4578874
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.7e-07 Score=104.96 Aligned_cols=133 Identities=18% Similarity=0.299 Sum_probs=98.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCee-EEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVE-ATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~-~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
..++|+|+|+|.+|++++..|.+.+ .+|++++|+.++++++++.+.... ....+. +. ....++|+||||+|
T Consensus 116 ~~k~vliiGaGg~g~aia~~L~~~g-~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-----~~--~~~~~~DivInatp 187 (270)
T TIGR00507 116 PNQRVLIIGAGGAARAVALPLLKAD-CNVIIANRTVSKAEELAERFQRYGEIQAFSM-----DE--LPLHRVDLIINATS 187 (270)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHhhcCceEEech-----hh--hcccCccEEEECCC
Confidence 4579999999999999999999875 699999999999999887753211 111111 11 12357999999999
Q ss_pred CcccHH-----HHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEE
Q psy12817 643 YNLHHH-----VAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFV 717 (1201)
Q Consensus 643 ~~~h~~-----VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~ 717 (1201)
..++.. +....++.++.++|++|.+++. .|.+.|+++|+.++++.+ |+..+.+.+ |+
T Consensus 188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-~ll~~A~~~G~~~vdG~~-------Ml~~Qa~~~----------f~ 249 (270)
T TIGR00507 188 AGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-PFLAEAKSLGTKTIDGLG-------MLVAQAALA----------FE 249 (270)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-HHHHHHHHCCCeeeCCHH-------HHHHHHHHH----------HH
Confidence 876432 2356678899999999987766 577999999999998665 566665544 45
Q ss_pred eecCC
Q psy12817 718 SYCGG 722 (1201)
Q Consensus 718 s~cGG 722 (1201)
.|+|-
T Consensus 250 ~w~g~ 254 (270)
T TIGR00507 250 LWTGV 254 (270)
T ss_pred HHcCC
Confidence 78874
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.53 E-value=8.3e-07 Score=92.15 Aligned_cols=110 Identities=21% Similarity=0.303 Sum_probs=80.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|+||.+||.|.||+++++.|.+. +++|++.||++++++++.+. ++.. .++..++++++|+|+.|+|..
T Consensus 1 m~~Ig~IGlG~mG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~--g~~~---------~~s~~e~~~~~dvvi~~v~~~ 68 (163)
T PF03446_consen 1 MMKIGFIGLGNMGSAMARNLAKA-GYEVTVYDRSPEKAEALAEA--GAEV---------ADSPAEAAEQADVVILCVPDD 68 (163)
T ss_dssp -BEEEEE--SHHHHHHHHHHHHT-TTEEEEEESSHHHHHHHHHT--TEEE---------ESSHHHHHHHBSEEEE-SSSH
T ss_pred CCEEEEEchHHHHHHHHHHHHhc-CCeEEeeccchhhhhhhHHh--hhhh---------hhhhhhHhhcccceEeecccc
Confidence 79999999999999999999876 68999999999999998875 3332 235677788899999999964
Q ss_pred cc-HHHHH-----HHHHcCCeEEEccCChHH-HHHHHHHHHHcCCEEEe
Q psy12817 645 LH-HHVAE-----FCIQHGKNLVTASYLSPE-MMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h-~~Vak-----acIeaGkh~VD~Syvs~e-~~eLde~AkeAGVtil~ 686 (1201)
-. ..+.. ..++.|+-++|.|..+++ .+++.+.++++|+.++.
T Consensus 69 ~~v~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vd 117 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVD 117 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEE
T ss_pred hhhhhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeee
Confidence 32 22322 334678889999876664 67898999999988764
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.1e-07 Score=102.35 Aligned_cols=127 Identities=21% Similarity=0.268 Sum_probs=95.2
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
++++|+|+|..+++++..|.+.+-.+|+|++|+.++++++++.++ .. ..+ .+. ..++|+||||+|..+
T Consensus 123 ~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~-~~-----~~~----~~~--~~~~dlvINaTp~Gm 190 (272)
T PRK12550 123 LVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG-YE-----WRP----DLG--GIEADILVNVTPIGM 190 (272)
T ss_pred CeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC-Cc-----chh----hcc--cccCCEEEECCcccc
Confidence 589999999999999999998766679999999999999988662 11 111 121 246899999999776
Q ss_pred cH-------HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 646 HH-------HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 646 h~-------~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
+. ++-...+..+.-++|+.|.+.+. .|.+.|+++|..++++.+ |+..+.+.+ |+.
T Consensus 191 ~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T-~ll~~A~~~G~~~i~Gl~-------MLi~Qa~~~----------f~l 252 (272)
T PRK12550 191 AGGPEADKLAFPEAEIDAASVVFDVVALPAET-PLIRYARARGKTVITGAE-------VIALQAVEQ----------FVL 252 (272)
T ss_pred CCCCccccCCCCHHHcCCCCEEEEeecCCccC-HHHHHHHHCcCeEeCCHH-------HHHHHHHHH----------HHH
Confidence 52 24445577778899999986544 455889999999998665 566655444 467
Q ss_pred ecCC
Q psy12817 719 YCGG 722 (1201)
Q Consensus 719 ~cGG 722 (1201)
|+|-
T Consensus 253 wtg~ 256 (272)
T PRK12550 253 YTGV 256 (272)
T ss_pred HhCC
Confidence 8874
|
|
| >PRK06270 homoserine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.6e-06 Score=100.63 Aligned_cols=144 Identities=24% Similarity=0.306 Sum_probs=96.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC---------CCe-EEEEeC----------CHHHHHHHHHHcCCeeEEEeecCCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE---------NIH-ITLGSL----------LKEDIDKVTNEFGRVEATLIDVNNGGS 624 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~---------~~~-VtVadR----------~~ekAe~La~~~~~v~~v~lDV~D~~~ 624 (1201)
..||+|+|+|.||+.+++.|.+.. +++ +.++|+ +.+++..+++........ -+... .
T Consensus 2 ~i~V~IiG~G~VG~~~~~~L~~~~~~~~~~~g~~~~vvai~d~~~~~~~~~Gi~~~~~~~~~~~~~~~~~~-~~~~~--~ 78 (341)
T PRK06270 2 EMKIALIGFGGVGQGVAELLAEKREYLKKRYGLDLKVVAIADSSGSAIDPDGLDLELALKVKEETGKLADY-PEGGG--E 78 (341)
T ss_pred eEEEEEECCCHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCCcccCcCCCCHHHHHHHHhccCCcccC-ccccc--c
Confidence 469999999999999999987652 456 446775 455665555543211110 00000 1
Q ss_pred hHHHhhcc--CCcEEEEcCCCccc-----HHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEecc---ccCc
Q psy12817 625 DNLSGLVR--SADLVVSLLPYNLH-----HHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEV---GLDP 692 (1201)
Q Consensus 625 e~L~elI~--~~DVVIs~lP~~~h-----~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~---GlDP 692 (1201)
.++.+++. ++|+||.|+|...| .++++.|+++|+|+|+.+ ..+....+|.+.|+++|+.++.+. |.-|
T Consensus 79 ~d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A~~~g~~~~~ea~v~~glP 158 (341)
T PRK06270 79 ISGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELAKKNGVRFRYEATVGGAMP 158 (341)
T ss_pred CCHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHHHHcCCEEEEeeeeeechh
Confidence 23455553 68999999998766 678999999999999973 555567789999999999998764 5666
Q ss_pred hhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 693 GIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 693 GIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
-+..+ .+. -.+++|.++..
T Consensus 159 ii~~l------~~~-l~g~~I~~I~G 177 (341)
T PRK06270 159 IINLA------KET-LAGNDIKSIKG 177 (341)
T ss_pred HHHHH------Hhh-cccCceEEEEE
Confidence 55443 222 13566666553
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.3e-06 Score=101.22 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=70.8
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEE-EeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEAT-LIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v-~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+|+||+|+|+ |++|+.+++.|.++++++++.+.++.+..+.++..+++.... ..++.+ .+.. ..+++|+|+.|+
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~--~~~~--~~~~vD~Vf~al 76 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEP--LDPE--ILAGADVVFLAL 76 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeec--CCHH--HhcCCCEEEECC
Confidence 4789999995 999999999999988888655443444444455444433211 112222 2222 346899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEcc
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~S 664 (1201)
|...|.+++..|+++|+|+||.|
T Consensus 77 P~~~~~~~v~~a~~aG~~VID~S 99 (343)
T PRK00436 77 PHGVSMDLAPQLLEAGVKVIDLS 99 (343)
T ss_pred CcHHHHHHHHHHHhCCCEEEECC
Confidence 99999999999999999999997
|
|
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.26 E-value=8.8e-06 Score=88.28 Aligned_cols=136 Identities=21% Similarity=0.276 Sum_probs=105.6
Q ss_pred CeEEEEcCchhHHHHHHHHHhC-CCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRD-ENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~-~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
++|+|+|||.+|..+++.+.+. .+++ +.++||+.++++++.+.++... ..++.+++.+.|+||.|...
T Consensus 1 l~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~----------~s~ide~~~~~DlvVEaAS~ 70 (255)
T COG1712 1 LKVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRC----------VSDIDELIAEVDLVVEAASP 70 (255)
T ss_pred CeEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCc----------cccHHHHhhccceeeeeCCH
Confidence 5899999999999999988764 2455 7889999999999988774322 12467777899999999987
Q ss_pred cccHHHHHHHHHcCCeEEEccC---ChHHHH-HHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEee
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASY---LSPEMM-ALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Sy---vs~e~~-eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~ 719 (1201)
..-.+.+..++++|+|++-+|. ..+..+ .+.+.||..|..+..-.|---|+|-+.+.+ + |.|+++..-
T Consensus 71 ~Av~e~~~~~L~~g~d~iV~SVGALad~~l~erl~~lak~~~~rv~~pSGAiGGlD~l~aar----~----g~i~~V~lt 142 (255)
T COG1712 71 EAVREYVPKILKAGIDVIVMSVGALADEGLRERLRELAKCGGARVYLPSGAIGGLDALAAAR----V----GGIEEVVLT 142 (255)
T ss_pred HHHHHHhHHHHhcCCCEEEEechhccChHHHHHHHHHHhcCCcEEEecCccchhHHHHHHhh----c----CCeeEEEEE
Confidence 6667888999999999999974 444444 466789999999887788888888876653 1 556666543
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=6e-06 Score=93.43 Aligned_cols=110 Identities=17% Similarity=0.274 Sum_probs=85.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
+||.+||.|.||.+++..|.+. +++++|.||+++++.++.... ++.. .+...++++++|+||.|+|..-
T Consensus 1 ~kIafIGLG~MG~pmA~~L~~a-G~~v~v~~r~~~ka~~~~~~~-Ga~~---------a~s~~eaa~~aDvVitmv~~~~ 69 (286)
T COG2084 1 MKIAFIGLGIMGSPMAANLLKA-GHEVTVYNRTPEKAAELLAAA-GATV---------AASPAEAAAEADVVITMLPDDA 69 (286)
T ss_pred CeEEEEcCchhhHHHHHHHHHC-CCEEEEEeCChhhhhHHHHHc-CCcc---------cCCHHHHHHhCCEEEEecCCHH
Confidence 5899999999999999999987 589999999999966655554 3332 2245778889999999999765
Q ss_pred cHHHHH-------HHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 646 HHHVAE-------FCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 646 h~~Vak-------acIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
+..-+- ..++.|+.+||.|.+++ ..+++.+.+++.|+.++.
T Consensus 70 ~V~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lD 118 (286)
T COG2084 70 AVRAVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLD 118 (286)
T ss_pred HHHHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEe
Confidence 533222 22346999999998666 468899999999999875
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.9e-06 Score=77.73 Aligned_cols=88 Identities=22% Similarity=0.276 Sum_probs=68.5
Q ss_pred eEEEEcCchhHHHHHHHHHhCC--CCeEEEE-eCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDE--NIHITLG-SLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~--~~~VtVa-dR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
||+|||+|.||..+++.|.+.+ ..+|+++ +|+++++++++++++ +.... ....++++++|+||.|+|+
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~advvilav~p 71 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG-VQATA--------DDNEEAAQEADVVILAVKP 71 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT-TEEES--------EEHHHHHHHTSEEEE-S-G
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc-ccccc--------CChHHhhccCCEEEEEECH
Confidence 7999999999999999998874 3678855 999999999999884 33221 1355667789999999998
Q ss_pred cccHHHHHHH--HHcCCeEEEc
Q psy12817 644 NLHHHVAEFC--IQHGKNLVTA 663 (1201)
Q Consensus 644 ~~h~~Vakac--IeaGkh~VD~ 663 (1201)
....++++.. ...++.+|+.
T Consensus 72 ~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 72 QQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp GGHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHhhccCCCEEEEe
Confidence 8877877765 6788888886
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.8e-06 Score=98.22 Aligned_cols=95 Identities=21% Similarity=0.309 Sum_probs=78.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+.+.++|+|||+|.||..++.+|.+.+-.+|+|++|+.++|++++.++. ..++. .+.+.+.+.++|+||+++
T Consensus 175 ~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-~~~~~-------l~el~~~l~~~DvVissT 246 (414)
T COG0373 175 SLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-AEAVA-------LEELLEALAEADVVISST 246 (414)
T ss_pred ccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-Ceeec-------HHHHHHhhhhCCEEEEec
Confidence 4578999999999999999999999877789999999999999999984 44332 457888999999999998
Q ss_pred CC---cccHHHHHHHHHcCCe--EEEcc
Q psy12817 642 PY---NLHHHVAEFCIQHGKN--LVTAS 664 (1201)
Q Consensus 642 P~---~~h~~VakacIeaGkh--~VD~S 664 (1201)
.. ......++.+++..++ +||++
T Consensus 247 sa~~~ii~~~~ve~a~~~r~~~livDia 274 (414)
T COG0373 247 SAPHPIITREMVERALKIRKRLLIVDIA 274 (414)
T ss_pred CCCccccCHHHHHHHHhcccCeEEEEec
Confidence 42 3456777888777766 67775
|
|
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.2e-06 Score=97.31 Aligned_cols=104 Identities=16% Similarity=0.230 Sum_probs=79.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++|+|||+|.+|+.++..+....+ -+|.|++|++++++++++.+. +++... + ++++++++++|+||+|
T Consensus 127 ~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~aDiVi~a 199 (325)
T PRK08618 127 AKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYV--V-----NSADEAIEEADIIVTV 199 (325)
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEE--e-----CCHHHHHhcCCEEEEc
Confidence 4789999999999999988765433 469999999999999887552 222221 2 2466777899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERA 677 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~A 677 (1201)
+|.. |+.+. .+++.|+|+..+....+.+++++...
T Consensus 200 T~s~-~p~i~-~~l~~G~hV~~iGs~~p~~~E~~~~~ 234 (325)
T PRK08618 200 TNAK-TPVFS-EKLKKGVHINAVGSFMPDMQELPSEA 234 (325)
T ss_pred cCCC-CcchH-HhcCCCcEEEecCCCCcccccCCHHH
Confidence 9965 88888 99999999998866556666665443
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.20 E-value=8.1e-06 Score=86.82 Aligned_cols=103 Identities=13% Similarity=0.167 Sum_probs=78.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.+.++++|+| +|.+|+.+++.|.+.+ .+|++++|+.++++.+++.+. +......|..+ .+.+.+.++++|+||
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g-~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~diVi 102 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREG-ARVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAIKGADVVF 102 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHHhcCCEEE
Confidence 4568999999 5999999999999864 689999999999988877542 34455667776 778888999999999
Q ss_pred EcCCCccc-HHHHHHHHHcCCeEEEccCChH
Q psy12817 639 SLLPYNLH-HHVAEFCIQHGKNLVTASYLSP 668 (1201)
Q Consensus 639 s~lP~~~h-~~VakacIeaGkh~VD~Syvs~ 668 (1201)
+++|.... ......+.+.++-++|+.|..+
T Consensus 103 ~at~~g~~~~~~~~~~~~~~~vv~D~~~~~~ 133 (194)
T cd01078 103 AAGAAGVELLEKLAWAPKPLAVAADVNAVPP 133 (194)
T ss_pred ECCCCCceechhhhcccCceeEEEEccCCCC
Confidence 99987664 2223333444677999988544
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=98.19 E-value=9.4e-06 Score=92.15 Aligned_cols=115 Identities=18% Similarity=0.229 Sum_probs=83.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.+++.|...+ .+|++++|+.+++++... . +...+ + .+.+.++++++|+||+++|
T Consensus 149 l~gk~v~IiG~G~iG~avA~~L~~~G-~~V~v~~R~~~~~~~~~~-~-g~~~~-----~--~~~l~~~l~~aDiVint~P 218 (287)
T TIGR02853 149 IHGSNVMVLGFGRTGMTIARTFSALG-ARVFVGARSSADLARITE-M-GLIPF-----P--LNKLEEKVAEIDIVINTIP 218 (287)
T ss_pred CCCCEEEEEcChHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-C-CCeee-----c--HHHHHHHhccCCEEEECCC
Confidence 34689999999999999999998875 699999999987665442 2 23221 1 3467888899999999999
Q ss_pred Ccc-cHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEecccc
Q psy12817 643 YNL-HHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGL 690 (1201)
Q Consensus 643 ~~~-h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~Gl 690 (1201)
..+ .... -..++.+.-++|++|.+-.+. + +.||+.|+..+..-|+
T Consensus 219 ~~ii~~~~-l~~~k~~aliIDlas~Pg~td-f-~~Ak~~G~~a~~~~gl 264 (287)
T TIGR02853 219 ALVLTADV-LSKLPKHAVIIDLASKPGGTD-F-EYAKKRGIKALLAPGL 264 (287)
T ss_pred hHHhCHHH-HhcCCCCeEEEEeCcCCCCCC-H-HHHHHCCCEEEEeCCC
Confidence 764 2222 234567788999988543332 3 6789999988754443
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.2e-05 Score=90.88 Aligned_cols=110 Identities=18% Similarity=0.328 Sum_probs=83.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
++||.|||+|.+|..++..|.+. +++|++.||+.++++++.+. ++.. . +...++++++|+||.|+|..
T Consensus 2 ~~~IgviG~G~mG~~~a~~l~~~-g~~v~~~d~~~~~~~~~~~~--g~~~-----~----~~~~e~~~~~d~vi~~vp~~ 69 (296)
T PRK11559 2 TMKVGFIGLGIMGKPMSKNLLKA-GYSLVVYDRNPEAVAEVIAA--GAET-----A----STAKAVAEQCDVIITMLPNS 69 (296)
T ss_pred CceEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHC--CCee-----c----CCHHHHHhcCCEEEEeCCCH
Confidence 57899999999999999999875 57899999999988876643 2321 1 23556678999999999976
Q ss_pred ccHH-HH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 645 LHHH-VA------EFCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h~~-Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.+.. +. ..+++.|+.++|.|.+++ ..+++.+.+++.|+.++.
T Consensus 70 ~~~~~v~~~~~~~~~~~~~g~iiid~st~~~~~~~~l~~~~~~~g~~~~d 119 (296)
T PRK11559 70 PHVKEVALGENGIIEGAKPGTVVIDMSSIAPLASREIAAALKAKGIEMLD 119 (296)
T ss_pred HHHHHHHcCcchHhhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 5533 21 234567889999987666 467788888888887754
|
|
| >TIGR03855 NAD_NadX aspartate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.3e-05 Score=88.45 Aligned_cols=111 Identities=23% Similarity=0.238 Sum_probs=85.1
Q ss_pred EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-cCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC----C
Q psy12817 592 ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-RSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY----L 666 (1201)
Q Consensus 592 VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy----v 666 (1201)
+.|+|++.++++.+++.+ ++.. +. .+++++ .+.|+|+.|+|...|.+++..|+++|+|+++++. .
T Consensus 5 vaV~D~~~e~a~~~a~~~-g~~~----~~-----d~~eLl~~~vDaVviatp~~~H~e~a~~aL~aGkhVl~~s~gAlad 74 (229)
T TIGR03855 5 AAVYDRNPKDAKELAERC-GAKI----VS-----DFDEFLPEDVDIVVEAASQEAVKEYAEKILKNGKDLLIMSVGALAD 74 (229)
T ss_pred EEEECCCHHHHHHHHHHh-CCce----EC-----CHHHHhcCCCCEEEECCChHHHHHHHHHHHHCCCCEEEECCcccCC
Confidence 568999999999999887 3432 11 344444 4799999999999999999999999999999986 4
Q ss_pred hHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeec
Q psy12817 667 SPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYC 720 (1201)
Q Consensus 667 s~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~c 720 (1201)
.++.++|.+.|++.|..++...|+--|+|.+-+. ..|.++++...+
T Consensus 75 ~e~~~~l~~aA~~~g~~l~i~sGai~g~d~l~a~--------~ig~~~~V~i~~ 120 (229)
T TIGR03855 75 RELRERLREVARSSGRKVYIPSGAIGGLDALKAA--------SLGRIERVVLTT 120 (229)
T ss_pred HHHHHHHHHHHHhcCCEEEEChHHHHHHHHHHhc--------ccCCceEEEEEE
Confidence 4678889999999999999887766665555332 115566665544
|
Members of this protein family are L-aspartate dehydrogenase, as shown for the NADP-dependent enzyme TM_1643 of Thermotoga maritima. Members lack homology to NadB, the aspartate oxidase (EC 1.4.3.16) of most mesophilic bacteria (described by TIGR00551), which this enzyme replaces in the generation of oxaloacetate from aspartate for the NAD biosynthetic pathway. All members of the seed alignment are found adjacent to other genes of NAD biosynthesis, although other uses of L-aspartate dehydrogenase may occur. |
| >PRK06349 homoserine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.2e-05 Score=95.92 Aligned_cols=121 Identities=24% Similarity=0.267 Sum_probs=87.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC---------CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE---------NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~---------~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
+.||+|+|+|.||+.+++.|.++. +++ +.|++|+.++++.. ..++.. +.+ ++++++.
T Consensus 3 ~i~VgiiG~G~VG~~~~~~L~~~~~~l~~~~g~~i~l~~V~~~~~~~~~~~--~~~~~~-----~~~----d~~~ll~d~ 71 (426)
T PRK06349 3 PLKVGLLGLGTVGSGVVRILEENAEEIAARAGRPIEIKKVAVRDLEKDRGV--DLPGIL-----LTT----DPEELVNDP 71 (426)
T ss_pred eEEEEEEeeCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEeCChhhccCC--CCcccc-----eeC----CHHHHhhCC
Confidence 479999999999999998886542 355 45789988765421 111111 122 3555554
Q ss_pred CCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEecc---ccCchhHH
Q psy12817 633 SADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEV---GLDPGIDH 696 (1201)
Q Consensus 633 ~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~---GlDPGIdh 696 (1201)
+.|+||.|++. ..|.++++.|+++|+|+|++. ......++|.+.|+++|+.++-+. |.-|-+..
T Consensus 72 ~iDvVve~tg~~~~~~~~~~~aL~~GkhVVtaNK~~~a~~~~eL~~lA~~~gv~l~fEasV~ggiPii~~ 141 (426)
T PRK06349 72 DIDIVVELMGGIEPARELILKALEAGKHVVTANKALLAVHGAELFAAAEEKGVDLYFEAAVAGGIPIIKA 141 (426)
T ss_pred CCCEEEECCCCchHHHHHHHHHHHCCCeEEEcCHHHHHHHHHHHHHHHHHcCCcEEEEEEeeccCchHHH
Confidence 58999999864 567899999999999999985 345567889999999999988764 44455443
|
|
| >PRK13301 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.2e-05 Score=87.91 Aligned_cols=125 Identities=22% Similarity=0.268 Sum_probs=97.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC--CCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD--ENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~--~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~ 640 (1201)
.+||.|||||.+|+.+++.|.+. .+++ +.|.+|+.+++++++.. +. +. ++++++ ..+.|+||.|
T Consensus 2 ~~rvgiIG~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~~---~~-----~~----~~l~~ll~~~~DlVVE~ 69 (267)
T PRK13301 2 THRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAGR---VA-----LL----DGLPGLLAWRPDLVVEA 69 (267)
T ss_pred ceEEEEECccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhcc---Cc-----cc----CCHHHHhhcCCCEEEEC
Confidence 37999999999999999998764 3366 45678888888887653 22 22 246665 4679999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHH-HHHHHHHHHHcCCEEEeccccCchhHHHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPE-MMALHERAASAGITVLNEVGLDPGIDHLLAME 701 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e-~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~ 701 (1201)
.+...-.+.+..++++|++++..|. ..++ -.+|.+.|++.|-.+..-.|---|+|.+.++.
T Consensus 70 A~~~av~e~~~~iL~~g~dlvv~SvGALaD~~~~~~l~~~A~~~g~~i~ipSGAigGlD~l~aa~ 134 (267)
T PRK13301 70 AGQQAIAEHAEGCLTAGLDMIICSAGALADDALRARLIAAAEAGGARIRVPAGAIAGLDYLQAVA 134 (267)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEChhHhcCHHHHHHHHHHHHhCCCEEEEeChHHHhHHHHHHhh
Confidence 9877678889999999999999984 3333 45688889999999888888878888887764
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=98.13 E-value=1e-05 Score=83.86 Aligned_cols=89 Identities=22% Similarity=0.267 Sum_probs=73.5
Q ss_pred EEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCccc
Q psy12817 568 VLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 568 VLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~h 646 (1201)
|+|+| .|++|+.+++.|.+++ ++|++..|++++++. .++++.+..|+.| .+.+.+.++++|+||++++....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~-~~V~~~~R~~~~~~~----~~~~~~~~~d~~d--~~~~~~al~~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG-HEVTALVRSPSKAED----SPGVEIIQGDLFD--PDSVKAALKGADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGHHH----CTTEEEEESCTTC--HHHHHHHHTTSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCC-CEEEEEecCchhccc----ccccccceeeehh--hhhhhhhhhhcchhhhhhhhhcc
Confidence 79999 5999999999999986 899999999998887 4589999999998 88999999999999999964332
Q ss_pred HHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCC
Q psy12817 647 HHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGI 682 (1201)
Q Consensus 647 ~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGV 682 (1201)
. .+.++.+.+.++++|+
T Consensus 74 ~-------------------~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 74 D-------------------VDAAKNIIEAAKKAGV 90 (183)
T ss_dssp H-------------------HHHHHHHHHHHHHTTS
T ss_pred c-------------------cccccccccccccccc
Confidence 0 3445556666666666
|
... |
| >TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.2e-05 Score=91.23 Aligned_cols=91 Identities=20% Similarity=0.323 Sum_probs=70.6
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHH-HHHHHcCCeeEEEeecCCCCchHHHhhc--cCCcEEEEcC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDID-KVTNEFGRVEATLIDVNNGGSDNLSGLV--RSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe-~La~~~~~v~~v~lDV~D~~~e~L~elI--~~~DVVIs~l 641 (1201)
.||+|||+|.+|+.++..+.+.+++++ .++|+++++.. +.++.+ ++.... +.+++++ .+.|+|+.|+
T Consensus 2 lrVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~-Gi~~~~--------~~~e~ll~~~dIDaV~iaT 72 (285)
T TIGR03215 2 VKVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARAREL-GVKTSA--------EGVDGLLANPDIDIVFDAT 72 (285)
T ss_pred cEEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHC-CCCEEE--------CCHHHHhcCCCCCEEEECC
Confidence 689999999999999888877777884 57898887543 456655 444322 1233333 3689999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
|...|.+.+..|+++|+|++|++.
T Consensus 73 p~~~H~e~a~~al~aGk~VIdekP 96 (285)
T TIGR03215 73 SAKAHARHARLLAELGKIVIDLTP 96 (285)
T ss_pred CcHHHHHHHHHHHHcCCEEEECCc
Confidence 999999999999999999999963
|
Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc. |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.2e-05 Score=98.40 Aligned_cols=134 Identities=12% Similarity=0.234 Sum_probs=97.8
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~l 641 (1201)
.+.++++|+|+|.+|++++..|++.+ .+|++++|+.++++.+++.++ ... ++.. .+.+. ..++|+|||++
T Consensus 377 ~~~k~vlIlGaGGagrAia~~L~~~G-~~V~i~nR~~e~a~~la~~l~-~~~--~~~~-----~~~~~~~~~~diiINtT 447 (529)
T PLN02520 377 LAGKLFVVIGAGGAGKALAYGAKEKG-ARVVIANRTYERAKELADAVG-GQA--LTLA-----DLENFHPEEGMILANTT 447 (529)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhC-Cce--eeHh-----HhhhhccccCeEEEecc
Confidence 34589999999999999999999875 499999999999999988763 222 2222 22222 23589999999
Q ss_pred CCcccH-----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEE
Q psy12817 642 PYNLHH-----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESF 716 (1201)
Q Consensus 642 P~~~h~-----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf 716 (1201)
|..+++ ++-...++.+.-++|+.|.+.+ ..|.++|+++|+.++++.+ |+..+.+.+ |
T Consensus 448 ~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~~-T~ll~~A~~~G~~~~~Gl~-------MLv~Qa~~~----------f 509 (529)
T PLN02520 448 SVGMQPNVDETPISKHALKHYSLVFDAVYTPKI-TRLLREAEESGAIIVSGTE-------MFIRQAYEQ----------F 509 (529)
T ss_pred cCCCCCCCCCCcccHhhCCCCCEEEEeccCCCc-CHHHHHHHHCCCeEeCcHH-------HHHHHHHHH----------H
Confidence 877643 2444556777789999998765 4455889999999988655 566665544 4
Q ss_pred EeecCCC
Q psy12817 717 VSYCGGL 723 (1201)
Q Consensus 717 ~s~cGGL 723 (1201)
+.|+|.-
T Consensus 510 ~lwtg~~ 516 (529)
T PLN02520 510 ERFTGLP 516 (529)
T ss_pred HHHhCCC
Confidence 5788753
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=7.4e-06 Score=97.37 Aligned_cols=109 Identities=21% Similarity=0.293 Sum_probs=79.7
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+...++|+|+|+|.+|+.++.+|...+-.+|+|++|+.++++.++..+++..++ . .+.+.+.+.++|+||||+
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~-----~--~~~l~~~l~~aDiVI~aT 250 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAH-----Y--LSELPQLIKKADIIIAAV 250 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEe-----c--HHHHHHHhccCCEEEECc
Confidence 456789999999999999999999876568999999999999999988433322 1 356788899999999999
Q ss_pred CCc---ccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 642 PYN---LHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 642 P~~---~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
+.. +.....+ ....-++|++- +.|.+.+| .|+.+++
T Consensus 251 ~a~~~vi~~~~~~---~~~~~~iDLavPRdidp~v~~l------~~v~l~~ 292 (414)
T PRK13940 251 NVLEYIVTCKYVG---DKPRVFIDISIPQALDPKLGEL------EQNVYYC 292 (414)
T ss_pred CCCCeeECHHHhC---CCCeEEEEeCCCCCCCccccCc------CCeEEEe
Confidence 542 2222211 12235788863 55555555 6777776
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00046 Score=86.83 Aligned_cols=92 Identities=10% Similarity=0.120 Sum_probs=62.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-CCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-SADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-~~DVVIs~l 641 (1201)
.+++||+|||+|.||+.++..|.+. +.+|++++|+... +. +..+ ++.. .. .+.+++. ++|+||.|+
T Consensus 367 ~~~~kIgIIGlG~mG~slA~~L~~~-G~~V~~~dr~~~~-~~-a~~~-Gv~~----~~-----~~~el~~~~aDvVILav 433 (667)
T PLN02712 367 GSKLKIAIVGFGNFGQFLAKTMVKQ-GHTVLAYSRSDYS-DE-AQKL-GVSY----FS-----DADDLCEEHPEVILLCT 433 (667)
T ss_pred CCCCEEEEEecCHHHHHHHHHHHHC-cCEEEEEECChHH-HH-HHHc-CCeE----eC-----CHHHHHhcCCCEEEECC
Confidence 4678999999999999999999875 4789999998643 22 3333 3321 12 2444444 589999999
Q ss_pred CCcccHHHHHHH----HHcCCeEEEccCCh
Q psy12817 642 PYNLHHHVAEFC----IQHGKNLVTASYLS 667 (1201)
Q Consensus 642 P~~~h~~Vakac----IeaGkh~VD~Syvs 667 (1201)
|......+++.. ++.|+-++|.+-+.
T Consensus 434 P~~~~~~vi~~l~~~~lk~g~ivvDv~SvK 463 (667)
T PLN02712 434 SILSTEKVLKSLPFQRLKRSTLFVDVLSVK 463 (667)
T ss_pred ChHHHHHHHHHHHHhcCCCCcEEEECCCcc
Confidence 976555555433 33466788875543
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.2e-05 Score=87.98 Aligned_cols=72 Identities=10% Similarity=0.137 Sum_probs=62.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|||+|+| +|++|+.+++.|.+. +++|++.+|+.+++..+.. .+++.+..|+.| ++.+.++++++|+||++.+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~l~~--~~v~~v~~Dl~d--~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKASFLKE--WGAELVYGDLSL--PETLPPSFKGVTAIIDAST 73 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhhhHhh--cCCEEEECCCCC--HHHHHHHHCCCCEEEECCC
Confidence 5899999 699999999999987 5899999999877655442 368899999998 8899999999999999875
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.02 E-value=3.7e-05 Score=88.15 Aligned_cols=110 Identities=23% Similarity=0.325 Sum_probs=80.3
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.||+.++.+|...+..+|++++|+.+++++++..++ ...+ + .+.+.+.+.++|+||+|+|
T Consensus 176 l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g-~~~~-----~--~~~~~~~l~~aDvVi~at~ 247 (311)
T cd05213 176 LKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG-GNAV-----P--LDELLELLNEADVVISATG 247 (311)
T ss_pred ccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC-CeEE-----e--HHHHHHHHhcCCEEEECCC
Confidence 456899999999999999999988666689999999999999998884 3221 2 3457777889999999998
Q ss_pred CcccHHHHHHHHHc----CCeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 643 YNLHHHVAEFCIQH----GKNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~~h~~VakacIea----Gkh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
......+.+..++. ++-++|++. +.++..++ .|+.+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~viDlavPrdi~~~v~~l------~~v~l~~ 292 (311)
T cd05213 248 APHYAKIVERAMKKRSGKPRLIVDLAVPRDIEPEVGEL------EGVRLYT 292 (311)
T ss_pred CCchHHHHHHHHhhCCCCCeEEEEeCCCCCCchhhccC------CCcEEEE
Confidence 65544544544433 445888873 44444433 5666665
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=98.02 E-value=9.9e-06 Score=94.23 Aligned_cols=96 Identities=21% Similarity=0.281 Sum_probs=71.0
Q ss_pred CeEEEEcC-chhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEE-EeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLGA-GYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEAT-LIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILGA-G~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v-~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+||+|+|+ |++|+.+++.|.+++.++++ ++++..+..+.+...++..... ..++.+ .+..++++++|+|+.|+|
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~DvVf~alP 77 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEP---IDEEEIAEDADVVFLALP 77 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeec---CCHHHhhcCCCEEEECCC
Confidence 58999996 99999999999999989977 5565544444455445433221 112221 123444468999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEcc
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S 664 (1201)
...|.+++..++++|+++||.|
T Consensus 78 ~~~s~~~~~~~~~~G~~VIDlS 99 (346)
T TIGR01850 78 HGVSAELAPELLAAGVKVIDLS 99 (346)
T ss_pred chHHHHHHHHHHhCCCEEEeCC
Confidence 9999999999999999999997
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.4e-05 Score=93.42 Aligned_cols=126 Identities=14% Similarity=0.213 Sum_probs=92.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.++++|+|+|.+|++++..|.+.+ .+|++++|+.++++++++.+. ... .+. +.+.+ +.++|+||||+|.
T Consensus 331 ~~k~vlIiGaGgiG~aia~~L~~~G-~~V~i~~R~~~~~~~la~~~~-~~~--~~~-----~~~~~-l~~~DiVInatP~ 400 (477)
T PRK09310 331 NNQHVAIVGAGGAAKAIATTLARAG-AELLIFNRTKAHAEALASRCQ-GKA--FPL-----ESLPE-LHRIDIIINCLPP 400 (477)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhc-cce--ech-----hHhcc-cCCCCEEEEcCCC
Confidence 4579999999999999999999875 599999999999998887652 211 122 22222 4689999999998
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCC
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGG 722 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGG 722 (1201)
.+..+ ..+. .-++|+.|.+.... +.+.|+++|+.++++.+ |+..+.+.+. +.|+|.
T Consensus 401 g~~~~---~~l~--~~v~D~~Y~P~~T~-ll~~A~~~G~~~~~G~~-------Ml~~Qa~~~f----------~lw~g~ 456 (477)
T PRK09310 401 SVTIP---KAFP--PCVVDINTLPKHSP-YTQYARSQGSSIIYGYE-------MFAEQALLQF----------RLWFPT 456 (477)
T ss_pred CCcch---hHHh--hhEEeccCCCCCCH-HHHHHHHCcCEEECcHH-------HHHHHHHHHH----------HHHcCC
Confidence 76422 1222 36999999876655 66899999999998665 5666555444 567775
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.8e-06 Score=83.88 Aligned_cols=111 Identities=21% Similarity=0.314 Sum_probs=72.7
Q ss_pred CeEEEEcC-chhHHHHHHHHHhCCCCe-EEEEeCCHH-HH-HHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 566 RNVLLLGA-GYVSRPLIEYLHRDENIH-ITLGSLLKE-DI-DKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGA-G~VG~~va~~La~~~~~~-VtVadR~~e-kA-e~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+||+|+|+ |+||+.+++.+.+.++++ +.+++|..+ .. +.+. .+.+....-.-+ .+++++++.++|+||+.+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g-~~~~~~~~~~~v----~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVG-ELAGIGPLGVPV----TDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCH-HHCTSST-SSBE----BS-HHHHTTH-SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhh-hhhCcCCccccc----chhHHHhcccCCEEEEcC
Confidence 58999998 999999999999988998 456777762 11 1111 111111101111 246788888899999998
Q ss_pred CCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcC
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAG 681 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAG 681 (1201)
-+..-...++.|+++|+++|.-+ |..++++.|.+.+++.+
T Consensus 76 ~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~~~ 117 (124)
T PF01113_consen 76 NPDAVYDNLEYALKHGVPLVIGTTGFSDEQIDELEELAKKIP 117 (124)
T ss_dssp -HHHHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHHHTTTSE
T ss_pred ChHHhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHHhccCC
Confidence 43444678899999999988743 55567777877777633
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK08300 acetaldehyde dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.5e-05 Score=89.06 Aligned_cols=93 Identities=16% Similarity=0.221 Sum_probs=72.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHH-HHHHHHHcCCeeEEEeecCCCCchHHHhhc-----cCCcE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKED-IDKVTNEFGRVEATLIDVNNGGSDNLSGLV-----RSADL 636 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ek-Ae~La~~~~~v~~v~lDV~D~~~e~L~elI-----~~~DV 636 (1201)
++.||+|||+|.+|+.++..+.+.+++++ .++|++++. ..+.++++ ++.... +.+++++ .+.|+
T Consensus 3 ~klrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~-Gi~~~~--------~~ie~LL~~~~~~dIDi 73 (302)
T PRK08300 3 SKLKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRL-GVATSA--------EGIDGLLAMPEFDDIDI 73 (302)
T ss_pred CCCeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHc-CCCccc--------CCHHHHHhCcCCCCCCE
Confidence 35799999999999998888887778884 578998874 33556665 443221 1233343 46999
Q ss_pred EEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 637 VVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 637 VIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
|+.++|...|.+.+..|+++|+|++|.+.
T Consensus 74 Vf~AT~a~~H~e~a~~a~eaGk~VID~sP 102 (302)
T PRK08300 74 VFDATSAGAHVRHAAKLREAGIRAIDLTP 102 (302)
T ss_pred EEECCCHHHHHHHHHHHHHcCCeEEECCc
Confidence 99999999999999999999999999973
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.6e-05 Score=78.79 Aligned_cols=93 Identities=20% Similarity=0.328 Sum_probs=68.8
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
||+|+| +|++|+.+++.|.+++.++ +.+++++.+.-+.+...++ +..-..+.-.+ .+ .++++|+|+.|+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD--PE----ELSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS--GH----HHTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc--hh----HhhcCCEEEecC
Confidence 799999 8999999999999999998 4566766644455555443 22222221122 22 237899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
|...+.+++..+++.|+.+||.|.
T Consensus 75 ~~~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 75 PHGASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp CHHHHHHHHHHHHHTTSEEEESSS
T ss_pred chhHHHHHHHHHhhCCcEEEeCCH
Confidence 999999999999999999999973
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >KOG0409|consensus | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.1e-05 Score=86.31 Aligned_cols=113 Identities=16% Similarity=0.289 Sum_probs=87.5
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+.++++|..||.|.||..++.+|.+. +++|+|.||+.++.+.+++. +++ +.+ .-.++.+++|+||.|+
T Consensus 32 ~~s~~~iGFIGLG~MG~~M~~nLik~-G~kVtV~dr~~~k~~~f~~~--Ga~-----v~~----sPaeVae~sDvvitmv 99 (327)
T KOG0409|consen 32 TPSKTRIGFIGLGNMGSAMVSNLIKA-GYKVTVYDRTKDKCKEFQEA--GAR-----VAN----SPAEVAEDSDVVITMV 99 (327)
T ss_pred CcccceeeEEeeccchHHHHHHHHHc-CCEEEEEeCcHHHHHHHHHh--chh-----hhC----CHHHHHhhcCEEEEEc
Confidence 44689999999999999999999986 68999999999999999875 333 222 3345566899999999
Q ss_pred CCcccHHH-------HHHHHHcCCeE-EEccCChHH-HHHHHHHHHHcCCEEEe
Q psy12817 642 PYNLHHHV-------AEFCIQHGKNL-VTASYLSPE-MMALHERAASAGITVLN 686 (1201)
Q Consensus 642 P~~~h~~V-------akacIeaGkh~-VD~Syvs~e-~~eLde~AkeAGVtil~ 686 (1201)
|..-|..- +-..++.|..+ ||.|.++|. .+++.++++..|..++.
T Consensus 100 ~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vD 153 (327)
T KOG0409|consen 100 PNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVD 153 (327)
T ss_pred CChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEe
Confidence 98765331 12334566666 899987776 47899999999888875
|
|
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.7e-05 Score=91.03 Aligned_cols=115 Identities=16% Similarity=0.206 Sum_probs=85.4
Q ss_pred CCCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcCC--eeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFGR--VEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~~--v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..++|+|||+|.+|+.++..+.. .+..+|+|.+|++++++++++++.. .... +. +...+.++++|+|++|
T Consensus 124 ~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~---~~----~~~~~av~~aDIVi~a 196 (314)
T PRK06141 124 DASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAE---VV----TDLEAAVRQADIISCA 196 (314)
T ss_pred CCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceE---Ee----CCHHHHHhcCCEEEEe
Confidence 35799999999999999987765 4556799999999999999987631 1111 11 2456677899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEe
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~ 686 (1201)
+|.. ++-+-...++.|+|+.......+.+++++.+..+.+..++.
T Consensus 197 T~s~-~pvl~~~~l~~g~~i~~ig~~~~~~~El~~~~~~~a~~~vD 241 (314)
T PRK06141 197 TLST-EPLVRGEWLKPGTHLDLVGNFTPDMRECDDEAIRRASVYVD 241 (314)
T ss_pred eCCC-CCEecHHHcCCCCEEEeeCCCCcccccCCHHHHhcCcEEEc
Confidence 9865 33333467899997666665677888888877777766654
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.3e-05 Score=87.17 Aligned_cols=115 Identities=19% Similarity=0.241 Sum_probs=81.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
..+||+|||+|.+|+.++..|.+.+ .+|++++|+.++.+.. ..+ +.+++ + .+.+.+.++++|+||+++|.
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~G-a~V~v~~r~~~~~~~~-~~~-G~~~~-----~--~~~l~~~l~~aDiVI~t~p~ 220 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALG-ANVTVGARKSAHLARI-TEM-GLSPF-----H--LSELAEEVGKIDIIFNTIPA 220 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHH-HHc-CCeee-----c--HHHHHHHhCCCCEEEECCCh
Confidence 4589999999999999999998874 6999999998775543 333 34332 1 34678888999999999986
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEecccc
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGL 690 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~Gl 690 (1201)
.+-..-.-..++.+.-++|++|..-.. ++ +.|++.|++++.-.|+
T Consensus 221 ~~i~~~~l~~~~~g~vIIDla~~pggt-d~-~~a~~~Gv~~~~~~~l 265 (296)
T PRK08306 221 LVLTKEVLSKMPPEALIIDLASKPGGT-DF-EYAEKRGIKALLAPGL 265 (296)
T ss_pred hhhhHHHHHcCCCCcEEEEEccCCCCc-Ce-eehhhCCeEEEEECCC
Confidence 432222233456788899998744322 23 5688899988744443
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.2e-05 Score=83.76 Aligned_cols=91 Identities=14% Similarity=0.211 Sum_probs=71.6
Q ss_pred EEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH--HHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 568 VLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED--IDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 568 VLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek--Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|+|+| +|.+|+.+++.|.+ .+++|++..|+..+ ++++.. .+++.+..|..| .+.|.++++++|+|++++|..
T Consensus 1 I~V~GatG~~G~~v~~~L~~-~~~~V~~l~R~~~~~~~~~l~~--~g~~vv~~d~~~--~~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLS-AGFSVRALVRDPSSDRAQQLQA--LGAEVVEADYDD--PESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTGCEEEEESSSHHHHHHHHHH--TTTEEEES-TT---HHHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHh-CCCCcEEEEeccchhhhhhhhc--ccceEeecccCC--HHHHHHHHcCCceEEeecCcc
Confidence 79999 69999999999999 57899999998743 455443 368889999988 899999999999999999843
Q ss_pred ------ccHHHHHHHHHcCCeEEEc
Q psy12817 645 ------LHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 645 ------~h~~VakacIeaGkh~VD~ 663 (1201)
.+..++++|.++|+..+-.
T Consensus 76 ~~~~~~~~~~li~Aa~~agVk~~v~ 100 (233)
T PF05368_consen 76 HPSELEQQKNLIDAAKAAGVKHFVP 100 (233)
T ss_dssp CCCHHHHHHHHHHHHHHHT-SEEEE
T ss_pred hhhhhhhhhhHHHhhhccccceEEE
Confidence 2466788888888765544
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.9e-05 Score=86.44 Aligned_cols=110 Identities=13% Similarity=0.255 Sum_probs=82.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|+||.|||+|.||.+++..|++. +++|++.||++++++++.+. ++. . .....++++++|+||.|+|..
T Consensus 1 m~~Ig~IGlG~mG~~mA~~l~~~-G~~V~v~d~~~~~~~~~~~~--g~~-----~----~~s~~~~~~~aDvVi~~vp~~ 68 (296)
T PRK15461 1 MAAIAFIGLGQMGSPMASNLLKQ-GHQLQVFDVNPQAVDALVDK--GAT-----P----AASPAQAAAGAEFVITMLPNG 68 (296)
T ss_pred CCeEEEEeeCHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHc--CCc-----c----cCCHHHHHhcCCEEEEecCCH
Confidence 56899999999999999999986 47899999999999887753 222 1 123456778999999999976
Q ss_pred cc-HHHH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 645 LH-HHVA------EFCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h-~~Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.. ..+. ..+++.|+-++|.|-+++ ..+++.+..++.|+.++.
T Consensus 69 ~~~~~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ld 118 (296)
T PRK15461 69 DLVRSVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMD 118 (296)
T ss_pred HHHHHHHcCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 42 2222 123456778999987555 567888889999988763
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.90 E-value=5.3e-05 Score=92.42 Aligned_cols=113 Identities=21% Similarity=0.241 Sum_probs=83.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||+|.||+.++.+|...+..+|+|++|+.++++.++..++++.....+ .+++.+.+.++|+||+|+|
T Consensus 264 l~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~-----~~dl~~al~~aDVVIsAT~ 338 (519)
T PLN00203 264 HASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKP-----LDEMLACAAEADVVFTSTS 338 (519)
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeec-----HhhHHHHHhcCCEEEEccC
Confidence 45789999999999999999999875457999999999999999887543322222 3456777889999999985
Q ss_pred C---cccHHHHHHHHHc----C--CeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 643 Y---NLHHHVAEFCIQH----G--KNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~---~~h~~VakacIea----G--kh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
. .+..+.++.+.+. + .-+||++. +.+.+.+| .|+.+++
T Consensus 339 s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdIdp~v~~l------~~v~lyd 388 (519)
T PLN00203 339 SETPLFLKEHVEALPPASDTVGGKRLFVDISVPRNVGACVSEL------ESARVYN 388 (519)
T ss_pred CCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCCCccccccC------CCCeEEE
Confidence 3 3456666665432 1 35889874 56666555 4777776
|
|
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=5e-05 Score=88.34 Aligned_cols=96 Identities=17% Similarity=0.197 Sum_probs=73.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeE-------------EEeecCCCCchHHHhh
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEA-------------TLIDVNNGGSDNLSGL 630 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~-------------v~lDV~D~~~e~L~el 630 (1201)
|.||+|+|+|+||+.+++.+.+++++++ .+++++++.+..++..++ ... ..+.+.+ .+.++
T Consensus 1 ~ikVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G-~~~~~~~~~~~~~~~~~~i~V~~----~~~el 75 (341)
T PRK04207 1 MIKVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKG-YPLYVADPEREKAFEEAGIPVAG----TIEDL 75 (341)
T ss_pred CeEEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcC-CCccccCccccccccCCceEEcC----ChhHh
Confidence 6799999999999999999998888985 467777766666665331 100 0112222 34556
Q ss_pred ccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 631 VRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 631 I~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+.++|+|+.|+|...|.+.++.|+++|+.+|+.+.
T Consensus 76 ~~~vDVVIdaT~~~~~~e~a~~~~~aGk~VI~~~~ 110 (341)
T PRK04207 76 LEKADIVVDATPGGVGAKNKELYEKAGVKAIFQGG 110 (341)
T ss_pred hccCCEEEECCCchhhHHHHHHHHHCCCEEEEcCC
Confidence 67899999999999999999999999999999754
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=97.90 E-value=5.6e-05 Score=85.37 Aligned_cols=108 Identities=21% Similarity=0.335 Sum_probs=80.5
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCccc
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~h 646 (1201)
||.|||+|.||..++..|++. +++|++.||++++++++... +... .+...++++++|+||.|+|...+
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~-G~~V~~~dr~~~~~~~~~~~--g~~~---------~~~~~~~~~~aDivi~~vp~~~~ 68 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKA-GYQLHVTTIGPEVADELLAA--GAVT---------AETARQVTEQADVIFTMVPDSPQ 68 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHC--CCcc---------cCCHHHHHhcCCEEEEecCCHHH
Confidence 589999999999999999986 57999999999998887653 2211 12355677899999999997543
Q ss_pred HH-HH---H---HHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 647 HH-VA---E---FCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 647 ~~-Va---k---acIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.. ++ . ..+..|+.++|.|..++ ..+++.+.+++.|+.++.
T Consensus 69 ~~~v~~~~~~~~~~~~~g~iivd~st~~~~~~~~l~~~l~~~g~~~~~ 116 (291)
T TIGR01505 69 VEEVAFGENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGIDYLD 116 (291)
T ss_pred HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEe
Confidence 22 22 1 12356788999887555 557788888888988775
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00014 Score=82.81 Aligned_cols=118 Identities=14% Similarity=0.217 Sum_probs=84.4
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc-
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN- 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~- 644 (1201)
+||+|||+|.||.++++.|.+. +++|++.||++++++++.+. ++.. ..+ .+++.+...++|+|+.|+|..
T Consensus 1 m~Ig~IGlG~MG~~mA~~L~~~-g~~v~v~dr~~~~~~~~~~~--g~~~----~~~--~~e~~~~~~~~dvvi~~v~~~~ 71 (301)
T PRK09599 1 MQLGMIGLGRMGGNMARRLLRG-GHEVVGYDRNPEAVEALAEE--GATG----ADS--LEELVAKLPAPRVVWLMVPAGE 71 (301)
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHC--CCee----cCC--HHHHHhhcCCCCEEEEEecCCc
Confidence 4899999999999999999986 57899999999999887652 3332 112 333333333479999999875
Q ss_pred ccHHHHHH---HHHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 645 LHHHVAEF---CIQHGKNLVTASYLS-PEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 645 ~h~~Vaka---cIeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
....+... .++.|.-+||.+-.+ +..+++.+.+++.|+.++. +.+.-|
T Consensus 72 ~~~~v~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~d-apvsG~ 123 (301)
T PRK09599 72 ITDATIDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVD-VGTSGG 123 (301)
T ss_pred HHHHHHHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEe-CCCCcC
Confidence 33444433 345677799997644 4677788999999999874 554434
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.87 E-value=9.8e-05 Score=84.09 Aligned_cols=109 Identities=18% Similarity=0.249 Sum_probs=80.3
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC---CcEEEEcCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS---ADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~---~DVVIs~lP 642 (1201)
++|.+||+|.||.++++.|.+. +++|++.||+.++++++.+ . ++.. .+ ..++++++ +|+|+.|+|
T Consensus 1 m~Ig~IGlG~mG~~mA~~L~~~-g~~v~v~dr~~~~~~~~~~-~-g~~~-----~~----s~~~~~~~~~~advVi~~vp 68 (299)
T PRK12490 1 MKLGLIGLGKMGGNMAERLRED-GHEVVGYDVNQEAVDVAGK-L-GITA-----RH----SLEELVSKLEAPRTIWVMVP 68 (299)
T ss_pred CEEEEEcccHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH-C-CCee-----cC----CHHHHHHhCCCCCEEEEEec
Confidence 4799999999999999999886 5789999999999888754 2 3321 12 23444443 799999999
Q ss_pred Cc-ccHHHHHHH---HHcCCeEEEccCC-hHHHHHHHHHHHHcCCEEEe
Q psy12817 643 YN-LHHHVAEFC---IQHGKNLVTASYL-SPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~-~h~~Vakac---IeaGkh~VD~Syv-s~e~~eLde~AkeAGVtil~ 686 (1201)
.. ....+.... ++.|.-+||.|-+ +...+++.+.+++.|+.++.
T Consensus 69 ~~~~~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vd 117 (299)
T PRK12490 69 AGEVTESVIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVD 117 (299)
T ss_pred CchHHHHHHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEe
Confidence 76 334444433 4567789999765 44778888889999988753
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00011 Score=83.75 Aligned_cols=118 Identities=16% Similarity=0.238 Sum_probs=87.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
|+|.|||+|.||..++..|.+. +++|++.||+.++++++.+. ++.. ..+ .+++.+.++++|+|+.|+|...
T Consensus 1 M~Ig~IGlG~mG~~la~~L~~~-g~~V~~~dr~~~~~~~l~~~--g~~~----~~s--~~~~~~~~~~~dvIi~~vp~~~ 71 (298)
T TIGR00872 1 MQLGLIGLGRMGANIVRRLAKR-GHDCVGYDHDQDAVKAMKED--RTTG----VAN--LRELSQRLSAPRVVWVMVPHGI 71 (298)
T ss_pred CEEEEEcchHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHc--CCcc----cCC--HHHHHhhcCCCCEEEEEcCchH
Confidence 4899999999999999999886 58899999999999988763 2221 123 4556666678999999999875
Q ss_pred cHHHHHHH---HHcCCeEEEccCC-hHHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 646 HHHVAEFC---IQHGKNLVTASYL-SPEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 646 h~~Vakac---IeaGkh~VD~Syv-s~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
...+++.. ++.|.-++|.+-. .....++.+.+++.|+.++. +++.-|
T Consensus 72 ~~~v~~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vd-a~vsGg 122 (298)
T TIGR00872 72 VDAVLEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLD-CGTSGG 122 (298)
T ss_pred HHHHHHHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEe-cCCCCC
Confidence 55555433 4667789998653 35667777788889988754 555444
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.86 E-value=9.6e-05 Score=89.68 Aligned_cols=126 Identities=11% Similarity=0.117 Sum_probs=90.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-C-CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-G-RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~-~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..+.+|.+||.|.||++++..|++. +++|+|.||+.++++++.+.. . ++.. +.+.+ +.+++.+.++++|+||.|
T Consensus 4 ~~~~~IG~IGLG~MG~~mA~nL~~~-G~~V~V~NRt~~k~~~l~~~~~~~Ga~~--~~~a~-s~~e~v~~l~~~dvIi~~ 79 (493)
T PLN02350 4 AALSRIGLAGLAVMGQNLALNIAEK-GFPISVYNRTTSKVDETVERAKKEGNLP--LYGFK-DPEDFVLSIQKPRSVIIL 79 (493)
T ss_pred CCCCCEEEEeeHHHHHHHHHHHHhC-CCeEEEECCCHHHHHHHHHhhhhcCCcc--cccCC-CHHHHHhcCCCCCEEEEE
Confidence 4567899999999999999999986 689999999999999887632 1 2211 11122 133444444469999999
Q ss_pred CCCccc-HHHH---HHHHHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 641 LPYNLH-HHVA---EFCIQHGKNLVTASYLS-PEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 641 lP~~~h-~~Va---kacIeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
+|..-. ..|. ..+++.|.-+||.+-+. +..+++.++++++|+.++ ++++.-|
T Consensus 80 v~~~~aV~~Vi~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fl-dapVSGG 136 (493)
T PLN02350 80 VKAGAPVDQTIKALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYL-GMGVSGG 136 (493)
T ss_pred CCCcHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE-eCCCcCC
Confidence 987543 2232 34457788999998764 577888899999999966 5665544
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=8.4e-05 Score=85.39 Aligned_cols=76 Identities=16% Similarity=0.299 Sum_probs=60.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
||+|+|.| +|++|+.+++.|.+.++++|+..+|+.++...+... ++++++..|+.+ +.+.+.++++++|+||+|..
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~-~~~~~~~~Dl~~-~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNH-PRMHFFEGDITI-NKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccC-CCeEEEeCCCCC-CHHHHHHHHcCCCEEEECcc
Confidence 67999999 599999999999876668899999987655444322 358888999973 26678888899999999864
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00043 Score=76.15 Aligned_cols=111 Identities=21% Similarity=0.303 Sum_probs=85.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH-HcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTN-EFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~-~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~ 643 (1201)
|+++|+|+|.+|+.+|+.|.+. +..|++.+++.+++++..+ .+ .+..+..|.+| .+.|.++ +.++|+||-++..
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~-g~~Vv~Id~d~~~~~~~~~~~~-~~~~v~gd~t~--~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEE-GHNVVLIDRDEERVEEFLADEL-DTHVVIGDATD--EDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhC-CCceEEEEcCHHHHHHHhhhhc-ceEEEEecCCC--HHHHHhcCCCcCCEEEEeeCC
Confidence 6899999999999999999987 4689999999999988554 44 68889999998 8899888 8899999999986
Q ss_pred c-ccHHHHHHHHH-cCCeEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 644 N-LHHHVAEFCIQ-HGKNLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 644 ~-~h~~VakacIe-aGkh~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
. .+.-++..+.+ .|++.+.+.-.++...+. .++.|+.
T Consensus 77 d~~N~i~~~la~~~~gv~~viar~~~~~~~~~---~~~~g~~ 115 (225)
T COG0569 77 DEVNSVLALLALKEFGVPRVIARARNPEHEKV---LEKLGAD 115 (225)
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEecCHHHHHH---HHHcCCc
Confidence 3 34445555555 788888876544433332 4556743
|
|
| >COG4091 Predicted homoserine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00031 Score=80.43 Aligned_cols=156 Identities=21% Similarity=0.286 Sum_probs=109.7
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHc--CCeeEEEe---------------ecCCCC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEF--GRVEATLI---------------DVNNGG 623 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~--~~v~~v~l---------------DV~D~~ 623 (1201)
..+..||.+||+|.+|+-++....+-++.+ +.+.+|+...+++..... +..+++.. -++|
T Consensus 14 ~G~PiRVGlIGAG~mG~~ivtQi~~m~Gm~vvaisd~~~~~ak~A~~~ag~~~~~~~e~~~~s~~a~Ai~aGKi~vT~-- 91 (438)
T COG4091 14 EGKPIRVGLIGAGEMGTGIVTQIASMPGMEVVAISDRNLDAAKRAYDRAGGPKIEAVEADDASKMADAIEAGKIAVTD-- 91 (438)
T ss_pred cCCceEEEEecccccchHHHHHHhhcCCceEEEEecccchHHHHHHHHhcCCcccccccchhhHHHHHHhcCcEEEec--
Confidence 356789999999999999999999989998 567899999887765432 22222211 1222
Q ss_pred chHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEccC-----ChHHHHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 624 SDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTASY-----LSPEMMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 624 ~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~Sy-----vs~e~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
...+--.....|+||.++.. .....++-.+|.+|||+|-... +-|-++ +.|.++|++.-.+.|=.|+
T Consensus 92 D~~~i~~~~~IdvIIdATG~p~vGA~~~l~Ai~h~KHlVMmNVEaDvtIGp~Lk---~~Ad~~GviyS~~~GDeP~---- 164 (438)
T COG4091 92 DAELIIANDLIDVIIDATGVPEVGAKIALEAILHGKHLVMMNVEADVTIGPILK---QQADAAGVIYSGGAGDEPS---- 164 (438)
T ss_pred chhhhhcCCcceEEEEcCCCcchhhHhHHHHHhcCCeEEEEEeeeceeecHHHH---HHHhhcCeEEeccCCCCcH----
Confidence 11111112357999999953 4678899999999999987643 444444 5589999999888898898
Q ss_pred HHHHHHHHhhhcCCcEEEEEeecCCCCCCCCCCCcccc
Q psy12817 698 LAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRY 735 (1201)
Q Consensus 698 lA~~~idei~~~ggkV~sf~s~cGGLPaPe~~~nPL~Y 735 (1201)
..|++++=....|-+|.+ || ..-|||++|
T Consensus 165 ~~mEL~efa~a~G~evv~----aG-----KGkNnpl~~ 193 (438)
T COG4091 165 SCMELYEFASALGFEVVS----AG-----KGKNNPLNI 193 (438)
T ss_pred HHHHHHHHHHhcCCeEEe----cc-----CCcCCCCcc
Confidence 457777777777766554 44 224788876
|
|
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.5e-05 Score=88.96 Aligned_cols=106 Identities=12% Similarity=0.168 Sum_probs=79.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++++|||+|.+|+.+++.|....+ -+|+|.+|+.++++++++.+. +++. .. .+++++.++++|+||+|
T Consensus 129 ~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v---~~----~~~~~~av~~aDiVvta 201 (326)
T TIGR02992 129 SSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDV---TA----ATDPRAAMSGADIIVTT 201 (326)
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceE---EE----eCCHHHHhccCCEEEEe
Confidence 4799999999999999999975334 469999999999999988652 2222 11 23577788899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAA 678 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~Ak 678 (1201)
+|.. .+-+-...++.|.|+.......+.+++++...-
T Consensus 202 T~s~-~p~i~~~~l~~g~~i~~vg~~~p~~rEld~~~l 238 (326)
T TIGR02992 202 TPSE-TPILHAEWLEPGQHVTAMGSDAEHKNEIDPAVI 238 (326)
T ss_pred cCCC-CcEecHHHcCCCcEEEeeCCCCCCceecCHHHH
Confidence 9863 233334678999999988655667777766543
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.4e-05 Score=88.31 Aligned_cols=108 Identities=16% Similarity=0.186 Sum_probs=80.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.++|+|||+|.+|+.+++.+.. .+..+|.|.+|++++++++++++.... ..+.+. +.++++.++|+||+|+|.
T Consensus 125 ~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~-~~~~~~-----~~~~av~~aDiVitaT~s 198 (304)
T PRK07340 125 PGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALG-PTAEPL-----DGEAIPEAVDLVVTATTS 198 (304)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC-CeeEEC-----CHHHHhhcCCEEEEccCC
Confidence 4799999999999999999975 444579999999999999998773211 111122 356677899999999985
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHc
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASA 680 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeA 680 (1201)
.. ++....++.|+|+..+....+.++|++.+.-+.
T Consensus 199 ~~--Pl~~~~~~~g~hi~~iGs~~p~~~El~~~~~~~ 233 (304)
T PRK07340 199 RT--PVYPEAARAGRLVVAVGAFTPDMAELAPRTVRG 233 (304)
T ss_pred CC--ceeCccCCCCCEEEecCCCCCCcccCCHHHHhh
Confidence 42 333445799999999976667777777654444
|
|
| >PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway | Back alignment and domain information |
|---|
Probab=97.81 E-value=2.6e-05 Score=76.45 Aligned_cols=104 Identities=23% Similarity=0.308 Sum_probs=69.9
Q ss_pred cCchhHHHHHHHHHhCC---CCe-EEEEeCC--HHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcCCC
Q psy12817 572 GAGYVSRPLIEYLHRDE---NIH-ITLGSLL--KEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLLPY 643 (1201)
Q Consensus 572 GAG~VG~~va~~La~~~---~~~-VtVadR~--~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~lP~ 643 (1201)
|+|.||+.+++.|.+.. +++ +.|++|+ .... .....++... ...+.+++. +.|+||.|++.
T Consensus 1 G~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~~dvvVE~t~~ 69 (117)
T PF03447_consen 1 GFGNVGRGLLEQLKEQQERIDLEVVGVADRSMLISKD--WAASFPDEAF---------TTDLEELIDDPDIDVVVECTSS 69 (117)
T ss_dssp --SHHHHHHHHHHHHTHHHCEEEEEEEEESSEEEETT--HHHHHTHSCE---------ESSHHHHHTHTT-SEEEE-SSC
T ss_pred CCCHHHHHHHHHHHhCcccCCEEEEEEEECCchhhhh--hhhhcccccc---------cCCHHHHhcCcCCCEEEECCCc
Confidence 89999999999998875 566 5578888 1111 1111112221 123555665 89999999876
Q ss_pred cccHHHHHHHHHcCCeEEEccC--Ch--HHHHHHHHHHHHcCCEEEe
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASY--LS--PEMMALHERAASAGITVLN 686 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Sy--vs--~e~~eLde~AkeAGVtil~ 686 (1201)
..-.+.++.++++|+|+|+.+- .+ ...++|.+.|++.|+.+.-
T Consensus 70 ~~~~~~~~~~L~~G~~VVt~nk~ala~~~~~~~L~~~A~~~g~~~~~ 116 (117)
T PF03447_consen 70 EAVAEYYEKALERGKHVVTANKGALADEALYEELREAARKNGVRIYY 116 (117)
T ss_dssp HHHHHHHHHHHHTTCEEEES-HHHHHSHHHHHHHHHHHHHHT-EEEE
T ss_pred hHHHHHHHHHHHCCCeEEEECHHHhhhHHHHHHHHHHHHHcCCEEEe
Confidence 6667889999999999999962 44 5678899999999998764
|
Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D .... |
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00028 Score=82.98 Aligned_cols=126 Identities=21% Similarity=0.284 Sum_probs=91.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCC-CCeEE-E-EeCCHHHHHHHHHHcCCeeEEE-ee-----------------cCCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDE-NIHIT-L-GSLLKEDIDKVTNEFGRVEATL-ID-----------------VNNG 622 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~-~~~Vt-V-adR~~ekAe~La~~~~~v~~v~-lD-----------------V~D~ 622 (1201)
||||.|+| +|.||+.+++.+.+.+ .++|+ + ++++.+++.++++++. -+.+. .| +..|
T Consensus 1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~-p~~v~i~~~~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFR-PKYVVVADEEAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred CceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhC-CCEEEEcCHHHHHHHHHhhccCCceEEEC
Confidence 68999999 8999999999887754 46654 3 3899999999888872 22221 11 1000
Q ss_pred CchHHHhhcc--CCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhH
Q psy12817 623 GSDNLSGLVR--SADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGID 695 (1201)
Q Consensus 623 ~~e~L~elI~--~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGId 695 (1201)
.+.+.+++. ++|+|+++++...|..-..+|+++|++++++. -....-..+.+.|++.|..+++ +|+.-.
T Consensus 80 -~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLANKEslV~aG~~i~~~a~~~g~~i~P---VDSEh~ 152 (385)
T PRK05447 80 -EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALANKESLVCAGELVMDAAKKSGAQILP---VDSEHS 152 (385)
T ss_pred -hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeCHHHHHhhHHHHHHHHHHcCCeEEE---ECHHHH
Confidence 234555554 57999999999889888999999999999973 2224456677789999999887 466533
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00011 Score=85.98 Aligned_cols=78 Identities=21% Similarity=0.426 Sum_probs=64.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH-----cCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE-----FGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~-----~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.+.|||+|.| +|++|+.+++.|.++++.+|++.+|+.++.+.+... .++++.+..|+.| .+.+.++++++|+
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d--~~~l~~~~~~~d~ 89 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKH--DSRLEGLIKMADL 89 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCC--hHHHHHHhhcCCE
Confidence 4568999999 799999999999987667899899887766554321 1358889999998 7889999999999
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
||+|..
T Consensus 90 ViHlAa 95 (386)
T PLN02427 90 TINLAA 95 (386)
T ss_pred EEEccc
Confidence 999984
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00011 Score=77.89 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=78.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||.||| +|.+|+.+++.+.++ +++||..-|++++.... +++...+.|+.| .+.+.+.+.++|+||++....
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R-GHeVTAivRn~~K~~~~----~~~~i~q~Difd--~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR-GHEVTAIVRNASKLAAR----QGVTILQKDIFD--LTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC-CCeeEEEEeChHhcccc----ccceeecccccC--hhhhHhhhcCCceEEEeccCC
Confidence 6999999 699999999999887 58999999999887643 367889999998 889999999999999998543
Q ss_pred --ccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE---EEeccc---cCch
Q psy12817 645 --LHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT---VLNEVG---LDPG 693 (1201)
Q Consensus 645 --~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt---il~e~G---lDPG 693 (1201)
-+.+... ...+.|.+..+.+|++ ++.+.| +|||
T Consensus 74 ~~~~~~~~~----------------k~~~~li~~l~~agv~RllVVGGAGSL~id~g 114 (211)
T COG2910 74 ASDNDELHS----------------KSIEALIEALKGAGVPRLLVVGGAGSLEIDEG 114 (211)
T ss_pred CCChhHHHH----------------HHHHHHHHHHhhcCCeeEEEEcCccceEEcCC
Confidence 2222111 1234455566666654 566666 5555
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00019 Score=77.59 Aligned_cols=100 Identities=21% Similarity=0.327 Sum_probs=71.7
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC-------------------HHHHHHHHHHc----CCeeEEEe-
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL-------------------KEDIDKVTNEF----GRVEATLI- 617 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~-------------------~ekAe~La~~~----~~v~~v~l- 617 (1201)
.....||+|+|+|.+|..+++.|++.+--+++++|++ ..|++.+++.+ |.++....
T Consensus 18 kl~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 18 RLLNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred HhcCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 3567899999999999999999999876689999987 23454444332 44443322
Q ss_pred -ecCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 618 -DVNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 618 -DV~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~S 664 (1201)
.+. .+.+.++++++|+||+|+... ....+.+.|.++++.+++.+
T Consensus 98 ~~i~---~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip~i~~~ 143 (202)
T TIGR02356 98 ERVT---AENLELLINNVDLVLDCTDNFATRYLINDACVALGTPLISAA 143 (202)
T ss_pred hcCC---HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 232 356778899999999998532 33456778888888877754
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=97.72 E-value=7.7e-05 Score=86.27 Aligned_cols=105 Identities=12% Similarity=0.159 Sum_probs=77.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++|+|||+|.+|+.++..+.. .+-.+|+|.+|+.++++++++++. +++ +... +++++++.++|+||+|
T Consensus 132 ~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~---v~~~----~d~~~al~~aDiVi~a 204 (330)
T PRK08291 132 ASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP---VTVA----RDVHEAVAGADIIVTT 204 (330)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce---EEEe----CCHHHHHccCCEEEEe
Confidence 4799999999999999999885 343569999999999999988653 222 2222 2467788899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERA 677 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~A 677 (1201)
+|.. .+-+-...++.|+|+.+.....+.+++++...
T Consensus 205 T~s~-~p~i~~~~l~~g~~v~~vg~d~~~~rEld~~~ 240 (330)
T PRK08291 205 TPSE-EPILKAEWLHPGLHVTAMGSDAEHKNEIAPAV 240 (330)
T ss_pred eCCC-CcEecHHHcCCCceEEeeCCCCCCcccCCHHH
Confidence 9864 22222345789999988765556666665544
|
|
| >PRK06046 alanine dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.72 E-value=6.2e-05 Score=86.93 Aligned_cols=115 Identities=17% Similarity=0.214 Sum_probs=81.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.++|+|||+|.+|+.+++.+....+++ |.|+||+.++++++++++.......+.+.+ +++++++ +|+|++|+|.
T Consensus 129 ~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~l~-aDiVv~aTps 203 (326)
T PRK06046 129 SKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAE----DIEEACD-CDILVTTTPS 203 (326)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeC----CHHHHhh-CCEEEEecCC
Confidence 479999999999999999998655555 889999999999988776311001112222 3556665 9999999996
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEE
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil 685 (1201)
. .+-+-...++.|+|+..+.-..|.+++++.+.-+..-.++
T Consensus 204 ~-~P~~~~~~l~~g~hV~~iGs~~p~~~El~~~~~~~a~vvv 244 (326)
T PRK06046 204 R-KPVVKAEWIKEGTHINAIGADAPGKQELDPEILLRAKVVV 244 (326)
T ss_pred C-CcEecHHHcCCCCEEEecCCCCCccccCCHHHHhCCcEEE
Confidence 4 2334455679999998887666777787766544443443
|
|
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00014 Score=82.34 Aligned_cols=105 Identities=20% Similarity=0.336 Sum_probs=80.5
Q ss_pred EEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCccc-HH
Q psy12817 570 LLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNLH-HH 648 (1201)
Q Consensus 570 ILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~h-~~ 648 (1201)
+||+|.||.+++..|.+. +++|++.||+.++++.+.+. ++. +. ++..++++++|+||.|+|...+ ..
T Consensus 1 ~IGlG~mG~~mA~~L~~~-G~~V~v~dr~~~~~~~l~~~--g~~-----~~----~s~~~~~~~advVil~vp~~~~~~~ 68 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKA-GHPVRVFDLFPDAVEEAVAA--GAQ-----AA----ASPAEAAEGADRVITMLPAGQHVIS 68 (288)
T ss_pred CCcccHhHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHc--CCe-----ec----CCHHHHHhcCCEEEEeCCChHHHHH
Confidence 589999999999999986 57899999999999887653 332 12 2456778899999999997443 33
Q ss_pred HH------HHHHHcCCeEEEccCChHH-HHHHHHHHHHcCCEEEe
Q psy12817 649 VA------EFCIQHGKNLVTASYLSPE-MMALHERAASAGITVLN 686 (1201)
Q Consensus 649 Va------kacIeaGkh~VD~Syvs~e-~~eLde~AkeAGVtil~ 686 (1201)
+. ..+++.|+.++|.|.+++. .+++.+.++++|+.++.
T Consensus 69 v~~g~~~l~~~~~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vd 113 (288)
T TIGR01692 69 VYSGDEGILPKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMD 113 (288)
T ss_pred HHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 33 2345678889999987664 67888899999998765
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00013 Score=80.19 Aligned_cols=116 Identities=15% Similarity=0.157 Sum_probs=77.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCC--eEEEEeCC----HHHH-------HHHHHHcCCeeEEEeecCCCCchHHHh
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENI--HITLGSLL----KEDI-------DKVTNEFGRVEATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~--~VtVadR~----~ekA-------e~La~~~~~v~~v~lDV~D~~~e~L~e 629 (1201)
.+.+||+|+|+|.+|+.++..|.+.+-. +|+++||+ .+++ +.+++.+.. . +. + ..+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~-~----~~-~---~~l~~ 93 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNP-E----KT-G---GTLKE 93 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhcc-C----cc-c---CCHHH
Confidence 4568999999999999999999887555 79999999 4544 444444311 1 11 1 13656
Q ss_pred hccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE-EEecccc
Q psy12817 630 LVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT-VLNEVGL 690 (1201)
Q Consensus 630 lI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt-il~e~Gl 690 (1201)
.++++|+||+++|.. +.+.+++... .+.-+++++ .|....+.++|++.|.. +.++.++
T Consensus 94 ~l~~~dvlIgaT~~G~~~~~~l~~m~-~~~ivf~ls--nP~~e~~~~~A~~~ga~i~a~G~~~ 153 (226)
T cd05311 94 ALKGADVFIGVSRPGVVKKEMIKKMA-KDPIVFALA--NPVPEIWPEEAKEAGADIVATGRSD 153 (226)
T ss_pred HHhcCCEEEeCCCCCCCCHHHHHhhC-CCCEEEEeC--CCCCcCCHHHHHHcCCcEEEeCCCC
Confidence 778899999999644 4455555443 344455665 22234577889999995 6665443
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00032 Score=77.11 Aligned_cols=83 Identities=18% Similarity=0.305 Sum_probs=64.8
Q ss_pred cccccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-cCCcE
Q psy12817 559 DIQTEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-RSADL 636 (1201)
Q Consensus 559 ~~~~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-~~~DV 636 (1201)
+.+...+++|+|+| +|++|+.+++.|++. +++|++..|+.++++.+....+++..+..|+.| ..+.+.+.+ .++|+
T Consensus 11 ~~~~~~~~~ilItGasG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~l~~~~~~~~d~ 88 (251)
T PLN00141 11 DAENVKTKTVFVAGATGRTGKRIVEQLLAK-GFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTE-GSDKLVEAIGDDSDA 88 (251)
T ss_pred ccccccCCeEEEECCCcHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhcccCCceEEEEeeCCC-CHHHHHHHhhcCCCE
Confidence 33456689999999 699999999999886 578998999988876554332358889999987 235676777 68999
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++++.
T Consensus 89 vi~~~g~ 95 (251)
T PLN00141 89 VICATGF 95 (251)
T ss_pred EEECCCC
Confidence 9998764
|
|
| >PRK08374 homoserine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00044 Score=80.43 Aligned_cols=150 Identities=19% Similarity=0.204 Sum_probs=91.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC-------CC--Ce-EEEEeCC----------HHHHHHHHHHcCCeeEEEeecCCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD-------EN--IH-ITLGSLL----------KEDIDKVTNEFGRVEATLIDVNNGGS 624 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~-------~~--~~-VtVadR~----------~ekAe~La~~~~~v~~v~lDV~D~~~ 624 (1201)
+.+|+|+|+|.||+.+++.|.++ .+ .+ +.|+|++ .+++.+..+....+.....+... ..
T Consensus 2 ~i~VaIiG~GnVG~~~~~~L~~~~~~l~~~~G~~l~VvaV~ds~~~~~~~~Gid~~~l~~~~~~~~~~~~~~~~~~~-~~ 80 (336)
T PRK08374 2 EVKVSIFGFGNVGRAVAEVLAEKSRVFKERYGVELKVVSITDTSGTIWLPEDIDLREAKEVKENFGKLSNWGNDYEV-YN 80 (336)
T ss_pred eeEEEEECCCHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCccccCCCCCChHHHHHhhhccCchhhccccccc-cC
Confidence 47999999999999999988763 23 45 4466654 22333323222111111000000 00
Q ss_pred hHHHhhc--cCCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 625 DNLSGLV--RSADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 625 e~L~elI--~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
-...+++ .++|+||++++...+..+...|++.|+|+|+.+ ..+....+|.+.|+++|+.++-+.++.-|+--+-
T Consensus 81 ~~~~ell~~~~~DVvVd~t~~~~a~~~~~~al~~G~~VVtanK~~la~~~~el~~la~~~~~~~~~ea~v~~GiPii~-- 158 (336)
T PRK08374 81 FSPEEIVEEIDADIVVDVTNDKNAHEWHLEALKEGKSVVTSNKPPIAFHYDELLDLANERNLPYLFEATVMAGTPIIG-- 158 (336)
T ss_pred CCHHHHHhcCCCCEEEECCCcHHHHHHHHHHHhhCCcEEECCHHHHHhCHHHHHHHHHHcCCeEEEeccccccCCchH--
Confidence 1344555 379999999987777889999999999999985 3444456777789999999987766544432221
Q ss_pred HHHHHhhhcCCcEEEEEee
Q psy12817 701 ECIDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 701 ~~idei~~~ggkV~sf~s~ 719 (1201)
.+.+.- .|.+|.+|.-.
T Consensus 159 -~l~~~l-~g~~i~~i~GI 175 (336)
T PRK08374 159 -LLRENL-LGDTVKRIEAV 175 (336)
T ss_pred -HHHhhc-cccceEEEEEE
Confidence 122222 45666666543
|
|
| >PRK06392 homoserine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00036 Score=80.78 Aligned_cols=117 Identities=16% Similarity=0.222 Sum_probs=73.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhC-------CCCe-EEEEeCCHHH-------HHHHHHHcCCeeEEEeecC--CCCchHHH
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRD-------ENIH-ITLGSLLKED-------IDKVTNEFGRVEATLIDVN--NGGSDNLS 628 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~-------~~~~-VtVadR~~ek-------Ae~La~~~~~v~~v~lDV~--D~~~e~L~ 628 (1201)
+||+|+|+|.||+.+++.|.+. .+++ |.|+|++... .+++.+...+-.....+.. + .+.+.
T Consensus 1 mrVaIiGfG~VG~~va~~L~~~~~~~~~g~~l~VVaVsds~g~l~~~~Gldl~~l~~~~~~g~l~~~~~~~~~--~~~ll 78 (326)
T PRK06392 1 IRISIIGLGNVGLNVLRIIKSRNDDRRNNNGISVVSVSDSKLSYYNERGLDIGKIISYKEKGRLEEIDYEKIK--FDEIF 78 (326)
T ss_pred CEEEEECCCHHHHHHHHHHHhCHHhHhcCCCeEEEEEEECCCcccCCcCCChHHHHHHHhcCccccCCCCcCC--HHHHh
Confidence 4899999999999999999764 2445 4466665321 1222211110000011111 2 23332
Q ss_pred hhccCCcEEEEcCCCcc----cHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEe
Q psy12817 629 GLVRSADLVVSLLPYNL----HHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 629 elI~~~DVVIs~lP~~~----h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~ 686 (1201)
+ .++|+||.|+|... .....+.|+++|+|+|+++ .......+|.+.|+++|+.+..
T Consensus 79 ~--~~~DVvVE~t~~~~~g~~~~~~~~~aL~~G~hVVTaNKgalA~~~~eL~~lA~~~g~~~~~ 140 (326)
T PRK06392 79 E--IKPDVIVDVTPASKDGIREKNLYINAFEHGIDVVTANKSGLANHWHDIMDSASKNRRIIRY 140 (326)
T ss_pred c--CCCCEEEECCCCCCcCchHHHHHHHHHHCCCEEEcCCHHHHHhhHHHHHHHHHHcCCeEEE
Confidence 2 37999999998532 2456699999999999996 3445567788889999988864
|
|
| >TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0001 Score=85.16 Aligned_cols=111 Identities=15% Similarity=0.153 Sum_probs=80.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.++++|||+|.+|+..++.+... +..+|.|.||+.++++++++++.... +.+.+. ++.+++++++|+|+.|+|.
T Consensus 128 ~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g-~~v~~~----~~~~eav~~aDiVitaT~s 202 (325)
T TIGR02371 128 SSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYE-VPVRAA----TDPREAVEGCDILVTTTPS 202 (325)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhC-CcEEEe----CCHHHHhccCCEEEEecCC
Confidence 47899999999999999888654 33469999999999999887652110 011122 2456778899999999985
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcC
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAG 681 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAG 681 (1201)
. .+-+-...++.|+|+..+....+.+++++...-+..
T Consensus 203 ~-~P~~~~~~l~~g~~v~~vGs~~p~~~Eld~~~l~~a 239 (325)
T TIGR02371 203 R-KPVVKADWVSEGTHINAIGADAPGKQELDPEILKNA 239 (325)
T ss_pred C-CcEecHHHcCCCCEEEecCCCCcccccCCHHHHhcC
Confidence 3 333445678999999988766677788776644443
|
This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity. |
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00025 Score=77.75 Aligned_cols=89 Identities=20% Similarity=0.329 Sum_probs=64.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC--CCe-EEEEeC-CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE--NIH-ITLGSL-LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~--~~~-VtVadR-~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
++||+|||+|.+|+.++..|.+.+ ..+ +++.+| +.+++++++..+ ++.. .+ +.+++++++|+||.|
T Consensus 4 ~~kI~iIG~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~-----~~----~~~~~~~~~DiViia 73 (245)
T PRK07634 4 KHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARY-NVST-----TT----DWKQHVTSVDTIVLA 73 (245)
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHc-CcEE-----eC----ChHHHHhcCCEEEEe
Confidence 478999999999999999998764 344 777887 578888888766 3332 11 245566789999999
Q ss_pred CCCcccHHHHHHHHH--cCCeEEEc
Q psy12817 641 LPYNLHHHVAEFCIQ--HGKNLVTA 663 (1201)
Q Consensus 641 lP~~~h~~VakacIe--aGkh~VD~ 663 (1201)
+|...|.++++.... .++.+|..
T Consensus 74 vp~~~~~~v~~~l~~~~~~~~vis~ 98 (245)
T PRK07634 74 MPPSAHEELLAELSPLLSNQLVVTV 98 (245)
T ss_pred cCHHHHHHHHHHHHhhccCCEEEEE
Confidence 999888888765432 24445554
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00042 Score=85.24 Aligned_cols=78 Identities=13% Similarity=0.243 Sum_probs=65.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-------------CCeeEEEeecCCCCchHHH
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-------------GRVEATLIDVNNGGSDNLS 628 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-------------~~v~~v~lDV~D~~~e~L~ 628 (1201)
.+.+.|+|+| +|++|+.+++.|++. +++|++++|+.++++.+...+ .++.++.+|+.| .+.+.
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~-G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD--~esI~ 154 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK--PDQIG 154 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--HHHHH
Confidence 4457899999 699999999999986 578999999999887765422 246788999998 88899
Q ss_pred hhccCCcEEEEcCCC
Q psy12817 629 GLVRSADLVVSLLPY 643 (1201)
Q Consensus 629 elI~~~DVVIs~lP~ 643 (1201)
+.+.++|+||+++..
T Consensus 155 ~aLggiDiVVn~AG~ 169 (576)
T PLN03209 155 PALGNASVVICCIGA 169 (576)
T ss_pred HHhcCCCEEEEcccc
Confidence 999999999999854
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00017 Score=83.85 Aligned_cols=104 Identities=17% Similarity=0.186 Sum_probs=74.9
Q ss_pred cccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH---------------------HHHHHHHH----HcCCee
Q psy12817 559 DIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK---------------------EDIDKVTN----EFGRVE 613 (1201)
Q Consensus 559 ~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~---------------------ekAe~La~----~~~~v~ 613 (1201)
.++..+.++|+|+|+|.+|..++++|++.+--+++++|++. .|++.+++ ..|+++
T Consensus 18 ~Q~~L~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~ 97 (338)
T PRK12475 18 GQRKIREKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVE 97 (338)
T ss_pred HHHhhcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcE
Confidence 34456678999999999999999999998655899999874 24433332 235443
Q ss_pred --EEEeecCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEccC
Q psy12817 614 --ATLIDVNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 614 --~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~Sy 665 (1201)
++..|++ .+.+.++++++|+||+|+-.. ....+.+.|.+.|+.+|..+.
T Consensus 98 i~~~~~~~~---~~~~~~~~~~~DlVid~~D~~~~r~~in~~~~~~~ip~i~~~~ 149 (338)
T PRK12475 98 IVPVVTDVT---VEELEELVKEVDLIIDATDNFDTRLLINDLSQKYNIPWIYGGC 149 (338)
T ss_pred EEEEeccCC---HHHHHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 4444554 357888999999999999432 234567888888988887643
|
|
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00052 Score=78.23 Aligned_cols=108 Identities=18% Similarity=0.300 Sum_probs=78.2
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
+||.+||+|.||.++++.|.+. +++|++.+|++. ++++.+ . ++.. + +...++++++|+||.|+|..-
T Consensus 1 m~Ig~IGlG~MG~~ma~~L~~~-G~~v~v~~~~~~-~~~~~~-~-g~~~----~-----~s~~~~~~~advVi~~v~~~~ 67 (292)
T PRK15059 1 MKLGFIGLGIMGTPMAINLARA-GHQLHVTTIGPV-ADELLS-L-GAVS----V-----ETARQVTEASDIIFIMVPDTP 67 (292)
T ss_pred CeEEEEccCHHHHHHHHHHHHC-CCeEEEEeCCHh-HHHHHH-c-CCee----c-----CCHHHHHhcCCEEEEeCCChH
Confidence 3799999999999999999986 478999999874 555543 2 3321 1 134456679999999999652
Q ss_pred c-HHHH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 646 H-HHVA------EFCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 646 h-~~Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
. ..+. ...+..|+-+||.|.+++ ..+++.+.+++.|+.++.
T Consensus 68 ~v~~v~~~~~g~~~~~~~g~ivvd~sT~~p~~~~~~~~~~~~~G~~~vd 116 (292)
T PRK15059 68 QVEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLD 116 (292)
T ss_pred HHHHHHcCCcchhccCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 2 1221 112356788999987665 467799999999998875
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00046 Score=79.10 Aligned_cols=77 Identities=19% Similarity=0.264 Sum_probs=63.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHc--CCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEF--GRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~--~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+.++|+|.| +|++|+.+++.|++.+ ..+|++.+|+..+...+...+ +++.++..|+.| .+.+.++++++|+||+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d--~~~l~~~~~~iD~Vih 80 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD--KERLTRALRGVDYVVH 80 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHhcCCEEEE
Confidence 458999999 7999999999999874 468999999877655554443 357788999998 8899999999999999
Q ss_pred cCC
Q psy12817 640 LLP 642 (1201)
Q Consensus 640 ~lP 642 (1201)
+..
T Consensus 81 ~Ag 83 (324)
T TIGR03589 81 AAA 83 (324)
T ss_pred Ccc
Confidence 974
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK07680 late competence protein ComER; Validated | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00022 Score=79.96 Aligned_cols=90 Identities=12% Similarity=0.185 Sum_probs=66.6
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC---CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN---IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~---~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
++|.|||+|.||..++..|.+.+. .+|++.+|+.++++.+.+.++++.. .+ ...++++++|+||.|+|
T Consensus 1 m~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~-----~~----~~~~~~~~aDiVilav~ 71 (273)
T PRK07680 1 MNIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHV-----AK----TIEEVISQSDLIFICVK 71 (273)
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEE-----EC----CHHHHHHhCCEEEEecC
Confidence 479999999999999999987653 3689999999999888776644432 11 23445678999999998
Q ss_pred CcccHHHHHHH---HHcCCeEEEcc
Q psy12817 643 YNLHHHVAEFC---IQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~Vakac---IeaGkh~VD~S 664 (1201)
.....++++.. +..++.+++++
T Consensus 72 p~~~~~vl~~l~~~l~~~~~iis~~ 96 (273)
T PRK07680 72 PLDIYPLLQKLAPHLTDEHCLVSIT 96 (273)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEEC
Confidence 76666666553 33466777775
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00017 Score=71.18 Aligned_cols=94 Identities=15% Similarity=0.324 Sum_probs=66.1
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHcCCeeEE-EeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEFGRVEAT-LIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~~~v~~v-~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
||+|+| .|.+|+.++..|.+.++++++.+ +++.++.+.+...++.+.-. ..++. .+.+. ..++|+|+.|+|.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~DvV~~~~~~ 75 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELE---PEDFE--ELAVDIVFLALPH 75 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccc---cCChh--hcCCCEEEEcCCc
Confidence 689999 59999999999999888886544 76665555555555433211 11222 22333 2489999999999
Q ss_pred cccHHH---HHHHHHcCCeEEEccC
Q psy12817 644 NLHHHV---AEFCIQHGKNLVTASY 665 (1201)
Q Consensus 644 ~~h~~V---akacIeaGkh~VD~Sy 665 (1201)
..|.++ +..+++.|+.++|.|.
T Consensus 76 ~~~~~~~~~~~~~~~~g~~viD~s~ 100 (122)
T smart00859 76 GVSKEIAPLLPKAAEAGVKVIDLSS 100 (122)
T ss_pred HHHHHHHHHHHhhhcCCCEEEECCc
Confidence 888775 3455689999999874
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00037 Score=82.02 Aligned_cols=102 Identities=23% Similarity=0.298 Sum_probs=74.9
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC-------------------HHHHHHHHHHc----CCeeEEEee
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL-------------------KEDIDKVTNEF----GRVEATLID 618 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~-------------------~ekAe~La~~~----~~v~~v~lD 618 (1201)
..+.++|+|+|+|.+|..++.+|++.+--+++++|++ ..|++.+++.+ |.++....+
T Consensus 132 ~l~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 132 RLLEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HHhcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 4567899999999999999999999876679999988 44665555443 554433222
Q ss_pred cCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 619 VNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 619 V~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
..= +.+.+.++++++|+||+|+-. .....+.+.|.+.++.+|..+
T Consensus 212 ~~~-~~~~~~~~~~~~D~Vv~~~d~~~~r~~ln~~~~~~~ip~i~~~ 257 (376)
T PRK08762 212 ERV-TSDNVEALLQDVDVVVDGADNFPTRYLLNDACVKLGKPLVYGA 257 (376)
T ss_pred ccC-ChHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 110 135677888999999999843 334567889999999998864
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00022 Score=82.94 Aligned_cols=102 Identities=22% Similarity=0.238 Sum_probs=74.1
Q ss_pred cccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH---------------------HHHHHHHHH----cCCe--e
Q psy12817 561 QTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK---------------------EDIDKVTNE----FGRV--E 613 (1201)
Q Consensus 561 ~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~---------------------ekAe~La~~----~~~v--~ 613 (1201)
+..+..||+|+|+|.+|..++.+|++.+--+|+++|.+. .+++.+++. .|.+ +
T Consensus 20 ~~L~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~ 99 (339)
T PRK07688 20 QKLREKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE 99 (339)
T ss_pred HHhcCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence 346678999999999999999999998655899999873 233333222 2443 3
Q ss_pred EEEeecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEccC
Q psy12817 614 ATLIDVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 614 ~v~lDV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~Sy 665 (1201)
....+++ .+.+.++++++|+||+|+-. .....+.+.|.+.++.+|..+.
T Consensus 100 ~~~~~~~---~~~~~~~~~~~DlVid~~Dn~~~r~~ln~~~~~~~iP~i~~~~ 149 (339)
T PRK07688 100 AIVQDVT---AEELEELVTGVDLIIDATDNFETRFIVNDAAQKYGIPWIYGAC 149 (339)
T ss_pred EEeccCC---HHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEee
Confidence 4444544 45678889999999999843 3446678889999998887653
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00043 Score=82.77 Aligned_cols=94 Identities=26% Similarity=0.312 Sum_probs=70.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.++.+|...+..+|++++|+.++++.++..++ ... . + .+.+.+.+.++|+||+|+|
T Consensus 180 ~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g-~~~--~---~--~~~~~~~l~~aDvVI~aT~ 251 (423)
T PRK00045 180 LSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG-GEA--I---P--LDELPEALAEADIVISSTG 251 (423)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC-CcE--e---e--HHHHHHHhccCCEEEECCC
Confidence 456899999999999999999987654479999999999999998874 222 1 2 3456777889999999997
Q ss_pred Cc---ccHHHHHHHHHc----CCeEEEcc
Q psy12817 643 YN---LHHHVAEFCIQH----GKNLVTAS 664 (1201)
Q Consensus 643 ~~---~h~~VakacIea----Gkh~VD~S 664 (1201)
.. .....++.+++. +.-++|++
T Consensus 252 s~~~~i~~~~l~~~~~~~~~~~~vviDla 280 (423)
T PRK00045 252 APHPIIGKGMVERALKARRHRPLLLVDLA 280 (423)
T ss_pred CCCcEEcHHHHHHHHhhccCCCeEEEEeC
Confidence 43 345555555432 24588886
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00062 Score=80.44 Aligned_cols=78 Identities=26% Similarity=0.392 Sum_probs=62.9
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHH------HHHHHcCCeeEEEeecCCCCchHHHhhcc--
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDID------KVTNEFGRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe------~La~~~~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
..++++|+|+| +|++|+.+++.|.++ +++|++.+|+.++++ .+....++++.+..|+.| .+.+.++++
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~~~ 133 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRR-GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLFSE 133 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHHHh
Confidence 44578999999 699999999999986 578999999876432 222234578899999998 888998887
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
++|+||+|+.
T Consensus 134 ~~~~D~Vi~~aa 145 (390)
T PLN02657 134 GDPVDVVVSCLA 145 (390)
T ss_pred CCCCcEEEECCc
Confidence 5899999974
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00035 Score=77.83 Aligned_cols=89 Identities=17% Similarity=0.197 Sum_probs=65.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE--NIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~--~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|++|.|||+|.+|..++..|.+.+ ..+|.+.+|+.++++++...+ ++. +.+ ...+.++++|+||.|+|
T Consensus 2 mm~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~-g~~-----~~~----~~~~~~~~advVil~v~ 71 (267)
T PRK11880 2 MKKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY-GVR-----AAT----DNQEAAQEADVVVLAVK 71 (267)
T ss_pred CCEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc-CCe-----ecC----ChHHHHhcCCEEEEEcC
Confidence 789999999999999999998763 257999999999998887765 332 122 23445678999999998
Q ss_pred CcccHHHHHHHHHc-CCeEEEc
Q psy12817 643 YNLHHHVAEFCIQH-GKNLVTA 663 (1201)
Q Consensus 643 ~~~h~~VakacIea-Gkh~VD~ 663 (1201)
.....++.+.+... ++.+++.
T Consensus 72 ~~~~~~v~~~l~~~~~~~vvs~ 93 (267)
T PRK11880 72 PQVMEEVLSELKGQLDKLVVSI 93 (267)
T ss_pred HHHHHHHHHHHHhhcCCEEEEe
Confidence 77666766655432 4455554
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00075 Score=71.84 Aligned_cols=75 Identities=16% Similarity=0.251 Sum_probs=63.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---CCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---SADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---~~DVVIs~ 640 (1201)
||+++|.| +|.+|+.+++.|+++ .+|++.+|+.++++++....+++..+..|+.| .+.+.++++ +.|+||++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT--HTLLLGGRPAERLDELAAELPGATPFPVDLTD--PEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh--CCEEEEeCCHHHHHHHHHHhccceEEecCCCC--HHHHHHHHHhcCCCCEEEEC
Confidence 57999999 699999999999986 78999999998877776555568889999998 888888876 48999999
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 843
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00023 Score=73.74 Aligned_cols=92 Identities=21% Similarity=0.344 Sum_probs=65.9
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeE-EEeecCCCCchHHHhhccCCcEEEE
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEA-TLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~-v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
||.|+|+|..|.+++..|++++ .+|++.+|+.+.++.+.... ++.+. ..+.++ .++++.++++|+||.
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g-~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t----~dl~~a~~~ad~Iii 75 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNG-HEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT----TDLEEALEDADIIII 75 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCT-EEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE----SSHHHHHTT-SEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcC-CEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc----cCHHHHhCcccEEEe
Confidence 7999999999999999999875 78999999999998887643 22111 012233 357888899999999
Q ss_pred cCCCcccHHHHHHHH---HcCCeEEEc
Q psy12817 640 LLPYNLHHHVAEFCI---QHGKNLVTA 663 (1201)
Q Consensus 640 ~lP~~~h~~VakacI---eaGkh~VD~ 663 (1201)
++|...|..+++... +.++.++..
T Consensus 76 avPs~~~~~~~~~l~~~l~~~~~ii~~ 102 (157)
T PF01210_consen 76 AVPSQAHREVLEQLAPYLKKGQIIISA 102 (157)
T ss_dssp -S-GGGHHHHHHHHTTTSHTT-EEEET
T ss_pred cccHHHHHHHHHHHhhccCCCCEEEEe
Confidence 999999988777653 345555544
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00024 Score=81.90 Aligned_cols=97 Identities=15% Similarity=0.235 Sum_probs=76.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeE---EEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEA---TLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~---v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+|+||.|+| +|+.|.-+++.|..++++++.+++.+..+-+.+.+.+|+.+- ..+..-| .+.+ ...+||+|+-
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~--~~~~--~~~~~DvvFl 76 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTID--PEKI--ELDECDVVFL 76 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCC--hhhh--hcccCCEEEE
Confidence 479999999 799999999999999999988777666556667777776541 1122222 2223 3456999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
|+|.....+++...++.|+.++|+|
T Consensus 77 alPhg~s~~~v~~l~~~g~~VIDLS 101 (349)
T COG0002 77 ALPHGVSAELVPELLEAGCKVIDLS 101 (349)
T ss_pred ecCchhHHHHHHHHHhCCCeEEECC
Confidence 9999888999999999999999997
|
|
| >PRK06476 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00032 Score=78.01 Aligned_cols=90 Identities=12% Similarity=0.238 Sum_probs=65.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC--CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN--IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~--~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+||+|||+|.||+.+++.|.+.+. ..+.+.+|+.++++++++.++++.. .+ ...++++++|+|+.|+|.
T Consensus 1 m~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~-----~~----~~~~~~~~aDvVilav~p 71 (258)
T PRK06476 1 MKIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRI-----AK----DNQAVVDRSDVVFLAVRP 71 (258)
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceE-----eC----CHHHHHHhCCEEEEEeCH
Confidence 479999999999999999987642 2368899999999998887644332 11 244556789999999986
Q ss_pred cccHHHHHHH-HHcCCeEEEcc
Q psy12817 644 NLHHHVAEFC-IQHGKNLVTAS 664 (1201)
Q Consensus 644 ~~h~~Vakac-IeaGkh~VD~S 664 (1201)
..-.++++.. +..++++|+..
T Consensus 72 ~~~~~vl~~l~~~~~~~vis~~ 93 (258)
T PRK06476 72 QIAEEVLRALRFRPGQTVISVI 93 (258)
T ss_pred HHHHHHHHHhccCCCCEEEEEC
Confidence 5445555432 34677788764
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00087 Score=80.07 Aligned_cols=110 Identities=20% Similarity=0.320 Sum_probs=78.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.++.+|...+..+|++++|+.+++++++..++. .. ++ .+.+.+.+.++|+||+|++
T Consensus 178 l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~-~~--i~-----~~~l~~~l~~aDvVi~aT~ 249 (417)
T TIGR01035 178 LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG-EA--VK-----FEDLEEYLAEADIVISSTG 249 (417)
T ss_pred ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC-eE--ee-----HHHHHHHHhhCCEEEECCC
Confidence 4568999999999999999999887546899999999999989887732 22 12 3467788889999999986
Q ss_pred Cc---ccHHHHHHHHHcC---CeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 643 YN---LHHHVAEFCIQHG---KNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~---~h~~VakacIeaG---kh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
.. +....++.+...+ .-++|++. +.+.+.++ .|+.+++
T Consensus 250 s~~~ii~~e~l~~~~~~~~~~~~viDla~Prdid~~v~~l------~~v~l~~ 296 (417)
T TIGR01035 250 APHPIVSKEDVERALRERTRPLFIIDIAVPRDVDPAVARL------EGVFLYD 296 (417)
T ss_pred CCCceEcHHHHHHHHhcCCCCeEEEEeCCCCCCChhhcCc------CCeEEEE
Confidence 43 3455666655432 25778863 44443222 5666554
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00083 Score=81.39 Aligned_cols=122 Identities=14% Similarity=0.194 Sum_probs=87.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhcc---CCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVR---SADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~---~~DVVIs 639 (1201)
|.+|+|||.|.||.+++..|++. +++|++.||+.++++++.+... +.. +...+ .++++++ ++|+|+.
T Consensus 1 ~~~IgvIGLG~MG~~lA~nL~~~-G~~V~v~dr~~~~~~~l~~~~~~~g~~---i~~~~----s~~e~v~~l~~~d~Iil 72 (470)
T PTZ00142 1 MSDIGLIGLAVMGQNLALNIASR-GFKISVYNRTYEKTEEFVKKAKEGNTR---VKGYH----TLEELVNSLKKPRKVIL 72 (470)
T ss_pred CCEEEEEeEhHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhhhhcCCc---ceecC----CHHHHHhcCCCCCEEEE
Confidence 56899999999999999999987 5799999999999998876321 211 11222 3444444 6899999
Q ss_pred cCCCc-ccHHHHH---HHHHcCCeEEEccC-ChHHHHHHHHHHHHcCCEEEeccccCchhH
Q psy12817 640 LLPYN-LHHHVAE---FCIQHGKNLVTASY-LSPEMMALHERAASAGITVLNEVGLDPGID 695 (1201)
Q Consensus 640 ~lP~~-~h~~Vak---acIeaGkh~VD~Sy-vs~e~~eLde~AkeAGVtil~e~GlDPGId 695 (1201)
|+|+. ....+++ ..++.|.-++|.+- ......++.++++++|+.++ ++|+.-|..
T Consensus 73 ~v~~~~~v~~vi~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi~fl-dapVSGG~~ 132 (470)
T PTZ00142 73 LIKAGEAVDETIDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYL-GMGVSGGEE 132 (470)
T ss_pred EeCChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE-cCCCCCCHH
Confidence 98654 3344443 34567888999875 34567777789999999976 577665543
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.001 Score=71.88 Aligned_cols=114 Identities=13% Similarity=0.148 Sum_probs=78.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.+.|+|+|+|.|.||+.+++.|.+. +.+|++.|++.++++++.+.+ +.+. ++ .+++.. .++|+++.|..
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~~-g~~~--v~-----~~~l~~--~~~Dv~vp~A~ 94 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEE-GAKLIVADINEEAVARAAELF-GATV--VA-----PEEIYS--VDADVFAPCAL 94 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHc-CCEE--Ec-----chhhcc--ccCCEEEeccc
Confidence 4568999999999999999999986 579999999999998888766 3332 22 122222 27999998864
Q ss_pred -CcccHHHHHHHHHcCCeEEEccCChHHH-HHHHHHHHHcCCEEEecccc
Q psy12817 643 -YNLHHHVAEFCIQHGKNLVTASYLSPEM-MALHERAASAGITVLNEVGL 690 (1201)
Q Consensus 643 -~~~h~~VakacIeaGkh~VD~Syvs~e~-~eLde~AkeAGVtil~e~Gl 690 (1201)
...+...++ +.+..+|...-..+-. .+-++..++.|+.++++++.
T Consensus 95 ~~~I~~~~~~---~l~~~~v~~~AN~~~~~~~~~~~L~~~Gi~~~Pd~~~ 141 (200)
T cd01075 95 GGVINDDTIP---QLKAKAIAGAANNQLADPRHGQMLHERGILYAPDYVV 141 (200)
T ss_pred ccccCHHHHH---HcCCCEEEECCcCccCCHhHHHHHHHCCCEEeCceee
Confidence 345555543 3355666654322222 34455678899999997665
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00034 Score=74.77 Aligned_cols=125 Identities=18% Similarity=0.274 Sum_probs=81.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe-----e--------EEEeecCCCCchHHHhhcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV-----E--------ATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v-----~--------~v~lDV~D~~~e~L~elI~ 632 (1201)
|||.|+|.|++|.+++-.|++. +++|+.+|.+.++.+.+.+...-+ . .-.+.++ .+..+.++
T Consensus 1 M~I~ViGlGyvGl~~A~~lA~~-G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t----~~~~~ai~ 75 (185)
T PF03721_consen 1 MKIAVIGLGYVGLPLAAALAEK-GHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRAT----TDIEEAIK 75 (185)
T ss_dssp -EEEEE--STTHHHHHHHHHHT-TSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEE----SEHHHHHH
T ss_pred CEEEEECCCcchHHHHHHHHhC-CCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhh----hhhhhhhh
Confidence 7999999999999999999987 589999999999999887643100 0 0001122 23455677
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHh
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei 706 (1201)
++|+++.|+|..... ..-.|.+|+...++.+.+.. +.|..++.+.-+-||...=+....+++.
T Consensus 76 ~adv~~I~VpTP~~~----------~~~~Dls~v~~a~~~i~~~l-~~~~lvV~~STvppGtt~~~~~~ile~~ 138 (185)
T PF03721_consen 76 DADVVFICVPTPSDE----------DGSPDLSYVESAIESIAPVL-RPGDLVVIESTVPPGTTEELLKPILEKR 138 (185)
T ss_dssp H-SEEEE----EBET----------TTSBETHHHHHHHHHHHHHH-CSCEEEEESSSSSTTHHHHHHHHHHHHH
T ss_pred ccceEEEecCCCccc----------cCCccHHHHHHHHHHHHHHH-hhcceEEEccEEEEeeehHhhhhhhhhh
Confidence 899999999876542 34567788777777775444 4488889999999998875555555554
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00084 Score=76.66 Aligned_cols=94 Identities=19% Similarity=0.212 Sum_probs=65.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.++|+|||+|.+|..++..|.+.+. .+|++++|++++++.+.+ . ++.. .+. ....+.++++|+||.|+|.
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~-~-g~~~---~~~----~~~~~~~~~aDvViiavp~ 76 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE-L-GLGD---RVT----TSAAEAVKGADLVILCVPV 76 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh-C-CCCc---eec----CCHHHHhcCCCEEEECCCH
Confidence 4799999999999999999987653 479999999988776543 2 2211 011 1345567899999999998
Q ss_pred cccHHHHHH---HHHcCCeEEEccCCh
Q psy12817 644 NLHHHVAEF---CIQHGKNLVTASYLS 667 (1201)
Q Consensus 644 ~~h~~Vaka---cIeaGkh~VD~Syvs 667 (1201)
.....+.+. +++.+..++|.+-+.
T Consensus 77 ~~~~~v~~~l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 77 GASGAVAAEIAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHHHHHHHHHHhhCCCCCEEEeCccch
Confidence 665555543 345566777765443
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00097 Score=67.63 Aligned_cols=96 Identities=22% Similarity=0.308 Sum_probs=66.9
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC--------------H-----HHHHHHHHH----cCCeeEEEe--ecCC
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLL--------------K-----EDIDKVTNE----FGRVEATLI--DVNN 621 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~--------------~-----ekAe~La~~----~~~v~~v~l--DV~D 621 (1201)
||+|+|+|.+|..+++.|++.+--+++++|.+ . .|++.+++. .|+++.... ++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~ 80 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE 80 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence 69999999999999999999866679998865 1 133333332 345443333 3332
Q ss_pred CCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEccC
Q psy12817 622 GGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 622 ~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+...+.++++|+||+|... .....+.+.|.+.++++++...
T Consensus 81 ---~~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~~i~~~~ 122 (143)
T cd01483 81 ---DNLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIPVIDAGG 122 (143)
T ss_pred ---hhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3346778899999999854 2345677888888888888743
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00039 Score=75.51 Aligned_cols=91 Identities=16% Similarity=0.154 Sum_probs=66.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
||+++|+|+|.+|..+++.+++. +++|++++|+.+++.+.+...-+.. +. .-+..+..+.+|+|+-++|+.
T Consensus 1 m~~~~i~GtGniG~alA~~~a~a-g~eV~igs~r~~~~~~a~a~~l~~~-----i~---~~~~~dA~~~aDVVvLAVP~~ 71 (211)
T COG2085 1 MMIIAIIGTGNIGSALALRLAKA-GHEVIIGSSRGPKALAAAAAALGPL-----IT---GGSNEDAAALADVVVLAVPFE 71 (211)
T ss_pred CcEEEEeccChHHHHHHHHHHhC-CCeEEEecCCChhHHHHHHHhhccc-----cc---cCChHHHHhcCCEEEEeccHH
Confidence 78999999999999999999986 5899999666655544443321211 11 224566777899999999999
Q ss_pred ccHHHHHHHH--HcCCeEEEcc
Q psy12817 645 LHHHVAEFCI--QHGKNLVTAS 664 (1201)
Q Consensus 645 ~h~~VakacI--eaGkh~VD~S 664 (1201)
..+.+++..- -.||-+||.+
T Consensus 72 a~~~v~~~l~~~~~~KIvID~t 93 (211)
T COG2085 72 AIPDVLAELRDALGGKIVIDAT 93 (211)
T ss_pred HHHhHHHHHHHHhCCeEEEecC
Confidence 8888776554 2368888874
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00055 Score=68.93 Aligned_cols=97 Identities=22% Similarity=0.292 Sum_probs=67.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCeeE--EEeec
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRVEA--TLIDV 619 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v~~--v~lDV 619 (1201)
.+||+|+|+|.+|..+++.|++.+--+++++|.+. .|++.+++ ..|.++. ...++
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 47999999999999999999998666799887531 13433333 3355443 33334
Q ss_pred CCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 620 NNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 620 ~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
. .+...++++++|+||+|+-. .....+.+.|.+.++++++..
T Consensus 82 ~---~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 82 D---EENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp S---HHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred c---cccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 2 46788888999999999843 334567778888888888764
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00059 Score=77.64 Aligned_cols=104 Identities=18% Similarity=0.157 Sum_probs=73.3
Q ss_pred ccccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-------------------HHHHHHH----HcCCeeE
Q psy12817 558 ADIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-------------------DIDKVTN----EFGRVEA 614 (1201)
Q Consensus 558 ~~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-------------------kAe~La~----~~~~v~~ 614 (1201)
..++..+..+|+|+|+|.+|.+++.+|++.+--+++++|.+.= |++.+++ ..|.++.
T Consensus 20 e~Q~kL~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V 99 (287)
T PRK08223 20 TEQQRLRNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEI 99 (287)
T ss_pred HHHHHHhcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEE
Confidence 3344566799999999999999999999987667888875421 3333322 2254443
Q ss_pred EE--eecCCCCchHHHhhccCCcEEEEcCCCc---ccHHHHHHHHHcCCeEEEcc
Q psy12817 615 TL--IDVNNGGSDNLSGLVRSADLVVSLLPYN---LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 615 v~--lDV~D~~~e~L~elI~~~DVVIs~lP~~---~h~~VakacIeaGkh~VD~S 664 (1201)
.. ..++ .+.+.++++++|+||+|+... ....+.++|.+.++.+|..+
T Consensus 100 ~~~~~~l~---~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~~ 151 (287)
T PRK08223 100 RAFPEGIG---KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIPALTAA 151 (287)
T ss_pred EEEecccC---ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 33 3343 356788899999999999652 34667788999999888864
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00075 Score=77.67 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=64.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC------CeeE-EEeecCCCCchHHHhhccCCcEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG------RVEA-TLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~------~v~~-v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
++||+|||+|.||.+++..|++. +++|++.+|+.++++.+..... +... ..+.. .+++.+.++++|+|
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~-G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~----~~~~~e~~~~aD~V 78 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASK-GVPVRLWARRPEFAAALAAERENREYLPGVALPAELYP----TADPEEALAGADFA 78 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEE----eCCHHHHHcCCCEE
Confidence 57999999999999999999986 5789999999998888775321 1100 00111 12455667899999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 638 VSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 638 Is~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
|.|+|......+.+. ++.++.+++.+
T Consensus 79 i~~v~~~~~~~v~~~-l~~~~~vi~~~ 104 (328)
T PRK14618 79 VVAVPSKALRETLAG-LPRALGYVSCA 104 (328)
T ss_pred EEECchHHHHHHHHh-cCcCCEEEEEe
Confidence 999997754444322 34455555543
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0023 Score=62.03 Aligned_cols=107 Identities=20% Similarity=0.244 Sum_probs=76.4
Q ss_pred EEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCCcc-
Q psy12817 568 VLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPYNL- 645 (1201)
Q Consensus 568 VLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~~~- 645 (1201)
|+|+|+|.+|+.+++.|.+ .+.+|++++++++.++++... +..++..|.+| .+.++++ ++++|.||.+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~-~~~~vvvid~d~~~~~~~~~~--~~~~i~gd~~~--~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKE-GGIDVVVIDRDPERVEELREE--GVEVIYGDATD--PEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHH-TTSEEEEEESSHHHHHHHHHT--TSEEEES-TTS--HHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHh-CCCEEEEEECCcHHHHHHHhc--ccccccccchh--hhHHhhcCccccCEEEEccCCHHH
Confidence 6899999999999999999 567899999999999988765 47899999998 7777754 678999999998543
Q ss_pred cHHHHHHHHH--cCCeEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 646 HHHVAEFCIQ--HGKNLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 646 h~~VakacIe--aGkh~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
+..++..+-+ ...+++.........+. .++.|+.
T Consensus 76 n~~~~~~~r~~~~~~~ii~~~~~~~~~~~----l~~~g~d 111 (116)
T PF02254_consen 76 NLLIALLARELNPDIRIIARVNDPENAEL----LRQAGAD 111 (116)
T ss_dssp HHHHHHHHHHHTTTSEEEEEESSHHHHHH----HHHTT-S
T ss_pred HHHHHHHHHHHCCCCeEEEEECCHHHHHH----HHHCCcC
Confidence 3444455544 23456655555444333 3556654
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >COG0460 ThrA Homoserine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0012 Score=76.30 Aligned_cols=152 Identities=22% Similarity=0.268 Sum_probs=94.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCC---------CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDE---------NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS 633 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~---------~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~ 633 (1201)
+..||.|+|.|.||+.+++.|.++. +++ +.|++|+....+.+ ..+++.....|... ..........+
T Consensus 2 ~~v~v~l~G~G~VG~~~~~il~~~~~~l~~~~g~~i~v~~v~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~ 78 (333)
T COG0460 2 KTVKVGLLGLGTVGSGVLEILAEKQEELRKRAGIEIRVVAVADRDGSLVRDL--DLLNAEVWTTDGAL-SLGDEVLLDED 78 (333)
T ss_pred ceEEEEEEccCchhHHHHHHHHHhHHHHHhhcCCceEEEEEEeccchhcccc--cccchhhheecccc-cccHhhhcccc
Confidence 4579999999999999999998752 223 34667776554311 11111112222211 00011122347
Q ss_pred CcEEEEcCCCcc--cH--HHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhh
Q psy12817 634 ADLVVSLLPYNL--HH--HVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAH 707 (1201)
Q Consensus 634 ~DVVIs~lP~~~--h~--~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~ 707 (1201)
+|+|+.++|... .. ...+.++++|+|+||+. ..+..-.+|.+.|+++|+.++-|.-+.-|+==+ +.+++.-
T Consensus 79 ~dvvve~~~~d~~~~~~~~~~~~al~~GkhVVTaNK~~lA~~~~el~~~A~~~g~~l~yEAtV~gGiPiI---~~lr~~l 155 (333)
T COG0460 79 IDVVVELVGGDVEPAEPADLYLKALENGKHVVTANKALLALHYHELREAAEKNGVKLLYEATVGGGIPII---KLLRELL 155 (333)
T ss_pred CCEEEecCcccCCchhhHHHHHHHHHcCCeEECCCchHhHhhHHHHHHHHHHhCCeEEEEeeeccCcchH---HHHHhhc
Confidence 899999997632 23 77899999999999994 466667889999999999998886554443222 1223332
Q ss_pred hcCCcEEEEEeecCC
Q psy12817 708 LNGGKVESFVSYCGG 722 (1201)
Q Consensus 708 ~~ggkV~sf~s~cGG 722 (1201)
. +.+|.+|.-..-|
T Consensus 156 ~-g~~I~~i~GIlNG 169 (333)
T COG0460 156 A-GDEILSIRGILNG 169 (333)
T ss_pred c-cCceEEEEEEEec
Confidence 2 5677777654433
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00026 Score=83.64 Aligned_cols=97 Identities=19% Similarity=0.281 Sum_probs=69.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHH-hhccCCcEEEEc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLS-GLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~-elI~~~DVVIs~ 640 (1201)
.+++||+|+| +|++|+.+++.|.+++.++|+...++.+.-+.+...++.... .|+.+ .+.++ +.++++|+|+.|
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~--~~~~~--~~~~~~~~~~~~DvVf~A 111 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLIT--QDLPN--LVAVKDADFSDVDAVFCC 111 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccC--ccccc--eecCCHHHhcCCCEEEEc
Confidence 4678999999 699999999999999999988877765544444443432221 12221 11222 124789999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|.....+++.+ ++.|+.+||.|
T Consensus 112 lp~~~s~~i~~~-~~~g~~VIDlS 134 (381)
T PLN02968 112 LPHGTTQEIIKA-LPKDLKIVDLS 134 (381)
T ss_pred CCHHHHHHHHHH-HhCCCEEEEcC
Confidence 998877888887 47899999986
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00084 Score=79.03 Aligned_cols=74 Identities=19% Similarity=0.307 Sum_probs=60.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...+|+|+|+|.+|+.+++.+.+.+ .+|+++||+.++++.+...+.. .+..+..+ .+.+.+.++++|+||+|++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lG-a~V~v~d~~~~~~~~l~~~~g~--~v~~~~~~--~~~l~~~l~~aDvVI~a~~ 239 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLG-ATVTILDINIDRLRQLDAEFGG--RIHTRYSN--AYEIEDAVKRADLLIGAVL 239 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHhcCc--eeEeccCC--HHHHHHHHccCCEEEEccc
Confidence 4578999999999999999999875 5899999999998888776632 22334444 6778899999999999984
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0007 Score=75.24 Aligned_cols=102 Identities=18% Similarity=0.257 Sum_probs=70.2
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-------------------HHHHH----HHHcCCeeEEEee
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-------------------DIDKV----TNEFGRVEATLID 618 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-------------------kAe~L----a~~~~~v~~v~lD 618 (1201)
..+..||+|+|+|.+|..++.+|++.+--+++++|.+.- |++.+ .+..|.++....+
T Consensus 21 ~L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~ 100 (240)
T TIGR02355 21 ALKASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN 100 (240)
T ss_pred HHhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 355689999999999999999999987667888876432 33322 2333555543333
Q ss_pred cCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 619 VNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 619 V~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
-.= +.+.+.++++++|+||+|+-. .....+.+.|.+.++++|..+
T Consensus 101 ~~i-~~~~~~~~~~~~DlVvd~~D~~~~r~~ln~~~~~~~ip~v~~~ 146 (240)
T TIGR02355 101 AKL-DDAELAALIAEHDIVVDCTDNVEVRNQLNRQCFAAKVPLVSGA 146 (240)
T ss_pred ccC-CHHHHHHHhhcCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 211 135677888999999999843 234556788888888888754
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00095 Score=70.65 Aligned_cols=94 Identities=22% Similarity=0.264 Sum_probs=62.0
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH------------------HHHHHHHHH----cCCeeE--EEeecCCC
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK------------------EDIDKVTNE----FGRVEA--TLIDVNNG 622 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~------------------ekAe~La~~----~~~v~~--v~lDV~D~ 622 (1201)
||+|+|+|.+|..++++|++.+--+++++|.+. .|++.+++. .|.++. ....+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-- 78 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-- 78 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC--
Confidence 699999999999999999998655799998875 244433332 244443 333333
Q ss_pred CchHHHhhccCCcEEEEcCCCcc-cHHHHHHHHHc-CCeEEEc
Q psy12817 623 GSDNLSGLVRSADLVVSLLPYNL-HHHVAEFCIQH-GKNLVTA 663 (1201)
Q Consensus 623 ~~e~L~elI~~~DVVIs~lP~~~-h~~VakacIea-Gkh~VD~ 663 (1201)
.+.+.++++++|+||+|+-... ...+...|.+. ++.++..
T Consensus 79 -~~~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip~i~~ 120 (174)
T cd01487 79 -ENNLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKPVVCA 120 (174)
T ss_pred -hhhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3467788899999999974322 23345555555 5555543
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00072 Score=74.28 Aligned_cols=101 Identities=23% Similarity=0.269 Sum_probs=71.5
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHH----cCCee--EEE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNE----FGRVE--ATL 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~----~~~v~--~v~ 616 (1201)
..+..||+|+|+|.+|..+++.|++.+--+++++|.+. .|++.+++. .|.++ .+.
T Consensus 18 ~L~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 18 KLKNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HHhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 45678999999999999999999998766788886432 244443333 24443 333
Q ss_pred eecCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEccC
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~Sy 665 (1201)
.+++ .+.+.++++++|+||+|+... ....+.+.|.+.++.+++...
T Consensus 98 ~~i~---~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g~ 144 (228)
T cd00757 98 ERLD---AENAEELIAGYDLVLDCTDNFATRYLINDACVKLGKPLVSGAV 144 (228)
T ss_pred ceeC---HHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 3332 356778889999999998543 345577888889998888653
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00099 Score=77.02 Aligned_cols=77 Identities=18% Similarity=0.210 Sum_probs=59.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH----HHHHHHH-----cCCeeEEEeecCCCCchHHHhhcc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED----IDKVTNE-----FGRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek----Ae~La~~-----~~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
.++|||+|.| +|++|+.++++|.++ +.+|++.+|.... ...+... ..++..+..|+.| .+.+.++++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d--~~~l~~~~~ 89 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFL-NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK--FTDCQKACK 89 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC--HHHHHHHhh
Confidence 4579999999 799999999999987 4789888875432 1111111 1246778899998 788999999
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
++|+||++..
T Consensus 90 ~~d~ViHlAa 99 (348)
T PRK15181 90 NVDYVLHQAA 99 (348)
T ss_pred CCCEEEECcc
Confidence 9999999974
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00083 Score=76.47 Aligned_cols=75 Identities=20% Similarity=0.259 Sum_probs=55.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeE---E----EeecCCCCchHHHhhccCCcEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEA---T----LIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~---v----~lDV~D~~~e~L~elI~~~DVV 637 (1201)
|+||+|||+|.||..++..|++. +++|++.+|+.+.++++......... . ...+ ..+..+.++++|+|
T Consensus 1 mmkI~iiG~G~mG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~D~v 75 (325)
T PRK00094 1 MMKIAVLGAGSWGTALAIVLARN-GHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRA----TTDLAEALADADLI 75 (325)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEE----eCCHHHHHhCCCEE
Confidence 67999999999999999999986 57899999999988887764211000 0 0111 12355567799999
Q ss_pred EEcCCCc
Q psy12817 638 VSLLPYN 644 (1201)
Q Consensus 638 Is~lP~~ 644 (1201)
|.|+|..
T Consensus 76 i~~v~~~ 82 (325)
T PRK00094 76 LVAVPSQ 82 (325)
T ss_pred EEeCCHH
Confidence 9999864
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00099 Score=79.24 Aligned_cols=122 Identities=20% Similarity=0.325 Sum_probs=78.7
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----Ce--------eEEEeecCCCCchHHHhhcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RV--------EATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v--------~~v~lDV~D~~~e~L~elI~ 632 (1201)
|||.|||+|+||.+++..|++. +++|+++|++.++++.+.+... +. ..-.+.++ .+..++++
T Consensus 1 mkI~vIGlG~~G~~lA~~La~~-G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~----~~~~~~~~ 75 (411)
T TIGR03026 1 MKIAVIGLGYVGLPLAALLADL-GHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRAT----TDYEDAIR 75 (411)
T ss_pred CEEEEECCCchhHHHHHHHHhc-CCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEE----CCHHHHHh
Confidence 4899999999999999999976 5789999999999988765320 00 00001111 23556678
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHH
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECI 703 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~i 703 (1201)
++|+||.|+|...+. . .-.|.+++......+.+.. +.|..++...++.||...-++...+
T Consensus 76 ~advvii~vpt~~~~--------~--~~~d~~~v~~~~~~i~~~l-~~g~lvi~~STv~pgt~~~l~~~~~ 135 (411)
T TIGR03026 76 DADVIIICVPTPLKE--------D--GSPDLSYVESAAETIAKHL-RKGATVVLESTVPPGTTEEVVKPIL 135 (411)
T ss_pred hCCEEEEEeCCCCCC--------C--CCcChHHHHHHHHHHHHhc-CCCCEEEEeCcCCCCchHHHHHHHH
Confidence 999999999876541 0 1223344433333432222 4577778888899997655544433
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0013 Score=76.04 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=61.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHH--HHH---HcCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDK--VTN---EFGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~--La~---~~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.++++|+|.| +|++|+.+++.|.++ +++|++.+|+.++... +.. ..+++..+..|+.| .+.+.++++++|+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d~ 84 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLER-GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD--YEALKAAIDGCDG 84 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCC--hHHHHHHHhcCCE
Confidence 4578999999 599999999999987 5789888888664321 111 11246778899998 8889999999999
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 85 Vih~A~~ 91 (342)
T PLN02214 85 VFHTASP 91 (342)
T ss_pred EEEecCC
Confidence 9999853
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00089 Score=90.19 Aligned_cols=111 Identities=16% Similarity=0.174 Sum_probs=84.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.+||.+||.|.||.+++..|.+. +++|++.||+.++++++++. ++.. .+...++.+++|+||.|+|.
T Consensus 3 ~~~~IGfIGLG~MG~~mA~~L~~~-G~~v~v~dr~~~~~~~l~~~--Ga~~---------~~s~~e~a~~advVi~~l~~ 70 (1378)
T PLN02858 3 SAGVVGFVGLDSLSFELASSLLRS-GFKVQAFEISTPLMEKFCEL--GGHR---------CDSPAEAAKDAAALVVVLSH 70 (1378)
T ss_pred CCCeEEEEchhHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHc--CCee---------cCCHHHHHhcCCEEEEEcCC
Confidence 347899999999999999999986 58999999999999998864 3332 12466777899999999986
Q ss_pred ccc-HHHH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcC--CEEEe
Q psy12817 644 NLH-HHVA------EFCIQHGKNLVTASYLSP-EMMALHERAASAG--ITVLN 686 (1201)
Q Consensus 644 ~~h-~~Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAG--Vtil~ 686 (1201)
.-. ..+. ...++.|.-+||.|.+++ ..+++.+.++++| +.++.
T Consensus 71 ~~~v~~V~~g~~g~~~~l~~g~iivd~STi~p~~~~~la~~l~~~g~~~~~lD 123 (1378)
T PLN02858 71 PDQVDDVFFGDEGAAKGLQKGAVILIRSTILPLQLQKLEKKLTERKEQIFLVD 123 (1378)
T ss_pred hHHHHHHHhchhhHHhcCCCcCEEEECCCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 543 2232 122456888999997665 4678999999999 76553
|
|
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0017 Score=78.71 Aligned_cols=123 Identities=10% Similarity=0.167 Sum_probs=87.0
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc-
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL- 645 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~- 645 (1201)
+|.|||.|.||.+++..|++. +++|++.||+.++++++.+.+.....+ ....+ .+++.+.++++|+|+.|+|..-
T Consensus 1 ~IG~IGLG~MG~~mA~nL~~~-G~~V~v~drt~~~~~~l~~~~~~g~~~-~~~~s--~~e~v~~l~~~dvIil~v~~~~~ 76 (467)
T TIGR00873 1 DIGVIGLAVMGSNLALNMADH-GFTVSVYNRTPEKTDEFLAEHAKGKKI-VGAYS--IEEFVQSLERPRKIMLMVKAGAP 76 (467)
T ss_pred CEEEEeeHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHHHhhccCCCCc-eecCC--HHHHHhhcCCCCEEEEECCCcHH
Confidence 489999999999999999987 579999999999999988753111000 11222 4455555568999999998743
Q ss_pred cHHHHH---HHHHcCCeEEEccC-ChHHHHHHHHHHHHcCCEEEeccccCchh
Q psy12817 646 HHHVAE---FCIQHGKNLVTASY-LSPEMMALHERAASAGITVLNEVGLDPGI 694 (1201)
Q Consensus 646 h~~Vak---acIeaGkh~VD~Sy-vs~e~~eLde~AkeAGVtil~e~GlDPGI 694 (1201)
-..++. .+++.|.-++|.+- ......+..++++++|+.++ ++|+.-|.
T Consensus 77 v~~Vi~~l~~~L~~g~iIID~gns~~~~t~~~~~~l~~~gi~fv-dapVsGG~ 128 (467)
T TIGR00873 77 VDAVINQLLPLLEKGDIIIDGGNSHYPDTERRYKELKAKGILFV-GSGVSGGE 128 (467)
T ss_pred HHHHHHHHHhhCCCCCEEEECCCcCHHHHHHHHHHHHhcCCEEE-cCCCCCCH
Confidence 234433 33567888999975 44566666778889999865 56665554
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0011 Score=77.60 Aligned_cols=100 Identities=21% Similarity=0.134 Sum_probs=72.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCeeEE--E
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRVEAT--L 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v~~v--~ 616 (1201)
..+..+|+|+|+|.+|..++.+|++.+--+++++|.+. .|++.+++ ..|.++.. .
T Consensus 25 ~L~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 25 SLFDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 35678999999999999999999998766789888764 24443333 33554433 2
Q ss_pred eecCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~S 664 (1201)
..++ .+...++++++|+||+|+-.. ....+.++|.+.++.+|..+
T Consensus 105 ~~i~---~~~~~~~~~~~DvVvd~~d~~~~r~~~n~~c~~~~ip~v~~~ 150 (355)
T PRK05597 105 RRLT---WSNALDELRDADVILDGSDNFDTRHLASWAAARLGIPHVWAS 150 (355)
T ss_pred eecC---HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 3333 356677889999999998543 22456788999999988864
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0014 Score=71.58 Aligned_cols=98 Identities=22% Similarity=0.285 Sum_probs=67.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH------------------HHHHHHHHH----cCCeeE--EEee
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK------------------EDIDKVTNE----FGRVEA--TLID 618 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~------------------ekAe~La~~----~~~v~~--v~lD 618 (1201)
.+..+|+|+|+|.+|..++++|++.+--+++++|.+. .|++.+++. .|.++. +...
T Consensus 26 L~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~ 105 (212)
T PRK08644 26 LKKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEK 105 (212)
T ss_pred HhCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeee
Confidence 5678999999999999999999998666799998872 244443332 244433 3333
Q ss_pred cCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHc-CCeEEEc
Q psy12817 619 VNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQH-GKNLVTA 663 (1201)
Q Consensus 619 V~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIea-Gkh~VD~ 663 (1201)
++ .+.+.++++++|+||+|+-.. ....+...|.+. ++.++..
T Consensus 106 i~---~~~~~~~~~~~DvVI~a~D~~~~r~~l~~~~~~~~~~p~I~~ 149 (212)
T PRK08644 106 ID---EDNIEELFKDCDIVVEAFDNAETKAMLVETVLEHPGKKLVAA 149 (212)
T ss_pred cC---HHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 43 345677889999999997432 224456777777 7777764
|
|
| >PRK06928 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00085 Score=75.81 Aligned_cols=91 Identities=18% Similarity=0.233 Sum_probs=64.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC---CeEEEEeCCH-HHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN---IHITLGSLLK-EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~---~~VtVadR~~-ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
|+||+|||+|.+|..++..|.+.+. .+|.+.+|+. ++++.+...++.+.. .+ +..++++++|+||.|
T Consensus 1 m~~I~iIG~G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~-----~~----~~~e~~~~aDvVila 71 (277)
T PRK06928 1 MEKIGFIGYGSMADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVEL-----AD----NEAEIFTKCDHSFIC 71 (277)
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEE-----eC----CHHHHHhhCCEEEEe
Confidence 6799999999999999999987642 5688888864 455666555433221 11 234556789999999
Q ss_pred CCCcccHHHHHHH---HHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFC---IQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~Vakac---IeaGkh~VD~S 664 (1201)
+|.....++++.+ +..++++|...
T Consensus 72 vpp~~~~~vl~~l~~~l~~~~~ivS~~ 98 (277)
T PRK06928 72 VPPLAVLPLLKDCAPVLTPDRHVVSIA 98 (277)
T ss_pred cCHHHHHHHHHHHHhhcCCCCEEEEEC
Confidence 9987777776654 44577777763
|
|
| >PRK06407 ornithine cyclodeaminase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0004 Score=79.55 Aligned_cols=107 Identities=16% Similarity=0.162 Sum_probs=79.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++++|||+|..|+..++.+..-..+ +|.|.+|++++++++++++. +++.. + .++.++++.++|+|+.|
T Consensus 117 a~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~---~----~~~~~eav~~aDIV~ta 189 (301)
T PRK06407 117 VENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIR---P----VDNAEAALRDADTITSI 189 (301)
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEE---E----eCCHHHHHhcCCEEEEe
Confidence 47999999999999999988764344 59999999999999987763 22221 1 13578888999999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAAS 679 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~Ake 679 (1201)
+|.. ++-+-...++.|.|+.-+.-..+.+++++...-+
T Consensus 190 T~s~-~P~~~~~~l~pg~hV~aiGs~~p~~~El~~~~l~ 227 (301)
T PRK06407 190 TNSD-TPIFNRKYLGDEYHVNLAGSNYPNRREAEHSVLN 227 (301)
T ss_pred cCCC-CcEecHHHcCCCceEEecCCCCCCcccCCHHHHH
Confidence 9854 3333345678999988886555677777765433
|
|
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00086 Score=75.78 Aligned_cols=89 Identities=16% Similarity=0.259 Sum_probs=63.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC---CCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE---NIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~---~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+||++||+|.||.+++..|.+.+ ..+|++.+|+.++++.+.+.+ ++.. .. ...++++++|+||-|+
T Consensus 2 ~~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~-g~~~----~~-----~~~e~~~~aDiIiLav 71 (272)
T PRK12491 2 NKQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKY-GITI----TT-----NNNEVANSADILILSI 71 (272)
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhc-CcEE----eC-----CcHHHHhhCCEEEEEe
Confidence 358999999999999999998764 236999999999998887666 3432 11 2334567899999999
Q ss_pred CCcccHHHHHHH---HHcCCeEEEc
Q psy12817 642 PYNLHHHVAEFC---IQHGKNLVTA 663 (1201)
Q Consensus 642 P~~~h~~Vakac---IeaGkh~VD~ 663 (1201)
|+..-..+++.. ++.++.++++
T Consensus 72 kP~~~~~vl~~l~~~~~~~~lvISi 96 (272)
T PRK12491 72 KPDLYSSVINQIKDQIKNDVIVVTI 96 (272)
T ss_pred ChHHHHHHHHHHHHhhcCCcEEEEe
Confidence 865444544432 3344556665
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00095 Score=74.38 Aligned_cols=102 Identities=19% Similarity=0.282 Sum_probs=69.8
Q ss_pred ccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHH----HHcCCeeEEE
Q psy12817 560 IQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVT----NEFGRVEATL 616 (1201)
Q Consensus 560 ~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La----~~~~~v~~v~ 616 (1201)
++..+..||+|+|+|.+|..++++|++.+--+++++|.+. .|++.++ +..|.++...
T Consensus 27 Q~~L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~ 106 (245)
T PRK05690 27 QEKLKAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET 106 (245)
T ss_pred HHHhcCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence 3346678999999999999999999998766788887542 1333322 2235444333
Q ss_pred ee--cCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 617 ID--VNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lD--V~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
.+ +. .+.+.++++++|+||+|+-. .....+.+.|.++++.+|..+
T Consensus 107 ~~~~i~---~~~~~~~~~~~DiVi~~~D~~~~r~~ln~~~~~~~ip~v~~~ 154 (245)
T PRK05690 107 INARLD---DDELAALIAGHDLVLDCTDNVATRNQLNRACFAAKKPLVSGA 154 (245)
T ss_pred EeccCC---HHHHHHHHhcCCEEEecCCCHHHHHHHHHHHHHhCCEEEEee
Confidence 22 22 34567788999999999843 233456778888888888754
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.001 Score=83.72 Aligned_cols=77 Identities=22% Similarity=0.357 Sum_probs=61.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchH-HHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDN-LSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~-L~elI~~~DVVIs~ 640 (1201)
..+|||+|.| +|++|+.+++.|.+..+++|++.+|.......+.. .++++.+..|+.| .+. +.++++++|+||+|
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~-~~~~~~~~gDl~d--~~~~l~~~l~~~D~ViHl 389 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG-HPRFHFVEGDISI--HSEWIEYHIKKCDVVLPL 389 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC-CCceEEEeccccC--cHHHHHHHhcCCCEEEEC
Confidence 5689999999 79999999999998767899999998765443322 2357888899987 444 67788899999998
Q ss_pred CC
Q psy12817 641 LP 642 (1201)
Q Consensus 641 lP 642 (1201)
..
T Consensus 390 Aa 391 (660)
T PRK08125 390 VA 391 (660)
T ss_pred cc
Confidence 63
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0008 Score=73.73 Aligned_cols=76 Identities=11% Similarity=0.195 Sum_probs=63.4
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhcc--------C
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVR--------S 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~--------~ 633 (1201)
||+++|.| +|.+|+.+++.|++. +.+|++.+|+.+.++++....+ ++..+.+|+.| .+++.++++ +
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGR 77 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 68899999 799999999999987 5789999999999888877653 57788999998 777777655 3
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 78 id~vi~~ag~ 87 (260)
T PRK08267 78 LDVLFNNAGI 87 (260)
T ss_pred CCEEEECCCC
Confidence 5999999853
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00091 Score=78.81 Aligned_cols=103 Identities=20% Similarity=0.188 Sum_probs=74.2
Q ss_pred cccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC-------------------HHHHHHHHHH----cCCee--
Q psy12817 559 DIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL-------------------KEDIDKVTNE----FGRVE-- 613 (1201)
Q Consensus 559 ~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~-------------------~ekAe~La~~----~~~v~-- 613 (1201)
.++..+..+|+|+|+|.+|..++.+|++.+--+++++|.+ ..|++.+++. .|+++
T Consensus 35 ~q~~l~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~ 114 (370)
T PRK05600 35 QQERLHNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVN 114 (370)
T ss_pred HHHHhcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeE
Confidence 3345667899999999999999999999876689988876 2344444433 25443
Q ss_pred EEEeecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 614 ATLIDVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 614 ~v~lDV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
+....++ .+.+.++++++|+||+|+-. .....+.+.|.+.++.+|..+
T Consensus 115 ~~~~~i~---~~~~~~~~~~~DlVid~~Dn~~~r~~in~~~~~~~iP~v~~~ 163 (370)
T PRK05600 115 ALRERLT---AENAVELLNGVDLVLDGSDSFATKFLVADAAEITGTPLVWGT 163 (370)
T ss_pred EeeeecC---HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 3333333 35677889999999999854 333556788999999988864
|
|
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0027 Score=69.65 Aligned_cols=147 Identities=18% Similarity=0.192 Sum_probs=93.2
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH----------HHHHHHHHHcCCeeEE-EeecCCCCchHHHhh
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK----------EDIDKVTNEFGRVEAT-LIDVNNGGSDNLSGL 630 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~----------ekAe~La~~~~~v~~v-~lDV~D~~~e~L~el 630 (1201)
+.+.++|+|.|.|.||+.+++.|.+.+...|.|.|.+. +..+...... ++... ..|..+ .+.+-..
T Consensus 20 ~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~-~~~~~~~~~~~~--~~~l~~~ 96 (217)
T cd05211 20 SLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG-GSARVKVQDYFP--GEAILGL 96 (217)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC-CccccCcccccC--cccceec
Confidence 35679999999999999999999998655688888877 5555443332 22211 112222 2344332
Q ss_pred ccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHh
Q psy12817 631 VRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 631 I~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei 706 (1201)
++|++|-|.+. ..+...++ +.++.+|...- .+++ -++.-+++|+.+++ |.+
T Consensus 97 --~~DVlipaA~~~~i~~~~a~---~l~a~~V~e~AN~p~t~~---a~~~L~~~Gi~v~P-----------------d~~ 151 (217)
T cd05211 97 --DVDIFAPCALGNVIDLENAK---KLKAKVVAEGANNPTTDE---ALRILHERGIVVAP-----------------DIV 151 (217)
T ss_pred --cccEEeeccccCccChhhHh---hcCccEEEeCCCCCCCHH---HHHHHHHCCcEEEC-----------------hHH
Confidence 89999999853 44544443 45677887653 4443 34456888999987 223
Q ss_pred hhcCCcEEEEEeecCCCCCCCCCCCccccccccChHHHHHH
Q psy12817 707 HLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLN 747 (1201)
Q Consensus 707 ~~~ggkV~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a 747 (1201)
-..||-+.++.-|.+... .+.|+.+.+...
T Consensus 152 ~NaGGvi~s~~E~~q~~~-----------~~~w~~~~v~~~ 181 (217)
T cd05211 152 ANAGGVIVSYFEWVQNLQ-----------RLSWDAEEVRSK 181 (217)
T ss_pred hcCCCeEeEHHHhcCCcc-----------ccCCCHHHHHHH
Confidence 335677776666665442 257888766533
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0019 Score=68.37 Aligned_cols=96 Identities=10% Similarity=0.156 Sum_probs=69.3
Q ss_pred CccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccc
Q psy12817 191 KSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLY 270 (1201)
Q Consensus 191 ~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y 270 (1201)
.++.-.+|.|+|.|++|+...+.++.+| .+|.+|+........... .+-.+.
T Consensus 32 ~~l~g~tvgIiG~G~IG~~vA~~l~~fG----------------~~V~~~d~~~~~~~~~~~-~~~~~~----------- 83 (178)
T PF02826_consen 32 RELRGKTVGIIGYGRIGRAVARRLKAFG----------------MRVIGYDRSPKPEEGADE-FGVEYV----------- 83 (178)
T ss_dssp S-STTSEEEEESTSHHHHHHHHHHHHTT-----------------EEEEEESSCHHHHHHHH-TTEEES-----------
T ss_pred cccCCCEEEEEEEcCCcCeEeeeeecCC----------------ceeEEecccCChhhhccc-ccceee-----------
Confidence 4677899999999999999999999999 446667655444331111 121111
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
.+ +++++.+|+|+++.--.+.+-.+|+++.++. ||+| ++++.++
T Consensus 84 --~l-~ell~~aDiv~~~~plt~~T~~li~~~~l~~-mk~g------------------a~lvN~a 127 (178)
T PF02826_consen 84 --SL-DELLAQADIVSLHLPLTPETRGLINAEFLAK-MKPG------------------AVLVNVA 127 (178)
T ss_dssp --SH-HHHHHH-SEEEE-SSSSTTTTTSBSHHHHHT-STTT------------------EEEEESS
T ss_pred --eh-hhhcchhhhhhhhhccccccceeeeeeeeec-cccc------------------eEEEecc
Confidence 11 2467789999999988778889999999999 9999 8999876
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0014 Score=88.35 Aligned_cols=111 Identities=16% Similarity=0.275 Sum_probs=84.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.+++|.+||.|.||.+++..|++. +++|++.||+.++++++... ++.. + +...++++++|+||.|+|.
T Consensus 323 ~~~~IGfIGlG~MG~~mA~~L~~~-G~~V~v~dr~~~~~~~l~~~--Ga~~----~-----~s~~e~~~~aDvVi~~V~~ 390 (1378)
T PLN02858 323 PVKRIGFIGLGAMGFGMASHLLKS-NFSVCGYDVYKPTLVRFENA--GGLA----G-----NSPAEVAKDVDVLVIMVAN 390 (1378)
T ss_pred CCCeEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--CCee----c-----CCHHHHHhcCCEEEEecCC
Confidence 468999999999999999999986 57999999999999887754 2221 1 1345677899999999985
Q ss_pred ccc-HHHH------HHHHHcCCeEEEccCChHH-HHHHHHHHHH--cCCEEEe
Q psy12817 644 NLH-HHVA------EFCIQHGKNLVTASYLSPE-MMALHERAAS--AGITVLN 686 (1201)
Q Consensus 644 ~~h-~~Va------kacIeaGkh~VD~Syvs~e-~~eLde~Ake--AGVtil~ 686 (1201)
... ..++ ...++.|.-+||.|.+++. .+++.+.+++ .|+.++.
T Consensus 391 ~~~v~~Vl~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lD 443 (1378)
T PLN02858 391 EVQAENVLFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVD 443 (1378)
T ss_pred hHHHHHHHhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEE
Confidence 432 2332 1224678899999987665 5778888888 8888764
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0016 Score=77.57 Aligned_cols=90 Identities=19% Similarity=0.289 Sum_probs=71.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~~ 644 (1201)
|+|+|+|+|.+|+.+++.|.+. +.+|++.++++++++.+.... ++..+..|.++ .+.+.++ ++++|.||.+++..
T Consensus 1 m~viIiG~G~ig~~~a~~L~~~-g~~v~vid~~~~~~~~~~~~~-~~~~~~gd~~~--~~~l~~~~~~~a~~vi~~~~~~ 76 (453)
T PRK09496 1 MKIIIVGAGQVGYTLAENLSGE-NNDVTVIDTDEERLRRLQDRL-DVRTVVGNGSS--PDVLREAGAEDADLLIAVTDSD 76 (453)
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHhhc-CEEEEEeCCCC--HHHHHHcCCCcCCEEEEecCCh
Confidence 5899999999999999999876 578999999999988876533 57888899987 7788887 88999999999864
Q ss_pred c-cHHHHHHHHHc-CCe
Q psy12817 645 L-HHHVAEFCIQH-GKN 659 (1201)
Q Consensus 645 ~-h~~VakacIea-Gkh 659 (1201)
. +..++..|-+. +..
T Consensus 77 ~~n~~~~~~~r~~~~~~ 93 (453)
T PRK09496 77 ETNMVACQIAKSLFGAP 93 (453)
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 3 34455555554 443
|
|
| >PRK07589 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00045 Score=80.66 Aligned_cols=108 Identities=15% Similarity=0.151 Sum_probs=79.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
..+++|||+|..++..++.+.. ++-.+|.|.+|++++++++++++. +++.. +. +.++++++++|+|+.|+
T Consensus 129 a~~l~iiGaG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~---~~----~~~~~av~~ADIIvtaT 201 (346)
T PRK07589 129 SRTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIV---AC----RSVAEAVEGADIITTVT 201 (346)
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEE---Ee----CCHHHHHhcCCEEEEec
Confidence 4789999999999999987765 344469999999999999988764 22222 22 35788889999999999
Q ss_pred CCccc-HHHHHHHHHcCCeEEEccCChHHHHHHHHHHHH
Q psy12817 642 PYNLH-HHVAEFCIQHGKNLVTASYLSPEMMALHERAAS 679 (1201)
Q Consensus 642 P~~~h-~~VakacIeaGkh~VD~Syvs~e~~eLde~Ake 679 (1201)
|..-. +-+-...++.|+|+.-+.-..+.++|++.+.-+
T Consensus 202 ~S~~~~Pvl~~~~lkpG~hV~aIGs~~p~~~Eld~~~l~ 240 (346)
T PRK07589 202 ADKTNATILTDDMVEPGMHINAVGGDCPGKTELHPDILR 240 (346)
T ss_pred CCCCCCceecHHHcCCCcEEEecCCCCCCcccCCHHHHh
Confidence 74332 223346789999988886666777777665433
|
|
| >COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.002 Score=72.27 Aligned_cols=132 Identities=21% Similarity=0.173 Sum_probs=86.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC-C
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL-P 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l-P 642 (1201)
.++|+++|.|.+|...++.|..+++++++ +.+++.++.-+=..++.+..-.-+-+++ +.+..-+. -..+++.+.+ |
T Consensus 2 ~~~vvqyGtG~vGv~air~l~akpe~elvgawv~s~ak~Gkdlgelagl~dlgV~a~~-~~~avlAt-l~~~~~y~~~~~ 79 (350)
T COG3804 2 SLRVVQYGTGSVGVAAIRGLLAKPELELVGAWVHSAAKSGKDLGELAGLPDLGVIATN-SIDAVLAT-LADAVIYAPLLP 79 (350)
T ss_pred CceeEEeccchHHHHHHHHHHcCCCCceEEEEecCcccccccHHHhcCCCCceeEeec-ccccceec-cccceeeecccc
Confidence 36899999999999999999999899854 5677766543222222111100111111 01111111 1234455544 4
Q ss_pred CcccHHHHHHHHHcCCeEEEcc--------CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHH
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS--------YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAME 701 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S--------yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~ 701 (1201)
. ..-.+.|+++|+|+|+.. |.++...+.++.|+++|..-+.+.|.+||+.+-+...
T Consensus 80 --~-~~~y~rlL~aGiNVv~~g~~l~yPw~~~PelaeKpl~lAaraGn~Tl~gtGI~pGF~~dllpm 143 (350)
T COG3804 80 --S-VDEYARLLRAGINVVTPGPVLQYPWFYPPELAEKPLELAARAGNATLHGTGIGPGFVTDLLPM 143 (350)
T ss_pred --h-HHHHHHHHHcCCceeccCccccCCCcCChHHhhchHHHHHhcCCceEEecccCccHHHHHHHH
Confidence 2 556789999999999972 2566677788999999997778999999998766543
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0021 Score=70.99 Aligned_cols=100 Identities=15% Similarity=0.255 Sum_probs=62.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHH------------------------HHHHcCCeeEE--
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDK------------------------VTNEFGRVEAT-- 615 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~------------------------La~~~~~v~~v-- 615 (1201)
..+..+|+|+|+|.+|..++.+|++.+--+++++|.+.-+... +.+..|.+...
T Consensus 24 ~L~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~ 103 (231)
T PRK08328 24 KLKKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF 103 (231)
T ss_pred HHhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 3557899999999999999999999876679999855321111 11112333322
Q ss_pred EeecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 616 LIDVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 616 ~lDV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
...+. .+.+.++++++|+||+|+-. .....+.+.|.+.|++++..+
T Consensus 104 ~~~~~---~~~~~~~l~~~D~Vid~~d~~~~r~~l~~~~~~~~ip~i~g~ 150 (231)
T PRK08328 104 VGRLS---EENIDEVLKGVDVIVDCLDNFETRYLLDDYAHKKGIPLVHGA 150 (231)
T ss_pred eccCC---HHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 22222 34566677788888888733 222345556777777777643
|
|
| >PRK06823 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00076 Score=77.84 Aligned_cols=114 Identities=14% Similarity=0.174 Sum_probs=82.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..++++|||+|..++..++.+..- +--+|.|.+|++++++++++... ++... +. ++.+++++++|+|+.|
T Consensus 127 d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~---~~----~~~~~av~~ADIV~ta 199 (315)
T PRK06823 127 HVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVN---TT----LDAAEVAHAANLIVTT 199 (315)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEE---EE----CCHHHHhcCCCEEEEe
Confidence 357999999999999999988764 33459999999999999887653 22221 12 2567888999999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHH-cCCEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAAS-AGITVL 685 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~Ake-AGVtil 685 (1201)
+|.. .+-+-...++.|.|+.-+.-..+.+++++.+.-+ +...++
T Consensus 200 T~s~-~P~~~~~~l~~G~hi~~iGs~~p~~~Eld~~~l~~a~~vvv 244 (315)
T PRK06823 200 TPSR-EPLLQAEDIQPGTHITAVGADSPGKQELDAELVARADKILV 244 (315)
T ss_pred cCCC-CceeCHHHcCCCcEEEecCCCCcccccCCHHHHhhCCEEEE
Confidence 9744 2333345688999999987666788888765444 334443
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0015 Score=77.55 Aligned_cols=117 Identities=13% Similarity=0.193 Sum_probs=79.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----Ce------eEEEeecCCCCchHHHhhccCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RV------EATLIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v------~~v~lDV~D~~~e~L~elI~~~ 634 (1201)
|||.|+|+|+||.+++..++. +++|+++|+++++++++.+... ++ ....+-. ..+..+.++++
T Consensus 1 mkI~VIGlGyvGl~~A~~lA~--G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~----t~~~~~~~~~a 74 (388)
T PRK15057 1 MKITISGTGYVGLSNGLLIAQ--NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNA----TLDKNEAYRDA 74 (388)
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEE----ecchhhhhcCC
Confidence 489999999999999976663 5889999999999998876321 00 0001111 11244556789
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHH
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLA 699 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA 699 (1201)
|+||.|+|.... .+....|++++....+.+.+ . +.|.+++.+.-+.||...-++
T Consensus 75 d~vii~Vpt~~~---------~k~~~~dl~~v~~v~~~i~~-~-~~g~lVV~~STv~pgtt~~l~ 128 (388)
T PRK15057 75 DYVIIATPTDYD---------PKTNYFNTSSVESVIKDVVE-I-NPYAVMVIKSTVPVGFTAAMH 128 (388)
T ss_pred CEEEEeCCCCCc---------cCCCCcChHHHHHHHHHHHh-c-CCCCEEEEeeecCCchHHHHH
Confidence 999999987642 22234566666555556644 3 668888888889998765444
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0028 Score=76.25 Aligned_cols=90 Identities=17% Similarity=0.316 Sum_probs=66.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||+|+| +|.+|..++..|.+. +++|++.+|+.+++++++..+ ++. +. ....+.+.++|+||.|+|..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~-G~~V~v~~r~~~~~~~~a~~~-gv~-----~~----~~~~e~~~~aDvVIlavp~~ 69 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEK-GFEVIVTGRDPKKGKEVAKEL-GVE-----YA----NDNIDAAKDADIVIISVPIN 69 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHc-CCe-----ec----cCHHHHhccCCEEEEecCHH
Confidence 5899998 899999999999876 468999999998877777665 332 12 23556678899999999976
Q ss_pred ccHHHHHHH---HHcCCeEEEccCC
Q psy12817 645 LHHHVAEFC---IQHGKNLVTASYL 666 (1201)
Q Consensus 645 ~h~~Vakac---IeaGkh~VD~Syv 666 (1201)
....+++.. +..++-++|.+-+
T Consensus 70 ~~~~vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 70 VTEDVIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred HHHHHHHHHHhhCCCCCEEEEcccc
Confidence 545555443 3456677887654
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0021 Score=72.51 Aligned_cols=93 Identities=16% Similarity=0.256 Sum_probs=65.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCC---CCeEEEEeCCH-HHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDE---NIHITLGSLLK-EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~---~~~VtVadR~~-ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+||++||+|.||.+++..|.+.+ ..+|++.+|+. ++++.++..+ ++.. .+ ...++++++|+||.|+
T Consensus 4 mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~-g~~~-----~~----~~~e~~~~aDvVilav 73 (279)
T PRK07679 4 QNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKY-GVKG-----TH----NKKELLTDANILFLAM 73 (279)
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhc-CceE-----eC----CHHHHHhcCCEEEEEe
Confidence 58999999999999999998764 35789999976 4677777665 3432 12 2345567899999999
Q ss_pred CCcccHHHHHHH---HHcCCeEEEc-cCChH
Q psy12817 642 PYNLHHHVAEFC---IQHGKNLVTA-SYLSP 668 (1201)
Q Consensus 642 P~~~h~~Vakac---IeaGkh~VD~-Syvs~ 668 (1201)
|+.....++... ++.++.+|++ +-++.
T Consensus 74 ~p~~~~~vl~~l~~~~~~~~liIs~~aGi~~ 104 (279)
T PRK07679 74 KPKDVAEALIPFKEYIHNNQLIISLLAGVST 104 (279)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEECCCCCH
Confidence 876555544432 3456677775 44443
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0013 Score=74.11 Aligned_cols=72 Identities=17% Similarity=0.220 Sum_probs=60.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|+|+|.| +|++|+.+++.|.+. +++|++.+|+.++...+.. .++..+..|+.| .+.+.++++++|+||++.+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~~--~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ-GEEVRVLVRPTSDRRNLEG--LDVEIVEGDLRD--PASLRKAVAGCRALFHVAA 73 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC-CCEEEEEEecCcccccccc--CCceEEEeeCCC--HHHHHHHHhCCCEEEEece
Confidence 4799999 699999999999987 5789999998776544321 257888999998 8899999999999999974
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00074 Score=75.36 Aligned_cols=69 Identities=14% Similarity=0.169 Sum_probs=57.2
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc------cC-CcEEE
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV------RS-ADLVV 638 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI------~~-~DVVI 638 (1201)
+|+|+| +|++|+.++++|.+. +++|++.+|+++++.. ++++.+..|+.| .+.+.+++ ++ +|.|+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~-g~~V~~~~R~~~~~~~-----~~~~~~~~d~~d--~~~l~~a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA-SVPFLVASRSSSSSAG-----PNEKHVKFDWLD--EDTWDNPFSSDDGMEPEISAVY 72 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC-CCcEEEEeCCCccccC-----CCCccccccCCC--HHHHHHHHhcccCcCCceeEEE
Confidence 589999 699999999999886 5789999999876531 356777889998 88898887 56 89999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
.+.|.
T Consensus 73 ~~~~~ 77 (285)
T TIGR03649 73 LVAPP 77 (285)
T ss_pred EeCCC
Confidence 88874
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00055 Score=69.26 Aligned_cols=90 Identities=26% Similarity=0.281 Sum_probs=56.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
..+||.|||+|++|..++..|.+.+ ++| .+.+|+.+.+++++..++.... ..+.+.++++|+|+.++|
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag-~~v~~v~srs~~sa~~a~~~~~~~~~----------~~~~~~~~~aDlv~iavp 77 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAG-HEVVGVYSRSPASAERAAAFIGAGAI----------LDLEEILRDADLVFIAVP 77 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTT-SEEEEESSCHH-HHHHHHC--TT---------------TTGGGCC-SEEEE-S-
T ss_pred CccEEEEECCCHHHHHHHHHHHHCC-CeEEEEEeCCcccccccccccccccc----------cccccccccCCEEEEEec
Confidence 4689999999999999999999874 665 4678999888888877654332 234566789999999999
Q ss_pred CcccHHHHHHHHH-----cCCeEEEcc
Q psy12817 643 YNLHHHVAEFCIQ-----HGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~VakacIe-----aGkh~VD~S 664 (1201)
...=.++++.-.. .|+-++-+|
T Consensus 78 DdaI~~va~~La~~~~~~~g~iVvHtS 104 (127)
T PF10727_consen 78 DDAIAEVAEQLAQYGAWRPGQIVVHTS 104 (127)
T ss_dssp CCHHHHHHHHHHCC--S-TT-EEEES-
T ss_pred hHHHHHHHHHHHHhccCCCCcEEEECC
Confidence 8755555554433 355566655
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0059 Score=69.10 Aligned_cols=100 Identities=18% Similarity=0.185 Sum_probs=64.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCeeEEEee
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRVEATLID 618 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v~~v~lD 618 (1201)
..+..+|+|+|+|.+|..+++.|++.+--+++++|.+. .+++.+++ -.|.++....+
T Consensus 27 kL~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~ 106 (268)
T PRK15116 27 LFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD 106 (268)
T ss_pred HhcCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence 35678999999999999999999998756788888651 13333333 23444433332
Q ss_pred c-CCCCchHHHhhcc-CCcEEEEcCCC-cccHHHHHHHHHcCCeEEEc
Q psy12817 619 V-NNGGSDNLSGLVR-SADLVVSLLPY-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 619 V-~D~~~e~L~elI~-~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~ 663 (1201)
- .+ ++...+++. ++|+||+|+-. .....+.+.|.+.++.++..
T Consensus 107 ~~i~--~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~ 152 (268)
T PRK15116 107 DFIT--PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTT 152 (268)
T ss_pred cccC--hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 1 12 345666664 68888888743 22345666676766666654
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0017 Score=74.97 Aligned_cols=77 Identities=13% Similarity=0.188 Sum_probs=63.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+.++|+|.| +|++|+.++++|+++ +++|++.+|+.++.+.+...+ ++++.+..|+.| .+.+.++++++|+||+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~Vih 85 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQR-GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQE--EGSFDEAVKGCDGVFH 85 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCC--HHHHHHHHcCCCEEEE
Confidence 457999999 799999999999987 578888899887766554433 357788899998 7889999999999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 86 ~A~~ 89 (353)
T PLN02896 86 VAAS 89 (353)
T ss_pred CCcc
Confidence 9853
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0031 Score=70.62 Aligned_cols=121 Identities=17% Similarity=0.266 Sum_probs=81.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEE-EEeCCHHH-----HHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHIT-LGSLLKED-----IDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~Vt-VadR~~ek-----Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
+|+||+|.| +|+||+.+++.+.+.+++++. ..+|.... +.+++ +.....+-+.+ ++.....++|+
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~----g~~~~gv~v~~----~~~~~~~~~DV 72 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELA----GLGLLGVPVTD----DLLLVKADADV 72 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhc----cccccCceeec----chhhcccCCCE
Confidence 478999999 599999999999999988854 55665432 22222 12222223343 24455568999
Q ss_pred EEEcCCCcccHHHHHHHHHcCCeEEE-c-cCChHHHHHHHHHHHHcCCEEEeccccCchh
Q psy12817 637 VVSLLPYNLHHHVAEFCIQHGKNLVT-A-SYLSPEMMALHERAASAGITVLNEVGLDPGI 694 (1201)
Q Consensus 637 VIs~lP~~~h~~VakacIeaGkh~VD-~-Syvs~e~~eLde~AkeAGVtil~e~GlDPGI 694 (1201)
+|+-+-+....+.++.|++++++.|- + .+..++.+.|.+.+++.++.+ .--|.-|+
T Consensus 73 ~IDFT~P~~~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~~v~vv~--a~NfSiGv 130 (266)
T COG0289 73 LIDFTTPEATLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAEKVPVVI--APNFSLGV 130 (266)
T ss_pred EEECCCchhhHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHhhCCEEE--eccchHHH
Confidence 99998556668889999999987554 4 356667777888888844444 44444454
|
|
| >PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline [] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00014 Score=83.66 Aligned_cols=113 Identities=19% Similarity=0.210 Sum_probs=70.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcCC--eeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFGR--VEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~~--v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
..+++|||+|..|+..++.+.. ++--+|.|.+|++++++++++.+.. +.... .++.+++++++|+|+.|+
T Consensus 128 ~~~l~viGaG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~-------~~~~~~av~~aDii~taT 200 (313)
T PF02423_consen 128 ARTLGVIGAGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVA-------VDSAEEAVRGADIIVTAT 200 (313)
T ss_dssp --EEEEE--SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEE-------ESSHHHHHTTSSEEEE--
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcccccccee-------ccchhhhcccCCEEEEcc
Confidence 4699999999999999998876 4544699999999999999987643 22221 235788899999999999
Q ss_pred CCccc-HHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEE
Q psy12817 642 PYNLH-HHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITV 684 (1201)
Q Consensus 642 P~~~h-~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVti 684 (1201)
|.... +-+-...++.|+|+..+....+.+++|+...-+.-..+
T Consensus 201 ~s~~~~P~~~~~~l~~g~hi~~iGs~~~~~~El~~~~~~~a~~~ 244 (313)
T PF02423_consen 201 PSTTPAPVFDAEWLKPGTHINAIGSYTPGMRELDDELLKRADIV 244 (313)
T ss_dssp --SSEEESB-GGGS-TT-EEEE-S-SSTTBESB-HHHHHCSEEE
T ss_pred CCCCCCccccHHHcCCCcEEEEecCCCCchhhcCHHHhccCCEE
Confidence 86542 33334578899999998766666777766554443333
|
The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0039 Score=74.42 Aligned_cols=116 Identities=14% Similarity=0.184 Sum_probs=83.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHH-hhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLS-GLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~-elI~~~DVVIs~l 641 (1201)
..+++|+|+|+|.+|+.+++.|.+. +.+|+++++++++.+++.+.++++..+..|.++ .+.|. .-++++|+||.++
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~-~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~--~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKE-GYSVKLIERDPERAEELAEELPNTLVLHGDGTD--QELLEEEGIDEADAFIALT 305 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHCCCCeEEECCCCC--HHHHHhcCCccCCEEEECC
Confidence 4579999999999999999999875 578999999999999888776677888899988 77775 4467899999999
Q ss_pred CCc-ccHHHHHHHHHcCCe-EEEccCChHHHHHHHHHHHHcCCEEE
Q psy12817 642 PYN-LHHHVAEFCIQHGKN-LVTASYLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 642 P~~-~h~~VakacIeaGkh-~VD~Syvs~e~~eLde~AkeAGVtil 685 (1201)
+.. .+..++..|-+.+.. ++-....... .+..+..|+..+
T Consensus 306 ~~~~~n~~~~~~~~~~~~~~ii~~~~~~~~----~~~~~~~g~~~v 347 (453)
T PRK09496 306 NDDEANILSSLLAKRLGAKKVIALVNRPAY----VDLVEGLGIDIA 347 (453)
T ss_pred CCcHHHHHHHHHHHHhCCCeEEEEECCcch----HHHHHhcCCCEE
Confidence 854 334444455555543 3333332222 233566777544
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0025 Score=76.19 Aligned_cols=114 Identities=13% Similarity=0.199 Sum_probs=71.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh--------------
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-------------- 630 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-------------- 630 (1201)
++||.|||+|+||.+++..|++. +++|++.|+++++++.+.... .. +.+ ..+.++
T Consensus 3 ~~kI~VIGlG~~G~~~A~~La~~-G~~V~~~D~~~~~v~~l~~g~--~~-----~~e---~~l~~~l~~~~~~g~l~~~~ 71 (415)
T PRK11064 3 FETISVIGLGYIGLPTAAAFASR-QKQVIGVDINQHAVDTINRGE--IH-----IVE---PDLDMVVKTAVEGGYLRATT 71 (415)
T ss_pred ccEEEEECcchhhHHHHHHHHhC-CCEEEEEeCCHHHHHHHHCCC--CC-----cCC---CCHHHHHHHHhhcCceeeec
Confidence 58999999999999999999987 589999999999998865422 11 111 111111
Q ss_pred -ccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 631 -VRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 631 -I~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
++++|+||.|+|...... .-.|.+++....+.+.+. -+.|..++.+....||-..-++.
T Consensus 72 ~~~~aDvvii~vptp~~~~----------~~~dl~~v~~~~~~i~~~-l~~g~iVI~~STv~pgtt~~~~~ 131 (415)
T PRK11064 72 TPEPADAFLIAVPTPFKGD----------HEPDLTYVEAAAKSIAPV-LKKGDLVILESTSPVGATEQMAE 131 (415)
T ss_pred ccccCCEEEEEcCCCCCCC----------CCcChHHHHHHHHHHHHh-CCCCCEEEEeCCCCCCHHHHHHH
Confidence 247999999998753100 011222222222333222 24567777777777876655544
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0017 Score=75.03 Aligned_cols=97 Identities=19% Similarity=0.279 Sum_probs=73.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHH--HHHHc----CCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDK--VTNEF----GRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~--La~~~----~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.+++|+|-| +|+||+.+++.|+.+ +++|...-|++++-+. ....+ ++.+.+..|+.| .+++.+.+++||.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r-GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d--~~sf~~ai~gcdg 81 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR-GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLD--EGSFDKAIDGCDG 81 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC-CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccc--cchHHHHHhCCCE
Confidence 578999999 699999999999987 5889888898887433 12233 247788899998 8999999999999
Q ss_pred EEEcC-CCccc----------------HHHHHHHHHcC--CeEEEc
Q psy12817 637 VVSLL-PYNLH----------------HHVAEFCIQHG--KNLVTA 663 (1201)
Q Consensus 637 VIs~l-P~~~h----------------~~VakacIeaG--kh~VD~ 663 (1201)
|+.+. |..+. ..|.++|.+.+ +.+|-+
T Consensus 82 VfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~T 127 (327)
T KOG1502|consen 82 VFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYT 127 (327)
T ss_pred EEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEe
Confidence 99997 54331 12567777777 444433
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0048 Score=68.42 Aligned_cols=98 Identities=17% Similarity=0.244 Sum_probs=60.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHH----cCCeeEEEee-
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNE----FGRVEATLID- 618 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~----~~~v~~v~lD- 618 (1201)
.+..+|+|+|+|.+|..+++.|++.+--+++++|.+. .|++.+++. .|.++....+
T Consensus 9 L~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~ 88 (231)
T cd00755 9 LRNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE 88 (231)
T ss_pred HhCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence 4568999999999999999999998766799888653 133333332 2444332222
Q ss_pred -cCCCCchHHHhhcc-CCcEEEEcCCC-cccHHHHHHHHHcCCeEEEc
Q psy12817 619 -VNNGGSDNLSGLVR-SADLVVSLLPY-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 619 -V~D~~~e~L~elI~-~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~ 663 (1201)
+. ++...+++. ++|+||+|+-. .....+.+.|.+.++.++..
T Consensus 89 ~i~---~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s 133 (231)
T cd00755 89 FLT---PDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISS 133 (231)
T ss_pred ecC---HhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 22 244555553 58888888632 12233555555555555543
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0011 Score=77.09 Aligned_cols=91 Identities=16% Similarity=0.162 Sum_probs=67.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
|+||+|+| +|++|+.+++.|.+ .+..++....+..+..+.+. +.+......|+.+ . .++++|+||.|+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~~g~~i~v~d~~~---~----~~~~vDvVf~A~ 71 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--FKGKELKVEDLTT---F----DFSGVDIALFSA 71 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--eCCceeEEeeCCH---H----HHcCCCEEEECC
Confidence 57999999 79999999999988 45567776666544444332 2233334444432 1 235899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEcc
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~S 664 (1201)
|.....+++...+++|+-+||.|
T Consensus 72 g~g~s~~~~~~~~~~G~~VIDlS 94 (334)
T PRK14874 72 GGSVSKKYAPKAAAAGAVVIDNS 94 (334)
T ss_pred ChHHHHHHHHHHHhCCCEEEECC
Confidence 99888999999999999999986
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0028 Score=71.76 Aligned_cols=77 Identities=23% Similarity=0.366 Sum_probs=55.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----CeeEE------------EeecCCCCchHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RVEAT------------LIDVNNGGSDNL 627 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v~~v------------~lDV~D~~~e~L 627 (1201)
++||+|||+|.||..++..|++. +++|++.|+++++++++.+... +++.- .+.. ...+
T Consensus 1 ~~~V~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~----~~~~ 75 (288)
T PRK09260 1 IEKLVVVGAGVMGRGIAYVFAVS-GFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY----SLDL 75 (288)
T ss_pred CcEEEEECccHHHHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE----eCcH
Confidence 46899999999999999999876 5789999999998877653210 00000 0111 1246
Q ss_pred HhhccCCcEEEEcCCCccc
Q psy12817 628 SGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 628 ~elI~~~DVVIs~lP~~~h 646 (1201)
.+.++++|+||.|+|....
T Consensus 76 ~~~~~~aD~Vi~avpe~~~ 94 (288)
T PRK09260 76 KAAVADADLVIEAVPEKLE 94 (288)
T ss_pred HHhhcCCCEEEEeccCCHH
Confidence 6778899999999997653
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.003 Score=66.43 Aligned_cols=80 Identities=15% Similarity=0.275 Sum_probs=54.5
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhh
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFA 275 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~ 275 (1201)
.+++|+|.|.+|+|..+.++.+| ++|+|+++.+ ...++....| |... -.
T Consensus 24 k~vvV~GYG~vG~g~A~~lr~~G----------------a~V~V~e~DP--i~alqA~~dG-f~v~------------~~ 72 (162)
T PF00670_consen 24 KRVVVIGYGKVGKGIARALRGLG----------------ARVTVTEIDP--IRALQAAMDG-FEVM------------TL 72 (162)
T ss_dssp SEEEEE--SHHHHHHHHHHHHTT-----------------EEEEE-SSH--HHHHHHHHTT--EEE-------------H
T ss_pred CEEEEeCCCcccHHHHHHHhhCC----------------CEEEEEECCh--HHHHHhhhcC-cEec------------CH
Confidence 67999999999999999999999 6788888765 3445554444 4321 12
Q ss_pred hhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 276 SKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 276 ~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
++.++.+|++|++ .....+|+.+++++ ||.|
T Consensus 73 ~~a~~~adi~vta----TG~~~vi~~e~~~~-mkdg 103 (162)
T PF00670_consen 73 EEALRDADIFVTA----TGNKDVITGEHFRQ-MKDG 103 (162)
T ss_dssp HHHTTT-SEEEE-----SSSSSSB-HHHHHH-S-TT
T ss_pred HHHHhhCCEEEEC----CCCccccCHHHHHH-hcCC
Confidence 4578899999998 44567899999999 9999
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0027 Score=68.29 Aligned_cols=75 Identities=15% Similarity=0.278 Sum_probs=61.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
+++|+|+| +|.+|+.++++|++. +.+|++.+|++++++++...+ .++..+.+|+.| .+.+.++++ .
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAE-GYKVAITARDQKELEEAAAELNNKGNVLGLAADVRD--EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHC-CCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 47899999 699999999999986 678999999998887776554 357788899998 777776665 6
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
+|+||++..
T Consensus 83 ~d~vi~~ag 91 (237)
T PRK07326 83 LDVLIANAG 91 (237)
T ss_pred CCEEEECCC
Confidence 899999974
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0027 Score=70.38 Aligned_cols=74 Identities=14% Similarity=0.227 Sum_probs=62.4
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~DV 636 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++... ++..+.+|++| .+.++++++ +.|+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~l~~~~~~--~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQ-GYTVYGAARRVDKMEDLASL--GVHPLSLDVTD--EASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhC--CCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCE
Confidence 57899999 699999999999986 57899999999888776542 57889999998 788877775 6899
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++.+.
T Consensus 78 li~~ag~ 84 (273)
T PRK06182 78 LVNNAGY 84 (273)
T ss_pred EEECCCc
Confidence 9999864
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0018 Score=73.22 Aligned_cols=77 Identities=16% Similarity=0.171 Sum_probs=60.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHH---HHH---cCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKV---TNE---FGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~L---a~~---~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
..++|+|.| +|++|+.+++.|.++ +++|++.+|+.+..... ... .++++.+..|+.| .+.+.++++++|+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~ 79 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQR-GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLE--EGSFDSVVDGCEG 79 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHC-CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccC--cchHHHHHcCCCE
Confidence 458999999 799999999999987 57888888876543222 111 1357788899998 7889999999999
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 80 Vih~A~~ 86 (322)
T PLN02662 80 VFHTASP 86 (322)
T ss_pred EEEeCCc
Confidence 9999853
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0028 Score=69.00 Aligned_cols=75 Identities=11% Similarity=0.126 Sum_probs=62.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC----CcEEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS----ADLVVS 639 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~----~DVVIs 639 (1201)
|++++|.| +|.+|+.+++.|+++ +.+|++.+|+.++++++.....++..+.+|++| .+++++++++ .|++|+
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ-GWQVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhcccCCCEEEE
Confidence 57899999 799999999999986 578999999999888887655568889999998 8888888765 466666
Q ss_pred cCC
Q psy12817 640 LLP 642 (1201)
Q Consensus 640 ~lP 642 (1201)
+..
T Consensus 78 ~ag 80 (240)
T PRK06101 78 NAG 80 (240)
T ss_pred cCc
Confidence 653
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0059 Score=66.86 Aligned_cols=71 Identities=20% Similarity=0.277 Sum_probs=65.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
++|+|+| +|++|+.+++.|.++ +++|.++.|+.+++..+. .+++.+..|..+ ...+...+++.|.++.+.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~-~~~v~~~~r~~~~~~~~~---~~v~~~~~d~~~--~~~l~~a~~G~~~~~~i~~ 72 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR-GHEVRAAVRNPEAAAALA---GGVEVVLGDLRD--PKSLVAGAKGVDGVLLISG 72 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC-CCEEEEEEeCHHHHHhhc---CCcEEEEeccCC--HhHHHHHhccccEEEEEec
Confidence 5899999 799999999999988 789999999999998877 578999999998 8899999999999999987
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0026 Score=68.82 Aligned_cols=78 Identities=12% Similarity=0.221 Sum_probs=62.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+|++++|.| +|.+|+.+++.|+++ +.+|++++|+.++.+.+.+.. .++..+.+|++| .+.+.++++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 80 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKA-GWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQ 80 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 3578999999 699999999999986 468999999998877765543 247788899998 777766654
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~~~id~lv~~ag~ 93 (241)
T PRK07454 81 FGCPDVLINNAGM 93 (241)
T ss_pred cCCCCEEEECCCc
Confidence 47999999753
|
|
| >COG5310 Homospermidine synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0015 Score=74.12 Aligned_cols=196 Identities=15% Similarity=0.242 Sum_probs=123.3
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC---CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhccC---CcEEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN---IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLVRS---ADLVV 638 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~---~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI~~---~DVVI 638 (1201)
-+|++||.|.||+-..-.+.++-+ -+++|.|......+.+.++ ++++++--++..+ .+-|..++++ .-.+|
T Consensus 14 gpIimIGfGSigrgTLPLierhf~~d~~~~~viDp~ek~~k~~~~~--girfV~e~it~~Nyk~vL~pll~~~~gqgf~v 91 (481)
T COG5310 14 GPIIMIGFGSIGRGTLPLIERHFKFDRSRMVVIDPREKDRKILDER--GIRFVQEAITRDNYKDVLKPLLKGVGGQGFCV 91 (481)
T ss_pred CcEEEEeecccccccchhHHHhcCCChhheEEechhHHHHHHHHhh--hhHHHHHhcChhhHHHHHHHHhhcCCCceEEE
Confidence 579999999999987777766533 3588999887666655543 4554444343200 1234444554 67899
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEcc-------CChHH----------HHH--HHHHHHHc-CCEEEeccccCchhHHHH
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTAS-------YLSPE----------MMA--LHERAASA-GITVLNEVGLDPGIDHLL 698 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~S-------yvs~e----------~~e--Lde~AkeA-GVtil~e~GlDPGIdhml 698 (1201)
|+.-..-...+++.|-++|+-|||++ |.... .++ +.+..++- |-+.+..||..||+...+
T Consensus 92 nLSvd~~s~Dlmr~crk~~vLYidTvVEpW~gfyfDa~adn~artnyaLRet~lrEk~r~pgg~TaVs~cGANPGmvswF 171 (481)
T COG5310 92 NLSVDTSSLDLMRLCRKHGVLYIDTVVEPWLGFYFDAQADNAARTNYALRETVLREKRRNPGGPTAVSTCGANPGMVSWF 171 (481)
T ss_pred EeEeccchhHHHHHHHHcCeEEEeeeeccccccchhhhhhhhhhhhHHHHHHHHHHhccCCCCCeeeeecCCCchHHHHH
Confidence 98766667889999999999999985 21111 122 23334444 568999999999998888
Q ss_pred HHHHHHHh-----------------------hhcCCcEEE-EEeecCCCCCCCCCCCccccccccChHHHHHHhccceee
Q psy12817 699 AMECIDAA-----------------------HLNGGKVES-FVSYCGGLPAPECSENPLRYKFSWSPRGVLLNTLSSAKY 754 (1201)
Q Consensus 699 A~~~idei-----------------------~~~ggkV~s-f~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~ 754 (1201)
..+.+=.+ +..|-+... .+--..+-+.|. .+-++--+||.+|.+.+...||+.
T Consensus 172 VKqaLvdlAad~~ld~~ep~~ddr~gwAkLmkK~GVkgiHiaeRdTqra~~Pk---p~n~fwntWsveGfi~EG~qPaEl 248 (481)
T COG5310 172 VKQALVDLAADLGLDFEEPAQDDREGWAKLMKKAGVKGIHIAERDTQRAKKPK---PFNGFWNTWSVEGFITEGLQPAEL 248 (481)
T ss_pred HHHHHHHHHHHhCcCccCCcchhhHHHHHHHHHcCCceEEEEeeccccCCCCC---CCcccccceeeeeeccCCCChhhh
Confidence 76632211 111222211 111122223222 333444589999999999999999
Q ss_pred eeCCeEEEecCC
Q psy12817 755 LQNSQVVDIPAG 766 (1201)
Q Consensus 755 l~dG~~v~Vp~~ 766 (1201)
..+-.....|..
T Consensus 249 gWGtHenw~pkn 260 (481)
T COG5310 249 GWGTHENWMPKN 260 (481)
T ss_pred ccCCccccCCcc
Confidence 888766666543
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0026 Score=77.62 Aligned_cols=113 Identities=13% Similarity=0.100 Sum_probs=69.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-------CCeeEE------EeecCCCCchHHHhhc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-------GRVEAT------LIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-------~~v~~v------~lDV~D~~~e~L~elI 631 (1201)
.+||.|||+|.||..++..|++. +++|++.|+++++++++.+.. ...... .+.+. +++.+++
T Consensus 4 i~kIavIG~G~MG~~iA~~la~~-G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~----~~~~ea~ 78 (495)
T PRK07531 4 IMKAACIGGGVIGGGWAARFLLA-GIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFC----ASLAEAV 78 (495)
T ss_pred cCEEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEee----CCHHHHh
Confidence 46899999999999999999986 689999999999877653211 000000 01122 3567788
Q ss_pred cCCcEEEEcCCCccc--HHHH---HHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 632 RSADLVVSLLPYNLH--HHVA---EFCIQHGKNLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~h--~~Va---kacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
+++|+|+.|+|.... ..+. ...+..++ +++.|-......++.+.+++.+..
T Consensus 79 ~~aD~Vieavpe~~~vk~~l~~~l~~~~~~~~-iI~SsTsgi~~s~l~~~~~~~~r~ 134 (495)
T PRK07531 79 AGADWIQESVPERLDLKRRVLAEIDAAARPDA-LIGSSTSGFLPSDLQEGMTHPERL 134 (495)
T ss_pred cCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCHHHHHhhcCCcceE
Confidence 999999999997753 2221 12223333 455544333344554444444443
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0021 Score=74.07 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=61.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhccCCc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
.+.++|+|.| +|++|+.+++.|++. +.+|++.+|+.+.+..+.... +++.++..|+.| .+.+.++++++|
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d--~~~~~~~~~~~d 79 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLER-GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAV--EGSFDDAIRGCT 79 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHC-CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCC--hhhHHHHHhCCC
Confidence 3467999999 799999999999986 578988888876655443221 146778899998 788999999999
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
.||++..
T Consensus 80 ~ViH~A~ 86 (351)
T PLN02650 80 GVFHVAT 86 (351)
T ss_pred EEEEeCC
Confidence 9999984
|
|
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0059 Score=70.28 Aligned_cols=92 Identities=11% Similarity=0.104 Sum_probs=62.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-cCCcEEEEc
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-RSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-~~~DVVIs~ 640 (1201)
...+++|+|||+|.||+.++..|.+. +.+|++++++... +.+..+ ++.. .. .+.+++ .++|+||.|
T Consensus 33 ~~~~~kI~IIG~G~mG~slA~~L~~~-G~~V~~~d~~~~~--~~a~~~-gv~~----~~-----~~~e~~~~~aDvVila 99 (304)
T PLN02256 33 KSRKLKIGIVGFGNFGQFLAKTFVKQ-GHTVLATSRSDYS--DIAAEL-GVSF----FR-----DPDDFCEEHPDVVLLC 99 (304)
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECccHH--HHHHHc-CCee----eC-----CHHHHhhCCCCEEEEe
Confidence 34678999999999999999999876 4689999998642 334444 3321 22 234444 469999999
Q ss_pred CCCcccHHHHHHH----HHcCCeEEEccCC
Q psy12817 641 LPYNLHHHVAEFC----IQHGKNLVTASYL 666 (1201)
Q Consensus 641 lP~~~h~~Vakac----IeaGkh~VD~Syv 666 (1201)
+|......+++.. ++.++-++|.+-+
T Consensus 100 vp~~~~~~vl~~l~~~~l~~~~iviDv~Sv 129 (304)
T PLN02256 100 TSILSTEAVLRSLPLQRLKRSTLFVDVLSV 129 (304)
T ss_pred cCHHHHHHHHHhhhhhccCCCCEEEecCCc
Confidence 9976656665543 3455667776543
|
|
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0028 Score=76.99 Aligned_cols=125 Identities=12% Similarity=0.174 Sum_probs=86.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHcC-----Cee-------EEEeecCCCCchHHHhhc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEFG-----RVE-------ATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~~-----~v~-------~v~lDV~D~~~e~L~elI 631 (1201)
||||.|+|+|+||.+++-.|++.+ +++|+.+|.++++.+++.+... +.. ...+.+++ .+.+.+
T Consensus 1 ~m~I~ViG~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~----~~~~~i 76 (473)
T PLN02353 1 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFST----DVEKHV 76 (473)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEc----CHHHHH
Confidence 689999999999999999999874 6889999999999998765421 100 00122222 345667
Q ss_pred cCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHH
Q psy12817 632 RSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLA 699 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA 699 (1201)
+++|+++.|+|...... +. .+.+-.|++|+...++++.+.. +.|.+++.+.-+-||...-+.
T Consensus 77 ~~advi~I~V~TP~~~~----g~-~~~~~~Dls~v~~a~~~i~~~l-~~~~lVv~~STvp~Gtt~~~~ 138 (473)
T PLN02353 77 AEADIVFVSVNTPTKTR----GL-GAGKAADLTYWESAARMIADVS-KSDKIVVEKSTVPVKTAEAIE 138 (473)
T ss_pred hcCCEEEEEeCCCCCCC----CC-cCCCCCcHHHHHHHHHHHHhhC-CCCcEEEEeCCCCCChHHHHH
Confidence 89999999997544200 00 0023457777777777775544 457888889999999876544
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0028 Score=68.84 Aligned_cols=76 Identities=13% Similarity=0.290 Sum_probs=61.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhccC----C
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVRS----A 634 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~~----~ 634 (1201)
||+|+|.| +|++|..+++.|++. +.+|++++|+.++.+.+.+.. .++..+.+|+.| .+++++++++ .
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 77 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA-GARLYLAARDVERLERLADDLRARGAVAVSTHELDILD--TASHAAFLDSLPALP 77 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC--hHHHHHHHHHHhhcC
Confidence 68999999 799999999999987 578999999998776655432 357788999998 7777776653 5
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 78 d~vv~~ag~ 86 (243)
T PRK07102 78 DIVLIAVGT 86 (243)
T ss_pred CEEEECCcC
Confidence 999988753
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.003 Score=71.93 Aligned_cols=77 Identities=9% Similarity=0.188 Sum_probs=64.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+...++..+.+|++| .++++++++ +.|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~-G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQA-GAHVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 457899999 699999999999986 578999999999888877666567889999998 777776653 579
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99999863
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0033 Score=68.57 Aligned_cols=79 Identities=18% Similarity=0.222 Sum_probs=56.8
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC------CeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG------RVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~------~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
|||+||| +|.||..++..|.+. +.+|++.+|+.++++.++..+. ++.. .+...+ ..+.++++|+||
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~-G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~-~~~~~~-----~~ea~~~aDvVi 73 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKA-GNKIIIGSRDLEKAEEAAAKALEELGHGGSDI-KVTGAD-----NAEAAKRADVVI 73 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-CCEEEEEEcCHHHHHHHHHHHHhhccccCCCc-eEEEeC-----hHHHHhcCCEEE
Confidence 5899997 899999999999986 4789999999999888766431 1100 011112 245567899999
Q ss_pred EcCCCcccHHHHH
Q psy12817 639 SLLPYNLHHHVAE 651 (1201)
Q Consensus 639 s~lP~~~h~~Vak 651 (1201)
.|+|+.....+++
T Consensus 74 lavp~~~~~~~l~ 86 (219)
T TIGR01915 74 LAVPWDHVLKTLE 86 (219)
T ss_pred EECCHHHHHHHHH
Confidence 9999776555544
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0028 Score=70.61 Aligned_cols=87 Identities=17% Similarity=0.188 Sum_probs=61.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC---CeEEEE-eCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN---IHITLG-SLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~---~~VtVa-dR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+||.+||+|.||.++++.|.+.+. .+|++. +|+.++++.+.+ + ++.. .+ ...++++++|+||.|+
T Consensus 1 ~kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~-~-g~~~-----~~----~~~e~~~~aDvVil~v 69 (266)
T PLN02688 1 FRVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQS-L-GVKT-----AA----SNTEVVKSSDVIILAV 69 (266)
T ss_pred CeEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHH-c-CCEE-----eC----ChHHHHhcCCEEEEEE
Confidence 579999999999999999987642 278888 999998877654 3 4432 11 2345567899999999
Q ss_pred CCcccHHHHHHH---HHcCCeEEEc
Q psy12817 642 PYNLHHHVAEFC---IQHGKNLVTA 663 (1201)
Q Consensus 642 P~~~h~~Vakac---IeaGkh~VD~ 663 (1201)
|...-..+.+.. +..++.+++.
T Consensus 70 ~~~~~~~vl~~l~~~~~~~~~iIs~ 94 (266)
T PLN02688 70 KPQVVKDVLTELRPLLSKDKLLVSV 94 (266)
T ss_pred CcHHHHHHHHHHHhhcCCCCEEEEe
Confidence 765445554433 3445656654
|
|
| >COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0016 Score=75.65 Aligned_cols=117 Identities=19% Similarity=0.239 Sum_probs=86.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
-..++|||+|..++..++.+...-+. +|.|.+|+++.+++++..+.+--.. ++.. .++.+++++++|+|+.|+|.
T Consensus 130 a~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~--~v~a--~~s~~~av~~aDiIvt~T~s 205 (330)
T COG2423 130 ASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGE--AVGA--ADSAEEAVEGADIVVTATPS 205 (330)
T ss_pred CcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCc--ccee--ccCHHHHhhcCCEEEEecCC
Confidence 36899999999999999999875444 5999999999999998765211000 1222 34578899999999999986
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcC-CEEEe
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAG-ITVLN 686 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAG-Vtil~ 686 (1201)
.- +-+-..-++.|+|+.-+.-..|.+++++.+..+.- ..++.
T Consensus 206 ~~-Pil~~~~l~~G~hI~aiGad~p~k~Eld~e~l~ra~~vvvD 248 (330)
T COG2423 206 TE-PVLKAEWLKPGTHINAIGADAPGKRELDPEVLARADRVVVD 248 (330)
T ss_pred CC-CeecHhhcCCCcEEEecCCCCcccccCCHHHHHhcCeEEEc
Confidence 54 45556668899999888655788888887654444 55543
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.003 Score=68.47 Aligned_cols=73 Identities=22% Similarity=0.328 Sum_probs=60.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc----CCcEEEEc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR----SADLVVSL 640 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~----~~DVVIs~ 640 (1201)
||++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.. ++..+.+|+.| .+.++++++ ..|++|++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~-g~~v~~~~r~~~~~~~~~~~~-~~~~~~~D~~~--~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND-GHKVTLVGARRDDLEVAAKEL-DVDAIVCDNTD--PASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhc-cCcEEecCCCC--HHHHHHHHHHHhhcCcEEEEC
Confidence 4799999 599999999999986 578999999999988877665 56788899998 777777665 47999998
Q ss_pred CC
Q psy12817 641 LP 642 (1201)
Q Consensus 641 lP 642 (1201)
.+
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 64
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0023 Score=74.57 Aligned_cols=93 Identities=17% Similarity=0.227 Sum_probs=65.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHcCC---------eeEEEeecCCCCchHHHhhccCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEFGR---------VEATLIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~~~---------v~~v~lDV~D~~~e~L~elI~~~ 634 (1201)
+||+|+| +|++|+.+++.|.+++.++++.+ ++..+..+.+...++. .....+.-.+ ++ ...++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~ 74 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPE--PV----ASKDV 74 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCC--HH----HhccC
Confidence 5899999 59999999999998888887655 5444333333332221 1111111111 11 23689
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
|+|+.|+|...+.+++..+.++|+++||.|
T Consensus 75 DvVf~a~p~~~s~~~~~~~~~~G~~VIDls 104 (341)
T TIGR00978 75 DIVFSALPSEVAEEVEPKLAEAGKPVFSNA 104 (341)
T ss_pred CEEEEeCCHHHHHHHHHHHHHCCCEEEECC
Confidence 999999999999999999999999999986
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0022 Score=72.64 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=56.0
Q ss_pred EEEc-CchhHHHHHHHHHhCCC-CeEEEEeCCHHHHH-HHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 569 LLLG-AGYVSRPLIEYLHRDEN-IHITLGSLLKEDID-KVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 569 LILG-AG~VG~~va~~La~~~~-~~VtVadR~~ekAe-~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
||.| +|++|+.+++.|.+++. .+|.+.|+...... .....++..++++.|++| .+++.++++++|+||.+.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d--~~~l~~a~~g~d~V~H~A 74 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITD--PESLEEALEGVDVVFHTA 74 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEecccc--HHHHHHHhcCCceEEEeC
Confidence 4777 89999999999999875 67888888765432 222333334488999998 899999999999999996
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0036 Score=74.31 Aligned_cols=100 Identities=20% Similarity=0.216 Sum_probs=71.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-------------------HHHH----HHHHcCCeeE--EE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-------------------DIDK----VTNEFGRVEA--TL 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-------------------kAe~----La~~~~~v~~--v~ 616 (1201)
..+..||+|+|+|.+|..++.+|++.+--+++++|.+.- |++. +.+..|.++. +.
T Consensus 35 ~L~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 35 RLKAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HHhcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 356789999999999999999999987667888775411 3333 2233355443 33
Q ss_pred eecCCCCchHHHhhccCCcEEEEcCC-CcccHHHHHHHHHcCCeEEEcc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLLP-YNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~lP-~~~h~~VakacIeaGkh~VD~S 664 (1201)
..++ .+...++++++|+||+|+- +.....+.+.|.+.++.+|..+
T Consensus 115 ~~~~---~~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p~v~~~ 160 (390)
T PRK07411 115 TRLS---SENALDILAPYDVVVDGTDNFPTRYLVNDACVLLNKPNVYGS 160 (390)
T ss_pred cccC---HHhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 3333 3456788899999999984 3345667899999999998764
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0038 Score=67.44 Aligned_cols=101 Identities=16% Similarity=0.207 Sum_probs=69.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH---------------------HHHH----HHHHcCCeeEEEe
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE---------------------DIDK----VTNEFGRVEATLI 617 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e---------------------kAe~----La~~~~~v~~v~l 617 (1201)
.+..||+|+|+|.+|..+++.|++.+--+++++|.+.- |++. +.+..|.++....
T Consensus 17 L~~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~ 96 (198)
T cd01485 17 LRSAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV 96 (198)
T ss_pred HhhCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 55689999999999999999999987667988875411 2222 2233355544333
Q ss_pred e--cCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 618 D--VNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 618 D--V~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
+ +.+ ..+...++++++|+||.|... .....+.+.|.+.++.++..+
T Consensus 97 ~~~~~~-~~~~~~~~~~~~dvVi~~~d~~~~~~~ln~~c~~~~ip~i~~~ 145 (198)
T cd01485 97 EEDSLS-NDSNIEEYLQKFTLVIATEENYERTAKVNDVCRKHHIPFISCA 145 (198)
T ss_pred eccccc-chhhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 2 321 123456778899999999743 334567789999999988874
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0034 Score=68.48 Aligned_cols=78 Identities=17% Similarity=0.253 Sum_probs=63.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC--eeEEEeecCCCCchHHHhhcc-------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR--VEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~--v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
.+.++++|.| .|.+|+.+++.|+++ +++|++.+|+.+..+.+.+..++ +..+.+|+.| ++.+.++++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEA-GARVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVERFG 85 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence 4568999999 699999999999986 56899999999888877765543 4778899998 777776654
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
++|+||++...
T Consensus 86 ~~d~vi~~ag~ 96 (264)
T PRK12829 86 GLDVLVNNAGI 96 (264)
T ss_pred CCCEEEECCCC
Confidence 58999999853
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0034 Score=70.00 Aligned_cols=75 Identities=17% Similarity=0.350 Sum_probs=56.1
Q ss_pred eEEEEc-CchhHHHHHHHHHhCC-CCeEEEEeCCH--HHHHHHHHH--cCCeeEEEeecCCCCchHHHhhccC--CcEEE
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDE-NIHITLGSLLK--EDIDKVTNE--FGRVEATLIDVNNGGSDNLSGLVRS--ADLVV 638 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~-~~~VtVadR~~--ekAe~La~~--~~~v~~v~lDV~D~~~e~L~elI~~--~DVVI 638 (1201)
+|+|.| +|++|+.+++.|.+.+ +++|++.+|.. .+.+.+... .+++..+..|+.| .+.+.+++++ +|+||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~d~vi 78 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGD--RELVSRLFTEHQPDAVV 78 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcC--HHHHHHHHhhcCCCEEE
Confidence 589999 6999999999998864 47888887632 122222211 1357788899998 8889999887 89999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
+|...
T Consensus 79 ~~a~~ 83 (317)
T TIGR01181 79 HFAAE 83 (317)
T ss_pred Ecccc
Confidence 99853
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0039 Score=73.52 Aligned_cols=98 Identities=10% Similarity=0.163 Sum_probs=66.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC---------------H-------HHHHHHHHHc----CCeeEEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL---------------K-------EDIDKVTNEF----GRVEATL 616 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~---------------~-------ekAe~La~~~----~~v~~v~ 616 (1201)
.+..+|+|+|+|.+|..+++.|++.+--+++++|.+ . .|++.+++.+ +++.+..
T Consensus 174 L~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~~~~ 253 (393)
T PRK06153 174 LEGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIVPHP 253 (393)
T ss_pred HhhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEEEEe
Confidence 457899999999999999999999876678888754 1 2344444333 2344444
Q ss_pred eecCCCCchHHHhhccCCcEEEEcCCCcc-cHHHHHHHHHcCCeEEEcc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLLPYNL-HHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~lP~~~-h~~VakacIeaGkh~VD~S 664 (1201)
..+ + .+.+. .+.++|+||.|+.... ...+.+.|.+.++.+||..
T Consensus 254 ~~I-~--~~n~~-~L~~~DiV~dcvDn~~aR~~ln~~a~~~gIP~Id~G 298 (393)
T PRK06153 254 EYI-D--EDNVD-ELDGFTFVFVCVDKGSSRKLIVDYLEALGIPFIDVG 298 (393)
T ss_pred ecC-C--HHHHH-HhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEee
Confidence 344 3 34444 5688999999996433 2445667777777777754
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0038 Score=68.22 Aligned_cols=75 Identities=13% Similarity=0.212 Sum_probs=61.5
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------CCcE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------SADL 636 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~~DV 636 (1201)
|+|+|.| +|++|..+++.|.+. +.+|++.+|+.++++.+.... .++..+.+|+.| .+++.++++ +.|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 5799999 699999999999986 578999999999888776654 257788999998 777766654 6899
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 78 vi~~ag~ 84 (248)
T PRK10538 78 LVNNAGL 84 (248)
T ss_pred EEECCCc
Confidence 9999753
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.005 Score=62.96 Aligned_cols=91 Identities=16% Similarity=0.292 Sum_probs=71.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.+||++||+| .|..++..|.+. +++|+..|.+++..+..... .+.++..|+.+ ++ -++-+++|+|.++=|+
T Consensus 16 ~~~kileIG~G-fG~~vA~~L~~~-G~~ViaIDi~~~aV~~a~~~--~~~~v~dDlf~--p~--~~~y~~a~liysirpp 87 (134)
T PRK04148 16 KNKKIVELGIG-FYFKVAKKLKES-GFDVIVIDINEKAVEKAKKL--GLNAFVDDLFN--PN--LEIYKNAKLIYSIRPP 87 (134)
T ss_pred cCCEEEEEEec-CCHHHHHHHHHC-CCEEEEEECCHHHHHHHHHh--CCeEEECcCCC--CC--HHHHhcCCEEEEeCCC
Confidence 34789999999 888899999976 68999999999987766543 57888999987 32 2344689999999854
Q ss_pred -cccHHHHHHHHHcCCeEEE
Q psy12817 644 -NLHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 644 -~~h~~VakacIeaGkh~VD 662 (1201)
.+|+.+++.|-+-|++++-
T Consensus 88 ~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 88 RDLQPFILELAKKINVPLII 107 (134)
T ss_pred HHHHHHHHHHHHHcCCCEEE
Confidence 5788888888777777554
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0033 Score=73.71 Aligned_cols=74 Identities=18% Similarity=0.281 Sum_probs=56.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+.|||+|.| +|++|+.++++|.++ +++|++++|..... +.......+.+..|+.| .+.+.++++++|+||++..
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~-G~~V~~v~r~~~~~--~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAE-GHYIIASDWKKNEH--MSEDMFCHEFHLVDLRV--MENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhC-CCEEEEEEeccccc--cccccccceEEECCCCC--HHHHHHHHhCCCEEEEccc
Confidence 468999999 699999999999986 57899998864321 11111124667789987 7788888889999999984
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0065 Score=65.68 Aligned_cols=99 Identities=15% Similarity=0.155 Sum_probs=69.0
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHH----HHHHcCCeeEEE--
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDK----VTNEFGRVEATL-- 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~----La~~~~~v~~v~-- 616 (1201)
..+..||+|+|+|.+|..+++.|+..+--+++++|.+. .|++. +.+..|.++...
T Consensus 18 ~L~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~ 97 (197)
T cd01492 18 RLRSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT 97 (197)
T ss_pred HHHhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence 35578999999999999999999998766799887541 13333 333335544322
Q ss_pred eecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
..+. +...++++++|+||+|.+. .....+.+.|.+.+++++...
T Consensus 98 ~~~~----~~~~~~~~~~dvVi~~~~~~~~~~~ln~~c~~~~ip~i~~~ 142 (197)
T cd01492 98 DDIS----EKPEEFFSQFDVVVATELSRAELVKINELCRKLGVKFYATG 142 (197)
T ss_pred cCcc----ccHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 2222 2345677899999999853 334667889999999998874
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.003 Score=71.31 Aligned_cols=80 Identities=18% Similarity=0.314 Sum_probs=66.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----CeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
..++.++|-| ++.+|..+++.|+++ +++|+++.|+.++++++++++. .+..+.+|+++ ++++..+..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~-g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~--~~~~~~l~~~l~~ 80 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARR-GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSD--PEALERLEDELKE 80 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC--hhHHHHHHHHHHh
Confidence 4578999999 699999999999997 5789999999999999998763 25688899998 777766543
Q ss_pred ---CCcEEEEcCCCcc
Q psy12817 633 ---SADLVVSLLPYNL 645 (1201)
Q Consensus 633 ---~~DVVIs~lP~~~ 645 (1201)
+.|++||+..+..
T Consensus 81 ~~~~IdvLVNNAG~g~ 96 (265)
T COG0300 81 RGGPIDVLVNNAGFGT 96 (265)
T ss_pred cCCcccEEEECCCcCC
Confidence 4899999998654
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0035 Score=68.82 Aligned_cols=75 Identities=17% Similarity=0.268 Sum_probs=62.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccC-------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRS------- 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~------- 633 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+..+ ++..+.+|++| .+++.+++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ-GATLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 57899999 799999999999987 5789999999998887766543 46788999998 7777776543
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
.|++|++..
T Consensus 79 id~lv~~ag 87 (257)
T PRK07024 79 PDVVIANAG 87 (257)
T ss_pred CCEEEECCC
Confidence 699999975
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0031 Score=68.17 Aligned_cols=77 Identities=17% Similarity=0.255 Sum_probs=62.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhcc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+.++|+|+| +|.+|+.+++.|+++ +.+|++.+|+.++.+.+...+. ++.++.+|+.| .+.+.++++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 80 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAE-GARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD--EADVEAAVAAALERFG 80 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 457999999 699999999999987 5789999999988877665542 36788899998 888877765
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~~d~vi~~ag~ 91 (251)
T PRK07231 81 SVDILVNNAGT 91 (251)
T ss_pred CCCEEEECCCC
Confidence 46999999854
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0035 Score=69.73 Aligned_cols=77 Identities=13% Similarity=0.219 Sum_probs=62.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS----- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~----- 633 (1201)
++++|+|.| +|++|+.+++.|+++ +.+|++++|+.+.+++..... .++..+..|++| .+.+.+++++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAAL-GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD--AAQVEALADAALERF 81 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 458899999 799999999999987 578999999988777665543 246678899998 7888877763
Q ss_pred --CcEEEEcCCC
Q psy12817 634 --ADLVVSLLPY 643 (1201)
Q Consensus 634 --~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 82 g~id~vi~~Ag~ 93 (287)
T PRK06194 82 GAVHLLFNNAGV 93 (287)
T ss_pred CCCCEEEECCCC
Confidence 6999999854
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0068 Score=68.51 Aligned_cols=93 Identities=16% Similarity=0.161 Sum_probs=64.7
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
+||+|||+|.||..++..|.+. +++|++.|++.+.++++...- .+.. ..+ .. +.++++|+||.|+|...
T Consensus 1 m~I~IIG~G~mG~sla~~L~~~-g~~V~~~d~~~~~~~~a~~~g-~~~~----~~~----~~-~~~~~aDlVilavp~~~ 69 (279)
T PRK07417 1 MKIGIVGLGLIGGSLGLDLRSL-GHTVYGVSRRESTCERAIERG-LVDE----AST----DL-SLLKDCDLVILALPIGL 69 (279)
T ss_pred CeEEEEeecHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCC-Cccc----ccC----CH-hHhcCCCEEEEcCCHHH
Confidence 4899999999999999999876 578999999998887765431 1110 111 12 34678999999999766
Q ss_pred cHHHHHHH---HHcCCeEEEccCChHH
Q psy12817 646 HHHVAEFC---IQHGKNLVTASYLSPE 669 (1201)
Q Consensus 646 h~~Vakac---IeaGkh~VD~Syvs~e 669 (1201)
...+.+.. +..++-+.|.+-+...
T Consensus 70 ~~~~~~~l~~~l~~~~ii~d~~Svk~~ 96 (279)
T PRK07417 70 LLPPSEQLIPALPPEAIVTDVGSVKAP 96 (279)
T ss_pred HHHHHHHHHHhCCCCcEEEeCcchHHH
Confidence 55554433 3445667777655443
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0025 Score=73.58 Aligned_cols=80 Identities=20% Similarity=0.236 Sum_probs=62.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+|.||.|+| +|++|+.+++.|.+++.++++-...+..+ +..+ . .+..+++|+|+.|+|
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~----------------~~~~--~---~~~~~~~DvvFlalp 59 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK----------------DAAA--R---RELLNAADVAILCLP 59 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC----------------cccC--c---hhhhcCCCEEEECCC
Confidence 368999999 79999999999999998886544433221 0111 1 123457999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEcc
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S 664 (1201)
.....+++..+.+.|+.+||.|
T Consensus 60 ~~~s~~~~~~~~~~g~~VIDlS 81 (313)
T PRK11863 60 DDAAREAVALIDNPATRVIDAS 81 (313)
T ss_pred HHHHHHHHHHHHhCCCEEEECC
Confidence 9888889999999999999997
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0032 Score=69.60 Aligned_cols=77 Identities=17% Similarity=0.232 Sum_probs=62.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
++++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.....++..+.+|++| .+++.++++ ..|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 80 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAAL-GARVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPID 80 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 357899999 699999999999986 578999999999988887766557888999998 777655443 469
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
++|++...
T Consensus 81 ~li~~ag~ 88 (273)
T PRK07825 81 VLVNNAGV 88 (273)
T ss_pred EEEECCCc
Confidence 99999753
|
|
| >COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0039 Score=70.44 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=69.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC---CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN---IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~---~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
|+||.+||+|.||++++.-|.+.+. .+|.+.+|+.++++.+++.|+ +.. .. ...+++.++|+|+-|+
T Consensus 1 ~~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g-~~~----~~-----~~~~~~~~advv~Lav 70 (266)
T COG0345 1 MMKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYG-VVT----TT-----DNQEAVEEADVVFLAV 70 (266)
T ss_pred CceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcC-Ccc----cC-----cHHHHHhhCCEEEEEe
Confidence 5899999999999999999998762 579999999999998999884 331 22 2455667899999999
Q ss_pred CCcccHHHHHHH--HHcCCeEEEcc
Q psy12817 642 PYNLHHHVAEFC--IQHGKNLVTAS 664 (1201)
Q Consensus 642 P~~~h~~Vakac--IeaGkh~VD~S 664 (1201)
.+....++...+ +..++.+|.+.
T Consensus 71 KPq~~~~vl~~l~~~~~~~lvISia 95 (266)
T COG0345 71 KPQDLEEVLSKLKPLTKDKLVISIA 95 (266)
T ss_pred ChHhHHHHHHHhhcccCCCEEEEEe
Confidence 655556666555 34677777763
|
|
| >PRK06813 homoserine dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0062 Score=71.25 Aligned_cols=143 Identities=18% Similarity=0.178 Sum_probs=84.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-------C--Ce-EEEEeCCHHHHH-------HHHHHcCCeeEEEe-e-cCCCCch
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-------N--IH-ITLGSLLKEDID-------KVTNEFGRVEATLI-D-VNNGGSD 625 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-------~--~~-VtVadR~~ekAe-------~La~~~~~v~~v~l-D-V~D~~~e 625 (1201)
+.+|+|+|+|.||+.+++.|.++. + ++ +.|++++..... .+.+. .. ..... + ..+ +.+
T Consensus 2 ~i~I~liG~G~VG~~~~~~L~~~~~~l~~~~g~~l~v~~i~~~~~~~~~~~gi~~~~~l~~-~~-~~~~~~~~~~~-~~~ 78 (346)
T PRK06813 2 KIKVVLSGYGTVGREFIKLLNEKYLYINETYGIDLVVSGVLGRNVAIHNEDGLSIHHLLRY-GG-GSCAIEKYIEH-HPE 78 (346)
T ss_pred eeEEEEEecChhHHHHHHHHHHhHHHHHHhcCCcEEEEEEEecchhhccccCCChhhhhhc-cc-cccchhhhhcc-ChH
Confidence 479999999999999999986542 2 33 335566543222 11100 00 00000 0 000 011
Q ss_pred HHHhhcc--CCcEEEEcCCCcc-----cHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEecccc---Cch
Q psy12817 626 NLSGLVR--SADLVVSLLPYNL-----HHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGL---DPG 693 (1201)
Q Consensus 626 ~L~elI~--~~DVVIs~lP~~~-----h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~Gl---DPG 693 (1201)
.+ +.. +.|+||.|+|..+ ....++.|+++|+|+|++. .++....+|.+.|+++|+.+.-|.-+ -|=
T Consensus 79 ~~--~~~~~~~dVvVe~T~s~~~~~e~a~~~~~~aL~~G~hVVTANK~~la~~~~eL~~lA~~~g~~~~yEasVggGiPi 156 (346)
T PRK06813 79 ER--ATDNISGTVLVESTVTNLKDGNPGKQYIKQAIEKKMDIVAISKGALVTNWREINEAAKIANVRIRYSGATAAALPT 156 (346)
T ss_pred HH--hcCCCCCCEEEECCCCccCCchHHHHHHHHHHHCCCeEEcCCcHHHhccHHHHHHHHHHcCCeEEEeeeeeeccch
Confidence 11 111 5899999998542 3567899999999999985 34555678888899999999877533 243
Q ss_pred hHHHHHHHHHHHhhhcCCcEEEEEee
Q psy12817 694 IDHLLAMECIDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 694 IdhmlA~~~idei~~~ggkV~sf~s~ 719 (1201)
|+.+ +....|.+|.++.-.
T Consensus 157 I~~l-------~~~~~g~~I~~i~GI 175 (346)
T PRK06813 157 LDIG-------QFSLAGCHIEKIEGI 175 (346)
T ss_pred HHHH-------hhhcccCcEEEEEEE
Confidence 3332 112245666666543
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0033 Score=71.44 Aligned_cols=76 Identities=14% Similarity=0.165 Sum_probs=60.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH------cCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE------FGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~------~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
..++|+|.| +|++|+.+++.|+++ +++|++..|+.++++.+... .++++.+..|+.| .+.+.++++++|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~ 80 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR-GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE--ESSFEQAIEGCDA 80 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCC--cchHHHHHhCCCE
Confidence 357999999 799999999999987 57888888876654432211 1357888899998 7889999999999
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
||++..
T Consensus 81 vih~A~ 86 (322)
T PLN02986 81 VFHTAS 86 (322)
T ss_pred EEEeCC
Confidence 999985
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0048 Score=73.31 Aligned_cols=99 Identities=18% Similarity=0.170 Sum_probs=69.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHH----HHcCCeeE--EEe
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVT----NEFGRVEA--TLI 617 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La----~~~~~v~~--v~l 617 (1201)
.+..||+|+|+|.+|..++.+|++.+--+++++|.+. .|++.++ +..|.++. ...
T Consensus 40 L~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 119 (392)
T PRK07878 40 LKNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF 119 (392)
T ss_pred HhcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence 4578999999999999999999987655688877532 1333333 22355443 333
Q ss_pred ecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 618 DVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 618 DV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
.+. .+...++++++|+||+|+-. .....+.++|.+.++.+|..+
T Consensus 120 ~i~---~~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p~v~~~ 164 (392)
T PRK07878 120 RLD---PSNAVELFSQYDLILDGTDNFATRYLVNDAAVLAGKPYVWGS 164 (392)
T ss_pred cCC---hhHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 333 34567888999999999843 334557789999999988764
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0039 Score=68.18 Aligned_cols=78 Identities=17% Similarity=0.227 Sum_probs=62.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC----CeeEEEeecCCCCchHHHhhccC----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG----RVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~----~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +++|++.+|+.++++++.+.+. ++..+.+|+.| .+.+++++++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 84 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQA-GAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAE 84 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHh
Confidence 4568999999 699999999999986 5789999999988776655442 36678889998 7778777653
Q ss_pred ---CcEEEEcCCC
Q psy12817 634 ---ADLVVSLLPY 643 (1201)
Q Consensus 634 ---~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 85 ~~~~d~li~~ag~ 97 (255)
T PRK07523 85 IGPIDILVNNAGM 97 (255)
T ss_pred cCCCCEEEECCCC
Confidence 7999999753
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0045 Score=68.62 Aligned_cols=76 Identities=22% Similarity=0.326 Sum_probs=62.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+|+|+|.| +|++|+.+++.|++. +.+|++.+|+.++++.+....+ ++..+.+|++| .+.+.++++ +.|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRID 78 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 36899999 799999999999986 5689999999988887766543 57788999998 777776654 479
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 79 ~vi~~ag~ 86 (276)
T PRK06482 79 VVVSNAGY 86 (276)
T ss_pred EEEECCCC
Confidence 99999754
|
|
| >TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0052 Score=71.46 Aligned_cols=92 Identities=14% Similarity=0.230 Sum_probs=68.7
Q ss_pred EEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEE-------------eecCCCCchHHHhhccC
Q psy12817 568 VLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATL-------------IDVNNGGSDNLSGLVRS 633 (1201)
Q Consensus 568 VLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~-------------lDV~D~~~e~L~elI~~ 633 (1201)
|+|+|+|++|+.+++.+.+.++.+ |.|.|.+++.+..++..+ +...+. +.+. ..+++++.+
T Consensus 1 VaInG~GrIGr~varav~~~~d~elVaVnD~~~~~~a~lA~~l-gyds~~~~~~~~~~~~~~~l~v~----g~~eeLl~~ 75 (333)
T TIGR01546 1 VGVNGYGTIGKRVADAVTKQDDMKLVGVTKTSPDFEAYRAKEL-GIPVYAASEEFIPRFEEAGIEVA----GTLEDLLEK 75 (333)
T ss_pred CEEECCcHHHHHHHHHHhhCCCcEEEEEecCChHHHHHHHHHh-CCCEEeecCCcceEeccCceEec----CCHHHHhhc
Confidence 689999999999999988778888 557888888777777654 211111 1112 236677789
Q ss_pred CcEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 634 ADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 634 ~DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|+|+.|+|...|..-++..+++|+.-|=.+
T Consensus 76 vDiVve~Tp~~~~~~na~~~~~~GakaVl~~ 106 (333)
T TIGR01546 76 VDIVVDATPGGIGAKNKPLYEKAGVKAIFQG 106 (333)
T ss_pred CCEEEECCCCCCChhhHHHHHhCCcCEEEEC
Confidence 9999999999999888888888887655544
|
All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0031 Score=71.60 Aligned_cols=75 Identities=15% Similarity=0.165 Sum_probs=59.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH------cCCeeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE------FGRVEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~------~~~v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
.|+|+|.| +|++|+.+++.|++. +++|++.+|+.++.+..... .++++.+..|+.| .+.+.++++++|+|
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~d~v 81 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFR-GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLD--EGSFELAIDGCETV 81 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCC--chHHHHHHcCCCEE
Confidence 58999999 799999999999986 57888888886654332211 1247788899998 78899999999999
Q ss_pred EEcCC
Q psy12817 638 VSLLP 642 (1201)
Q Consensus 638 Is~lP 642 (1201)
|++..
T Consensus 82 ih~A~ 86 (325)
T PLN02989 82 FHTAS 86 (325)
T ss_pred EEeCC
Confidence 99985
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0055 Score=68.07 Aligned_cols=76 Identities=18% Similarity=0.243 Sum_probs=62.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.+..+++.+.. .++..+.+|+.| .+.+.++++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKH-GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 457899999 799999999999986 578999999988777766554 247788999998 788877765
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 94 ~id~li~~Ag 103 (280)
T PLN02253 94 TLDIMVNNAG 103 (280)
T ss_pred CCCEEEECCC
Confidence 5899999974
|
|
| >PRK05472 redox-sensing transcriptional repressor Rex; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0022 Score=69.78 Aligned_cols=92 Identities=22% Similarity=0.356 Sum_probs=66.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHH-hCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLH-RDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La-~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs 639 (1201)
..++|+|+|+|.+|+.+++++. ...+++ +.++|++++++.... .+.. +.. .+.+.+++++ +|+|+.
T Consensus 83 ~~~rV~IIGaG~iG~~l~~~~~~~~~g~~ivgv~D~d~~~~~~~i---~g~~-----v~~--~~~l~~li~~~~iD~ViI 152 (213)
T PRK05472 83 RTWNVALVGAGNLGRALLNYNGFEKRGFKIVAAFDVDPEKIGTKI---GGIP-----VYH--IDELEEVVKENDIEIGIL 152 (213)
T ss_pred CCcEEEEECCCHHHHHHHHhhhcccCCcEEEEEEECChhhcCCEe---CCeE-----EcC--HHHHHHHHHHCCCCEEEE
Confidence 3579999999999999998753 345677 457888876553221 1222 122 4567777764 999999
Q ss_pred cCCCcccHHHHHHHHHcCC-eEEEccC
Q psy12817 640 LLPYNLHHHVAEFCIQHGK-NLVTASY 665 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGk-h~VD~Sy 665 (1201)
|+|...|.+++..|+++|+ ++++.+.
T Consensus 153 a~P~~~~~~i~~~l~~~Gi~~il~~~p 179 (213)
T PRK05472 153 TVPAEAAQEVADRLVEAGIKGILNFAP 179 (213)
T ss_pred eCCchhHHHHHHHHHHcCCCEEeecCc
Confidence 9999999999999999995 6666654
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.005 Score=68.59 Aligned_cols=76 Identities=18% Similarity=0.195 Sum_probs=62.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+++|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++++.+....+ ++..+.+|+.| .+.+.++++ ..|
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAA-GHRVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhC-cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCCC
Confidence 57899999 699999999999986 5789999999998887766542 47778899998 777777665 479
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999753
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0044 Score=70.67 Aligned_cols=77 Identities=16% Similarity=0.215 Sum_probs=63.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
..+++|+|.| +|.+|..+++.|++.+ .+|++++|+.++++++.... .++..+.+|++| .+.+.+++++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 80 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRG-WHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRAL 80 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHh
Confidence 3568899999 7999999999999874 78999999999887776554 246788899998 7777776653
Q ss_pred ---CcEEEEcCC
Q psy12817 634 ---ADLVVSLLP 642 (1201)
Q Consensus 634 ---~DVVIs~lP 642 (1201)
.|+||++..
T Consensus 81 ~~~iD~li~nAg 92 (322)
T PRK07453 81 GKPLDALVCNAA 92 (322)
T ss_pred CCCccEEEECCc
Confidence 899999975
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.005 Score=69.69 Aligned_cols=77 Identities=18% Similarity=0.292 Sum_probs=63.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
..++|+|.| +|.+|+.+++.|+++ +.+|++++|+.++++++.+.. ..+..+.+|+.| .+.+.++++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~-G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARR-GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRI 115 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 348899999 699999999999986 579999999998887776543 235678899998 777777766
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 116 g~id~li~~AG~ 127 (293)
T PRK05866 116 GGVDILINNAGR 127 (293)
T ss_pred CCCCEEEECCCC
Confidence 68999999753
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0043 Score=68.52 Aligned_cols=78 Identities=14% Similarity=0.229 Sum_probs=63.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++..... ++.++.+|++| .+++.++++ .
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGR 80 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCC
Confidence 3468999999 699999999999986 5799999999988888776653 47788999998 777776665 4
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 81 id~lv~~ag~ 90 (261)
T PRK08265 81 VDILVNLACT 90 (261)
T ss_pred CCEEEECCCC
Confidence 6999999753
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0035 Score=71.79 Aligned_cols=77 Identities=17% Similarity=0.342 Sum_probs=59.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-----HHcCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVT-----NEFGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La-----~~~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.++++|+|.| +|++|+.+++.|.+. +++|++.+|+.+...... ...+++..+..|+.| .+.+.++++++|+
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d~ 83 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK-GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTD--EESFEAPIAGCDL 83 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCC--hHHHHHHHhcCCE
Confidence 4578999999 899999999999987 468877777754332211 112357788899998 7889999999999
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
||++..
T Consensus 84 vih~A~ 89 (338)
T PLN00198 84 VFHVAT 89 (338)
T ss_pred EEEeCC
Confidence 999984
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0028 Score=74.27 Aligned_cols=93 Identities=23% Similarity=0.230 Sum_probs=61.1
Q ss_pred ccccCCCeEEEE----c-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH-------H--cCCeeEEEeecCCCCch
Q psy12817 560 IQTEESRNVLLL----G-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTN-------E--FGRVEATLIDVNNGGSD 625 (1201)
Q Consensus 560 ~~~~~mkKVLIL----G-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~-------~--~~~v~~v~lDV~D~~~e 625 (1201)
.....++||+|+ | +|++|+.+++.|.+. +++|++.+|+.+..+.+.. . ..+++.+..|+.|
T Consensus 47 ~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---- 121 (378)
T PLN00016 47 AAAVEKKKVLIVNTNSGGHAFIGFYLAKELVKA-GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---- 121 (378)
T ss_pred hcccccceEEEEeccCCCceeEhHHHHHHHHHC-CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH----
Confidence 335567899999 8 699999999999987 5899999998765432210 1 1247777777754
Q ss_pred HHHhhc--cCCcEEEEcCCCcc--cHHHHHHHHHcCC
Q psy12817 626 NLSGLV--RSADLVVSLLPYNL--HHHVAEFCIQHGK 658 (1201)
Q Consensus 626 ~L~elI--~~~DVVIs~lP~~~--h~~VakacIeaGk 658 (1201)
+.+++ .++|+||++..... ...++++|.++|+
T Consensus 122 -~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gv 157 (378)
T PLN00016 122 -VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGL 157 (378)
T ss_pred -HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 44443 46899999864221 2334444444443
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0047 Score=67.23 Aligned_cols=75 Identities=13% Similarity=0.330 Sum_probs=60.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhccC---
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVRS--- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~~--- 633 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.... + .+.++.+|++| .+++.+++++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 358999999 699999999999986 578999999998887665443 1 24456889998 7888777764
Q ss_pred ----CcEEEEcC
Q psy12817 634 ----ADLVVSLL 641 (1201)
Q Consensus 634 ----~DVVIs~l 641 (1201)
.|+||++.
T Consensus 80 ~~~~id~vi~~A 91 (256)
T PRK09186 80 KYGKIDGAVNCA 91 (256)
T ss_pred HcCCccEEEECC
Confidence 79999997
|
|
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0038 Score=65.63 Aligned_cols=77 Identities=19% Similarity=0.238 Sum_probs=54.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.|+|+|||+|..|++.+..|.+. +++|+|..|..++-.+.++.- +.+ + ..+.++++++|+|+.++|.
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDS-G~~V~Vglr~~s~s~~~A~~~-Gf~-----v-----~~~~eAv~~aDvV~~L~PD 70 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDS-GVNVIVGLREGSASWEKAKAD-GFE-----V-----MSVAEAVKKADVVMLLLPD 70 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHC-C-EEEEEE-TTCHHHHHHHHT-T-E-----C-----CEHHHHHHC-SEEEE-S-H
T ss_pred CCCEEEEECCChHHHHHHHHHHhC-CCCEEEEecCCCcCHHHHHHC-CCe-----e-----ccHHHHHhhCCEEEEeCCh
Confidence 578999999999999999999876 689999998877554445443 433 2 2467788899999999998
Q ss_pred cccHHHHHH
Q psy12817 644 NLHHHVAEF 652 (1201)
Q Consensus 644 ~~h~~Vaka 652 (1201)
..+.++-+.
T Consensus 71 ~~q~~vy~~ 79 (165)
T PF07991_consen 71 EVQPEVYEE 79 (165)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888777543
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0071 Score=69.31 Aligned_cols=76 Identities=24% Similarity=0.263 Sum_probs=53.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH-------c--CCe-e-------EEEeecCCCCchHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE-------F--GRV-E-------ATLIDVNNGGSDNL 627 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~-------~--~~v-~-------~v~lDV~D~~~e~L 627 (1201)
+++|+|||+|.||..++..|++. +++|++.|++++.+++.... . .+. . .-.+.+. .++
T Consensus 2 ~~~V~VIG~G~mG~~iA~~la~~-G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~----~~~ 76 (308)
T PRK06129 2 MGSVAIIGAGLIGRAWAIVFARA-GHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVT----DSL 76 (308)
T ss_pred CcEEEEECccHHHHHHHHHHHHC-CCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEE----CcH
Confidence 46899999999999999999987 57999999998876653211 0 010 0 0001122 246
Q ss_pred HhhccCCcEEEEcCCCcc
Q psy12817 628 SGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 628 ~elI~~~DVVIs~lP~~~ 645 (1201)
.+.++++|+|+.|+|...
T Consensus 77 ~~a~~~ad~Vi~avpe~~ 94 (308)
T PRK06129 77 ADAVADADYVQESAPENL 94 (308)
T ss_pred HHhhCCCCEEEECCcCCH
Confidence 677889999999999763
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0088 Score=68.33 Aligned_cols=77 Identities=21% Similarity=0.413 Sum_probs=55.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH----cCCeeE--------EEeecCCCCchHHHhhc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE----FGRVEA--------TLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~----~~~v~~--------v~lDV~D~~~e~L~elI 631 (1201)
.++||.|||+|.||..++..|++. +++|+++|++.++++++.+. .+.... ..+... .++.+.+
T Consensus 3 ~~~~I~vIGaG~mG~~iA~~l~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~ 77 (311)
T PRK06130 3 PIQNLAIIGAGTMGSGIAALFARK-GLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRME----AGLAAAV 77 (311)
T ss_pred CccEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEe----CCHHHHh
Confidence 357999999999999999999875 57899999999888776542 110000 001112 2355667
Q ss_pred cCCcEEEEcCCCcc
Q psy12817 632 RSADLVVSLLPYNL 645 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~ 645 (1201)
+++|+||.|+|...
T Consensus 78 ~~aDlVi~av~~~~ 91 (311)
T PRK06130 78 SGADLVIEAVPEKL 91 (311)
T ss_pred ccCCEEEEeccCcH
Confidence 89999999998764
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0063 Score=69.77 Aligned_cols=96 Identities=20% Similarity=0.245 Sum_probs=63.7
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC---------------------HHHHH----HHHHHcCCeeE--EEeec
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLL---------------------KEDID----KVTNEFGRVEA--TLIDV 619 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~---------------------~ekAe----~La~~~~~v~~--v~lDV 619 (1201)
||+|+|+|.+|..++++|++.+--+++++|.+ ..|++ ++.+..|.++. +...+
T Consensus 1 kVLIvGaGGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~I 80 (307)
T cd01486 1 KCLLLGAGTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLSI 80 (307)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeeec
Confidence 69999999999999999999865567777632 11232 23333455443 32222
Q ss_pred ---------------CCCCchHHHhhccCCcEEEEcCCCcc-cHHHHHHHHHcCCeEEEc
Q psy12817 620 ---------------NNGGSDNLSGLVRSADLVVSLLPYNL-HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 620 ---------------~D~~~e~L~elI~~~DVVIs~lP~~~-h~~VakacIeaGkh~VD~ 663 (1201)
.. +.+.+.++++++|+|+.|+...- ...+...|.+.++.+++.
T Consensus 81 pmpgh~~~~~~~~~~~~-~~~~l~~li~~~DvV~d~tDn~esR~L~~~~~~~~~k~~I~a 139 (307)
T cd01486 81 PMPGHPISESEVPSTLK-DVKRLEELIKDHDVIFLLTDSRESRWLPTLLSAAKNKLVINA 139 (307)
T ss_pred ccccccccccccccccc-CHHHHHHHHhhCCEEEECCCCHHHHHHHHHHHHHhCCcEEEE
Confidence 11 25678899999999999995432 344566777777777764
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.011 Score=67.64 Aligned_cols=77 Identities=17% Similarity=0.260 Sum_probs=57.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH----HHHHHHHH----cCCeeEEEeecCCCCchHHHhhcc--
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE----DIDKVTNE----FGRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e----kAe~La~~----~~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
++++|+|.| +|++|+.+++.|.+. +.+|++.+|... ..+++... .++++.+..|+.| .+.+.++++
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~l~~~~~~~ 80 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLA-GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRD--KEALEKVFAST 80 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCC--HHHHHHHHHhC
Confidence 458999999 699999999999986 478988886421 12222221 1257788899998 888888876
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
++|.||+|...
T Consensus 81 ~~d~vih~a~~ 91 (352)
T PLN02240 81 RFDAVIHFAGL 91 (352)
T ss_pred CCCEEEEcccc
Confidence 58999999753
|
|
| >PRK08507 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0083 Score=67.52 Aligned_cols=94 Identities=11% Similarity=0.113 Sum_probs=64.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
+||+|||+|.||..++..|.+.+. .+|++.||++++++.+.+ . ++. |... ...++. ++|+||.|+|..
T Consensus 1 m~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~-~-g~~----~~~~----~~~~~~-~aD~Vilavp~~ 69 (275)
T PRK08507 1 MKIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKALE-L-GLV----DEIV----SFEELK-KCDVIFLAIPVD 69 (275)
T ss_pred CEEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHH-C-CCC----cccC----CHHHHh-cCCEEEEeCcHH
Confidence 489999999999999999987643 468889999988877543 3 221 1111 233333 499999999987
Q ss_pred ccHHHHHHH--HHcCCeEEEccCChHHH
Q psy12817 645 LHHHVAEFC--IQHGKNLVTASYLSPEM 670 (1201)
Q Consensus 645 ~h~~Vakac--IeaGkh~VD~Syvs~e~ 670 (1201)
....+++.. +..++-++|.+-+....
T Consensus 70 ~~~~~~~~l~~l~~~~iv~d~gs~k~~i 97 (275)
T PRK08507 70 AIIEILPKLLDIKENTTIIDLGSTKAKI 97 (275)
T ss_pred HHHHHHHHHhccCCCCEEEECccchHHH
Confidence 665655543 34566677776554443
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0057 Score=67.58 Aligned_cols=78 Identities=17% Similarity=0.316 Sum_probs=59.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~~-----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
..++|+|.| +|.+|+.+++.|++.++.+|++.+|+.++ ++++.++. .++..+.+|+.| .+++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~ 84 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD--TDSHPKVIDAAFA 84 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC--hHHHHHHHHHHHh
Confidence 457899999 79999999999998877899999998775 55544332 257788999998 666544433
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|++|++...
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 68999988754
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0038 Score=63.32 Aligned_cols=88 Identities=17% Similarity=0.179 Sum_probs=62.2
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCc-ccccccccCcccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGG-YDYQEYNENPSLY 270 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~-f~~~ey~~~pe~y 270 (1201)
++.-.+++|+|+|-+|+.++..+..+|+. .+.++.....+.+.+....++. +... .|
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~---------------~i~i~nRt~~ra~~l~~~~~~~~~~~~-------~~ 66 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAK---------------EITIVNRTPERAEALAEEFGGVNIEAI-------PL 66 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSS---------------EEEEEESSHHHHHHHHHHHTGCSEEEE-------EG
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCC---------------EEEEEECCHHHHHHHHHHcCcccccee-------eH
Confidence 45678999999999999999999999854 4678877777766666655321 2211 12
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhc
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKN 306 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~ 306 (1201)
... .+.++.+|+||||.-.+.. ++++++++.
T Consensus 67 ~~~--~~~~~~~DivI~aT~~~~~---~i~~~~~~~ 97 (135)
T PF01488_consen 67 EDL--EEALQEADIVINATPSGMP---IITEEMLKK 97 (135)
T ss_dssp GGH--CHHHHTESEEEE-SSTTST---SSTHHHHTT
T ss_pred HHH--HHHHhhCCeEEEecCCCCc---ccCHHHHHH
Confidence 111 1356689999999887644 899999877
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.013 Score=66.30 Aligned_cols=75 Identities=15% Similarity=0.220 Sum_probs=57.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH--HHHHHHHHc----CCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE--DIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e--kAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
+.++|+|.| +|++|+.+++.|+++ +++|++..|+.+ +........ .++..+..|++| .+.+.+.+.++|.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d--~~~~~~~l~~~d~ 81 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSR-GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLD--YHSILDALKGCSG 81 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCC--HHHHHHHHcCCCE
Confidence 457899999 699999999999986 578988888532 222222222 257788899998 7889999999999
Q ss_pred EEEcC
Q psy12817 637 VVSLL 641 (1201)
Q Consensus 637 VIs~l 641 (1201)
|+.+.
T Consensus 82 v~~~~ 86 (297)
T PLN02583 82 LFCCF 86 (297)
T ss_pred EEEeC
Confidence 99765
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0052 Score=67.27 Aligned_cols=78 Identities=21% Similarity=0.253 Sum_probs=61.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.++|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++..... ++.++.+|++| .+++.++++ .
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGR 84 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCC
Confidence 4568999999 799999999999987 4789999999888777665542 46788999998 676655443 3
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 85 id~li~~ag~ 94 (255)
T PRK05717 85 LDALVCNAAI 94 (255)
T ss_pred CCEEEECCCc
Confidence 6999999853
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0064 Score=76.89 Aligned_cols=90 Identities=24% Similarity=0.253 Sum_probs=69.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||+|.| +|++|+.+++.|.+. +++|++.+|..... ..++++++..|+.| . .+.+++.++|+||+|.+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~-G~~Vi~ldr~~~~~-----~~~~ve~v~~Dl~d--~-~l~~al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA-GHTVSGIAQHPHDA-----LDPRVDYVCASLRN--P-VLQELAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCEEEEEeCChhhc-----ccCCceEEEccCCC--H-HHHHHhcCCCEEEEcCccC
Confidence 4899999 799999999999886 57899999875431 12467888999987 5 4778888999999999643
Q ss_pred c----------cHHHHHHHHHcCCeEEEcc
Q psy12817 645 L----------HHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 645 ~----------h~~VakacIeaGkh~VD~S 664 (1201)
. ...++++|.++|+.+|-+|
T Consensus 72 ~~~~~~vNv~Gt~nLleAA~~~GvRiV~~S 101 (699)
T PRK12320 72 TSAPGGVGITGLAHVANAAARAGARLLFVS 101 (699)
T ss_pred ccchhhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 1 1346788888888776655
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0069 Score=65.69 Aligned_cols=77 Identities=19% Similarity=0.325 Sum_probs=62.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++...... .++..+.+|++| .+.+.++++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG 80 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHC-CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 457999999 699999999999987 578999999988776665543 246788899998 778777654
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~id~vi~~ag~ 91 (252)
T PRK06138 81 RLDVLVNNAGF 91 (252)
T ss_pred CCCEEEECCCC
Confidence 68999999864
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0071 Score=65.69 Aligned_cols=76 Identities=14% Similarity=0.280 Sum_probs=62.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+++|+|.| +|.+|+.+++.|.++ +.+|++.+|+.++.+++.... .++..+.+|+.| .+.+.++++
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKE-GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETFG 80 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 47899999 799999999999986 578999999998877665543 357788999998 777777665
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 57999999853
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0083 Score=65.36 Aligned_cols=76 Identities=13% Similarity=0.215 Sum_probs=61.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-CCcEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-SADLVV 638 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-~~DVVI 638 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.... .++..+.+|+.| .+.+.+++. +.|+||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~id~vi 78 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK-GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--AIDRAQAAEWDVDVLL 78 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--HHHHHHHhcCCCCEEE
Confidence 46899999 699999999999986 578999999988776665432 247788899998 788887776 799999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 79 ~~ag~ 83 (257)
T PRK09291 79 NNAGI 83 (257)
T ss_pred ECCCc
Confidence 99753
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.007 Score=65.31 Aligned_cols=76 Identities=16% Similarity=0.225 Sum_probs=63.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---CCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---SADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---~~DVVIs 639 (1201)
+.++++|.| +|.+|+.+++.|++. +++|++++|+.++++++.... +...+..|++| .+.+.++++ ..|+||+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~~--~~~v~~~~~~~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQR-GARVVAAARNAAALDRLAGET-GCEPLRLDVGD--DAAIRAALAAAGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh-CCeEEEecCCC--HHHHHHHHHHhCCCCEEEE
Confidence 357999999 599999999999987 578999999999888887665 46778899998 777777765 4799999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9854
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.005 Score=68.29 Aligned_cols=74 Identities=20% Similarity=0.320 Sum_probs=60.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~DV 636 (1201)
||+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++.+... ++..+.+|++| .+.+.++++ +.|+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~--~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA-GYEVWATARKAEDVEALAAA--GFTAVQLDVND--GAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHC--CCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCE
Confidence 68899999 699999999999876 57899999999887776542 56788899998 777776653 5799
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 76 vi~~ag~ 82 (274)
T PRK05693 76 LINNAGY 82 (274)
T ss_pred EEECCCC
Confidence 9999854
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0046 Score=68.98 Aligned_cols=74 Identities=20% Similarity=0.295 Sum_probs=60.4
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--------CCc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--------SAD 635 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--------~~D 635 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++.+... ++..+.+|++| .+++.++++ ..|
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~-G~~Vi~~~r~~~~~~~l~~~--~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSD-GWRVFATCRKEEDVAALEAE--GLEAFQLDYAE--PESIAALVAQVLELSGGRLD 78 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHC--CceEEEccCCC--HHHHHHHHHHHHHHcCCCcc
Confidence 57899999 599999999999886 57899999999988877653 57888999998 777665554 369
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 79 ~li~~Ag~ 86 (277)
T PRK05993 79 ALFNNGAY 86 (277)
T ss_pred EEEECCCc
Confidence 99999753
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0068 Score=66.31 Aligned_cols=77 Identities=13% Similarity=0.288 Sum_probs=62.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|.+++|+.++++++...+ .++..+.+|++| .+.+.++++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEA-GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 458899999 599999999999986 578999999998888776553 246678899998 777776654
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 68999999753
|
|
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0042 Score=72.18 Aligned_cols=77 Identities=17% Similarity=0.197 Sum_probs=57.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
..+.++|+|||+|.+|++++..|... +++|++.+++.++..+.+... ++.. . ...++++++|+|+.++
T Consensus 14 ~L~gktIgIIG~GsmG~AlA~~L~~s-G~~Vvv~~r~~~~s~~~A~~~-G~~~-----~-----s~~eaa~~ADVVvLaV 81 (330)
T PRK05479 14 LIKGKKVAIIGYGSQGHAHALNLRDS-GVDVVVGLREGSKSWKKAEAD-GFEV-----L-----TVAEAAKWADVIMILL 81 (330)
T ss_pred hhCCCEEEEEeeHHHHHHHHHHHHHC-CCEEEEEECCchhhHHHHHHC-CCee-----C-----CHHHHHhcCCEEEEcC
Confidence 45678999999999999999999876 578888888766555555543 3331 1 3566778999999999
Q ss_pred CCcccHHHH
Q psy12817 642 PYNLHHHVA 650 (1201)
Q Consensus 642 P~~~h~~Va 650 (1201)
|...+..+.
T Consensus 82 Pd~~~~~V~ 90 (330)
T PRK05479 82 PDEVQAEVY 90 (330)
T ss_pred CHHHHHHHH
Confidence 976655554
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0053 Score=67.59 Aligned_cols=76 Identities=16% Similarity=0.215 Sum_probs=61.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++++|+.++++++....+ ++..+.+|+.| .+++.++++ ..
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAE-GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 468999999 699999999999986 5789999999988888776542 46778899998 666666554 46
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|++|++..
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999974
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0057 Score=71.66 Aligned_cols=78 Identities=14% Similarity=0.231 Sum_probs=62.5
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH---------cCCeeEEEeecCCCCchHHHhhc
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE---------FGRVEATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~---------~~~v~~v~lDV~D~~~e~L~elI 631 (1201)
..++|+|+|.| +|++|+.+++.|++. +++|++..|+.++++.+... .+++.++..|+.| .+.+.+++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~-G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d--~~~l~~~i 126 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRH-GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTE--PESLHEAF 126 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCC--HHHHHHHH
Confidence 35678999999 699999999999987 57888888887766555321 0246788899998 88899999
Q ss_pred cCCcEEEEcCC
Q psy12817 632 RSADLVVSLLP 642 (1201)
Q Consensus 632 ~~~DVVIs~lP 642 (1201)
+++|.|+.+..
T Consensus 127 ~~~d~V~hlA~ 137 (367)
T PLN02686 127 DGCAGVFHTSA 137 (367)
T ss_pred HhccEEEecCe
Confidence 99999998753
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0075 Score=66.08 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=61.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+.++|+|+| +|.+|..+++.|++. +.+|++++|+..+++++.+... ...+.+|+.| .+.+.++++ +.|
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~-~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADEVG-GLFVPTDVTD--EDAVNALFDTAAETYGSVD 81 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcC-CcEEEeeCCC--HHHHHHHHHHHHHHcCCCC
Confidence 468999999 699999999999986 5789999999988877766553 3678899998 777776665 469
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 82 ~vi~~ag~ 89 (255)
T PRK06057 82 IAFNNAGI 89 (255)
T ss_pred EEEECCCc
Confidence 99998753
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0044 Score=67.52 Aligned_cols=76 Identities=24% Similarity=0.297 Sum_probs=61.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++|+|.| +|.+|+.+++.|+++ +.+|++++|+.++++++.... .++..+.+|++| .+.++.+++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARA-GADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence 458999999 699999999999987 578999999998877766543 246788999998 777766553
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 81 g~~d~vi~~ag 91 (258)
T PRK07890 81 GRVDALVNNAF 91 (258)
T ss_pred CCccEEEECCc
Confidence 5799999974
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.007 Score=65.32 Aligned_cols=77 Identities=22% Similarity=0.309 Sum_probs=60.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++|+|.| +|.+|+.+++.|+++ +++|++.+|+.++.+.+...+ .++..+.+|+.| .+.+.++++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAAD-GAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRD--RAALKAAVAAGVEDF 81 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 457899999 799999999999987 578999999977665544332 347788899998 778877765
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
.+|+||++...
T Consensus 82 ~~~d~vi~~ag~ 93 (251)
T PRK12826 82 GRLDILVANAGI 93 (251)
T ss_pred CCCCEEEECCCC
Confidence 58999999853
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0083 Score=65.07 Aligned_cols=76 Identities=17% Similarity=0.181 Sum_probs=52.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC---HH---------------HHHHHHHH----cCCe--eEEEee
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL---KE---------------DIDKVTNE----FGRV--EATLID 618 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~---~e---------------kAe~La~~----~~~v--~~v~lD 618 (1201)
.+.+||+|+|+|.+|..++.+|++.+--+++++|++ .+ +++.+++. .|.+ .....+
T Consensus 19 L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~ 98 (200)
T TIGR02354 19 LEQATVAICGLGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK 98 (200)
T ss_pred HhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence 557899999999999999999999765479999987 22 22222221 2333 333334
Q ss_pred cCCCCchHHHhhccCCcEEEEcC
Q psy12817 619 VNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 619 V~D~~~e~L~elI~~~DVVIs~l 641 (1201)
++ .+.+.++++++|+||.|+
T Consensus 99 i~---~~~~~~~~~~~DlVi~a~ 118 (200)
T TIGR02354 99 IT---EENIDKFFKDADIVCEAF 118 (200)
T ss_pred CC---HhHHHHHhcCCCEEEECC
Confidence 43 356777888899999995
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.013 Score=72.46 Aligned_cols=128 Identities=14% Similarity=0.178 Sum_probs=86.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~ 643 (1201)
..+|+|+|+|.+|+.+++.|.++ +.++++.|.|+++++++.+ . +...+..|.+| ++.++++ ++++|.|+.+++.
T Consensus 417 ~~hiiI~G~G~~G~~la~~L~~~-g~~vvvId~d~~~~~~~~~-~-g~~~i~GD~~~--~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 417 CNHALLVGYGRVGSLLGEKLLAA-GIPLVVIETSRTRVDELRE-R-GIRAVLGNAAN--EEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCCEEEECCChHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHH-C-CCeEEEcCCCC--HHHHHhcCccccCEEEEEcCC
Confidence 47899999999999999999876 4789999999999998865 3 68899999998 7777644 6789999999886
Q ss_pred cccH-HHHHHHHHc--CCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhh
Q psy12817 644 NLHH-HVAEFCIQH--GKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAH 707 (1201)
Q Consensus 644 ~~h~-~VakacIea--Gkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~ 707 (1201)
.... .++..+.+. .++.+.-....++.+. .+++|+..+. +| ....+.+..+.+.
T Consensus 492 ~~~~~~iv~~~~~~~~~~~iiar~~~~~~~~~----l~~~Gad~vv----~p--~~~~a~~i~~~l~ 548 (558)
T PRK10669 492 GYEAGEIVASAREKRPDIEIIARAHYDDEVAY----ITERGANQVV----MG--EREIARTMLELLE 548 (558)
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEECCHHHHHH----HHHcCCCEEE----Ch--HHHHHHHHHHHhc
Confidence 5432 333333332 2334433322222222 3567775443 22 3445555555553
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0076 Score=64.43 Aligned_cols=72 Identities=21% Similarity=0.391 Sum_probs=56.3
Q ss_pred EEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCC--cEEEEcCCC
Q psy12817 568 VLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSA--DLVVSLLPY 643 (1201)
Q Consensus 568 VLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~--DVVIs~lP~ 643 (1201)
|+|+| +|++|+.+++.|.+++ .+|+...|............ +++.+..|+.| .+.+.+++++. |+||++...
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~~~~~~-~~~~~~~dl~~--~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKG-HEVIVLSRSSNSESFEEKKL-NVEFVIGDLTD--KEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-TEEEEEESCSTGGHHHHHHT-TEEEEESETTS--HHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcC-Cccccccccccccccccccc-eEEEEEeeccc--cccccccccccCceEEEEeecc
Confidence 79999 7999999999999875 55666666555443333322 68899999998 88999999877 999999854
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0033 Score=73.30 Aligned_cols=92 Identities=16% Similarity=0.167 Sum_probs=63.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
+|+||+|+| +|++|+.+++.|.+ .+..++..+......-+.+. +.+ ..+++.+ .+. .+ ++++|+|+.|
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~--~~~---~~l~~~~--~~~-~~-~~~vD~vFla 73 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP--FAG---KNLRVRE--VDS-FD-FSQVQLAFFA 73 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec--cCC---cceEEee--CCh-HH-hcCCCEEEEc
Confidence 468999999 69999999999994 46666554432222112221 222 2234433 222 22 3789999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|.....+++..+.++|+.+||.|
T Consensus 74 ~p~~~s~~~v~~~~~~G~~VIDlS 97 (336)
T PRK05671 74 AGAAVSRSFAEKARAAGCSVIDLS 97 (336)
T ss_pred CCHHHHHHHHHHHHHCCCeEEECc
Confidence 998777889999999999999997
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0051 Score=71.76 Aligned_cols=93 Identities=16% Similarity=0.218 Sum_probs=66.0
Q ss_pred cCCCeEEEEcC-chhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLGA-GYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILGA-G~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.+.++|+|+|+ |.||+.+++.|... +..++++++|+.+++..++.++.. .+ ...+.+.+.++|+||++
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-----~~-----i~~l~~~l~~aDiVv~~ 222 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-----GK-----ILSLEEALPEADIVVWV 222 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-----cc-----HHhHHHHHccCCEEEEC
Confidence 56789999997 99999999999864 335799999999999998876532 12 23466788899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+.......+-..-++.+.-++|+++
T Consensus 223 ts~~~~~~I~~~~l~~~~~viDiAv 247 (340)
T PRK14982 223 ASMPKGVEIDPETLKKPCLMIDGGY 247 (340)
T ss_pred CcCCcCCcCCHHHhCCCeEEEEecC
Confidence 8432111111223356666777764
|
|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0065 Score=78.51 Aligned_cols=101 Identities=16% Similarity=0.200 Sum_probs=72.3
Q ss_pred ccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHH----cCCeeEEE
Q psy12817 560 IQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNE----FGRVEATL 616 (1201)
Q Consensus 560 ~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~----~~~v~~v~ 616 (1201)
++..+..||+|+|+|.+|..++.+|++.+--+++++|.+. .|++.+++. .|.++...
T Consensus 327 Q~kL~~srVlVvGlGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~ 406 (989)
T PRK14852 327 QRRLLRSRVAIAGLGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRS 406 (989)
T ss_pred HHHHhcCcEEEECCcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEE
Confidence 3456689999999999999999999998655677776431 133333332 24444333
Q ss_pred e--ecCCCCchHHHhhccCCcEEEEcCCCcc---cHHHHHHHHHcCCeEEEc
Q psy12817 617 I--DVNNGGSDNLSGLVRSADLVVSLLPYNL---HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 617 l--DV~D~~~e~L~elI~~~DVVIs~lP~~~---h~~VakacIeaGkh~VD~ 663 (1201)
. .+. .+.+.++++++|+||+|+-+.. ...+...|.+.|+.+|+.
T Consensus 407 ~~~~I~---~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP~I~a 455 (989)
T PRK14852 407 FPEGVA---AETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELGIPVITA 455 (989)
T ss_pred EecCCC---HHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcCCCEEEe
Confidence 3 343 5678899999999999996422 256778899999999986
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.006 Score=70.51 Aligned_cols=86 Identities=16% Similarity=0.187 Sum_probs=64.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCC----CCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNN----GGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D----~~~e~L~elI~~~DVVIs~ 640 (1201)
|+||.|||+|..|.+++..|++++ ++|++-.|+++-++++.....|.++.. ++.- .-..++.++++++|+|+..
T Consensus 1 ~~kI~ViGaGswGTALA~~la~ng-~~V~lw~r~~~~~~~i~~~~~N~~yLp-~i~lp~~l~at~Dl~~a~~~ad~iv~a 78 (329)
T COG0240 1 MMKIAVIGAGSWGTALAKVLARNG-HEVRLWGRDEEIVAEINETRENPKYLP-GILLPPNLKATTDLAEALDGADIIVIA 78 (329)
T ss_pred CceEEEEcCChHHHHHHHHHHhcC-CeeEEEecCHHHHHHHHhcCcCccccC-CccCCcccccccCHHHHHhcCCEEEEE
Confidence 589999999999999999999875 789999999999988876532322211 1110 0024688889999999999
Q ss_pred CCCcccHHHHHH
Q psy12817 641 LPYNLHHHVAEF 652 (1201)
Q Consensus 641 lP~~~h~~Vaka 652 (1201)
+|.....++++.
T Consensus 79 vPs~~~r~v~~~ 90 (329)
T COG0240 79 VPSQALREVLRQ 90 (329)
T ss_pred CChHHHHHHHHH
Confidence 998776666554
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0091 Score=65.10 Aligned_cols=78 Identities=18% Similarity=0.277 Sum_probs=63.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++.+...+ .++..+.+|+++ .+.+.++++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 83 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD--YQSIKAAVAHAETE 83 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHh
Confidence 3458999999 699999999999986 578999999999887776543 246788899998 777777765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 84 ~~~~d~li~~ag~ 96 (258)
T PRK06949 84 AGTIDILVNNSGV 96 (258)
T ss_pred cCCCCEEEECCCC
Confidence 47999999853
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.015 Score=61.99 Aligned_cols=90 Identities=16% Similarity=0.307 Sum_probs=69.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
|+++|+| +|.++ .+++.|++. +++|.+.+|+.++++.+.... .++.++.+|+.| .+++.++++ ..
T Consensus 1 m~vlVtGGtG~gg-~la~~L~~~-G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d--~~sv~~~i~~~l~~~g~i 76 (177)
T PRK08309 1 MHALVIGGTGMLK-RVSLWLCEK-GFHVSVIARREVKLENVKRESTTPESITPLPLDYHD--DDALKLAIKSTIEKNGPF 76 (177)
T ss_pred CEEEEECcCHHHH-HHHHHHHHC-cCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 4799999 56554 599999886 578999999998887766533 246778889998 777776664 36
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCe
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKN 659 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh 659 (1201)
|++|+.+-......++++|-+.|++
T Consensus 77 d~lv~~vh~~~~~~~~~~~~~~gv~ 101 (177)
T PRK08309 77 DLAVAWIHSSAKDALSVVCRELDGS 101 (177)
T ss_pred eEEEEeccccchhhHHHHHHHHccC
Confidence 7888888777777788888888876
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0082 Score=66.07 Aligned_cols=77 Identities=18% Similarity=0.217 Sum_probs=63.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+..+ ++..+.+|+.| .+.++++++ ..
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAE-GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence 457999999 699999999999986 5789999999999888877654 36788899998 777766654 47
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|++|++...
T Consensus 82 d~li~~ag~ 90 (263)
T PRK06200 82 DCFVGNAGI 90 (263)
T ss_pred CEEEECCCC
Confidence 999999853
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0064 Score=70.53 Aligned_cols=77 Identities=8% Similarity=0.115 Sum_probs=55.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---------Cee----EEEeecCCCCchHHHhhc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---------RVE----ATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---------~v~----~v~lDV~D~~~e~L~elI 631 (1201)
.++|+|||+|.||+.++..++.. +++|++.|++++.+++..+... +.. .-.+.. ...+++.+
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~a-G~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~----~~~l~~av 81 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAH-GLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF----VATIEACV 81 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee----cCCHHHHh
Confidence 57999999999999999999875 7999999999886655332110 000 001111 23577888
Q ss_pred cCCcEEEEcCCCccc
Q psy12817 632 RSADLVVSLLPYNLH 646 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~h 646 (1201)
+++|+||.|+|-...
T Consensus 82 ~~aDlViEavpE~l~ 96 (321)
T PRK07066 82 ADADFIQESAPEREA 96 (321)
T ss_pred cCCCEEEECCcCCHH
Confidence 999999999997653
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0047 Score=70.05 Aligned_cols=60 Identities=23% Similarity=0.283 Sum_probs=48.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~lP 642 (1201)
|||+|.| +|++|+.+++.|.+++ +|++.+|... .+..|+.| .+.+.++++ ++|+||+|..
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g--~V~~~~~~~~-------------~~~~Dl~d--~~~~~~~~~~~~~D~Vih~Aa 63 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG--NLIALDVHST-------------DYCGDFSN--PEGVAETVRKIRPDVIVNAAA 63 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC--CEEEeccccc-------------cccCCCCC--HHHHHHHHHhcCCCEEEECCc
Confidence 5899999 6999999999998875 5777777521 23468888 888888888 4899999974
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0055 Score=65.65 Aligned_cols=76 Identities=17% Similarity=0.316 Sum_probs=60.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS------ 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~------ 633 (1201)
+++|+|.| +|.+|+.+++.|.++ +.+|++.+|+.++.+.+.... .++..+..|+.| .+.+.+++++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAAD-GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence 47999999 699999999999987 567999999988876655433 246677899998 7777766654
Q ss_pred -CcEEEEcCCC
Q psy12817 634 -ADLVVSLLPY 643 (1201)
Q Consensus 634 -~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 5999999753
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0072 Score=65.08 Aligned_cols=78 Identities=19% Similarity=0.369 Sum_probs=61.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.++++|+|+| +|.+|..+++.|++. +++|++. +|+.++.+.+.... .++..+..|++| .+.+.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~-g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 79 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE-GAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS--EEDVENLVEQIVE 79 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 3568999999 699999999999876 5788888 99988776655443 246778899998 777777665
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 80 ~~~~id~vi~~ag~ 93 (247)
T PRK05565 80 KFGKIDILVNNAGI 93 (247)
T ss_pred HhCCCCEEEECCCc
Confidence 68999999754
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0045 Score=69.62 Aligned_cols=92 Identities=18% Similarity=0.260 Sum_probs=72.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcC-
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLL- 641 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~l- 641 (1201)
|+|+|+| +|. |+.+++.|.+. +++|++..++....+.+.. . +...+..+..| .+.+.+++++ .|+||+++
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~-g~~v~~s~~t~~~~~~~~~-~-g~~~v~~g~l~--~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ-GIEILVTVTTSEGKHLYPI-H-QALTVHTGALD--PQELREFLKRHSIDILVDATH 74 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC-CCeEEEEEccCCccccccc-c-CCceEEECCCC--HHHHHHHHHhcCCCEEEEcCC
Confidence 5899999 498 99999999876 4788887777766555443 2 23456667776 6778888874 89999999
Q ss_pred CCc--ccHHHHHHHHHcCCeEEEc
Q psy12817 642 PYN--LHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 642 P~~--~h~~VakacIeaGkh~VD~ 663 (1201)
|+. .+..++++|-+.|.+|+-.
T Consensus 75 PfA~~is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 75 PFAAQITTNATAVCKELGIPYVRF 98 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEE
Confidence 763 5688999999999999986
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0075 Score=66.31 Aligned_cols=75 Identities=24% Similarity=0.315 Sum_probs=60.5
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.++. +++..+.+|++| .++++++++ ..
T Consensus 1 m~vlItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~~~~~~~~~~~~~g~i 77 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK-GARVVISSRNEENLEKALKELKEYGEVYAVKADLSD--KDDLKNLVKEAWELLGGI 77 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC--HHHHHHHHHHHHHhcCCC
Confidence 5899999 689999999999987 578999999998877665543 356778999998 777776663 57
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 78 d~li~naG~ 86 (259)
T PRK08340 78 DALVWNAGN 86 (259)
T ss_pred CEEEECCCC
Confidence 999999753
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0088 Score=66.02 Aligned_cols=78 Identities=13% Similarity=0.236 Sum_probs=62.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++++|.| +|.+|+.+++.|+++ +++|++++|+.++++++.+.. .++..+.+|++| .+.+.++++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 84 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA-GADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEA 84 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 3468999999 689999999999987 579999999998877766543 246778899998 777766554
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 85 ~~~id~vi~~Ag~ 97 (263)
T PRK07814 85 FGRLDIVVNNVGG 97 (263)
T ss_pred cCCCCEEEECCCC
Confidence 57999999753
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0055 Score=65.95 Aligned_cols=75 Identities=17% Similarity=0.219 Sum_probs=60.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----CCcEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-----SADLVV 638 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-----~~DVVI 638 (1201)
|++|+|.| +|.+|+.+++.|++. +.+|++++|+.++.+.+.. ..++....+|+.| .+.++++++ +.|+||
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTALQA-LPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHHHHh-ccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEE
Confidence 57899999 799999999999987 5799999999887665543 3467778899998 777766655 479999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 77 ~~ag~ 81 (225)
T PRK08177 77 VNAGI 81 (225)
T ss_pred EcCcc
Confidence 98753
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0098 Score=64.52 Aligned_cols=77 Identities=19% Similarity=0.384 Sum_probs=60.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|++|+.+++.|++. +.+|++.+|+.+..+.+.+.. +++..+.+|++| .+++.++++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 457899999 699999999999987 578999999987766655432 245678899998 777766554
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 57999999864
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0062 Score=69.01 Aligned_cols=75 Identities=24% Similarity=0.384 Sum_probs=53.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc--------CCeeE----------EEeecCCCCchH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF--------GRVEA----------TLIDVNNGGSDN 626 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~--------~~v~~----------v~lDV~D~~~e~ 626 (1201)
++||.|||+|.||..++..|++. +++|++.|++.+.+++..+.. ++... -.+.++ .+
T Consensus 3 ~~kIaViGaG~mG~~iA~~la~~-G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~d 77 (287)
T PRK08293 3 IKNVTVAGAGVLGSQIAFQTAFH-GFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLT----TD 77 (287)
T ss_pred ccEEEEECCCHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEe----CC
Confidence 47999999999999999999876 578999999988766554321 00000 001112 24
Q ss_pred HHhhccCCcEEEEcCCCc
Q psy12817 627 LSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 627 L~elI~~~DVVIs~lP~~ 644 (1201)
+++.++++|+||.|+|..
T Consensus 78 ~~~a~~~aDlVieavpe~ 95 (287)
T PRK08293 78 LAEAVKDADLVIEAVPED 95 (287)
T ss_pred HHHHhcCCCEEEEeccCC
Confidence 667788999999999965
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0043 Score=71.05 Aligned_cols=62 Identities=21% Similarity=0.267 Sum_probs=48.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.+||+|||+|.+|++++..|.+. +++|++.+|+.. + .+.++++++|+||.|+|.
T Consensus 3 ~~m~I~iiG~G~~G~~lA~~l~~~-G~~V~~~~r~~~--------------------~----~~~~~~~~advvi~~vp~ 57 (308)
T PRK14619 3 QPKTIAILGAGAWGSTLAGLASAN-GHRVRVWSRRSG--------------------L----SLAAVLADADVIVSAVSM 57 (308)
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-CCEEEEEeCCCC--------------------C----CHHHHHhcCCEEEEECCh
Confidence 457899999999999999999886 478999999742 1 245566789999999997
Q ss_pred cccHHHH
Q psy12817 644 NLHHHVA 650 (1201)
Q Consensus 644 ~~h~~Va 650 (1201)
.....++
T Consensus 58 ~~~~~v~ 64 (308)
T PRK14619 58 KGVRPVA 64 (308)
T ss_pred HHHHHHH
Confidence 5444444
|
|
| >PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0092 Score=71.71 Aligned_cols=116 Identities=16% Similarity=0.212 Sum_probs=71.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe-e--------EEEeecCCCCchHHHhhccCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV-E--------ATLIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v-~--------~v~lDV~D~~~e~L~elI~~~ 634 (1201)
.++||.|||.|+||.+++..|++ + ++|+++|+++++.+.+.+...-+ + ...+-+++ .. +.++++
T Consensus 5 ~~mkI~vIGlGyvGlpmA~~la~-~-~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~----~~-~~~~~a 77 (425)
T PRK15182 5 DEVKIAIIGLGYVGLPLAVEFGK-S-RQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTS----EI-EKIKEC 77 (425)
T ss_pred CCCeEEEECcCcchHHHHHHHhc-C-CEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEe----CH-HHHcCC
Confidence 45899999999999999999877 3 89999999999999988432100 0 00011111 12 246799
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
|+||.|+|...+.. | -.|.+|+-.....+.+.. +.|.+++.+.-+.||.+.-
T Consensus 78 dvvii~Vptp~~~~--------~--~~dl~~v~~a~~~i~~~l-~~g~lVI~~STv~pgtt~~ 129 (425)
T PRK15182 78 NFYIITVPTPINTY--------K--QPDLTPLIKASETVGTVL-NRGDIVVYESTVYPGCTEE 129 (425)
T ss_pred CEEEEEcCCCCCCC--------C--CcchHHHHHHHHHHHHhc-CCCCEEEEecCCCCcchHH
Confidence 99999998764310 0 023333333333332222 3466666677777776553
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0051 Score=62.57 Aligned_cols=76 Identities=18% Similarity=0.325 Sum_probs=61.3
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC--HHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL--KEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~--~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
|.++|+| +|.+|+.+++.|++++...|.+++|+ .+.++++...+ .++.++.+|+++ .++++++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD--PESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS--HHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc--ccccccccccccccc
Confidence 5789999 79999999999999977789999999 66676665443 357889999998 777776653
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~ld~li~~ag~ 90 (167)
T PF00106_consen 79 GPLDILINNAGI 90 (167)
T ss_dssp SSESEEEEECSC
T ss_pred cccccccccccc
Confidence 57999999753
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0077 Score=74.84 Aligned_cols=102 Identities=24% Similarity=0.232 Sum_probs=69.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC--------------H--------HHH----HHHHHHcCCeeE-
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL--------------K--------EDI----DKVTNEFGRVEA- 614 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~--------------~--------ekA----e~La~~~~~v~~- 614 (1201)
..+..||+|+|||..|..++++|++.+--+++++|.+ . .|+ +++.+..|+++.
T Consensus 335 kL~~~kVLIvGaGGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~ 414 (664)
T TIGR01381 335 RYSQLKVLLLGAGTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT 414 (664)
T ss_pred HHhcCeEEEECCcHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence 4567899999999999999999999876678888742 1 122 233333465543
Q ss_pred -EEeec------CCC--------CchHHHhhccCCcEEEEcCCCcc-cHHHHHHHHHcCCeEEEc
Q psy12817 615 -TLIDV------NNG--------GSDNLSGLVRSADLVVSLLPYNL-HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 615 -v~lDV------~D~--------~~e~L~elI~~~DVVIs~lP~~~-h~~VakacIeaGkh~VD~ 663 (1201)
+...+ -+. +.+.+.++++++|+|+.|+-..- ...+..+|.++++.+|..
T Consensus 415 ~~~~~Ipm~Gh~i~~~~~~~~~~d~~~l~~Li~~~DvV~d~tDn~esR~L~n~~c~~~~kplI~a 479 (664)
T TIGR01381 415 GHRLTVPMPGHPIDEKDVPELEKDIARLEQLIKDHDVVFLLLDSREARWLPTVLCSRHKKIAISA 479 (664)
T ss_pred EeeeeeccccccCCchhhhhccccHHHHHHHHhhCCEEEECCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 33332 110 12468889999999999996532 245667888888887764
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0082 Score=65.57 Aligned_cols=76 Identities=20% Similarity=0.286 Sum_probs=60.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+|+++|.| +|.+|+.+++.|++. +.+|.+.+|+.++++++.... .++..+.+|++| ++.+.++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED-GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 47889999 799999999999987 578999999988777666543 245678899998 777766654
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 47999999853
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.011 Score=63.93 Aligned_cols=77 Identities=16% Similarity=0.239 Sum_probs=61.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++|+|.| +|.+|+.+++.|.+. +.+|++.+|+.++++.+.+.. .++..+.+|+.| .+.+.++++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEA-GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL 82 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 458999999 699999999999986 578888899988777665443 347788899998 777776653
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 58999999853
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0094 Score=64.55 Aligned_cols=77 Identities=17% Similarity=0.341 Sum_probs=62.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
++++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++.+++.... .++..+..|+.| .+.++++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEE-GAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD--RDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 468999999 699999999999986 578999999998877665432 357788999998 777777664
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~~d~vi~~ag~ 90 (250)
T TIGR03206 79 GPVDVLVNNAGW 90 (250)
T ss_pred CCCCEEEECCCC
Confidence 57999999854
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0061 Score=71.28 Aligned_cols=94 Identities=20% Similarity=0.272 Sum_probs=67.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH-HcCC---------eeEEEeecCCCCchHHHhhccC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTN-EFGR---------VEATLIDVNNGGSDNLSGLVRS 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~-~~~~---------v~~v~lDV~D~~~e~L~elI~~ 633 (1201)
|+||+|+| +|++|+.+++.|.+++..+++.+.++.+.+.+... .++. .....+...+ .+. +.+
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~----~~~ 76 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTD--PEA----VDD 76 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCC--HHH----hcC
Confidence 58999999 79999999999999988898877666544432211 1111 0111222222 222 358
Q ss_pred CcEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 634 ADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 634 ~DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|+|+.|+|...+.++++.+.++|+.+||.|
T Consensus 77 ~DvVf~a~p~~~s~~~~~~~~~~G~~vIDls 107 (349)
T PRK08664 77 VDIVFSALPSDVAGEVEEEFAKAGKPVFSNA 107 (349)
T ss_pred CCEEEEeCChhHHHHHHHHHHHCCCEEEECC
Confidence 9999999999888888898899999999986
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0078 Score=65.64 Aligned_cols=77 Identities=19% Similarity=0.353 Sum_probs=60.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS----- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~----- 633 (1201)
++++++|.| +|.+|+.+++.|++. +.+|++.+|++++.+++.+.+ .++..++.|++| .+.+.+++++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARA-GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN--EDAVNAGIDKVAERF 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 468999999 699999999999986 568999999997776665543 235668899998 7777766553
Q ss_pred --CcEEEEcCCC
Q psy12817 634 --ADLVVSLLPY 643 (1201)
Q Consensus 634 --~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 83 ~~~d~vi~~ag~ 94 (262)
T PRK13394 83 GSVDILVSNAGI 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 7999999853
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0058 Score=70.40 Aligned_cols=77 Identities=19% Similarity=0.281 Sum_probs=60.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.||.|+| +|++|.-+++.|.+++++++. +.++.. + +..+ ..++++++|+|+.|+|.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~---------~--------~~~~-----~~~~~~~~D~vFlalp~ 59 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR---------K--------DAAE-----RAKLLNAADVAILCLPD 59 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc---------c--------CcCC-----HhHhhcCCCEEEECCCH
Confidence 4899999 799999999999999999855 433321 1 1111 23455689999999998
Q ss_pred cccHHHHHHHHHcCCeEEEcc
Q psy12817 644 NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~S 664 (1201)
....+++..+.++|+.+||.|
T Consensus 60 ~~s~~~~~~~~~~g~~VIDlS 80 (310)
T TIGR01851 60 DAAREAVSLVDNPNTCIIDAS 80 (310)
T ss_pred HHHHHHHHHHHhCCCEEEECC
Confidence 888888888889999999997
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.006 Score=77.35 Aligned_cols=101 Identities=11% Similarity=0.057 Sum_probs=72.4
Q ss_pred ccccCCCeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCH------------------HHHHHHHHH----cCCee--E
Q psy12817 560 IQTEESRNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLK------------------EDIDKVTNE----FGRVE--A 614 (1201)
Q Consensus 560 ~~~~~mkKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~------------------ekAe~La~~----~~~v~--~ 614 (1201)
++..+..+|+|+|+| +|..++.+|++.+. -+++++|.+. .|++.+++. .|.++ +
T Consensus 102 Q~~L~~~~V~IvG~G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~ 180 (722)
T PRK07877 102 QERLGRLRIGVVGLS-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV 180 (722)
T ss_pred HHHHhcCCEEEEEec-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence 334667899999999 99999999999864 4788887531 133333332 24444 3
Q ss_pred EEeecCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 615 TLIDVNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 615 v~lDV~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~S 664 (1201)
+...++ .+.+.++++++|+||+|+-.. ....+.++|.+.|+.+|..+
T Consensus 181 ~~~~i~---~~n~~~~l~~~DlVvD~~D~~~~R~~ln~~a~~~~iP~i~~~ 228 (722)
T PRK07877 181 FTDGLT---EDNVDAFLDGLDVVVEECDSLDVKVLLREAARARRIPVLMAT 228 (722)
T ss_pred EeccCC---HHHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 333343 578999999999999999643 34567789999999988764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0086 Score=64.73 Aligned_cols=77 Identities=18% Similarity=0.338 Sum_probs=61.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.... .++..+.+|+++ .+.+.++++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKE-GVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD--YEEVTAAIEQLKNEL 82 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 357899999 799999999999986 468999999988776654432 246778899998 778877765
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++.+.
T Consensus 83 ~~id~vi~~ag~ 94 (239)
T PRK07666 83 GSIDILINNAGI 94 (239)
T ss_pred CCccEEEEcCcc
Confidence 68999999853
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0092 Score=65.44 Aligned_cols=78 Identities=18% Similarity=0.240 Sum_probs=62.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++++.+ .++..+.+|++| .+.+.++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~ 81 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFARE-GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAE 81 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHH
Confidence 3468899999 699999999999987 578999999998887776543 136678899998 777777665
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 82 ~~~g~id~li~~ag~ 96 (260)
T PRK07063 82 EAFGPLDVLVNNAGI 96 (260)
T ss_pred HHhCCCcEEEECCCc
Confidence 58999999753
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0054 Score=64.94 Aligned_cols=70 Identities=21% Similarity=0.262 Sum_probs=52.0
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+...++|+|+|+|.||+.+++.|... +.+|.++||+......... . ++. ...++++++++|+|++++
T Consensus 33 ~l~g~tvgIiG~G~IG~~vA~~l~~f-G~~V~~~d~~~~~~~~~~~-~-~~~----------~~~l~ell~~aDiv~~~~ 99 (178)
T PF02826_consen 33 ELRGKTVGIIGYGRIGRAVARRLKAF-GMRVIGYDRSPKPEEGADE-F-GVE----------YVSLDELLAQADIVSLHL 99 (178)
T ss_dssp -STTSEEEEESTSHHHHHHHHHHHHT-T-EEEEEESSCHHHHHHHH-T-TEE----------ESSHHHHHHH-SEEEE-S
T ss_pred ccCCCEEEEEEEcCCcCeEeeeeecC-CceeEEecccCChhhhccc-c-cce----------eeehhhhcchhhhhhhhh
Confidence 45679999999999999999999976 5799999999886552222 1 222 236888899999999999
Q ss_pred CCc
Q psy12817 642 PYN 644 (1201)
Q Consensus 642 P~~ 644 (1201)
|..
T Consensus 100 plt 102 (178)
T PF02826_consen 100 PLT 102 (178)
T ss_dssp SSS
T ss_pred ccc
Confidence 953
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.018 Score=72.92 Aligned_cols=95 Identities=12% Similarity=0.089 Sum_probs=63.9
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-cCCcEEEEc
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-RSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-~~~DVVIs~ 640 (1201)
+.++++|+|||+|.||+.++..|.+. +++|++++|+... ..+..+ ++.. ..+ ..+++ +++|+||.|
T Consensus 49 ~~~~~kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~~~--~~A~~~-Gv~~----~~d-----~~e~~~~~aDvViLa 115 (667)
T PLN02712 49 NTTQLKIAIIGFGNYGQFLAKTLISQ-GHTVLAHSRSDHS--LAARSL-GVSF----FLD-----PHDLCERHPDVILLC 115 (667)
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHH--HHHHHc-CCEE----eCC-----HHHHhhcCCCEEEEc
Confidence 45578999999999999999999876 4789999998543 234444 3332 222 33433 469999999
Q ss_pred CCCcccHHHHHHH----HHcCCeEEEccCChHH
Q psy12817 641 LPYNLHHHVAEFC----IQHGKNLVTASYLSPE 669 (1201)
Q Consensus 641 lP~~~h~~Vakac----IeaGkh~VD~Syvs~e 669 (1201)
+|...-..+++.. ++.++-++|.+-+...
T Consensus 116 vP~~~~~~vl~~l~~~~l~~g~iVvDv~SvK~~ 148 (667)
T PLN02712 116 TSIISTENVLKSLPLQRLKRNTLFVDVLSVKEF 148 (667)
T ss_pred CCHHHHHHHHHhhhhhcCCCCeEEEECCCCcHH
Confidence 9976545554432 2345667777654443
|
|
| >PRK06199 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0047 Score=73.13 Aligned_cols=93 Identities=19% Similarity=0.269 Sum_probs=68.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCC-eEEEEeCCHHHHHHHHHHcC----CeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENI-HITLGSLLKEDIDKVTNEFG----RVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~-~VtVadR~~ekAe~La~~~~----~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.++++|||+|..++..++.+.. ++++ +|.|.+|++++++++++++. ++.. +.+. ++.+++++++|+|+
T Consensus 155 a~~l~iiG~G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~--v~~~----~s~~eav~~ADIVv 228 (379)
T PRK06199 155 SKVVGLLGPGVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITN--VEVV----DSIEEVVRGSDIVT 228 (379)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCce--EEEe----CCHHHHHcCCCEEE
Confidence 5799999999999999999876 4434 69999999999999887653 2211 1122 25788889999999
Q ss_pred EcCCCcc-----cHHHHHHHHHcCCeEEEc
Q psy12817 639 SLLPYNL-----HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 639 s~lP~~~-----h~~VakacIeaGkh~VD~ 663 (1201)
.|++..- .+-+-...++.|.|+...
T Consensus 229 taT~s~~~~~s~~Pv~~~~~lkpG~hv~~i 258 (379)
T PRK06199 229 YCNSGETGDPSTYPYVKREWVKPGAFLLMP 258 (379)
T ss_pred EccCCCCCCCCcCcEecHHHcCCCcEEecC
Confidence 9996422 133334567899998765
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.019 Score=74.29 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=77.3
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||+|.| +|++|+.+++.|.+. +++|++.+|+.... +. .++..+..|+.| .+.+.++++++|+||+|....
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~-G~~Vv~l~R~~~~~--~~---~~v~~v~gDL~D--~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ-GHEVVGIARHRPDS--WP---SSADFIAADIRD--ATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCchhh--cc---cCceEEEeeCCC--HHHHHHHHhCCCEEEECCCcc
Confidence 5899999 699999999999886 57899999875321 11 257788999998 888999999999999998532
Q ss_pred c---------cHHHHHHHHHcCC-eEEEccCChHHHHHHHHHHHHcCC
Q psy12817 645 L---------HHHVAEFCIQHGK-NLVTASYLSPEMMALHERAASAGI 682 (1201)
Q Consensus 645 ~---------h~~VakacIeaGk-h~VD~Syvs~e~~eLde~AkeAGV 682 (1201)
. ...++++|.++|+ ++|-+|-... .+.++.+++.|+
T Consensus 73 ~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~K--~aaE~ll~~~gl 118 (854)
T PRK05865 73 GRNDHINIDGTANVLKAMAETGTGRIVFTSSGHQ--PRVEQMLADCGL 118 (854)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCeEEEECCcHH--HHHHHHHHHcCC
Confidence 1 2346788888875 6666654431 122334455665
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.01 Score=64.95 Aligned_cols=76 Identities=17% Similarity=0.278 Sum_probs=62.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.++|+|.| +|.+|+.+++.|+++ +++|++++|+.++.+++.+... ++..+.+|++| .+.+.++++ ..
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 357899999 699999999999987 5789999999998887776542 46778899998 777776665 47
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|+||++..
T Consensus 82 d~li~~ag 89 (257)
T PRK07067 82 DILFNNAA 89 (257)
T ss_pred CEEEECCC
Confidence 99999875
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0096 Score=65.91 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=60.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
+.++|+|.| +|.+|+.+++.|++. +++|++.+|+.++++.+.+.. .++..+..|+.| .+.+.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAA-GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD--EDQVARAVDAATA 82 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 358999999 699999999999986 578999999988776655442 245677889998 777777665
Q ss_pred ---CCcEEEEcCC
Q psy12817 633 ---SADLVVSLLP 642 (1201)
Q Consensus 633 ---~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 83 ~~~~~d~li~~ag 95 (276)
T PRK05875 83 WHGRLHGVVHCAG 95 (276)
T ss_pred HcCCCCEEEECCC
Confidence 5799999985
|
|
| >PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.016 Score=74.74 Aligned_cols=161 Identities=14% Similarity=0.192 Sum_probs=96.6
Q ss_pred cccccccccccCCCeEEEEcCchhHHHHHHHHHhC-------CC--Ce-EEEEeCCHH-------HHHHHHHHcCCeeEE
Q psy12817 553 KSRHKADIQTEESRNVLLLGAGYVSRPLIEYLHRD-------EN--IH-ITLGSLLKE-------DIDKVTNEFGRVEAT 615 (1201)
Q Consensus 553 ~~~s~~~~~~~~mkKVLILGAG~VG~~va~~La~~-------~~--~~-VtVadR~~e-------kAe~La~~~~~v~~v 615 (1201)
++.|..=....+..+|+|+|+|.||+.+++.|.++ .+ ++ +.|++++.. ....+...+...
T Consensus 446 ~~LH~~f~~~~~~i~i~l~G~G~VG~~l~~~l~~~~~~l~~~~g~~~~v~~I~~s~~~~~~~~gi~~~~~~~~~~~~--- 522 (810)
T PRK09466 446 QGLHQSLFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLVGVVDSRRSLLNYDGLDASRALAFFDDE--- 522 (810)
T ss_pred HHHHHHHhCcCceEEEEEEecCCChHHHHHHHHHHHHHHHHhcCCCEEEEEEEeCCccccCccCCCHHHHHhhHHhh---
Confidence 33343334455678999999999999999998653 13 33 345665532 112222222110
Q ss_pred EeecCCCCchHHHhhccC----CcEEEEcCCCcccHHHHHHHHHcCCeEEEccC-----ChHHHHHHHHHHHHcCCEEEe
Q psy12817 616 LIDVNNGGSDNLSGLVRS----ADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY-----LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 616 ~lDV~D~~~e~L~elI~~----~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy-----vs~e~~eLde~AkeAGVtil~ 686 (1201)
..+ .+ .+.+.+.+.+ .++||+|+|..-.......|+++|+|+|++.= ......+|.+.|+++|+.+.-
T Consensus 523 ~~~-~~--~~~~~e~i~~~~~~~~vvVd~t~~~~~~~~~~~aL~~G~~VVtaNK~~~a~~~~~~~~l~~~a~~~~~~~~y 599 (810)
T PRK09466 523 AVE-WD--EESLFLWLRAHPYDELVVLDVTASEQLALQYPDFASHGFHVISANKLAGSSPSNFYRQIKDAFAKTGRHWLY 599 (810)
T ss_pred cCC-cc--HHHHHHHHhhcCCCCcEEEECCCChHHHHHHHHHHHcCCEEEcCCcccccccHHHHHHHHHHHHHcCCeEEE
Confidence 011 11 3344455542 35999999865334455699999999999852 235677898999999999987
Q ss_pred ccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCC
Q psy12817 687 EVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGG 722 (1201)
Q Consensus 687 e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGG 722 (1201)
|.-+.-|+==+ ..++.+.+.|.+|.++.....|
T Consensus 600 EasV~~giPii---~~l~~l~~~gd~i~~i~GIlnG 632 (810)
T PRK09466 600 NATVGAGLPIN---HTVRDLRNSGDSILAISGIFSG 632 (810)
T ss_pred eceeeeccChH---HHHHHHHhccCcEEEEEEEEcc
Confidence 75433332111 2233444456788777654433
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.018 Score=71.99 Aligned_cols=112 Identities=17% Similarity=0.211 Sum_probs=81.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~ 643 (1201)
..+|+|+|+|++|+.+++.|.+. +.++++.|.|+++++++.+ . +...+..|.+| ++.++++ ++++|+||.+++.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~-~-g~~v~~GDat~--~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMAN-KMRITVLERDISAVNLMRK-Y-GYKVYYGDATQ--LELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHh-C-CCeEEEeeCCC--HHHHHhcCCccCCEEEEEeCC
Confidence 47899999999999999999875 5789999999999998754 3 67889999998 7778765 7789999999986
Q ss_pred cc-cHHHHHHHHHcCC--eEEEccCChHHHHHHHHHHHHcCCEEE
Q psy12817 644 NL-HHHVAEFCIQHGK--NLVTASYLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 644 ~~-h~~VakacIeaGk--h~VD~Syvs~e~~eLde~AkeAGVtil 685 (1201)
.. +..++..+-+... +++.-.......+.| +++|+..+
T Consensus 475 ~~~n~~i~~~~r~~~p~~~IiaRa~~~~~~~~L----~~~Ga~~v 515 (601)
T PRK03659 475 PEDTMKIVELCQQHFPHLHILARARGRVEAHEL----LQAGVTQF 515 (601)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH----HhCCCCEE
Confidence 53 3345555544433 344434444444443 55676544
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0097 Score=65.05 Aligned_cols=75 Identities=16% Similarity=0.261 Sum_probs=61.4
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++.+..... ++..+.+|+.| .+.+.+++. ..
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA-GDRVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 46899999 599999999999986 5789999999998887776542 46778999998 777776665 37
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|+||++..
T Consensus 79 d~vi~~ag 86 (257)
T PRK07074 79 DVLVANAG 86 (257)
T ss_pred CEEEECCC
Confidence 99999975
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0061 Score=64.52 Aligned_cols=75 Identities=17% Similarity=0.261 Sum_probs=53.1
Q ss_pred ccCCCeEEEEcCchh-HHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 562 TEESRNVLLLGAGYV-SRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILGAG~V-G~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
+...++|+|+|+|.+ |..++++|.+++ .+|++++|+. +++.+.++++|+||++
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g-~~V~v~~r~~-------------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRN-ATVTVCHSKT-------------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCC-CEEEEEECCc-------------------------hhHHHHHhhCCEEEEc
Confidence 466799999999985 899999999864 5799999863 1355677899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
++... -+-+.-++.+.-++|++
T Consensus 95 t~~~~--ii~~~~~~~~~viIDla 116 (168)
T cd01080 95 VGKPG--LVKGDMVKPGAVVIDVG 116 (168)
T ss_pred CCCCc--eecHHHccCCeEEEEcc
Confidence 97531 12222334445555554
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.01 Score=67.18 Aligned_cols=79 Identities=11% Similarity=0.123 Sum_probs=61.1
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
+.+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.+++++..+.. .++..+.+|+.| .+.++++++
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~ 89 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS--LASVRAAADAL 89 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHH
Confidence 44568999999 699999999999987 578999999988765543322 246778899998 777766654
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 90 ~~~~~~iD~li~nAg~ 105 (306)
T PRK06197 90 RAAYPRIDLLINNAGV 105 (306)
T ss_pred HhhCCCCCEEEECCcc
Confidence 47999999753
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.012 Score=65.46 Aligned_cols=76 Identities=14% Similarity=0.167 Sum_probs=61.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.+ .++.++.+|++| .++++++++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARA-GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 457899999 689999999999987 578999999998887766543 247788999998 777777765
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 84 g~iD~lv~nag 94 (263)
T PRK08339 84 GEPDIFFFSTG 94 (263)
T ss_pred CCCcEEEECCC
Confidence 4799999874
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0061 Score=70.34 Aligned_cols=76 Identities=17% Similarity=0.236 Sum_probs=59.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhccC--CcEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVRS--ADLV 637 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~~--~DVV 637 (1201)
++|+|+|.| +|++|+.+++.|++. +.+|++.+|+........... .++..+..|+.| .+.+.+++++ .|+|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~d~v 79 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLEL-GAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD--AAKLRKAIAEFKPEIV 79 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHC-CCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC--HHHHHHHHhhcCCCEE
Confidence 458999999 699999999999986 578988898776543322111 246678899998 8889888885 5999
Q ss_pred EEcCC
Q psy12817 638 VSLLP 642 (1201)
Q Consensus 638 Is~lP 642 (1201)
|++..
T Consensus 80 ih~A~ 84 (349)
T TIGR02622 80 FHLAA 84 (349)
T ss_pred EECCc
Confidence 99985
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.015 Score=63.21 Aligned_cols=89 Identities=18% Similarity=0.154 Sum_probs=61.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.++|+|+|+|.+|...++.|.+.+ .+|+|++++.. .+++++.. ..+....-.. ..+.+.++|+||.|+
T Consensus 8 l~~k~vLVIGgG~va~~ka~~Ll~~g-a~V~VIs~~~~~~l~~l~~~-~~i~~~~~~~-------~~~~l~~adlViaaT 78 (202)
T PRK06718 8 LSNKRVVIVGGGKVAGRRAITLLKYG-AHIVVISPELTENLVKLVEE-GKIRWKQKEF-------EPSDIVDAFLVIAAT 78 (202)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEcCCCCHHHHHHHhC-CCEEEEecCC-------ChhhcCCceEEEEcC
Confidence 45789999999999999999999864 78999988753 34555443 2344322111 123467899999999
Q ss_pred CCc-ccHHHHHHHHHcCCeEE
Q psy12817 642 PYN-LHHHVAEFCIQHGKNLV 661 (1201)
Q Consensus 642 P~~-~h~~VakacIeaGkh~V 661 (1201)
... .+..+.+.| +.++.+-
T Consensus 79 ~d~elN~~i~~~a-~~~~lvn 98 (202)
T PRK06718 79 NDPRVNEQVKEDL-PENALFN 98 (202)
T ss_pred CCHHHHHHHHHHH-HhCCcEE
Confidence 653 567777777 5565443
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.012 Score=64.24 Aligned_cols=77 Identities=17% Similarity=0.306 Sum_probs=61.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|.+.+|+.++++++.+.+ .++..+.+|+.| .++++++++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFARE-GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 357899999 699999999999986 578999999998887776543 246678899998 777776665
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 57999999853
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.011 Score=67.63 Aligned_cols=74 Identities=20% Similarity=0.302 Sum_probs=55.3
Q ss_pred EEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeE----EEeecCCCCchHHHhhcc--CC
Q psy12817 568 VLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEA----TLIDVNNGGSDNLSGLVR--SA 634 (1201)
Q Consensus 568 VLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~----v~lDV~D~~~e~L~elI~--~~ 634 (1201)
|+|-| +|.+|+.++++|++.+..+|.+.|+++.+.-.+..++ + ++.. +..|+.| .+.+..+++ +.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd--~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRD--KERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCH--HHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccC--HHHHHHHHhhcCC
Confidence 78999 7999999999999986678999999999887777665 2 3432 3568887 888999999 89
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+|+++.-+
T Consensus 79 diVfHaAA~ 87 (293)
T PF02719_consen 79 DIVFHAAAL 87 (293)
T ss_dssp SEEEE----
T ss_pred CEEEEChhc
Confidence 999999854
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.028 Score=65.26 Aligned_cols=151 Identities=15% Similarity=0.100 Sum_probs=83.0
Q ss_pred cCCCeEEEEcC-chhHHHHHHHHHhCCC-CeEEEEeCCHHHHH--HHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 563 EESRNVLLLGA-GYVSRPLIEYLHRDEN-IHITLGSLLKEDID--KVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILGA-G~VG~~va~~La~~~~-~~VtVadR~~ekAe--~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.+|+||+|+|+ |.||+.++..|+..+. .++.+.|++..+++ .+....+ .....+.+| ..+..+.++++|+||
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~--~~~v~~~td--~~~~~~~l~gaDvVV 81 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDT--PAKVTGYAD--GELWEKALRGADLVL 81 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCc--CceEEEecC--CCchHHHhCCCCEEE
Confidence 57899999997 9999999999885533 46999999433332 2221111 223344544 344567889999999
Q ss_pred EcCCCcc------------c----HHHHHHHHHcCCe--EEEccCChHHHHHHHH--HHHHcCCEE--EeccccCchhHH
Q psy12817 639 SLLPYNL------------H----HHVAEFCIQHGKN--LVTASYLSPEMMALHE--RAASAGITV--LNEVGLDPGIDH 696 (1201)
Q Consensus 639 s~lP~~~------------h----~~VakacIeaGkh--~VD~Syvs~e~~eLde--~AkeAGVti--l~e~GlDPGIdh 696 (1201)
+++.... + ..++++..+++.+ ++-.|--.+-+..+.+ ..+..|..= +.++| .+|+
T Consensus 82 itaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g---~LDs 158 (321)
T PTZ00325 82 ICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVT---TLDV 158 (321)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeech---hHHH
Confidence 9984311 1 1244555567765 2223332223333321 123334321 22333 4888
Q ss_pred HHHHHHHHHhhhcCCcEEEEEeecCC
Q psy12817 697 LLAMECIDAAHLNGGKVESFVSYCGG 722 (1201)
Q Consensus 697 mlA~~~idei~~~ggkV~sf~s~cGG 722 (1201)
.-.+..+.+- .+-...++..|+-|
T Consensus 159 ~R~r~~la~~--l~v~~~~V~~~VlG 182 (321)
T PTZ00325 159 VRARKFVAEA--LGMNPYDVNVPVVG 182 (321)
T ss_pred HHHHHHHHHH--hCcChhheEEEEEe
Confidence 7777655443 12234455556544
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.013 Score=63.37 Aligned_cols=77 Identities=10% Similarity=0.128 Sum_probs=60.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhc-------cCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLV-------RSA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI-------~~~ 634 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.++++ ++..+++|+.| .+++.+++ ...
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAE-GARVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 357999999 699999999999987 4789999999888777766553 46678899987 66555443 357
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 82 d~vi~~ag~ 90 (249)
T PRK06500 82 DAVFINAGV 90 (249)
T ss_pred CEEEECCCC
Confidence 999999864
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.013 Score=62.60 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=59.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc--CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF--GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~--~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++..+..... .++..+..|+.| .+++.++++ +
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAAR-GARVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHC-CCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 457999999 699999999999887 678999999887655443322 246777899988 777776665 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++.+.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 7999998753
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.013 Score=67.91 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=62.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhc------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLV------ 631 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI------ 631 (1201)
...+.|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.++. ..+..+.+|++| .+++++++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~-G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 81 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARR-GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASF 81 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHh
Confidence 3457999999 599999999999987 578999999999888776543 245677899998 77777765
Q ss_pred -cCCcEEEEcCCC
Q psy12817 632 -RSADLVVSLLPY 643 (1201)
Q Consensus 632 -~~~DVVIs~lP~ 643 (1201)
...|++|++...
T Consensus 82 ~g~iD~lVnnAG~ 94 (330)
T PRK06139 82 GGRIDVWVNNVGV 94 (330)
T ss_pred cCCCCEEEECCCc
Confidence 357999999853
|
|
| >PRK08605 D-lactate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0099 Score=69.16 Aligned_cols=88 Identities=15% Similarity=0.210 Sum_probs=58.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||+|.+|+.+++.|++.-+.+|...|++..+.. .. .+. . ...++++++++|+|+.++|
T Consensus 144 l~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~~--~~---~~~-----~----~~~l~ell~~aDvIvl~lP 209 (332)
T PRK08605 144 IKDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAKA--AT---YVD-----Y----KDTIEEAVEGADIVTLHMP 209 (332)
T ss_pred eCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccHhH--Hh---hcc-----c----cCCHHHHHHhCCEEEEeCC
Confidence 44679999999999999999995444678988998765431 11 111 1 2257888899999999999
Q ss_pred CcccHHHH-----HHHHHcCCeEEEcc
Q psy12817 643 YNLHHHVA-----EFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~Va-----kacIeaGkh~VD~S 664 (1201)
.......+ ...++.|.-+|+++
T Consensus 210 ~t~~t~~li~~~~l~~mk~gailIN~s 236 (332)
T PRK08605 210 ATKYNHYLFNADLFKHFKKGAVFVNCA 236 (332)
T ss_pred CCcchhhhcCHHHHhcCCCCcEEEECC
Confidence 65322111 12234555566654
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0093 Score=66.04 Aligned_cols=77 Identities=16% Similarity=0.223 Sum_probs=60.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.. .++.++.+|++| .+.+.+++++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARA-GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADE 83 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence 3468999999 699999999999976 578999999988776654332 245678899998 7777766543
Q ss_pred ---CcEEEEcCC
Q psy12817 634 ---ADLVVSLLP 642 (1201)
Q Consensus 634 ---~DVVIs~lP 642 (1201)
.|+||++..
T Consensus 84 ~~~iD~vi~~ag 95 (264)
T PRK07576 84 FGPIDVLVSGAA 95 (264)
T ss_pred cCCCCEEEECCC
Confidence 699999874
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.011 Score=64.50 Aligned_cols=77 Identities=14% Similarity=0.159 Sum_probs=60.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS----- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~----- 633 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++..+.+|++| .+.+.+++++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFARE-GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTR--DAEVKALVEQTIAAY 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 458999999 699999999999986 478999999988776555432 247788899998 7777776654
Q ss_pred --CcEEEEcCCC
Q psy12817 634 --ADLVVSLLPY 643 (1201)
Q Consensus 634 --~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 83 g~id~li~~ag~ 94 (253)
T PRK06172 83 GRLDYAFNNAGI 94 (253)
T ss_pred CCCCEEEECCCC
Confidence 4999999753
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0078 Score=69.21 Aligned_cols=74 Identities=18% Similarity=0.239 Sum_probs=57.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-----HHHHHHHHc-----CCeeEEEeecCCCCchHHHhhccC-
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-----DIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVRS- 633 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-----kAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~~- 633 (1201)
|+|+|.| +|++|+.+++.|++. +++|++.+|+.+ +.+.+.... ++++.+..|+.| .+.+.+++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~l~~~~~~~ 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK-GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTD--SSNLRRIIDEI 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC-CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCC--HHHHHHHHHhC
Confidence 5899999 799999999999987 578998888753 233332111 247888999998 8889998885
Q ss_pred -CcEEEEcCC
Q psy12817 634 -ADLVVSLLP 642 (1201)
Q Consensus 634 -~DVVIs~lP 642 (1201)
+|+||++..
T Consensus 78 ~~d~ViH~Aa 87 (343)
T TIGR01472 78 KPTEIYNLAA 87 (343)
T ss_pred CCCEEEECCc
Confidence 599999984
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.014 Score=66.48 Aligned_cols=94 Identities=16% Similarity=0.152 Sum_probs=63.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI~~~DVVIs~lP 642 (1201)
.+++|+|+|.|.||+.+++.|.+. ++.+.+.+++.+.+....+.. +++.|.- .+...+.++++|+||-|+|
T Consensus 2 ~~~~v~IvG~GliG~s~a~~l~~~-g~~v~i~g~d~~~~~~~~a~~-------lgv~d~~~~~~~~~~~~~aD~VivavP 73 (279)
T COG0287 2 ASMKVGIVGLGLMGGSLARALKEA-GLVVRIIGRDRSAATLKAALE-------LGVIDELTVAGLAEAAAEADLVIVAVP 73 (279)
T ss_pred CCcEEEEECCchHHHHHHHHHHHc-CCeEEEEeecCcHHHHHHHhh-------cCcccccccchhhhhcccCCEEEEecc
Confidence 468999999999999999999886 466666776666554433321 2232200 1123566678999999999
Q ss_pred CcccHHHHHHHH---HcCCeEEEccC
Q psy12817 643 YNLHHHVAEFCI---QHGKNLVTASY 665 (1201)
Q Consensus 643 ~~~h~~VakacI---eaGkh~VD~Sy 665 (1201)
.....++++.-. +.|+-+.|..-
T Consensus 74 i~~~~~~l~~l~~~l~~g~iv~Dv~S 99 (279)
T COG0287 74 IEATEEVLKELAPHLKKGAIVTDVGS 99 (279)
T ss_pred HHHHHHHHHHhcccCCCCCEEEeccc
Confidence 776666665443 56777778743
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.023 Score=71.37 Aligned_cols=87 Identities=15% Similarity=0.222 Sum_probs=69.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHh-hccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSG-LVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~e-lI~~~DVVIs~lP~ 643 (1201)
..+|+|+|+|++|+.+++.|.++ +.++++.|.|+++++++.+ . +...+..|.+| ++.+++ -++++|+||.+++.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~-~-g~~v~~GDat~--~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSS-GVKMTVLDHDPDHIETLRK-F-GMKVFYGDATR--MDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHh-c-CCeEEEEeCCC--HHHHHhcCCCcCCEEEEEeCC
Confidence 47999999999999999999876 5789999999999998865 3 67889999998 777764 46789999999975
Q ss_pred c-ccHHHHHHHHHc
Q psy12817 644 N-LHHHVAEFCIQH 656 (1201)
Q Consensus 644 ~-~h~~VakacIea 656 (1201)
. .+..++..+-+.
T Consensus 475 ~~~n~~i~~~ar~~ 488 (621)
T PRK03562 475 PQTSLQLVELVKEH 488 (621)
T ss_pred HHHHHHHHHHHHHh
Confidence 3 334444444443
|
|
| >PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.029 Score=72.61 Aligned_cols=147 Identities=20% Similarity=0.250 Sum_probs=90.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCC------CCeEE---EEeCCHHH-------HHHHHHHcCCeeEEEeecCCCCch
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDE------NIHIT---LGSLLKED-------IDKVTNEFGRVEATLIDVNNGGSD 625 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~------~~~Vt---VadR~~ek-------Ae~La~~~~~v~~v~lDV~D~~~e 625 (1201)
..+..+|+|+|+|.||+.+++.|.++. ++++. +++++... ...+....... ....+ .+
T Consensus 462 ~~~~~~i~l~G~G~VG~~~~~~l~~~~~~l~~~~~~l~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~----~~~~~--~~ 535 (819)
T PRK09436 462 SDQVLDVFVIGVGGVGGALLEQIKRQQPWLKKKNIDLRVCGIANSRKMLLDEHGIDLDNWREELAEA----GEPFD--LD 535 (819)
T ss_pred ccccccEEEEecCHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEcCCccccCCCCCCHHHHHHHHhhc----cCCCC--HH
Confidence 346799999999999999999986532 33433 34432220 11222111110 00112 34
Q ss_pred HHHhhcc----CCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc--CCh---HHHHHHHHHHHHcCCEEEeccccC---ch
Q psy12817 626 NLSGLVR----SADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLS---PEMMALHERAASAGITVLNEVGLD---PG 693 (1201)
Q Consensus 626 ~L~elI~----~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs---~e~~eLde~AkeAGVtil~e~GlD---PG 693 (1201)
.+.+.+. ..|+||.|+|...-......|+++|+|+|++. ..+ ....+|.+.|+++|+.+.-|.-+. |=
T Consensus 536 ~~~~~~~~~~~~~~vvvd~t~~~~~~~~~~~al~~g~~VVtaNK~~~a~~~~~~~el~~~a~~~~~~~~yeatV~~giPi 615 (819)
T PRK09436 536 RLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLAAGFHVVTPNKKANTSSYAYYHQLREAARKSRRKFLYETNVGAGLPV 615 (819)
T ss_pred HHHHHHhhcCCCCCEEEECCCChHHHHHHHHHHHcCCEEEcCCchhccCCHHHHHHHHHHHHHcCCeEEEeeeeccccch
Confidence 4555555 36999999986433445579999999999995 233 467889899999999998775332 54
Q ss_pred hHHHHHHHHHHHhhhcCCcEEEEEeec
Q psy12817 694 IDHLLAMECIDAAHLNGGKVESFVSYC 720 (1201)
Q Consensus 694 IdhmlA~~~idei~~~ggkV~sf~s~c 720 (1201)
|+.+ .+....|.+|.++....
T Consensus 616 i~~l------~~~~~~g~~i~~i~Gil 636 (819)
T PRK09436 616 IETL------QNLLNAGDELLKFEGIL 636 (819)
T ss_pred HHHH------HHHHhccCcEEEEEEEE
Confidence 4433 23333456777766433
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.013 Score=64.95 Aligned_cols=77 Identities=17% Similarity=0.259 Sum_probs=61.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.+.++|.| +|.+|+.+++.|++. +.+|++.+|+.++++.+.+.+ .++..+.+|+.| .+.+.++++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARA-GAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 458899999 699999999999986 578999999988877766543 246778899998 666766554
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 86 g~id~li~~ag~ 97 (278)
T PRK08277 86 GPCDILINGAGG 97 (278)
T ss_pred CCCCEEEECCCC
Confidence 57999999753
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.016 Score=73.00 Aligned_cols=79 Identities=18% Similarity=0.314 Sum_probs=58.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhC-CCCeEEEEeCCH--HHHHHHHH--HcCCeeEEEeecCCCCchHHHhhc--cCC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRD-ENIHITLGSLLK--EDIDKVTN--EFGRVEATLIDVNNGGSDNLSGLV--RSA 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~-~~~~VtVadR~~--ekAe~La~--~~~~v~~v~lDV~D~~~e~L~elI--~~~ 634 (1201)
.++|||+|.| +|++|+.+++.|.++ .+++|++.+|.. ++.+.+.. ..++++.+..|+.| .+.+..++ .++
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~~~~~~~~~~~~ 81 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS--ADLVNYLLITEGI 81 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCC--hHHHHHHHhhcCC
Confidence 3568999999 799999999999976 367888888742 23333322 12468888999998 66776655 579
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||+|...
T Consensus 82 D~ViHlAa~ 90 (668)
T PLN02260 82 DTIMHFAAQ 90 (668)
T ss_pred CEEEECCCc
Confidence 999999853
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0092 Score=66.81 Aligned_cols=78 Identities=19% Similarity=0.254 Sum_probs=62.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
.+++.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++..+.+|++| .+++.+++++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~-G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 80 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARR-GARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRL 80 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHH
Confidence 3467899999 799999999999987 578999999988877765543 136678899998 7788776653
Q ss_pred ---CcEEEEcCCC
Q psy12817 634 ---ADLVVSLLPY 643 (1201)
Q Consensus 634 ---~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 81 ~g~id~li~nAg~ 93 (275)
T PRK05876 81 LGHVDVVFSNAGI 93 (275)
T ss_pred cCCCCEEEECCCc
Confidence 6999999753
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.012 Score=68.09 Aligned_cols=95 Identities=21% Similarity=0.254 Sum_probs=61.9
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCee--EEEeecCC
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRVE--ATLIDVNN 621 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v~--~v~lDV~D 621 (1201)
||+|+|+|.+|..+++.|+..+--+++++|.+. .|++.+++ ..|.++ +...++.+
T Consensus 1 kVlIVGaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~ 80 (312)
T cd01489 1 KVLVVGAGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD 80 (312)
T ss_pred CEEEECCCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence 699999999999999999987766788887432 23333332 224433 33344443
Q ss_pred CCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEc
Q psy12817 622 GGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 622 ~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~ 663 (1201)
.....+++++.|+||+|+-. .....+-+.|.+.++.+++.
T Consensus 81 --~~~~~~f~~~~DvVv~a~Dn~~ar~~in~~c~~~~ip~I~~ 121 (312)
T cd01489 81 --PDFNVEFFKQFDLVFNALDNLAARRHVNKMCLAADVPLIES 121 (312)
T ss_pred --ccchHHHHhcCCEEEECCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 22334778899999999842 22344566777777776664
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0062 Score=67.19 Aligned_cols=72 Identities=21% Similarity=0.203 Sum_probs=59.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC-------CcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS-------ADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~-------~DV 636 (1201)
+++|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++.+.. .++..+.+|++| .+++++++++ .|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~----~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARA-GYRVFGTSRNPARAAPI----PGVELLELDVTD--DASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCChhhcccc----CCCeeEEeecCC--HHHHHHHHHHHHHhCCCCCE
Confidence 46899999 799999999999987 57899999998765432 367889999998 8888887764 699
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 77 li~~ag~ 83 (270)
T PRK06179 77 LVNNAGV 83 (270)
T ss_pred EEECCCC
Confidence 9999854
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.015 Score=67.31 Aligned_cols=78 Identities=18% Similarity=0.217 Sum_probs=62.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
..+++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.++. .++..+.+|++| .++++++++
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~-G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~ 82 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARR-GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEE 82 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence 3467899999 699999999999987 578999999998887766543 246778899998 777776654
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 83 ~g~iD~lInnAg~ 95 (334)
T PRK07109 83 LGPIDTWVNNAMV 95 (334)
T ss_pred CCCCCEEEECCCc
Confidence 57999999754
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.012 Score=64.49 Aligned_cols=76 Identities=18% Similarity=0.314 Sum_probs=60.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++.+++.+.. .++..+.+|+.| .+.+.++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA-GAQLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFG 77 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 46899999 699999999999876 478999999988776655432 246678899998 777776665
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 78 ~id~vi~~ag~ 88 (263)
T PRK06181 78 GIDILVNNAGI 88 (263)
T ss_pred CCCEEEECCCc
Confidence 57999999743
|
|
| >PF04455 Saccharop_dh_N: LOR/SDH bifunctional enzyme conserved region ; InterPro: IPR007545 Lysine-oxoglutarate reductase/Saccharopine dehydrogenase (LOR/SDH) is a bifunctional enzyme | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.00023 Score=69.37 Aligned_cols=43 Identities=16% Similarity=0.109 Sum_probs=30.6
Q ss_pred ccccccchhccccCCCCcccccCCChhHHHHHHhccCCcCCccccchhhhhhhhcccccc
Q psy12817 499 DIDKDKFISFVQSDASKPIEEHNFSPAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKA 558 (1201)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~s~~ 558 (1201)
+++|||||++++|.++|.|.++| | +|+..+|.++++-++.||+
T Consensus 7 eL~GHLiDSgil~~vLD~I~d~G-------------G----~F~i~~~~vG~~~~d~S~a 49 (103)
T PF04455_consen 7 ELEGHLIDSGILNRVLDIIMDMG-------------G----DFEILEFDVGKSKDDTSYA 49 (103)
T ss_dssp EEEE--TTSSHHHHHHHHHHHTT------------------EEEEEEEE--SSTTS-EEE
T ss_pred EEEEeeechhhHHHHHHHHHhcC-------------C----CEEEEEEEeCCCCCCceeE
Confidence 45679999999999777666654 7 9999999999999888884
|
This conserved region is commonly found immediately N-terminal to saccharopine dehydrogenase conserved region (IPR005097 from INTERPRO) in eukaryotes [, ].; PDB: 3C2Q_B 3MGJ_A. |
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.013 Score=63.54 Aligned_cols=76 Identities=14% Similarity=0.254 Sum_probs=59.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+++++|.| +|.+|+.+++.|++.+ .+|++.+|+.++++++.... + ++..+.+|++| .+.+.++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKG-RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 47899999 7999999999999874 78999999998877665432 2 46678899998 777766554
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~~id~vi~~ag~ 91 (248)
T PRK08251 79 LGGLDRVIVNAGI 91 (248)
T ss_pred cCCCCEEEECCCc
Confidence 57999998753
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.014 Score=62.86 Aligned_cols=77 Identities=21% Similarity=0.367 Sum_probs=61.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
++++++|.| +|.+|+.+++.|++++ ..|++.+|+.++++++....+ ++..+.+|+.| .+.+.++++ ..
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQG-AIVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 468999999 7999999999999874 688888999888887765542 46778899998 777776643 47
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999999753
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.011 Score=64.59 Aligned_cols=74 Identities=16% Similarity=0.366 Sum_probs=59.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
|+++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.. .++..+.+|++| ++.+.++++ .
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEE-GANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN--PEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhCC
Confidence 6899999 689999999999986 568999999988877765543 246778899998 777776554 4
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
.|+||++..
T Consensus 79 id~lI~~ag 87 (252)
T PRK07677 79 IDALINNAA 87 (252)
T ss_pred ccEEEECCC
Confidence 699999975
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.011 Score=65.64 Aligned_cols=76 Identities=16% Similarity=0.227 Sum_probs=61.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
++.|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++++.+.+..+ .+..+.+|++| .+.+.++++ ..|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALER-GDRVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 46899999 799999999999887 5789999999988887766543 46778899998 777766654 469
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 80 ~vi~~ag~ 87 (275)
T PRK08263 80 IVVNNAGY 87 (275)
T ss_pred EEEECCCC
Confidence 99999853
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.012 Score=63.54 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=60.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---CCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---SADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---~~DVVIs 639 (1201)
..++|+|+| +|.+|+.+++.|++.+..+|++++|+.+++++ .-.++.++..|+.| .+.+.++++ ..|+||+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~--~~~~~~~~~~~~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD--PASVAAAAEAASDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC--HHHHHHHHHhcCCCCEEEE
Confidence 357899999 79999999999998753389999999887664 12357888999998 778877776 4799999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 9854
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.013 Score=64.09 Aligned_cols=78 Identities=14% Similarity=0.212 Sum_probs=61.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.++++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++.+.+.+ .++..+.+|++| .+.+.++++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 85 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGA-GAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAE 85 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence 4578999999 699999999999986 579999999988776665433 247788999998 777766654
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 86 ~~~id~vi~~ag~ 98 (256)
T PRK06124 86 HGRLDILVNNVGA 98 (256)
T ss_pred cCCCCEEEECCCC
Confidence 35899998753
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.013 Score=64.52 Aligned_cols=77 Identities=17% Similarity=0.294 Sum_probs=61.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR------S 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~------~ 633 (1201)
+.++|+|.| +|.+|+.+++.|+++ +.+|++++|+.++++.+.... .++..+.+|+.| .+.+.++++ .
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAA-GARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS--EAGREAVLARAREMGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHhcCC
Confidence 357899999 799999999999987 578999999998887766542 257788899998 777665543 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 7999999753
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.015 Score=64.70 Aligned_cols=95 Identities=16% Similarity=0.107 Sum_probs=60.9
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCe--eEEEeecCC
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRV--EATLIDVNN 621 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v--~~v~lDV~D 621 (1201)
||+|+|+|.+|..+++.|+..+--+++++|.+. .|++.+++ ..|.+ .+...++.+
T Consensus 1 kVlvvG~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~ 80 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP 80 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence 699999999999999999998666788887542 13333222 23443 334344432
Q ss_pred CCchH-HHhhccCCcEEEEcCCCcc-cHHHHHHHHHcCCeEEEc
Q psy12817 622 GGSDN-LSGLVRSADLVVSLLPYNL-HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 622 ~~~e~-L~elI~~~DVVIs~lP~~~-h~~VakacIeaGkh~VD~ 663 (1201)
.+. -.+++++.|+||+|+-... ...+.+.|.+.++.+++.
T Consensus 81 --~~~~~~~f~~~~DvVi~a~Dn~~aR~~ln~~c~~~~iplI~~ 122 (234)
T cd01484 81 --EQDFNDTFFEQFHIIVNALDNIIARRYVNGMLIFLIVPLIES 122 (234)
T ss_pred --hhhchHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 122 2467889999999985432 234556666666666664
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.015 Score=63.07 Aligned_cols=75 Identities=16% Similarity=0.240 Sum_probs=58.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhh-------cc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGL-------VR 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~el-------I~ 632 (1201)
+++|+|.| +|.+|+.+++.|.++ +.+|++++|+.++.+++.... .++..+.+|+.| .+++.++ +.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA-GANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence 46899999 699999999999987 468999999988877766543 246778899998 7755443 34
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 78 ~~d~vi~~a~ 87 (255)
T TIGR01963 78 GLDILVNNAG 87 (255)
T ss_pred CCCEEEECCC
Confidence 5799999874
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.031 Score=67.23 Aligned_cols=121 Identities=15% Similarity=0.199 Sum_probs=83.0
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCC-CeEE--EEeCCHHHHHHHHHHcCCeeEEEe-ecC------------------
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDEN-IHIT--LGSLLKEDIDKVTNEFGRVEATLI-DVN------------------ 620 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~-~~Vt--VadR~~ekAe~La~~~~~v~~v~l-DV~------------------ 620 (1201)
.+|||.|+|+ |.||..+++-+.+.++ ++|. .+.++.+.+.+.+.+|. -+.+.+ |-.
T Consensus 56 ~~KkI~ILGSTGSIGtqtLdVI~~~pd~f~vvaLaag~Ni~lL~~q~~~f~-p~~v~v~d~~~~~~l~~~l~~~~~~~~v 134 (454)
T PLN02696 56 GPKPISLLGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVRKFK-PKLVAVRNESLVDELKEALADLDDKPEI 134 (454)
T ss_pred CccEEEEecCCcHhhHHHHHHHHhCccccEEEEEECCCCHHHHHHHHHHhC-CCEEEEcCHHHHHHHHHhhcCCCCCcEE
Confidence 4589999996 9999999999887644 5543 45677877777777662 222211 110
Q ss_pred -CCCchHHHhhcc--CCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEe
Q psy12817 621 -NGGSDNLSGLVR--SADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 621 -D~~~e~L~elI~--~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~ 686 (1201)
- ..+.+.+++. ++|+||+++-......-..+||++|+++..+. -+...-..+.+.|++.|+.+++
T Consensus 135 l~-G~egl~~la~~~evDiVV~AIvG~aGL~pTl~AIkaGK~VALANKESLV~aG~lI~~~ak~~~~~IlP 204 (454)
T PLN02696 135 IP-GEEGIVEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHGVKILP 204 (454)
T ss_pred EE-CHHHHHHHHcCCCCCEEEEeCccccchHHHHHHHHCCCcEEEecHHHHHhhHHHHHHHHHHcCCeEee
Confidence 0 0245566665 57999999976656555688999999988874 2223334566778999999988
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.016 Score=73.33 Aligned_cols=98 Identities=14% Similarity=0.204 Sum_probs=70.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHH----cCC--eeEEEe
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNE----FGR--VEATLI 617 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~----~~~--v~~v~l 617 (1201)
.+..+|+|+|+|.+|..++.+|++.+--+++++|.+. .|++.+++. .|. ++++..
T Consensus 41 L~~~~VlIvG~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~ 120 (679)
T PRK14851 41 LAEAKVAIPGMGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPA 120 (679)
T ss_pred HhcCeEEEECcCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEec
Confidence 5578999999999999999999998655677776421 133333332 244 334444
Q ss_pred ecCCCCchHHHhhccCCcEEEEcCCCc-c--cHHHHHHHHHcCCeEEEc
Q psy12817 618 DVNNGGSDNLSGLVRSADLVVSLLPYN-L--HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 618 DV~D~~~e~L~elI~~~DVVIs~lP~~-~--h~~VakacIeaGkh~VD~ 663 (1201)
.++ .+.+.++++++|+||+|+-+. + ...+.+.|.+.++.+|+.
T Consensus 121 ~i~---~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~iP~i~~ 166 (679)
T PRK14851 121 GIN---ADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKGIPVITA 166 (679)
T ss_pred CCC---hHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCCCCEEEe
Confidence 454 467888999999999999642 2 245788999999999976
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0077 Score=70.25 Aligned_cols=92 Identities=20% Similarity=0.187 Sum_probs=64.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..+||.|+| +|++|+.+++.|.+ .+..++..+....+.-+.+. +.+. ...+. + .+.. .++++|+|+.|
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~--~~~~-~~~v~--~--~~~~--~~~~~Dvvf~a 73 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR--FGGK-SVTVQ--D--AAEF--DWSQAQLAFFV 73 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE--ECCc-ceEEE--e--Cchh--hccCCCEEEEC
Confidence 457999999 69999999999998 67788665543322222222 2121 11121 1 1111 12579999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|.....+++..+.++|+.+||.|
T Consensus 74 ~p~~~s~~~~~~~~~~g~~VIDlS 97 (336)
T PRK08040 74 AGREASAAYAEEATNAGCLVIDSS 97 (336)
T ss_pred CCHHHHHHHHHHHHHCCCEEEECC
Confidence 999888999999999999999997
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.019 Score=65.45 Aligned_cols=77 Identities=17% Similarity=0.225 Sum_probs=53.5
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----------CCeeE-------EEeecCCCCchH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----------GRVEA-------TLIDVNNGGSDN 626 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----------~~v~~-------v~lDV~D~~~e~ 626 (1201)
.++||.|||+|.||..++..++.. +++|++.|++++.+++..+.. ...+. -.+.+.+ +
T Consensus 4 ~~~~V~ViGaG~mG~~iA~~~a~~-G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~----~ 78 (286)
T PRK07819 4 AIQRVGVVGAGQMGAGIAEVCARA-GVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTT----D 78 (286)
T ss_pred CccEEEEEcccHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeC----C
Confidence 357999999999999999999876 689999999999876622211 01100 0011122 3
Q ss_pred HHhhccCCcEEEEcCCCccc
Q psy12817 627 LSGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 627 L~elI~~~DVVIs~lP~~~h 646 (1201)
+ +.++++|+||.|+|-...
T Consensus 79 ~-~~~~~~d~ViEav~E~~~ 97 (286)
T PRK07819 79 L-GDFADRQLVIEAVVEDEA 97 (286)
T ss_pred H-HHhCCCCEEEEecccCHH
Confidence 4 346899999999997654
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.014 Score=66.64 Aligned_cols=77 Identities=9% Similarity=0.126 Sum_probs=61.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
.+.+.++|.| +|.+|..+++.|++. +.+|++++|+.+++++..+++ + ++.++.+|+.| .++++++++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~ 88 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAA-GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLR 88 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHH
Confidence 4568999999 699999999999987 579999999988776655432 2 46778999998 777776654
Q ss_pred ----CCcEEEEcCC
Q psy12817 633 ----SADLVVSLLP 642 (1201)
Q Consensus 633 ----~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 89 ~~~~~iD~li~nAG 102 (313)
T PRK05854 89 AEGRPIHLLINNAG 102 (313)
T ss_pred HhCCCccEEEECCc
Confidence 3799999875
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0073 Score=70.51 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=65.1
Q ss_pred eEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
||+|+| +|++|+.+++.|.+ .+..++.+..+..+..+.+. +.+......|+. .. .++++|+|+.|+|.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~--~~~~~~~~~~~~------~~-~~~~~D~v~~a~g~ 71 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT--FKGKELEVNEAK------IE-SFEGIDIALFSAGG 71 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee--eCCeeEEEEeCC------hH-HhcCCCEEEECCCH
Confidence 689999 79999999999988 45566666655544434333 223344444432 12 23689999999999
Q ss_pred cccHHHHHHHHHcCCeEEEcc
Q psy12817 644 NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~S 664 (1201)
....+++...+++|+.+||.|
T Consensus 72 ~~s~~~a~~~~~~G~~VID~s 92 (339)
T TIGR01296 72 SVSKEFAPKAAKCGAIVIDNT 92 (339)
T ss_pred HHHHHHHHHHHHCCCEEEECC
Confidence 888999999999999999986
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.014 Score=64.00 Aligned_cols=78 Identities=14% Similarity=0.192 Sum_probs=61.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|..+++.|++. +.+|++++|+.++++.+.... .++..+.+|++| .+.++++++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~ 86 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEA-GARVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLER 86 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 4568999999 799999999999986 578999999988776655433 246678899998 777765553
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 87 ~~~id~vi~~ag~ 99 (259)
T PRK08213 87 FGHVDILVNNAGA 99 (259)
T ss_pred hCCCCEEEECCCC
Confidence 47999999864
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.013 Score=64.16 Aligned_cols=77 Identities=14% Similarity=0.225 Sum_probs=61.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
..++++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++..+. .++..+.+|+.| .+.+.+++.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~-G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEY-GAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH--KQEVEAAIEHIEKDI 84 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC--HHHHHHHHHHHHHhc
Confidence 467899999 699999999999986 578999999988877766543 235667899998 777776654
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 85 ~~id~vi~~ag~ 96 (254)
T PRK08085 85 GPIDVLINNAGI 96 (254)
T ss_pred CCCCEEEECCCc
Confidence 37999999853
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.014 Score=62.75 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=60.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc---c--CCcEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV---R--SADLVV 638 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI---~--~~DVVI 638 (1201)
|++++|.| +|.+|+.+++.|++. +.+|++++|+.+.++++... ++..+.+|++| .+.+++++ . ..|+||
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~-G~~v~~~~r~~~~~~~~~~~--~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD-GWRVIATARDAAALAALQAL--GAEALALDVAD--PASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC-CCEEEEEECCHHHHHHHHhc--cceEEEecCCC--HHHHHHHHHHhcCCCCCEEE
Confidence 67899999 799999999999876 67899999999888776642 56788999998 77777653 2 379999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 76 ~~ag~ 80 (222)
T PRK06953 76 YVAGV 80 (222)
T ss_pred ECCCc
Confidence 98753
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.019 Score=64.86 Aligned_cols=78 Identities=22% Similarity=0.312 Sum_probs=62.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhcc------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.++ .+..+.+|++| .+++.++++
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHAR-GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERF 83 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHc
Confidence 3468999999 699999999999886 5789999999999888877653 24455699998 777766653
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 84 g~id~vI~nAG~ 95 (296)
T PRK05872 84 GGIDVVVANAGI 95 (296)
T ss_pred CCCCEEEECCCc
Confidence 47999999853
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.023 Score=64.80 Aligned_cols=74 Identities=16% Similarity=0.171 Sum_probs=53.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHH----HHHHHHc-CCeeEEEeecCCCCchHHHhhcc--CCcEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDI----DKVTNEF-GRVEATLIDVNNGGSDNLSGLVR--SADLV 637 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekA----e~La~~~-~~v~~v~lDV~D~~~e~L~elI~--~~DVV 637 (1201)
|||+|+| +|++|+.+++.|.+. +.+|++++|..... ..+.... .++..+..|+.| .+.+.++++ ++|+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~d~v 77 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN-GHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN--EALLTEILHDHAIDTV 77 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCC--HHHHHHHHhcCCCCEE
Confidence 5899999 699999999999986 57888887642211 1111111 235667899998 778888776 58999
Q ss_pred EEcCC
Q psy12817 638 VSLLP 642 (1201)
Q Consensus 638 Is~lP 642 (1201)
|++..
T Consensus 78 vh~a~ 82 (338)
T PRK10675 78 IHFAG 82 (338)
T ss_pred EECCc
Confidence 99974
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.013 Score=67.80 Aligned_cols=73 Identities=21% Similarity=0.288 Sum_probs=54.0
Q ss_pred cccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 559 DIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 559 ~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
+++..+.++|+|||.|.+|+++++.|... +++|++.+|.. +....+... +++. ..+.++++++|+|+
T Consensus 10 ~~~~LkgKtVGIIG~GsIG~amA~nL~d~-G~~ViV~~r~~-~s~~~A~~~-G~~v----------~sl~Eaak~ADVV~ 76 (335)
T PRK13403 10 NVELLQGKTVAVIGYGSQGHAQAQNLRDS-GVEVVVGVRPG-KSFEVAKAD-GFEV----------MSVSEAVRTAQVVQ 76 (335)
T ss_pred ChhhhCcCEEEEEeEcHHHHHHHHHHHHC-cCEEEEEECcc-hhhHHHHHc-CCEE----------CCHHHHHhcCCEEE
Confidence 34456789999999999999999999875 68999988763 333333332 3321 14778888999999
Q ss_pred EcCCCc
Q psy12817 639 SLLPYN 644 (1201)
Q Consensus 639 s~lP~~ 644 (1201)
.++|..
T Consensus 77 llLPd~ 82 (335)
T PRK13403 77 MLLPDE 82 (335)
T ss_pred EeCCCh
Confidence 999963
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.018 Score=69.32 Aligned_cols=77 Identities=18% Similarity=0.251 Sum_probs=57.0
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH--------------------HHHHHHHH-cCCeeEEEeec
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE--------------------DIDKVTNE-FGRVEATLIDV 619 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e--------------------kAe~La~~-~~~v~~v~lDV 619 (1201)
..++|+|+|.| +|++|+.+++.|+++ +++|+++|+... +++.+... -.+++.+..|+
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKR-GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 35678999999 799999999999986 578888764211 11111111 12578889999
Q ss_pred CCCCchHHHhhccC--CcEEEEcC
Q psy12817 620 NNGGSDNLSGLVRS--ADLVVSLL 641 (1201)
Q Consensus 620 ~D~~~e~L~elI~~--~DVVIs~l 641 (1201)
.| .+.+.+++++ +|+||++.
T Consensus 123 ~d--~~~v~~~l~~~~~D~ViHlA 144 (442)
T PLN02572 123 CD--FEFLSEAFKSFEPDAVVHFG 144 (442)
T ss_pred CC--HHHHHHHHHhCCCCEEEECC
Confidence 98 8889888874 79999987
|
|
| >PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.01 Score=69.22 Aligned_cols=83 Identities=16% Similarity=0.165 Sum_probs=58.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEE--------EeecCCCCchHHHhhccCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEAT--------LIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v--------~lDV~D~~~e~L~elI~~~ 634 (1201)
..|+||.|||+|.+|..++..|++.+ ++++..|+++.++.+.+...+.... .+.++ .++.+.++++
T Consensus 5 ~~~mkI~IiGaGa~G~alA~~La~~g--~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t----~d~~~a~~~a 78 (341)
T PRK12439 5 KREPKVVVLGGGSWGTTVASICARRG--PTLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRAT----TDFAEAANCA 78 (341)
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCC--CEEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEE----CCHHHHHhcC
Confidence 45789999999999999999999875 4667779999888877542111110 11222 2455667899
Q ss_pred cEEEEcCCCcccHHHHH
Q psy12817 635 DLVVSLLPYNLHHHVAE 651 (1201)
Q Consensus 635 DVVIs~lP~~~h~~Vak 651 (1201)
|+||.++|......+++
T Consensus 79 DlVilavps~~~~~vl~ 95 (341)
T PRK12439 79 DVVVMGVPSHGFRGVLT 95 (341)
T ss_pred CEEEEEeCHHHHHHHHH
Confidence 99999999665544444
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.014 Score=63.88 Aligned_cols=76 Identities=17% Similarity=0.225 Sum_probs=59.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++.+.+.... .++..+.+|++| .+.+..++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 78 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE-GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS--EQSVLALSRGVDEI 78 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC--HHHHHHHHHHHHHH
Confidence 46799999 699999999999987 578999999988776665432 247788999998 777766654
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~~id~vv~~ag~ 91 (259)
T PRK12384 79 FGRVDLLVYNAGI 91 (259)
T ss_pred cCCCCEEEECCCc
Confidence 46999999753
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.014 Score=64.84 Aligned_cols=76 Identities=11% Similarity=0.249 Sum_probs=59.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
++|+++|.| +|.+|+.+++.|++. +.+|++++|+ ++++++.+.+ .++..+.+|++| .+++.++++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~-G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQE-GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 468999999 699999999999987 5789999999 6666555443 247788999998 777766554
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 81 g~id~li~~Ag~ 92 (272)
T PRK08589 81 GRVDVLFNNAGV 92 (272)
T ss_pred CCcCEEEECCCC
Confidence 36999999753
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.027 Score=63.60 Aligned_cols=80 Identities=18% Similarity=0.192 Sum_probs=53.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeE----EEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEA----TLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~----v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
|||+|||+|.+|..++..|.+. +.+|++.+|+.+..+.+.+. +... ....+.- .++..+. +++|+||.|+
T Consensus 1 m~I~IiG~G~~G~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~--g~~~~~~~~~~~~~~--~~~~~~~-~~~d~vila~ 74 (304)
T PRK06522 1 MKIAILGAGAIGGLFGAALAQA-GHDVTLVARRGAHLDALNEN--GLRLEDGEITVPVLA--ADDPAEL-GPQDLVILAV 74 (304)
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEECChHHHHHHHHc--CCcccCCceeecccC--CCChhHc-CCCCEEEEec
Confidence 5899999999999999999976 57899999988887776643 2211 0000000 1123333 7899999999
Q ss_pred CCcccHHHHH
Q psy12817 642 PYNLHHHVAE 651 (1201)
Q Consensus 642 P~~~h~~Vak 651 (1201)
|......+++
T Consensus 75 k~~~~~~~~~ 84 (304)
T PRK06522 75 KAYQLPAALP 84 (304)
T ss_pred ccccHHHHHH
Confidence 8654444333
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.023 Score=63.62 Aligned_cols=74 Identities=19% Similarity=0.287 Sum_probs=54.0
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHH--cCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNE--FGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~--~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
||+|+| +|++|+.+++.|.+. +.+|++.+|.... .+.+... .++++.+..|+.+ .+.+.++++ +.|+||++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~-g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES-GHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRD--RELLDRLFEEHKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC-CCeEEEEeCCCccchhhhhhhccccceEEEECCCCC--HHHHHHHHHhCCCcEEEEC
Confidence 689999 799999999999886 4678777654322 2222211 1246678899998 788888876 68999999
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 78 ag~ 80 (328)
T TIGR01179 78 AGL 80 (328)
T ss_pred ccc
Confidence 854
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.015 Score=62.64 Aligned_cols=77 Identities=10% Similarity=0.271 Sum_probs=60.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhccC------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVRS------ 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~~------ 633 (1201)
+.++|+|.| +|.+|..+++.|.+. +.+|++.+|+.++++.+.... .++..+..|+.| .+.+.+++++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS--TESARNVIEKAAKVLN 80 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 357999999 699999999999876 578999999998887764433 256788899998 7777665543
Q ss_pred -CcEEEEcCCC
Q psy12817 634 -ADLVVSLLPY 643 (1201)
Q Consensus 634 -~DVVIs~lP~ 643 (1201)
.|.+|++...
T Consensus 81 ~id~ii~~ag~ 91 (238)
T PRK05786 81 AIDGLVVTVGG 91 (238)
T ss_pred CCCEEEEcCCC
Confidence 5888888753
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.014 Score=64.76 Aligned_cols=57 Identities=25% Similarity=0.434 Sum_probs=47.8
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCC--cEEEEcCCC
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSA--DLVVSLLPY 643 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~--DVVIs~lP~ 643 (1201)
||+|+| +|++|+.+++.|.+. +++|++.+|. ..|+.| .+.+.++++++ |+||+|...
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~-g~~v~~~~r~-----------------~~d~~~--~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE-GRVVVALTSS-----------------QLDLTD--PEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc-CCEEEEeCCc-----------------ccCCCC--HHHHHHHHHhCCCCEEEECCcc
Confidence 689999 699999999999986 5789988885 257777 78898888876 999999853
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.011 Score=69.16 Aligned_cols=110 Identities=9% Similarity=-0.029 Sum_probs=71.3
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccc-cccccCcccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDY-QEYNENPSLY 270 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~-~ey~~~pe~y 270 (1201)
.+.-.++.|+|.|++|+...+.++.+|. ++.+|+....... ....+-+... ..+.. +.+
T Consensus 156 ~l~gktvGIiG~G~IG~~vA~~l~afG~----------------~V~~~dr~~~~~~--~~~~~~~~~~~~~~~~--~~~ 215 (347)
T PLN02928 156 TLFGKTVFILGYGAIGIELAKRLRPFGV----------------KLLATRRSWTSEP--EDGLLIPNGDVDDLVD--EKG 215 (347)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhCCC----------------EEEEECCCCChhh--hhhhcccccccccccc--ccC
Confidence 4556899999999999999999999994 3455543211111 0000000000 00000 000
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCC
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGS 342 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGs 342 (1201)
...-.+++++.+|+|++++-..+.+-.+|+.+.++. |||| ++|++++ .|+-
T Consensus 216 ~~~~L~ell~~aDiVvl~lPlt~~T~~li~~~~l~~-Mk~g------------------a~lINva--RG~l 266 (347)
T PLN02928 216 GHEDIYEFAGEADIVVLCCTLTKETAGIVNDEFLSS-MKKG------------------ALLVNIA--RGGL 266 (347)
T ss_pred cccCHHHHHhhCCEEEECCCCChHhhcccCHHHHhc-CCCC------------------eEEEECC--Cccc
Confidence 001124678899999999998888899999999999 9999 8999987 4443
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.076 Score=57.27 Aligned_cols=77 Identities=21% Similarity=0.310 Sum_probs=56.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC----CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL----LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR----~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
++++|+|.| +|.+|+.+++.|+++ +.+|++.+| +.+..+.+..+. .++..+..|+.| .+.+.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~ 81 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAAD-GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRD--FAATRAALDAG 81 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHH
Confidence 458999999 799999999999986 567777554 445555444332 246788899998 777776653
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 82 ~~~~~~~d~vi~~ag~ 97 (249)
T PRK12827 82 VEEFGRLDILVNNAGI 97 (249)
T ss_pred HHHhCCCCEEEECCCC
Confidence 57999999853
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.023 Score=63.31 Aligned_cols=77 Identities=16% Similarity=0.276 Sum_probs=64.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhc-------cCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLV-------RSA 634 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI-------~~~ 634 (1201)
.|-|+|-| +..+|.++++.|++. +++|.++.|..+++++++.+++ .+.+..+||+| .+++++++ .+.
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCcc
Confidence 45678889 579999999999986 6899999999999999999996 47889999999 76655554 468
Q ss_pred cEEEEcCCCc
Q psy12817 635 DLVVSLLPYN 644 (1201)
Q Consensus 635 DVVIs~lP~~ 644 (1201)
|++||-..-.
T Consensus 83 DiLvNNAGl~ 92 (246)
T COG4221 83 DILVNNAGLA 92 (246)
T ss_pred cEEEecCCCC
Confidence 9999987543
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.018 Score=67.09 Aligned_cols=68 Identities=18% Similarity=0.239 Sum_probs=51.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||.|.||+.+++.|... +.+|.++||+..... ...+ ++. ...++++++++|+|+.++|
T Consensus 148 L~gktvgIiG~G~IG~~vA~~l~~~-G~~V~~~d~~~~~~~--~~~~-~~~----------~~~l~ell~~aDiV~l~lP 213 (333)
T PRK13243 148 VYGKTIGIIGFGRIGQAVARRAKGF-GMRILYYSRTRKPEA--EKEL-GAE----------YRPLEELLRESDFVSLHVP 213 (333)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC-CCEEEEECCCCChhh--HHHc-CCE----------ecCHHHHHhhCCEEEEeCC
Confidence 4579999999999999999999876 578999999865432 2222 221 1247788899999999999
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 214 ~t 215 (333)
T PRK13243 214 LT 215 (333)
T ss_pred CC
Confidence 64
|
|
| >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.026 Score=62.53 Aligned_cols=113 Identities=16% Similarity=0.228 Sum_probs=74.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeC----------CHHHHHHHHHHcCCeeEE--EeecCCCCchHHH
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSL----------LKEDIDKVTNEFGRVEAT--LIDVNNGGSDNLS 628 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR----------~~ekAe~La~~~~~v~~v--~lDV~D~~~e~L~ 628 (1201)
+.+.++|+|.|.|.||+.+++.|.+. +.+|+ |+|. +.+++.+.......+... ...+. .+.+-
T Consensus 28 ~l~~~~v~I~G~G~VG~~~a~~L~~~-g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~~---~~~i~ 103 (227)
T cd01076 28 GLAGARVAIQGFGNVGSHAARFLHEA-GAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERIT---NEELL 103 (227)
T ss_pred CccCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceecC---Cccce
Confidence 45679999999999999999999886 57765 8888 777777665544221110 00111 22333
Q ss_pred hhccCCcEEEEcCC-CcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEe
Q psy12817 629 GLVRSADLVVSLLP-YNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 629 elI~~~DVVIs~lP-~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~ 686 (1201)
.. ++|++|-|.+ ...+..-+. +.++.+|... .++++ -++.-+++|+.+++
T Consensus 104 ~~--~~Dvlip~a~~~~i~~~~~~---~l~a~~I~egAN~~~t~~---a~~~L~~rGi~~~P 157 (227)
T cd01076 104 EL--DCDILIPAALENQITADNAD---RIKAKIIVEAANGPTTPE---ADEILHERGVLVVP 157 (227)
T ss_pred ee--cccEEEecCccCccCHHHHh---hceeeEEEeCCCCCCCHH---HHHHHHHCCCEEEC
Confidence 32 7999999984 445655444 3356777764 34443 33446789999987
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.017 Score=63.61 Aligned_cols=77 Identities=17% Similarity=0.249 Sum_probs=59.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH----cC--CeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE----FG--RVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~----~~--~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
+.+.++|.| +|.+|+.+++.|++. +.+|++++|+.+++++..+. ++ ++..+.+|++| .+++.++++
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEA-GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 457899999 689999999999987 57899999998877665443 22 35678899998 777766553
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 46999999853
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.019 Score=62.23 Aligned_cols=75 Identities=12% Similarity=0.223 Sum_probs=58.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITL-GSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtV-adR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+++++|.| +|.+|+.+++.|++. +.+|++ .+|+.++++++.+.. .++..+.+|++| ++++.++++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~-g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEE-GYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD--VEKIKEMFAQIDEEF 80 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 47899999 799999999999987 466654 688887776655433 246778899998 777777665
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 81 ~~id~vi~~ag 91 (250)
T PRK08063 81 GRLDVFVNNAA 91 (250)
T ss_pred CCCCEEEECCC
Confidence 4799999875
|
|
| >TIGR02130 dapB_plant dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.038 Score=62.84 Aligned_cols=126 Identities=13% Similarity=0.157 Sum_probs=79.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccC-Cc-EEEEcC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS-AD-LVVSLL 641 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~-~D-VVIs~l 641 (1201)
.||+|.| .|+||+.+++.+.+ .+++++-+..+.. ..+.+.. +.+......-.+| ....+.+++.. +| |||+-+
T Consensus 1 ~~V~V~Ga~GkMG~~v~~av~~-~~~~Lv~~~~~~~~~~~~~~~-~~g~~v~v~~~~~-~~~~l~~~~~~~~d~VvIDFT 77 (275)
T TIGR02130 1 IQIMVNGCPGKMGKAVAEAADA-AGLEIVPTSFGGEEEAENEAE-VAGKEILLHGPSE-REARIGEVFAKYPELICIDYT 77 (275)
T ss_pred CeEEEeCCCChHHHHHHHHHhc-CCCEEEeeEccccccccchhh-hcccceeeecccc-ccccHHHHHhhcCCEEEEECC
Confidence 3799999 69999999999887 7888765422221 1111111 1111111111122 23467777766 89 999998
Q ss_pred CCcccHHHHHHHHHcCCeEEEc--cCChHHHHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTA--SYLSPEMMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~--Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
-+..-...++.|+++|+++|.- .+..+++.++ ++++++.++..--|.-|+.-|
T Consensus 78 ~P~~~~~n~~~~~~~gv~~ViGTTG~~~~~~~~l---~~~~~i~~l~apNfSiGv~ll 132 (275)
T TIGR02130 78 HPSAVNDNAAFYGKHGIPFVMGTTGGDREALAKL---VADAKHPAVIAPNMAKQIVAF 132 (275)
T ss_pred ChHHHHHHHHHHHHCCCCEEEcCCCCCHHHHHHH---HHhcCCCEEEECcccHHHHHH
Confidence 5555677899999999998874 3565666666 344567666665666676533
|
This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome. |
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.017 Score=64.57 Aligned_cols=74 Identities=15% Similarity=0.262 Sum_probs=57.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------CCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------SAD 635 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------~~D 635 (1201)
|.++|-|+|.+|+.+++.|. . +.+|++++|+.++++++.+.+ .++..+.+|++| .+.+.++++ ..|
T Consensus 3 k~~lItGa~gIG~~la~~l~-~-G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-A-GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPVT 78 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCCC
Confidence 45566679999999999995 3 689999999988776665433 246778899998 777776664 479
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999864
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.008 Score=68.16 Aligned_cols=58 Identities=19% Similarity=0.419 Sum_probs=43.4
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~lP 642 (1201)
|||+|+| .|++|+.++++|.++ ++++...+|. .+|+.| .+.+.+++++ .|+||+|..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~-~~~v~~~~r~-----------------~~dl~d--~~~~~~~~~~~~pd~Vin~aa 60 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER-GYEVIATSRS-----------------DLDLTD--PEAVAKLLEAFKPDVVINCAA 60 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT-SEEEEEESTT-----------------CS-TTS--HHHHHHHHHHH--SEEEE---
T ss_pred CEEEEECCCCHHHHHHHHHHhhC-CCEEEEeCch-----------------hcCCCC--HHHHHHHHHHhCCCeEeccce
Confidence 6999999 699999999999874 5677777776 357777 7888888774 899999985
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 61 ~ 61 (286)
T PF04321_consen 61 Y 61 (286)
T ss_dssp -
T ss_pred e
Confidence 4
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.032 Score=68.71 Aligned_cols=108 Identities=13% Similarity=0.082 Sum_probs=68.6
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+...+|+|+|+|..|..++..+...|+. .+.|++....+.+.+....++. . ..+ ..+.+
T Consensus 264 l~~kkVlVIGAG~mG~~~a~~L~~~G~~---------------~V~V~nRs~era~~La~~~~g~-~-i~~----~~~~d 322 (519)
T PLN00203 264 HASARVLVIGAGKMGKLLVKHLVSKGCT---------------KMVVVNRSEERVAALREEFPDV-E-IIY----KPLDE 322 (519)
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHhCCCC---------------eEEEEeCCHHHHHHHHHHhCCC-c-eEe----ecHhh
Confidence 6678999999999999999988877742 4677776666666555543321 0 000 01111
Q ss_pred hhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccC
Q psy12817 273 LFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISAD 338 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D 338 (1201)
..+.+..+|+||+|. +..+.+|+.++++.+ +++.. ..| |-.+|+|||..
T Consensus 323 --l~~al~~aDVVIsAT---~s~~pvI~~e~l~~~-~~~~~-----~~~------~~~~~IDLAvP 371 (519)
T PLN00203 323 --MLACAAEADVVFTST---SSETPLFLKEHVEAL-PPASD-----TVG------GKRLFVDISVP 371 (519)
T ss_pred --HHHHHhcCCEEEEcc---CCCCCeeCHHHHHHh-hhccc-----ccC------CCeEEEEeCCC
Confidence 124567899999986 223348899999994 33200 001 22789999974
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.018 Score=63.80 Aligned_cols=77 Identities=13% Similarity=0.150 Sum_probs=58.6
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
..+.++++|.| +|.+|+.+++.|++. +.+|++.+|+. +..+. .... ....+.+|++| .+.+.+.+.+.|++|+
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~-G~~Vi~~~r~~~~~~~~-~~~~-~~~~~~~D~~~--~~~~~~~~~~iDilVn 85 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAK-GAKVIGLTHSKINNSES-NDES-PNEWIKWECGK--EESLDKQLASLDVLIL 85 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEECCchhhhhh-hccC-CCeEEEeeCCC--HHHHHHhcCCCCEEEE
Confidence 34568999999 699999999999886 47888889886 33222 1111 23567899998 7888888889999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9853
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.023 Score=62.97 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=59.8
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
|+|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++++.+.... .++..+.+|+.| .+.+.++++ .
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~ 77 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE-GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGG 77 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 4799999 699999999999986 578999999988877655432 346778899998 777776654 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 78 id~lI~~ag~ 87 (270)
T PRK05650 78 IDVIVNNAGV 87 (270)
T ss_pred CCEEEECCCC
Confidence 8999999753
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.013 Score=67.48 Aligned_cols=76 Identities=18% Similarity=0.346 Sum_probs=54.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH--HHHHHHH--cCCeeEEEeecCCCCchHHHhhccC--CcEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED--IDKVTNE--FGRVEATLIDVNNGGSDNLSGLVRS--ADLV 637 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek--Ae~La~~--~~~v~~v~lDV~D~~~e~L~elI~~--~DVV 637 (1201)
|++|+|.| +|++|+.+++.|.+++...+++.++.... ...+... ..++..+.+|+.| .+.+.+++++ +|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD--RAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcC--hHHHHHHHhhcCCCEE
Confidence 68999999 79999999999998753335556654321 1222211 1246778899998 7889988885 8999
Q ss_pred EEcCC
Q psy12817 638 VSLLP 642 (1201)
Q Consensus 638 Is~lP 642 (1201)
|+|..
T Consensus 79 ih~A~ 83 (355)
T PRK10217 79 MHLAA 83 (355)
T ss_pred EECCc
Confidence 99974
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.027 Score=63.88 Aligned_cols=75 Identities=13% Similarity=0.208 Sum_probs=52.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc--------C-C-eeE-------EEeecCCCCchHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF--------G-R-VEA-------TLIDVNNGGSDNL 627 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~--------~-~-v~~-------v~lDV~D~~~e~L 627 (1201)
.+||.|||+|.||..++..|++. +++|++.|++++++++..+.. + + +.. ..+.+.+ .+
T Consensus 4 ~~kI~vIGaG~mG~~iA~~la~~-G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~----~~ 78 (292)
T PRK07530 4 IKKVGVIGAGQMGNGIAHVCALA-GYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTAT----DL 78 (292)
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeC----CH
Confidence 47899999999999999999986 579999999998876643211 0 1 000 0011222 23
Q ss_pred HhhccCCcEEEEcCCCcc
Q psy12817 628 SGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 628 ~elI~~~DVVIs~lP~~~ 645 (1201)
+ .++++|+||.|+|...
T Consensus 79 ~-~~~~aD~Vieavpe~~ 95 (292)
T PRK07530 79 E-DLADCDLVIEAATEDE 95 (292)
T ss_pred H-HhcCCCEEEEcCcCCH
Confidence 3 3679999999999753
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.014 Score=63.48 Aligned_cols=66 Identities=14% Similarity=0.264 Sum_probs=51.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHc-CCeeEEEeecCCCCchHHHhhccC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-EDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVRS 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~~ 633 (1201)
||+|+|+| +|.+|+.+++.|+++ +.+|++.+|+. +.++.+.+.. .++..+.+|++| .+++.+++++
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~ 69 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEK-GTHVISISRTENKELTKLAEQYNSNLTFHSLDLQD--VHELETNFNE 69 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhc-CCEEEEEeCCchHHHHHHHhccCCceEEEEecCCC--HHHHHHHHHH
Confidence 67899999 799999999999987 57899999987 5555555433 357788999998 7777776654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.023 Score=62.71 Aligned_cols=77 Identities=16% Similarity=0.235 Sum_probs=61.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|.+|+.+++.|+++ +.+|++.+|+.++++++.+.+ .++..+.+|++| .+++.+++.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKA-GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 458899999 689999999999986 578989999998877665543 246778999998 777776664
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 37999999854
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.024 Score=63.22 Aligned_cols=77 Identities=19% Similarity=0.301 Sum_probs=60.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+++.++|.| +|.+|+.+++.|+++ +.+|++.+|+.++++++.... .++..+.+|++| .+.+.++++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 84 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAA-GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD--PDSVKSFVAQAEEA 84 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHh
Confidence 3467899999 699999999999986 578989999888776655432 246677889998 788876665
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 85 ~~~id~vi~~Ag 96 (274)
T PRK07775 85 LGEIEVLVSGAG 96 (274)
T ss_pred cCCCCEEEECCC
Confidence 4699999975
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.033 Score=60.67 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=68.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.++|+|+|.|.+|..-++.|.+. +.+|+|++.+.. ..+.++... +++.+.-+.. ...+.++|+||.++
T Consensus 7 l~gk~vlVvGgG~va~rk~~~Ll~~-ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~~~~-------~~dl~~~~lVi~at 77 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKARLLLKA-GAQLRVIAEELESELTLLAEQG-GITWLARCFD-------ADILEGAFLVIAAT 77 (205)
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC-CCEEEEEcCCCCHHHHHHHHcC-CEEEEeCCCC-------HHHhCCcEEEEECC
Confidence 3468999999999999999999986 578999988754 455665543 5665543332 23457899999998
Q ss_pred CCc-ccHHHHHHHHHcCCeEEE
Q psy12817 642 PYN-LHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 642 P~~-~h~~VakacIeaGkh~VD 662 (1201)
... .+..+.+.|-+.|+.+-+
T Consensus 78 ~d~~ln~~i~~~a~~~~ilvn~ 99 (205)
T TIGR01470 78 DDEELNRRVAHAARARGVPVNV 99 (205)
T ss_pred CCHHHHHHHHHHHHHcCCEEEE
Confidence 765 778888998888887733
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.015 Score=62.27 Aligned_cols=77 Identities=21% Similarity=0.234 Sum_probs=56.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.++++|+|+| +|.+|+.+++.|.++ +++|++..| +.+..+.+.... +++..+.+|+.| .+.+.++++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 80 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARA-GADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD--KAALEAAVAAAVE 80 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC--HHHHHHHHHHHHH
Confidence 3468999999 799999999999886 457666444 444444443322 357788899998 777776664
Q ss_pred ---CCcEEEEcCC
Q psy12817 633 ---SADLVVSLLP 642 (1201)
Q Consensus 633 ---~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 81 ~~~~id~vi~~ag 93 (249)
T PRK12825 81 RFGRIDILVNNAG 93 (249)
T ss_pred HcCCCCEEEECCc
Confidence 4699999985
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.024 Score=61.81 Aligned_cols=75 Identities=21% Similarity=0.281 Sum_probs=57.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITL-GSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtV-adR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.++|+|.| +|.+|+.+++.|+++ +.+|.+ ..|+.++++++.... ..+..+.+|++| .+.+.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~-G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLAND-GALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS--IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC--HHHHHHHHHHHHHHh
Confidence 47999999 799999999999987 467765 478887766555433 246678899998 777776655
Q ss_pred -------CCcEEEEcCC
Q psy12817 633 -------SADLVVSLLP 642 (1201)
Q Consensus 633 -------~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 83 ~~~~~~~~id~vi~~ag 99 (254)
T PRK12746 83 QIRVGTSEIDILVNNAG 99 (254)
T ss_pred ccccCCCCccEEEECCC
Confidence 4799999974
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.021 Score=62.50 Aligned_cols=77 Identities=9% Similarity=0.163 Sum_probs=60.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
..|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+++ + ++..+.+|+.+ .+++.+++.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGL-GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 458999999 699999999999986 578999999998887766543 1 35677889998 666655543
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 47999999864
|
|
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.024 Score=64.39 Aligned_cols=40 Identities=13% Similarity=0.295 Sum_probs=35.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKV 605 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~L 605 (1201)
.+||.|||+|.||..++..|+.. +++|++.|++.+.+++.
T Consensus 3 i~~I~ViGaG~mG~~iA~~la~~-G~~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 3 IKVIGVVGSGVMGQGIAQVFART-GYDVTIVDVSEEILKNA 42 (291)
T ss_pred CcEEEEECccHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHH
Confidence 47899999999999999999886 57999999999887653
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.019 Score=63.77 Aligned_cols=74 Identities=11% Similarity=0.144 Sum_probs=57.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
++.++|.| +|.+|+.+++.|+++ +++|++++|+.++++.+.... .++..+.+|++| .+.+++ ++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 46789999 699999999999987 688999999988776664431 246778899998 777654 32
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 79 ~~~id~vv~~ag 90 (280)
T PRK06914 79 IGRIDLLVNNAG 90 (280)
T ss_pred cCCeeEEEECCc
Confidence 4699999975
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.026 Score=61.94 Aligned_cols=77 Identities=12% Similarity=0.175 Sum_probs=58.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++++|+ ++.+++.+.. .++.++.+|+.| .+.+.++++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 88 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKA-GADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEE 88 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3468999999 699999999999986 5788888887 4443333222 246788999998 777777765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 89 ~g~id~li~~ag~ 101 (258)
T PRK06935 89 FGKIDILVNNAGT 101 (258)
T ss_pred cCCCCEEEECCCC
Confidence 57999999753
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.022 Score=61.83 Aligned_cols=78 Identities=14% Similarity=0.161 Sum_probs=57.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.. ++.+..... .++..+.+|+++ .+++.++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA-GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSD--IEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 3468999999 599999999999986 578988898752 222222222 246788999998 777765543
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 80 ~~d~li~~ag~ 90 (248)
T TIGR01832 80 HIDILVNNAGI 90 (248)
T ss_pred CCCEEEECCCC
Confidence 48999999753
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.03 Score=65.70 Aligned_cols=94 Identities=14% Similarity=0.157 Sum_probs=59.8
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
++|+|||+|.||..++..|.+.+ +++.+.+++.++.+..... +.... -+. ...+.++++++|+||.|+|...
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~G-~~v~i~~~~~~~~~~~~a~--~~~~~-~~~----~~~~~~~~~~aDlVilavP~~~ 72 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAAG-PDVFIIGYDPSAAQLARAL--GFGVI-DEL----AADLQRAAAEADLIVLAVPVDA 72 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHh--cCCCC-ccc----ccCHHHHhcCCCEEEEeCCHHH
Confidence 47999999999999999998764 5777777776654432221 11110 011 2346677889999999999765
Q ss_pred cHHHHHHHH----HcCCeEEEccCCh
Q psy12817 646 HHHVAEFCI----QHGKNLVTASYLS 667 (1201)
Q Consensus 646 h~~VakacI----eaGkh~VD~Syvs 667 (1201)
...+.+... +.++-+.|.+-+.
T Consensus 73 ~~~vl~~l~~~~l~~~~ivtDv~SvK 98 (359)
T PRK06545 73 TAALLAELADLELKPGVIVTDVGSVK 98 (359)
T ss_pred HHHHHHHHhhcCCCCCcEEEeCcccc
Confidence 444444322 3345555655443
|
|
| >PTZ00079 NADP-specific glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.062 Score=64.88 Aligned_cols=144 Identities=17% Similarity=0.215 Sum_probs=94.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCC----------HHHHHHHHH----------Hc----CCeeEEE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLL----------KEDIDKVTN----------EF----GRVEATL 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~----------~ekAe~La~----------~~----~~v~~v~ 616 (1201)
+.+.++|+|=|.|.||+.+++.|.+.+ .+ |+|.|.+ .+++..+.+ .+ ++++++
T Consensus 234 ~l~Gk~VaVqG~GnVg~~aa~~L~e~G-akVVavSD~~G~iy~~~Gld~~~l~~l~~~k~~~~g~i~~~~~~~~~a~~~- 311 (454)
T PTZ00079 234 SLEGKTVVVSGSGNVAQYAVEKLLQLG-AKVLTMSDSDGYIHEPNGFTKEKLAYLMDLKNVKRGRLKEYAKHSSTAKYV- 311 (454)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEEcCCCcEECCCCCCHHHHHHHHHHHhhcCCcHHhhhhccCCcEEe-
Confidence 456799999999999999999999874 55 5588877 666533321 11 122221
Q ss_pred eecCCCCchHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEeccccCc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEVGLDP 692 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~GlDP 692 (1201)
.. +.+-. -+||+.+=|. ....+..-++..++.|+.+|... ..+++ -++..+++||.+++
T Consensus 312 ---~~---~~~~~--~~cDI~iPcA~~n~I~~~~a~~l~~~~ak~V~EgAN~p~t~e---A~~~L~~~GI~~~P------ 374 (454)
T PTZ00079 312 ---PG---KKPWE--VPCDIAFPCATQNEINLEDAKLLIKNGCKLVAEGANMPTTIE---ATHLFKKNGVIFCP------ 374 (454)
T ss_pred ---CC---cCccc--CCccEEEeccccccCCHHHHHHHHHcCCeEEEecCCCCCCHH---HHHHHHHCCcEEEC------
Confidence 11 12222 2799999886 67788899998889999999985 34443 33446789999987
Q ss_pred hhHHHHHHHHHHHhhhcCCcEEEEEeecCCCCCCCCCCCccccccccChHHHHH
Q psy12817 693 GIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLL 746 (1201)
Q Consensus 693 GIdhmlA~~~idei~~~ggkV~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~ 746 (1201)
|-+-..||-+.|..-|... .- .++|+.+.|-.
T Consensus 375 -----------D~~aNAGGV~vS~~E~~Qn---------~~--~~~W~~eeV~~ 406 (454)
T PTZ00079 375 -----------GKAANAGGVAISGLEMSQN---------AA--RLQWTAEEVDE 406 (454)
T ss_pred -----------hhhhcCCCeeeehHHhhhh---------hc--ccCCCHHHHHH
Confidence 2334456666654444432 22 37898876543
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.019 Score=61.88 Aligned_cols=75 Identities=21% Similarity=0.311 Sum_probs=57.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.++|+|.| +|++|+.+++.|++. +.+|++++|+ .++.+.+...+ ..+..+..|++| .+.+.++++
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 82 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAA-GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD--PDALPELVAACVAA 82 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 47899999 699999999999986 5788888885 44444444322 146778899998 777777665
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 4699999975
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.026 Score=61.28 Aligned_cols=76 Identities=20% Similarity=0.275 Sum_probs=56.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.++|+|.| +|++|+.+++.|++. +.+|++.+|+.+ +.+.+...+ .++..+.+|++| .+.+.++++
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREEF 82 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 47899999 699999999999986 578888888753 344443322 246778899998 777776654
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 83 ~~~d~vi~~ag~ 94 (248)
T PRK07806 83 GGLDALVLNASG 94 (248)
T ss_pred CCCcEEEECCCC
Confidence 57999988753
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.029 Score=67.16 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=61.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++|+|+|.| +|.+|+.+++.|++. +.+|++++|+.++++...... .++..+..|+.| .+.+.+.+.+.|++|++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~-G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ-GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--EAALAELLEKVDILIIN 252 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--HHHHHHHhCCCCEEEEC
Confidence 3468999999 699999999999886 578998999887665433221 235678899998 88888888999999998
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 253 AGi 255 (406)
T PRK07424 253 HGI 255 (406)
T ss_pred CCc
Confidence 753
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.031 Score=60.96 Aligned_cols=78 Identities=15% Similarity=0.280 Sum_probs=61.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|..+++.|.+. +.+|.+++|+.++++++.+.. .++..+.+|+.| .+.++++++
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 82 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQ-GAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRER 82 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3457899999 799999999999987 468999999988877766543 235678899988 677665554
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 83 ~~~id~li~~ag~ 95 (252)
T PRK07035 83 HGRLDILVNNAAA 95 (252)
T ss_pred cCCCCEEEECCCc
Confidence 47999999753
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.024 Score=61.55 Aligned_cols=75 Identities=15% Similarity=0.177 Sum_probs=56.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
|++|+|.| +|.+|..+++.|++. +.+|.+. .|+.++++.+.... .++..+.+|+.| .+++.++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAAR-GWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN--EADVIAMFDAVQSAF 78 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCC--HHHHHHHHHHHHHhc
Confidence 67999999 699999999999987 4676654 57777665554332 257788999998 666665543
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 79 ~~id~li~~ag 89 (248)
T PRK06947 79 GRLDALVNNAG 89 (248)
T ss_pred CCCCEEEECCc
Confidence 5799999985
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.022 Score=63.66 Aligned_cols=73 Identities=23% Similarity=0.400 Sum_probs=59.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCC-cEEEEcCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSA-DLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~-DVVIs~lP~ 643 (1201)
++|+|.| +|++|+.+++.|.+. +++|.+.+|......... .++..+..|+.| .+...+.++.+ |+||.+...
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~---~~~~~~~~d~~~--~~~~~~~~~~~~d~vih~aa~ 74 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAA-GHDVRGLDRLRDGLDPLL---SGVEFVVLDLTD--RDLVDELAKGVPDAVIHLAAQ 74 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhC-CCeEEEEeCCCccccccc---cccceeeecccc--hHHHHHHHhcCCCEEEEcccc
Confidence 3599999 699999999999987 789999999877665443 357788888887 66777777788 999999854
Q ss_pred c
Q psy12817 644 N 644 (1201)
Q Consensus 644 ~ 644 (1201)
.
T Consensus 75 ~ 75 (314)
T COG0451 75 S 75 (314)
T ss_pred C
Confidence 3
|
|
| >PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.023 Score=65.40 Aligned_cols=82 Identities=13% Similarity=0.225 Sum_probs=56.3
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEE-------EeecCCCCchHHHhhc-cCCcEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEAT-------LIDVNNGGSDNLSGLV-RSADLV 637 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v-------~lDV~D~~~e~L~elI-~~~DVV 637 (1201)
|||.|||+|.+|..++..|.+. +.+|++.+|+.+.++.+.....+.... .+.+. ..+.+.+ .++|+|
T Consensus 1 MkI~IiGaGa~G~ala~~L~~~-g~~V~l~~r~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~~~~Dli 75 (326)
T PRK14620 1 MKISILGAGSFGTAIAIALSSK-KISVNLWGRNHTTFESINTKRKNLKYLPTCHLPDNISVK----SAIDEVLSDNATCI 75 (326)
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHHcCCCcccCCCCcCCCCeEEe----CCHHHHHhCCCCEE
Confidence 4799999999999999999986 578999999998888776532111100 00111 2344444 478999
Q ss_pred EEcCCCcccHHHHHH
Q psy12817 638 VSLLPYNLHHHVAEF 652 (1201)
Q Consensus 638 Is~lP~~~h~~Vaka 652 (1201)
|.++|......+++.
T Consensus 76 iiavks~~~~~~l~~ 90 (326)
T PRK14620 76 ILAVPTQQLRTICQQ 90 (326)
T ss_pred EEEeCHHHHHHHHHH
Confidence 999997655554443
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.036 Score=66.58 Aligned_cols=129 Identities=16% Similarity=0.213 Sum_probs=80.5
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+...+|+|+|+|.+|+.++..+...|+. .+.+++....+...+....|+... .+ .
T Consensus 180 ~~~~~vlViGaG~iG~~~a~~L~~~G~~---------------~V~v~~r~~~ra~~la~~~g~~~~---------~~-~ 234 (423)
T PRK00045 180 LSGKKVLVIGAGEMGELVAKHLAEKGVR---------------KITVANRTLERAEELAEEFGGEAI---------PL-D 234 (423)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHCCCC---------------eEEEEeCCHHHHHHHHHHcCCcEe---------eH-H
Confidence 4568999999999999999999888843 456666665554445444443111 11 1
Q ss_pred hhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCC
Q psy12817 273 LFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTI 352 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTi 352 (1201)
.. .+.+..+|+||+|.. ... .+++.++++..++.. .|+-.+|+|++.- -.+
T Consensus 235 ~~-~~~l~~aDvVI~aT~--s~~-~~i~~~~l~~~~~~~--------------~~~~~vviDla~P-----------rdi 285 (423)
T PRK00045 235 EL-PEALAEADIVISSTG--APH-PIIGKGMVERALKAR--------------RHRPLLLVDLAVP-----------RDI 285 (423)
T ss_pred HH-HHHhccCCEEEECCC--CCC-cEEcHHHHHHHHhhc--------------cCCCeEEEEeCCC-----------CCC
Confidence 11 234668999999963 222 468999998844221 0122899999631 122
Q ss_pred CCCeeeccCCCCccccccccCCeEEEeeCCcCCCch
Q psy12817 353 DTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLP 388 (1201)
Q Consensus 353 d~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP 388 (1201)
|..+ ..-+||..|.+|+|-....
T Consensus 286 d~~v-------------~~l~~v~l~~vDdl~~~~~ 308 (423)
T PRK00045 286 EPEV-------------GELPGVYLYDVDDLQEIVE 308 (423)
T ss_pred cccc-------------cccCCeEEEEHHHHHHHHH
Confidence 2222 2346888899998866554
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.029 Score=67.23 Aligned_cols=91 Identities=20% Similarity=0.316 Sum_probs=66.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHcC--CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-EDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
+.++|+|+|+|.+|..+++.|++. +++|++.|++. +.+++...++. +++....|..+ +...++|+||.+
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~-G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------~~~~~~d~vv~~ 75 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKL-GAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-------EFLEGVDLVVVS 75 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-------hHhhcCCEEEEC
Confidence 458999999999999999999987 57999999975 33333222221 45555555432 345679999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD 662 (1201)
.......+.+.+|-+.|+.++.
T Consensus 76 ~g~~~~~~~~~~a~~~~i~~~~ 97 (450)
T PRK14106 76 PGVPLDSPPVVQAHKKGIEVIG 97 (450)
T ss_pred CCCCCCCHHHHHHHHCCCcEEe
Confidence 8655666688888888888875
|
|
| >PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.024 Score=69.64 Aligned_cols=100 Identities=18% Similarity=0.188 Sum_probs=63.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----------CCeeE-------EEeecCCCCchH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----------GRVEA-------TLIDVNNGGSDN 626 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----------~~v~~-------v~lDV~D~~~e~ 626 (1201)
..++|.|||+|.||..++..|+.. +++|++.|++.+.+++..+.. ...+. -.+...+ +
T Consensus 6 ~i~~V~VIGaG~MG~gIA~~la~a-G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~----~ 80 (507)
T PRK08268 6 SIATVAVIGAGAMGAGIAQVAAQA-GHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVE----A 80 (507)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeC----C
Confidence 347899999999999999999876 689999999999887632111 11000 0011111 2
Q ss_pred HHhhccCCcEEEEcCCCcccH--HH---HHHHHHcCCeEE-EccCChHH
Q psy12817 627 LSGLVRSADLVVSLLPYNLHH--HV---AEFCIQHGKNLV-TASYLSPE 669 (1201)
Q Consensus 627 L~elI~~~DVVIs~lP~~~h~--~V---akacIeaGkh~V-D~Syvs~e 669 (1201)
+.+ ++++|+||.|+|..... .+ +......++.+. ++|.++..
T Consensus 81 ~~~-~~~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl~i~ 128 (507)
T PRK08268 81 LAD-LADCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLSIT 128 (507)
T ss_pred HHH-hCCCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 333 56999999999976542 22 222233445553 56776654
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.0084 Score=63.86 Aligned_cols=74 Identities=27% Similarity=0.473 Sum_probs=48.0
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----------CCee-------EEEeecCCCCchHHHh
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----------GRVE-------ATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----------~~v~-------~v~lDV~D~~~e~L~e 629 (1201)
||.|+|+|.||+.++..++.. +++|+++|++.+.+++..+.. .... .-.+.+ .+++++
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~-G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~----~~dl~~ 75 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARA-GYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF----TTDLEE 75 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHT-TSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE----ESSGGG
T ss_pred CEEEEcCCHHHHHHHHHHHhC-CCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc----ccCHHH
Confidence 799999999999999999987 799999999998765433221 0000 000111 124666
Q ss_pred hccCCcEEEEcCCCccc
Q psy12817 630 LVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 630 lI~~~DVVIs~lP~~~h 646 (1201)
+. ++|+||.|+|-.+.
T Consensus 76 ~~-~adlViEai~E~l~ 91 (180)
T PF02737_consen 76 AV-DADLVIEAIPEDLE 91 (180)
T ss_dssp GC-TESEEEE-S-SSHH
T ss_pred Hh-hhheehhhccccHH
Confidence 66 99999999986553
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.028 Score=63.88 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=35.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDK 604 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~ 604 (1201)
.++||.|||+|.||..++..|+.. +++|++.|++.+++++
T Consensus 3 ~~~~V~vIG~G~mG~~iA~~l~~~-G~~V~~~d~~~~~~~~ 42 (295)
T PLN02545 3 EIKKVGVVGAGQMGSGIAQLAAAA-GMDVWLLDSDPAALSR 42 (295)
T ss_pred CcCEEEEECCCHHHHHHHHHHHhc-CCeEEEEeCCHHHHHH
Confidence 357899999999999999999976 5899999999987754
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.02 Score=62.79 Aligned_cols=76 Identities=14% Similarity=0.298 Sum_probs=60.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
++++|+|.| +|.+|+.+++.|++. +.+|++++|+.+..+.+.... .++..+.+|++| .+++.++++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~-G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 468999999 799999999999986 578889999988877665443 245678899998 777766554
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 87 ~~~d~li~~ag 97 (255)
T PRK06113 87 GKVDILVNNAG 97 (255)
T ss_pred CCCCEEEECCC
Confidence 4699999975
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.024 Score=60.97 Aligned_cols=76 Identities=18% Similarity=0.305 Sum_probs=58.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC---CcEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS---ADLVV 638 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~---~DVVI 638 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++..+ +.++++++.... ++..+.+|++| .+.+.+++++ .|+||
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~-~~~~~~~D~~~--~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTD-GANVRFTYAGSKDAAERLAQET-GATAVQTDSAD--RDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCCHHHHHHHHHHh-CCeEEecCCCC--HHHHHHHHHHhCCCcEEE
Confidence 458999999 699999999999986 467766654 667777776655 46778899988 6777776653 79999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 99753
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.041 Score=66.48 Aligned_cols=71 Identities=20% Similarity=0.253 Sum_probs=48.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHHc--CCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNEF--GRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~~--~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+.|||+|.| +|++|+.+++.|.++ +.+|++.++.... .+.+...+ ++++.+..|+.+ ..+.++|+||+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~-G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~-------~~l~~~D~ViH 189 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMAR-GDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVE-------PILLEVDQIYH 189 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHC-cCEEEEEeCCCccchhhhhhhccCCceEEEECCccC-------hhhcCCCEEEE
Confidence 458999999 799999999999987 5788888765321 12221111 345666666654 23457999999
Q ss_pred cCC
Q psy12817 640 LLP 642 (1201)
Q Consensus 640 ~lP 642 (1201)
|..
T Consensus 190 lAa 192 (442)
T PLN02206 190 LAC 192 (442)
T ss_pred eee
Confidence 984
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.0076 Score=69.15 Aligned_cols=72 Identities=21% Similarity=0.234 Sum_probs=52.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCCee-----EEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGRVE-----ATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~v~-----~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+||+|||+|.+|+.++..|+..+-. +|+++|++.++++.++..+.... ...+-..+ .+ .++++|+||+
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~-----~~-~l~~aDIVIi 74 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGD-----YS-DCKDADIVVI 74 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCC-----HH-HhCCCCEEEE
Confidence 4899999999999999999887543 79999999999888776541111 01111122 22 3579999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+++.
T Consensus 75 tag~ 78 (306)
T cd05291 75 TAGA 78 (306)
T ss_pred ccCC
Confidence 9954
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.019 Score=67.27 Aligned_cols=91 Identities=16% Similarity=0.277 Sum_probs=62.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCe---EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIH---ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~---VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.+||.|+| +|++|+.+++.|.++++++ +.++......-+.+ .+.+-.....+. | ++ + ++++|+|+.|
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~--~~~~~~l~v~~~-~--~~---~-~~~~Divf~a 75 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV--QFKGREIIIQEA-K--IN---S-FEGVDIAFFS 75 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe--eeCCcceEEEeC-C--HH---H-hcCCCEEEEC
Confidence 47999999 6999999999999877777 44433322222222 121212111122 2 22 2 3689999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|.....+++..+.++|+.+||.|
T Consensus 76 ~~~~~s~~~~~~~~~~G~~VID~S 99 (347)
T PRK06728 76 AGGEVSRQFVNQAVSSGAIVIDNT 99 (347)
T ss_pred CChHHHHHHHHHHHHCCCEEEECc
Confidence 999988999999999999999986
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.019 Score=62.87 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=56.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC-------Cc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS-------AD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~-------~D 635 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++. ....++..+.+|+.| .+++.+++++ .|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~-g~~v~~~~r~~~~~----~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 77 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAA-GATVVVCGRRAPET----VDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLD 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCChhhh----hcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 458999999 699999999999986 57899999987651 111257788999998 7777776653 59
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
+||++..
T Consensus 78 ~vi~~ag 84 (252)
T PRK07856 78 VLVNNAG 84 (252)
T ss_pred EEEECCC
Confidence 9999975
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.023 Score=61.78 Aligned_cols=75 Identities=21% Similarity=0.348 Sum_probs=59.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
|+++|.| +|.+|..+++.|++. +.+|++.+|+.++++++.... .++..+.+|++| .+.+.++++ .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD-GFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCC
Confidence 5789999 799999999999986 578999999987776655432 246778899998 777776654 4
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++.+.
T Consensus 78 id~vi~~ag~ 87 (254)
T TIGR02415 78 FDVMVNNAGV 87 (254)
T ss_pred CCEEEECCCc
Confidence 6999999864
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.035 Score=66.99 Aligned_cols=71 Identities=17% Similarity=0.192 Sum_probs=48.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHH--cCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNE--FGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~--~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+.|||+|.| +|++|+.+++.|.++ +++|++.+|.... .+.+... .++++.+..|+.+ ..+.++|+||+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~-G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~-------~~~~~~D~ViH 190 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGR-GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVE-------PILLEVDQIYH 190 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCccHhHhhhhccCCceEEEECcccc-------ccccCCCEEEE
Confidence 357999999 799999999999987 5789988875321 1111111 1345666556554 23568999999
Q ss_pred cCC
Q psy12817 640 LLP 642 (1201)
Q Consensus 640 ~lP 642 (1201)
|..
T Consensus 191 lAa 193 (436)
T PLN02166 191 LAC 193 (436)
T ss_pred Cce
Confidence 983
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.026 Score=60.97 Aligned_cols=77 Identities=16% Similarity=0.295 Sum_probs=59.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.++++|.| +|.+|+.+++.|.++ +.+|++++|+.++.+.+.+.. .++..+.+|+.| .+.+.++++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQK-GAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF 80 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 357899999 599999999999887 468999999988776655433 246678899988 667665554
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~~id~vi~~ag~ 92 (253)
T PRK08217 81 GQLNGLINNAGI 92 (253)
T ss_pred CCCCEEEECCCc
Confidence 36999998753
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.015 Score=66.77 Aligned_cols=77 Identities=17% Similarity=0.201 Sum_probs=58.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-----HHHHHHHH----cCCeeEEEeecCCCCchHHHhhcc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-----DIDKVTNE----FGRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-----kAe~La~~----~~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
.++++|+|.| +|++|+.+++.|.+. +++|++.+|+.+ +++.+... -.++..+..|+.| .+.+.++++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~ 80 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSK-GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSD--ASSLRRWLD 80 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEEecccccccccchhhhccccccccCceEEEEecCCC--HHHHHHHHH
Confidence 4568999999 699999999999987 578888887643 23333211 1246788899998 788888887
Q ss_pred C--CcEEEEcCC
Q psy12817 633 S--ADLVVSLLP 642 (1201)
Q Consensus 633 ~--~DVVIs~lP 642 (1201)
+ .|+||+|..
T Consensus 81 ~~~~d~Vih~A~ 92 (340)
T PLN02653 81 DIKPDEVYNLAA 92 (340)
T ss_pred HcCCCEEEECCc
Confidence 5 599999975
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.022 Score=66.38 Aligned_cols=67 Identities=15% Similarity=0.186 Sum_probs=51.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||+|.||+.+++.|... +.+|.+.||+.+..... .. . ...+.++++++|+|+.++|
T Consensus 144 l~g~~VgIIG~G~IG~~vA~~L~~~-G~~V~~~d~~~~~~~~~------~~-----~----~~~l~ell~~aDiVil~lP 207 (330)
T PRK12480 144 VKNMTVAIIGTGRIGAATAKIYAGF-GATITAYDAYPNKDLDF------LT-----Y----KDSVKEAIKDADIISLHVP 207 (330)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCChhHhhhh------hh-----c----cCCHHHHHhcCCEEEEeCC
Confidence 3457999999999999999999875 57999999987643211 11 1 1257888999999999999
Q ss_pred Ccc
Q psy12817 643 YNL 645 (1201)
Q Consensus 643 ~~~ 645 (1201)
..-
T Consensus 208 ~t~ 210 (330)
T PRK12480 208 ANK 210 (330)
T ss_pred CcH
Confidence 653
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.029 Score=61.38 Aligned_cols=76 Identities=16% Similarity=0.118 Sum_probs=59.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH----cCCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE----FGRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~----~~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++++|.| +|.+|+.+++.|++. +.+|++.+|+.++. ++.+. ..++.++.+|+++ .+.+.++++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 80 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEE-GAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAK 80 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHc-CCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence 3457999999 699999999999987 46788889988765 33222 2357789999998 777877665
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 81 ~~~id~vi~~ag 92 (258)
T PRK08628 81 FGRIDGLVNNAG 92 (258)
T ss_pred cCCCCEEEECCc
Confidence 4799999985
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.025 Score=61.11 Aligned_cols=74 Identities=7% Similarity=0.045 Sum_probs=56.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~DV 636 (1201)
+|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++..+..... ++.++.+|+.| .+++.++++ ..|+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 77 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ-GQPVIVSYRTHYPAIDGLRQA-GAQCIQADFST--NAGIMAFIDELKQHTDGLRA 77 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHc-CCEEEEcCCCC--HHHHHHHHHHHHhhCCCccE
Confidence 46899999 689999999999986 578999999876543322232 46788899998 677665543 3799
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
+|++..
T Consensus 78 lv~~ag 83 (236)
T PRK06483 78 IIHNAS 83 (236)
T ss_pred EEECCc
Confidence 999975
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.033 Score=63.04 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=54.0
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEE------eecCCCCchHHHhhccCCcEEEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATL------IDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~------lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
|||+|+|+|.+|..++..|++. +.+|++++| .++.+.+.+. +..... ....- ..+..+..+.+|+||.
T Consensus 1 mkI~IiG~G~iG~~~a~~L~~~-g~~V~~~~r-~~~~~~~~~~--g~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~vil 74 (305)
T PRK12921 1 MRIAVVGAGAVGGTFGGRLLEA-GRDVTFLVR-PKRAKALRER--GLVIRSDHGDAVVPGPV--ITDPEELTGPFDLVIL 74 (305)
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCceEEEec-HHHHHHHHhC--CeEEEeCCCeEEeccee--ecCHHHccCCCCEEEE
Confidence 5899999999999999999986 578999999 7777776542 222111 00000 1123444578999999
Q ss_pred cCCCcccHHHHH
Q psy12817 640 LLPYNLHHHVAE 651 (1201)
Q Consensus 640 ~lP~~~h~~Vak 651 (1201)
|+|......+++
T Consensus 75 avk~~~~~~~~~ 86 (305)
T PRK12921 75 AVKAYQLDAAIP 86 (305)
T ss_pred EecccCHHHHHH
Confidence 998765444443
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.083 Score=61.28 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=49.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeE-----EEeecCCCCchHHHhhccCCcEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEA-----TLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~-----v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
+.+||.|+|+|.||..++..++..+-.++.+.|++.++++..+........ ..+-.+ .+++ .++++|+||
T Consensus 4 ~~~KI~IIGaG~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~----~d~~-~l~~ADiVV 78 (319)
T PTZ00117 4 KRKKISMIGAGQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGT----NNYE-DIKDSDVVV 78 (319)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeC----CCHH-HhCCCCEEE
Confidence 467999999999999999988876535799999988765433322211110 111111 2355 568999999
Q ss_pred EcC
Q psy12817 639 SLL 641 (1201)
Q Consensus 639 s~l 641 (1201)
.+.
T Consensus 79 ita 81 (319)
T PTZ00117 79 ITA 81 (319)
T ss_pred ECC
Confidence 998
|
|
| >PRK05678 succinyl-CoA synthetase subunit alpha; Validated | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.038 Score=63.41 Aligned_cols=110 Identities=13% Similarity=0.090 Sum_probs=77.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC--HHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL--KEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVV 638 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~--~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVI 638 (1201)
++.||+|.| .|.+|+.+.+.|.+.+.-.+.-+++. .++ ..+++. ...+.++-.. .|++|
T Consensus 7 ~~~~~~v~~~~~~~g~~~l~~l~~~g~~~v~pVnp~~~~~~-------v~G~~~---------y~sv~dlp~~~~~DlAv 70 (291)
T PRK05678 7 KDTKVIVQGITGKQGTFHTEQMLAYGTNIVGGVTPGKGGTT-------VLGLPV---------FNTVAEAVEATGANASV 70 (291)
T ss_pred CCCeEEEeCCCchHHHHHHHHHHHCCCCEEEEECCCCCCCe-------EeCeec---------cCCHHHHhhccCCCEEE
Confidence 357999999 79999999999987643344455554 221 112322 2245555555 89999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEc--c-CChHHHHHHHHHHHHcCCEEE--eccc
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTA--S-YLSPEMMALHERAASAGITVL--NEVG 689 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~--S-yvs~e~~eLde~AkeAGVtil--~e~G 689 (1201)
.++|...-+++++.|.+.|+..+-+ + +-.++.++|.+.|++.|+.++ |.+|
T Consensus 71 i~vp~~~v~~~l~e~~~~gvk~avI~s~Gf~~~~~~~l~~~a~~~girvlGPNc~G 126 (291)
T PRK05678 71 IYVPPPFAADAILEAIDAGIDLIVCITEGIPVLDMLEVKAYLERKKTRLIGPNCPG 126 (291)
T ss_pred EEcCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEECCCCCc
Confidence 9999998899999999999875332 2 433345689899999999998 4455
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.028 Score=61.05 Aligned_cols=75 Identities=16% Similarity=0.300 Sum_probs=58.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhccC--------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVRS-------- 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~~-------- 633 (1201)
.++|+|.| +|.+|+.+++.|++. +.+|.+. .|+.++++.+....+ ++..+.+|+.| .+.+.+++++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFARE-GARVVVNYHQSEDAAEALADELGDRAIALQADVTD--REQVQAMFATATEHFGKP 81 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHHhCCC
Confidence 47899999 799999999999886 4677664 556777777666543 46778899998 7777776653
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
.|+||++..
T Consensus 82 id~li~~ag 90 (253)
T PRK08642 82 ITTVVNNAL 90 (253)
T ss_pred CeEEEECCC
Confidence 899999874
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.033 Score=65.80 Aligned_cols=119 Identities=12% Similarity=0.135 Sum_probs=83.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-C----C--------eeEEEeecCCCCchHHHhhcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-G----R--------VEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~----~--------v~~v~lDV~D~~~e~L~elI~ 632 (1201)
|||.|+|+|+||...+-.|++. +++|+.+|.++++.+.+.+.. | + ...-.+..+ .+.++.++
T Consensus 1 MkI~viGtGYVGLv~g~~lA~~-GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fT----td~~~a~~ 75 (414)
T COG1004 1 MKITVIGTGYVGLVTGACLAEL-GHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFT----TDYEEAVK 75 (414)
T ss_pred CceEEECCchHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEE----cCHHHHHh
Confidence 7999999999999999999987 478999999999999887643 1 1 111112233 25677888
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
++|+++.|+|.... .....|++|+...++++.+.-++. .++++-.-+-||...-+-.
T Consensus 76 ~adv~fIavgTP~~----------~dg~aDl~~V~ava~~i~~~~~~~-~vvV~KSTVPvGt~~~v~~ 132 (414)
T COG1004 76 DADVVFIAVGTPPD----------EDGSADLSYVEAVAKDIGEILDGK-AVVVIKSTVPVGTTEEVRA 132 (414)
T ss_pred cCCEEEEEcCCCCC----------CCCCccHHHHHHHHHHHHhhcCCC-eEEEEcCCCCCCchHHHHH
Confidence 99999999976542 135678888777777765544333 5666667777776654433
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.021 Score=66.83 Aligned_cols=92 Identities=14% Similarity=0.178 Sum_probs=61.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..+||+|+| +|++|+.+++.|.+ .+..++.........-+.+.. .+......++ + . +.++++|+|+.|
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~--~~~~~~v~~~-~--~----~~~~~~D~vf~a 76 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF--EGRDYTVEEL-T--E----DSFDGVDIALFS 76 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee--cCceeEEEeC-C--H----HHHcCCCEEEEC
Confidence 357999999 79999999999987 555665433222111111111 1222222222 1 1 223689999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|.....+++..+.++|+.+||.|
T Consensus 77 ~p~~~s~~~~~~~~~~g~~VIDlS 100 (344)
T PLN02383 77 AGGSISKKFGPIAVDKGAVVVDNS 100 (344)
T ss_pred CCcHHHHHHHHHHHhCCCEEEECC
Confidence 999888889998899999999997
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.057 Score=68.53 Aligned_cols=77 Identities=22% Similarity=0.322 Sum_probs=63.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhcc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
..++|+|.| +|.+|+.+++.|.+. +.+|++++|+.++++.+...+. ++..+.+|++| .+.+.++++
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~-Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAE-GACVVLADLDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFG 497 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 458999999 699999999999987 5689999999988877766542 57788999998 777776664
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 498 ~iDvvI~~AG~ 508 (681)
T PRK08324 498 GVDIVVSNAGI 508 (681)
T ss_pred CCCEEEECCCC
Confidence 57999999853
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.038 Score=65.72 Aligned_cols=70 Identities=26% Similarity=0.332 Sum_probs=51.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.||+.+++.|... +.+|.++||+....+. .... ++.. .++++++++++|+|+.++|
T Consensus 197 L~gktVGIVG~G~IG~~vA~~L~af-G~~V~~~d~~~~~~~~-~~~~-g~~~---------~~~l~ell~~sDvV~l~lP 264 (386)
T PLN03139 197 LEGKTVGTVGAGRIGRLLLQRLKPF-NCNLLYHDRLKMDPEL-EKET-GAKF---------EEDLDAMLPKCDVVVINTP 264 (386)
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHC-CCEEEEECCCCcchhh-Hhhc-Ccee---------cCCHHHHHhhCCEEEEeCC
Confidence 4578999999999999999999875 6789999987533222 1222 2221 2358888999999999999
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 265 lt 266 (386)
T PLN03139 265 LT 266 (386)
T ss_pred CC
Confidence 53
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.035 Score=60.72 Aligned_cols=76 Identities=11% Similarity=0.144 Sum_probs=58.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.++|+|.| +|.+|+.+++.|.+.+ .+ |++.+|+.++.+.+...+ .++..+.+|+.| .+.+.++++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G-~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERG-AAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA 81 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 458899999 6999999999999874 55 999999987766544332 235668899998 777776654
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 82 ~g~id~li~~ag 93 (260)
T PRK06198 82 FGRLDALVNAAG 93 (260)
T ss_pred hCCCCEEEECCC
Confidence 4799999975
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.019 Score=67.66 Aligned_cols=92 Identities=18% Similarity=0.236 Sum_probs=63.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCe---EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIH---ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~---VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
|++|+|+| +|++|+.+++.|++++++. +..++.. ...++. -.+.+-.....++.+ .+. ++++|+|+.|
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~-~sg~~~-~~f~g~~~~v~~~~~--~~~----~~~~Divf~a 72 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS-QAGGAA-PSFGGKEGTLQDAFD--IDA----LKKLDIIITC 72 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch-hhCCcc-cccCCCcceEEecCC--hhH----hcCCCEEEEC
Confidence 68999999 6999999999777766775 5554432 222222 122222223334333 222 3689999999
Q ss_pred CCCcccHHHHHHHHHcCCe--EEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKN--LVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh--~VD~S 664 (1201)
+|.....+++..+.++|+. +||.|
T Consensus 73 ~~~~~s~~~~~~~~~aG~~~~VID~S 98 (369)
T PRK06598 73 QGGDYTNEVYPKLRAAGWQGYWIDAA 98 (369)
T ss_pred CCHHHHHHHHHHHHhCCCCeEEEECC
Confidence 9998889999999999965 99986
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.042 Score=60.23 Aligned_cols=76 Identities=14% Similarity=0.176 Sum_probs=56.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.++++++|.| +|++|+.+++.|+++ +.+|++.+|+.. .+++.+.+ .++..+.+|++| .+++.++++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~-G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAE-GARVVLVDRSEL-VHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEA 81 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHH
Confidence 3468999999 699999999999987 578999999853 33333322 246678899998 777666554
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 82 ~~~id~lv~nAg 93 (260)
T PRK12823 82 FGRIDVLINNVG 93 (260)
T ss_pred cCCCeEEEECCc
Confidence 4799999874
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.026 Score=61.61 Aligned_cols=79 Identities=15% Similarity=0.244 Sum_probs=64.3
Q ss_pred CCCeEEEEcC--chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--------C
Q psy12817 564 ESRNVLLLGA--GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--------S 633 (1201)
Q Consensus 564 ~mkKVLILGA--G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--------~ 633 (1201)
+.++|+|.|| |.||.++++.+++. ++.|....|..+....|+.++ ++.+..+|+++ ++++.+... +
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~-G~~V~AtaR~~e~M~~L~~~~-gl~~~kLDV~~--~~~V~~v~~evr~~~~Gk 81 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARN-GYLVYATARRLEPMAQLAIQF-GLKPYKLDVSK--PEEVVTVSGEVRANPDGK 81 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhC-CeEEEEEccccchHhhHHHhh-CCeeEEeccCC--hHHHHHHHHHHhhCCCCc
Confidence 4689999994 99999999999986 689999999999999999777 78999999998 677655432 3
Q ss_pred CcEEEEcCCCccc
Q psy12817 634 ADLVVSLLPYNLH 646 (1201)
Q Consensus 634 ~DVVIs~lP~~~h 646 (1201)
.|+.+|-...+..
T Consensus 82 ld~L~NNAG~~C~ 94 (289)
T KOG1209|consen 82 LDLLYNNAGQSCT 94 (289)
T ss_pred eEEEEcCCCCCcc
Confidence 6888887654443
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.034 Score=63.65 Aligned_cols=77 Identities=13% Similarity=0.187 Sum_probs=60.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC----CeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG----RVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~----~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+++.++|.| ++.+|..+++.|++.+..+|++++|+.+++++++..+. ++..+.+|++| .+.++++++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS--LDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 356889999 68999999999998753789999999988877766542 35677899998 777665543
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 80 ~~iD~lI~nAG 90 (314)
T TIGR01289 80 RPLDALVCNAA 90 (314)
T ss_pred CCCCEEEECCC
Confidence 4799999875
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.031 Score=67.78 Aligned_cols=84 Identities=18% Similarity=0.332 Sum_probs=59.5
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|+|+|.|.+|++....++.+| +.|.+++....+...... +| |...
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~G----------------a~ViV~e~dp~~a~~A~~-~G--~~~~---------- 301 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFG----------------ARVVVTEIDPICALQAAM-EG--YQVV---------- 301 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCC----------------CEEEEEeCCchhHHHHHh-cC--ceec----------
Confidence 455689999999999999999999998 445666544333222111 22 2110
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
.+ ++.++.+|+||++. ..+.+|+.++++. ||||
T Consensus 302 -~l-eell~~ADIVI~at----Gt~~iI~~e~~~~-MKpG 334 (476)
T PTZ00075 302 -TL-EDVVETADIFVTAT----GNKDIITLEHMRR-MKNN 334 (476)
T ss_pred -cH-HHHHhcCCEEEECC----CcccccCHHHHhc-cCCC
Confidence 11 24577899999984 4678999999999 9999
|
|
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.02 Score=65.45 Aligned_cols=96 Identities=18% Similarity=0.175 Sum_probs=61.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHH----HHHHcCCeeEEEeec
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDK----VTNEFGRVEATLIDV 619 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~----La~~~~~v~~v~lDV 619 (1201)
.+..+|+|+|+|.+|..++++|+..+--+|+++|.+. .|++. +.+..|.++. ++
T Consensus 17 L~~s~VLIvG~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V---~~ 93 (286)
T cd01491 17 LQKSNVLISGLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPV---TV 93 (286)
T ss_pred HhcCcEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEE---EE
Confidence 4568999999999999999999988666799888543 23332 2222244432 22
Q ss_pred CCCCchHHHhhccCCcEEEEcCC-CcccHHHHHHHHHcCCeEEEc
Q psy12817 620 NNGGSDNLSGLVRSADLVVSLLP-YNLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 620 ~D~~~e~L~elI~~~DVVIs~lP-~~~h~~VakacIeaGkh~VD~ 663 (1201)
.+ .....+.+++.|+||.|.. ......+-+.|.++++.++..
T Consensus 94 ~~--~~~~~~~l~~fdvVV~~~~~~~~~~~in~~c~~~~ipfI~a 136 (286)
T cd01491 94 ST--GPLTTDELLKFQVVVLTDASLEDQLKINEFCHSPGIKFISA 136 (286)
T ss_pred Ee--ccCCHHHHhcCCEEEEecCCHHHHHHHHHHHHHcCCEEEEE
Confidence 22 1122356678899988863 222344666777777776664
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.038 Score=60.83 Aligned_cols=77 Identities=19% Similarity=0.359 Sum_probs=59.1
Q ss_pred CCCeEEEEcC-c-hhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH----cC--CeeEEEeecCCCCchHHHhhcc---
Q psy12817 564 ESRNVLLLGA-G-YVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE----FG--RVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 564 ~mkKVLILGA-G-~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~----~~--~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
+.++++|.|+ | .+|+.+++.|++. +.+|++.+|+.++.++..+. ++ ++..+.+|+.+ .+.++++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~ 92 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEE-GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDAAV 92 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHHHH
Confidence 4589999995 7 6999999999986 46899999998776655432 22 46678899998 777776654
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 93 ~~~g~id~li~~ag~ 107 (262)
T PRK07831 93 ERLGRLDVLVNNAGL 107 (262)
T ss_pred HHcCCCCEEEECCCC
Confidence 46999999853
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.057 Score=61.05 Aligned_cols=38 Identities=11% Similarity=0.248 Sum_probs=34.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDID 603 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe 603 (1201)
++||.|||+|.||..++..+++. +++|++.|+++++++
T Consensus 3 ~~kI~VIG~G~mG~~ia~~la~~-g~~V~~~d~~~~~~~ 40 (282)
T PRK05808 3 IQKIGVIGAGTMGNGIAQVCAVA-GYDVVMVDISDAAVD 40 (282)
T ss_pred ccEEEEEccCHHHHHHHHHHHHC-CCceEEEeCCHHHHH
Confidence 57899999999999999999887 578999999998875
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.023 Score=66.60 Aligned_cols=79 Identities=14% Similarity=0.111 Sum_probs=52.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
...++|+|+|+|.||+.+++.|... +.+|++++|+..+.......++ .+......... ...++++++++|+|+.+
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~af-G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPF-GVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGG--HEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhC-CCEEEEECCCCChhhhhhhccccccccccccccCc--ccCHHHHHhhCCEEEEC
Confidence 4568999999999999999999876 5799999997432211100000 01100000112 45789999999999999
Q ss_pred CCCc
Q psy12817 641 LPYN 644 (1201)
Q Consensus 641 lP~~ 644 (1201)
+|..
T Consensus 234 lPlt 237 (347)
T PLN02928 234 CTLT 237 (347)
T ss_pred CCCC
Confidence 9954
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.091 Score=60.88 Aligned_cols=76 Identities=18% Similarity=0.198 Sum_probs=52.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCCeeEE--EeecCCCCchHHHhhccCCcEEEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGRVEAT--LIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~v~~v--~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
...+||.|||+|.||..++..|+..+-. ++.+.|++.++++..+..+..+.+. ...+.. ...+ .++++|+||.
T Consensus 4 ~~~~ki~iiGaG~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~~-~~~~adivIi 79 (315)
T PRK00066 4 KQHNKVVLVGDGAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDYS-DCKDADLVVI 79 (315)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCHH-HhCCCCEEEE
Confidence 3457999999999999999999877544 6999999988877766554222110 112221 1233 3689999999
Q ss_pred cCC
Q psy12817 640 LLP 642 (1201)
Q Consensus 640 ~lP 642 (1201)
+..
T Consensus 80 tag 82 (315)
T PRK00066 80 TAG 82 (315)
T ss_pred ecC
Confidence 874
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.026 Score=64.34 Aligned_cols=74 Identities=19% Similarity=0.320 Sum_probs=58.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhC-CCCeEEEEeC-----CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRD-ENIHITLGSL-----LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADL 636 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~-~~~~VtVadR-----~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DV 636 (1201)
|++||-| ||+||+..++++.+. ++.+|++.|. +.+.+..+.. -|+..+++.|+.| .+.+.++++ +.|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-~~~~~fv~~DI~D--~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-SPRYRFVQGDICD--RELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-CCCceEEeccccC--HHHHHHHHHhcCCCe
Confidence 5899998 999999999999865 5567888875 3444444433 2578999999998 889999998 5899
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
|++...
T Consensus 78 VvhfAA 83 (340)
T COG1088 78 VVHFAA 83 (340)
T ss_pred EEEech
Confidence 999864
|
|
| >TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.085 Score=62.45 Aligned_cols=121 Identities=15% Similarity=0.228 Sum_probs=80.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCC-CCeEE--EEeCCHHHHHHHHHHcCCeeEEEe-ecCC------------------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDE-NIHIT--LGSLLKEDIDKVTNEFGRVEATLI-DVNN------------------ 621 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~-~~~Vt--VadR~~ekAe~La~~~~~v~~v~l-DV~D------------------ 621 (1201)
||||+|+| +|.||....+-+.+.+ .++|+ .+.++.+.+.+.+.+| +.+.+.+ |-.+
T Consensus 1 Mk~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~~n~~~L~~q~~~f-~p~~v~i~d~~~~~~l~~~l~~~~~~~~v~ 79 (389)
T TIGR00243 1 MKQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAGKNVALMVEQILEF-RPKFVAIDDEASLKDLKTMLQQQGSRTEVL 79 (389)
T ss_pred CceEEEEecChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHc-CCCEEEEcCHHHHHHHHHHhhcCCCCcEEE
Confidence 68999999 7999999999887654 36654 4567888888888777 2222222 1100
Q ss_pred CCchHHHhhcc--CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC--ChHHHHHHHHHHHHcCCEEEe
Q psy12817 622 GGSDNLSGLVR--SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY--LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 622 ~~~e~L~elI~--~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy--vs~e~~eLde~AkeAGVtil~ 686 (1201)
...+.+.+++. ++|+|++++-......-.-+|+++|+.+.-+.= ..-.-.-+.+.|++.|..+++
T Consensus 80 ~G~~~l~~l~~~~~~D~vv~AivG~aGL~pt~~Ai~~gk~iaLANKEsLV~aG~li~~~a~~~~~~I~P 148 (389)
T TIGR00243 80 VGEEGICEMAALEDVDQVMNAIVGAAGLLPTLAAIRAGKTIALANKESLVTAGHLFLDAVKKYGVQLLP 148 (389)
T ss_pred ECHHHHHHHHcCCCCCEEEEhhhcHhhHHHHHHHHHCCCcEEEechhHHHhhHHHHHHHHHHcCCeEEe
Confidence 00234444444 479999999776676777788999998766531 111223345668889999987
|
1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis. |
| >COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.023 Score=64.87 Aligned_cols=81 Identities=21% Similarity=0.227 Sum_probs=62.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
-.+.|+|+|||+|.-|.+.+..|..+ ++.|+|+-|.-....+.|.+- +.+ |. .++++++.+|+|++++
T Consensus 15 ~LkgK~iaIIGYGsQG~ahalNLRDS-GlnViiGlr~g~~s~~kA~~d-Gf~-----V~-----~v~ea~k~ADvim~L~ 82 (338)
T COG0059 15 LLKGKKVAIIGYGSQGHAQALNLRDS-GLNVIIGLRKGSSSWKKAKED-GFK-----VY-----TVEEAAKRADVVMILL 82 (338)
T ss_pred HhcCCeEEEEecChHHHHHHhhhhhc-CCcEEEEecCCchhHHHHHhc-CCE-----ee-----cHHHHhhcCCEEEEeC
Confidence 46689999999999999999998775 678888877666544444432 333 22 4778889999999999
Q ss_pred CCcccHHHHHHHH
Q psy12817 642 PYNLHHHVAEFCI 654 (1201)
Q Consensus 642 P~~~h~~VakacI 654 (1201)
|...|..+-+..|
T Consensus 83 PDe~q~~vy~~~I 95 (338)
T COG0059 83 PDEQQKEVYEKEI 95 (338)
T ss_pred chhhHHHHHHHHh
Confidence 9988888877554
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.03 Score=60.44 Aligned_cols=76 Identities=12% Similarity=0.145 Sum_probs=57.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITL-GSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS----- 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtV-adR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~----- 633 (1201)
|+.|+|.| +|.+|+.+++.|++. +.+|++ ..|+.++.+++.... .++..+.+|+.| .+.+++++++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~~ 77 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQE-GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD--ENQVVAMFTAIDQHD 77 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC--HHHHHHHHHHHHHhC
Confidence 57899999 699999999999976 567765 578877766554432 246778999998 7778776654
Q ss_pred --CcEEEEcCCC
Q psy12817 634 --ADLVVSLLPY 643 (1201)
Q Consensus 634 --~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 78 ~~id~vi~~ag~ 89 (247)
T PRK09730 78 EPLAALVNNAGI 89 (247)
T ss_pred CCCCEEEECCCC
Confidence 5899999754
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.034 Score=61.82 Aligned_cols=109 Identities=17% Similarity=0.259 Sum_probs=69.9
Q ss_pred cccccccccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHHc----
Q psy12817 553 KSRHKADIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNEF---- 609 (1201)
Q Consensus 553 ~~~s~~~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~~---- 609 (1201)
...+...++-.+..+|+|+|.|.||+.+++.|+|.+--++++.|.+. .+++.+++.+
T Consensus 18 ~l~G~~~lekl~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~In 97 (263)
T COG1179 18 RLYGEDGLEKLKQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQIN 97 (263)
T ss_pred HHcChhHHHHHhhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhC
Confidence 34444555566778999999999999999999998755677776431 1333344333
Q ss_pred CCeeEEEee-cCCCCchHHHhhcc-CCcEEEEcCCC-cccHHHHHHHHHcCCeEEEc
Q psy12817 610 GRVEATLID-VNNGGSDNLSGLVR-SADLVVSLLPY-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 610 ~~v~~v~lD-V~D~~~e~L~elI~-~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~ 663 (1201)
|.++....+ .-+ ++.+++++. +.|.||+|+-. ..-..++..|.+++.++++.
T Consensus 98 P~c~V~~~~~f~t--~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss 152 (263)
T COG1179 98 PECEVTAINDFIT--EENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISS 152 (263)
T ss_pred CCceEeehHhhhC--HhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEee
Confidence 444433322 222 567777776 48999998843 23355666666666666654
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.025 Score=61.40 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=54.5
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc----------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR---------- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~---------- 632 (1201)
|++|+|.| +|.+|+.+++.|++. +.+|++++|+.++.. .... .++..+.+|+.| .+++++++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~-G~~v~~~~r~~~~~~--~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~~ 75 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP-GIAVLGVARSRHPSL--AAAAGERLAEVELDLSD--AAAAAAWLAGDLLAAFVDG 75 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC-CCEEEEEecCcchhh--hhccCCeEEEEEeccCC--HHHHHHHHHHHHHHHhccC
Confidence 67999999 699999999999986 578888898865421 2222 247788999998 777776432
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 76 ~~~~~~v~~ag 86 (243)
T PRK07023 76 ASRVLLINNAG 86 (243)
T ss_pred CCceEEEEcCc
Confidence 3678888864
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.031 Score=68.02 Aligned_cols=77 Identities=14% Similarity=0.237 Sum_probs=62.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS----- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~----- 633 (1201)
..++++|+| +|.+|+.+++.|+++ +.+|++++|+.++++++++.. .++..+.+|++| .+.+.+++++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFARE-GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 457899999 699999999999986 578999999998887766543 246788999998 7787776653
Q ss_pred --CcEEEEcCCC
Q psy12817 634 --ADLVVSLLPY 643 (1201)
Q Consensus 634 --~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 7999999853
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.032 Score=60.71 Aligned_cols=73 Identities=11% Similarity=0.192 Sum_probs=56.4
Q ss_pred CCeEEEEcC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--------CCc
Q psy12817 565 SRNVLLLGA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--------SAD 635 (1201)
Q Consensus 565 mkKVLILGA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--------~~D 635 (1201)
+++|+|.|+ |.+|+.+++.|++. +.+|++++|+.++.+.+.+ . ++..+.+|+.| .+++.++++ ..|
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~-~-~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVARMNS-L-GFTGILLDLDD--PESVERAADEVIALTDNRLY 76 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHHHHh-C-CCeEEEeecCC--HHHHHHHHHHHHHhcCCCCe
Confidence 368999995 99999999999876 5789999999988776543 2 57788899988 666655442 357
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
.+|++..
T Consensus 77 ~ii~~ag 83 (256)
T PRK08017 77 GLFNNAG 83 (256)
T ss_pred EEEECCC
Confidence 7888764
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.04 Score=60.52 Aligned_cols=76 Identities=14% Similarity=0.258 Sum_probs=60.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc---CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR---SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~---~~ 634 (1201)
+.++++|.| +|.+|+.+++.|++. +.+|++++|+.++++++...+ .++..+.+|++| .+++.++++ ..
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAE-GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAEAGDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHhCCC
Confidence 358999999 589999999999986 569999999998877755432 236678899998 777776654 58
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|++|++..
T Consensus 83 d~lv~~ag 90 (259)
T PRK06125 83 DILVNNAG 90 (259)
T ss_pred CEEEECCC
Confidence 99999874
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.053 Score=62.58 Aligned_cols=77 Identities=19% Similarity=0.171 Sum_probs=51.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEE------------EeecCCCCchHHHhhc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEAT------------LIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v------------~lDV~D~~~e~L~elI 631 (1201)
.|+||+|||+|.||..++..|.+. +++|++++|+.. .+.+... +.... .+...+ .. +.+
T Consensus 1 ~~mkI~IiG~G~mG~~~A~~L~~~-G~~V~~~~r~~~-~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~----~~-~~~ 71 (341)
T PRK08229 1 MMARICVLGAGSIGCYLGGRLAAA-GADVTLIGRARI-GDELRAH--GLTLTDYRGRDVRVPPSAIAFST----DP-AAL 71 (341)
T ss_pred CCceEEEECCCHHHHHHHHHHHhc-CCcEEEEecHHH-HHHHHhc--CceeecCCCcceecccceeEecc----Ch-hhc
Confidence 368999999999999999999887 578999999753 3444331 22111 011122 22 346
Q ss_pred cCCcEEEEcCCCcccHHH
Q psy12817 632 RSADLVVSLLPYNLHHHV 649 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~h~~V 649 (1201)
+++|+||.|+|......+
T Consensus 72 ~~~D~vil~vk~~~~~~~ 89 (341)
T PRK08229 72 ATADLVLVTVKSAATADA 89 (341)
T ss_pred cCCCEEEEEecCcchHHH
Confidence 789999999986544333
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.028 Score=59.24 Aligned_cols=67 Identities=18% Similarity=0.234 Sum_probs=45.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
..|+++|+|+|.+|+.+|+.|... +.+|+|++.++-++-+.. ..+.+. ..++++++++|++|.++..
T Consensus 22 ~Gk~vvV~GYG~vG~g~A~~lr~~-Ga~V~V~e~DPi~alqA~--~dGf~v----------~~~~~a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 22 AGKRVVVIGYGKVGKGIARALRGL-GARVTVTEIDPIRALQAA--MDGFEV----------MTLEEALRDADIFVTATGN 88 (162)
T ss_dssp TTSEEEEE--SHHHHHHHHHHHHT-T-EEEEE-SSHHHHHHHH--HTT-EE----------E-HHHHTTT-SEEEE-SSS
T ss_pred CCCEEEEeCCCcccHHHHHHHhhC-CCEEEEEECChHHHHHhh--hcCcEe----------cCHHHHHhhCCEEEECCCC
Confidence 458999999999999999999887 589999999997653322 223332 2467788899999999864
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)) | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.037 Score=64.87 Aligned_cols=82 Identities=11% Similarity=0.201 Sum_probs=58.2
Q ss_pred eEEEEcCchhHHHHHHHHHhCC-------CCeEEEEeC-----CHHHHHHHHHHcCCeeEE---E----eecCCCCchHH
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDE-------NIHITLGSL-----LKEDIDKVTNEFGRVEAT---L----IDVNNGGSDNL 627 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~-------~~~VtVadR-----~~ekAe~La~~~~~v~~v---~----lDV~D~~~e~L 627 (1201)
||.|||+|..|.+++..|++++ +.+|++.+| +.+-.+.+...+.+.++. . +.++ .++
T Consensus 1 kI~VIGaG~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at----~dl 76 (342)
T TIGR03376 1 RVAVVGSGNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAV----PDL 76 (342)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEE----CCH
Confidence 6899999999999999998753 168999998 555555554433222211 0 1122 357
Q ss_pred HhhccCCcEEEEcCCCcccHHHHHH
Q psy12817 628 SGLVRSADLVVSLLPYNLHHHVAEF 652 (1201)
Q Consensus 628 ~elI~~~DVVIs~lP~~~h~~Vaka 652 (1201)
.++++++|+||.++|......+++.
T Consensus 77 ~eal~~ADiIIlAVPs~~i~~vl~~ 101 (342)
T TIGR03376 77 VEAAKGADILVFVIPHQFLEGICKQ 101 (342)
T ss_pred HHHHhcCCEEEEECChHHHHHHHHH
Confidence 8888999999999998877766654
|
Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria. |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.13 Score=60.01 Aligned_cols=97 Identities=13% Similarity=0.196 Sum_probs=67.3
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|.|+|.|+.|+.....++.+|+ .+.+|+....... + +. .+.
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~G~----------------~V~~~d~~~~~~~------~--~~---------~~~ 189 (330)
T PRK12480 143 PVKNMTVAIIGTGRIGAATAKIYAGFGA----------------TITAYDAYPNKDL------D--FL---------TYK 189 (330)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCC----------------EEEEEeCChhHhh------h--hh---------hcc
Confidence 3555689999999999999999999884 4566664322110 0 11 111
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCe
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSI 343 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsi 343 (1201)
..+ ++.++.+|+|+.+.-....+-.++..+.++. ||+| +++++++ .|+-+
T Consensus 190 ~~l-~ell~~aDiVil~lP~t~~t~~li~~~~l~~-mk~g------------------avlIN~a--RG~~v 239 (330)
T PRK12480 190 DSV-KEAIKDADIISLHVPANKESYHLFDKAMFDH-VKKG------------------AILVNAA--RGAVI 239 (330)
T ss_pred CCH-HHHHhcCCEEEEeCCCcHHHHHHHhHHHHhc-CCCC------------------cEEEEcC--Ccccc
Confidence 122 3467899999999977766667888888877 9999 8888876 44433
|
|
| >PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.056 Score=69.05 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=72.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.+||+|||+|.||..++..|.+.+ ..+|++.||+.++++...+ . ++. +.. ..++.+.++++|+||.|+|.
T Consensus 3 ~~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~-~-g~~----~~~---~~~~~~~~~~aDvVilavp~ 73 (735)
T PRK14806 3 FGRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVS-L-GVI----DRG---EEDLAEAVSGADVIVLAVPV 73 (735)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHH-C-CCC----Ccc---cCCHHHHhcCCCEEEECCCH
Confidence 378999999999999999998875 2579999999988766443 3 221 111 22456677899999999997
Q ss_pred cccHHHHHHH---HHcCCeEEEccCChH-HHHHHHHHHHHcCCEEE
Q psy12817 644 NLHHHVAEFC---IQHGKNLVTASYLSP-EMMALHERAASAGITVL 685 (1201)
Q Consensus 644 ~~h~~Vakac---IeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil 685 (1201)
..-..+++.. +..++-++|.+-+.. -++++.+......+.+|
T Consensus 74 ~~~~~vl~~l~~~~~~~~ii~d~~svk~~~~~~l~~~~~~~~~r~~ 119 (735)
T PRK14806 74 LAMEKVLADLKPLLSEHAIVTDVGSTKGNVVDAARAVFGELPAGFV 119 (735)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEcCCCchHHHHHHHHhccccCCeEE
Confidence 6545554433 344555666655432 33444433333344554
|
|
| >COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.053 Score=64.00 Aligned_cols=123 Identities=15% Similarity=0.240 Sum_probs=88.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHh--------------h
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSG--------------L 630 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~e--------------l 630 (1201)
..+|.|+|.|+||-+++-.+++. +++|+-+|.+..+.+++.+.- .. ..+... .+-+++ .
T Consensus 9 ~~~I~ViGLGYVGLPlA~~fA~~-G~~ViG~DIn~~~Vd~ln~G~--~~--i~e~~~--~~~v~~~v~~g~lraTtd~~~ 81 (436)
T COG0677 9 SATIGVIGLGYVGLPLAAAFASA-GFKVIGVDINQKKVDKLNRGE--SY--IEEPDL--DEVVKEAVESGKLRATTDPEE 81 (436)
T ss_pred ceEEEEEccccccHHHHHHHHHc-CCceEeEeCCHHHHHHHhCCc--ce--eecCcH--HHHHHHHHhcCCceEecChhh
Confidence 48999999999999999999986 588999999999999887532 11 122222 111222 2
Q ss_pred ccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHH
Q psy12817 631 VRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDA 705 (1201)
Q Consensus 631 I~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~ide 705 (1201)
+++||+.|.|+|..+.. -+--|+||+....+.+ ...-+.|-.++.|.-.-||-+.=++..+++.
T Consensus 82 l~~~dv~iI~VPTPl~~----------~~~pDls~v~~aa~sI-a~~L~kG~LVIlEST~~PGTTe~v~~plle~ 145 (436)
T COG0677 82 LKECDVFIICVPTPLKK----------YREPDLSYVESAARSI-APVLKKGDLVILESTTPPGTTEEVVKPLLEE 145 (436)
T ss_pred cccCCEEEEEecCCcCC----------CCCCChHHHHHHHHHH-HHhcCCCCEEEEecCCCCCcHHHHHHHHHhh
Confidence 34799999999987641 2445778876666666 4455788888899999999877666655543
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.045 Score=59.72 Aligned_cols=76 Identities=14% Similarity=0.260 Sum_probs=58.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc--CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF--GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~--~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
..++|+|.| +|.+|+.+++.|+++ +.+|++++|+.+..+. .... .++..+.+|+.+ .+++.++++ .
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~-G~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAK-GARVALLDRSEDVAEV-AAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHH-HHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCC
Confidence 457999999 699999999999986 5789999998765332 2222 235678899998 777776654 4
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 90 ~d~vi~~ag~ 99 (255)
T PRK06841 90 IDILVNSAGV 99 (255)
T ss_pred CCEEEECCCC
Confidence 6999999854
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.045 Score=60.01 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=57.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++.++ +.+.++++... ++.++.+|++| .+++.++++ ..
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~--~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLRE-GAKVAVLYNSAENEAKELREK--GVFTIKCDVGN--RDQVKKSKEVVEKEFGRV 80 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHhC--CCeEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 358999999 699999999999987 467776655 44555555432 57788999998 777777665 47
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 81 d~li~~ag~ 89 (255)
T PRK06463 81 DVLVNNAGI 89 (255)
T ss_pred CEEEECCCc
Confidence 999999754
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.058 Score=64.72 Aligned_cols=128 Identities=17% Similarity=0.216 Sum_probs=79.3
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+...+|+|+|+|.+|+.+...+...|+. .+.+++....+...+....|+... .+.
T Consensus 178 l~~~~VlViGaG~iG~~~a~~L~~~G~~---------------~V~v~~rs~~ra~~la~~~g~~~i---------~~~- 232 (417)
T TIGR01035 178 LKGKKALLIGAGEMGELVAKHLLRKGVG---------------KILIANRTYERAEDLAKELGGEAV---------KFE- 232 (417)
T ss_pred ccCCEEEEECChHHHHHHHHHHHHCCCC---------------EEEEEeCCHHHHHHHHHHcCCeEe---------eHH-
Confidence 4458999999999999999999888842 456776665554444443443110 011
Q ss_pred hhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCC
Q psy12817 273 LFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTI 352 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTi 352 (1201)
.. .+.+..+|+||+|.. ... .+++.++++..++... +-.+|+|++. -. .+
T Consensus 233 ~l-~~~l~~aDvVi~aT~--s~~-~ii~~e~l~~~~~~~~---------------~~~~viDla~--Pr---------di 282 (417)
T TIGR01035 233 DL-EEYLAEADIVISSTG--APH-PIVSKEDVERALRERT---------------RPLFIIDIAV--PR---------DV 282 (417)
T ss_pred HH-HHHHhhCCEEEECCC--CCC-ceEcHHHHHHHHhcCC---------------CCeEEEEeCC--CC---------CC
Confidence 11 234567999999953 233 4789999988433210 1178999962 11 22
Q ss_pred CCCeeeccCCCCccccccccCCeEEEeeCCcCCCch
Q psy12817 353 DTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLP 388 (1201)
Q Consensus 353 d~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP 388 (1201)
|..+ -.-+|+.+|.+|++-..+.
T Consensus 283 d~~v-------------~~l~~v~l~~vDdl~~~~~ 305 (417)
T TIGR01035 283 DPAV-------------ARLEGVFLYDVDDLQPVVE 305 (417)
T ss_pred Chhh-------------cCcCCeEEEEHHHHHHHHH
Confidence 2211 1236888999998866554
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.079 Score=60.63 Aligned_cols=72 Identities=19% Similarity=0.205 Sum_probs=48.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe-----eEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV-----EATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v-----~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
|+||.|+|+|.||..++..++..+-.+|+++|+++++++..+..+... ....+..+. .++ .++++|+||.
T Consensus 2 ~~KI~VIGaG~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~~-~~~~aDiVii 76 (307)
T PRK06223 2 RKKISIIGAGNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTN----DYE-DIAGSDVVVI 76 (307)
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCC----CHH-HHCCCCEEEE
Confidence 789999999999999999988764228999999888765544322110 001122211 233 4689999999
Q ss_pred cC
Q psy12817 640 LL 641 (1201)
Q Consensus 640 ~l 641 (1201)
+.
T Consensus 77 ~~ 78 (307)
T PRK06223 77 TA 78 (307)
T ss_pred CC
Confidence 97
|
|
| >PRK00676 hemA glutamyl-tRNA reductase; Validated | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.029 Score=65.47 Aligned_cols=88 Identities=14% Similarity=0.135 Sum_probs=55.7
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+...++|+|||+|.||+.++++|.+.+..+|+|++|+.+. ..+.+. .....++..++|+||+|+
T Consensus 171 ~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~-----~~~~~~-----------~~~~~~~~~~~DvVIs~t 234 (338)
T PRK00676 171 KSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLT-----LPYRTV-----------VREELSFQDPYDVIFFGS 234 (338)
T ss_pred CccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccc-----cchhhh-----------hhhhhhcccCCCEEEEcC
Confidence 3567999999999999999999999866679999999842 111000 001123446899999973
Q ss_pred --CCcccHHHHHHHHHc--CCeEEEccC
Q psy12817 642 --PYNLHHHVAEFCIQH--GKNLVTASY 665 (1201)
Q Consensus 642 --P~~~h~~VakacIea--Gkh~VD~Sy 665 (1201)
....|+.+.+.-++. +.-++|++.
T Consensus 235 ~~Tas~~p~i~~~~~~~~~~r~~iDLAv 262 (338)
T PRK00676 235 SESAYAFPHLSWESLADIPDRIVFDFNV 262 (338)
T ss_pred CcCCCCCceeeHHHHhhccCcEEEEecC
Confidence 122233222222221 136888863
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.037 Score=61.20 Aligned_cols=76 Identities=11% Similarity=0.183 Sum_probs=57.6
Q ss_pred CCCeEEEEcCc---hhHHHHHHHHHhCCCCeEEEEeCCHH---HHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLGAG---YVSRPLIEYLHRDENIHITLGSLLKE---DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILGAG---~VG~~va~~La~~~~~~VtVadR~~e---kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|.++|.|++ .+|+.+++.|++. +.+|.+++|+.+ .+++++++.+.+..+.+|++| .++++++++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 85 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRAL-GAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE--PGQLEAVFARIAEE 85 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCC--HHHHHHHHHHHHHH
Confidence 45789999953 8999999999986 478988899854 345565555555678899998 777766543
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 86 ~g~ld~lv~nAg 97 (258)
T PRK07533 86 WGRLDFLLHSIA 97 (258)
T ss_pred cCCCCEEEEcCc
Confidence 4699999975
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.05 Score=58.73 Aligned_cols=77 Identities=17% Similarity=0.259 Sum_probs=56.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.++|+|.| +|.+|+.+++.|++.+ .++++..+ +.+.++++.+.. .++..+.+|+.| .+++.++++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADG-FAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD--AAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 458999999 6999999999999874 57666555 444444443322 246788899998 777777765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 81 ~~~id~vi~~ag~ 93 (245)
T PRK12937 81 FGRIDVLVNNAGV 93 (245)
T ss_pred cCCCCEEEECCCC
Confidence 57999999753
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.051 Score=59.67 Aligned_cols=76 Identities=14% Similarity=0.227 Sum_probs=57.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHH---HHHHHcCCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDID---KVTNEFGRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe---~La~~~~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+.++++|.| +|.+|+.+++.|+++ +.+|++++|+.+..+ ++.....++..+.+|+.+ .++++++++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARH-GANLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 358999999 799999999999987 578999999875322 222112246678899998 777776655
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 82 ~id~vi~~ag 91 (263)
T PRK08226 82 RIDILVNNAG 91 (263)
T ss_pred CCCEEEECCC
Confidence 4699999875
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.038 Score=60.65 Aligned_cols=76 Identities=18% Similarity=0.274 Sum_probs=56.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+|+++|.| +|.+|+.+++.|++.+ .+|.+.++ +.++++.+.... .++..+.+|++| .+.+.++++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~ 84 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHG-FDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD--EAEVRALVARASAA 84 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 457899999 7999999999998864 67766544 555555544332 346778899998 777777664
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 85 ~~~iD~vi~~ag 96 (258)
T PRK09134 85 LGPITLLVNNAS 96 (258)
T ss_pred cCCCCEEEECCc
Confidence 3699999974
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.042 Score=61.01 Aligned_cols=75 Identities=15% Similarity=0.238 Sum_probs=57.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC----C-eeEEEeecCCCCchHHHhhcc-------
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG----R-VEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~----~-v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.++.. + +..+.+|++| .+.+.+++.
T Consensus 1 k~vlItGas~giG~~la~~la~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ-GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHG 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcC
Confidence 4799999 799999999999986 5789999999887766654431 1 3446799998 777665554
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 78 ~id~lv~~ag~ 88 (272)
T PRK07832 78 SMDVVMNIAGI 88 (272)
T ss_pred CCCEEEECCCC
Confidence 37999999853
|
|
| >PRK14030 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.12 Score=62.56 Aligned_cols=145 Identities=17% Similarity=0.117 Sum_probs=95.5
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEE--------Ee---CCHHHHHHH---HH-----------HcCCeeEEE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITL--------GS---LLKEDIDKV---TN-----------EFGRVEATL 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtV--------ad---R~~ekAe~L---a~-----------~~~~v~~v~ 616 (1201)
+.+.++|+|=|.|.||+.++++|.+. +.+|+. ++ .+.++++.+ .+ .+|+++.+
T Consensus 225 ~l~g~~vaIQGfGnVG~~aA~~L~e~-GakvVavSD~~G~i~d~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~ga~~i- 302 (445)
T PRK14030 225 DIKGKTVAISGFGNVAWGAATKATEL-GAKVVTISGPDGYIYDPDGISGEKIDYMLELRASGNDIVAPYAEKFPGSTFF- 302 (445)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEcCCceEECCCCCCHHHHHHHHHHHHhcCccHHHHHhcCCCCEEc-
Confidence 45678999999999999999999886 566554 56 566653222 21 22232221
Q ss_pred eecCCCCchHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEeccccCc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNEVGLDP 692 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e~GlDP 692 (1201)
.+ +.+-+ .+||+.+=|. ....+..-+..-.+.++.+|...- .+++ -++.-+++||.++++
T Consensus 303 ---~~---~~~~~--~~cDVliPcAl~n~I~~~na~~l~~~~ak~V~EgAN~p~t~e---A~~iL~~rGI~~vPD----- 366 (445)
T PRK14030 303 ---AG---KKPWE--QKVDIALPCATQNELNGEDADKLIKNGVLCVAEVSNMGCTAE---AIDKFIAAKQLFAPG----- 366 (445)
T ss_pred ---CC---cccee--ccccEEeeccccccCCHHHHHHHHHcCCeEEEeCCCCCCCHH---HHHHHHHCCCEEeCc-----
Confidence 11 22222 3799999886 677888888888888999999853 4444 344568899999872
Q ss_pred hhHHHHHHHHHHHhhhcCCcEEEEEeecCCCCCCCCCCCccccccccChHHHHHH
Q psy12817 693 GIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLN 747 (1201)
Q Consensus 693 GIdhmlA~~~idei~~~ggkV~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a 747 (1201)
-+-..||-+.|..-|...+- .+.|+.+.|-..
T Consensus 367 ------------~~aNAGGVivs~~E~~qn~~-----------~~~w~~eeV~~~ 398 (445)
T PRK14030 367 ------------KAVNAGGVATSGLEMSQNAM-----------HLSWSAEEVDEK 398 (445)
T ss_pred ------------ceecCCCeeeehhhhhcccc-----------ccCcCHHHHHHH
Confidence 23345676666555555431 267998877433
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.046 Score=68.34 Aligned_cols=78 Identities=19% Similarity=0.217 Sum_probs=63.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.. .++..+.+|++| .+.+.++++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~ 445 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEA-GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD--SAAVDHTVKDILAE 445 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHh
Confidence 3467899999 699999999999987 578999999998887766543 347788999998 788877765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 446 ~g~id~li~~Ag~ 458 (657)
T PRK07201 446 HGHVDYLVNNAGR 458 (657)
T ss_pred cCCCCEEEECCCC
Confidence 57999999864
|
|
| >TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.072 Score=62.10 Aligned_cols=99 Identities=20% Similarity=0.177 Sum_probs=60.9
Q ss_pred eEEEEcCchhHHHHHHHHHhCC---CCeEEE-EeCCHHHHHHHHHHcC----C----eeE---------EEeecCC-CCc
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDE---NIHITL-GSLLKEDIDKVTNEFG----R----VEA---------TLIDVNN-GGS 624 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~---~~~VtV-adR~~ekAe~La~~~~----~----v~~---------v~lDV~D-~~~ 624 (1201)
||+|.|+|+||+.+++.|.+++ +++|+. .+....+.....-+|. . ++. ..+.+.. .++
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~p 80 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPTP 80 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCCh
Confidence 6899999999999999988753 467553 3333222211111221 0 000 0111220 012
Q ss_pred hHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 625 e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+.+.=.-.++|+|+.|++...+.+.+..++++|+..|+.|.
T Consensus 81 ~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~Sa 121 (325)
T TIGR01532 81 EALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSH 121 (325)
T ss_pred hhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecC
Confidence 22221113799999999999999999999999988888864
|
Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species. |
| >COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.12 Score=57.44 Aligned_cols=119 Identities=16% Similarity=0.260 Sum_probs=82.4
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc-
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN- 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~- 644 (1201)
|+|.+||.|+||..+++.|.+. +++|++.|++++..++++.. +++ .+.. .+++.+.+....+|--++|..
T Consensus 1 M~iGmiGLGrMG~n~v~rl~~~-ghdvV~yD~n~~av~~~~~~--ga~----~a~s--l~el~~~L~~pr~vWlMvPag~ 71 (300)
T COG1023 1 MQIGMIGLGRMGANLVRRLLDG-GHDVVGYDVNQTAVEELKDE--GAT----GAAS--LDELVAKLSAPRIVWLMVPAGD 71 (300)
T ss_pred CcceeeccchhhHHHHHHHHhC-CCeEEEEcCCHHHHHHHHhc--CCc----cccC--HHHHHHhcCCCcEEEEEccCCC
Confidence 5799999999999999999986 68999999999988887764 222 1222 344555556678888888876
Q ss_pred ccHHHHH---HHHHcCCeEEEc--cCChHHHHHHHHHHHHcCCEEEeccccCchhH
Q psy12817 645 LHHHVAE---FCIQHGKNLVTA--SYLSPEMMALHERAASAGITVLNEVGLDPGID 695 (1201)
Q Consensus 645 ~h~~Vak---acIeaGkh~VD~--Syvs~e~~eLde~AkeAGVtil~e~GlDPGId 695 (1201)
....+++ .-+++|=-++|- ||..+.++.. ++.+++|+-++ .+|-.-|+.
T Consensus 72 it~~vi~~la~~L~~GDivIDGGNS~y~Ds~rr~-~~l~~kgi~fl-D~GTSGG~~ 125 (300)
T COG1023 72 ITDAVIDDLAPLLSAGDIVIDGGNSNYKDSLRRA-KLLAEKGIHFL-DVGTSGGVW 125 (300)
T ss_pred chHHHHHHHHhhcCCCCEEEECCccchHHHHHHH-HHHHhcCCeEE-eccCCCCch
Confidence 4444443 335677777876 5655554443 55678888876 366555543
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.056 Score=59.10 Aligned_cols=76 Identities=12% Similarity=0.148 Sum_probs=59.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.+.++|.| ++.+|+.+++.|++. +.+|++++|+.++++++.+.. ..+..+.+|+.| .++++++++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARL-GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS--QESIRHLFDAIEQQF 80 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 357999999 578999999999986 578999999999887765543 235567789988 777766542
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 81 g~~iD~li~nag 92 (227)
T PRK08862 81 NRAPDVLVNNWT 92 (227)
T ss_pred CCCCCEEEECCc
Confidence 5799999974
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.044 Score=59.50 Aligned_cols=77 Identities=19% Similarity=0.310 Sum_probs=57.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
+.++++|.| +|.+|+.+++.|+++ +.+|++. .|+.++.+++.+.. .++.++.+|++| .+.+.+++++
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQE-GAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK--VEDANRLVEEAVNH 81 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 358999999 799999999999987 4676654 45666655554332 247788999998 7888777765
Q ss_pred ---CcEEEEcCCC
Q psy12817 634 ---ADLVVSLLPY 643 (1201)
Q Consensus 634 ---~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 82 ~~~id~vi~~ag~ 94 (247)
T PRK12935 82 FGKVDILVNNAGI 94 (247)
T ss_pred cCCCCEEEECCCC
Confidence 6999999754
|
|
| >PLN02477 glutamate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.093 Score=62.93 Aligned_cols=142 Identities=16% Similarity=0.227 Sum_probs=91.2
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCC----------HHHHHHHHHHc------CCeeEEEeecCCCCc
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLL----------KEDIDKVTNEF------GRVEATLIDVNNGGS 624 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~----------~ekAe~La~~~------~~v~~v~lDV~D~~~ 624 (1201)
+.+.++|+|.|.|.||+.+++.|.+. +.+|+ |+|.+ .+++.+..+.. ++.+. +.+
T Consensus 203 ~l~g~~VaIqGfGnVG~~~A~~L~e~-GakVVaVsD~~G~iy~~~GLD~~~L~~~k~~~g~l~~~~~a~~----i~~--- 274 (410)
T PLN02477 203 SIAGQTFVIQGFGNVGSWAAQLIHEK-GGKIVAVSDITGAVKNENGLDIPALRKHVAEGGGLKGFPGGDP----IDP--- 274 (410)
T ss_pred CccCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCchhccccceE----ecC---
Confidence 35678999999999999999999886 46755 88876 66664433322 22111 222
Q ss_pred hHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 625 DNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 625 e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
+++-. .+||++|=|. ....+..-+.. .++.+|... .++++.. +.-+++||.+++
T Consensus 275 ~e~l~--~~~DvliP~Al~~~I~~~na~~---i~ak~I~egAN~p~t~ea~---~~L~~rGI~~~P-------------- 332 (410)
T PLN02477 275 DDILV--EPCDVLIPAALGGVINKENAAD---VKAKFIVEAANHPTDPEAD---EILRKKGVVVLP-------------- 332 (410)
T ss_pred cccee--ccccEEeeccccccCCHhHHHH---cCCcEEEeCCCCCCCHHHH---HHHHHCCcEEEC--------------
Confidence 22222 3899999885 66677665554 477788775 3555443 446789999987
Q ss_pred HHHHHhhhcCCcEEEEEeecCCCCCCCCCCCccccccccChHHHHHH
Q psy12817 701 ECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLN 747 (1201)
Q Consensus 701 ~~idei~~~ggkV~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a 747 (1201)
|-+...||-+.|+.-|+..+- .+.|+.+.+...
T Consensus 333 ---D~~aNaGGVivs~~E~~qn~~-----------~~~w~~~~v~~~ 365 (410)
T PLN02477 333 ---DIYANSGGVTVSYFEWVQNIQ-----------GFMWEEEKVNRE 365 (410)
T ss_pred ---hHHhCCCCeeeeHHHhhhccc-----------cCCCCHHHHHHH
Confidence 334456677766665665432 257887766433
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.044 Score=60.21 Aligned_cols=73 Identities=18% Similarity=0.283 Sum_probs=57.7
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----CeeEEEeecCCCCchHHHhhcc-------
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
|.++|.| ++.+|+.+++.|+ . +.+|++++|+.++++++++++. .+..+.+|+.| .+++++++.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H-GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQD--LDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCC--HHHHHHHHHHHHHhcC
Confidence 4689999 6899999999998 4 6889999999998887766541 26678999998 777765543
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 77 ~id~lv~nag 86 (246)
T PRK05599 77 EISLAVVAFG 86 (246)
T ss_pred CCCEEEEecC
Confidence 4799999864
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.035 Score=62.01 Aligned_cols=76 Identities=12% Similarity=0.268 Sum_probs=57.6
Q ss_pred CCeEEEEcCc---hhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLGAG---YVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILGAG---~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.|.++|.|++ .+|+.+++.|++. +.+|++++|+. +.++++....+.+..+.+|++| .++++++++
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~-G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKVW 82 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHC-CCEEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhhc
Confidence 4789999975 7999999999986 47888888873 3445555444456678899998 788776653
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 83 g~iD~linnAg~ 94 (262)
T PRK07984 83 PKFDGFVHSIGF 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 36999999853
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.027 Score=64.14 Aligned_cols=58 Identities=19% Similarity=0.405 Sum_probs=47.3
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~lP 642 (1201)
|||||+| .|.+|..+++.|. ++.+|+..++.. +|++| ++.+.+++++ .|+||||..
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~--~~~~v~a~~~~~-----------------~Ditd--~~~v~~~i~~~~PDvVIn~AA 59 (281)
T COG1091 1 MKILITGANGQLGTELRRALP--GEFEVIATDRAE-----------------LDITD--PDAVLEVIRETRPDVVINAAA 59 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC--CCceEEeccCcc-----------------ccccC--hHHHHHHHHhhCCCEEEECcc
Confidence 3599999 6999999999987 567777666543 68888 8889999985 699999997
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
+.
T Consensus 60 yt 61 (281)
T COG1091 60 YT 61 (281)
T ss_pred cc
Confidence 64
|
|
| >PRK08605 D-lactate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.16 Score=59.21 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=64.1
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHH-hhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIF-QELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLY 270 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a-~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y 270 (1201)
.+.-.+|.|+|.|+.|+.....+ +.+|+ .+.+|+...... ... .. .+
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~~g~----------------~V~~~d~~~~~~--~~~--~~------------~~ 190 (332)
T PRK08605 143 SIKDLKVAVIGTGRIGLAVAKIFAKGYGS----------------DVVAYDPFPNAK--AAT--YV------------DY 190 (332)
T ss_pred eeCCCEEEEECCCHHHHHHHHHHHhcCCC----------------EEEEECCCccHh--HHh--hc------------cc
Confidence 45667999999999999888877 66763 344444322111 110 00 11
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
...+ ++.++.+|+||.++--......|+..+.++. |||| ++++++|
T Consensus 191 ~~~l-~ell~~aDvIvl~lP~t~~t~~li~~~~l~~-mk~g------------------ailIN~s 236 (332)
T PRK08605 191 KDTI-EEAVEGADIVTLHMPATKYNHYLFNADLFKH-FKKG------------------AVFVNCA 236 (332)
T ss_pred cCCH-HHHHHhCCEEEEeCCCCcchhhhcCHHHHhc-CCCC------------------cEEEECC
Confidence 1122 3467789999999987777788999888888 9999 8999987
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.022 Score=55.18 Aligned_cols=86 Identities=19% Similarity=0.160 Sum_probs=60.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.+.++|+|+|.|.+|..-++.|.+. +.+|+|++.+.+..+ ..++... ..+++.++++|+|+.+++
T Consensus 5 l~~~~vlVvGgG~va~~k~~~Ll~~-gA~v~vis~~~~~~~------~~i~~~~--------~~~~~~l~~~~lV~~at~ 69 (103)
T PF13241_consen 5 LKGKRVLVVGGGPVAARKARLLLEA-GAKVTVISPEIEFSE------GLIQLIR--------REFEEDLDGADLVFAATD 69 (103)
T ss_dssp -TT-EEEEEEESHHHHHHHHHHCCC-TBEEEEEESSEHHHH------TSCEEEE--------SS-GGGCTTESEEEE-SS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEECCchhhhh------hHHHHHh--------hhHHHHHhhheEEEecCC
Confidence 4578999999999999999999986 489999999862222 2344321 234566889999999986
Q ss_pred C-cccHHHHHHHHHcCCeEEEc
Q psy12817 643 Y-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 643 ~-~~h~~VakacIeaGkh~VD~ 663 (1201)
. ..+..+.+.|-+.|+.+-..
T Consensus 70 d~~~n~~i~~~a~~~~i~vn~~ 91 (103)
T PF13241_consen 70 DPELNEAIYADARARGILVNVV 91 (103)
T ss_dssp -HHHHHHHHHHHHHTTSEEEET
T ss_pred CHHHHHHHHHHHhhCCEEEEEC
Confidence 4 45677788887777766554
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.061 Score=58.25 Aligned_cols=78 Identities=12% Similarity=0.150 Sum_probs=56.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLV------ 631 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI------ 631 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++.+.+.+ +.+..+.+|+.+.+.+.+.+++
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAA-GATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 458999999 699999999999986 578999999998877765543 2355677888641122333322
Q ss_pred --cCCcEEEEcCC
Q psy12817 632 --RSADLVVSLLP 642 (1201)
Q Consensus 632 --~~~DVVIs~lP 642 (1201)
...|+||++..
T Consensus 84 ~~~~id~vi~~ag 96 (239)
T PRK08703 84 TQGKLDGIVHCAG 96 (239)
T ss_pred hCCCCCEEEEecc
Confidence 35699999975
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.031 Score=63.82 Aligned_cols=76 Identities=20% Similarity=0.339 Sum_probs=55.6
Q ss_pred cCCCeEEEEcCch-hHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGY-VSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~-VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.++|+|+|+|. +|++++..|.+.+ ..|+++.|. + ..+.+.++++|+|||++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~g-atVtv~~~~---t----------------------~~L~~~~~~aDIvI~At 210 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNAN-ATVTICHSR---T----------------------QNLPELVKQADIIVGAV 210 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCC-CEEEEEeCC---c----------------------hhHHHHhccCCEEEEcc
Confidence 5578999999887 9999999998765 489999862 1 13555567899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccCC
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASYL 666 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Syv 666 (1201)
+.. + .+-...++.|.-++|..|.
T Consensus 211 G~~-~-~v~~~~lk~gavViDvg~n 233 (283)
T PRK14192 211 GKP-E-LIKKDWIKQGAVVVDAGFH 233 (283)
T ss_pred CCC-C-cCCHHHcCCCCEEEEEEEe
Confidence 521 1 2334556778788887664
|
|
| >PLN02700 homoserine dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.12 Score=61.40 Aligned_cols=81 Identities=17% Similarity=0.121 Sum_probs=53.1
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccC---chhHHHHHHHHHHHhh
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLD---PGIDHLLAMECIDAAH 707 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlD---PGIdhmlA~~~idei~ 707 (1201)
..+++|+|+|..-.....+.+++.|+|+|+.. ..+....++.+.+ +.|+.++-|.-+. |=|+.+ .++.
T Consensus 109 ~~~ViVD~T~s~~~~~~y~~aL~~G~hVVTaNK~~~a~~~~~~~~la-~~~~~~~yEatVgaGlPiI~tl------~~ll 181 (377)
T PLN02700 109 TGLVVVDCSASMETIGALNEAVDLGCCIVLANKKPLTSTLEDYDKLA-AHPRRIRHESTVGAGLPVIASL------NRIL 181 (377)
T ss_pred CCCEEEECCCChHHHHHHHHHHHCCCeEEcCCchHhccCHHHHHHHH-HcCCeEEEEeeeeeccchHHHH------HHHh
Confidence 36999999997444678899999999999984 3444445554545 4699888765332 433332 3343
Q ss_pred hcCCcEEEEEeec
Q psy12817 708 LNGGKVESFVSYC 720 (1201)
Q Consensus 708 ~~ggkV~sf~s~c 720 (1201)
..|.+|..++-..
T Consensus 182 ~sGd~I~~I~GIl 194 (377)
T PLN02700 182 SSGDPVHRIVGSL 194 (377)
T ss_pred hccCCEEEEEEEE
Confidence 4466777766433
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.036 Score=63.76 Aligned_cols=76 Identities=14% Similarity=0.262 Sum_probs=54.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH--HHHHHHHHHc--CCeeEEEeecCCCCchHHHhhccC--CcEEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK--EDIDKVTNEF--GRVEATLIDVNNGGSDNLSGLVRS--ADLVV 638 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~--ekAe~La~~~--~~v~~v~lDV~D~~~e~L~elI~~--~DVVI 638 (1201)
|||+|.| +|++|+.+++.|.+++...|+..++.. ...+.+.... +++..+..|+.| .+++.+++++ +|+||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICD--RAELDRIFAQHQPDAVM 78 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCC--HHHHHHHHHhcCCCEEE
Confidence 4899999 699999999999987544455555431 2222222211 246778899998 8889888874 79999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
+|...
T Consensus 79 h~A~~ 83 (352)
T PRK10084 79 HLAAE 83 (352)
T ss_pred ECCcc
Confidence 99854
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.067 Score=65.60 Aligned_cols=100 Identities=21% Similarity=0.257 Sum_probs=77.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhccC--
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVRS-- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~~-- 633 (1201)
...|+|+|-| .|.+|+.+++.+++.+--++.+.++++.+.-.+..++ | ...++-.||.| .+.+..++++
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD--~~~~~~~~~~~k 325 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRD--RDRVERAMEGHK 325 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccccc--HHHHHHHHhcCC
Confidence 4569999999 5899999999999887778999999998775554433 3 35678899998 8999999998
Q ss_pred CcEEEEcCCCc------cc------------HHHHHHHHHcCCe-EEEcc
Q psy12817 634 ADLVVSLLPYN------LH------------HHVAEFCIQHGKN-LVTAS 664 (1201)
Q Consensus 634 ~DVVIs~lP~~------~h------------~~VakacIeaGkh-~VD~S 664 (1201)
.|+|+.+.-+- ++ ..++++|+++|+. +|.+|
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iS 375 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIS 375 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEe
Confidence 99999997431 11 3467888888874 55555
|
|
| >PRK09414 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.17 Score=61.40 Aligned_cols=136 Identities=18% Similarity=0.213 Sum_probs=87.9
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEe----------CCHHHHHHHHHHc-CCeeEEE----eecCCCCch
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGS----------LLKEDIDKVTNEF-GRVEATL----IDVNNGGSD 625 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~Vt-Vad----------R~~ekAe~La~~~-~~v~~v~----lDV~D~~~e 625 (1201)
+.+.++|+|.|.|.||+.+++.|.+. +.+|+ |.| .+.+++.+..+.. ..+.-.. ....+ .+
T Consensus 229 ~l~g~rVaIqGfGnVG~~~A~~L~~~-GakVVavsDs~G~iyn~~GLD~~~L~~~k~~~~~~l~~~~~~~~~~~i~--~~ 305 (445)
T PRK09414 229 SFEGKRVVVSGSGNVAIYAIEKAQQL-GAKVVTCSDSSGYVYDEEGIDLEKLKEIKEVRRGRISEYAEEFGAEYLE--GG 305 (445)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCchhhhhhhcCCeecC--Cc
Confidence 45679999999999999999999886 46755 447 6777665554322 1111000 00111 22
Q ss_pred HHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHH
Q psy12817 626 NLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAME 701 (1201)
Q Consensus 626 ~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~ 701 (1201)
.+-++ +|||+|=|. ....+.+-+..-+..++.+|... .++++.. +.-+++||.+++
T Consensus 306 ~i~~~--d~DVliPaAl~n~It~~~a~~i~~~~akiIvEgAN~p~t~~A~---~~L~~rGI~~vP--------------- 365 (445)
T PRK09414 306 SPWSV--PCDIALPCATQNELDEEDAKTLIANGVKAVAEGANMPSTPEAI---EVFLEAGVLFAP--------------- 365 (445)
T ss_pred ccccc--CCcEEEecCCcCcCCHHHHHHHHHcCCeEEEcCCCCCCCHHHH---HHHHHCCcEEEC---------------
Confidence 33332 799999997 45677777777667788999885 3454443 446788999987
Q ss_pred HHHHhhhcCCcEEEEEeecCC
Q psy12817 702 CIDAAHLNGGKVESFVSYCGG 722 (1201)
Q Consensus 702 ~idei~~~ggkV~sf~s~cGG 722 (1201)
|-+-..||-+.|+.-|.+.
T Consensus 366 --D~laNaGGVivs~~E~~qn 384 (445)
T PRK09414 366 --GKAANAGGVATSGLEMSQN 384 (445)
T ss_pred --chhhcCCCeeeeehhhccc
Confidence 3344566777776666654
|
|
| >cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2 | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.13 Score=58.11 Aligned_cols=145 Identities=17% Similarity=0.212 Sum_probs=91.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEe----------CCHHHHHHHHH---Hc-----------CCeeEEE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGS----------LLKEDIDKVTN---EF-----------GRVEATL 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~Vt-Vad----------R~~ekAe~La~---~~-----------~~v~~v~ 616 (1201)
+.+.++|+|-|.|.||+.++++|.+. +.+|+ |.| .+.++++.+.+ .. ++.+.
T Consensus 35 ~l~g~~vaIqGfGnVG~~~a~~L~e~-GakvvaVsD~~G~i~~~~Gld~~~l~~l~~~~~~~~~~v~~~~~~~~~a~~-- 111 (254)
T cd05313 35 TLKGKRVAISGSGNVAQYAAEKLLEL-GAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKY-- 111 (254)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHhhcCCCCEE--
Confidence 45678999999999999999999886 46655 666 23444433221 11 11111
Q ss_pred eecCCCCchHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEeccccCc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEVGLDP 692 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~GlDP 692 (1201)
+. .+++-.+ +||+.+=|. ....+..-+..-.+.++.+|... .++++ -++.-+++||.+++
T Consensus 112 --~~---~~~~~~~--~~DIliPcAl~~~I~~~na~~i~~~~ak~I~EgAN~p~t~~---a~~~L~~rGI~vvP------ 175 (254)
T cd05313 112 --FE---GKKPWEV--PCDIAFPCATQNEVDAEDAKLLVKNGCKYVAEGANMPCTAE---AIEVFRQAGVLFAP------ 175 (254)
T ss_pred --eC---CcchhcC--CCcEEEeccccccCCHHHHHHHHHcCCEEEEeCCCCCCCHH---HHHHHHHCCcEEEC------
Confidence 12 2233332 799999886 66778888887777788888885 35553 44556788999988
Q ss_pred hhHHHHHHHHHHHhhhcCCcEEEEEeecCCCCCCCCCCCccccccccChHHHHHH
Q psy12817 693 GIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLN 747 (1201)
Q Consensus 693 GIdhmlA~~~idei~~~ggkV~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a 747 (1201)
|-+-..||-+.|+.-|...+- .+.|+.+.+...
T Consensus 176 -----------D~laNaGGVivs~~E~~qn~~-----------~~~w~~e~V~~~ 208 (254)
T cd05313 176 -----------GKAANAGGVAVSGLEMSQNSQ-----------RLSWTAEEVDAK 208 (254)
T ss_pred -----------chhhcCCCeeeeHHHhhcccc-----------cccCCHHHHHHH
Confidence 223345666666555554431 246876555433
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t |
| >TIGR00465 ilvC ketol-acid reductoisomerase | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.045 Score=63.45 Aligned_cols=68 Identities=21% Similarity=0.318 Sum_probs=48.4
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+.++|+|||+|.+|++++..|.+.+ ++|+++++. .+..+++. .. ++.. .+ ..++++++|+|+.++|
T Consensus 2 ~~kkIgiIG~G~mG~AiA~~L~~sG-~~Viv~~~~~~~~~~~a~-~~-Gv~~-----~s-----~~ea~~~ADiVvLaVp 68 (314)
T TIGR00465 2 KGKTVAIIGYGSQGHAQALNLRDSG-LNVIVGLRKGGASWKKAT-ED-GFKV-----GT-----VEEAIPQADLIMNLLP 68 (314)
T ss_pred CcCEEEEEeEcHHHHHHHHHHHHCC-CeEEEEECcChhhHHHHH-HC-CCEE-----CC-----HHHHHhcCCEEEEeCC
Confidence 3589999999999999999998764 677766554 33444433 32 3431 12 4556788999999998
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 69 p~ 70 (314)
T TIGR00465 69 DE 70 (314)
T ss_pred cH
Confidence 76
|
This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.065 Score=63.78 Aligned_cols=109 Identities=15% Similarity=0.125 Sum_probs=0.0
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
....++|+|||+|.||+.+++.|... +.+|.+.||+....+..... ++.. ...++++++++|+|+.++
T Consensus 189 ~L~gktVGIvG~G~IG~~vA~~l~~f-G~~V~~~dr~~~~~~~~~~~--g~~~---------~~~l~ell~~aDvV~l~l 256 (385)
T PRK07574 189 DLEGMTVGIVGAGRIGLAVLRRLKPF-DVKLHYTDRHRLPEEVEQEL--GLTY---------HVSFDSLVSVCDVVTIHC 256 (385)
T ss_pred ecCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEECCCCCchhhHhhc--Ccee---------cCCHHHHhhcCCEEEEcC
Q ss_pred CCcccHHHH-----HHHHHcCCeEEEccC-ChHHHHHHHHHHHHcCC
Q psy12817 642 PYNLHHHVA-----EFCIQHGKNLVTASY-LSPEMMALHERAASAGI 682 (1201)
Q Consensus 642 P~~~h~~Va-----kacIeaGkh~VD~Sy-vs~e~~eLde~AkeAGV 682 (1201)
|..-...-+ -+.++.|.-+|+++- ..-...+|.++.++..+
T Consensus 257 Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i 303 (385)
T PRK07574 257 PLHPETEHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHL 303 (385)
T ss_pred CCCHHHHHHhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCc
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.038 Score=64.38 Aligned_cols=94 Identities=13% Similarity=0.154 Sum_probs=68.6
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|.|+|.|+.|+...+.++.+|+ .+.+|+...... .....+.. +.
T Consensus 147 ~L~gktvgIiG~G~IG~~vA~~l~~~G~----------------~V~~~d~~~~~~--~~~~~~~~------------~~ 196 (333)
T PRK13243 147 DVYGKTIGIIGFGRIGQAVARRAKGFGM----------------RILYYSRTRKPE--AEKELGAE------------YR 196 (333)
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC----------------EEEEECCCCChh--hHHHcCCE------------ec
Confidence 4566899999999999999999999984 355565432111 11111211 11
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
. .+++++.+|+|+.++-..+.+-.+|..+.++. |||| ++++++|
T Consensus 197 -~-l~ell~~aDiV~l~lP~t~~T~~~i~~~~~~~-mk~g------------------a~lIN~a 240 (333)
T PRK13243 197 -P-LEELLRESDFVSLHVPLTKETYHMINEERLKL-MKPT------------------AILVNTA 240 (333)
T ss_pred -C-HHHHHhhCCEEEEeCCCChHHhhccCHHHHhc-CCCC------------------eEEEECc
Confidence 1 23567889999999998888888999999988 9999 8899886
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.0099 Score=60.93 Aligned_cols=71 Identities=20% Similarity=0.199 Sum_probs=51.4
Q ss_pred CeEEEEcC-chhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcC------CeeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 566 RNVLLLGA-GYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFG------RVEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 566 kKVLILGA-G~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~------~v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
+||.|+|+ |.+|..++..|...+-. ++.+.|++.++++..+..+. ... ..... ...+.++++|+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~-~~i~~------~~~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSP-VRITS------GDYEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEE-EEEEE------SSGGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccc-ccccc------ccccccccccEE
Confidence 69999998 99999999999876443 59999999888877665431 122 12211 234556799999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
|.+...
T Consensus 74 vitag~ 79 (141)
T PF00056_consen 74 VITAGV 79 (141)
T ss_dssp EETTST
T ss_pred EEeccc
Confidence 999843
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.043 Score=60.19 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=57.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
+.+.++|.| +|.+|+.+++.|++. +.+|.+.+|+.+ .++++.+.. .++..+.+|+.| .+.+.+++++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQA-GADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 457899999 799999999999986 578989998753 334443322 246778899998 7777766653
Q ss_pred ---CcEEEEcCCC
Q psy12817 634 ---ADLVVSLLPY 643 (1201)
Q Consensus 634 ---~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 84 ~g~id~li~~ag~ 96 (254)
T PRK06114 84 LGALTLAVNAAGI 96 (254)
T ss_pred cCCCCEEEECCCC
Confidence 5999999853
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.059 Score=57.16 Aligned_cols=78 Identities=15% Similarity=0.255 Sum_probs=56.8
Q ss_pred ccCCeEEEEEcCcH-HHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccc
Q psy12817 192 SIGPLTIVFTGSGN-VSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLY 270 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~-vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y 270 (1201)
++.-.+++|+|+|. +|..+...+.+.| +.+.+.... ++ +.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g----------------~~V~v~~r~--------------~~--------~l- 81 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRN----------------ATVTVCHSK--------------TK--------NL- 81 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCC----------------CEEEEEECC--------------ch--------hH-
Confidence 56679999999997 6999999998887 333333311 00 11
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCC
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADP 339 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~ 339 (1201)
.+.++.+|+||+++. .|.+|+.+++ +++ .+|+|++.+.
T Consensus 82 -----~~~l~~aDiVIsat~----~~~ii~~~~~----~~~------------------~viIDla~pr 119 (168)
T cd01080 82 -----KEHTKQADIVIVAVG----KPGLVKGDMV----KPG------------------AVVIDVGINR 119 (168)
T ss_pred -----HHHHhhCCEEEEcCC----CCceecHHHc----cCC------------------eEEEEccCCC
Confidence 235778999999964 4568999974 556 8999999876
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2 | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.07 Score=64.31 Aligned_cols=97 Identities=16% Similarity=0.162 Sum_probs=64.1
Q ss_pred eEEEEcCchhHHHHHHHHHhCCC-----CeEEEEeCCHH-------------------HHHHHH----HHcCCeeE--EE
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDEN-----IHITLGSLLKE-------------------DIDKVT----NEFGRVEA--TL 616 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~-----~~VtVadR~~e-------------------kAe~La----~~~~~v~~--v~ 616 (1201)
||+|+|+|.+|..++++|+..+- -+++|+|.+.= +++..+ +..|.+.. ..
T Consensus 1 kVlvVGaGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~~ 80 (435)
T cd01490 1 KVFLVGAGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITALQ 80 (435)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence 69999999999999999998754 47888875321 332222 22244443 32
Q ss_pred eecCCCCchH-H-HhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 617 IDVNNGGSDN-L-SGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lDV~D~~~e~-L-~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
..+.. +.+. + .+++++.|+||+|+-. .....+.+.|...++.+++..
T Consensus 81 ~~v~~-~~~~~~~~~f~~~~DvVi~alDn~~aR~~vn~~C~~~~iPli~~g 130 (435)
T cd01490 81 NRVGP-ETEHIFNDEFWEKLDGVANALDNVDARMYVDRRCVYYRKPLLESG 130 (435)
T ss_pred cccCh-hhhhhhhHHHhcCCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 22321 0111 1 3567889999999843 334568899999999999864
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1. |
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.43 Score=55.75 Aligned_cols=88 Identities=11% Similarity=0.141 Sum_probs=63.3
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|.|+|.|+.|+...+.++.+|. ++..||....+. .+..++. + .
T Consensus 139 el~gkTvGIiG~G~IG~~va~~l~afgm----------------~v~~~d~~~~~~--~~~~~~~-~------------~ 187 (324)
T COG0111 139 ELAGKTVGIIGLGRIGRAVAKRLKAFGM----------------KVIGYDPYSPRE--RAGVDGV-V------------G 187 (324)
T ss_pred cccCCEEEEECCCHHHHHHHHHHHhCCC----------------eEEEECCCCchh--hhccccc-e------------e
Confidence 3556899999999999999999999993 456665422221 1111121 1 0
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
-.-.+++++.+|+|+...=-.+.+=.+|..+.+.. ||+|
T Consensus 188 ~~~Ld~lL~~sDiv~lh~PlT~eT~g~i~~~~~a~-MK~g 226 (324)
T COG0111 188 VDSLDELLAEADILTLHLPLTPETRGLINAEELAK-MKPG 226 (324)
T ss_pred cccHHHHHhhCCEEEEcCCCCcchhcccCHHHHhh-CCCC
Confidence 11123578899999998888788889999999999 9999
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.035 Score=61.35 Aligned_cols=70 Identities=11% Similarity=0.205 Sum_probs=56.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++. .++..+.+|++| ++.++++++ ..
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~-G~~Vi~~~r~~~~~-------~~~~~~~~D~~~--~~~i~~~~~~~~~~~~~i 73 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEE-GSNVINFDIKEPSY-------NDVDYFKVDVSN--KEQVIKGIDYVISKYGRI 73 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCcccc-------CceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 3458999999 699999999999986 57899999986542 146788999998 777776654 57
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|+||++..
T Consensus 74 d~li~~Ag 81 (258)
T PRK06398 74 DILVNNAG 81 (258)
T ss_pred CEEEECCC
Confidence 99999874
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.06 Score=61.67 Aligned_cols=72 Identities=18% Similarity=0.208 Sum_probs=55.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLL 641 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~l 641 (1201)
++|||.| +|+||+.++..|.+. +++|+|.|.-.. ..+.+... .++.++.|+.| .+.|++.+++ .|.||...
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~-G~~vvV~DNL~~g~~~~v~~~--~~~f~~gDi~D--~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT-GHEVVVLDNLSNGHKIALLKL--QFKFYEGDLLD--RALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC-CCeEEEEecCCCCCHHHhhhc--cCceEEecccc--HHHHHHHHHhcCCCEEEECc
Confidence 5899998 999999999999985 688998886432 23333221 15788999998 8889998874 79999986
Q ss_pred C
Q psy12817 642 P 642 (1201)
Q Consensus 642 P 642 (1201)
.
T Consensus 76 a 76 (329)
T COG1087 76 A 76 (329)
T ss_pred c
Confidence 4
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.062 Score=58.55 Aligned_cols=75 Identities=13% Similarity=0.127 Sum_probs=55.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-EDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+|.|+|.| +|.+|+.+++.|+++ +.+|++.+|+. +..++..+.. .++.++.+|++| .+++.++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAA-GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVAD--LSAHEAMLDAAQAAW 78 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHhc
Confidence 36788999 799999999999987 57888888753 3333332221 257788999998 777766554
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 79 ~~id~vi~~ag 89 (256)
T PRK12745 79 GRIDCLVNNAG 89 (256)
T ss_pred CCCCEEEECCc
Confidence 5799999974
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.071 Score=59.46 Aligned_cols=77 Identities=18% Similarity=0.285 Sum_probs=57.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-------HHHHHHHc----CCeeEEEeecCCCCchHHHhhc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-------IDKVTNEF----GRVEATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-------Ae~La~~~----~~v~~v~lDV~D~~~e~L~elI 631 (1201)
++++++|.| +|.+|+.+++.|+++ +.+|++.+|+.+. .+.+++.. .++..+.+|+++ .+.+.+++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~ 81 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARD-GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD--EDQVAAAV 81 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHH
Confidence 357899999 699999999999987 5789999987542 22222221 246778899998 77777666
Q ss_pred c-------CCcEEEEcCCC
Q psy12817 632 R-------SADLVVSLLPY 643 (1201)
Q Consensus 632 ~-------~~DVVIs~lP~ 643 (1201)
+ ..|+||++...
T Consensus 82 ~~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 82 AKAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHHhCCCCEEEECCCC
Confidence 5 57999999854
|
|
| >PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.035 Score=65.58 Aligned_cols=84 Identities=15% Similarity=0.202 Sum_probs=59.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC------CCeEEEEeCCHH-----HHHHHHHHc------CCeeE-EEeecCCCCchH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE------NIHITLGSLLKE-----DIDKVTNEF------GRVEA-TLIDVNNGGSDN 626 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~------~~~VtVadR~~e-----kAe~La~~~------~~v~~-v~lDV~D~~~e~ 626 (1201)
.+||.|||+|..|.+++..|+++. +.+|.+..|+++ .++.+.... |+++. -.+.++ .+
T Consensus 11 ~~ki~ViGaG~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~t----sd 86 (365)
T PTZ00345 11 PLKVSVIGSGNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAV----SD 86 (365)
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEe----cC
Confidence 479999999999999999999874 267999999876 355555433 22211 011122 24
Q ss_pred HHhhccCCcEEEEcCCCcccHHHHHH
Q psy12817 627 LSGLVRSADLVVSLLPYNLHHHVAEF 652 (1201)
Q Consensus 627 L~elI~~~DVVIs~lP~~~h~~Vaka 652 (1201)
+.++++++|+||.++|.+....+++.
T Consensus 87 l~eav~~aDiIvlAVPsq~l~~vl~~ 112 (365)
T PTZ00345 87 LKEAVEDADLLIFVIPHQFLESVLSQ 112 (365)
T ss_pred HHHHHhcCCEEEEEcChHHHHHHHHH
Confidence 67788999999999998776666554
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.053 Score=60.99 Aligned_cols=77 Identities=13% Similarity=0.321 Sum_probs=57.7
Q ss_pred CCCeEEEEcC---chhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLGA---GYVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILGA---G~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|.++|.|+ +.+|+.+++.|++. +.+|++++|+. ++++++.+.++....+.+|++| .++++++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQ-GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 3579999996 58999999999986 57898999985 3455555554322568899998 777766553
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 81 ~g~iDilVnnAG~ 93 (274)
T PRK08415 81 LGKIDFIVHSVAF 93 (274)
T ss_pred cCCCCEEEECCcc
Confidence 46999999753
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.074 Score=65.30 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=68.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCC-C-----------Cc------hH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNN-G-----------GS------DN 626 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D-~-----------~~------e~ 626 (1201)
..||+|+|+|.+|..++..+...+ ..|+++|++.++.+... .+ +.+.+.+|..+ + ++ +.
T Consensus 164 ~akVlViGaG~iGl~Aa~~ak~lG-A~V~v~d~~~~rle~a~-~l-Ga~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 164 PAKVLVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQ-SM-GAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHH-Hc-CCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 479999999999999999988874 57999999998766544 45 45665555311 0 00 11
Q ss_pred HHhhccCCcEEEEcC-----CCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 627 LSGLVRSADLVVSLL-----PYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 627 L~elI~~~DVVIs~l-----P~~-~h~~VakacIeaGkh~VD~S 664 (1201)
+.+.++++|+||+++ |.. +-.+-+...++.|.-+||++
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA 284 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLA 284 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEee
Confidence 556678899999998 332 22233356678888899985
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.061 Score=57.99 Aligned_cols=76 Identities=13% Similarity=0.190 Sum_probs=56.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+++|+|.| +|.+|+.+++.|.+. +.+|.+.+|+.+ .++++.... .++..+.+|+.| .+.+.++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLND-GYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD--TEECAEALAEIEEEE 78 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 46889999 799999999999987 478988888843 333333322 247788899998 777766654
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~id~vi~~ag~ 90 (245)
T PRK12824 79 GPVDILVNNAGI 90 (245)
T ss_pred CCCCEEEECCCC
Confidence 47999999854
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.067 Score=57.43 Aligned_cols=77 Identities=19% Similarity=0.305 Sum_probs=55.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
++++|+|.| +|++|+.+++.|++. +.+|++..|+.. ..+.+...+ .++..+..|+.| .+.+.++++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQ-GANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 457999999 799999999999986 578877766544 333333322 246677789998 777766554
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 57999999753
|
|
| >KOG2017|consensus | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.032 Score=64.38 Aligned_cols=104 Identities=19% Similarity=0.260 Sum_probs=69.7
Q ss_pred cccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-------------------HHHHHHHHc----CCeeEE
Q psy12817 559 DIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-------------------DIDKVTNEF----GRVEAT 615 (1201)
Q Consensus 559 ~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-------------------kAe~La~~~----~~v~~v 615 (1201)
+..+.+..+|+|+|||..|.+++.||+..+--++-++|.+.- |++..++.. +.++..
T Consensus 60 GQ~~Lk~s~VLVVGaGGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs~v~v~ 139 (427)
T KOG2017|consen 60 GQLSLKNSSVLVVGAGGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNSHVEVQ 139 (427)
T ss_pred cccccCCccEEEEccCCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCceee
Confidence 334567789999999999999999999875445555554321 222222211 333322
Q ss_pred Eee-cCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 616 LID-VNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 616 ~lD-V~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~S 664 (1201)
.-. ..+ .+...+++++.|+|.+|+-.. ..+.+-..|.-.|+.+|..|
T Consensus 140 ~y~~~L~--~sNa~~Ii~~YdvVlDCTDN~~TRYLisD~CVlLgkpLVSgS 188 (427)
T KOG2017|consen 140 TYNEFLS--SSNAFDIIKQYDVVLDCTDNVPTRYLISDVCVLLGKPLVSGS 188 (427)
T ss_pred echhhcc--chhHHHHhhccceEEEcCCCccchhhhhhHHHHcCCcccccc
Confidence 111 122 456778899999999999443 34678889999999998865
|
|
| >TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.078 Score=60.76 Aligned_cols=111 Identities=15% Similarity=0.186 Sum_probs=77.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs 639 (1201)
+..||+|.| .|..|+.+.+.|...+ +. .++.-++.+ .++ ..+++. ...+.++-.. .|++|.
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~g-~~-~v~~V~p~~~~~~----v~G~~~---------y~sv~dlp~~~~~Dlavi 69 (286)
T TIGR01019 5 KDTKVIVQGITGSQGSFHTEQMLAYG-TN-IVGGVTPGKGGTT----VLGLPV---------FDSVKEAVEETGANASVI 69 (286)
T ss_pred CCCcEEEecCCcHHHHHHHHHHHhCC-CC-EEEEECCCCCcce----ecCeec---------cCCHHHHhhccCCCEEEE
Confidence 357999999 8999999999997764 44 455555542 111 112222 2245555444 799999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEE-c-c-CChHHHHHHHHHHHHcCCEEE--eccc
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVT-A-S-YLSPEMMALHERAASAGITVL--NEVG 689 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD-~-S-yvs~e~~eLde~AkeAGVtil--~e~G 689 (1201)
++|...-+++++.|.+.|+..+- . + +-....++|.+.|+++|+.++ |.+|
T Consensus 70 ~vpa~~v~~~l~e~~~~Gvk~avIis~Gf~e~~~~~l~~~a~~~girilGPNc~G 124 (286)
T TIGR01019 70 FVPAPFAADAIFEAIDAGIELIVCITEGIPVHDMLKVKRYMEESGTRLIGPNCPG 124 (286)
T ss_pred ecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEECCCCce
Confidence 99999889999999999986433 2 3 333335789899999999998 4455
|
ATP citrate lyases appear to form an outgroup. |
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.08 Score=64.44 Aligned_cols=92 Identities=18% Similarity=0.150 Sum_probs=61.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
...++||+|+|+|.+|++++++|.+.+ .+|++.|++.....++.... +++.... .+ . .+.+.++|+||-.-
T Consensus 12 ~~~~~~v~v~G~G~sG~a~a~~L~~~G-~~V~~~D~~~~~~~~~l~~~-gi~~~~~--~~--~---~~~~~~~d~vV~Sp 82 (473)
T PRK00141 12 QELSGRVLVAGAGVSGRGIAAMLSELG-CDVVVADDNETARHKLIEVT-GVADIST--AE--A---SDQLDSFSLVVTSP 82 (473)
T ss_pred cccCCeEEEEccCHHHHHHHHHHHHCC-CEEEEECCChHHHHHHHHhc-CcEEEeC--CC--c---hhHhcCCCEEEeCC
Confidence 456789999999999999999999875 59999999876655544433 4543221 11 1 12345788887653
Q ss_pred CCcccHHHHHHHHHcCCeEEE
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD 662 (1201)
......+..++|.+.|+.++.
T Consensus 83 gi~~~~p~~~~a~~~gi~v~~ 103 (473)
T PRK00141 83 GWRPDSPLLVDAQSQGLEVIG 103 (473)
T ss_pred CCCCCCHHHHHHHHCCCceee
Confidence 222333556677888988875
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.055 Score=59.64 Aligned_cols=77 Identities=10% Similarity=0.261 Sum_probs=57.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEe-CCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGS-LLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVad-R~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
.+.|+|+|.| ++.+|+.+++.|++. +.+|++++ ++.++++.+++.. .++.++.+|++| .++++++++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~ 82 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQS-GVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE--PETYKELFKKID 82 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHH
Confidence 4568999999 699999999999986 56777765 5666665554332 246788999998 777766654
Q ss_pred ----CCcEEEEcCC
Q psy12817 633 ----SADLVVSLLP 642 (1201)
Q Consensus 633 ----~~DVVIs~lP 642 (1201)
..|++|++..
T Consensus 83 ~~~g~id~lv~nAg 96 (260)
T PRK08416 83 EDFDRVDFFISNAI 96 (260)
T ss_pred HhcCCccEEEECcc
Confidence 4799999874
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.054 Score=60.69 Aligned_cols=76 Identities=14% Similarity=0.278 Sum_probs=58.4
Q ss_pred CCeEEEEcC---chhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLGA---GYVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILGA---G~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.|.++|.|+ +.+|+.+++.|++. +.+|++.+|+. ++++++.+.++....+.+|++| .++++++++
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~-G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAA-GAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD--EASIDAVFETLEKKW 86 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC--HHHHHHHHHHHHHhc
Confidence 478999996 58999999999986 57888888763 5566666665445678899998 777776653
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 37999999753
|
|
| >PLN02775 Probable dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.15 Score=58.45 Aligned_cols=125 Identities=13% Similarity=0.115 Sum_probs=78.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-----cCCc-
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITL-GSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-----RSAD- 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtV-adR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-----~~~D- 635 (1201)
+..||+|.| .|+||+.+++.+.+ .+++++- .++.+. .+.+.-.+.+.. + -+.. ++++.+.+ +.+|
T Consensus 10 ~~i~V~V~Ga~G~MG~~~~~av~~-~~~~Lv~~~~~~~~-~~~~~~~~~g~~-v--~~~~--~~dl~~~l~~~~~~~~~~ 82 (286)
T PLN02775 10 SAIPIMVNGCTGKMGHAVAEAAVS-AGLQLVPVSFTGPA-GVGVTVEVCGVE-V--RLVG--PSEREAVLSSVKAEYPNL 82 (286)
T ss_pred CCCeEEEECCCChHHHHHHHHHhc-CCCEEEEEeccccc-cccccceeccce-e--eeec--CccHHHHHHHhhccCCCE
Confidence 347999999 69999999999998 7888553 444332 111110111221 1 1221 12344444 2489
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHH
Q psy12817 636 LVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLL 698 (1201)
Q Consensus 636 VVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhml 698 (1201)
|||+-+-+..-...++.|+++|+++|.-+ +..++ +.+.++++++.++..--|.-|+.-|+
T Consensus 83 VvIDFT~P~a~~~~~~~~~~~g~~~VvGTTG~~~e~---l~~~~~~~~i~vv~apNfSiGv~ll~ 144 (286)
T PLN02775 83 IVVDYTLPDAVNDNAELYCKNGLPFVMGTTGGDRDR---LLKDVEESGVYAVIAPQMGKQVVAFQ 144 (286)
T ss_pred EEEECCChHHHHHHHHHHHHCCCCEEEECCCCCHHH---HHHHHhcCCccEEEECcccHHHHHHH
Confidence 89999855666788999999999988753 44443 33445567887777666666765444
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.063 Score=61.21 Aligned_cols=78 Identities=19% Similarity=0.190 Sum_probs=58.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.++++|.| +|.+|+.+++.|++. +.+|++.++. .++++++++.. .++..+.+|+.| .+.+.++++
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~-Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d--~~~~~~~~~~~~~ 86 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARL-GATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ--RATADELVATAVG 86 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHH
Confidence 4568999999 689999999999987 5688888874 34455544432 246678899998 777777664
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 87 ~g~iD~li~nAG~ 99 (306)
T PRK07792 87 LGGLDIVVNNAGI 99 (306)
T ss_pred hCCCCEEEECCCC
Confidence 47999999753
|
|
| >COG0476 ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.096 Score=58.50 Aligned_cols=99 Identities=20% Similarity=0.273 Sum_probs=69.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-------------------HHHH----HHHHcCCeeEE--Ee
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-------------------DIDK----VTNEFGRVEAT--LI 617 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-------------------kAe~----La~~~~~v~~v--~l 617 (1201)
.+.-||+|+|+|..|.+++.+|+..+.-+++++|.+.- +++. +.+..|.+... ..
T Consensus 28 l~~s~vlvvG~GglG~~~~~~la~aGvg~l~i~D~d~v~~snL~rq~~~~~~dig~~Ka~~a~~~l~~ln~~v~v~~~~~ 107 (254)
T COG0476 28 LKDSRVLVVGAGGLGSPAAKYLALAGVGKLTIVDFDTVELSNLQRQFLFTEADVGKPKAEVAAKALRKLNPLVEVVAYLE 107 (254)
T ss_pred HhhCCEEEEecChhHHHHHHHHHHcCCCeEEEEcCCcccccccCceeeecccccCCcHHHHHHHHHHHhCCCCeEEEeec
Confidence 44579999999999999999999887666887775432 2222 22222444332 22
Q ss_pred ecCCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 618 DVNNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 618 DV~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
.+. .+...+++++.|+|++|+-. .....+-.+|.+.++.+++.+
T Consensus 108 ~l~---~~~~~~~~~~~d~v~d~~dn~~~r~~iN~~~~~~~~pli~~~ 152 (254)
T COG0476 108 RLD---EENAEELIAQFDVVLDCTDNFETRYLINDACVKLGIPLVHGG 152 (254)
T ss_pred ccC---hhhHHHHhccCCEEEECCCCHHHHHHHHHHHHHhCCCeEeee
Confidence 232 44567889999999999854 345678889999999988864
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.02 Score=66.24 Aligned_cols=68 Identities=19% Similarity=0.299 Sum_probs=51.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|.|.||+.+++.|... +.+|.+.+++.++.. ++... .. .+++.++++++|+|+.++|
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~af-G~~V~~~~~~~~~~~-------~~~~~----~~--~~~l~e~l~~aDvvv~~lP 199 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTW-GFPLRCWSRSRKSWP-------GVQSF----AG--REELSAFLSQTRVLINLLP 199 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCCCCC-------Cceee----cc--cccHHHHHhcCCEEEECCC
Confidence 3458999999999999999999875 678999998754321 11111 11 3468999999999999999
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 200 lt 201 (312)
T PRK15469 200 NT 201 (312)
T ss_pred CC
Confidence 64
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.11 Score=65.17 Aligned_cols=76 Identities=18% Similarity=0.324 Sum_probs=55.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHh-CCCCeEEEEeCCHH--HHHHHHHHc--CCeeEEEeecCCCC----chHHHhhccCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHR-DENIHITLGSLLKE--DIDKVTNEF--GRVEATLIDVNNGG----SDNLSGLVRSAD 635 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~-~~~~~VtVadR~~e--kAe~La~~~--~~v~~v~lDV~D~~----~e~L~elI~~~D 635 (1201)
|+|+|.| +|++|+.+++.|.+ ..+.+|++.+|+.. +.+.+...+ ++++.+..|+.|.+ .+.++++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 4899999 79999999999985 34678999999643 333333322 46788888988610 1345555 8999
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
+||+|..
T Consensus 80 ~Vih~Aa 86 (657)
T PRK07201 80 HVVHLAA 86 (657)
T ss_pred EEEECce
Confidence 9999984
|
|
| >TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.038 Score=67.84 Aligned_cols=77 Identities=17% Similarity=0.220 Sum_probs=52.7
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---------CC-eeE-------EEeecCCCCchH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---------GR-VEA-------TLIDVNNGGSDN 626 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---------~~-v~~-------v~lDV~D~~~e~ 626 (1201)
..+||.|||+|.||+.++..+++. +++|++.|++++++++..+.. .+ ... -.+...+ +
T Consensus 4 ~~~kV~VIGaG~MG~gIA~~la~a-G~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~----~ 78 (503)
T TIGR02279 4 NVVTVAVIGAGAMGAGIAQVAASA-GHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVT----D 78 (503)
T ss_pred CccEEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeC----C
Confidence 357899999999999999999876 689999999999886532110 01 000 0011111 2
Q ss_pred HHhhccCCcEEEEcCCCccc
Q psy12817 627 LSGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 627 L~elI~~~DVVIs~lP~~~h 646 (1201)
+++ ++++|+||.|+|-...
T Consensus 79 ~~~-l~~aDlVIEav~E~~~ 97 (503)
T TIGR02279 79 LHA-LADAGLVIEAIVENLE 97 (503)
T ss_pred HHH-hCCCCEEEEcCcCcHH
Confidence 433 4699999999997553
|
This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.053 Score=58.91 Aligned_cols=72 Identities=13% Similarity=0.110 Sum_probs=56.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC-------Cc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS-------AD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~-------~D 635 (1201)
..++++|.| +|.+|+.+++.|++. +.+|++.+|+. . .....++..+.+|+.| .+.+.+++++ .|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~-G~~v~~~~~~~--~---~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 78 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEA-GAKVIGFDQAF--L---TQEDYPFATFVLDVSD--AAAVAQVCQRLLAETGPLD 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecch--h---hhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 457899999 689999999999986 57899999986 1 1112257788999998 7788777654 79
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 79 ~vi~~ag~ 86 (252)
T PRK08220 79 VLVNAAGI 86 (252)
T ss_pred EEEECCCc
Confidence 99999743
|
|
| >TIGR03450 mycothiol_INO1 inositol 1-phosphate synthase, Actinobacterial type | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.16 Score=59.17 Aligned_cols=157 Identities=15% Similarity=0.217 Sum_probs=90.9
Q ss_pred CeEEEEcCchhHHHHHHHHH---hCC-------------------CCeE-EEEeCCHHHH----HHHHHHcCCeeEEEee
Q psy12817 566 RNVLLLGAGYVSRPLIEYLH---RDE-------------------NIHI-TLGSLLKEDI----DKVTNEFGRVEATLID 618 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La---~~~-------------------~~~V-tVadR~~ekA----e~La~~~~~v~~v~lD 618 (1201)
.||+|+|-|..++.+++-+. +.. ++++ ...|-+..+. .+..-..||++....|
T Consensus 1 irvai~GvGncaSslvqGieyyk~~~~~~~~~Glm~~~~g~y~~~DIe~vaafDVd~~KVGkdlseai~~~pN~t~~~~~ 80 (351)
T TIGR03450 1 VRVAIVGVGNCASSLVQGVEYYYNADPTSTVPGLMHVQFGPYHVGDVEFVAAFDVDAKKVGFDLSDAIFASENNTIKIAD 80 (351)
T ss_pred CeEEEEeccHHHHHHHHHHHHHHhCCCccCcCCccccccCCcCccceEEEEEEeccccccCccHHHHHhcCCCCceeeec
Confidence 38999999999999987543 210 1232 2345444433 1222233565555444
Q ss_pred cC------------CC--------------CchHHHhhcc--CCcEEEEcCCCccc---HHHHHHHHHcCCeEEEccC-C
Q psy12817 619 VN------------NG--------------GSDNLSGLVR--SADLVVSLLPYNLH---HHVAEFCIQHGKNLVTASY-L 666 (1201)
Q Consensus 619 V~------------D~--------------~~e~L~elI~--~~DVVIs~lP~~~h---~~VakacIeaGkh~VD~Sy-v 666 (1201)
+- || ..+++.+.++ ++||+||.+|.... .-.|.+|+++|+.+|.... .
T Consensus 81 vp~~~v~V~~G~~lDg~~~~~~~~~~~~~~~~~dv~~~lk~~~~dVlvnylPvGs~~A~~~YA~AAl~aG~afVN~~P~~ 160 (351)
T TIGR03450 81 VPPTGVTVQRGPTLDGLGKYYRDTIEESDAEPVDVVQALKDAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVF 160 (351)
T ss_pred cCCCCCEEeecccccchhhHhhccccccccCHHHHHHHHHhcCCCEEEECCccchHHHHHHHHHHHHHcCCceEeccCcc
Confidence 22 10 1223444454 59999999997542 4568999999999999864 1
Q ss_pred hHHHHHHHHHHHHcCCEEEeccccC-chhHHHHHHHHHHHhhhcCCcEEEEEee-cCCC
Q psy12817 667 SPEMMALHERAASAGITVLNEVGLD-PGIDHLLAMECIDAAHLNGGKVESFVSY-CGGL 723 (1201)
Q Consensus 667 s~e~~eLde~AkeAGVtil~e~GlD-PGIdhmlA~~~idei~~~ggkV~sf~s~-cGGL 723 (1201)
.....++.+.++++|+.++..=+-. -|-+ ++-.-+.+-+.++|-++++..++ .||-
T Consensus 161 ia~~p~~a~~f~e~glPi~GDD~Ksq~GaT-i~h~vLa~lf~~Rgl~v~~~yq~NigGN 218 (351)
T TIGR03450 161 IASDPEWAKKFTDAGVPIVGDDIKSQVGAT-ITHRVLAKLFEDRGVRLDRTMQLNVGGN 218 (351)
T ss_pred ccCCHHHHHHHHHCCCCEecccccccCCCc-hHHHHHHHHHHHcCCceeeEEEEeecCc
Confidence 2244567778999999987421110 1211 11122334455677788776554 3553
|
This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid. |
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.083 Score=58.12 Aligned_cols=77 Identities=8% Similarity=0.144 Sum_probs=57.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++++|+.. ++.+..+.. .++..+.+|++| .+++.++++ .
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKA-GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence 458899999 799999999999986 678888888643 222222222 246788999998 777777765 4
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|++|++...
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 7999999753
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.059 Score=68.48 Aligned_cols=78 Identities=26% Similarity=0.349 Sum_probs=62.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
...++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++.+...+ + .+..+.+|++| .+++.++++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~-Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd--~~~v~~a~~~i~ 488 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD--EQAVKAAFADVA 488 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC--HHHHHHHHHHHH
Confidence 3468999999 699999999999986 579999999998877665442 1 35678899998 778877765
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 489 ~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 489 LAYGGVDIVVNNAGI 503 (676)
T ss_pred HhcCCCcEEEECCCC
Confidence 57999999853
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.061 Score=60.24 Aligned_cols=77 Identities=12% Similarity=0.228 Sum_probs=56.2
Q ss_pred CCCeEEEEcCc---hhHHHHHHHHHhCCCCeEEEEeCCHHH---HHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLGAG---YVSRPLIEYLHRDENIHITLGSLLKED---IDKVTNEFGRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILGAG---~VG~~va~~La~~~~~~VtVadR~~ek---Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|.++|.|++ .+|+.+++.|++. +.+|++++|+.+. ++++.+..+....+.+|++| .++++++++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~ 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQ-GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhC-CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence 34789999965 7999999999986 5789888987643 33443333333467899998 777766653
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 83 ~g~iD~lVnnAG~ 95 (271)
T PRK06505 83 WGKLDFVVHAIGF 95 (271)
T ss_pred hCCCCEEEECCcc
Confidence 47999999753
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.069 Score=58.68 Aligned_cols=76 Identities=12% Similarity=0.139 Sum_probs=56.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|.++ .++.++++++.+.. .++..+.+|++| .+.+++++.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ-GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 57899999 699999999999987 5777766 45666665555432 247788899998 777666554
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~~id~li~~ag~ 90 (256)
T PRK12743 79 GRIDVLVNNAGA 90 (256)
T ss_pred CCCCEEEECCCC
Confidence 47999999753
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.071 Score=63.13 Aligned_cols=78 Identities=18% Similarity=0.266 Sum_probs=57.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.+++|+||| +|.||+.++..|.+. +++|++.||+.. +...++++++|+||.|+|
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~-G~~V~~~d~~~~------------------------~~~~~~~~~aDlVilavP 151 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLS-GYQVRILEQDDW------------------------DRAEDILADAGMVIVSVP 151 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHC-CCeEEEeCCCcc------------------------hhHHHHHhcCCEEEEeCc
Confidence 468999999 999999999999986 478999998520 123455678999999999
Q ss_pred CcccHHHHHHH--HHcCCeEEEccCC
Q psy12817 643 YNLHHHVAEFC--IQHGKNLVTASYL 666 (1201)
Q Consensus 643 ~~~h~~Vakac--IeaGkh~VD~Syv 666 (1201)
......+++.. +..|+-++|.+-+
T Consensus 152 ~~~~~~~~~~l~~l~~~~iv~Dv~Sv 177 (374)
T PRK11199 152 IHLTEEVIARLPPLPEDCILVDLTSV 177 (374)
T ss_pred HHHHHHHHHHHhCCCCCcEEEECCCc
Confidence 76555544432 2445667777544
|
|
| >cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.055 Score=65.08 Aligned_cols=89 Identities=17% Similarity=0.136 Sum_probs=57.6
Q ss_pred CeEEEEcCchhHHHHHH--HHH---hCCCCeEEEEeCCHHHHHHHHHHcC----Ce-eEEEeecCCCCchHHHhhccCCc
Q psy12817 566 RNVLLLGAGYVSRPLIE--YLH---RDENIHITLGSLLKEDIDKVTNEFG----RV-EATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~--~La---~~~~~~VtVadR~~ekAe~La~~~~----~v-~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
+||.|||+|.+|...+- .++ ...+.+|++.|+++++++....... .. ....+.++. ++.+.++++|
T Consensus 1 ~KIaIIGaGs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~~tt----D~~eal~~AD 76 (423)
T cd05297 1 IKIAFIGAGSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIEATT----DRREALDGAD 76 (423)
T ss_pred CeEEEECCChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEEEeC----CHHHHhcCCC
Confidence 48999999999987443 454 3445689999999998876554321 11 012233332 5778889999
Q ss_pred EEEEcCCCcccHHHHH---HHHHcCC
Q psy12817 636 LVVSLLPYNLHHHVAE---FCIQHGK 658 (1201)
Q Consensus 636 VVIs~lP~~~h~~Vak---acIeaGk 658 (1201)
+||+++|...+....+ .+++.|.
T Consensus 77 ~Vi~ai~~~~~~~~~~de~i~~K~g~ 102 (423)
T cd05297 77 FVINTIQVGGHEYTETDFEIPEKYGY 102 (423)
T ss_pred EEEEeeEecCccchhhhhhhHHHcCe
Confidence 9999998654433333 3444444
|
linked to 3D####ucture |
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.05 Score=58.94 Aligned_cols=73 Identities=16% Similarity=0.269 Sum_probs=55.6
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHcC------CeeEEEeecCCCCchHHHhhcc------
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEFG------RVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~~------~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+|+|.| +|.+|+.+++.|+++ +.+|++.+|+ .++++++.+.+. .+..+..|+.| .+.+.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ-GAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD--EAQWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 489999 799999999999986 5799999998 666666654431 12346789998 777766654
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 78 ~~id~vi~~ag 88 (251)
T PRK07069 78 GGLSVLVNNAG 88 (251)
T ss_pred CCccEEEECCC
Confidence 4699999974
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.14 Score=63.02 Aligned_cols=100 Identities=14% Similarity=0.138 Sum_probs=67.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-----------ch------
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-----------SD------ 625 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-----------~e------ 625 (1201)
....||+|+|+|.+|..++..+...+ .+|++.|+++++.+.. +.+ +.+.+.+|..+.+ .+
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lG-A~V~a~D~~~~rle~a-esl-GA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLG-AIVRAFDTRPEVAEQV-ESM-GAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHH-HHc-CCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 34689999999999999999888775 4899999999987754 445 5665555442200 01
Q ss_pred -HHHhhccCCcEEEEcCCC--cccH----HHHHHHHHcCCeEEEccC
Q psy12817 626 -NLSGLVRSADLVVSLLPY--NLHH----HVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 626 -~L~elI~~~DVVIs~lP~--~~h~----~VakacIeaGkh~VD~Sy 665 (1201)
.+.+.++++|+||+|+.. .-++ +-+-.+++.|-.++|.+.
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~ 286 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAA 286 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEcc
Confidence 112334679999999843 2223 233445567777888764
|
|
| >TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.24 E-value=1.4 Score=54.69 Aligned_cols=100 Identities=13% Similarity=0.100 Sum_probs=70.3
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.++.|+|.|+.|+...+.++.+|+ .+.+|+..... +... ..|. .+.
T Consensus 135 ~l~gktvgIiG~G~IG~~vA~~l~~fG~----------------~V~~~d~~~~~-~~~~-~~g~------------~~~ 184 (525)
T TIGR01327 135 ELYGKTLGVIGLGRIGSIVAKRAKAFGM----------------KVLAYDPYISP-ERAE-QLGV------------ELV 184 (525)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCC----------------EEEEECCCCCh-hHHH-hcCC------------EEc
Confidence 3556899999999999999999999984 34555532211 1111 1121 111
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCe
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSI 343 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsi 343 (1201)
..+ +++++.+|+|+.+.-..+.+-.+|..+.++. |||| ++++++| .|+-+
T Consensus 185 ~~l-~ell~~aDvV~l~lPlt~~T~~li~~~~l~~-mk~g------------------a~lIN~a--RG~~v 234 (525)
T TIGR01327 185 DDL-DELLARADFITVHTPLTPETRGLIGAEELAK-MKKG------------------VIIVNCA--RGGII 234 (525)
T ss_pred CCH-HHHHhhCCEEEEccCCChhhccCcCHHHHhc-CCCC------------------eEEEEcC--CCcee
Confidence 112 3567889999999998888888999999998 9999 8898876 45533
|
This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli. |
| >PLN02358 glyceraldehyde-3-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.1 Score=61.18 Aligned_cols=101 Identities=14% Similarity=0.165 Sum_probs=64.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEE-EeCC--HHHHHHHHH------HcCC--eeE-----EEee-----cCC-C
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITL-GSLL--KEDIDKVTN------EFGR--VEA-----TLID-----VNN-G 622 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtV-adR~--~ekAe~La~------~~~~--v~~-----v~lD-----V~D-~ 622 (1201)
+.||+|+|+|++|+.+++.+.+.++++++. .|.+ .+...-|.+ .+++ ++. +.++ +.. .
T Consensus 5 ~lrVaI~G~GrIGr~~~r~~~~~~~velvaI~D~~~~~~~~a~ll~yDs~~g~~~~~~v~~~~g~~l~~~g~~i~v~~~~ 84 (338)
T PLN02358 5 KIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGIR 84 (338)
T ss_pred ceEEEEEeecHHHHHHHHHHhhCCCcEEEEEeCCCCCHHHHHHhheeecCCCCcCCCeEEECCCCEEEECCEEEEEEEcC
Confidence 579999999999999999988878888554 5543 333222221 1121 111 1100 111 0
Q ss_pred CchHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 623 GSDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 623 ~~e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+++.+.=--.++|+|+.|++.....+.+...+++|+..|+.|-
T Consensus 85 ~p~~~~w~~~gvDiVie~tG~~~s~~~a~~hl~aGak~ViiSa 127 (338)
T PLN02358 85 NPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISA 127 (338)
T ss_pred CcccCcccccCCCEEEEcccchhhHHHHHHHHHCCCEEEEeCC
Confidence 0222210013799999999988889999999999999999873
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.05 Score=60.24 Aligned_cols=77 Identities=14% Similarity=0.286 Sum_probs=56.1
Q ss_pred CCCeEEEEcC---chhHHHHHHHHHhCCCCeEEEEeC------CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--
Q psy12817 564 ESRNVLLLGA---GYVSRPLIEYLHRDENIHITLGSL------LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 564 ~mkKVLILGA---G~VG~~va~~La~~~~~~VtVadR------~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
+.|.++|.|+ +.+|+.+++.|++. +.+|++..| ..+.++++.+....+.++.+|++| .++++++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~ 81 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAA-GAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD--DAQIEETFETI 81 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC--HHHHHHHHHHH
Confidence 4578999996 48999999999986 568877754 334455554433345678899998 777776653
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 82 ~~~~g~iD~lv~nag~ 97 (258)
T PRK07370 82 KQKWGKLDILVHCLAF 97 (258)
T ss_pred HHHcCCCCEEEEcccc
Confidence 47999999853
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.053 Score=65.27 Aligned_cols=82 Identities=13% Similarity=0.288 Sum_probs=58.1
Q ss_pred CCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccch
Q psy12817 194 GPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSL 273 (1201)
Q Consensus 194 ~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~ 273 (1201)
.-.+|+|+|.|.+|++.+..|+.+| ++|.+++....+..... ..| |... +
T Consensus 211 ~Gk~VlViG~G~IG~~vA~~lr~~G----------------a~ViV~d~dp~ra~~A~-~~G--~~v~----------~- 260 (425)
T PRK05476 211 AGKVVVVAGYGDVGKGCAQRLRGLG----------------ARVIVTEVDPICALQAA-MDG--FRVM----------T- 260 (425)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC----------------CEEEEEcCCchhhHHHH-hcC--CEec----------C-
Confidence 3468999999999999999999999 45667766544432222 123 2211 0
Q ss_pred hhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 274 FASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 274 f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
. ++.++.+|++|+|. ..+.+|+.++++. ||+|
T Consensus 261 l-~eal~~aDVVI~aT----G~~~vI~~~~~~~-mK~G 292 (425)
T PRK05476 261 M-EEAAELGDIFVTAT----GNKDVITAEHMEA-MKDG 292 (425)
T ss_pred H-HHHHhCCCEEEECC----CCHHHHHHHHHhc-CCCC
Confidence 1 23466899999986 4567899999999 9999
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1201 | ||||
| 1ff9_A | 450 | Apo Saccharopine Reductase Length = 450 | 1e-65 | ||
| 1ff9_A | 450 | Apo Saccharopine Reductase Length = 450 | 4e-11 | ||
| 2axq_A | 467 | Apo Histidine-Tagged Saccharopine Dehydrogenase (L- | 2e-61 | ||
| 2axq_A | 467 | Apo Histidine-Tagged Saccharopine Dehydrogenase (L- | 1e-10 | ||
| 2q99_A | 381 | Crystal Structure Of Saccharopine Dehydrogenase Fro | 5e-18 | ||
| 2qrj_A | 394 | Crystal Structure Of Sulfate-Bound Saccharopine Deh | 6e-18 | ||
| 3ugk_A | 373 | Crystal Structure Of C205s Mutant And Saccharopine | 7e-18 | ||
| 3abi_A | 365 | Crystal Structure Of L-Lysine Dehydrogenase From Hy | 4e-16 |
| >pdb|1FF9|A Chain A, Apo Saccharopine Reductase Length = 450 | Back alignment and structure |
|
| >pdb|1FF9|A Chain A, Apo Saccharopine Reductase Length = 450 | Back alignment and structure |
|
| >pdb|2AXQ|A Chain A, Apo Histidine-Tagged Saccharopine Dehydrogenase (L-Glu Forming) From Saccharomyces Cerevisiae Length = 467 | Back alignment and structure |
|
| >pdb|2AXQ|A Chain A, Apo Histidine-Tagged Saccharopine Dehydrogenase (L-Glu Forming) From Saccharomyces Cerevisiae Length = 467 | Back alignment and structure |
|
| >pdb|2Q99|A Chain A, Crystal Structure Of Saccharopine Dehydrogenase From Saccharomyces Cerevisiae Length = 381 | Back alignment and structure |
|
| >pdb|2QRJ|A Chain A, Crystal Structure Of Sulfate-Bound Saccharopine Dehydrogenase (L-Lys Forming) From Saccharomyces Cerevisiae Length = 394 | Back alignment and structure |
|
| >pdb|3UGK|A Chain A, Crystal Structure Of C205s Mutant And Saccharopine Dehydrogenase From Saccharomyces Cerevisiae. Length = 373 | Back alignment and structure |
|
| >pdb|3ABI|A Chain A, Crystal Structure Of L-Lysine Dehydrogenase From Hyperthermophilic Archaeon Pyrococcus Horikoshii Length = 365 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1201 | |||
| 2qrj_A | 394 | Saccharopine dehydrogenase, NAD+, L-lysine- formin | 4e-82 | |
| 2qrj_A | 394 | Saccharopine dehydrogenase, NAD+, L-lysine- formin | 3e-16 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 4e-80 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 4e-22 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 6e-08 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 1e-76 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 1e-17 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 3e-05 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 6e-66 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 1e-05 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 1e-05 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 7e-16 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 5e-07 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 1e-06 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 1e-06 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 4e-06 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 6e-04 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 8e-04 |
| >2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* Length = 394 | Back alignment and structure |
|---|
Score = 273 bits (698), Expect = 4e-82
Identities = 94/423 (22%), Positives = 151/423 (35%), Gaps = 81/423 (19%)
Query: 4 VIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDIS 63
+ +R E E RAAL P+ VK+L+ G K+ V+ S + + + Y AGAII S
Sbjct: 26 TLHLRAE-TKPLEARAALTPTTVKKLIAKGFKIYVEDSPQSTFNINEYRQAGAIIVPAGS 84
Query: 64 E-----ASIIFGVKQVPVDLLLP-NKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEK 117
II G+K++P P + F+H K Q +L ++ + L D E
Sbjct: 85 WKTAPRDRIIIGLKEMPETDTFPLVHEHIQFAHCYKDQAGWQNVLMRFIKGHGTLYDLEF 144
Query: 118 LVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAI 177
L +D+G RV AFG YAG AG + + H+ + Y N + +
Sbjct: 145 LENDQGRRVAAFGFYAGFAGAALGVRDWAFK----QTHSDDEDLPAVSPYPN---EKALV 197
Query: 178 RDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNT 237
+D + + P ++ G GA ++ ++
Sbjct: 198 KDVTKDYKEALATGARKPTVLIIGALGRCGSGAIDLLHKV-------------------- 237
Query: 238 KIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPK 297
I + + + E +GG +D P A I IN IY +
Sbjct: 238 GIPDANILKWDIKETSRGGPFDE------------------IPQADIFINCIYLSKPIAP 279
Query: 298 LLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGG---SIEFMNECTTIDT 354
+ N R + D+SAD I T +
Sbjct: 280 FTNMEKLNNPNRRL------------------RTVVDVSADTTNPHNPIPIYTVATVFNK 321
Query: 355 PFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKP 414
P L + GP + V SID++P+ LP EA++FF + + P + Q +
Sbjct: 322 PTVLVP--------TTAGPKLSVISIDHLPSLLPREASEFFSHDLLPSLELLPQRKTAPV 373
Query: 415 IEE 417
Sbjct: 374 WVR 376
|
| >2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* Length = 394 | Back alignment and structure |
|---|
Score = 81.6 bits (201), Expect = 3e-16
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Query: 915 NIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYR 974
+ L D E L +D+G RV AFG YAG AG + + H+ + Y
Sbjct: 136 HGTLYDLEFLENDQGRRVAAFGFYAGFAGAALGVRDWAFK----QTHSDDEDLPAVSPYP 191
Query: 975 NSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEEL 1028
N + ++D + + P ++ G GA ++ ++ +
Sbjct: 192 N---EKALVKDVTKDYKEALATGARKPTVLIIGALGRCGSGAIDLLHKVGIPDA 242
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467 | Back alignment and structure |
|---|
Score = 270 bits (690), Expect = 4e-80
Identities = 134/372 (36%), Positives = 208/372 (55%), Gaps = 15/372 (4%)
Query: 547 LRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVT 606
S + + +NVLLLG+G+V++P+I+ L +++I++T+ + +
Sbjct: 6 HHHHHHHSSGHIEGRHM-GKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALA 64
Query: 607 NEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYL 666
+A +DV + L ++ D+V+SL+PY H +V + I+ ++VT+SY+
Sbjct: 65 K-PSGSKAISLDVTD--DSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYI 121
Query: 667 SPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAP 726
SP + L AGITV+NE+GLDPGIDHL A++ ID H GGK++SF+SYCGGLPAP
Sbjct: 122 SPALRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEVHRAGGKLKSFLSYCGGLPAP 181
Query: 727 ECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEG 786
E S+NPL YKFSWS RGVLL +SAKY ++ ++ + + +LM TA+P PG++F
Sbjct: 182 EDSDNPLGYKFSWSSRGVLLALRNSAKYWKDGKIETVSS-EDLMATAKPYFIYPGYAFVC 240
Query: 787 FANRDSLRYAQLYNIAAEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEI 846
+ NRDS + LY+I EA TV+RGTLRY+GF + ++A+ +G+L + I
Sbjct: 241 YPNRDSTLFKDLYHI-PEAETVIRGTLRYQGFPEFVKALVDMGMLKDDANEIF---SKPI 296
Query: 847 CWRELVCTLLGLSTSD-----IFYENLKNIVADKVGNTGLEALEALGLLNDDIIVQKQNT 901
W E + LG ++ ++ D+ L LGL +D I +
Sbjct: 297 AWNEALKQYLGAKSTSKEDLIASIDSKATWKDDEDRERILSGFAWLGLFSDAKIT-PRGN 355
Query: 902 PIDTLSHFLRQK 913
+DTL L +
Sbjct: 356 ALDTLCARLEEL 367
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467 | Back alignment and structure |
|---|
Score = 100 bits (249), Expect = 4e-22
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 1021 QELPYEELVCTLLGLSTSD-----IFYENLKNIVADKVGNTGLEALEALGLLNDDIIVQK 1075
+ + + E + LG ++ ++ D+ L LGL +D I
Sbjct: 294 KPIAWNEALKQYLGAKSTSKEDLIASIDSKATWKDDEDRERILSGFAWLGLFSDAKIT-P 352
Query: 1076 QNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWPNRSRERKSISLVVYGQPNGTTAM 1135
+ +DTL L + + +D +RD++VL+H I W + + E ++ +LV YG+ G ++M
Sbjct: 353 RGNALDTLCARLEELMQYEDNERDMVVLQHKFGIEWADGTTETRTSTLVDYGKVGGYSSM 412
Query: 1136 AKTVGLPAAIAAKMILEGEF 1155
A TVG P AIA K +L+G
Sbjct: 413 AATVGYPVAIATKFVLDGTI 432
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 6e-08
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 445 LRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKED---ID 501
S + + +NVLLLG+G+V++P+I+ L +++I++T+ + +
Sbjct: 6 HHHHHHHSSGHIEGRHM-GKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALA 64
Query: 502 KDKFISFVQSDASKP 516
K + D +
Sbjct: 65 KPSGSKAISLDVTDD 79
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450 | Back alignment and structure |
|---|
Score = 260 bits (664), Expect = 1e-76
Identities = 140/366 (38%), Positives = 211/366 (57%), Gaps = 14/366 (3%)
Query: 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGS 624
+++VL+LG+G+V+RP ++ L D I +T+ E K++ +DVN+
Sbjct: 3 TKSVLMLGSGFVTRPTLDVLT-DSGIKVTVACRTLESAKKLSAGVQHSTPISLDVND--D 59
Query: 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITV 684
L V DLV+SL+PY H V + I+ K++VT SY+SP MM L + A AGITV
Sbjct: 60 AALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITV 119
Query: 685 LNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGV 744
+NE+GLDPGIDHL A++ I+ H GGK+++F+SYCGGLPAPE S+NPL YKFSWS RGV
Sbjct: 120 MNEIGLDPGIDHLYAIKTIEEVHAAGGKIKTFLSYCGGLPAPESSDNPLGYKFSWSSRGV 179
Query: 745 LLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIAAE 804
LL ++A + ++ +V ++ G ELM TA+P PGF+F + NRDS Y + Y I E
Sbjct: 180 LLALRNAASFYKDGKVTNVA-GPELMATAKPYFIYPGFAFVAYPNRDSTPYKERYQI-PE 237
Query: 805 AHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTSD-- 862
A +VRGTLRY+GF ++ + +G L +E P L I W+E ++ S++
Sbjct: 238 ADNIVRGTLRYQGFPQFIKVLVDIGFLSDEEQPFL---KEAIPWKEATQKIVKASSASEQ 294
Query: 863 -IFYENLKNIVADKVGNTG--LEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLV 919
I + N + + L+ LG+ +D I + +DTL L +K+
Sbjct: 295 DIVSTIVSNATFESTEEQKRIVAGLKWLGIFSDKKIT-PRGNALDTLCATLEEKMQFEEG 353
Query: 920 DYEKLV 925
+ + ++
Sbjct: 354 ERDLVM 359
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450 | Back alignment and structure |
|---|
Score = 86.1 bits (212), Expect = 1e-17
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 1021 QELPYEELVCTLLGLSTSD---IFYENLKNIVADKVGNTG--LEALEALGLLNDDIIVQK 1075
+ +P++E ++ S++ I + N + + L+ LG+ +D I
Sbjct: 274 EAIPWKEATQKIVKASSASEQDIVSTIVSNATFESTEEQKRIVAGLKWLGIFSDKKIT-P 332
Query: 1076 QNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWPNRSRERKSISLVVYGQP---NGT 1132
+ +DTL L +K+ ++G+RD+++L+H +I + SRE ++ SL YG P G
Sbjct: 333 RGNALDTLCATLEEKMQFEEGERDLVMLQHKFEIENKDGSRETRTSSLCEYGAPIGSGGY 392
Query: 1133 TAMAKTVGLPAAIAAKMILEGEF 1155
+AMAK VG+P A+A K +L+G
Sbjct: 393 SAMAKLVGVPCAVAVKFVLDGTI 415
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 3e-05
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 463 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSL----LKEDIDKDKFISFVQSDASKP 516
+++VL+LG+G+V+RP ++ L D I +T+ K+ + + + D +
Sbjct: 3 TKSVLMLGSGFVTRPTLDVLT-DSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDD 59
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 7e-16
Identities = 20/118 (16%), Positives = 44/118 (37%), Gaps = 7/118 (5%)
Query: 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGS 624
N+ ++GAG + + + L N +T+ + + V +D +
Sbjct: 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRM--GVATKQVDAKD--E 60
Query: 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAAS 679
L+ + D V+S P+ L +A+ G + + + + AL E + +
Sbjct: 61 AGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTEDVAATNAVRALVEDSQT 118
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-06
Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 2/80 (2%)
Query: 463 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDK--DKFISFVQSDASKPIEEH 520
N+ ++GAG + + + L N +T+ + ++ Q DA
Sbjct: 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLA 64
Query: 521 NFSPAVQAAIIASNGELTPK 540
A I A+ LTP
Sbjct: 65 KALGGFDAVISAAPFFLTPI 84
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 72.6 bits (177), Expect = 7e-13
Identities = 93/765 (12%), Positives = 208/765 (27%), Gaps = 273/765 (35%)
Query: 431 SNGELTPKF--KYIEDLRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEYLHRDENI 488
++ F ++++ + V+ K+ + EE ++++
Sbjct: 17 QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSK------------DAVSGT 64
Query: 489 HITLGSLLK----------EDIDKDKFISFVQSDASKPIEEHNFSPAV-------QAAII 531
+LL E++ + + F+ S PI+ P++ Q +
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINY-KFLMS----PIKTEQRQPSMMTRMYIEQRDRL 119
Query: 532 ASNGELTPKFKYIEDLRQQSVKSRHKADIQTEESRNVLL---LGAG------YVSRPLIE 582
++ ++ K+ + R Q +A ++ ++NVL+ LG+G V
Sbjct: 120 YNDNQVFAKY-NVS--RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176
Query: 583 YLHRDENIH-ITLGSLLKED--IDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639
D I + L + + ++ + +++ ++ S+
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN-------------- 222
Query: 640 LLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLA 699
+ +H AE + L+ +E + VL V +
Sbjct: 223 -IKLRIHSIQAEL-----RRLL--------KSKPYENC----LLVLLNVQ-NA------- 256
Query: 700 MECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQ 759
+ +A N C +LL T + Q
Sbjct: 257 -KAWNA--FNLS----------------CK--------------ILLTT-------RFKQ 276
Query: 760 VVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLR-YAQLYNIAAEAHTVVRGTLRYRGF 818
V D + T LD + + + +
Sbjct: 277 VTDFLSAAT--TTHISLDHHS----MTLTPDEVKSLLLKYLDCRPQ-------------- 316
Query: 819 VDAMQAIQKLGLLDL-KEHPALHPSGPEICWRELVCTLLGLSTSDIF--YENLKNIVADK 875
DL +E +P +++ S D ++N K++ DK
Sbjct: 317 -------------DLPREVLTTNP---------RRLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 876 VGNT---GLEALE---------ALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVDYEK 923
+ L LE L + + P LS L+ ++
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSA-----HIPTILLS----------LIWFDV 399
Query: 924 LVDDEGNRVVAFGKYAGVAGMVNI--------LHGLGLRLLALGHHTPFMHIGPAHNYRN 975
+ D V KY +V + + L L + +H
Sbjct: 400 IKSDVMVVVNKLHKY----SLVEKQPKESTISIPSIYLELKVKLENEYALH--------- 446
Query: 976 SMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEELVCTLLGL 1035
++I D Y I + P + Q + + + L +
Sbjct: 447 -----RSIVDH-YNIPKTFDSDDLIPPYL-----------DQYFYSHIGHH-----LKNI 484
Query: 1036 STSDIF------YENLKNIVADKVGNTGLEALEALGLLNDDI---------IVQKQNTP- 1079
+ + + + K+ + A A G + + + I
Sbjct: 485 EHPERMTLFRMVFLDF-RFLEQKIRHDST-AWNASGSILNTLQQLKFYKPYICDNDPKYE 542
Query: 1080 --IDTLSHFLRQ---KLVLDDGDRDV--IVLRHDIDILWPNRSRE 1117
++ + FL + L+ D+ I L + + ++ ++
Sbjct: 543 RLVNAILDFLPKIEENLICSK-YTDLLRIALMAEDEAIFEEAHKQ 586
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.8 bits (149), Expect = 1e-09
Identities = 97/692 (14%), Positives = 176/692 (25%), Gaps = 227/692 (32%)
Query: 57 IIQE--DISEASIIFGVKQVPVDLLL--PNKTYCMFSHTIKAQETNMP-LLDAI----LQ 107
II +S +F LL + F N L+ I Q
Sbjct: 54 IIMSKDAVSGTLRLF-------WTLLSKQEEMVQKFVEE--VLRINYKFLMSPIKTEQRQ 104
Query: 108 KNIRLVDYEKLVDDEGNRVVAFGKY---------------------AGVAGMVNILHGLG 146
++ Y + D N F KY V ++ G+
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV-----LIDGVL 159
Query: 147 LRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNV 206
G G + +A + M I L + N
Sbjct: 160 ------G-------SG------KTWVALDVCLSYKVQC---KMDFKIFWLNL-----KNC 192
Query: 207 SQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNEN 266
+ + EMLQK+ N+ R +
Sbjct: 193 NSPETVL-----------EMLQKL-----------LYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 267 PSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLP 326
+ R L SK LL L + +N
Sbjct: 231 QAELRRLLKSKPYENC---------------LLVLLNVQN-------AKA---------- 258
Query: 327 HRLLGICDISADPGGSIEFMNEC----TTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDN 382
+A F C TT + D S T + +
Sbjct: 259 --------WNA-------FNLSCKILLTTRFK--QVTDFLSAATTTH-------ISLDHH 294
Query: 383 MPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKFKYI 442
T P E LD D P E +P + I S + +
Sbjct: 295 SMTLTPDEVKSLLLK-----YLDCRPQDL--PREVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 443 EDLRQQSVKSRHKADIQTEESRNVLLLGAGYVSRPLIEYLHR-DENIHITLG--SLLKED 499
+ + + + ++ + E R + + L + HI SL+ D
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEY---------RKMFDRLSVFPPSAHIPTILLSLIWFD 398
Query: 500 IDKDKFISFVQSDASKP-IEEHNFSPAVQAAIIASNGELTPKFKYIEDLRQQSVKSRHKA 558
+ K + V +E+ + I + ++ + K
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKESTI----------------SIPSI---YLELKVKL 439
Query: 559 DIQTEESRNVL---LLGAGYVSRPLIEYLHRDENIHITLGS-LLKEDIDKVTNEFGRV-- 612
+ + R+++ + + S LI + D+ + +G L + + F V
Sbjct: 440 ENEYALHRSIVDHYNIPKTFDSDDLIP-PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498
Query: 613 -----EATLIDVNNGGSDNLSGLVRSADLVVSLLPYNLH---HH---------VAEFCIQ 655
E + ++ + N SG + + + L Y + + + +F +
Sbjct: 499 DFRFLEQKIR--HDSTAWNASGSI--LNTLQQLKFYKPYICDNDPKYERLVNAILDFLPK 554
Query: 656 HGKNLVTASY-------LSPEMMALHERAASA 680
+NL+ + Y L E A+ E A
Sbjct: 555 IEENLICSKYTDLLRIALMAEDEAIFEEAHKQ 586
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 1e-06
Identities = 42/362 (11%), Positives = 92/362 (25%), Gaps = 134/362 (37%)
Query: 3 KVIAIR-REDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQED 61
+IA R+ + W+ + + ++ S + V+ +P+ R + +
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL-EPAEYRKM----F--------DR 377
Query: 62 ISEASIIFGVKQVPVDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD 121
+S +F P +P + + + + ++ K L Y LV+
Sbjct: 378 LS----VF-----PPSAHIPTILLSLIWFDVIKSDVMV-----VVNK---LHKY-SLVEK 419
Query: 122 EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAG 181
+ + + + L L + +H ++I D
Sbjct: 420 QPKE----STIS--------IPSIYLELKVKLENEYALH--------------RSIVDH- 452
Query: 182 YEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYA 241
Y I + P + Q + + + H +
Sbjct: 453 YNIPKTFDSDDLIPPYL-----------DQYFYSHIGH-------------H-----LKN 483
Query: 242 CEVRRRNYLERIKGGGYDYQEYNENPSLYRSL-FASKIAPYASIIINGIYWAVGSPKLLT 300
E + ++ F I + W L T
Sbjct: 484 IE---------------HPERMTLFRMVFLDFRFLE-----QKIRHDSTAWNASGSILNT 523
Query: 301 LPDA---KNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTT--IDTP 355
L K + N P RL + I ++F+ + I +
Sbjct: 524 LQQLKFYKPYICDND-----------PKYERL--VNAI-------LDFLPKIEENLICSK 563
Query: 356 FC 357
+
Sbjct: 564 YT 565
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Length = 405 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 5e-07
Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 14/114 (12%)
Query: 5 IAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPS--NRRAYPVQAYANAGAII--QE 60
+ I +E E R A + +VK+L G V+V+ P Q Y AGA +
Sbjct: 28 VFIAKESDPN-EGRVAGSVESVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAA 86
Query: 61 DISEASIIFGVKQVP----VDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNI 110
D A +I V + P + N + A+ +
Sbjct: 87 DAKTADVILKV-RRPSAQEISGYRSGAVVIAIMDPY----GNEEAISAMAGAGL 135
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Length = 381 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 1e-06
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 13/112 (11%)
Query: 5 IAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPS--NRRAYPVQAYANAGAIIQEDI 62
I + RE ERR AL P V++L G++V+V+ + + Y AGA I +
Sbjct: 25 IGVPRESAEG-ERRVALVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDP- 82
Query: 63 SEASIIFGVKQVP----VDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNI 110
A ++ V P + L P F T L + ++
Sbjct: 83 WPADVVVKV-NPPTSDEISQLKPGSVLIGFLAPR----TQPELASRLRIADV 129
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Length = 401 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 1e-06
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 14/114 (12%)
Query: 5 IAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPS--NRRAYPVQAYANAGAII--QE 60
I I RE + E R A P V++L++ G V V+ ++ +A+ AGA I
Sbjct: 10 IGIPRERLTN-ETRVAATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGN 68
Query: 61 DISEASIIFGVKQVP----VDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNI 110
+ ++ II V P + LL P T F N L+ + ++N+
Sbjct: 69 SVWQSEIILKV-NAPLDDEIALLNPGTTLVSFIWPA----QNPELMQKLAERNV 117
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Length = 384 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 4e-06
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 5 IAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPS--NRRAYPVQAYANAGAII---- 58
IAI +E + E R A++P VK+LV G +VIV+ + A AGA I
Sbjct: 3 IAIPKERRPG-EDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTA 61
Query: 59 QEDISEASIIFGVK 72
+ +S+A +++ V+
Sbjct: 62 AQALSQADVVWKVQ 75
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} Length = 480 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 6e-04
Identities = 29/216 (13%), Positives = 64/216 (29%), Gaps = 31/216 (14%)
Query: 565 SRNVLLLGAGYVSRPLIEYLHRDENI---HITLGSLLKEDIDKVTNEFGRVEATLIDVNN 621
++LG G V + L+ + +I +T+ + V ++G
Sbjct: 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTI-IAAEGTKVDVAQQYGVSFKLQQITPQ 71
Query: 622 GGSDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY-----------LSPEM 670
+ + + D ++ + + C Q G + A+ ++
Sbjct: 72 NYLEVIGSTLEENDFLIDVSIGISSLALIILCNQKGALYINAATEPWKEEFVMEKMALNR 131
Query: 671 -------MALHERAASAGITVLNEVGLDPG-IDHLLAMECIDAAHLNGGKVESFVSYCG- 721
+ T L G +PG + H + ++ A NG + +
Sbjct: 132 RTNYSLREEVLRLKDKTQKTALITHGANPGLVSHFIKEALLNIAKDNGLTINRPKNAAEW 191
Query: 722 -------GLPAPECSENPLRYKFSWSPRGVLLNTLS 750
G+ +E + + G +NT S
Sbjct: 192 ANLAMTLGIKVIHVAEQDSQVTYPPKSPGEFVNTWS 227
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A Length = 361 | Back alignment and structure |
|---|
Score = 42.0 bits (100), Expect = 8e-04
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 16 ERRAALAPSNVKRLVRSGVKVIVQPSNRRA-----YPVQAYANAGAII---QEDISEASI 67
E R L+PS+V+ LV +G V ++ +A + Q Y AGA + +D +
Sbjct: 13 EFRVGLSPSSVRTLVEAGHTVFIE---TQAGIGAGFADQDYVQAGAQVVPSAKDAWSREM 69
Query: 68 IFGVK 72
+ VK
Sbjct: 70 VVKVK 74
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1201 | |||
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 100.0 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 100.0 | |
| 2qrj_A | 394 | Saccharopine dehydrogenase, NAD+, L-lysine- formin | 100.0 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 100.0 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 100.0 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 100.0 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 100.0 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 100.0 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 100.0 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 100.0 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 100.0 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 100.0 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 100.0 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 99.8 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 99.59 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 99.45 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.31 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 99.26 | |
| 4had_A | 350 | Probable oxidoreductase protein; structural genomi | 99.23 | |
| 3rc1_A | 350 | Sugar 3-ketoreductase; sugar biosynthesis, TDP bin | 99.22 | |
| 4gqa_A | 412 | NAD binding oxidoreductase; structural genomics, P | 99.2 | |
| 3e9m_A | 330 | Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, | 99.19 | |
| 4h3v_A | 390 | Oxidoreductase domain protein; structural genomics | 99.19 | |
| 3bio_A | 304 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 99.18 | |
| 3mz0_A | 344 | Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; | 99.18 | |
| 4hkt_A | 331 | Inositol 2-dehydrogenase; structural genomics, nys | 99.18 | |
| 2ho3_A | 325 | Oxidoreductase, GFO/IDH/MOCA family; streptococcus | 99.17 | |
| 3m2t_A | 359 | Probable dehydrogenase; PSI, SGXNY, structural gen | 99.17 | |
| 4fb5_A | 393 | Probable oxidoreductase protein; PSI-biology, nysg | 99.17 | |
| 3evn_A | 329 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 99.16 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 99.16 | |
| 3ec7_A | 357 | Putative dehydrogenase; alpha-beta, structural gen | 99.14 | |
| 3ohs_X | 334 | Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d | 99.14 | |
| 1zh8_A | 340 | Oxidoreductase; TM0312, structural genomics, JO ce | 99.14 | |
| 3q2i_A | 354 | Dehydrogenase; rossmann fold, UDP-sugar binding, N | 99.13 | |
| 1ydw_A | 362 | AX110P-like protein; structural genomics, protein | 99.12 | |
| 3ezy_A | 344 | Dehydrogenase; structural genomics, unknown functi | 99.12 | |
| 2glx_A | 332 | 1,5-anhydro-D-fructose reductase; NADP(H) dependen | 99.12 | |
| 3i23_A | 349 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 99.1 | |
| 3moi_A | 387 | Probable dehydrogenase; structural genomics, PSI2, | 99.09 | |
| 1h6d_A | 433 | Precursor form of glucose-fructose oxidoreductase; | 99.09 | |
| 3dty_A | 398 | Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram | 99.09 | |
| 3uuw_A | 308 | Putative oxidoreductase with NAD(P)-binding rossm | 99.09 | |
| 3e18_A | 359 | Oxidoreductase; dehydrogenase, NAD-binding, struct | 99.09 | |
| 3v5n_A | 417 | Oxidoreductase; structural genomics, PSI-biology, | 99.08 | |
| 3e82_A | 364 | Putative oxidoreductase; NAD, GFO/IDH/MOCA family, | 99.07 | |
| 3f4l_A | 345 | Putative oxidoreductase YHHX; structural genomics, | 99.07 | |
| 3kux_A | 352 | Putative oxidoreductase; oxidoreductase family, cs | 99.07 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 99.07 | |
| 3fhl_A | 362 | Putative oxidoreductase; NAD-binding domain, PSI-2 | 99.04 | |
| 2ixa_A | 444 | Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver | 99.03 | |
| 2p2s_A | 336 | Putative oxidoreductase; YP_050235.1, structural g | 99.03 | |
| 1xea_A | 323 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 99.02 | |
| 3o9z_A | 312 | Lipopolysaccaride biosynthesis protein WBPB; oxido | 99.01 | |
| 3gdo_A | 358 | Uncharacterized oxidoreductase YVAA; structural ge | 99.01 | |
| 3oqb_A | 383 | Oxidoreductase; structural genomics, protein struc | 98.99 | |
| 3c1a_A | 315 | Putative oxidoreductase; ZP_00056571.1, oxidoreduc | 98.98 | |
| 3u3x_A | 361 | Oxidoreductase; structural genomics, PSI-biology, | 98.97 | |
| 1tlt_A | 319 | Putative oxidoreductase (virulence factor MVIM HO; | 98.96 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 98.95 | |
| 3oa2_A | 318 | WBPB; oxidoreductase, sugar biosynthesis, dehydrog | 98.95 | |
| 4gmf_A | 372 | Yersiniabactin biosynthetic protein YBTU; rossmann | 98.89 | |
| 3btv_A | 438 | Galactose/lactose metabolism regulatory protein GA | 98.89 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.88 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.87 | |
| 2nvw_A | 479 | Galactose/lactose metabolism regulatory protein GA | 98.87 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 98.86 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 98.82 | |
| 3upl_A | 446 | Oxidoreductase; rossmann fold, NADPH binding; 1.50 | 98.82 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.8 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 98.79 | |
| 2dc1_A | 236 | L-aspartate dehydrogenase; NAD, oxidoreductase; HE | 98.77 | |
| 3ip3_A | 337 | Oxidoreductase, putative; structural genomics, PSI | 98.76 | |
| 1f06_A | 320 | MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH | 98.76 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 98.75 | |
| 2a9f_A | 398 | Putative malic enzyme ((S)-malate:NAD+ oxidoreduct | 98.75 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 98.74 | |
| 4ew6_A | 330 | D-galactose-1-dehydrogenase protein; nysgrc, PSI-b | 98.7 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.68 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.67 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 98.67 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 98.66 | |
| 1lc0_A | 294 | Biliverdin reductase A; oxidoreductase, tetrapyrro | 98.66 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 98.65 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 98.65 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 98.62 | |
| 3do5_A | 327 | HOM, homoserine dehydrogenase; NP_069768.1, putati | 98.56 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.51 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 98.51 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 98.43 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 98.43 | |
| 3mtj_A | 444 | Homoserine dehydrogenase; rossmann-fold, PSI, MCSG | 98.41 | |
| 3ing_A | 325 | Homoserine dehydrogenase; NP_394635.1, structural | 98.41 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 98.33 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.32 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 98.31 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 98.3 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.27 | |
| 2i99_A | 312 | MU-crystallin homolog; thyroid hormine binding pro | 98.27 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.26 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 98.26 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 98.26 | |
| 1x7d_A | 350 | Ornithine cyclodeaminase; binds NAD+, binds L-orni | 98.25 | |
| 1r0k_A | 388 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; N | 98.24 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 98.24 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 98.24 | |
| 3c8m_A | 331 | Homoserine dehydrogenase; structural genomics, APC | 98.24 | |
| 2czc_A | 334 | Glyceraldehyde-3-phosphate dehydrogenase; glycolys | 98.22 | |
| 1ebf_A | 358 | Homoserine dehydrogenase; dinucleotide, NAD, dimer | 98.21 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 98.2 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 98.2 | |
| 2ejw_A | 332 | HDH, homoserine dehydrogenase; NAD-dependent, oxid | 98.19 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 98.19 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 98.17 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 98.17 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 98.16 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 98.16 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 98.15 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 98.14 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 98.14 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 98.14 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.14 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 98.13 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.12 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 98.12 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 98.11 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 98.11 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 98.11 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 98.09 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 98.08 | |
| 1omo_A | 322 | Alanine dehydrogenase; two-domain, beta-sandwich-d | 98.07 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 98.06 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 98.05 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 98.05 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.04 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 98.03 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 98.03 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 98.02 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 98.02 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.02 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 98.02 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.01 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 98.01 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 98.01 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 98.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 97.98 | |
| 2qrj_A | 394 | Saccharopine dehydrogenase, NAD+, L-lysine- formin | 97.98 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.97 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.97 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.96 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 97.96 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 97.95 | |
| 1j5p_A | 253 | Aspartate dehydrogenase; TM1643, structural genomi | 97.94 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.93 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 97.93 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.91 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.9 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 97.89 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 97.89 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 97.89 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 97.89 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.88 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 97.88 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.87 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 97.87 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.87 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 97.86 | |
| 3a06_A | 376 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; M | 97.85 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.84 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 97.84 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 97.84 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 97.83 | |
| 1cf2_P | 337 | Protein (glyceraldehyde-3-phosphate dehydrogenase) | 97.83 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.83 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 97.83 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.82 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 97.81 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 97.78 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.78 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 97.78 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 97.77 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.76 | |
| 1b7g_O | 340 | Protein (glyceraldehyde 3-phosphate dehydrogenase; | 97.76 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.76 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 97.76 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 97.75 | |
| 3hdj_A | 313 | Probable ornithine cyclodeaminase; APC62486, borde | 97.74 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.73 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 97.72 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.71 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.7 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.69 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 97.68 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.67 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 97.67 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.66 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 97.66 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.65 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.65 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 97.64 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.61 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.61 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 97.61 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 97.61 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 97.58 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 97.58 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.58 | |
| 2p4q_A | 497 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.57 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 97.56 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 97.56 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.56 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 97.54 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 97.54 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 97.54 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 97.53 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.51 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 97.51 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 97.5 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 97.5 | |
| 1pgj_A | 478 | 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o | 97.5 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.5 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.5 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.5 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 97.5 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.5 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 97.5 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.48 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 97.48 | |
| 2pgd_A | 482 | 6-phosphogluconate dehydrogenase; oxidoreductase ( | 97.48 | |
| 1u8f_O | 335 | GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l | 97.47 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 97.47 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 97.47 | |
| 2vt3_A | 215 | REX, redox-sensing transcriptional repressor REX; | 97.46 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 97.46 | |
| 2yv2_A | 297 | Succinyl-COA synthetase alpha chain; COA-binding d | 97.46 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 97.46 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 97.44 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 97.44 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 97.44 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 97.44 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 97.44 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 97.42 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 97.42 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.42 | |
| 2i76_A | 276 | Hypothetical protein; NADP, dehydrogenase, TM1727, | 97.42 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 97.42 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 97.41 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 97.41 | |
| 1dlj_A | 402 | UDP-glucose dehydrogenase; rossmann fold, ternary | 97.4 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 97.4 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 97.39 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 97.39 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 97.39 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 97.39 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 97.39 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 97.38 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 97.38 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.38 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.38 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 97.38 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.37 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 97.37 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 97.37 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 97.36 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.36 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 97.36 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 97.34 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 97.34 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 97.34 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 97.33 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 97.33 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 97.33 | |
| 2dt5_A | 211 | AT-rich DNA-binding protein; REX, NADH, NAD, rossm | 97.33 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 97.32 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 97.32 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 97.32 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 97.31 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.31 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 97.31 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 97.3 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 97.3 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 97.3 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 97.3 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 97.29 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 97.29 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.29 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 97.29 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 97.29 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 97.28 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 97.28 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 97.28 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 97.28 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 97.27 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 97.27 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 97.27 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 97.27 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 97.27 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 97.26 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 97.26 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 97.26 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 97.25 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 97.25 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 97.24 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 97.24 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 97.24 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.24 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 97.24 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 97.23 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.23 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 97.23 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 97.23 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 97.22 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 97.22 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 97.21 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 97.21 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 97.21 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 97.2 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 97.2 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 97.2 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 97.19 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 97.19 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.18 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 97.17 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 97.17 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 97.16 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 97.16 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 97.16 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 97.16 | |
| 3e5r_O | 337 | PP38, glyceraldehyde-3-phosphate dehydrogenase, cy | 97.15 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.15 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 97.15 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 97.15 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 97.15 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 97.14 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 97.14 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 97.14 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 97.14 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 97.13 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 97.13 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 97.13 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 97.13 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 97.13 | |
| 1z82_A | 335 | Glycerol-3-phosphate dehydrogenase; TM0378, struct | 97.13 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 97.13 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.12 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 97.12 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.12 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 97.12 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 97.12 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 97.11 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 97.11 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 97.11 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 97.11 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.11 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 97.11 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 97.1 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 97.1 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.1 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 97.1 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 97.09 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 97.09 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 97.09 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 97.08 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 97.08 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.08 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.08 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 97.08 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 97.08 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 97.08 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 97.08 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 97.07 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 97.07 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 97.07 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 97.06 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 97.06 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 97.06 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 97.05 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 97.05 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 97.05 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 97.05 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 97.05 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.05 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 97.04 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 97.04 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 97.04 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 97.04 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 97.03 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 97.03 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 97.03 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 97.02 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 97.01 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 97.01 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 97.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 97.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 97.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 97.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 97.0 | |
| 1yj8_A | 375 | Glycerol-3-phosphate dehydrogenase; SGPP, structur | 97.0 | |
| 2yyy_A | 343 | Glyceraldehyde-3-phosphate dehydrogenase; glyceral | 97.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 97.0 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 96.99 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 96.99 | |
| 2dvm_A | 439 | Malic enzyme, 439AA long hypothetical malate oxido | 96.99 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 96.99 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 96.98 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 96.98 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 96.98 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 96.97 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 96.97 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 96.97 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 96.96 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 96.96 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 96.95 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 96.95 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 96.94 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 96.94 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 96.94 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 96.93 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 96.93 | |
| 1zej_A | 293 | HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural | 96.93 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 96.93 | |
| 3c7a_A | 404 | Octopine dehydrogenase; L) stereospecific opine de | 96.91 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 96.91 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 96.91 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 96.9 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 96.9 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 96.9 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 96.89 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 96.89 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 96.89 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 96.89 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 96.89 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 96.87 | |
| 1x0v_A | 354 | GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase | 96.87 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 96.87 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 96.87 | |
| 1gad_O | 330 | D-glyceraldehyde-3-phosphate dehydrogenase; oxidor | 96.86 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 96.86 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 96.86 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 96.86 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 96.86 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.85 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 96.85 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 96.85 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 96.84 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 96.84 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 96.84 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 96.84 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.84 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 96.84 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 96.84 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 96.83 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 96.83 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 96.82 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 96.82 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 96.82 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 96.81 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 96.81 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 96.8 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 96.8 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 96.78 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.76 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 96.76 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 96.74 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 96.73 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 96.73 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.72 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.7 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 96.7 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 96.7 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 96.68 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 96.67 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 96.67 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 96.67 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.67 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 96.66 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 96.66 | |
| 2fp4_A | 305 | Succinyl-COA ligase [GDP-forming] alpha-chain, mit | 96.65 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 96.64 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.64 | |
| 3ojo_A | 431 | CAP5O; rossmann fold, complex with cofactor NAD an | 96.63 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 96.63 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 96.62 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 96.62 | |
| 2qyt_A | 317 | 2-dehydropantoate 2-reductase; APC81190, porphyrom | 96.62 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 96.62 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 96.62 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 96.61 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 96.6 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 96.59 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 96.59 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 96.57 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 96.57 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 96.56 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 96.56 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 96.55 | |
| 1rm4_O | 337 | Glyceraldehyde 3-phosphate dehydrogenase A; rossma | 96.54 | |
| 2rcy_A | 262 | Pyrroline carboxylate reductase; malaria, structur | 96.54 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 96.54 | |
| 1xdw_A | 331 | NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas | 96.52 |
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-76 Score=695.15 Aligned_cols=418 Identities=39% Similarity=0.689 Sum_probs=381.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.++++|+|+|+|.+|+.++..|++.++.+|++++|+.++++++++. .++..+.+|+.| .+++.++++++|+||||+|
T Consensus 21 l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~~~~~~~~D~~d--~~~l~~~l~~~DvVIn~tp 97 (467)
T 2axq_A 21 HMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-SGSKAISLDVTD--DSALDKVLADNDVVISLIP 97 (467)
T ss_dssp --CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-GTCEEEECCTTC--HHHHHHHHHTSSEEEECSC
T ss_pred CCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-cCCcEEEEecCC--HHHHHHHHcCCCEEEECCc
Confidence 4578999999999999999999998778999999999999998876 367777889987 7789999999999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCC
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGG 722 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGG 722 (1201)
..++..++++|+++|+||+|.+|..+.+..+.+.|+++|+++++++|++||+++++++++++++++.|+++.+|.+|||+
T Consensus 98 ~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~~PG~~~~~a~~li~q~~~~g~~~~s~~~wtG~ 177 (467)
T 2axq_A 98 YTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEVHRAGGKLKSFLSYCGG 177 (467)
T ss_dssp GGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred hhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEEEecCCcCccchHHHHHHHHHHHHhccCcceEEEEEecc
Confidence 98888999999999999999999889999999999999999999999999999999999999998888999999999999
Q ss_pred CCCCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCccccccccccccCCCceEEEeeCCCccchhhhcccc
Q psy12817 723 LPAPECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIA 802 (1201)
Q Consensus 723 LPaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf~pg~~lE~ypNRDSl~Y~~~YgI~ 802 (1201)
.|.|+.++||++|+|+|||++++.++.+++++++||++++++++ +.++...+++|+||+.+|+||||||+.|.+.|+|+
T Consensus 178 ~p~~~~~~~~l~y~fsws~~g~i~~~~~~a~~~~~G~~~~v~~~-~~~~~~~~~~~~~g~~~e~~~~~~~~~~~e~y~i~ 256 (467)
T 2axq_A 178 LPAPEDSDNPLGYKFSWSSRGVLLALRNSAKYWKDGKIETVSSE-DLMATAKPYFIYPGYAFVCYPNRDSTLFKDLYHIP 256 (467)
T ss_dssp EECGGGCCSTTSCCBSSCCHHHHHGGGSCEEEEETTEEEEECTT-THHHHCEECCSSTTCCEEEEECSBCTHHHHHTTCT
T ss_pred cCCcccccccccCcCCCCHHHHHHHhcCCeEEEECCEEEEecCh-hhhccccccccCCCccEEEecCCCcchhhhhhCCC
Confidence 99888899999999999999999999999999999999999997 55566677888899999999999999999999998
Q ss_pred cccccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHHHHHHHHcCCCCCchhHHHHHHHHHhhhcCcchh
Q psy12817 803 AEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTSDIFYENLKNIVADKVGNTGLE 882 (1201)
Q Consensus 803 ~~~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (1201)
+++|+.||||||+||+++|++|++|||++++|++++ +.+++|++|++++||.+.+ ++++|...+..+++++
T Consensus 257 -~~~~~~r~tlR~~g~~~~~~~L~~lGl~~~~~~~~~---~~~i~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~~--- 327 (467)
T 2axq_A 257 -EAETVIRGTLRYQGFPEFVKALVDMGMLKDDANEIF---SKPIAWNEALKQYLGAKST--SKEDLIASIDSKATWK--- 327 (467)
T ss_dssp -TCSEEEEEEEEETTHHHHHHHHHHTTTTCCSBCGGG---SSCCBHHHHHHHHHTCSSS--SHHHHHHHHHTTCCCS---
T ss_pred -CcceeEEEEEEeCCHHHHHHHHHHcCCCCCCccccc---CCCcCHHHHHHHhcCCCcc--cHHHHHHHHHhhhcCC---
Confidence 999999999999999999999999999999999864 3579999999999997553 5677777666555421
Q ss_pred HHHhhccccchhhhcccCCCcchhhhHHHhhhhhhhhcccccccccCcceeecccccccccchhhhccchhhhhhcCCCC
Q psy12817 883 ALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHT 962 (1201)
Q Consensus 883 ~l~~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (1201)
T Consensus 328 -------------------------------------------------------------------------------- 327 (467)
T 2axq_A 328 -------------------------------------------------------------------------------- 327 (467)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCCcccchhhhHHHHhhhcccccccCCCCCCCCCceeeecCCCccccchhhhhhcCchhHHHHhhccCCCchhhh
Q psy12817 963 PFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEELVCTLLGLSTSDIFY 1042 (1201)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1201)
T Consensus 328 -------------------------------------------------------------------------------- 327 (467)
T 2axq_A 328 -------------------------------------------------------------------------------- 327 (467)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhcccchhhHHHHHHHhCCCCCccccCCCCCHHHHHHHHHHhhcCCCCCCccEEEEEeeEEEEeCCCceEEEEEe
Q psy12817 1043 ENLKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWPNRSRERKSIS 1122 (1201)
Q Consensus 1043 ~~l~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~h~~~~~~~~~~~~~~~~~ 1122 (1201)
++.+..+++++|+|||||+++ ++++++||+|+||++|++||+|+++|||||||||+|+|+|+||++++++++
T Consensus 328 -------~~~~~~~~~~~l~~~G~~~~~-~~~~~~~~~d~l~~~l~~~l~~~~~e~D~v~l~~~~~~~~~~g~~~~~~~~ 399 (467)
T 2axq_A 328 -------DDEDRERILSGFAWLGLFSDA-KITPRGNALDTLCARLEELMQYEDNERDMVVLQHKFGIEWADGTTETRTST 399 (467)
T ss_dssp -------CHHHHHHHHHHHHHTTTTSSC-BCCCCSBHHHHHHHHHHHHSBCCTTCCEEEEEEEEEEEECTTSCEEEEEEE
T ss_pred -------chhHHHHHHHHHHhcCCCCCC-ccCCCCCHHHHHHHHHHHhhccCCCCCceEEEEEEEEEEecCCcEEEEEEE
Confidence 011134679999999999987 666789999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCcchhhhccchhHHHHHHHHHcCccceeecc
Q psy12817 1123 LVVYGQPNGTTAMAKTVGLPAAIAAKMILEGEFFVTTST 1161 (1201)
Q Consensus 1123 l~~~g~~~~~~ama~tvg~p~ai~~~~~l~~~~~~~~~~ 1161 (1201)
|++||+++|+||||+|||+|+||||+|||+|+|+.+|++
T Consensus 400 ~~~y~~~~g~sama~tvG~p~ai~a~~i~~g~i~~~Gv~ 438 (467)
T 2axq_A 400 LVDYGKVGGYSSMAATVGYPVAIATKFVLDGTIKGPGLL 438 (467)
T ss_dssp EEEECCTTSCCHHHHHHHHHHHHHHHHHHTTSSCCSEEE
T ss_pred EEEecCCCCceEEehhhchhHHHHHHHHhCCccCCCccc
Confidence 999999999999999999999999999999999999998
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-72 Score=658.18 Aligned_cols=416 Identities=39% Similarity=0.705 Sum_probs=378.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
+++|+|+|+|++|+.+++.|++. +.+|++++|+.++++++++.++++..+.+|+.| .+++.++++++|+||||+|..
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~-G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d--~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAGVQHSTPISLDVND--DAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT-TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTC--HHHHHHHHTTSSEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-cCEEEEEECCHHHHHHHHHhcCCceEEEeecCC--HHHHHHHHcCCcEEEECCccc
Confidence 57999999999999999999975 578999999999999988777667788899998 788999999999999999998
Q ss_pred ccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecCCCC
Q psy12817 645 LHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLP 724 (1201)
Q Consensus 645 ~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cGGLP 724 (1201)
+|..++++|+++|+|++|.++..+....+.+.|+++|+.+++++|++||++|+++++++++.++.|+++.+|.+|||+.|
T Consensus 80 ~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g~g~~pg~~~~~a~~li~q~~~~gg~i~~~~~~~G~~p 159 (450)
T 1ff9_A 80 FHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEVHAAGGKIKTFLSYCGGLP 159 (450)
T ss_dssp CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEECSCBBTTBHHHHHHHHHHHHHHHTTCEEEEEEEEEEEEE
T ss_pred cchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEEeCCCCcCchHHHHHHHHHHHhcccCCeeeEEEEEEcccC
Confidence 89999999999999999999988889999999999999999999999999999999999999778889999999999998
Q ss_pred CCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCccccccccccccCCCceEEEeeCCCccchhhhcccccc
Q psy12817 725 APECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIAAE 804 (1201)
Q Consensus 725 aPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf~pg~~lE~ypNRDSl~Y~~~YgI~~~ 804 (1201)
.++++++||+|+|+||+++++.++.+++++++||++++|++. ++++..++++|+||+++|+||||||+.|.+.|+|+ +
T Consensus 160 ~~~~~~~~l~~~~~~s~~g~l~~~~~~~~~~~~G~~~~v~~~-~~~~~~~~~~~~~g~~~e~~~~~~s~~~~~~~~~~-~ 237 (450)
T 1ff9_A 160 APESSDNPLGYKFSWSSRGVLLALRNAASFYKDGKVTNVAGP-ELMATAKPYFIYPGFAFVAYPNRDSTPYKERYQIP-E 237 (450)
T ss_dssp CGGGCCSTTSCCCSSCHHHHHHHTTSCEEEEETTEEEEECTH-HHHHTCEECCSSTTCCEEEEECSBCTTHHHHTTCT-T
T ss_pred ccccCCccccceeccChHHHHHHhhChhheEeCCeEEEEeCc-chhccceeeecCCCceEEEeccCCcchhHhhcCCC-C
Confidence 777889999999999999999999999999999999999986 66677788998899999999999999999999997 9
Q ss_pred cccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHHHHHHHHcCCCCCchhHHHHHHHHHhhhcCcchhHH
Q psy12817 805 AHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTSDIFYENLKNIVADKVGNTGLEAL 884 (1201)
Q Consensus 805 ~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~l 884 (1201)
++|+.||||||+||+++|++|++|||++++|++++ +.+++|++|++++||.+.+ ++++|...+.++++++
T Consensus 238 ~~~l~r~tlR~~g~~~~~~~l~~lGl~~~~~~~~~---~~~~~~~~~~~~~l~~~~~--~~~~l~~~~~~~~~~~----- 307 (450)
T 1ff9_A 238 ADNIVRGTLRYQGFPQFIKVLVDIGFLSDEEQPFL---KEAIPWKEATQKIVKASSA--SEQDIVSTIVSNATFE----- 307 (450)
T ss_dssp CSEEEEEEEEETTHHHHHHHHHHTTTTCCCBCGGG---SSCCBHHHHHHHHHTCSSS--SHHHHHHHHHHHSCCS-----
T ss_pred cceEEEeeEeccCHHHHHHHHHHcCCCCCCccccc---cCCCCHHHHHHHHhCCCCC--cHHHHHHHHHHhccCC-----
Confidence 99999999999999999999999999999999864 3579999999999997554 5677777666655431
Q ss_pred HhhccccchhhhcccCCCcchhhhHHHhhhhhhhhcccccccccCcceeecccccccccchhhhccchhhhhhcCCCCCc
Q psy12817 885 EALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPF 964 (1201)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 964 (1201)
T Consensus 308 -------------------------------------------------------------------------------- 307 (450)
T 1ff9_A 308 -------------------------------------------------------------------------------- 307 (450)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCcccchhhhHHHHhhhcccccccCCCCCCCCCceeeecCCCccccchhhhhhcCchhHHHHhhccCCCchhhhhh
Q psy12817 965 MHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEELVCTLLGLSTSDIFYEN 1044 (1201)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1201)
T Consensus 308 -------------------------------------------------------------------------------- 307 (450)
T 1ff9_A 308 -------------------------------------------------------------------------------- 307 (450)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhcccchhhHHHHHHHhCCCCCccccCCCCCHHHHHHHHHHhhcCCCCCCccEEEEEeeEEEEeCCCceEEEEEeEE
Q psy12817 1045 LKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWPNRSRERKSISLV 1124 (1201)
Q Consensus 1045 l~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~h~~~~~~~~~~~~~~~~~l~ 1124 (1201)
++.+..+++++++|||||+++ ++++++||+|+||++|++||+|.++|||||+|||+|+|.|+||++++++++|+
T Consensus 308 -----~~~~~~~~~~~~~~~g~~~~~-~~~~~~~p~~~l~~~l~~~~~~~~~e~d~v~l~~~~~~~~~~g~~~~~~~~~~ 381 (450)
T 1ff9_A 308 -----STEEQKRIVAGLKWLGIFSDK-KITPRGNALDTLCATLEEKMQFEEGERDLVMLQHKFEIENKDGSRETRTSSLC 381 (450)
T ss_dssp -----CHHHHHHHHHHHHHHTTTSSC-BCCCCSBHHHHHHHHHHHHSSCCTTCCEEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred -----chHHHHHHHHHHHhhccCCcc-cccCCCCHHHHHHHHhhHhhccCCCCCceEEEEEEEEEEecCCCEEEEEEEEE
Confidence 001134679999999999977 66678999999999999999999999999999999999999999999999999
Q ss_pred EEcCC---CCcchhhhccchhHHHHHHHHHcCccceeecc
Q psy12817 1125 VYGQP---NGTTAMAKTVGLPAAIAAKMILEGEFFVTTST 1161 (1201)
Q Consensus 1125 ~~g~~---~~~~ama~tvg~p~ai~~~~~l~~~~~~~~~~ 1161 (1201)
.||++ +|+||||+|||+|+||||+|||+|+|+.+|+.
T Consensus 382 ~~~~~~~~~g~~ama~t~G~p~ai~a~~i~~g~~~~~Gv~ 421 (450)
T 1ff9_A 382 EYGAPIGSGGYSAMAKLVGVPCAVAVKFVLDGTISDRGVL 421 (450)
T ss_dssp EECCCTTSSSCCHHHHHHHHHHHHHHHHHHHTSSCCCEEE
T ss_pred EeccccCCCCccceeHhhchHHHHHHHHHhCCCcCCCcee
Confidence 99999 89999999999999999999999999999998
|
| >2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-69 Score=615.53 Aligned_cols=348 Identities=26% Similarity=0.371 Sum_probs=295.9
Q ss_pred CcEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCCCCCCchHHhhcCcEEccC-cc-C--CcE-EEEecCCCc
Q psy12817 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQED-IS-E--ASI-IFGVKQVPV 76 (1201)
Q Consensus 2 ~~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sagr~f~D~eY~~AGA~I~ed-ls-~--adi-IlgVKepp~ 76 (1201)
.|+|||+||. ++|||||||||++|++|+++|++|+||+|++++|+|++|++|||+|+++ ++ + ||+ ||+||+|++
T Consensus 24 ~m~IGvpkE~-k~~E~RValtP~~V~~L~~~G~~V~VE~gA~a~f~D~~Y~~AGA~I~~~~~~~~a~aDi~IlkVkeP~~ 102 (394)
T 2qrj_A 24 AVTLHLRAET-KPLEARAALTPTTVKKLIAKGFKIYVEDSPQSTFNINEYRQAGAIIVPAGSWKTAPRDRIIIGLKEMPE 102 (394)
T ss_dssp CCEEEECCCC-STTCCCCSSCHHHHHHHHHTTCEEEEECCSSCSSCHHHHHHTTCEEECTTGGGGSCTTSEEECSSCCCT
T ss_pred ceEEEEEcCC-CCCCceeccCHHHHHHHHhCCCEEEEeCCCCCCCCHHHHHhCCcEEechhhhhcCCCCeEEEEECCCCc
Confidence 4799999996 8999999999999999999999999999999999999999999999976 33 3 885 999999999
Q ss_pred -cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccCC
Q psy12817 77 -DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHH 155 (1201)
Q Consensus 77 -~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~ 155 (1201)
+++++++++++|+|++++|++|++++++|+++|+|+||||.|+|++|+|+.+||.+||++|++..++.+|.+++..+..
T Consensus 103 ~~e~~~~~~~i~f~~~~~~q~~~~~l~~~l~~~~it~ia~E~v~~~~g~rL~sf~~iAG~~av~~a~~~lg~~~~g~~g~ 182 (394)
T 2qrj_A 103 TDTFPLVHEHIQFAHCYKDQAGWQNVLMRFIKGHGTLYDLEFLENDQGRRVAAFGFYAGFAGAALGVRDWAFKQTHSDDE 182 (394)
T ss_dssp TCCSCCCSEEEECCCCSSCCTTHHHHHHHHHHHTCEEEEGGGCBCTTSCBSCCCHHHHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHhhccCCcEEEEechhhccccCHHHHHHHHHCCCeEEEeeccCcCCCCEEeehhhHhHHHHHHHHHHHHHHhhcCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998877542
Q ss_pred CCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcC-cHHHHHHHHHHhhCCCcccCcccchhhhhcC
Q psy12817 156 TPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGS-GNVSQGAQEIFQELPYEYVPPEMLQKVAEHG 234 (1201)
Q Consensus 156 tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~-G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~g 234 (1201)
+| +....|.|..+++|+++.. +..++.++ .+|++|+|+|+ |+||+||+++|+.||+..
T Consensus 183 -~l---~~~~pm~s~~al~q~~~~~---l~~~~~~g-~~~~kV~ViG~~G~vG~~A~~~a~~lGa~~------------- 241 (394)
T 2qrj_A 183 -DL---PAVSPYPNEKALVKDVTKD---YKEALATG-ARKPTVLIIGALGRCGSGAIDLLHKVGIPD------------- 241 (394)
T ss_dssp -CC---CCCCCCSSHHHHHHHHHHH---HHHHHTTT-CCCCCEEEETTTSHHHHHHHHHHHHTTCCG-------------
T ss_pred -cC---CCccCccCHHHHHHHHHHH---HhhhhccC-CCCCeEEEEcCCCHHHHHHHHHHHhCCCCc-------------
Confidence 33 5555677766666655544 33211222 46899999999 999999999999999520
Q ss_pred CccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhccc-CCCCC
Q psy12817 235 SNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLL-RPNHM 313 (1201)
Q Consensus 235 a~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lm-kpg~~ 313 (1201)
..|+++|.+. ++.|++|+ .++++||||||++|..++|+|||+||+++ | |||
T Consensus 242 ~~V~v~D~~~-------~~~g~~~~------------------~i~~aDivIn~vlig~~aP~Lvt~e~v~~-m~k~g-- 293 (394)
T 2qrj_A 242 ANILKWDIKE-------TSRGGPFD------------------EIPQADIFINCIYLSKPIAPFTNMEKLNN-PNRRL-- 293 (394)
T ss_dssp GGEEEECHHH-------HTTCSCCT------------------HHHHSSEEEECCCCCSSCCCSCCHHHHCC-TTCCC--
T ss_pred CceEEeeccc-------cccCCchh------------------hHhhCCEEEECcCcCCCCCcccCHHHHhc-CcCCC--
Confidence 1466776543 22355442 24589999999999889999999999999 9 999
Q ss_pred CCCCCCCCCCCCCCceeEEEeeccCCCCCeeee---ccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCchHH
Q psy12817 314 PWLPTSDGAPPLPHRLLGICDISADPGGSIEFM---NECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPME 390 (1201)
Q Consensus 314 ~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~---~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP~e 390 (1201)
+||||||||+|||||++ +++||+++|+|.||.. +++||+||||||||++||++
T Consensus 294 ----------------sVIVDVA~D~GG~~et~~f~~~~Tt~~~P~~~~~g~--------~~~~V~~~~v~nlP~~lPrt 349 (394)
T 2qrj_A 294 ----------------RTVVDVSADTTNPHNPIPIYTVATVFNKPTVLVPTT--------AGPKLSVISIDHLPSLLPRE 349 (394)
T ss_dssp ----------------CEEEETTCCTTCTTCSSCSCCCCCBTTBCCEEECCS--------SSSCEEEECCTTGGGGSHHH
T ss_pred ----------------eEEEEEecCCCCCcCcccccccCCccCCCEEEECCC--------CCCCEEEEEeCChhhhhHHH
Confidence 99999999999999863 3999999999998763 25789999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccC
Q psy12817 391 ATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASN 432 (1201)
Q Consensus 391 AS~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~ 432 (1201)
||++||++++|||..|++.+. +.++++|++..+
T Consensus 350 AS~~~sn~llp~l~~l~~~~~---------~~v~~~A~~~~~ 382 (394)
T 2qrj_A 350 ASEFFSHDLLPSLELLPQRKT---------APVWVRAKKLFD 382 (394)
T ss_dssp HHHHHHHHHHHHHHTCTTTTT---------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCc---------cHHHHHHHHHhh
Confidence 999999999999999876553 667777766543
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-61 Score=550.79 Aligned_cols=338 Identities=21% Similarity=0.255 Sum_probs=285.9
Q ss_pred CcEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccCccCCcEEEEecCCCc---
Q psy12817 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQEDISEASIIFGVKQVPV--- 76 (1201)
Q Consensus 2 ~~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~edls~adiIlgVKepp~--- 76 (1201)
.|+|||+||. ++|||||||||++|++|+++|++|+||+|+| ++|+|++|++|||+|+ +++.||+||+||+|++
T Consensus 22 ~m~IgvpkE~-~~~E~RValtP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~-~~~~adiIlkVk~p~~~e~ 99 (381)
T 3p2y_A 22 MTLIGVPRES-AEGERRVALVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIG-DPWPADVVVKVNPPTSDEI 99 (381)
T ss_dssp TCEEEECCCC-STTCCCCSSCHHHHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEES-CCTTSSEEECSSCCCHHHH
T ss_pred ceEEEEEecC-CCCCceecCCHHHHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEe-eeecCCEEEEeCCCChhHH
Confidence 5899999996 7999999999999999999999999999997 9999999999999999 5666999999999996
Q ss_pred cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEecccccc-CCCceeeccchhhhHHHHHHHHHHHHHHHhccCC
Q psy12817 77 DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD-EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHH 155 (1201)
Q Consensus 77 ~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~-~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~ 155 (1201)
+.|++|+++|+|+|+ ..|++++++++++|+|+|+||.|+|. ++++|++|++||++|||.++++ |+.+|.+.+
T Consensus 100 ~~l~~g~~l~~~lh~----~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy~Av~~--aa~~l~~~~- 172 (381)
T 3p2y_A 100 SQLKPGSVLIGFLAP----RTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAVLL--GASLSTRFV- 172 (381)
T ss_dssp TTSCTTCEEEECCCT----TTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHHHHHHH--HHHHCSSCS-
T ss_pred hhccCCCEEEEEecc----ccCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHHHHHHH--HHHHhhhhh-
Confidence 679999999999999 45999999999999999999999985 4678999999999999999996 677777664
Q ss_pred CCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCC
Q psy12817 156 TPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGS 235 (1201)
Q Consensus 156 tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga 235 (1201)
|+| +++.+ +++|.+|+|+|+|++|+.|+++++++| +
T Consensus 173 -~~l--------------------------~~~~~-~v~~~kV~ViG~G~iG~~aa~~a~~lG----------------a 208 (381)
T 3p2y_A 173 -PML--------------------------TTAAG-TVKPASALVLGVGVAGLQALATAKRLG----------------A 208 (381)
T ss_dssp -SCE--------------------------ECSSC-EECCCEEEEESCSHHHHHHHHHHHHHT----------------C
T ss_pred -hhh--------------------------hcccC-CcCCCEEEEECchHHHHHHHHHHHHCC----------------C
Confidence 443 34444 488999999999999999999999999 5
Q ss_pred ccEEEecchhHHhhHHHhcCCccccccc-----ccCc----ccc--c-chhhhhcCCcCcEEEEceecCC-CCCcccCHH
Q psy12817 236 NTKIYACEVRRRNYLERIKGGGYDYQEY-----NENP----SLY--R-SLFASKIAPYASIIINGIYWAV-GSPKLLTLP 302 (1201)
Q Consensus 236 ~vkvy~~~~~~~~~~e~~~gg~f~~~ey-----~~~p----e~y--~-s~f~~~i~p~~DvlIn~~~w~~-~~PrLIT~e 302 (1201)
+|.+||....+.++++. .|..|...++ ..+. +++ . ..-.++.++.+||||+|+.||. ++|.|||++
T Consensus 209 ~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~e 287 (381)
T 3p2y_A 209 KTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAA 287 (381)
T ss_dssp EEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHH
T ss_pred EEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHH
Confidence 67888888877777766 5655543211 0011 111 0 0112467889999999999995 899999999
Q ss_pred HHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCC
Q psy12817 303 DAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDN 382 (1201)
Q Consensus 303 ~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdN 382 (1201)
|++. |||| ++|+|+|||+|||||++ ++|+ . |+.+||+|||++|
T Consensus 288 mv~~-MkpG------------------sVIVDvA~d~GG~~e~t-~~~~----~-------------~~~~gV~~~~v~n 330 (381)
T 3p2y_A 288 AATG-MQPG------------------SVVVDLAGETGGNCELT-EPGR----T-------------IVHHGVTITSPLN 330 (381)
T ss_dssp HHHT-SCTT------------------CEEEETTGGGTCSBTTC-CTTC----E-------------EEETTEEEECCSC
T ss_pred HHhc-CCCC------------------cEEEEEeCCCCCccccc-cCCC----e-------------EEECCEEEEeeCC
Confidence 9999 9999 99999999999999994 6553 2 4568999999999
Q ss_pred cCCCchHHHHHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCC
Q psy12817 383 MPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNG 433 (1201)
Q Consensus 383 LPs~LP~eAS~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G 433 (1201)
||+.+|++||++|+++++|||..+.+.+ .|..|..|++|+++++|++|
T Consensus 331 lP~~vp~tAS~~~s~~l~~~l~~~~~~g---~~~~d~~d~i~~~~~~~~~g 378 (381)
T 3p2y_A 331 LPATMPEHASELYAKNVTALLDLLLTDD---GVAPDFTDEIVAASCITRTE 378 (381)
T ss_dssp TGGGSHHHHHHHHHHHHHHHHHHHEETT---EECCCTTSHHHHHHBSSCC-
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhCC---CccCCCcchhhhceEEeeCC
Confidence 9999999999999999999999988654 35556679999999999998
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-61 Score=553.74 Aligned_cols=347 Identities=16% Similarity=0.209 Sum_probs=285.7
Q ss_pred CcEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEcc-Ccc-CCcEEEEecCCCc-
Q psy12817 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQE-DIS-EASIIFGVKQVPV- 76 (1201)
Q Consensus 2 ~~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~e-dls-~adiIlgVKepp~- 76 (1201)
.|+|||+||. ++|||||+|||++|++|+++|++|+||+|+| ++|+|++|++|||+|.. +++ +||+||+||+|++
T Consensus 25 ~m~IGvpkE~-~~~E~RValtP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~~~~adiIlkVk~p~~~ 103 (405)
T 4dio_A 25 SEIVFIAKES-DPNEGRVAGSVESVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILKVRRPSAQ 103 (405)
T ss_dssp -CEEEECCCC-CTTCCCCSCCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEECGGGGGGCSEEEEEECCCTT
T ss_pred ceEEEEecCC-CCCCceecCCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHcCCEEchHHhhccCCEEEEeCCCChh
Confidence 3789999995 8999999999999999999999999999997 99999999999999963 444 7999999999987
Q ss_pred --cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEecccccc-CCCceeeccchhhhHHHHHHHHHHHHHHHhcc
Q psy12817 77 --DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD-EGNRVVAFGKYAGVAGMVNILHGLGLRLLALG 153 (1201)
Q Consensus 77 --~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~-~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g 153 (1201)
+.|++|+++|+|+|+ ..|++++++++++|+|+|+||.|+|. +.++|++|++||++|||.++++ |+.+|.+.
T Consensus 104 e~~~l~~g~~l~~~lh~----~~~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy~Av~~--aa~~l~~~ 177 (405)
T 4dio_A 104 EISGYRSGAVVIAIMDP----YGNEEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGYQAVID--AAYEYDRA 177 (405)
T ss_dssp TGGGSCTTCEEEEECCC----TTCHHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHHHHHHH--HHHHCSSC
T ss_pred HHhhcCCCcEEEEEecc----ccCHHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHHHHHHH--HHHHhHhh
Confidence 458999999999998 34899999999999999999999985 4678999999999999999996 67877765
Q ss_pred CCCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhc
Q psy12817 154 HHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEH 233 (1201)
Q Consensus 154 ~~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ 233 (1201)
+ |+| +++.| +++|.+|+|+|+|++|++|+++++.+|
T Consensus 178 ~--~~l--------------------------~t~~g-~v~~~kV~ViG~G~iG~~aa~~a~~lG--------------- 213 (405)
T 4dio_A 178 L--PMM--------------------------MTAAG-TVPAAKIFVMGAGVAGLQAIATARRLG--------------- 213 (405)
T ss_dssp S--SCE--------------------------EETTE-EECCCEEEEECCSHHHHHHHHHHHHTT---------------
T ss_pred h--chh--------------------------hccCC-CcCCCEEEEECCcHHHHHHHHHHHHCC---------------
Confidence 4 443 23343 388999999999999999999999999
Q ss_pred CCccEEEecchhHHhhHHHhcCCccccccc-----------ccC--ccccc---chhhhhcCCcCcEEEEceecCC-CCC
Q psy12817 234 GSNTKIYACEVRRRNYLERIKGGGYDYQEY-----------NEN--PSLYR---SLFASKIAPYASIIINGIYWAV-GSP 296 (1201)
Q Consensus 234 ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey-----------~~~--pe~y~---s~f~~~i~p~~DvlIn~~~w~~-~~P 296 (1201)
++|.+||....+.++++. .|..|...+. |.+ ++.|. ..-.++.++.+||||+|+++|+ ++|
T Consensus 214 -a~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap 291 (405)
T 4dio_A 214 -AVVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAP 291 (405)
T ss_dssp -CEEEEECSSTTHHHHHHH-TTCEECCCCC-----------------CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCC
T ss_pred -CEEEEEcCCHHHHHHHHH-cCCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCC
Confidence 567888888877777766 5665543221 111 22221 1112457789999999999996 899
Q ss_pred cccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeE
Q psy12817 297 KLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVL 376 (1201)
Q Consensus 297 rLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~ 376 (1201)
+|+|++|++. |||| ++|+|+|||+|||||++ ++|+ + |..+||+
T Consensus 292 ~Lvt~emv~~-Mk~G------------------sVIVDvA~d~GG~~e~t-~~~~---~--------------~~~~GV~ 334 (405)
T 4dio_A 292 RLVTREMLDS-MKPG------------------SVVVDLAVERGGNIEGA-EAGK---V--------------TEVGGVR 334 (405)
T ss_dssp CCBCHHHHTT-SCTT------------------CEEEETTGGGTCSBTTC-CTTE---E--------------EEETTEE
T ss_pred EEecHHHHhc-CCCC------------------CEEEEEeCCCCCCcccc-CCCC---e--------------EEECCEE
Confidence 9999999999 9999 99999999999999994 6553 2 3458999
Q ss_pred EEeeCCcCCCchHHHHHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCC
Q psy12817 377 VCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKF 439 (1201)
Q Consensus 377 i~~VdNLPs~LP~eAS~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~ 439 (1201)
|||++|||+.+|++||++|+++++||+..+++.+. +.+..+..|++|++++++++|++|++-
T Consensus 335 ~~gv~nlP~~vp~tAS~~ls~~~~~~l~~l~~~g~-~~~~~~~~d~~l~~~~~~~~G~i~~~~ 396 (405)
T 4dio_A 335 IVGHLNVAGRIAASASLLYAKNLVTFLETMVSKET-KALALNMEDELVKATALTHGGAVVHPA 396 (405)
T ss_dssp EEECSSGGGGGHHHHHHHHHHHHHHHHHTTC------CCCCCTTSHHHHHHEEEETTEEC---
T ss_pred EEEeCCCCccCHHHHHHHHHHHHHHHHHHHHhCCc-chhcccccChHHhCceEEECCEEcCHH
Confidence 99999999999999999999999999999886652 113334569999999999999999864
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-50 Score=461.96 Aligned_cols=251 Identities=24% Similarity=0.458 Sum_probs=226.3
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
..++|||+|||||+||+.++++|.+. .+|+++|++.++++++.+ .+..+.+|+.| .+++.++++++|+||||+
T Consensus 13 ~g~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~~~~~~~~~~---~~~~~~~d~~d--~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNNENLEKVKE---FATPLKVDASN--FDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCHHHHHHHTT---TSEEEECCTTC--HHHHHHHHTTCSEEEECC
T ss_pred cCCccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcCHHHHHHHhc---cCCcEEEecCC--HHHHHHHHhCCCEEEEec
Confidence 34567899999999999999999764 689999999999887654 46788899998 899999999999999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeecC
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCG 721 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~cG 721 (1201)
|+.+|..++++|+++|+||||+||..+++++|++.|+++|++++++||+|||++|++|++++++++ +.++.+|||
T Consensus 86 p~~~~~~v~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G~~PG~~~~~a~~~~~~~~-----~~~~~~~~g 160 (365)
T 3abi_A 86 PGFLGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQELD-----LKEGYIYVG 160 (365)
T ss_dssp CGGGHHHHHHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCBTTTBHHHHHHHHHHHHSC-----EEEEEEEEE
T ss_pred CCcccchHHHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCCCCCchHHHHHHHHHHhcc-----ccceeEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999983 778899999
Q ss_pred CCCCCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCccccccccccccCCCceEEEeeCCCccchhhhccc
Q psy12817 722 GLPAPECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNI 801 (1201)
Q Consensus 722 GLPaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf~pg~~lE~ypNRDSl~Y~~~YgI 801 (1201)
|+| +.++|||+|+|+|||+++++++.+++++++||+++.++++++ .+.++ +|++.+|+|+++++..+.+.|
T Consensus 161 g~p--~~~~~~~~y~~~~s~~~~i~~~~~~~~~~~~G~~~~v~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~-- 231 (365)
T 3abi_A 161 GLP--KDPKPPLYYKITWSPRDLIEEYTRPARVIRNGKVSKVDPLSE----VKKVK-IGKFEFEAFISDGLRSMLETI-- 231 (365)
T ss_dssp EEE--SSCCTTTCCCCCSCHHHHHHHHHSCEEEEETTEEEEECTTTC----EEEEE-ETTEEEEEEECSCCTTHHHHS--
T ss_pred ccC--CCCCCcchhceeechhhhHHhhCCCcEEEECCeEEEecCcCc----ceEEe-cCCcceeeecccchhhhhhcc--
Confidence 996 678999999999999999999999999999999999999743 36676 488899999999987775655
Q ss_pred ccccccccccceeccCHHHHHHHHHHcCCCCCCc
Q psy12817 802 AAEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKE 835 (1201)
Q Consensus 802 ~~~~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep 835 (1201)
+++++.++|+||+||++.|+.|+++||++.++
T Consensus 232 --~~~~~~~~t~r~~g~~~~~~~L~~lGl~~~~~ 263 (365)
T 3abi_A 232 --NSERLEEWTLRWPGHLEKIKVLRELGFFKPEN 263 (365)
T ss_dssp --CCSEEEEEEEECTTHHHHHHHHHHTTTTSHHH
T ss_pred --CcCceeeeecccccHHHHHHHHHHhcCCCcch
Confidence 45799999999999999999999999987654
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=435.08 Aligned_cols=342 Identities=22% Similarity=0.351 Sum_probs=282.1
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccCcc---CCcEEEEecCCCc-
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQEDIS---EASIIFGVKQVPV- 76 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~edls---~adiIlgVKepp~- 76 (1201)
|+|||+||. ++|||||||||++|++|+++||+|+||+|+| ++|+|++|++|||+|+++.+ +||+|++||+|..
T Consensus 1 m~igv~~e~-~~~E~Rv~~~P~~v~~l~~~g~~v~ve~~ag~~~~f~d~~y~~aga~i~~~~~~~~~ad~i~~vksP~~~ 79 (361)
T 1pjc_A 1 MEIGVPKEI-KNQEFRVGLSPSSVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAWSREMVVKVKEPLPA 79 (361)
T ss_dssp CEEEECCCC-STTCCCCSCCHHHHHHHHTTTCEEEEETTTTGGGTCCHHHHHHHTCEEESSHHHHHTSSEEECSSCCCGG
T ss_pred CEEEEEccC-CCCCCeeCcCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEECCHHHHhcCCeEEEECCCCHH
Confidence 689999996 7899999999999999999999999999998 99999999999999997643 7999999999988
Q ss_pred --cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccC
Q psy12817 77 --DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGH 154 (1201)
Q Consensus 77 --~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~ 154 (1201)
..+.+++++++|.|+ ..|+++++.+.+++++.|+||.|++. ...+..+.+++.+||++++++ |+..+.+..
T Consensus 80 ~~~~~~~g~~~~~y~~~----~~~~~l~~~l~~~gi~~~~~etvp~k-~~~~~~l~~~s~~Ag~~a~~~--gA~nt~~~~ 152 (361)
T 1pjc_A 80 EYDLMQKDQLLFTYLHL----AAARELTEQLMRVGLTAIAYETVELP-NRSLPLLTPMSIIAGRLSVQF--GARFLERQQ 152 (361)
T ss_dssp GGGGCCTTCEEEECCCG----GGCHHHHHHHHHHTCEEEEGGGCCCT-TSCCTTTHHHHHHHHHHHHHH--HHHHTSGGG
T ss_pred HHHhhcCCCEEEEEecc----ccCHHHHHHHHHcCCeEEEEeeeEcc-cCCccccCcchHHHHHHHHHH--HHHHHhhcc
Confidence 456789999999998 45789999999999999999999975 345566899999999999996 555433221
Q ss_pred CCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcC
Q psy12817 155 HTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHG 234 (1201)
Q Consensus 155 ~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~g 234 (1201)
.|+++.++++++ +.|.+|+|+|+|.+|+.|+++++.+|
T Consensus 153 -------------------------~g~G~~l~~l~~-l~~~~VlViGaGgvG~~aa~~a~~~G---------------- 190 (361)
T 1pjc_A 153 -------------------------GGRGVLLGGVPG-VKPGKVVILGGGVVGTEAAKMAVGLG---------------- 190 (361)
T ss_dssp -------------------------TSCCCCTTCBTT-BCCCEEEEECCSHHHHHHHHHHHHTT----------------
T ss_pred -------------------------CCCceeccCCCC-CCCCEEEEECCCHHHHHHHHHHHhCC----------------
Confidence 122333445543 77899999999999999999999999
Q ss_pred CccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCC-CCCcccCHHHHhcccCCCCC
Q psy12817 235 SNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAV-GSPKLLTLPDAKNLLRPNHM 313 (1201)
Q Consensus 235 a~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~-~~PrLIT~e~v~~lmkpg~~ 313 (1201)
+.+.+++....+.+.+++..+..+... ..+++ .+. +.+..+|+||||+.++. +.|.++++++++. |+||
T Consensus 191 a~V~v~dr~~~r~~~~~~~~~~~~~~~--~~~~~----~~~-~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~-~~~g-- 260 (361)
T 1pjc_A 191 AQVQIFDINVERLSYLETLFGSRVELL--YSNSA----EIE-TAVAEADLLIGAVLVPGRRAPILVPASLVEQ-MRTG-- 260 (361)
T ss_dssp CEEEEEESCHHHHHHHHHHHGGGSEEE--ECCHH----HHH-HHHHTCSEEEECCCCTTSSCCCCBCHHHHTT-SCTT--
T ss_pred CEEEEEeCCHHHHHHHHHhhCceeEee--eCCHH----HHH-HHHcCCCEEEECCCcCCCCCCeecCHHHHhh-CCCC--
Confidence 456778877777776665322211010 00111 222 23457999999999986 7899999999988 8999
Q ss_pred CCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCchHHHHH
Q psy12817 314 PWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEATD 393 (1201)
Q Consensus 314 ~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP~eAS~ 393 (1201)
.+|+|+++++||+||+ +++|+++.|.+ ..+||+++|++|||+.+|+++|.
T Consensus 261 ----------------~~ivdv~~~~gg~~e~-~~~~~~~~~~~-------------~~~~v~~~~~~~lp~~~~~~~s~ 310 (361)
T 1pjc_A 261 ----------------SVIVDVAVDQGGCVET-LHPTSHTQPTY-------------EVFGVVHYGVPNMPGAVPWTATQ 310 (361)
T ss_dssp ----------------CEEEETTCTTCCSBTT-CCCCCSSSCEE-------------EETTEEEECCSCGGGGCHHHHHH
T ss_pred ----------------CEEEEEecCCCCCCcc-ccCCCCCCCEE-------------EECCEEEEEeCCcchhhHHHHHH
Confidence 8999999999999998 58899999884 44789999999999999999999
Q ss_pred HHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCC
Q psy12817 394 FFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPK 438 (1201)
Q Consensus 394 ~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~ 438 (1201)
.|+++++|++..++.++. .. +..|++|++++++++|++|++
T Consensus 311 ~~~~~~~~~l~~l~~~G~-~~---~~~~~~~~~~~~~~~g~~~~~ 351 (361)
T 1pjc_A 311 ALNNSTLPYVVKLANQGL-KA---LETDDALAKGLNVQAHRLVHP 351 (361)
T ss_dssp HHHHHHHHHHHHHHHHGG-GG---GGTCHHHHHHEEEETTEECCH
T ss_pred HHHHHHHHHHHHHHhCCc-cc---cccChHHhcCeEEeCCEEcCH
Confidence 999999999999997764 33 356999999999999999985
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=441.44 Aligned_cols=347 Identities=20% Similarity=0.267 Sum_probs=279.4
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC--ccCCcEEEEecCCCc--
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED--ISEASIIFGVKQVPV-- 76 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed--ls~adiIlgVKepp~-- 76 (1201)
..|+++||. ++|||||+|||++|++|+++|++|+||++++ ++|+|++|++|||+|+++ +++||+||++|+|..
T Consensus 8 ~~~~~~~e~-~~~E~Rv~ltP~~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~~adiil~vk~p~~~~ 86 (401)
T 1x13_A 8 GRIGIPRER-LTNETRVAATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDE 86 (401)
T ss_dssp CEEEECCCC-STTCCCCSCCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGGSSSEEECSSCCCHHH
T ss_pred CceeecccC-CCCCeeeCCCHHHHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHhcCCeEEEeCCCCHHH
Confidence 579999995 9999999999999999999999999999986 999999999999999977 767999999999974
Q ss_pred -cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEecccccc-CCCceeeccchhhhHHHHHHHHHHHHHHHhccC
Q psy12817 77 -DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD-EGNRVVAFGKYAGVAGMVNILHGLGLRLLALGH 154 (1201)
Q Consensus 77 -~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~-~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~ 154 (1201)
+.+++++++|+|.|+ .+|+.+++++.++||++|+||.+++. .+++++.|++++++||+.+++. +.+.+.+.+
T Consensus 87 i~~l~~~~~li~~~~~----~~d~~~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~~~a~~ag~~av~~--~~~~~~~~~ 160 (401)
T 1x13_A 87 IALLNPGTTLVSFIWP----AQNPELMQKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVE--AAHEFGRFF 160 (401)
T ss_dssp HTTCCTTCEEEECCCG----GGCHHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHHHHHHHHHHHHHHH--HHHHCSSCS
T ss_pred HHHhcCCCcEEEEecC----CCCHHHHHHHHHCCCEEEEeehhhhhhhhcccchHHHHHHHHHHHHHHH--HHHhccccc
Confidence 668899999999998 67999999999999999999999973 5678999999999999999997 444432211
Q ss_pred CCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcC
Q psy12817 155 HTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHG 234 (1201)
Q Consensus 155 ~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~g 234 (1201)
++ ....+| .+++.+|+|+|+|++|++|+++|+++|+
T Consensus 161 --~~-----------------------~~~~~g----~l~g~~V~ViGaG~iG~~aa~~a~~~Ga--------------- 196 (401)
T 1x13_A 161 --TG-----------------------QITAAG----KVPPAKVMVIGAGVAGLAAIGAANSLGA--------------- 196 (401)
T ss_dssp --SC-----------------------EEETTE----EECCCEEEEECCSHHHHHHHHHHHHTTC---------------
T ss_pred --CC-----------------------ceeecc----CcCCCEEEEECCCHHHHHHHHHHHHCCC---------------
Confidence 11 111122 4778999999999999999999999994
Q ss_pred CccEEEecchhHHhhHHHhcCCcccccc---ccc------------CcccccchhhhhcCCcCcEEEEceecCC-CCCcc
Q psy12817 235 SNTKIYACEVRRRNYLERIKGGGYDYQE---YNE------------NPSLYRSLFASKIAPYASIIINGIYWAV-GSPKL 298 (1201)
Q Consensus 235 a~vkvy~~~~~~~~~~e~~~gg~f~~~e---y~~------------~pe~y~s~f~~~i~p~~DvlIn~~~w~~-~~PrL 298 (1201)
.+.+++.+..+.+.++. .|..|...+ +.+ ..+.+.+.+ .+.++.+||||+|++|+. ++|.+
T Consensus 197 -~V~v~D~~~~~~~~~~~-lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l-~e~~~~aDvVI~~~~~pg~~ap~l 273 (401)
T 1x13_A 197 -IVRAFDTRPEVKEQVQS-MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF-AAQAKEVDIIVTTALIPGKPAPKL 273 (401)
T ss_dssp -EEEEECSCGGGHHHHHH-TTCEECCC--------CCHHHHHHSHHHHHHHHHHH-HHHHHHCSEEEECCCCTTSCCCCC
T ss_pred -EEEEEcCCHHHHHHHHH-cCCEEEEecccccccccccchhhccHHHHHHHHHHH-HHHhCCCCEEEECCccCCCCCCee
Confidence 45566655555555433 344332100 000 001111223 356678999999999984 79999
Q ss_pred cCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEE
Q psy12817 299 LTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVC 378 (1201)
Q Consensus 299 IT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~ 378 (1201)
+++++++. |||| ++|+|+++|.||+|++ |++++|+ +..+||+++
T Consensus 274 i~~~~l~~-mk~g------------------~vIVdva~~~Gg~v~~----~~~~~p~-------------~~~~gv~i~ 317 (401)
T 1x13_A 274 ITREMVDS-MKAG------------------SVIVDLAAQNGGNCEY----TVPGEIF-------------TTENGVKVI 317 (401)
T ss_dssp BCHHHHHT-SCTT------------------CEEEETTGGGTCSBTT----CCTTSEE-------------ECTTSCEEE
T ss_pred eCHHHHhc-CCCC------------------cEEEEEcCCCCCCcCc----ccCCCce-------------EEECCEEEE
Confidence 99999999 9999 8999999999999988 3566775 456799999
Q ss_pred eeCCcCCCchHHHHHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCCc
Q psy12817 379 SIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKFK 440 (1201)
Q Consensus 379 ~VdNLPs~LP~eAS~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~~ 440 (1201)
|++|+|+++|++||++|++++++||..+ ..+....++.+..++++++++++++|+||+++-
T Consensus 318 g~~~~p~~~~~~a~~ll~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 378 (401)
T 1x13_A 318 GYTDLPGRLPTQSSQLYGTNLVNLLKLL-CKEKDGNITVDFDDVVIRGVTVIRAGEITWPAP 378 (401)
T ss_dssp CCSCTGGGSHHHHHHHHHHHHHHHHHHH-CCSSSSCCCCCTTSHHHHHHEEEETTEECCSCC
T ss_pred eeCCCcccCHHHHHHHHHHhHHHHHHHH-hcCccccccccCChHHHhcCeEEeCCEEcCCCC
Confidence 9999999999999999999999999655 344444566667789999999999999999873
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-47 Score=438.96 Aligned_cols=343 Identities=22% Similarity=0.340 Sum_probs=285.7
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccCc----cCCcEEEEecCCCc
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQEDI----SEASIIFGVKQVPV 76 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~edl----s~adiIlgVKepp~ 76 (1201)
|+|||+||. ++|||||||||++|++|++.|++|+||+|+| ++|+|++|+++||+|+++. ++||+|++||+|+.
T Consensus 1 m~igv~~e~-~~~E~Rv~ltP~~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~~adii~~vk~p~~ 79 (377)
T 2vhw_A 1 MRVGIPTET-KNNEFRVAITPAGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLLLKVKEPIA 79 (377)
T ss_dssp CEEEECCCC-STTCCCCSCCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHHHCSEEECSSCCCG
T ss_pred CEEEEEccC-CCCCcccCcCHHHHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhccCCEEEEeCCCCh
Confidence 689999996 7799999999999999999999999999996 9999999999999999764 36999999999987
Q ss_pred ---cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhcc
Q psy12817 77 ---DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALG 153 (1201)
Q Consensus 77 ---~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g 153 (1201)
..+.+++++++|+|+ ..|+++++++.++|+++|+||.++++. .++..++++|++||+.+++. ++|.+.+.
T Consensus 80 ~e~~~l~~~~~l~~~~~~----~~~~~~l~~l~~~gi~~ia~e~v~~~~-~~~p~~s~~ae~ag~~a~~~--a~r~l~~~ 152 (377)
T 2vhw_A 80 AEYGRLRHGQILFTFLHL----AASRACTDALLDSGTTSIAYETVQTAD-GALPLLAPMSEVAGRLAAQV--GAYHLMRT 152 (377)
T ss_dssp GGGGGCCTTCEEEECCCG----GGCHHHHHHHHHHTCEEEEGGGCCCTT-SCCTTTHHHHHHHHHHHHHH--HHHHTSGG
T ss_pred HHHhhcCCCCEEEEEecc----cCCHHHHHHHHHcCCeEEEeeeccccC-CCccccCchHHHHHHHHHHH--HHHHHHHh
Confidence 456889999999998 579999999999999999999998754 46677999999999999985 46766443
Q ss_pred CCCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhc
Q psy12817 154 HHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEH 233 (1201)
Q Consensus 154 ~~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ 233 (1201)
+ .|.++.++|++ .+.+.+|+|+|+|.+|+.+++.|+.+|
T Consensus 153 ~-------------------------~g~~~~~~~~~-~l~g~~V~ViG~G~iG~~~a~~a~~~G--------------- 191 (377)
T 2vhw_A 153 Q-------------------------GGRGVLMGGVP-GVEPADVVVIGAGTAGYNAARIANGMG--------------- 191 (377)
T ss_dssp G-------------------------TSCCCCTTCBT-TBCCCEEEEECCSHHHHHHHHHHHHTT---------------
T ss_pred c-------------------------CCCcccccCCC-CCCCCEEEEECCCHHHHHHHHHHHhCC---------------
Confidence 2 12223344555 378899999999999999999999999
Q ss_pred CCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCC-CCCcccCHHHHhcccCCCC
Q psy12817 234 GSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAV-GSPKLLTLPDAKNLLRPNH 312 (1201)
Q Consensus 234 ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~-~~PrLIT~e~v~~lmkpg~ 312 (1201)
+.|.+++....+.+.++...|..+.. ++ ..++ .+ .+.++.+|+||+|+.++. .+|.++++++++. ||||
T Consensus 192 -a~V~~~d~~~~~l~~~~~~~g~~~~~-~~-~~~~----~l-~~~l~~aDvVi~~~~~p~~~t~~li~~~~l~~-mk~g- 261 (377)
T 2vhw_A 192 -ATVTVLDINIDKLRQLDAEFCGRIHT-RY-SSAY----EL-EGAVKRADLVIGAVLVPGAKAPKLVSNSLVAH-MKPG- 261 (377)
T ss_dssp -CEEEEEESCHHHHHHHHHHTTTSSEE-EE-CCHH----HH-HHHHHHCSEEEECCCCTTSCCCCCBCHHHHTT-SCTT-
T ss_pred -CEEEEEeCCHHHHHHHHHhcCCeeEe-cc-CCHH----HH-HHHHcCCCEEEECCCcCCCCCcceecHHHHhc-CCCC-
Confidence 45778888777776666544543211 00 0111 12 234568999999999997 8999999999999 9999
Q ss_pred CCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCchHHHH
Q psy12817 313 MPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEAT 392 (1201)
Q Consensus 313 ~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP~eAS 392 (1201)
.+|+|+++|.||+||. +++++++.|+ +..++|++++++|||+.+|++||
T Consensus 262 -----------------~~iV~va~~~Ggv~e~-~ep~~~~~~~-------------~~~~~v~i~~~phl~~~~~~~as 310 (377)
T 2vhw_A 262 -----------------AVLVDIAIDQGGCFEG-SRPTTYDHPT-------------FAVHDTLFYCVANMPASVPKTST 310 (377)
T ss_dssp -----------------CEEEEGGGGTTCSBTT-CCCBCSSSCE-------------EEETTEEEECBTTGGGGSHHHHH
T ss_pred -----------------cEEEEEecCCCCcccc-ccCCCCCCCE-------------EEECCEEEEecCCcchhhHHHHH
Confidence 8899999999999998 4889999998 44578999999999999999999
Q ss_pred HHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCC
Q psy12817 393 DFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPK 438 (1201)
Q Consensus 393 ~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~ 438 (1201)
+.|+++++|++..++.++....+ ..++.|++++++++|++|++
T Consensus 311 ~~~~~~~~~~~~~l~~~g~~~~~---~~~~~l~~~v~~~~G~i~~~ 353 (377)
T 2vhw_A 311 YALTNATMPYVLELADHGWRAAC---RSNPALAKGLSTHEGALLSE 353 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HHCHHHHTTEEEETTEECCH
T ss_pred HHHHHHHHHHHHHHHhCChhhhh---hcChHHhCcEEeeCCEEcCH
Confidence 99999999999999976532223 34899999999999999985
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-47 Score=436.52 Aligned_cols=344 Identities=21% Similarity=0.279 Sum_probs=271.7
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC----ccCCcEEEEecCC--
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED----ISEASIIFGVKQV-- 74 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed----ls~adiIlgVKep-- 74 (1201)
|+|||+||. ++|||||||||++|++|++.|++|+||+|+| ++|+|++|++|||+|+++ +.+||+|+++|+|
T Consensus 1 m~igv~~e~-~~~E~Rv~l~P~~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~v~~p~~ 79 (384)
T 1l7d_A 1 MKIAIPKER-RPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMT 79 (384)
T ss_dssp CEEEECCCC-STTCCCCSCCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEEECCCC
T ss_pred CEEEEEccC-CCCCcccCCCHHHHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEEecCccc
Confidence 689999996 8999999999999999999999999999997 999999999999999965 4579999999998
Q ss_pred ---Cc---cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEecccccc-CCCceeeccchhhhHHHHHHHHHHHH
Q psy12817 75 ---PV---DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD-EGNRVVAFGKYAGVAGMVNILHGLGL 147 (1201)
Q Consensus 75 ---p~---~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~-~g~Rlvafg~~AgiAG~~avL~alg~ 147 (1201)
+. +.+++++++++|.|+ ..|+.+++++.++||++++||.+++. ...++..|++++.+||+.+++. |.
T Consensus 80 ~~~~~~~i~~l~~~~~~i~~~~~----~~~~~~~~~~~~~gi~~~~~e~~~~~~~~~~l~~l~~~a~~ag~~av~~--~~ 153 (384)
T 1l7d_A 80 AEEGTDEVALIKEGAVLMCHLGA----LTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVID--GA 153 (384)
T ss_dssp GGGSCCGGGGSCTTCEEEEECCG----GGCHHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHHHHHHHHHHHHHHH--HH
T ss_pred ccCCHHHHHhhccCCEEEEEecc----cCCHHHHHHHHHCCCEEEEeccccccccccccchhhHHHHHHHHHHHHH--HH
Confidence 44 567889999999998 45899999999999999999999974 4568889999999999999997 45
Q ss_pred HHHhccCCCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccc
Q psy12817 148 RLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEML 227 (1201)
Q Consensus 148 rlL~~g~~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dl 227 (1201)
+++.+. .|++. +++ +++++.+|+|+|+|++|++|+++++++|++ |...|
T Consensus 154 ~~~~~~--~~~~~--------------------------~~~-~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~~~d- 202 (384)
T 1l7d_A 154 YEFARA--FPMMM--------------------------TAA-GTVPPARVLVFGVGVAGLQAIATAKRLGAV-VMATD- 202 (384)
T ss_dssp HHCSSC--SSCEE--------------------------ETT-EEECCCEEEEECCSHHHHHHHHHHHHTTCE-EEEEC-
T ss_pred HHhhhc--ccchh--------------------------ccC-CCCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEe-
Confidence 554432 23321 122 247789999999999999999999999965 54444
Q ss_pred hhhhhcCCccEEEecchhHHhhHHHhcCC-----------------ccccccccc-CcccccchhhhhcCCcCcEEEEce
Q psy12817 228 QKVAEHGSNTKIYACEVRRRNYLERIKGG-----------------GYDYQEYNE-NPSLYRSLFASKIAPYASIIINGI 289 (1201)
Q Consensus 228 r~~~~~ga~vkvy~~~~~~~~~~e~~~gg-----------------~f~~~ey~~-~pe~y~s~f~~~i~p~~DvlIn~~ 289 (1201)
....+.+.++. .|. +|.+. +.+ ..+.....+ .+.++.+|+||+|+
T Consensus 203 --------------~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~l-~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 203 --------------VRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKE-MGEEFRKKQAEAV-LKELVKTDIAITTA 265 (384)
T ss_dssp --------------SCSTTHHHHHH-TTCEECCC------------------------CCHHHHH-HHHHTTCSEEEECC
T ss_pred --------------CCHHHHHHHHH-cCCeEEeecccccccccccccchhh-cCHHHHhhhHHHH-HHHhCCCCEEEECC
Confidence 33333333322 332 23221 000 000001112 34667899999999
Q ss_pred ecCC-CCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCcccc
Q psy12817 290 YWAV-GSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTK 368 (1201)
Q Consensus 290 ~w~~-~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~ 368 (1201)
+|+. ++|.++++++++. |||| ++|+|+++|.||+||++ ++++ .
T Consensus 266 ~~pg~~~~~li~~~~l~~-mk~g------------------~vivdva~~~gg~~~~~-~~~~----~------------ 309 (384)
T 1l7d_A 266 LIPGKPAPVLITEEMVTK-MKPG------------------SVIIDLAVEAGGNCPLS-EPGK----I------------ 309 (384)
T ss_dssp CCTTSCCCCCSCHHHHTT-SCTT------------------CEEEETTGGGTCSSTTC-CTTC----E------------
T ss_pred ccCCCCCCeeeCHHHHhc-CCCC------------------CEEEEEecCCCCCeecc-cCCc----E------------
Confidence 9985 6899999999999 9999 89999999999999983 3332 1
Q ss_pred ccccCCeEEEeeCCcCCCchHHHHHHHHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCC
Q psy12817 369 SFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKF 439 (1201)
Q Consensus 369 ~~~~~GV~i~~VdNLPs~LP~eAS~~fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~ 439 (1201)
+..+||+++|++|+|+.+|++||++|+++++||+..+.+.+. ..+..+..|++|++++++++|++|++.
T Consensus 310 -~~~~~v~i~g~~~~p~~~~~~a~~l~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~g~~~~~~ 378 (384)
T 1l7d_A 310 -VVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDT-KTLVMKLEDETVSGTCVTRDGAIVHPA 378 (384)
T ss_dssp -EEETTEEEECCSSGGGGGHHHHHHHHHHHHHHHHGGGEETTT-TEECCCTTCHHHHHHEEEETTEECCC-
T ss_pred -EEECCEEEEEeCCCcchhHHHHHHHHHHhHHHHHHHHHhCCc-chhhccccCHHHhcCeEEeCCEEcChh
Confidence 456799999999999999999999999999999998876541 123445679999999999999999875
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-47 Score=434.79 Aligned_cols=343 Identities=24% Similarity=0.350 Sum_probs=263.8
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC--ccCCcEEEEecCCCc--
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED--ISEASIIFGVKQVPV-- 76 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed--ls~adiIlgVKepp~-- 76 (1201)
|+|||+||. +++||||||||++|++|++.|++|+||+|+| ++|+|++|+++||+|+++ +++||+|++||+|..
T Consensus 1 m~ig~~~e~-~~~e~Rv~l~P~~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~~ad~il~vk~p~~~~ 79 (369)
T 2eez_A 1 MVIGVPKEI-KTLENRVALTPGGVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAWGAEMVVKVKEPLPEE 79 (369)
T ss_dssp CEEEECCCC-STTCCCCSSCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHTTSSEEECSSCCCGGG
T ss_pred CEEEEEccC-CCCCceeCcCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEecccceecCCEEEEECCCCHHH
Confidence 689999996 7899999999999999999999999999997 999999999999999976 558999999999987
Q ss_pred -cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccCC
Q psy12817 77 -DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHH 155 (1201)
Q Consensus 77 -~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~ 155 (1201)
+.+++++++|+|.|+ ..|+++++++.++||++|+||.++++.| ++..+++++.+|||.+++. |+++|.+.+
T Consensus 80 ~~~l~~~~~~~~~~~~----~~~~~~~~~l~~~gi~~ia~e~~~~~~~-~~~~l~~~s~~ag~~av~~--a~~~l~~~~- 151 (369)
T 2eez_A 80 YGFLREGLILFTYLHL----AADRGLTEAMLRSGVTGIAYETVQLPDG-TLPLLVPMSEVAGRMAPQV--GAQFLEKPK- 151 (369)
T ss_dssp GGGCCTTCEEEECCCG----GGCHHHHHHHHHHTCEEEEGGGCCCTTC-CCTTTHHHHHHHHHHHHHH--HHHHTSGGG-
T ss_pred HhhcCCCcEEEEEecc----cCCHHHHHHHHHCCCeEEEeeccccccC-CeeecccchHHHHHHHHHH--HHHHHHHhc-
Confidence 456799999999998 4589999999999999999999998644 5667999999999999995 677665432
Q ss_pred CCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCC
Q psy12817 156 TPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGS 235 (1201)
Q Consensus 156 tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga 235 (1201)
.|+++.++|++ .+.+.+|+|+|+|.+|+.+++.++.+| +
T Consensus 152 ------------------------~g~~~~~~~~~-~l~~~~V~ViGaG~iG~~~a~~l~~~G----------------a 190 (369)
T 2eez_A 152 ------------------------GGRGVLLGGVP-GVAPASVVILGGGTVGTNAAKIALGMG----------------A 190 (369)
T ss_dssp ------------------------TSCCCCTTCBT-BBCCCEEEEECCSHHHHHHHHHHHHTT----------------C
T ss_pred ------------------------CCCceecCCCC-CCCCCEEEEECCCHHHHHHHHHHHhCC----------------C
Confidence 23344555665 488999999999999999999999999 4
Q ss_pred ccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCC-CCCcccCHHHHhcccCCCCCC
Q psy12817 236 NTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAV-GSPKLLTLPDAKNLLRPNHMP 314 (1201)
Q Consensus 236 ~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~-~~PrLIT~e~v~~lmkpg~~~ 314 (1201)
+|.+++....+.+.+.+..|..+.. ++. .++ .+ ++.+..+|+||+|+.++. ++|.++++++++. ||+|
T Consensus 191 ~V~~~d~~~~~~~~~~~~~g~~~~~-~~~-~~~----~l-~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~-mk~g--- 259 (369)
T 2eez_A 191 QVTILDVNHKRLQYLDDVFGGRVIT-LTA-TEA----NI-KKSVQHADLLIGAVLVPGAKAPKLVTRDMLSL-MKEG--- 259 (369)
T ss_dssp EEEEEESCHHHHHHHHHHTTTSEEE-EEC-CHH----HH-HHHHHHCSEEEECCC-------CCSCHHHHTT-SCTT---
T ss_pred EEEEEECCHHHHHHHHHhcCceEEE-ecC-CHH----HH-HHHHhCCCEEEECCCCCccccchhHHHHHHHh-hcCC---
Confidence 5677777776666665534432110 100 111 11 234567999999999987 7999999999999 9999
Q ss_pred CCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCchHHHHHH
Q psy12817 315 WLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDF 394 (1201)
Q Consensus 315 ~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP~eAS~~ 394 (1201)
.+|+|++++.||+||++ ++++++.|. +..++|+++|++|||+.+|++||..
T Consensus 260 ---------------g~iV~v~~~~gg~~d~~-ep~~~~~~~-------------~~~~~v~~~~v~~lp~~~p~~as~~ 310 (369)
T 2eez_A 260 ---------------AVIVDVAVDQGGCVETI-RPTTHAEPT-------------YVVDGVVHYGVANMPGAVPRTSTFA 310 (369)
T ss_dssp ---------------CEEEECC---------------------------------CEETTEEEECCSCSGGGSHHHHHHH
T ss_pred ---------------CEEEEEecCCCCCCCcc-cCCCCCCCE-------------EEECCEEEEeeCCcchhcHHHHHHH
Confidence 78999999999999995 899999987 4457899999999999999999999
Q ss_pred HHHHhHHHHHHHHhcCCCCcccccCCCHHHHhcccccCCeecCCC
Q psy12817 395 FGNLVFPYALDILQSDASKPIEEHNFSPAVQAAIIASNGELTPKF 439 (1201)
Q Consensus 395 fs~~L~pyl~~l~~~~~~~~~~~~~~~~~l~~Avi~~~G~Lt~~~ 439 (1201)
|++++++++..++.++. +.+ ..++.+++++.+++|+++++.
T Consensus 311 ~~~~~~~~l~~l~~~g~-~~~---~~~~~l~~~~~~~~G~~~~~~ 351 (369)
T 2eez_A 311 LTNQTLPYVLKLAEKGL-DAL---LEDAALLKGLNTHKGRLTHPG 351 (369)
T ss_dssp HHHHHHHHHHHHHHHTT-HHH---HSCHHHHTTEEEETTEECCHH
T ss_pred HHHHHHHHHHHHHhcCh-hhh---hcChHHhcCEEeeCCEEcCHH
Confidence 99999999999997764 333 358899999999999999753
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=389.42 Aligned_cols=266 Identities=18% Similarity=0.326 Sum_probs=205.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCC--eEEEEeCCHHHHHHHHHHcC-----CeeEEEeecCCCCchHHHhhccC--Cc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENI--HITLGSLLKEDIDKVTNEFG-----RVEATLIDVNNGGSDNLSGLVRS--AD 635 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~--~VtVadR~~ekAe~La~~~~-----~v~~v~lDV~D~~~e~L~elI~~--~D 635 (1201)
|+||+|+|+|++|+.+++.|++.+++ +|++++|+.++++++++.++ ++..+.+|+.| .+++++++++ +|
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d--~~~l~~~l~~~~~D 78 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS--IEELVALINEVKPQ 78 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC--HHHHHHHHHHHCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC--HHHHHHHHHhhCCC
Confidence 68999999999999999999998765 89999999999999988763 47888999998 8899999987 89
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEcc-CCh--------HHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHH-
Q psy12817 636 LVVSLLPYNLHHHVAEFCIQHGKNLVTAS-YLS--------PEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDA- 705 (1201)
Q Consensus 636 VVIs~lP~~~h~~VakacIeaGkh~VD~S-yvs--------~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~ide- 705 (1201)
+||||+|+..|..++++|+++|+||+|++ |.. ....++++.|+++|+++++++|+|||+++++++.+.++
T Consensus 79 vVin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~PG~~~l~a~~~~~~~ 158 (405)
T 4ina_A 79 IVLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPGVTNVFCAYAQKHY 158 (405)
T ss_dssp EEEECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTTBHHHHHHHHHHHHT
T ss_pred EEEECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCccHHHHHHHHHHHhc
Confidence 99999998889999999999999999973 433 24468999999999999999999999999999987765
Q ss_pred hhhcCCcEEEEE--eecCCCCCCCCCCCcccccc--ccChHHHHHHhccceeeeeCCeEEEecCCccccccccccccCCC
Q psy12817 706 AHLNGGKVESFV--SYCGGLPAPECSENPLRYKF--SWSPRGVLLNTLSSAKYLQNSQVVDIPAGGELMRTARPLDFLPG 781 (1201)
Q Consensus 706 i~~~ggkV~sf~--s~cGGLPaPe~~~nPL~Ykf--SWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l~~~~~~idf~pg 781 (1201)
+ ++++++. .++|| ++||+| +|||++++.++.+++++|+||+++++|+++ ..+.++| |+
T Consensus 159 ~----~~i~~i~i~~~~gg---------~~g~~~~~~~sp~~~~~~~~~~~~~~~~G~~~~~~~~~----~~~~~~f-p~ 220 (405)
T 4ina_A 159 F----DEIHEIDILDCNAG---------DHGYPFATNFNPEINLREVSSKGRYWENGEWIETEPME----IMQVWDY-PE 220 (405)
T ss_dssp C----SEEEEEEEEEEECC---------BCSSSSCCSSCHHHHHHHTTSCEEEEETTEEEEESTTC----CEEEEEE-TT
T ss_pred c----CcccEEEEEEecCC---------CCCccceeeeCHHHHHHHhcCCcEEEECCEEEEecCCc----eeEEEEC-CC
Confidence 4 3455444 34443 456665 599999999999999999999999999984 3478885 88
Q ss_pred c-eEEEeeCCCccchhhhccccc---ccccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHHHHHHHHcC
Q psy12817 782 F-SFEGFANRDSLRYAQLYNIAA---EAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLG 857 (1201)
Q Consensus 782 ~-~lE~ypNRDSl~Y~~~YgI~~---~~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r~~l~~lL~ 857 (1201)
+ ++|+|+... .+...++. .++++...+-++++|.+.|+.|.+|||++++|+.. ++.+++|+|+++++|+
T Consensus 221 ~G~~~~y~~~~----~e~~tl~~~~~~~~~v~~~~~~~~~~~~~~~~L~~lGl~~~~~v~~---~g~~v~p~~~l~~~l~ 293 (405)
T 4ina_A 221 VGPKDSYLLYH----EELESLVRNIKGLKRIRFFMTFGQSYLTHMRCLENVGMLRIDEIEV---NGCKVVPIQVLKALLP 293 (405)
T ss_dssp TEEEEEEEECC----THHHHHHHHSTTCCEEEEEEECCHHHHHHHHHHHHHTTTCCSCEEE---TTEEECHHHHHHHHSC
T ss_pred CceeeEEEeCC----CcHHHHHhhCCCcceEEeecccCHHHHHHHHHHHHcCCCCCCceee---CCceecHHHHHHHhcc
Confidence 7 899996311 12222221 12222222223366778888888888888887652 3445555555555554
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=212.09 Aligned_cols=198 Identities=15% Similarity=0.236 Sum_probs=144.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCc-hHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENI---HITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGS-DNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~---~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~-e~L~elI~~~DVVIs~ 640 (1201)
++||+|||+|.||+.++..|++++++ +|+++|.+...+ .+.+.. +++....++++.+. +.+.++|++.|+|||+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~~~~~~-g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~ 90 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DVAQQY-GVSFKLQQITPQNYLEVIGSTLEENDFLIDV 90 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-CHHHHH-TCEEEECCCCTTTHHHHTGGGCCTTCEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-hHHhhc-CCceeEEeccchhHHHHHHHHhcCCCEEEEC
Confidence 57899999999999999999998766 699999876543 233333 45555555544113 3366788888999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc-------CCh-----------HHHHHHHHHHHH-cCCEEEeccccCchhHHHHHHH
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS-------YLS-----------PEMMALHERAAS-AGITVLNEVGLDPGIDHLLAME 701 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S-------yvs-----------~e~~eLde~Ake-AGVtil~e~GlDPGIdhmlA~~ 701 (1201)
+++.....++++|+++|+||+|++ +.. ...+++++.+++ +| +.+.++|+|||+.+.++..
T Consensus 91 s~~~~~l~Im~acleaGv~YlDTa~E~~~p~~~~~~~~p~~~~~Y~~~~~~~~~~~~~~G-tAilg~G~nPGvvsvf~~~ 169 (480)
T 2ph5_A 91 SIGISSLALIILCNQKGALYINAATEPWKEEFVMEKMALNRRTNYSLREEVLRLKDKTQK-TALITHGANPGLVSHFIKE 169 (480)
T ss_dssp CSSSCHHHHHHHHHHHTCEEEESSCCCCCC----------CCCHHHHHHHHHTTTTTCCS-CEECSCBTTTBHHHHHHHH
T ss_pred CccccCHHHHHHHHHcCCCEEECCCCcccccccccccCcchhhhHHHHHHHHHHHHhcCC-cEEecCCCCccHHHHHHHH
Confidence 998999999999999999999996 211 122345555544 78 8899999999999999987
Q ss_pred HHHHhhhc-C------------------CcEEEEEeecC--CCCCCCCCCCccccccccChHHHHHHhccceeeeeCCeE
Q psy12817 702 CIDAAHLN-G------------------GKVESFVSYCG--GLPAPECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQV 760 (1201)
Q Consensus 702 ~idei~~~-g------------------gkV~sf~s~cG--GLPaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~ 760 (1201)
.++.+-.. | -.|+.+.+..+ +.+ ..+..|..|..+|||+++|+++++|+...++|+.
T Consensus 170 Al~~la~d~g~~~~~~~~~~~~~~l~~~lgVk~IhiaerDtqv~--~~Pk~~~~F~~twS~eg~I~E~~~P~e~~wg~he 247 (480)
T 2ph5_A 170 ALLNIAKDNGLTINRPKNAAEWANLAMTLGIKVIHVAEQDSQVT--YPPKSPGEFVNTWSANGLILEGLQPAEIGWGTHE 247 (480)
T ss_dssp HHHHHHHTTTCCCCCCCSHHHHHHHHHHTTCCEEEEEEEECCEE--SSCCCTTEEEESSCHHHHHHHHHSEEEEECCTTC
T ss_pred HHHhHhhhcCCcccccccchhhhHHHhhcCceEEEEeeeccccc--ccCCCCCeeecccchhhhHHHhcCchhhcccccc
Confidence 76664211 0 12344444222 221 2234566899999999999999999999999888
Q ss_pred EEecCCc
Q psy12817 761 VDIPAGG 767 (1201)
Q Consensus 761 v~Vp~~~ 767 (1201)
+.+|+.+
T Consensus 248 ~~~p~~~ 254 (480)
T 2ph5_A 248 AHWPHDA 254 (480)
T ss_dssp CCCCTTE
T ss_pred cccCCcc
Confidence 8887753
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.59 E-value=8.7e-14 Score=155.02 Aligned_cols=265 Identities=18% Similarity=0.155 Sum_probs=182.8
Q ss_pred CcEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCCCCCCchHHhhcCcEEccC----ccCCcEEEE----e--
Q psy12817 2 GKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQED----ISEASIIFG----V-- 71 (1201)
Q Consensus 2 ~~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sagr~f~D~eY~~AGA~I~ed----ls~adiIlg----V-- 71 (1201)
+|+|.+...+ +.....+++|.+.|++|.++ .|+|++|.++||.+.++ +.++|+|+. +
T Consensus 7 ~mki~v~~~~--------~~~~~~~~~L~~~g~~v~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~ 73 (300)
T 2rir_A 7 GLKIAVIGGD--------ARQLEIIRKLTEQQADIYLV-----GFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTG 73 (300)
T ss_dssp SCEEEEESBC--------HHHHHHHHHHHHTTCEEEEE-----SCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEET
T ss_pred CCEEEEECCC--------HHHHHHHHHHHhCCCEEEEE-----eccccccccccceeccchHHHHhcCCEEEeccccccC
Confidence 4566666442 12346689999999999998 68999999999999865 347999997 6
Q ss_pred ---------cCC---Cc---cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhH
Q psy12817 72 ---------KQV---PV---DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVA 136 (1201)
Q Consensus 72 ---------Kep---p~---~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiA 136 (1201)
+++ +. +.+.+.+.++ .. -.|..+++++.+++|+++.+..... + + ++
T Consensus 74 ~~~i~s~~a~~~~~~~~~~l~~~~~l~~i~--~g-----~~~~d~~~~~~~~gi~v~~~~~~~~-----v-~------~~ 134 (300)
T 2rir_A 74 EGVVSTVFSNEEVVLKQDHLDRTPAHCVIF--SG-----ISNAYLENIAAQAKRKLVKLFERDD-----I-A------IY 134 (300)
T ss_dssp TTEECBSSCSSCEECCHHHHHTSCTTCEEE--ES-----SCCHHHHHHHHHTTCCEEEGGGSHH-----H-H------HH
T ss_pred CcccccccccCCccchHHHHhhcCCCCEEE--Ee-----cCCHHHHHHHHHCCCEEEeecCCCc-----e-E------EE
Confidence 343 22 4566777655 22 2578889999999999999876531 1 0 00
Q ss_pred HHHHHHHHHHHHHHhccCCCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhh
Q psy12817 137 GMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQE 216 (1201)
Q Consensus 137 G~~avL~alg~rlL~~g~~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~ 216 (1201)
..+-.+-|.. ..+++. .+ ..+...+++|+|.|++|+.+++.++.
T Consensus 135 --r~~~~~~g~~-------------------------~~~~~~------~~---~~l~g~~v~IiG~G~iG~~~a~~l~~ 178 (300)
T 2rir_A 135 --NSIPTVEGTI-------------------------MLAIQH------TD---YTIHGSQVAVLGLGRTGMTIARTFAA 178 (300)
T ss_dssp --HHHHHHHHHH-------------------------HHHHHT------CS---SCSTTSEEEEECCSHHHHHHHHHHHH
T ss_pred --cCccHHHHHH-------------------------HHHHHh------cC---CCCCCCEEEEEcccHHHHHHHHHHHH
Confidence 0000000000 000000 11 24667899999999999999999999
Q ss_pred CCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCCCCC
Q psy12817 217 LPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSP 296 (1201)
Q Consensus 217 Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~~~P 296 (1201)
+| .++.+|+....+.+.+.. .|.. .. .+. . .++.+..+|+||+++--
T Consensus 179 ~G----------------~~V~~~d~~~~~~~~~~~-~g~~--~~-------~~~-~-l~~~l~~aDvVi~~~p~----- 225 (300)
T 2rir_A 179 LG----------------ANVKVGARSSAHLARITE-MGLV--PF-------HTD-E-LKEHVKDIDICINTIPS----- 225 (300)
T ss_dssp TT----------------CEEEEEESSHHHHHHHHH-TTCE--EE-------EGG-G-HHHHSTTCSEEEECCSS-----
T ss_pred CC----------------CEEEEEECCHHHHHHHHH-CCCe--EE-------chh-h-HHHHhhCCCEEEECCCh-----
Confidence 98 456778766555443332 2321 00 011 1 23467889999999864
Q ss_pred cccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCCeE
Q psy12817 297 KLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPGVL 376 (1201)
Q Consensus 297 rLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~ 376 (1201)
.++++++++. |||| ++|+|++.++++ +++ .. ....|+.
T Consensus 226 ~~i~~~~~~~-mk~g------------------~~lin~a~g~~~-~~~-~~---------------------a~~~G~~ 263 (300)
T 2rir_A 226 MILNQTVLSS-MTPK------------------TLILDLASRPGG-TDF-KY---------------------AEKQGIK 263 (300)
T ss_dssp CCBCHHHHTT-SCTT------------------CEEEECSSTTCS-BCH-HH---------------------HHHHTCE
T ss_pred hhhCHHHHHh-CCCC------------------CEEEEEeCCCCC-cCH-HH---------------------HHHCCCE
Confidence 5888888877 9999 899999987655 333 10 2345899
Q ss_pred EEeeCCcCCCc-hHHHHHHHHHHhHHHHHHHHhc
Q psy12817 377 VCSIDNMPTQL-PMEATDFFGNLVFPYALDILQS 409 (1201)
Q Consensus 377 i~~VdNLPs~L-P~eAS~~fs~~L~pyl~~l~~~ 409 (1201)
+++++|+|..+ |.+|+.++++++.||+..+.+.
T Consensus 264 ~i~~pg~~g~v~~a~a~~l~~~~~~~~l~~~~~~ 297 (300)
T 2rir_A 264 ALLAPGLPGIVAPKTAGQILANVLSKLLAEIQAE 297 (300)
T ss_dssp EEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999 9999999999999999998754
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.45 E-value=6.5e-12 Score=139.60 Aligned_cols=258 Identities=17% Similarity=0.142 Sum_probs=171.4
Q ss_pred CCcEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCCCCCCchHHhhcCcEEccCc----cCCcEEEE----ec
Q psy12817 1 TGKVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNRRAYPVQAYANAGAIIQEDI----SEASIIFG----VK 72 (1201)
Q Consensus 1 ~~~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sagr~f~D~eY~~AGA~I~edl----s~adiIlg----VK 72 (1201)
++|+|.|...+ ......+++|.+.|++|.++ .|+|++|.++|+...+++ .++|+|+. ++
T Consensus 4 ~~m~i~v~~~~--------~~~~~~~~~L~~~g~~v~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~ 70 (293)
T 3d4o_A 4 TGKHVVIIGGD--------ARQLEIIRKLSTFDAKISLV-----GFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTN 70 (293)
T ss_dssp TTCEEEEECBC--------HHHHHHHHHHHHTTCEEEEE-----SCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCC
T ss_pred cCcEEEEECCC--------HHHHHHHHHHHhCCCEEEEe-----ccccccccccccccccchHHHHhcCCEEEecccccc
Confidence 35667666443 12345678899999999998 689999999999987653 46999986 32
Q ss_pred -----------CC---Cc---cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhh
Q psy12817 73 -----------QV---PV---DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGV 135 (1201)
Q Consensus 73 -----------ep---p~---~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~Agi 135 (1201)
++ +. +.+.+.+.++ .. -.|..+.+.+.+++|+++.+....+ +
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~l~~~~~l~~i~--~G-----~d~id~~~~~~~~gi~v~~~~~~~~--------------~ 129 (293)
T 3d4o_A 71 EAGKVDTIFSNESIVLTEEMIEKTPNHCVVY--SG-----ISNTYLNQCMKKTNRTLVKLMERDD--------------I 129 (293)
T ss_dssp TTCBCCBSSCSCCCBCCHHHHHTSCTTCEEE--ES-----SCCHHHHHHHHHHTCEEEEGGGCHH--------------H
T ss_pred CCceeecccccCCccchHHHHHhCCCCCEEE--ec-----CCCHHHHHHHHHcCCeEEEecCCce--------------e
Confidence 22 22 3455556543 22 2466777899999999998876221 1
Q ss_pred HHHH--HHHH-HHHHHHHhccCCCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHH
Q psy12817 136 AGMV--NILH-GLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQE 212 (1201)
Q Consensus 136 AG~~--avL~-alg~rlL~~g~~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~ 212 (1201)
.|+. .+-+ ++++ .|. . .+ ..+...+|+|+|.|++|+.+++
T Consensus 130 ~~~~~~svae~a~~~-~l~---------------------------~------~~---~~l~g~~v~IiG~G~iG~~~a~ 172 (293)
T 3d4o_A 130 AIYNSIPTAEGTIMM-AIQ---------------------------H------TD---FTIHGANVAVLGLGRVGMSVAR 172 (293)
T ss_dssp HHHHHHHHHHHHHHH-HHH---------------------------H------CS---SCSTTCEEEEECCSHHHHHHHH
T ss_pred eeeccHhHHHHHHHH-HHH---------------------------h------cC---CCCCCCEEEEEeeCHHHHHHHH
Confidence 1111 1111 0000 000 0 01 1355689999999999999999
Q ss_pred HHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecC
Q psy12817 213 IFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWA 292 (1201)
Q Consensus 213 ~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~ 292 (1201)
.++.+| .++.+|+....+.+.+.. .|..+. .+ .. .++.+..+|+||+++-
T Consensus 173 ~l~~~G----------------~~V~~~dr~~~~~~~~~~-~g~~~~---------~~-~~-l~~~l~~aDvVi~~~p-- 222 (293)
T 3d4o_A 173 KFAALG----------------AKVKVGARESDLLARIAE-MGMEPF---------HI-SK-AAQELRDVDVCINTIP-- 222 (293)
T ss_dssp HHHHTT----------------CEEEEEESSHHHHHHHHH-TTSEEE---------EG-GG-HHHHTTTCSEEEECCS--
T ss_pred HHHhCC----------------CEEEEEECCHHHHHHHHH-CCCeec---------Ch-hh-HHHHhcCCCEEEECCC--
Confidence 999998 446777766554443332 332110 01 11 1345778999999983
Q ss_pred CCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCcccccccc
Q psy12817 293 VGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKG 372 (1201)
Q Consensus 293 ~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~ 372 (1201)
+.+++++.++. |||| .+++|++..+++ +++ .. ...
T Consensus 223 ---~~~i~~~~l~~-mk~~------------------~~lin~ar~~~~-~~~-~~---------------------a~~ 257 (293)
T 3d4o_A 223 ---ALVVTANVLAE-MPSH------------------TFVIDLASKPGG-TDF-RY---------------------AEK 257 (293)
T ss_dssp ---SCCBCHHHHHH-SCTT------------------CEEEECSSTTCS-BCH-HH---------------------HHH
T ss_pred ---hHHhCHHHHHh-cCCC------------------CEEEEecCCCCC-CCH-HH---------------------HHH
Confidence 26888988888 9999 899999986554 333 11 234
Q ss_pred CCeEEEeeCCcCCCc-hHHHHHHHHHHhHHHHH
Q psy12817 373 PGVLVCSIDNMPTQL-PMEATDFFGNLVFPYAL 404 (1201)
Q Consensus 373 ~GV~i~~VdNLPs~L-P~eAS~~fs~~L~pyl~ 404 (1201)
.|+.+++++|+|+.+ |++||+.+++++++||.
T Consensus 258 ~Gv~~~~~~~l~~~v~p~~a~~~~~~~~~~~l~ 290 (293)
T 3d4o_A 258 RGIKALLVPGLPGIVAPKTAGRILADVLVKLLA 290 (293)
T ss_dssp HTCEEEECCCHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCCCcccCHHHHHHHHHHHHHHHhc
Confidence 589999999999999 99999999999999985
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.31 E-value=2e-11 Score=114.83 Aligned_cols=112 Identities=16% Similarity=0.205 Sum_probs=96.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.+++|+|+|+|.+|+.+++.|.+.+..+|++++|+.++++.+.. .++..+..|+.+ .+.+.++++++|+||+|+|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~--~~~~~~~~~~~d~vi~~~~~ 79 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR--MGVATKQVDAKD--EAGLAKALGGFDAVISAAPF 79 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT--TTCEEEECCTTC--HHHHHHHTTTCSEEEECSCG
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh--CCCcEEEecCCC--HHHHHHHHcCCCEEEECCCc
Confidence 46899999999999999999998865889999999999888763 367888899988 88899999999999999999
Q ss_pred cccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHH
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAAS 679 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~Ake 679 (1201)
..+..++++|+++|++++|.+...+..+++.+.+++
T Consensus 80 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 115 (118)
T 3ic5_A 80 FLTPIIAKAAKAAGAHYFDLTEDVAATNAVRALVED 115 (118)
T ss_dssp GGHHHHHHHHHHTTCEEECCCSCHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHhCCCEEEecCcHHHHHHHHHHHHh
Confidence 999999999999999999998755555555444443
|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.4e-11 Score=134.86 Aligned_cols=186 Identities=17% Similarity=0.240 Sum_probs=130.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc--cCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV--RSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI--~~~DVVIs~l 641 (1201)
++||+|||+|.+|+.++..|.+.+++++ .|+|++.++++++++.+ ++.. . +++++++ .++|+|+.|+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~-g~~~----~-----~~~~~~l~~~~~D~V~i~t 74 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRY-NCAG----D-----ATMEALLAREDVEMVIITV 74 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHH-TCCC----C-----SSHHHHHHCSSCCEEEECS
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc-CCCC----c-----CCHHHHhcCCCCCEEEEeC
Confidence 5799999999999999999998888884 58999999999998887 4432 1 2466666 4699999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEEE
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVESF 716 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~sf 716 (1201)
|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ .+.+++- .-|+|..+
T Consensus 75 p~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~--k~~i~~g--~iG~i~~v 150 (354)
T 3db2_A 75 PNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKM--KEMIDTK--EIGEVSSI 150 (354)
T ss_dssp CTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHH--HHHHHTT--TTCCEEEE
T ss_pred ChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHH--HHHHhcC--CCCCeEEE
Confidence 999999999999999999999864 5678899999999999987754 4688876554 2333321 33788888
Q ss_pred EeecCCCCCCCCCCCccccccccChHHHHHHh----ccceeeeeCCeEEEecC
Q psy12817 717 VSYCGGLPAPECSENPLRYKFSWSPRGVLLNT----LSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 717 ~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a~----~~~A~~l~dG~~v~Vp~ 765 (1201)
...+.....+.....+|+.....+..|++... ..-++++-+ ....|.+
T Consensus 151 ~~~~~~~~~~~~~~~~w~~~~~~~ggG~l~d~g~H~ld~~~~l~G-~~~~V~a 202 (354)
T 3db2_A 151 EAVFSNERGLELKKGNWRGEPATAPGGPLTQLGVHQIDNLQFLLG-PVARVFN 202 (354)
T ss_dssp EEEEECSGGGTCCTTCGGGCTTTSTTTHHHHTHHHHHHHHHHHHC-CEEEEEE
T ss_pred EEEEEeccCcccccCCCccccccCCCceeccchhHHHHHHHHHhC-CCeEEEE
Confidence 76654322112223345533222233354432 334555553 4555554
|
| >4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.6e-11 Score=135.61 Aligned_cols=148 Identities=14% Similarity=0.169 Sum_probs=112.8
Q ss_pred ccccCCCeEEEEcCchhHHH-HHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCc
Q psy12817 560 IQTEESRNVLLLGAGYVSRP-LIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SAD 635 (1201)
Q Consensus 560 ~~~~~mkKVLILGAG~VG~~-va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~D 635 (1201)
+...+|.||+|||+|.+|+. ++..+.+.++++| .|+|+++++++++++++ ++.... .+++++++ +.|
T Consensus 18 ~~~~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~-g~~~~y--------~d~~ell~~~~iD 88 (350)
T 4had_A 18 LYFQSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRF-SVPHAF--------GSYEEMLASDVID 88 (350)
T ss_dssp ----CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHH-TCSEEE--------SSHHHHHHCSSCS
T ss_pred ccccCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc-CCCeee--------CCHHHHhcCCCCC
Confidence 33467899999999999986 5778888888885 58999999999999998 443222 23555664 589
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcC
Q psy12817 636 LVVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNG 710 (1201)
Q Consensus 636 VVIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~g 710 (1201)
+|+.|+|..+|.+++++|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-
T Consensus 89 aV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~--k~~i~~G--~i 164 (350)
T 4had_A 89 AVYIPLPTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKV--RSLIDEG--AI 164 (350)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHH--HHHHHTT--TT
T ss_pred EEEEeCCCchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHh--hHhhhcC--CC
Confidence 999999999999999999999999999975 4567888999999999988765 4688876543 3333321 23
Q ss_pred CcEEEEEeec
Q psy12817 711 GKVESFVSYC 720 (1201)
Q Consensus 711 gkV~sf~s~c 720 (1201)
|+|..+....
T Consensus 165 G~i~~i~~~~ 174 (350)
T 4had_A 165 GSLRHVQGAF 174 (350)
T ss_dssp SSEEEEEEEE
T ss_pred CcceeeeEEE
Confidence 7888876544
|
| >3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.8e-10 Score=130.92 Aligned_cols=183 Identities=17% Similarity=0.264 Sum_probs=130.5
Q ss_pred CCCeEEEEcCchhHH-HHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 564 ESRNVLLLGAGYVSR-PLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~-~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
+++||+|||+|.+|+ .++..|.+.++++| .|+|++.++++++++.+ ++... . +++++++ +.|+|+.
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-g~~~~----~-----~~~~ll~~~~~D~V~i 95 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF-GGEPV----E-----GYPALLERDDVDAVYV 95 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH-CSEEE----E-----SHHHHHTCTTCSEEEE
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc-CCCCc----C-----CHHHHhcCCCCCEEEE
Confidence 357999999999998 78999998888885 48999999999999887 45432 2 3555554 5899999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEecc--ccCchhHHHHHHHHHHHhhhcCCcEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNEV--GLDPGIDHLLAMECIDAAHLNGGKVE 714 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e~--GlDPGIdhmlA~~~idei~~~ggkV~ 714 (1201)
|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+. .++|.+..+ ++.+++- .-|+|.
T Consensus 96 ~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~--k~~i~~G--~iG~i~ 171 (350)
T 3rc1_A 96 PLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQV--ADMLDEG--VIGEIR 171 (350)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHH--HHHHHTT--TTCSEE
T ss_pred CCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHH--HHHHhcC--CCCCeE
Confidence 99999999999999999999999864 56788999999999999887654 688876554 3333321 237898
Q ss_pred EEEeecCCCCCCCCCCCccccccccChHHHHHHh----ccceeeeeCCeEEEec
Q psy12817 715 SFVSYCGGLPAPECSENPLRYKFSWSPRGVLLNT----LSSAKYLQNSQVVDIP 764 (1201)
Q Consensus 715 sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a~----~~~A~~l~dG~~v~Vp 764 (1201)
.+...++. | ..+...|++.-..+ .|++... ..-++|+-+.+...|.
T Consensus 172 ~v~~~~~~-~--~~~~~~wr~~~~~g-GG~l~d~g~H~ld~~~~l~G~~~~~v~ 221 (350)
T 3rc1_A 172 SFAASFTI-P--PKPQGDIRYQADVG-GGALLDIGVYPIRAAGLFLGADLEFVG 221 (350)
T ss_dssp EEEEEEEC-C--CCCTTCGGGCTTTT-CHHHHHTTHHHHHHHHHHHCTTCEEEE
T ss_pred EEEEEEec-C--CCCccccccCcccC-ccHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 88877654 2 12233454432222 2444432 3345555554444443
|
| >4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-10 Score=134.16 Aligned_cols=142 Identities=19% Similarity=0.243 Sum_probs=109.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC--------CCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--C
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD--------ENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--S 633 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~--------~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~ 633 (1201)
+.||+|||+|.+|+.+++.+.+. .+++ +.|+|++++++++++++++ +..+. .+++++++ +
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~-~~~~y--------~d~~~ll~~~~ 96 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLG-AEKAY--------GDWRELVNDPQ 96 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHT-CSEEE--------SSHHHHHHCTT
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcC-CCeEE--------CCHHHHhcCCC
Confidence 47999999999999999888753 2456 5589999999999999984 33222 23555664 6
Q ss_pred CcEEEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhh
Q psy12817 634 ADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHL 708 (1201)
Q Consensus 634 ~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~ 708 (1201)
.|+|+.|+|...|.+++.+|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++-
T Consensus 97 vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~--k~~i~~G-- 172 (412)
T 4gqa_A 97 VDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLA--KQIIARG-- 172 (412)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHH--HHHHHHT--
T ss_pred CCEEEECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHH--HHHHhcC--
Confidence 89999999999999999999999999999975 5678899999999999987654 4688876553 3334331
Q ss_pred cCCcEEEEEee
Q psy12817 709 NGGKVESFVSY 719 (1201)
Q Consensus 709 ~ggkV~sf~s~ 719 (1201)
.-|+|..+...
T Consensus 173 ~iG~i~~~~~~ 183 (412)
T 4gqa_A 173 DIGEPVRFRGT 183 (412)
T ss_dssp TTCSEEEEEEE
T ss_pred CcCCeEEEEEE
Confidence 23788887653
|
| >3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-10 Score=131.27 Aligned_cols=185 Identities=14% Similarity=0.200 Sum_probs=132.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+++||+|||+|.+|+.+++.|.+.++++++ |+|++.++++++++.+ ++.. + .++++++++ ++|+|+.|
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~-~~~~----~----~~~~~~ll~~~~~D~V~i~ 74 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKEL-AIPV----A----YGSYEELCKDETIDIIYIP 74 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHT-TCCC----C----BSSHHHHHHCTTCSEEEEC
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHc-CCCc----e----eCCHHHHhcCCCCCEEEEc
Confidence 457999999999999999999988888865 8899999999999887 3321 1 224666666 79999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVES 715 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~s 715 (1201)
+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- ..|+|..
T Consensus 75 tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--k~~i~~g--~iG~i~~ 150 (330)
T 3e9m_A 75 TYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKV--KATIQEG--GLGEILW 150 (330)
T ss_dssp CCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHH--HHHHHTT--TTCSEEE
T ss_pred CCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHH--HHHHhCC--CCCCeEE
Confidence 9999999999999999999999864 5678899999999999988765 4688876543 2333321 2378888
Q ss_pred EEeecCCCCCCCCCCCccccccccChHHHHHH----hccceeeeeCCeEEEecC
Q psy12817 716 FVSYCGGLPAPECSENPLRYKFSWSPRGVLLN----TLSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 716 f~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a----~~~~A~~l~dG~~v~Vp~ 765 (1201)
+...++. | ..+..+|.+.-..+ .|++.. ..+-++|+-+.++..|.+
T Consensus 151 i~~~~~~-~--~~~~~~w~~~~~~g-gG~l~d~g~H~id~~~~l~G~~~~~v~a 200 (330)
T 3e9m_A 151 VQSVTAY-P--NVDHIPWFYSREAG-GGALHGSGSYPLQYLQYVLGKEIQEVTG 200 (330)
T ss_dssp EEEEEEE-S--CCTTCGGGGCTTTT-CSHHHHHSHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEEecc-c--CCCCcCcccCcccC-CCHHHHhhHHHHHHHHHHhCCCceEEEE
Confidence 8776543 2 11234565432222 234433 234566666656666654
|
| >4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida} | Back alignment and structure |
|---|
Probab=99.19 E-value=7.7e-11 Score=133.41 Aligned_cols=184 Identities=16% Similarity=0.245 Sum_probs=123.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC-------Ce-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN-------IH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SAD 635 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~-------~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~D 635 (1201)
.||+|||+|.+|+.+++.+.+.++ .+ +.|+|++++++++++++++ +..+. .+++++++ +.|
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g-~~~~~--------~d~~~ll~~~~iD 77 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLG-WSTTE--------TDWRTLLERDDVQ 77 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHT-CSEEE--------SCHHHHTTCTTCS
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcC-CCccc--------CCHHHHhcCCCCC
Confidence 489999999999999888876432 25 5689999999999999984 43322 23566665 589
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHH---HHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhh
Q psy12817 636 LVVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMAL---HERAASAGITVLNE--VGLDPGIDHLLAMECIDAAH 707 (1201)
Q Consensus 636 VVIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eL---de~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~ 707 (1201)
+|+.|+|..+|.+++.+|+++|+|++++.. ..++.++| .++++++|+.++.+ ..++|.+..+ ++.+++-
T Consensus 78 aV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~--k~~i~~g- 154 (390)
T 4h3v_A 78 LVDVCTPGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALA--RKLVADG- 154 (390)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHH--HHHHHTT-
T ss_pred EEEEeCChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHH--HHHHHcC-
Confidence 999999999999999999999999999975 34566666 55588899887654 4688876443 3333332
Q ss_pred hcCCcEEEEEeec--CCCCCCCCCCCccccccccCh--HHHHHH----hccceeeeeCCeEEEecC
Q psy12817 708 LNGGKVESFVSYC--GGLPAPECSENPLRYKFSWSP--RGVLLN----TLSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 708 ~~ggkV~sf~s~c--GGLPaPe~~~nPL~YkfSWSp--~gvL~a----~~~~A~~l~dG~~v~Vp~ 765 (1201)
..|+|..+.... +..+.| ..|....+.|.- .|+|.. ...-++|+-+.+++.|.+
T Consensus 155 -~iG~i~~v~~~~~~~~~~~~---~~~~~wr~~~~~~GgG~l~d~g~H~iD~~~~l~G~~~~~V~a 216 (390)
T 4h3v_A 155 -KIGTVRHVRAQYLQDWIADP---EAPLSWRLDKDKAGSGALGDIGAHIVDLTQFITGDRIAEVSG 216 (390)
T ss_dssp -SSCSEEEEEEEEECCTTCST---TSCCCGGGCHHHHSCSHHHHTHHHHHHHHHHHHSCCEEEEEE
T ss_pred -CCCcceeeEEEEeeeccCCC---CCCccccccccccCCcchhhhHHHHHHHHHHHhCCCceEEEE
Confidence 337888876533 222222 222222222221 234443 244567777777777754
|
| >3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.18 E-value=7.6e-11 Score=131.93 Aligned_cols=141 Identities=16% Similarity=0.174 Sum_probs=104.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
++||+|||+|.+|+.+++.|.+.++++++ ++|++++++++ + ++.+ .++ +++.+. .++|+|+.|+|.
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~----~-g~~~--~~~-----~~l~~~-~~~DvViiatp~ 75 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF----E-LQPF--RVV-----SDIEQL-ESVDVALVCSPS 75 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-----------C-CTTS--CEE-----SSGGGS-SSCCEEEECSCH
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH----c-CCCc--CCH-----HHHHhC-CCCCEEEECCCc
Confidence 57999999999999999999988888866 89999887764 2 3321 122 234444 689999999999
Q ss_pred cccHHHHHHHHHcCCeEEEccCC----hHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEee
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYL----SPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syv----s~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~ 719 (1201)
..|.++++.|+++|+|++|++.. .++.++|.+.|+++|+.++.++|++||+..+... +++- ..|++..+..|
T Consensus 76 ~~h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~~~~~~--i~~g--~lG~~~~~~~~ 151 (304)
T 3bio_A 76 REVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSDSVVRT--LMQA--IVPKGITYTNF 151 (304)
T ss_dssp HHHHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHH--HHHH--HSCEEEEEEEE
T ss_pred hhhHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHH--HHCC--CCCCcEEEEEe
Confidence 99999999999999999998653 3567889999999999988888999998875433 3332 23778878777
Q ss_pred cCC
Q psy12817 720 CGG 722 (1201)
Q Consensus 720 cGG 722 (1201)
+.+
T Consensus 152 ~~~ 154 (304)
T 3bio_A 152 GPG 154 (304)
T ss_dssp CSE
T ss_pred CCC
Confidence 643
|
| >3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.2e-10 Score=129.29 Aligned_cols=178 Identities=15% Similarity=0.160 Sum_probs=128.4
Q ss_pred CCeEEEEcCchhHHHHHHHHH-hCCCCeEE-EEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhccC--CcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLH-RDENIHIT-LGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVRS--ADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La-~~~~~~Vt-VadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~~--~DVVIs 639 (1201)
|+||+|||+|.+|+.++..|. +.++++++ |+|+++++++++++.++ .+.. .+++++++++ +|+|+.
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~---------~~~~~~ll~~~~~D~V~i 72 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATV---------YPNDDSLLADENVDAVLV 72 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEE---------ESSHHHHHHCTTCCEEEE
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCee---------eCCHHHHhcCCCCCEEEE
Confidence 579999999999999999998 66788854 89999999999998883 1222 1245666654 999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEE-Ee--ccccCchhHHHHHHHHHHHhhhcCCcE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITV-LN--EVGLDPGIDHLLAMECIDAAHLNGGKV 713 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVti-l~--e~GlDPGIdhmlA~~~idei~~~ggkV 713 (1201)
|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.+ +. ...++|.+..+ ++.+++- .-|+|
T Consensus 73 ~tp~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~--k~~i~~g--~iG~i 148 (344)
T 3mz0_A 73 TSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQL--KEALDNH--VIGEP 148 (344)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHH--HHHHHTT--TTSSE
T ss_pred CCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHH--HHHHHcC--CCCCc
Confidence 99999999999999999999999864 5678889999999999865 43 35688886553 3333321 23788
Q ss_pred EEEEeecCCCCCCCCCCCccccccccChHHHHHH----hccceeeeeCCeEEEecC
Q psy12817 714 ESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLN----TLSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 714 ~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a----~~~~A~~l~dG~~v~Vp~ 765 (1201)
..+..+... | . .|. .|...+.+.. ..+-++|+-+.+++.|.+
T Consensus 149 ~~v~~~~~~-~--~---~~~----~w~ggg~l~d~g~H~id~~~~l~G~~~~~V~a 194 (344)
T 3mz0_A 149 LMIHCAHRN-P--T---VGD----NYTTDMAVVDTLVHEIDVLHWLVNDDYESVQV 194 (344)
T ss_dssp EEEEEEEEC-S--C---CCT----TCCTTHHHHTTTHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEEEEecC-C--C---CCc----cccCCchhhhhhhHHHHHHHHhcCCCcEEEEE
Confidence 888876543 2 1 121 2544444433 234566666666666643
|
| >4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.1e-10 Score=127.39 Aligned_cols=180 Identities=17% Similarity=0.276 Sum_probs=130.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+|+||+|||+|.+|+.++..|.+.++++++ |+|+++++++++++.+ ++. ..| ++++++ ++|+|+.|
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~-~~~-----~~~-----~~~~l~~~~~D~V~i~ 70 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAY-GCE-----VRT-----IDAIEAAADIDAVVIC 70 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT-TCE-----ECC-----HHHHHHCTTCCEEEEC
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHh-CCC-----cCC-----HHHHhcCCCCCEEEEe
Confidence 367999999999999999999988888865 8999999999999887 444 222 455555 79999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVES 715 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~s 715 (1201)
+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-|+|..
T Consensus 71 tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--~~~i~~g--~iG~i~~ 146 (331)
T 4hkt_A 71 TPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAV--RKAIDDG--RIGEVEM 146 (331)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHH--HHHHHTT--TTCSEEE
T ss_pred CCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHH--HHHHHcC--CCCceEE
Confidence 9999999999999999999999854 5678899999999999988764 4688876543 2333321 2378888
Q ss_pred EEeecCCCCCCCCCCCccccccccChHHHHHH----hccceeeeeCCeEEEecC
Q psy12817 716 FVSYCGGLPAPECSENPLRYKFSWSPRGVLLN----TLSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 716 f~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a----~~~~A~~l~dG~~v~Vp~ 765 (1201)
+..++.. |. .+|+.|. ....|++.. ..+-++|+-+.+++.|.+
T Consensus 147 ~~~~~~~-~~----~~~~~~~--~~~gG~l~d~g~H~ld~~~~l~G~~~~~v~a 193 (331)
T 4hkt_A 147 VTITSRD-PS----APPVDYI--KRSGGIFRDMTIHDFDMARFLLGEEPVSVTA 193 (331)
T ss_dssp EEEEEEC-SS----CCCHHHH--HTTTCHHHHTHHHHHHHHHHHHCSCEEEEEE
T ss_pred EEEEecC-CC----CCchhhh--hcCCCeeehheehHHHHHHHHhCCCccEEEE
Confidence 8776643 21 1222221 122334433 244566666667777754
|
| >3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-10 Score=132.60 Aligned_cols=183 Identities=17% Similarity=0.174 Sum_probs=129.9
Q ss_pred CCeEEEEcCchhHHH-HHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRP-LIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~-va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
++||+|||+|.+|+. +++.|.+.++++++ |+|+++++++++++.++..... ++++++++ +.|+|+.|
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~---------~~~~~ll~~~~vD~V~i~ 75 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVL---------DNVPAMLNQVPLDAVVMA 75 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEE---------SSHHHHHHHSCCSEEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCccc---------CCHHHHhcCCCCCEEEEc
Confidence 479999999999985 88999888888865 8999999999999887544431 23555555 57999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEecc--ccCchhHHHHHHHHHHHhhhcCCcEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNEV--GLDPGIDHLLAMECIDAAHLNGGKVES 715 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e~--GlDPGIdhmlA~~~idei~~~ggkV~s 715 (1201)
+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+. .++|.+..+ ++.+++- .-|+|..
T Consensus 76 tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~--k~~i~~g--~iG~i~~ 151 (359)
T 3m2t_A 76 GPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQL--REMTQVD--EFGETLH 151 (359)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECCHHHHCHHHHHH--HHHHTSG--GGCCEEE
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCcHHHHHH--HHHHHCC--CCCCeEE
Confidence 9999999999999999999999865 55688899999999999887653 688876543 2233211 2378888
Q ss_pred EEeecCCCCCCCCCCCccccccccChHHHHHH----hccceeeeeCCeEEEecC
Q psy12817 716 FVSYCGGLPAPECSENPLRYKFSWSPRGVLLN----TLSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 716 f~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a----~~~~A~~l~dG~~v~Vp~ 765 (1201)
+...... +.| ....|++.-. ..|.+.. ...-++|+-++++..|.+
T Consensus 152 ~~~~~~~-~~~--~~~~w~~~~~--~gg~l~d~~~H~iD~~~~l~G~~~~~V~a 200 (359)
T 3m2t_A 152 IQLNHYA-NKP--RAPLWGLDST--LRSFLLAQAIHTIDLAITFGDGELRRVQS 200 (359)
T ss_dssp EEEEEEC-CCC--SSCCTTCSCH--HHHHHHHTHHHHHHHHHHHHCSCEEEEEE
T ss_pred EEEEEec-CCC--CCCCcccCCC--ccchhhhcccHHHHHHHHHhCCCceEEEE
Confidence 7754432 111 1234655432 2344433 234566676777777654
|
| >4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.5e-10 Score=129.38 Aligned_cols=143 Identities=17% Similarity=0.205 Sum_probs=107.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-------CCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-------DENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SA 634 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-------~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~ 634 (1201)
+.||+|||+|.+|+..++.+.. .++.+ +.|+|++++++++++++++ +.... .+++++++ +.
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g-~~~~y--------~d~~ell~~~~i 95 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFG-FEKAT--------ADWRALIADPEV 95 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHT-CSEEE--------SCHHHHHHCTTC
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhC-CCeec--------CCHHHHhcCCCC
Confidence 3589999999999988876643 24567 5689999999999999984 43222 23555554 58
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhc
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLN 709 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ 709 (1201)
|+|+.|+|..+|.+++.+|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .
T Consensus 96 DaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~--k~~i~~G--~ 171 (393)
T 4fb5_A 96 DVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHI--RKLVGDG--V 171 (393)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHH--HHHHHTT--T
T ss_pred cEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHH--HHHHHcC--C
Confidence 9999999999999999999999999999975 5678889999999999988764 4688875443 3333331 3
Q ss_pred CCcEEEEEeec
Q psy12817 710 GGKVESFVSYC 720 (1201)
Q Consensus 710 ggkV~sf~s~c 720 (1201)
.|+|..+....
T Consensus 172 iG~i~~v~~~~ 182 (393)
T 4fb5_A 172 IGRVNHVRVEM 182 (393)
T ss_dssp TCSEEEEEEEE
T ss_pred Cccccceeeee
Confidence 47888876544
|
| >3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.3e-10 Score=130.70 Aligned_cols=184 Identities=16% Similarity=0.174 Sum_probs=127.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+|+||+|||+|.+|+.+++.|.+.+++++ .|+||++++++++++.+ ++... ..+++++++ ++|+|+.|
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~-~~~~~--------~~~~~~ll~~~~~D~V~i~ 74 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKY-HLPKA--------YDKLEDMLADESIDVIYVA 74 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CC-CCSCE--------ESCHHHHHTCTTCCEEEEC
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHc-CCCcc--------cCCHHHHhcCCCCCEEEEC
Confidence 46799999999999999999988777774 58899999999888776 33211 124666666 79999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVES 715 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~s 715 (1201)
+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-|+|..
T Consensus 75 tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~--~~~i~~g--~iG~i~~ 150 (329)
T 3evn_A 75 TINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVI--KKLLASG--EIGEVIS 150 (329)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHH--HHHHHTT--TTCSEEE
T ss_pred CCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHH--HHHHhCC--CCCCeEE
Confidence 9999999999999999999999864 5678889999999999988765 4678876554 2333311 2378888
Q ss_pred EEeecCCCCCCCCCCCccccccccChHHHHHH----hccceeeeeCCeEEEec
Q psy12817 716 FVSYCGGLPAPECSENPLRYKFSWSPRGVLLN----TLSSAKYLQNSQVVDIP 764 (1201)
Q Consensus 716 f~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a----~~~~A~~l~dG~~v~Vp 764 (1201)
+...++. | ..+.++|.+....+ .|++.. ....++|+-+.....|.
T Consensus 151 v~~~~~~-~--~~~~~~w~~~~~~g-GG~l~d~g~H~id~~~~l~G~~~~~v~ 199 (329)
T 3evn_A 151 ISSTTAY-P--NIDHVTWFRELELG-GGTVHFMAPYALSYLQYLFDATITHAS 199 (329)
T ss_dssp EEEEEEC-T--TGGGSTTTTCGGGT-CSHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEecc-C--CCCCcccccCcccC-CcHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 8776543 3 22345565432222 233332 23345666655555554
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.6e-10 Score=128.64 Aligned_cols=180 Identities=17% Similarity=0.280 Sum_probs=130.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+|+||+|||+|.+|+.+++.|.+.++++++ |+|++.++++++++.++ +.. .++++++++ ++|+|+.|
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g-~~~---------~~~~~~~l~~~~~D~V~i~ 72 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANG-AEA---------VASPDEVFARDDIDGIVIG 72 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTT-CEE---------ESSHHHHTTCSCCCEEEEC
T ss_pred CceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcC-Cce---------eCCHHHHhcCCCCCEEEEe
Confidence 367999999999999999999988888855 89999999999998874 432 124667777 79999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVES 715 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~s 715 (1201)
+|...|.+++..|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-|+|..
T Consensus 73 tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--k~~i~~g--~iG~i~~ 148 (344)
T 3euw_A 73 SPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAI--NARVANQ--EIGNLEQ 148 (344)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHH--HHHHHTT--TTSSEEE
T ss_pred CCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHH--HHHHhcC--CCCceEE
Confidence 9999999999999999999999864 5578899999999999987764 4688876553 3333321 2378888
Q ss_pred EEeecCCCCCCCCCCCccccccccChHHHHHH----hccceeeeeCCeEEEecC
Q psy12817 716 FVSYCGGLPAPECSENPLRYKFSWSPRGVLLN----TLSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 716 f~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a----~~~~A~~l~dG~~v~Vp~ 765 (1201)
+..++.. |.+ .|+.|.- ...|++.. ..+-++|+-+ ++..|.+
T Consensus 149 v~~~~~~-~~~----~~~~~~~--~~gG~l~d~g~H~ld~~~~l~G-~~~~v~a 194 (344)
T 3euw_A 149 LVIISRD-PAP----APKDYIA--GSGGIFRDMTIHDLDMARFFVP-NIVEVTA 194 (344)
T ss_dssp EEEEEEC-SSC----CCHHHHH--HSCHHHHHTHHHHHHHHHHHCS-CEEEEEE
T ss_pred EEEEecC-CCC----CCccccc--CCCceeecchhhHHHHHHHhcC-CcEEEEE
Confidence 8876643 211 1222210 01234433 2345666666 7777764
|
| >3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.14 E-value=4.6e-10 Score=127.84 Aligned_cols=178 Identities=11% Similarity=0.167 Sum_probs=128.9
Q ss_pred CCeEEEEcCchhHHHHHHHHH-hCCCCeE-EEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLH-RDENIHI-TLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La-~~~~~~V-tVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
++||+|||+|.+|+.++..|. +.+++++ .|+|+++++++++++.++ .+.. .++++++++ +.|+|+.
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~---------~~~~~~ll~~~~~D~V~i 93 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKD---------YNDYHDLINDKDVEVVII 93 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEE---------ESSHHHHHHCTTCCEEEE
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCee---------eCCHHHHhcCCCCCEEEE
Confidence 469999999999999999998 6678885 489999999999998884 1222 124556665 5899999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEE-E--eccccCchhHHHHHHHHHHHhhhcCCcE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITV-L--NEVGLDPGIDHLLAMECIDAAHLNGGKV 713 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVti-l--~e~GlDPGIdhmlA~~~idei~~~ggkV 713 (1201)
|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.+ + ....++|.+..+ ++.+++- .-|++
T Consensus 94 ~tp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~--k~~i~~g--~iG~i 169 (357)
T 3ec7_A 94 TASNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQL--KNIIDSG--EIGQP 169 (357)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHH--HHHHHHT--TTCSE
T ss_pred cCCcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHH--HHHHhcC--CCCCe
Confidence 99999999999999999999999865 5678889999999999855 3 345788886654 3333331 23788
Q ss_pred EEEEeecCCCCCCCCCCCccccccccChHHHHHH----hccceeeeeCCeEEEecC
Q psy12817 714 ESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLN----TLSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 714 ~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a----~~~~A~~l~dG~~v~Vp~ 765 (1201)
..+..+... | . .|. .|...+.+.. ..+-++|+-+.+++.|.+
T Consensus 170 ~~v~~~~~~-~--~---~p~----~w~ggg~l~d~g~H~iDl~~~l~G~~~~~V~a 215 (357)
T 3ec7_A 170 LMVHGRHYN-A--S---TVP----EYKTPQAIYETLIHEIDVMHWLLNEDYKTVKV 215 (357)
T ss_dssp EEEEEEEEC-S--C---CCT----TCCTTHHHHTTHHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEEEEEeC-C--C---CCc----cccCCchhhhcccHHHHHHHHHcCCCceEEEE
Confidence 888877643 2 1 121 2554444433 244566777666666643
|
| >3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X | Back alignment and structure |
|---|
Probab=99.14 E-value=4.2e-10 Score=126.57 Aligned_cols=145 Identities=11% Similarity=0.173 Sum_probs=113.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC--Ce-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN--IH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~--~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
|+||+|||+|.+|+.+++.|.+.++ ++ +.|+||++++++++++.+ ++.... .+++++++ +.|+|+.
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~-~~~~~~--------~~~~~ll~~~~vD~V~i 72 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKH-DIPKAY--------GSYEELAKDPNVEVAYV 72 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHH-TCSCEE--------SSHHHHHHCTTCCEEEE
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHc-CCCccc--------CCHHHHhcCCCCCEEEE
Confidence 5799999999999999999987653 45 568999999999999888 332111 23566665 6999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVE 714 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~ 714 (1201)
|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..+.|.+..+ ++.+++- .-|+|.
T Consensus 73 ~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~--k~~i~~g--~iG~i~ 148 (334)
T 3ohs_X 73 GTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEAL--RSVLAQG--TLGDLR 148 (334)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHH--HHHHHHT--TTCSEE
T ss_pred CCCcHHHHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHH--HHHHhcC--CCCCeE
Confidence 99999999999999999999999865 5678899999999999988764 4578876554 2333321 237899
Q ss_pred EEEeecCC
Q psy12817 715 SFVSYCGG 722 (1201)
Q Consensus 715 sf~s~cGG 722 (1201)
.+.+.++.
T Consensus 149 ~v~~~~~~ 156 (334)
T 3ohs_X 149 VARAEFGK 156 (334)
T ss_dssp EEEEEEEC
T ss_pred EEEEEccC
Confidence 88877763
|
| >1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=99.14 E-value=4.3e-10 Score=127.17 Aligned_cols=147 Identities=15% Similarity=0.088 Sum_probs=114.2
Q ss_pred ccCCCeEEEEcCc-hhHHHHHHHHHhC-CCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcE
Q psy12817 562 TEESRNVLLLGAG-YVSRPLIEYLHRD-ENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADL 636 (1201)
Q Consensus 562 ~~~mkKVLILGAG-~VG~~va~~La~~-~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DV 636 (1201)
..++.||+|||+| .+|+.++..|.+. +++++ .|+|+++++++++++.++ +.... ++++++++ +.|+
T Consensus 15 ~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~-~~~~~--------~~~~~ll~~~~vD~ 85 (340)
T 1zh8_A 15 PLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVG-NPAVF--------DSYEELLESGLVDA 85 (340)
T ss_dssp -CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHS-SCEEE--------SCHHHHHHSSCCSE
T ss_pred CCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhC-CCccc--------CCHHHHhcCCCCCE
Confidence 4557899999999 8999999999887 77885 689999999999999884 32221 23556664 6899
Q ss_pred EEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCC
Q psy12817 637 VVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGG 711 (1201)
Q Consensus 637 VIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~gg 711 (1201)
|+.|+|...|.+++++|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++ ..-|
T Consensus 86 V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~--k~~i~~--g~iG 161 (340)
T 1zh8_A 86 VDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKA--KELVES--GAIG 161 (340)
T ss_dssp EEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHH--HHHHHT--TTTS
T ss_pred EEEeCCchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHH--HHHHhc--CCCC
Confidence 99999999999999999999999999864 5678889999999999987753 5688876553 333322 1237
Q ss_pred cEEEEEeecC
Q psy12817 712 KVESFVSYCG 721 (1201)
Q Consensus 712 kV~sf~s~cG 721 (1201)
+|..+..++.
T Consensus 162 ~i~~v~~~~~ 171 (340)
T 1zh8_A 162 DPVFMNWQIW 171 (340)
T ss_dssp SEEEEEEEEE
T ss_pred CcEEEEEEEe
Confidence 8888877654
|
| >3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=5.9e-10 Score=126.37 Aligned_cols=144 Identities=13% Similarity=0.183 Sum_probs=112.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhC-CCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRD-ENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~-~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVI 638 (1201)
.+|+||+|||+|.+|+.++..|.+. +++++ .|+|+++++++++++.+ ++.. . . +++++++ ++|+|+
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~-~~~~-~---~-----~~~~ll~~~~~D~V~ 80 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT-GARG-H---A-----SLTDMLAQTDADIVI 80 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH-CCEE-E---S-----CHHHHHHHCCCSEEE
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc-CCce-e---C-----CHHHHhcCCCCCEEE
Confidence 3578999999999999999999887 78885 48999999999999887 4432 1 2 3555555 799999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcE
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKV 713 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV 713 (1201)
.|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ .+.+++- .-|+|
T Consensus 81 i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--k~~i~~g--~iG~i 156 (354)
T 3q2i_A 81 LTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLL--KRAMQEK--RFGRI 156 (354)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHH--HHHHHTT--TTCSE
T ss_pred ECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHH--HHHHhcC--CCCce
Confidence 999999999999999999999999864 5567889999999999988754 4688875443 3333321 23788
Q ss_pred EEEEeec
Q psy12817 714 ESFVSYC 720 (1201)
Q Consensus 714 ~sf~s~c 720 (1201)
..+...+
T Consensus 157 ~~v~~~~ 163 (354)
T 3q2i_A 157 YMVNVNV 163 (354)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8776543
|
| >1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A | Back alignment and structure |
|---|
Probab=99.12 E-value=2.2e-10 Score=130.25 Aligned_cols=144 Identities=16% Similarity=0.194 Sum_probs=112.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhcc--CCcEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVR--SADLV 637 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~--~~DVV 637 (1201)
+++||+|||+|.+|+.+++.|.+.+++++ .|+|++.++++++++.++ .... ..+++++++ ++|+|
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~---------~~~~~~ll~~~~~D~V 75 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI---------HGSYESLLEDPEIDAL 75 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE---------ESSHHHHHHCTTCCEE
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCee---------eCCHHHHhcCCCCCEE
Confidence 46899999999999999999988878875 689999999999998873 1221 123556665 59999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhh--cC
Q psy12817 638 VSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHL--NG 710 (1201)
Q Consensus 638 Is~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~--~g 710 (1201)
+.|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++. +++ .-
T Consensus 76 ~i~tp~~~h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~--~~~---i~~g~~i 150 (362)
T 1ydw_A 76 YVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMWVHNPRTALL--KEF---LSDSERF 150 (362)
T ss_dssp EECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEECCCGGGSGGGTTT--TTG---GGCTTTT
T ss_pred EEcCChHHHHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEeeccCHHHHHH--HHH---HHhcCCc
Confidence 9999999999999999999999999864 5567899999999999998854 4688887543 222 222 23
Q ss_pred CcEEEEEeecC
Q psy12817 711 GKVESFVSYCG 721 (1201)
Q Consensus 711 gkV~sf~s~cG 721 (1201)
|+|..+.+.++
T Consensus 151 G~i~~v~~~~~ 161 (362)
T 1ydw_A 151 GQLKTVQSCFS 161 (362)
T ss_dssp CSEEEEEEEEE
T ss_pred cceEEEEEEEE
Confidence 78888776543
|
| >3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.3e-10 Score=126.23 Aligned_cols=181 Identities=18% Similarity=0.304 Sum_probs=129.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~l 641 (1201)
|+||+|||+|.+|+.++..|.+.++++++ |+|+++++++++++.++ +.... ++++++++ ++|+|+.|+
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~-~~~~~--------~~~~~ll~~~~~D~V~i~t 72 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLG-VEKAY--------KDPHELIEDPNVDAVLVCS 72 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHT-CSEEE--------SSHHHHHHCTTCCEEEECS
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhC-CCcee--------CCHHHHhcCCCCCEEEEcC
Confidence 57999999999999999999988888855 89999999999998873 32221 23556665 799999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEEE
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVESF 716 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~sf 716 (1201)
|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-|+|..+
T Consensus 73 p~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~--k~~i~~G--~iG~i~~~ 148 (344)
T 3ezy_A 73 STNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKL--KEAVENG--TIGKPHVL 148 (344)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHH--HHHHHTT--TTSSEEEE
T ss_pred CCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHH--HHHHHcC--CCCCeEEE
Confidence 999999999999999999999854 5678899999999999987654 4688876553 2333221 23788888
Q ss_pred EeecCCCCCCCCCCCccccccccChHHHHHH----hccceeeeeCCeEEEecC
Q psy12817 717 VSYCGGLPAPECSENPLRYKFSWSPRGVLLN----TLSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 717 ~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a----~~~~A~~l~dG~~v~Vp~ 765 (1201)
...+.. |. ..+|.|.- ...|++.. ..+-++|+-+.++..|.+
T Consensus 149 ~~~~~~-~~----~~~~~~~~--~~GG~l~d~g~H~lDl~~~l~G~~~~~V~a 194 (344)
T 3ezy_A 149 RITSRD-PA----PPPLDYIR--VSGGIFLDMTIHDFDMARYIMGEEVEEVFA 194 (344)
T ss_dssp EEEEEC-SS----CCCHHHHH--TTTCHHHHTHHHHHHHHHHHHSSCEEEEEE
T ss_pred EEEeeC-CC----CCCccccc--CCCceEecccchHHHHHHHHcCCCCeEEEE
Confidence 776532 21 12344321 11234433 234566666667777664
|
| >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.1e-10 Score=125.18 Aligned_cols=184 Identities=16% Similarity=0.164 Sum_probs=127.7
Q ss_pred CeEEEEcCchhHHHH-HHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcC
Q psy12817 566 RNVLLLGAGYVSRPL-IEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGAG~VG~~v-a~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~l 641 (1201)
+||+|||+|.+|+.+ +..|.+ +++++ .|+|++.++++++++.++ +.. +. .+++++++ ++|+|+.|+
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g-~~~----~~----~~~~~~l~~~~~D~V~i~t 70 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENG-IGK----SV----TSVEELVGDPDVDAVYVST 70 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTT-CSC----CB----SCHHHHHTCTTCCEEEECS
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcC-CCc----cc----CCHHHHhcCCCCCEEEEeC
Confidence 489999999999998 888887 77885 589999999999988873 321 11 23566665 599999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEEE
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVESF 716 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~sf 716 (1201)
|...|.++++.|+++|+|+++... ..++.++|.+.|+++|+.++.+ .+++|++..+ ++.+++- .-|+|.++
T Consensus 71 p~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~--~~~i~~g--~iG~i~~v 146 (332)
T 2glx_A 71 TNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAM--RDAIAEG--RIGRPIAA 146 (332)
T ss_dssp CGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHH--HHHHHTT--TTSSEEEE
T ss_pred ChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHH--HHHHHcC--CCCCeEEE
Confidence 999999999999999999999864 4567889999999999987754 5788886654 2233221 23789888
Q ss_pred EeecCCCCCCCCCCCccccccccChHHHHHH----hccceeeeeCCeEEEecC
Q psy12817 717 VSYCGGLPAPECSENPLRYKFSWSPRGVLLN----TLSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 717 ~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a----~~~~A~~l~dG~~v~Vp~ 765 (1201)
...+..-. | ....+|++...-...|++.. ..+.++++-+.+...|.+
T Consensus 147 ~~~~~~~~-~-~~~~~w~~~~~~~ggG~l~d~g~H~id~~~~l~G~~~~~V~a 197 (332)
T 2glx_A 147 RVFHAVYL-P-PHLQGWRLERPEAGGGVILDITVHDADTLRFVLNDDPAEAVA 197 (332)
T ss_dssp EEEEECBC-C-GGGTTGGGSCTTTTCSHHHHTHHHHHHHHHHHHTSCEEEEEE
T ss_pred EEEEcccC-C-CCCCCcccccCCCCCchHhhhhHHHHHHHHHHcCCCCcEEEE
Confidence 87665421 1 11223543211112244433 234566666556666654
|
| >3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A | Back alignment and structure |
|---|
Probab=99.10 E-value=6.6e-10 Score=125.95 Aligned_cols=178 Identities=15% Similarity=0.178 Sum_probs=123.7
Q ss_pred CCeEEEEcCchhHH-HHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHc--CCeeEEEeecCCCCchHHHhhcc--CCcEEE
Q psy12817 565 SRNVLLLGAGYVSR-PLIEYLHRDENIHI-TLGSLLKEDIDKVTNEF--GRVEATLIDVNNGGSDNLSGLVR--SADLVV 638 (1201)
Q Consensus 565 mkKVLILGAG~VG~-~va~~La~~~~~~V-tVadR~~ekAe~La~~~--~~v~~v~lDV~D~~~e~L~elI~--~~DVVI 638 (1201)
|+||+|||+|.+|+ .++..+.+.++++| .|+|++ +++++++.+ +++... . +++++++ +.|+|+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~~~~~~~~~~----~-----~~~~ll~~~~~D~V~ 70 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAPFKEKGVNFT----A-----DLNELLTDPEIELIT 70 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHHHHTTTCEEE----S-----CTHHHHSCTTCCEEE
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHhhCCCCCeEE----C-----CHHHHhcCCCCCEEE
Confidence 57999999999998 68888888788885 588988 667777664 454431 2 3455555 489999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcE
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKV 713 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV 713 (1201)
.|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.. ..++|.+..+ ++.+++- .-|+|
T Consensus 71 i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--~~~i~~g--~iG~i 146 (349)
T 3i23_A 71 ICTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAM--KQVVEQG--FLGEI 146 (349)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHH--HHHHHHT--TTCSE
T ss_pred EeCCcHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHH--HHHHhcC--CCCCE
Confidence 999999999999999999999999865 4678889999999999988764 4588876543 3333321 33789
Q ss_pred EEEEeecCCCCCCCCCCCccccccccChHHHHHHh----ccceeeeeCCeEEEec
Q psy12817 714 ESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLNT----LSSAKYLQNSQVVDIP 764 (1201)
Q Consensus 714 ~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a~----~~~A~~l~dG~~v~Vp 764 (1201)
..+.+.++... | ..+|+.. |...|++... ...++++-+ +...|.
T Consensus 147 ~~~~~~~~~~~-~---~~~w~~~--~~ggG~l~d~g~H~id~~~~l~G-~p~~V~ 194 (349)
T 3i23_A 147 NEVETHIDYYR-P---GSITEQG--PKENGSFYGLGIHLMDRMIALFG-RPDQVT 194 (349)
T ss_dssp EEEEEECCCBC-T---TSCCSCC--CGGGSHHHHTHHHHHHHHHHHHC-CCSEEE
T ss_pred EEEEEEecccC-C---chhhccc--CCCCCeehhhhhHHHHHHHHHhC-CCeEEE
Confidence 99887765422 2 2456543 2334444332 334455544 444444
|
| >3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.09 E-value=5.9e-10 Score=128.18 Aligned_cols=184 Identities=15% Similarity=0.176 Sum_probs=131.0
Q ss_pred CCeEEEEcCc-hhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 565 SRNVLLLGAG-YVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG-~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
++||+|||+| .+|..++..|.+.+++++ .|+|+++++++++++.+ ++... . +++++++ +.|+|+.|
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-g~~~~----~-----~~~ell~~~~vD~V~i~ 71 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEY-GIPVF----A-----TLAEMMQHVQMDAVYIA 71 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHH-TCCEE----S-----SHHHHHHHSCCSEEEEC
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHc-CCCeE----C-----CHHHHHcCCCCCEEEEc
Confidence 5799999999 999999999998888884 58999999999999888 55521 2 3555554 59999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVES 715 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~s 715 (1201)
+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-|+|..
T Consensus 72 tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~--k~~i~~g--~iG~i~~ 147 (387)
T 3moi_A 72 SPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTL--RAIVQEG--SVGRVSM 147 (387)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHH--HHHHHHC--TTCCEEE
T ss_pred CCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHH--HHHHhcC--CCCCeEE
Confidence 9999999999999999999999865 4678899999999999987754 4788876543 3344331 2378888
Q ss_pred EEeecCCCCCCCCCCCcccccc--ccChHHHHHH----hccceeeeeCCeEEEecCC
Q psy12817 716 FVSYCGGLPAPECSENPLRYKF--SWSPRGVLLN----TLSSAKYLQNSQVVDIPAG 766 (1201)
Q Consensus 716 f~s~cGGLPaPe~~~nPL~Ykf--SWSp~gvL~a----~~~~A~~l~dG~~v~Vp~~ 766 (1201)
+.+++-.- ....||.... .+...|++.. ..+-++|+-++++..|.+.
T Consensus 148 ~~~~~~~~----~~~~~~~~~~~~~~~ggG~l~d~g~H~id~~~~l~g~~~~~V~a~ 200 (387)
T 3moi_A 148 LNCFNYTD----FLYRPRRPEELDTSKGGGIIYNQLPHQIDSIKTITGQRITAVRAM 200 (387)
T ss_dssp EEEEEECC----GGGSCCCGGGGCGGGTCSHHHHTHHHHHHHHHHHHCCCEEEEEEE
T ss_pred EEEEeccc----cccCCCChhhcccccCCcchhhhHHHHHHHHHHHhCCCceEEEEE
Confidence 87754210 0112222210 1111244433 3445777777777777653
|
| >1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-10 Score=135.58 Aligned_cols=150 Identities=18% Similarity=0.194 Sum_probs=113.7
Q ss_pred cCCCeEEEEcCchhHH-HHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEE
Q psy12817 563 EESRNVLLLGAGYVSR-PLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~-~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVI 638 (1201)
.+++||+|||+|.+|+ .+++.|.+.+++++ .|+|++.++++++++.+ ++....+.+. ++++++++ ++|+|+
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~-g~~~~~~~~~----~~~~~ll~~~~vD~V~ 155 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEY-GVDPRKIYDY----SNFDKIAKDPKIDAVY 155 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHT-TCCGGGEECS----SSGGGGGGCTTCCEEE
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHh-CCCccccccc----CCHHHHhcCCCCCEEE
Confidence 3467999999999997 89999988777884 68999999999998887 3321000012 23556665 699999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcE
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKV 713 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV 713 (1201)
.|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ .+.+++- .-|+|
T Consensus 156 iatp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~--k~~i~~G--~iG~i 231 (433)
T 1h6d_A 156 IILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAA--VKLIREN--QLGKL 231 (433)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHH--HHHHHTT--SSCSE
T ss_pred EcCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEechhcCHHHHHH--HHHHHcC--CCCCc
Confidence 999999999999999999999999863 5677889999999999988754 4688886554 3333321 33788
Q ss_pred EEEEeecC
Q psy12817 714 ESFVSYCG 721 (1201)
Q Consensus 714 ~sf~s~cG 721 (1201)
..+..+++
T Consensus 232 ~~v~~~~~ 239 (433)
T 1h6d_A 232 GMVTTDNS 239 (433)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 88876654
|
| >3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.09 E-value=4.6e-10 Score=129.57 Aligned_cols=191 Identities=14% Similarity=0.072 Sum_probs=125.8
Q ss_pred CCCeEEEEcCch---hHHHHHHHHHhCCCCeEE--EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLGAGY---VSRPLIEYLHRDENIHIT--LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILGAG~---VG~~va~~La~~~~~~Vt--VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
++.||+|||+|. +|+.++..+...++++++ |+|+++++++++++++ ++.. ..+. .+++++++
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~-g~~~--~~~~----~~~~~ll~~~~~~~ 83 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQL-GVDS--ERCY----ADYLSMFEQEARRA 83 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHT-TCCG--GGBC----SSHHHHHHHHTTCT
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHh-CCCc--ceee----CCHHHHHhcccccC
Confidence 357999999999 999999988887778865 6799999999999887 3320 0011 23555554
Q ss_pred -CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHh
Q psy12817 633 -SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 633 -~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei 706 (1201)
+.|+|+.|+|...|.+++++|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++-
T Consensus 84 ~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--k~~i~~G 161 (398)
T 3dty_A 84 DGIQAVSIATPNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGVTYGYAGHQLIEQA--REMIAAG 161 (398)
T ss_dssp TCCSEEEEESCGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHH--HHHHHTT
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHH--HHHHhcC
Confidence 499999999999999999999999999999864 5678899999999999988754 4578876543 3333321
Q ss_pred hhcCCcEEEEEeec--CCCCCCC---CCCCccccccccCh-HHHHHHh----ccceeee-eCCeEEEecC
Q psy12817 707 HLNGGKVESFVSYC--GGLPAPE---CSENPLRYKFSWSP-RGVLLNT----LSSAKYL-QNSQVVDIPA 765 (1201)
Q Consensus 707 ~~~ggkV~sf~s~c--GGLPaPe---~~~nPL~YkfSWSp-~gvL~a~----~~~A~~l-~dG~~v~Vp~ 765 (1201)
.-|+|..+...+ +....|. .....|++.-..+- .|++... .+-++|+ -+.++..|.+
T Consensus 162 --~iG~i~~v~~~~~~~~~~~~~~~~~~~~~Wr~~~~~~G~gG~l~d~g~H~idl~~~l~~G~~~~~V~a 229 (398)
T 3dty_A 162 --ELGDVRMVHMQFAHGFHSAPVEAQSQATQWRVDPRQAGPSYVLGDVGTHPLYLSEVMLPDLKIKRLMC 229 (398)
T ss_dssp --TTCSEEEEEEEEECCTTCC------------------CCCSHHHHTTHHHHHHHHHHCTTCCEEEEEE
T ss_pred --CCCCeEEEEEEEecccccCccccccCCCCcccCHHHcCCccHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 237888877543 3332211 11222332211111 1344442 3456777 4447777754
|
| >3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.09 E-value=5.2e-10 Score=124.31 Aligned_cols=124 Identities=11% Similarity=0.210 Sum_probs=103.0
Q ss_pred CCCeEEEEcCchhHHH-HHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLGAGYVSRP-LIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~-va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+++||+|||+|.+|+. ++..|.+.++++++ |+|+++++++++++.+ ++.. .. +++++++++|+|+.|+
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-~~~~----~~-----~~~~ll~~~D~V~i~t 74 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDY-RIMP----FD-----SIESLAKKCDCIFLHS 74 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHH-TCCB----CS-----CHHHHHTTCSEEEECC
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc-CCCC----cC-----CHHHHHhcCCEEEEeC
Confidence 3579999999999996 88989887888865 8999999999999887 3332 22 3566666999999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHH
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHL 697 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhm 697 (1201)
|...|.+++..|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+
T Consensus 75 p~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~ 135 (308)
T 3uuw_A 75 STETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVGFNRRFCPMYKEI 135 (308)
T ss_dssp CGGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHH
T ss_pred CcHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCHHHHHH
Confidence 999999999999999999999854 5678889999999999988765 4688876543
|
| >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-09 Score=124.50 Aligned_cols=182 Identities=16% Similarity=0.231 Sum_probs=127.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~l 641 (1201)
+.||+|||+|.+|+.++..|.+.+++++ .|+|+++++++. ++.+ ++. +. ++++++++ +.|+|+.|+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~-a~~~-g~~-----~~----~~~~~ll~~~~~D~V~i~t 73 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREA-AAQK-GLK-----IY----ESYEAVLADEKVDAVLIAT 73 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHH-HHTT-TCC-----BC----SCHHHHHHCTTCCEEEECS
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHH-HHhc-CCc-----ee----CCHHHHhcCCCCCEEEEcC
Confidence 4799999999999999999998888885 588999998864 4444 443 12 24566665 799999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEEE
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVESF 716 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~sf 716 (1201)
|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-|+|..+
T Consensus 74 p~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--k~~i~~g--~iG~i~~~ 149 (359)
T 3e18_A 74 PNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLII--KEMFEQK--TIGEMFHL 149 (359)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHH--HHHHHHT--TTSSEEEE
T ss_pred CcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHH--HHHHHcC--CCCCeEEE
Confidence 999999999999999999999864 5678899999999999987654 4688876543 3333331 23788888
Q ss_pred EeecCCCCCCCCCCCccccccccChHHHHHH----hccceeeeeCCeEEEecC
Q psy12817 717 VSYCGGLPAPECSENPLRYKFSWSPRGVLLN----TLSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 717 ~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a----~~~~A~~l~dG~~v~Vp~ 765 (1201)
.+...+.+. ...+|+..-.. ..|++.. ..+.++|+-+.++..|.+
T Consensus 150 ~~~~~~~~~---~~~~wr~~~~~-gGG~l~d~g~H~iD~~~~l~G~~~~~v~a 198 (359)
T 3e18_A 150 ESRVHGANG---IPGDWRHLKAH-GGGMVLDWGVHLLDQLLFLVDSNVKSVSA 198 (359)
T ss_dssp EEEEECSSC---SCSSGGGCGGG-TCSHHHHTHHHHHHHHHHHCCSCEEEEEE
T ss_pred EEEEecCCC---CCCCcccCcCC-CCcHHHHHhhHHHHHHHHHhCCCCeEEEE
Confidence 765433221 11345432111 1234433 234566666666666654
|
| >3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.3e-10 Score=130.10 Aligned_cols=191 Identities=13% Similarity=0.116 Sum_probs=125.1
Q ss_pred CCCeEEEEcCch---hHHHHHHHHHhCCCCeEE--EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLGAGY---VSRPLIEYLHRDENIHIT--LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILGAG~---VG~~va~~La~~~~~~Vt--VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
++.||+|||+|. +|+.++..+...++++++ |+|+++++++++++++ ++.. ..+. .+++++++
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~-g~~~--~~~~----~~~~~ll~~~~~~~ 108 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGREL-GLDP--SRVY----SDFKEMAIREAKLK 108 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHH-TCCG--GGBC----SCHHHHHHHHHHCT
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHc-CCCc--cccc----CCHHHHHhcccccC
Confidence 346999999998 999999988887778864 7799999999999887 3320 0011 23555554
Q ss_pred -CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHh
Q psy12817 633 -SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 633 -~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei 706 (1201)
+.|+|+.|+|...|.+++++|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++-
T Consensus 109 ~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~--k~~i~~G 186 (417)
T 3v5n_A 109 NGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLTHNYTGYPMVRQA--REMIENG 186 (417)
T ss_dssp TCCSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEECGGGGSHHHHHH--HHHHHTT
T ss_pred CCCcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCCHHHHHH--HHHHhcC
Confidence 499999999999999999999999999999865 5678889999999999987654 4678876543 3333321
Q ss_pred hhcCCcEEEEEeec--CCCCCCC----CCCCccccccccCh-HHHHHH----hccceeeeeCCeEEEecC
Q psy12817 707 HLNGGKVESFVSYC--GGLPAPE----CSENPLRYKFSWSP-RGVLLN----TLSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 707 ~~~ggkV~sf~s~c--GGLPaPe----~~~nPL~YkfSWSp-~gvL~a----~~~~A~~l~dG~~v~Vp~ 765 (1201)
.-|+|..+.... +....|. .....|++.-..+- .|++.. ..+-++|+-+.+++.|.+
T Consensus 187 --~iG~i~~v~~~~~~~~~~~~~~~~~~~~~~Wr~~~~~~G~gG~l~d~g~H~lDl~~~l~G~~~~~V~a 254 (417)
T 3v5n_A 187 --DIGAVRLVQMEYPQDWLTENIEQSGQKQAAWRTDPARSGAGGSTGDIGTHAYNLGCFVSGLELEELAA 254 (417)
T ss_dssp --TTCSEEEEEEEEECCTTSCC--------------------CCHHHHTHHHHHHHHHHHHCCCEEEEEE
T ss_pred --CCCCeEEEEEEEecccccCccccccCCCcCcccCHHHcCCccHHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 237888877643 2222211 11122332211111 144444 244577776657777764
|
| >3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.7e-09 Score=123.49 Aligned_cols=143 Identities=20% Similarity=0.227 Sum_probs=110.0
Q ss_pred CCCeEEEEcCchhHHH-HHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 564 ESRNVLLLGAGYVSRP-LIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~-va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
++.||+|||+|.+|+. ++..|.+.++++| .|+|++.++++ +.++++... .+++++++ +.|+|+.
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~---~~~~~~~~~---------~~~~~ll~~~~~D~V~i 73 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK---RDLPDVTVI---------ASPEAAVQHPDVDLVVI 73 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH---HHCTTSEEE---------SCHHHHHTCTTCSEEEE
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH---hhCCCCcEE---------CCHHHHhcCCCCCEEEE
Confidence 4689999999999996 8888888888885 58999998765 345454431 23566666 7999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVE 714 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~ 714 (1201)
|+|...|.+++..|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-|+|.
T Consensus 74 ~tp~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--~~~i~~g--~iG~i~ 149 (364)
T 3e82_A 74 ASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGI--RQVIEQG--TLGAVK 149 (364)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHH--HHHHHHT--TTCSEE
T ss_pred eCChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHH--HHHHHcC--CCcceE
Confidence 99999999999999999999999974 5677889999999999987754 3688886543 3344321 337898
Q ss_pred EEEeecCC
Q psy12817 715 SFVSYCGG 722 (1201)
Q Consensus 715 sf~s~cGG 722 (1201)
.+.++++.
T Consensus 150 ~~~~~~~~ 157 (364)
T 3e82_A 150 HFESHFDR 157 (364)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeec
Confidence 88876543
|
| >3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=99.07 E-value=5.1e-10 Score=126.56 Aligned_cols=144 Identities=18% Similarity=0.216 Sum_probs=108.1
Q ss_pred CCeEEEEcCchhHHH-HHH-HHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRP-LIE-YLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~-va~-~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
|+||+|||+|.+|+. ++. .+...++++|+ |+|+++++++. ++.++++... . +++++++ +.|+|+.
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~----~-----~~~~ll~~~~~D~V~i 71 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQ-APIYSHIHFT----S-----DLDEVLNDPDVKLVVV 71 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGG-SGGGTTCEEE----S-----CTHHHHTCTTEEEEEE
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHH-HHhcCCCceE----C-----CHHHHhcCCCCCEEEE
Confidence 679999999999985 777 44666788865 89999887743 4445455431 2 3455555 4899999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVE 714 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~ 714 (1201)
|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.. ..++|.+..+ ++.+++- .-|+|.
T Consensus 72 ~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--~~~i~~g--~iG~i~ 147 (345)
T 3f4l_A 72 CTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTA--KKAIESG--KLGEIV 147 (345)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHH--HHHHHHS--TTCSEE
T ss_pred cCChHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCHHHHHH--HHHHhcC--CCCCeE
Confidence 99999999999999999999999964 5678889999999999988754 3688876553 3333321 237899
Q ss_pred EEEeecCC
Q psy12817 715 SFVSYCGG 722 (1201)
Q Consensus 715 sf~s~cGG 722 (1201)
.+.+.++.
T Consensus 148 ~~~~~~~~ 155 (345)
T 3f4l_A 148 EVESHFDY 155 (345)
T ss_dssp EEEEECCC
T ss_pred EEEEEeec
Confidence 98887754
|
| >3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.07 E-value=2e-09 Score=121.95 Aligned_cols=142 Identities=22% Similarity=0.248 Sum_probs=109.1
Q ss_pred CCeEEEEcCchhHHH-HHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRP-LIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~-va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+.||+|||+|.+|+. ++..+.+.++++| .|+|+++++++ +.++++.. .++++++++ +.|+|+.|
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~---~~~~~~~~---------~~~~~~ll~~~~vD~V~i~ 74 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH---ADWPAIPV---------VSDPQMLFNDPSIDLIVIP 74 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH---TTCSSCCE---------ESCHHHHHHCSSCCEEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH---hhCCCCce---------ECCHHHHhcCCCCCEEEEe
Confidence 579999999999997 8888888888885 58999998876 34444432 123566665 49999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVES 715 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~s 715 (1201)
+|...|.+++.+|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-|+|..
T Consensus 75 tp~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--~~~i~~g--~iG~i~~ 150 (352)
T 3kux_A 75 TPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTL--KTLLAEG--SLGNVVY 150 (352)
T ss_dssp SCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHH--HHHHHHT--TTCSEEE
T ss_pred CChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHH--HHHHhcC--CCCceEE
Confidence 9999999999999999999999864 5678889999999999987764 3578876543 3334321 3378888
Q ss_pred EEeecCC
Q psy12817 716 FVSYCGG 722 (1201)
Q Consensus 716 f~s~cGG 722 (1201)
+.+.++.
T Consensus 151 ~~~~~~~ 157 (352)
T 3kux_A 151 FESHFDR 157 (352)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 8776543
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.7e-09 Score=121.65 Aligned_cols=146 Identities=15% Similarity=0.203 Sum_probs=112.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHH-hCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLH-RDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La-~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVI 638 (1201)
.+++||+|||+|.+|+.++..|. +.++++ +.|+|+++++++++++.+ ++.... . +++++++ ++|+|+
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~-g~~~~~---~-----~~~~~l~~~~~D~V~ 76 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNEL-GVETTY---T-----NYKDMIDTENIDAIF 76 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTT-CCSEEE---S-----CHHHHHTTSCCSEEE
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHh-CCCccc---C-----CHHHHhcCCCCCEEE
Confidence 45689999999999999999998 667788 568999999999988877 332211 1 3555665 699999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHc-CCEEEec--cccCchhHHHHHHHHHHHhhhcCCc
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASA-GITVLNE--VGLDPGIDHLLAMECIDAAHLNGGK 712 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeA-GVtil~e--~GlDPGIdhmlA~~~idei~~~ggk 712 (1201)
.|+|...|.+++..|+++|+|+++... ..++.++|.+.|+++ |+.++.+ ..++|++..+ .+.+++- .-|+
T Consensus 77 i~tp~~~h~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~--~~~i~~g--~iG~ 152 (346)
T 3cea_A 77 IVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYA--KKIVDNG--DIGK 152 (346)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHH--HHHHHTT--TTCS
T ss_pred EeCChHhHHHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHH--HHHHHcC--CCCC
Confidence 999999999999999999999999753 456788899999999 9988754 5688876554 2333221 2378
Q ss_pred EEEEEeecC
Q psy12817 713 VESFVSYCG 721 (1201)
Q Consensus 713 V~sf~s~cG 721 (1201)
|..+..+..
T Consensus 153 i~~v~~~~~ 161 (346)
T 3cea_A 153 IIYMRGYGI 161 (346)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEec
Confidence 888776543
|
| >3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.04 E-value=7.5e-10 Score=126.13 Aligned_cols=182 Identities=16% Similarity=0.139 Sum_probs=120.7
Q ss_pred CCCeEEEEcCchhHHH-HHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 564 ESRNVLLLGAGYVSRP-LIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~-va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
++.||+|||+|.+|+. ++..|.+.++++| .|+|+++++ +++.++++... . +++++++ +.|+|+.
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~---~~~~~~~~~~~----~-----~~~~ll~~~~vD~V~i 71 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL---SKERYPQASIV----R-----SFKELTEDPEIDLIVV 71 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG---GGTTCTTSEEE----S-----CSHHHHTCTTCCEEEE
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH---HHHhCCCCceE----C-----CHHHHhcCCCCCEEEE
Confidence 4679999999999997 8888888888885 588999776 34556544431 2 3445555 4999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVE 714 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~ 714 (1201)
|+|...|.+++++|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-|+|.
T Consensus 72 ~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~--k~~i~~G--~iG~i~ 147 (362)
T 3fhl_A 72 NTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTV--RDILAKS--LLGRLV 147 (362)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHH--HHHHHTT--TTSSEE
T ss_pred eCChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEEecceeCHHHHHH--HHHHHcC--CCCCeE
Confidence 99999999999999999999999865 5678899999999999987754 3588876543 3333321 237888
Q ss_pred EEEeecCCCCCCCCCCCccccccccC-hHHHHHHh----ccceeeeeCCeEEEecC
Q psy12817 715 SFVSYCGGLPAPECSENPLRYKFSWS-PRGVLLNT----LSSAKYLQNSQVVDIPA 765 (1201)
Q Consensus 715 sf~s~cGGLPaPe~~~nPL~YkfSWS-p~gvL~a~----~~~A~~l~dG~~v~Vp~ 765 (1201)
.+.+.++... |....+.|+.. |. ..|++... .+.++|+-+ +...|.+
T Consensus 148 ~v~~~~~~~~-~~~~~~~w~~~--~~~ggG~l~d~g~H~id~~~~l~G-~~~~V~a 199 (362)
T 3fhl_A 148 EYESTFARYR-NFIKPNTWKET--GESGGGLTYNLGSHLIDQAIQLFG-MPEAVFA 199 (362)
T ss_dssp EEEEEEECBC-CC----------------CHHHHTHHHHHHHHHHHHC-CEEEEEE
T ss_pred EEEEEecccC-CCCCccccccC--CCCCCceeeeehhhHHHHHHHHhC-CCcEEEE
Confidence 8877554321 22122235432 22 23444432 344566655 6777654
|
| >2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.3e-09 Score=125.55 Aligned_cols=149 Identities=11% Similarity=0.172 Sum_probs=113.5
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc--CCc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR--SAD 635 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~--~~D 635 (1201)
+++||+|||+|.+|+.++..|.+.++++| .|+|+++++++++++.+ +..... +- + .++++++++ +.|
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~--~~-~--~~~~~~ll~~~~vD 93 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVF--GN-G--NDDYKNMLKDKNID 93 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEE--CS-S--TTTHHHHTTCTTCC
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCcee--cc-C--CCCHHHHhcCCCCC
Confidence 45799999999999999999988888884 68999999999887632 222221 10 1 235777776 589
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEe--ccccCchhHHHHHHHHHHHhhhcC
Q psy12817 636 LVVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLN--EVGLDPGIDHLLAMECIDAAHLNG 710 (1201)
Q Consensus 636 VVIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~--e~GlDPGIdhmlA~~~idei~~~g 710 (1201)
+|+.|+|...|.+++.+|+++|+|++++.. ..++.++|.+.|+++|+.++. ...++|++.. +.+.+++- .-
T Consensus 94 ~V~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~--~~~~i~~G--~i 169 (444)
T 2ixa_A 94 AVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPLMALENVCYRRDVMA--ILNMVRKG--MF 169 (444)
T ss_dssp EEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHH--HHHHHHTT--TT
T ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHH--HHHHHHcC--CC
Confidence 999999999999999999999999999864 467788999999999987664 4578888643 23333321 23
Q ss_pred CcEEEEEeecC
Q psy12817 711 GKVESFVSYCG 721 (1201)
Q Consensus 711 gkV~sf~s~cG 721 (1201)
|+|..+...+.
T Consensus 170 G~i~~v~~~~~ 180 (444)
T 2ixa_A 170 GELVHGTGGYQ 180 (444)
T ss_dssp CSEEEEEECCB
T ss_pred CCeEEEEEEEe
Confidence 78988886553
|
| >2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.8e-09 Score=121.36 Aligned_cols=143 Identities=15% Similarity=0.087 Sum_probs=108.7
Q ss_pred CCCeEEEEcCchhHH-HHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 564 ESRNVLLLGAGYVSR-PLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~-~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
+++||+|||+|.+|. .++..|.. ++++ +.|+|+++++++++++.++++.. . .+++++++ +.|+|+.
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~-~~~~lvav~d~~~~~~~~~a~~~~~~~~-----~----~~~~~ll~~~~~D~V~i 72 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLID-AGAELAGVFESDSDNRAKFTSLFPSVPF-----A----ASAEQLITDASIDLIAC 72 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHH-TTCEEEEEECSCTTSCHHHHHHSTTCCB-----C----SCHHHHHTCTTCCEEEE
T ss_pred CccEEEEECCChHHHHHhhhhhcC-CCcEEEEEeCCCHHHHHHHHHhcCCCcc-----c----CCHHHHhhCCCCCEEEE
Confidence 357999999999996 56777753 5788 46999999999999998854431 2 24666665 6899999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCch-hHHHHHHHHHHHhhhcCCcE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPG-IDHLLAMECIDAAHLNGGKV 713 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPG-IdhmlA~~~idei~~~ggkV 713 (1201)
|+|...|.+++..|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|. +..+ .+.+++- ..|+|
T Consensus 73 ~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~--~~~i~~g--~iG~i 148 (336)
T 2p2s_A 73 AVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFAVYFNERINVDSALFA--GELVQRG--EIGRV 148 (336)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHH--HHHHHTT--TTSSE
T ss_pred eCChhhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCcHHHHHH--HHHHhCC--CCCce
Confidence 99999999999999999999999864 4578889999999999988754 457775 5443 3333321 23788
Q ss_pred EEEEeec
Q psy12817 714 ESFVSYC 720 (1201)
Q Consensus 714 ~sf~s~c 720 (1201)
..+..++
T Consensus 149 ~~v~~~~ 155 (336)
T 2p2s_A 149 IQTMGVG 155 (336)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 8887653
|
| >1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=99.02 E-value=1.1e-09 Score=122.70 Aligned_cols=144 Identities=17% Similarity=0.180 Sum_probs=108.8
Q ss_pred CCeEEEEcCchhHH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSR-PLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~-~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|+||+|||+|.+|+ .+++.|.+.++++++|+|+++++++++++.+ ++... ..+ ..+.+ -.++|+|+.|+|.
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~-g~~~~---~~~-~~~~l---~~~~D~V~i~tp~ 73 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRY-RVSAT---CTD-YRDVL---QYGVDAVMIHAAT 73 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHT-TCCCC---CSS-TTGGG---GGCCSEEEECSCG
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHc-CCCcc---ccC-HHHHh---hcCCCEEEEECCc
Confidence 57999999999998 5999998877888779999999999999887 33311 122 12222 2589999999999
Q ss_pred cccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
..|.+++..|+++|+|+++... ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-|+|..+..
T Consensus 74 ~~h~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--~~~i~~g--~iG~i~~v~~ 149 (323)
T 1xea_A 74 DVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQH--LSELAQQ--ECGALRSLRW 149 (323)
T ss_dssp GGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHH--CHHHHHT--SCTTCSEEEE
T ss_pred hhHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHH--HHHHhcC--CcCCceEEEE
Confidence 9999999999999999998753 4567889999999999987754 4688986554 3333331 2366766655
Q ss_pred ec
Q psy12817 719 YC 720 (1201)
Q Consensus 719 ~c 720 (1201)
..
T Consensus 150 ~~ 151 (323)
T 1xea_A 150 EK 151 (323)
T ss_dssp EE
T ss_pred Ee
Confidence 43
|
| >3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.6e-09 Score=121.43 Aligned_cols=143 Identities=15% Similarity=0.150 Sum_probs=105.9
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-------ccCC
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-------VRSA 634 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-------I~~~ 634 (1201)
.|+||+|||+ |.+|+.++..+.+. +.+ +.|+|++.+++ ..++.++++... .| .+++.+. -.+.
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~-~~~~~~~~~~~~----~~--~~~ll~~~~~l~~~~~~v 73 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVG-LVDSFFPEAEFF----TE--PEAFEAYLEDLRDRGEGV 73 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG-GGGGTCTTCEEE----SC--HHHHHHHHHHHHHTTCCC
T ss_pred CceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHH-HHHhhCCCCcee----CC--HHHHHHHhhhhcccCCCC
Confidence 4899999999 78999999999886 456 67899998874 345555554432 22 3344322 1579
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhc
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLN 709 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ 709 (1201)
|+|+.|+|...|.+++++|+++|+|++++.. ..++.++|.+.|+++|+.++.. ..++|.+..+ .++-+.
T Consensus 74 D~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~------k~~i~~ 147 (312)
T 3o9z_A 74 DYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLAL------KERLGQ 147 (312)
T ss_dssp SEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHH------HHHHHT
T ss_pred cEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEEEeehhcCHHHHHH------HHHHHc
Confidence 9999999999999999999999999999864 5678899999999999987654 4677765443 222233
Q ss_pred CCcEEEEEeec
Q psy12817 710 GGKVESFVSYC 720 (1201)
Q Consensus 710 ggkV~sf~s~c 720 (1201)
||+|..+....
T Consensus 148 gG~i~~v~~~~ 158 (312)
T 3o9z_A 148 EKGAKDVVLTY 158 (312)
T ss_dssp CCSCEEEEEEE
T ss_pred CCCEEEEEEEE
Confidence 48888876544
|
| >3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A | Back alignment and structure |
|---|
Probab=99.01 E-value=1.9e-09 Score=122.77 Aligned_cols=143 Identities=20% Similarity=0.243 Sum_probs=108.5
Q ss_pred CCCeEEEEcCchhHHH-HHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 564 ESRNVLLLGAGYVSRP-LIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~-va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
++.||+|||+|.+|+. ++..|.+.++++| .|+|++.++ +++.++++... . +++++++ +.|+|+.
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~---~~~~~~~~~~~----~-----~~~~ll~~~~vD~V~i 71 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE---VKRDFPDAEVV----H-----ELEEITNDPAIELVIV 71 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH---HHHHCTTSEEE----S-----STHHHHTCTTCCEEEE
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH---HHhhCCCCceE----C-----CHHHHhcCCCCCEEEE
Confidence 4579999999999996 7888888778885 588999876 34556554431 2 3455555 6899999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVE 714 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~ 714 (1201)
|+|...|.+++++|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ ++.+++- .-|+|.
T Consensus 72 ~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~--k~~i~~g--~iG~i~ 147 (358)
T 3gdo_A 72 TTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTI--KKLISEG--SLEDIN 147 (358)
T ss_dssp CSCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHH--HHHHHTT--SSCSCC
T ss_pred cCCcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHH--HHHHhcC--CCCceE
Confidence 99999999999999999999999864 5678889999999999987754 3588876543 3333321 337888
Q ss_pred EEEeecCC
Q psy12817 715 SFVSYCGG 722 (1201)
Q Consensus 715 sf~s~cGG 722 (1201)
.+.+.++.
T Consensus 148 ~~~~~~~~ 155 (358)
T 3gdo_A 148 TYQVSYNR 155 (358)
T ss_dssp EEEEECCC
T ss_pred EEEEEEec
Confidence 88877654
|
| >3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum} | Back alignment and structure |
|---|
Probab=98.99 E-value=3e-09 Score=121.72 Aligned_cols=144 Identities=13% Similarity=0.149 Sum_probs=109.2
Q ss_pred CCCeEEEEc-CchhHHH-HH----HHHHhCCCCeE----------EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHH
Q psy12817 564 ESRNVLLLG-AGYVSRP-LI----EYLHRDENIHI----------TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNL 627 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~-va----~~La~~~~~~V----------tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L 627 (1201)
+++||+||| +|.+|+. ++ ..+.+.+++.+ .|+|+++++++++++.+ ++..+. .++
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~-~~~~~~--------~~~ 75 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRF-NIARWT--------TDL 75 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHT-TCCCEE--------SCH
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHh-CCCccc--------CCH
Confidence 357999999 9999998 77 77776665443 49999999999999988 343221 235
Q ss_pred Hhhcc--CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHH
Q psy12817 628 SGLVR--SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAM 700 (1201)
Q Consensus 628 ~elI~--~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~ 700 (1201)
+++++ +.|+|+.|+|...|.+++++|+++|+|++++.. ..++.++|.+.|+++|+.++.. ..++|.+..+.
T Consensus 76 ~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~-- 153 (383)
T 3oqb_A 76 DAALADKNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTVQDKLFLPGLKKIA-- 153 (383)
T ss_dssp HHHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHH--
T ss_pred HHHhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCHHHHHHH--
Confidence 55664 489999999999999999999999999999864 5678899999999999977654 46888765432
Q ss_pred HHHHHhhhcCCcEEEEEeec
Q psy12817 701 ECIDAAHLNGGKVESFVSYC 720 (1201)
Q Consensus 701 ~~idei~~~ggkV~sf~s~c 720 (1201)
+.+++- ..|+|..+...+
T Consensus 154 ~~i~~g--~iG~i~~~~~~~ 171 (383)
T 3oqb_A 154 FLRDSG--FFGRILSVRGEF 171 (383)
T ss_dssp HHHHTT--TTSSEEEEEEEE
T ss_pred HHHHcC--CCCCcEEEEEEe
Confidence 222221 237888887654
|
| >3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.7e-09 Score=120.77 Aligned_cols=139 Identities=18% Similarity=0.208 Sum_probs=108.7
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+++||+|||+|.+|+.+++.|.+.++++ +.++|+++++++++++. +.. .. +++++++ ++|+|+.|
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~---~~~----~~-----~~~~~l~~~~~D~V~i~ 76 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG---CVI----ES-----DWRSVVSAPEVEAVIIA 76 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT---CEE----ES-----STHHHHTCTTCCEEEEE
T ss_pred CcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh---Ccc----cC-----CHHHHhhCCCCCEEEEe
Confidence 4679999999999999999999877787 55999999988766543 221 12 2445554 79999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhhcCCcEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHLNGGKVES 715 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~~ggkV~s 715 (1201)
+|...|.++++.|+++|+|+++... ..++.++|.+.|+++|+.++.+ ..++|.+..+ .+.++++ |+|..
T Consensus 77 tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~--~~~i~~l----G~i~~ 150 (315)
T 3c1a_A 77 TPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLFNPAWEAL--KADLTSI----GPILA 150 (315)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGGCHHHHHH--HHTHHHH----CSEEE
T ss_pred CChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhcCHHHHHH--HHHHHHc----CCeEE
Confidence 9999999999999999999998853 4567889999999999987654 5789987664 3344433 78888
Q ss_pred EEeec
Q psy12817 716 FVSYC 720 (1201)
Q Consensus 716 f~s~c 720 (1201)
+...+
T Consensus 151 v~~~~ 155 (315)
T 3c1a_A 151 VRSEA 155 (315)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77654
|
| >3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.97 E-value=3.5e-09 Score=120.84 Aligned_cols=141 Identities=13% Similarity=0.100 Sum_probs=107.0
Q ss_pred CCeEEEEcCchhHH-HHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSR-PLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~-~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+.||+|||+|.++. .++..+. .++++ +.|+|+++++++++++.++.... ..+++++++ +.|+|+.|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~~~~~a~~~a~~~~~~~~---------~~~~~~ll~~~~vD~V~I~ 95 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEKDDALAAEFSAVYADARR---------IATAEEILEDENIGLIVSA 95 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECSCHHHHHHHHHHSSSCCE---------ESCHHHHHTCTTCCEEEEC
T ss_pred CcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcCCHHHHHHHHHHcCCCcc---------cCCHHHHhcCCCCCEEEEe
Confidence 47999999999985 4566665 46788 56899999999999998853332 124566665 48999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEecc--ccC-chhHHHHHHHHHHHhhhcCCcEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNEV--GLD-PGIDHLLAMECIDAAHLNGGKVE 714 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e~--GlD-PGIdhmlA~~~idei~~~ggkV~ 714 (1201)
+|...|.+++++|+++|+|++++.. ..++.++|.+.|+++|+.++.+. .++ |.+..+ ++.+++- .-|+|.
T Consensus 96 tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~~~p~~~~~--k~~i~~g--~iG~i~ 171 (361)
T 3u3x_A 96 AVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHFESPATVKA--GELVAAG--AIGEVV 171 (361)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEECHHHHTCHHHHHH--HHHHHTT--TTSSEE
T ss_pred CChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEechHhhCCHHHHHH--HHHHHcC--CCCCeE
Confidence 9999999999999999999999865 56788899999999999887653 464 765443 2333321 237888
Q ss_pred EEEee
Q psy12817 715 SFVSY 719 (1201)
Q Consensus 715 sf~s~ 719 (1201)
.+...
T Consensus 172 ~~~~~ 176 (361)
T 3u3x_A 172 HIVGL 176 (361)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87654
|
| >1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=98.96 E-value=2.6e-09 Score=119.26 Aligned_cols=123 Identities=15% Similarity=0.154 Sum_probs=100.0
Q ss_pred CCeEEEEcCchhHHH-HHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRP-LIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~-va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
++||+|||+|.+|+. ++..|.+.++++++ |+|++.++++++++.+ ++. +.+ +.+.+ ..++|+|+.|+|
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~-g~~-----~~~-~~~~l---~~~~D~V~i~tp 74 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW-RIP-----YAD-SLSSL---AASCDAVFVHSS 74 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH-TCC-----BCS-SHHHH---HTTCSEEEECSC
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc-CCC-----ccC-cHHHh---hcCCCEEEEeCC
Confidence 579999999999996 88988887788865 9999999999988877 343 222 13444 358999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHH
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHL 697 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhm 697 (1201)
...|.+++..|+++|+|+++... ..++.++|.+.|+++|+.++.+ ..++|.+..+
T Consensus 75 ~~~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~ 134 (319)
T 1tlt_A 75 TASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFAPLYGEL 134 (319)
T ss_dssp TTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCHHHHHH
T ss_pred chhHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHH
Confidence 99999999999999999999853 5677889999999999987754 5688876543
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.95 E-value=6.4e-10 Score=124.29 Aligned_cols=139 Identities=17% Similarity=0.224 Sum_probs=104.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|++++..|.+.+-.+|+|++|+.++++++++.+..... ++.+ .+.+.+.++++|+||||+|
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~---~~~~--~~~~~~~~~~aDivIn~t~ 213 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS---AYFS--LAEAETRLAEYDIIINTTS 213 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC---CEEC--HHHHHHTGGGCSEEEECSC
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC---ceee--HHHHHhhhccCCEEEECCC
Confidence 3468999999999999999999987544899999999999999987732100 1112 3467778889999999999
Q ss_pred CcccH-----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEE
Q psy12817 643 YNLHH-----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFV 717 (1201)
Q Consensus 643 ~~~h~-----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~ 717 (1201)
..+++ .+...+++.+..++|++|.+... .|.+.|+++|+.++++++ |+..+.+. +|+
T Consensus 214 ~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~T-~ll~~A~~~G~~~v~Gl~-------MLv~Qa~~----------af~ 275 (297)
T 2egg_A 214 VGMHPRVEVQPLSLERLRPGVIVSDIIYNPLET-KWLKEAKARGARVQNGVG-------MLVYQGAL----------AFE 275 (297)
T ss_dssp TTCSSCCSCCSSCCTTCCTTCEEEECCCSSSSC-HHHHHHHHTTCEEECSHH-------HHHHHHHH----------HHH
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCCC-HHHHHHHHCcCEEECCHH-------HHHHHHHH----------HHH
Confidence 77652 23346678899999999964333 477889999999988654 55555444 356
Q ss_pred eecCCCC
Q psy12817 718 SYCGGLP 724 (1201)
Q Consensus 718 s~cGGLP 724 (1201)
.|+|..|
T Consensus 276 ~w~g~~~ 282 (297)
T 2egg_A 276 KWTGQWP 282 (297)
T ss_dssp HHHSCCC
T ss_pred HHhCCCC
Confidence 7998754
|
| >3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.95 E-value=3.6e-09 Score=118.96 Aligned_cols=146 Identities=12% Similarity=0.045 Sum_probs=106.5
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh--------ccC
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL--------VRS 633 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el--------I~~ 633 (1201)
.|+||+|||+ |.+|..++..|.+. +.+ +.|+|++.+++ .+++.++++... .| .+++.+. -.+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~-~~~~~~~~~~~~----~~--~~~ll~~~~~l~~~~~~~ 73 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVG-IIDSISPQSEFF----TE--FEFFLDHASNLKRDSATA 73 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG-GGGGTCTTCEEE----SS--HHHHHHHHHHHTTSTTTS
T ss_pred CceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHH-HHHhhCCCCcEE----CC--HHHHHHhhhhhhhccCCC
Confidence 4899999999 78999999999886 556 67889998764 445556555432 22 3333321 146
Q ss_pred CcEEEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHhhh
Q psy12817 634 ADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAAHL 708 (1201)
Q Consensus 634 ~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei~~ 708 (1201)
.|+|+.|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.. ..++|.+..+ .+.+++-
T Consensus 74 vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~--k~~i~~g-- 149 (318)
T 3oa2_A 74 LDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIAL--KDKVARE-- 149 (318)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHH--HHHHHHS--
T ss_pred CcEEEECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEEEEEhhhcCHHHHHH--HHHHhcC--
Confidence 99999999999999999999999999999965 5678899999999999987654 4688876554 2333321
Q ss_pred cCCcEEEEEeecC
Q psy12817 709 NGGKVESFVSYCG 721 (1201)
Q Consensus 709 ~ggkV~sf~s~cG 721 (1201)
.-|+|..+.....
T Consensus 150 ~iG~i~~v~~~~~ 162 (318)
T 3oa2_A 150 KSPHKYEVDLTYI 162 (318)
T ss_dssp -CSSCEEEEEEEE
T ss_pred CCCceEEEEEEEE
Confidence 2267877765543
|
| >4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=3.4e-09 Score=122.13 Aligned_cols=126 Identities=11% Similarity=0.171 Sum_probs=100.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCC-CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDE-NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~-~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..+.||+|+|+| .|+..++.+.+.+ +++ +.|+||+.++++++++++ ++.. . + ++++++++.|+|+.+
T Consensus 5 ~~~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~-gv~~-~---~-----~~~~l~~~~D~v~i~ 73 (372)
T 4gmf_A 5 SPKQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAF-GIPL-Y---T-----SPEQITGMPDIACIV 73 (372)
T ss_dssp --CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHT-TCCE-E---S-----SGGGCCSCCSEEEEC
T ss_pred CCCCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHh-CCCE-E---C-----CHHHHhcCCCEEEEE
Confidence 346899999999 5999998887765 577 558999999999999998 6653 1 2 355677899999999
Q ss_pred CCCccc----HHHHHHHHHcCCeEEEccCC-hHHHHHHHHHHHHcCCEEEecc--ccCchhHHHHH
Q psy12817 641 LPYNLH----HHVAEFCIQHGKNLVTASYL-SPEMMALHERAASAGITVLNEV--GLDPGIDHLLA 699 (1201)
Q Consensus 641 lP~~~h----~~VakacIeaGkh~VD~Syv-s~e~~eLde~AkeAGVtil~e~--GlDPGIdhmlA 699 (1201)
+|...| .+++++|+++|+|++++..+ .++.++|.+.|+++|+.++.+. .+.|-+-.++.
T Consensus 74 ~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v~~~yr~~p~vr~~i~ 139 (372)
T 4gmf_A 74 VRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYWINTFYPHTRAGRTWLR 139 (372)
T ss_dssp CC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEEEECSGGGSHHHHHHHH
T ss_pred CCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEEEcCcccCCHHHHHHHH
Confidence 999888 89999999999999999874 4678899999999999988653 46676665543
|
| >3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A | Back alignment and structure |
|---|
Probab=98.89 E-value=6.8e-09 Score=121.59 Aligned_cols=146 Identities=16% Similarity=0.126 Sum_probs=113.6
Q ss_pred CCeEEEEcC----chhHHHHHHHHHhC-CCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcE
Q psy12817 565 SRNVLLLGA----GYVSRPLIEYLHRD-ENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADL 636 (1201)
Q Consensus 565 mkKVLILGA----G~VG~~va~~La~~-~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DV 636 (1201)
++||+|||+ |.+|+.++..|.+. ++++| .|+|++.++++++++.+ ++..+ .+ ..+++++++ +.|+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~-g~~~~--~~----~~~~~~ll~~~~vD~ 92 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRL-KLSNA--TA----FPTLESFASSSTIDM 92 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHT-TCTTC--EE----ESSHHHHHHCSSCSE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc-CCCcc--ee----eCCHHHHhcCCCCCE
Confidence 479999999 99999999999988 78885 68999999999999887 33200 01 123566665 6999
Q ss_pred EEEcCCCcccHHHHHHHHHcC------CeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHH
Q psy12817 637 VVSLLPYNLHHHVAEFCIQHG------KNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDA 705 (1201)
Q Consensus 637 VIs~lP~~~h~~VakacIeaG------kh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~ide 705 (1201)
|+.|+|...|.+++++|+++| +|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..+ .+.+++
T Consensus 93 V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~--k~~i~~ 170 (438)
T 3btv_A 93 IVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRA--KELISQ 170 (438)
T ss_dssp EEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEECGGGGCHHHHHH--HHHHHT
T ss_pred EEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEecccccCHHHHHH--HHHHHc
Confidence 999999999999999999999 99999864 5678899999999999987754 5688887654 333332
Q ss_pred hhhcCCcEEEEEeecC
Q psy12817 706 AHLNGGKVESFVSYCG 721 (1201)
Q Consensus 706 i~~~ggkV~sf~s~cG 721 (1201)
- ..|+|..+..++.
T Consensus 171 G--~iG~i~~v~~~~~ 184 (438)
T 3btv_A 171 G--YIGDINSIEIAGN 184 (438)
T ss_dssp T--TTCSEEEEEEEEE
T ss_pred C--CCCCcEEEEEEEc
Confidence 1 2378988877653
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=3.5e-09 Score=119.55 Aligned_cols=141 Identities=14% Similarity=0.173 Sum_probs=107.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC---HHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL---KEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~---~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.+.++++|+|+|.+|++++..|++.+--+|+|++|+ .++++++++++. ++.....+..+ .+.+.+.+.++|+
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~--~~~l~~~l~~aDi 229 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED--HEQLRKEIAESVI 229 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHHHTCSE
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch--HHHHHhhhcCCCE
Confidence 456899999999999999999998754489999999 999999887652 23344556665 5678888899999
Q ss_pred EEEcCCCcccHH-----H-HHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcC
Q psy12817 637 VVSLLPYNLHHH-----V-AEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNG 710 (1201)
Q Consensus 637 VIs~lP~~~h~~-----V-akacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~g 710 (1201)
||||+|..+++. + ....++.+..++|+.|.+.++. |.++|+++|+.++++.+ |+..+.+.+
T Consensus 230 IINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T~-ll~~A~~~G~~~~~Gl~-------MLv~Qa~~a----- 296 (315)
T 3tnl_A 230 FTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTR-LLEIAEEQGCQTLNGLG-------MMLWQGAKA----- 296 (315)
T ss_dssp EEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSCH-HHHHHHHTTCEEECSHH-------HHHHHHHHH-----
T ss_pred EEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCCH-HHHHHHHCCCeEeCcHH-------HHHHHHHHH-----
Confidence 999999776532 3 3445677778899999765544 45889999999998766 566655444
Q ss_pred CcEEEEEeecCCC
Q psy12817 711 GKVESFVSYCGGL 723 (1201)
Q Consensus 711 gkV~sf~s~cGGL 723 (1201)
|+.|+|--
T Consensus 297 -----f~lwtG~~ 304 (315)
T 3tnl_A 297 -----FEIWTHKE 304 (315)
T ss_dssp -----HHHHHSSC
T ss_pred -----HHHHhCCC
Confidence 45788753
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.87 E-value=2.5e-09 Score=119.04 Aligned_cols=139 Identities=19% Similarity=0.273 Sum_probs=104.2
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC----CeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG----RVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~----~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.+.++++|+|+|.+|+.++..|.+.+--+|+|++|+.++++++++.+. ++.....+ .+++.+.++++|+||
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~-----~~~l~~~l~~~DiVI 199 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD-----ARGIEDVIAAADGVV 199 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC-----STTHHHHHHHSSEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC-----HHHHHHHHhcCCEEE
Confidence 456899999999999999999998754479999999999999887652 23333332 235777888999999
Q ss_pred EcCCCcccH----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEE
Q psy12817 639 SLLPYNLHH----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVE 714 (1201)
Q Consensus 639 s~lP~~~h~----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~ 714 (1201)
||+|..+++ ++...+++.+..++|+.|.+.++ .|.++|+++|+.++++.+ |+..+.+.+
T Consensus 200 naTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~T-~ll~~A~~~G~~~~~Gl~-------MLv~Qa~~~--------- 262 (283)
T 3jyo_A 200 NATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIET-ELLKAARALGCETLDGTR-------MAIHQAVDA--------- 262 (283)
T ss_dssp ECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSSSSC-HHHHHHHHHTCCEECTHH-------HHHHHHHHH---------
T ss_pred ECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCCCCC-HHHHHHHHCcCeEeCcHH-------HHHHHHHHH---------
Confidence 999977653 24455677888899999975443 455889999999988666 566655444
Q ss_pred EEEeecCCCC
Q psy12817 715 SFVSYCGGLP 724 (1201)
Q Consensus 715 sf~s~cGGLP 724 (1201)
|+.|+|--|
T Consensus 263 -f~lwtg~~~ 271 (283)
T 3jyo_A 263 -FRLFTGLEP 271 (283)
T ss_dssp -HHHHHSCCC
T ss_pred -HHHHcCCCC
Confidence 457887543
|
| >2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A | Back alignment and structure |
|---|
Probab=98.87 E-value=2.1e-08 Score=118.98 Aligned_cols=144 Identities=14% Similarity=0.141 Sum_probs=112.3
Q ss_pred CCCeEEEEcC----chhHHHHHHHHHhC-CCCeE-EEEeCCHHHHHHHHHHcCCee--EEEeecCCCCchHHHhhcc--C
Q psy12817 564 ESRNVLLLGA----GYVSRPLIEYLHRD-ENIHI-TLGSLLKEDIDKVTNEFGRVE--ATLIDVNNGGSDNLSGLVR--S 633 (1201)
Q Consensus 564 ~mkKVLILGA----G~VG~~va~~La~~-~~~~V-tVadR~~ekAe~La~~~~~v~--~v~lDV~D~~~e~L~elI~--~ 633 (1201)
++.||+|||+ |.+|+.++..|.+. ++++| .|+|++.++++++++.+ ++. ... .+++++++ +
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~-g~~~~~~~--------~d~~ell~~~~ 108 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQL-QLKHATGF--------DSLESFAQYKD 108 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHT-TCTTCEEE--------SCHHHHHHCTT
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc-CCCcceee--------CCHHHHhcCCC
Confidence 3579999999 99999999999887 78885 58999999999999887 332 111 23556664 6
Q ss_pred CcEEEEcCCCcccHHHHHHHHHcC------CeEEEccC---ChHHHHHHHHHHHHcC-CEEEec--cccCchhHHHHHHH
Q psy12817 634 ADLVVSLLPYNLHHHVAEFCIQHG------KNLVTASY---LSPEMMALHERAASAG-ITVLNE--VGLDPGIDHLLAME 701 (1201)
Q Consensus 634 ~DVVIs~lP~~~h~~VakacIeaG------kh~VD~Sy---vs~e~~eLde~AkeAG-Vtil~e--~GlDPGIdhmlA~~ 701 (1201)
+|+|+.|+|...|.+++++|+++| +|++++.. ..++.++|.+.|+++| +.++.+ ..++|.+..+ ++
T Consensus 109 vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~--k~ 186 (479)
T 2nvw_A 109 IDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTIICLQGRKSPYIVRA--KE 186 (479)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEEEECGGGGCHHHHHH--HH
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEEeccccCHHHHHH--HH
Confidence 999999999999999999999999 99999864 4567889999999999 887653 5688876553 33
Q ss_pred HHHHhhhcCCcEEEEEeec
Q psy12817 702 CIDAAHLNGGKVESFVSYC 720 (1201)
Q Consensus 702 ~idei~~~ggkV~sf~s~c 720 (1201)
.+++- .-|+|..+...+
T Consensus 187 ~i~~G--~iG~i~~v~~~~ 203 (479)
T 2nvw_A 187 LISEG--CIGDINSIEISG 203 (479)
T ss_dssp HHHTT--TTCSEEEEEEEE
T ss_pred HHHcC--CCCCeEEEEEEe
Confidence 33321 237888887654
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.86 E-value=2.8e-09 Score=117.86 Aligned_cols=130 Identities=12% Similarity=0.229 Sum_probs=100.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
.++|+|||+|.+|++++..|.+.+-.+|+|++|+.++++++++.++ .. +.+ .+. +.++|+||||+|..
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~-~~-----~~~----~~~--~~~~DivInaTp~g 186 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG-YA-----YIN----SLE--NQQADILVNVTSIG 186 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT-CE-----EES----CCT--TCCCSEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC-Cc-----cch----hhh--cccCCEEEECCCCC
Confidence 4799999999999999999998754579999999999999998873 21 111 111 35899999999987
Q ss_pred ccH-------HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEE
Q psy12817 645 LHH-------HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFV 717 (1201)
Q Consensus 645 ~h~-------~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~ 717 (1201)
+++ ++...++..+..++|+.|.+.+. .|.+.|+++|+.++++.+ |+..+.+. +|+
T Consensus 187 m~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~T-~ll~~A~~~G~~~i~Gl~-------MLv~Qa~~----------~f~ 248 (271)
T 1npy_A 187 MKGGKEEMDLAFPKAFIDNASVAFDVVAMPVET-PFIRYAQARGKQTISGAA-------VIVLQAVE----------QFE 248 (271)
T ss_dssp CTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSC-HHHHHHHHTTCEEECHHH-------HHHHHHHH----------HHH
T ss_pred ccCccccCCCCCCHHHcCCCCEEEEeecCCCCC-HHHHHHHHCCCEEECCHH-------HHHHHHHH----------HHH
Confidence 753 24457888899999999965544 677899999999988666 55555443 456
Q ss_pred eecCCCC
Q psy12817 718 SYCGGLP 724 (1201)
Q Consensus 718 s~cGGLP 724 (1201)
.|+|..|
T Consensus 249 lw~g~~~ 255 (271)
T 1npy_A 249 LYTHQRP 255 (271)
T ss_dssp HHHSCCC
T ss_pred HHhCCCC
Confidence 8998654
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.82 E-value=6.2e-09 Score=115.86 Aligned_cols=132 Identities=18% Similarity=0.243 Sum_probs=101.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++++|+|+|.+|++++..|.+.+--+|+|++|+.++++++++.+ .. .+ .+++.+ + ++|+||||+|
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~---~~--~~-----~~~l~~-l-~~DivInaTp 187 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF---KV--IS-----YDELSN-L-KGDVIINCTP 187 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS---EE--EE-----HHHHTT-C-CCSEEEECSS
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc---Cc--cc-----HHHHHh-c-cCCEEEECCc
Confidence 35689999999999999999999875448999999999999998765 22 12 334555 5 8999999999
Q ss_pred CcccH-----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEE
Q psy12817 643 YNLHH-----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFV 717 (1201)
Q Consensus 643 ~~~h~-----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~ 717 (1201)
..+++ ++...+++.+..++|+.|.+.++ .|.++|+++|+.++++.+ |+..+.+.+ |+
T Consensus 188 ~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T-~ll~~A~~~G~~~~~Gl~-------MLv~Qa~~~----------f~ 249 (282)
T 3fbt_A 188 KGMYPKEGESPVDKEVVAKFSSAVDLIYNPVET-LFLKYARESGVKAVNGLY-------MLVSQAAAS----------EE 249 (282)
T ss_dssp TTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSC-HHHHHHHHTTCEEECSHH-------HHHHHHHHH----------HH
T ss_pred cCccCCCccCCCCHHHcCCCCEEEEEeeCCCCC-HHHHHHHHCcCeEeCcHH-------HHHHHHHHH----------HH
Confidence 87653 25567788899999999976543 455889999999998666 566665544 45
Q ss_pred eecCCCC
Q psy12817 718 SYCGGLP 724 (1201)
Q Consensus 718 s~cGGLP 724 (1201)
.|+|--|
T Consensus 250 lwtg~~~ 256 (282)
T 3fbt_A 250 IWNDISI 256 (282)
T ss_dssp HHHTCCC
T ss_pred HHcCCCC
Confidence 7887543
|
| >3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=2.4e-08 Score=117.34 Aligned_cols=144 Identities=19% Similarity=0.201 Sum_probs=107.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHc-C---CeeEE-------------EeecCCCCc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEF-G---RVEAT-------------LIDVNNGGS 624 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~-~---~v~~v-------------~lDV~D~~~ 624 (1201)
.++.||+|||+|.+|+.++..+.+.++++ +.|+|++.+++++.++++ . .+... ..-+.
T Consensus 21 ~k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~---- 96 (446)
T 3upl_A 21 GKPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVT---- 96 (446)
T ss_dssp TCCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEE----
T ss_pred CCceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEE----
Confidence 45689999999999999999998888888 568999999999887653 2 01000 00112
Q ss_pred hHHHhhcc--CCcEEEEcCCC-cccHHHHHHHHHcCCeEEEccC--ChHHHHHHHHHHHHcCCEEEeccccCchhHHHHH
Q psy12817 625 DNLSGLVR--SADLVVSLLPY-NLHHHVAEFCIQHGKNLVTASY--LSPEMMALHERAASAGITVLNEVGLDPGIDHLLA 699 (1201)
Q Consensus 625 e~L~elI~--~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~Sy--vs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA 699 (1201)
++++++++ +.|+|+.|+|. ..|.+++..|+++|||+++.+- ...+..+|.+.|+++|+.+....|-.|+. .
T Consensus 97 ~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~~~~gdqp~~----~ 172 (446)
T 3upl_A 97 DDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYSLGAGDEPSS----C 172 (446)
T ss_dssp SCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEEECTTSHHHH----H
T ss_pred CCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeeeecCCcchHH----H
Confidence 24566665 58999999986 4789999999999999998652 23456789999999999998888876763 4
Q ss_pred HHHHHHhhhcCCcEE
Q psy12817 700 MECIDAAHLNGGKVE 714 (1201)
Q Consensus 700 ~~~idei~~~ggkV~ 714 (1201)
+++++..+..|-++.
T Consensus 173 ~eLv~~a~~~G~~~v 187 (446)
T 3upl_A 173 MELIEFVSALGYEVV 187 (446)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhCCCeEE
Confidence 566666665554443
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=5e-09 Score=115.38 Aligned_cols=136 Identities=21% Similarity=0.314 Sum_probs=97.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe-eEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV-EATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v-~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.++|+|+|+|.+|++++..|.+.+ .+|+|++|+.++++++++.++.. .....|+ +++.+ .++|+|||++
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~-----~~~~~--~~~DivIn~t 188 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSM-----DSIPL--QTYDLVINAT 188 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEG-----GGCCC--SCCSEEEECC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHccccCCeEEeeH-----HHhcc--CCCCEEEECC
Confidence 34689999999999999999999886 79999999999999998776321 1111222 11111 3899999999
Q ss_pred CCcccHH---HHHHHHHcCCeEEEccCChHH-HHHHHHHHHHcCCE-EEeccccCchhHHHHHHHHHHHhhhcCCcEEEE
Q psy12817 642 PYNLHHH---VAEFCIQHGKNLVTASYLSPE-MMALHERAASAGIT-VLNEVGLDPGIDHLLAMECIDAAHLNGGKVESF 716 (1201)
Q Consensus 642 P~~~h~~---VakacIeaGkh~VD~Syvs~e-~~eLde~AkeAGVt-il~e~GlDPGIdhmlA~~~idei~~~ggkV~sf 716 (1201)
|..++.. +...+++.+..++|++|.+.. .. +.+.|+++|+. ++++.+ |+..+.+. +|
T Consensus 189 ~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~~t~-ll~~a~~~G~~~~v~G~~-------mLv~Qa~~----------af 250 (272)
T 1p77_A 189 SAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTP-FIALCKSLGLTNVSDGFG-------MLVAQAAH----------SF 250 (272)
T ss_dssp CC-------CCCHHHHHHCSCEEESCCCTTSCCH-HHHHHHHTTCCCEECSHH-------HHHHHHHH----------HH
T ss_pred CCCCCCCCCCCCHHHcCCCCEEEEeeCCCCcCCH-HHHHHHHcCCCEeeCCHH-------HHHHHHHH----------HH
Confidence 9876543 335678889999999997655 44 56889999998 887533 55555443 45
Q ss_pred EeecCCCC
Q psy12817 717 VSYCGGLP 724 (1201)
Q Consensus 717 ~s~cGGLP 724 (1201)
..|+|..|
T Consensus 251 ~~w~g~~~ 258 (272)
T 1p77_A 251 HLWRGVMP 258 (272)
T ss_dssp HHHHSCCC
T ss_pred HHHhCCCC
Confidence 68998765
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.79 E-value=6.2e-09 Score=115.21 Aligned_cols=135 Identities=21% Similarity=0.232 Sum_probs=100.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC--eeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR--VEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~--v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.+.++++|+|+|.+|++++..|.+.+-.+|+|++|+.++++++++.+.. +.. .+. +++.+ .++|+||||
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~--~~~-----~~l~~--~~~DivIna 188 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRI--SRY-----EALEG--QSFDIVVNA 188 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEE--ECS-----GGGTT--CCCSEEEEC
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeE--eeH-----HHhcc--cCCCEEEEC
Confidence 3568999999999999999999987545899999999999999988753 332 222 23332 689999999
Q ss_pred CCCcccH---HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE-EEeccccCchhHHHHHHHHHHHhhhcCCcEEEE
Q psy12817 641 LPYNLHH---HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT-VLNEVGLDPGIDHLLAMECIDAAHLNGGKVESF 716 (1201)
Q Consensus 641 lP~~~h~---~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt-il~e~GlDPGIdhmlA~~~idei~~~ggkV~sf 716 (1201)
+|..++. .+-...++.+..++|+.|.+..+. +.++|+++|+. ++++.+ |+..+.+.+ |
T Consensus 189 Tp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T~-ll~~A~~~G~~~~~~Gl~-------ML~~Qa~~~----------f 250 (272)
T 3pwz_A 189 TSASLTADLPPLPADVLGEAALAYELAYGKGLTP-FLRLAREQGQARLADGVG-------MLVEQAAEA----------F 250 (272)
T ss_dssp SSGGGGTCCCCCCGGGGTTCSEEEESSCSCCSCH-HHHHHHHHSCCEEECTHH-------HHHHHHHHH----------H
T ss_pred CCCCCCCCCCCCCHHHhCcCCEEEEeecCCCCCH-HHHHHHHCCCCEEECCHH-------HHHHHHHHH----------H
Confidence 9987642 233456778888999999754444 66789999997 888666 566655444 4
Q ss_pred EeecCCCC
Q psy12817 717 VSYCGGLP 724 (1201)
Q Consensus 717 ~s~cGGLP 724 (1201)
+.|+|-.|
T Consensus 251 ~lwtg~~~ 258 (272)
T 3pwz_A 251 AWWRGVRP 258 (272)
T ss_dssp HHHHSCCC
T ss_pred HHHhCCCC
Confidence 67888654
|
| >2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.4e-08 Score=109.07 Aligned_cols=112 Identities=22% Similarity=0.297 Sum_probs=90.3
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-cCCcEEEEcCCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-RSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-~~~DVVIs~lP~ 643 (1201)
+||+|||+|.||+.+++.|.+ +++++ .++|++. ++++ ... ++++++ .++|+|+.|+|.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~-~g~~lv~v~d~~~-~~~~-------------~~~-----~~~~l~~~~~DvVv~~~~~ 60 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER-NGFEIAAILDVRG-EHEK-------------MVR-----GIDEFLQREMDVAVEAASQ 60 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEECSSC-CCTT-------------EES-----SHHHHTTSCCSEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhc-CCCEEEEEEecCc-chhh-------------hcC-----CHHHHhcCCCCEEEECCCH
Confidence 489999999999999999984 67886 6899884 3221 112 355566 689999999999
Q ss_pred cccHHHHHHHHHcCCeEEEccCCh---HHH-HHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASYLS---PEM-MALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Syvs---~e~-~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
..|.+++..|+++|+|+++.+... ++. ++|.+.++++|+.++...|+..|+..+
T Consensus 61 ~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~~~ 118 (236)
T 2dc1_A 61 QAVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAI 118 (236)
T ss_dssp HHHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChHHH
Confidence 999999999999999999997533 455 789999999999988788888887554
|
| >3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.3e-08 Score=112.74 Aligned_cols=142 Identities=13% Similarity=0.148 Sum_probs=101.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCH-HHHHHHH---HHcCCeeEEEeecCCCCchHHHhhcc--CCcEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLK-EDIDKVT---NEFGRVEATLIDVNNGGSDNLSGLVR--SADLV 637 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~-ekAe~La---~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVV 637 (1201)
|+||+|||+|.++..+++.| .++++| .|+|+++ +++++++ +++ ++... +. ++++++++ +.|+|
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~~~-~~~~~---~~----~~~~~ll~~~~vD~V 71 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAISEM-NIKPK---KY----NNWWEMLEKEKPDIL 71 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHHTT-TCCCE---EC----SSHHHHHHHHCCSEE
T ss_pred ceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHHHc-CCCCc---cc----CCHHHHhcCCCCCEE
Confidence 67999999999998877777 667884 5789887 3444443 334 22111 11 23555554 59999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCE--EEec--cccCchhHHHHHHHHHHHhhhcC
Q psy12817 638 VSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGIT--VLNE--VGLDPGIDHLLAMECIDAAHLNG 710 (1201)
Q Consensus 638 Is~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVt--il~e--~GlDPGIdhmlA~~~idei~~~g 710 (1201)
+.|+|...|.+++++|+++|+|++++.. ..++.++|.+.|+++|+. ++.+ ..++|.+..+ ++.+++- .-
T Consensus 72 ~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~--k~~i~~g--~i 147 (337)
T 3ip3_A 72 VINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTA--KKLVSEG--AV 147 (337)
T ss_dssp EECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHH--HHHHHHT--TT
T ss_pred EEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEecccccCCHHHHHH--HHHHhcC--Cc
Confidence 9999999999999999999999999975 456889999999999987 5443 5688876543 3334321 23
Q ss_pred CcEEEEEeec
Q psy12817 711 GKVESFVSYC 720 (1201)
Q Consensus 711 gkV~sf~s~c 720 (1201)
|+|..+....
T Consensus 148 G~i~~i~~~~ 157 (337)
T 3ip3_A 148 GEIRLVNTQK 157 (337)
T ss_dssp SSEEEEEEEE
T ss_pred cceEEEEEEe
Confidence 7888776543
|
| >1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=2.1e-08 Score=112.90 Aligned_cols=119 Identities=15% Similarity=0.136 Sum_probs=93.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
++||+|+|+|.||+.+++.|.+.++.+ +.++|++.++ +++ + ++. +. +++++++.++|+||.|+|.
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~~--~-gv~-----~~----~d~~~ll~~~DvViiatp~ 68 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DTK--T-PVF-----DV----ADVDKHADDVDVLFLCMGS 68 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SSS--S-CEE-----EG----GGGGGTTTTCSEEEECSCT
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hhc--C-CCc-----ee----CCHHHHhcCCCEEEEcCCc
Confidence 579999999999999999999887888 5688988654 222 2 222 11 2344555789999999999
Q ss_pred cccHHHHHHHHHcCCeEEEccC---ChHHH-HHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASY---LSPEM-MALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Sy---vs~e~-~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
..|.+.+..|+++|+|+|+.+. ..++. ++|.+.|++.|...+...|++||+..+
T Consensus 69 ~~h~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~~v~v~~~~~~p~~~~l 126 (320)
T 1f06_A 69 ATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGWDPGMFSI 126 (320)
T ss_dssp TTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSBTTBHHHH
T ss_pred HHHHHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCCCEEEEecCChHHHHHH
Confidence 9999999999999999999864 24566 788999998886666666999998554
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.4e-08 Score=112.45 Aligned_cols=127 Identities=16% Similarity=0.177 Sum_probs=97.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
.++|+|||+|.+|++++..|.+.+ .+|+|++|+.+++++++ .+ ++... +..+ + .++|+||||+|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~ka~~la-~~-~~~~~--~~~~-----l----~~~DiVInaTp~G 183 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSSRGLDFFQ-RL-GCDCF--MEPP-----K----SAFDLIINATSAS 183 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTTHHHHH-HH-TCEEE--SSCC-----S----SCCSEEEECCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHH-HC-CCeEe--cHHH-----h----ccCCEEEEcccCC
Confidence 689999999999999999999987 89999999999999999 66 34332 2222 2 2899999999976
Q ss_pred cc------HHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 645 LH------HHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 645 ~h------~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
++ .......++.+.-++|+.|.+ . ..+.+.|+++|+.++++.+ |+..+...+ |+.
T Consensus 184 m~~~~~l~~~~l~~~l~~~~~v~D~vY~P-~-T~ll~~A~~~G~~~~~Gl~-------MLv~Qa~~~----------f~l 244 (269)
T 3phh_A 184 LHNELPLNKEVLKGYFKEGKLAYDLAYGF-L-TPFLSLAKELKTPFQDGKD-------MLIYQAALS----------FEK 244 (269)
T ss_dssp CCCSCSSCHHHHHHHHHHCSEEEESCCSS-C-CHHHHHHHHTTCCEECSHH-------HHHHHHHHH----------HHH
T ss_pred CCCCCCCChHHHHhhCCCCCEEEEeCCCC-c-hHHHHHHHHCcCEEECCHH-------HHHHHHHHH----------HHH
Confidence 54 233344788899999999986 4 4477899999999988666 566655443 457
Q ss_pred ecCCCC
Q psy12817 719 YCGGLP 724 (1201)
Q Consensus 719 ~cGGLP 724 (1201)
|+|--|
T Consensus 245 w~g~~~ 250 (269)
T 3phh_A 245 FSASQI 250 (269)
T ss_dssp HTTTSS
T ss_pred HhCCCC
Confidence 887543
|
| >2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.9e-09 Score=124.22 Aligned_cols=216 Identities=13% Similarity=0.081 Sum_probs=133.8
Q ss_pred ChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC---ccC-------CcEEEEecCCCc--c---CCCCCcE
Q psy12817 22 APSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED---ISE-------ASIIFGVKQVPV--D---LLLPNKT 84 (1201)
Q Consensus 22 tP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed---ls~-------adiIlgVKepp~--~---~L~~~kt 84 (1201)
+|+.+..++.+|++|.|++..+ .+|.|..|. ||+.|.+. ++. .+|+|.||.+.+ + .+.|.=.
T Consensus 54 ~p~~v~~~t~~~~~V~VvTdG~~iLGLGD~G~~-aG~pI~eGK~~Lf~~~agid~~pi~Ldv~~~dEfv~~v~~~~p~F~ 132 (398)
T 2a9f_A 54 DKTLAYDLTTKKNTVAVISDGTAVLGLGDIGPE-AAMPVMEGKAALFKAFAGVDAIPIVLDTKDTEEIISIVKALAPTFG 132 (398)
T ss_dssp CGGGHHHHSGGGTEEEEEECSSSCTTSCCCCHH-HHHHHHHHHHHHHHHHSSCEEEEEECCCCCHHHHHHHHHHHGGGCS
T ss_pred CHHHHHHhcccCCEEEEEECCccccCCCCcccc-cCCcchhCHHHHHHhccCCceeeeEeCCCCHHHHHHHHHHcCCcee
Confidence 7999999999999999999985 789999999 79988753 333 699999987433 1 1223324
Q ss_pred EEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccCCCCccccCCC
Q psy12817 85 YCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPA 164 (1201)
Q Consensus 85 ~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~tPfl~l~~~ 164 (1201)
++-|-.. ++ +.--++|+++.++ +.-.+ |. ..+.|...+.. |.-+
T Consensus 133 ~I~lED~-~~-p~~f~il~~~r~~--------------~~ipv-f~--DDiqGTa~V~l--Aall--------------- 176 (398)
T 2a9f_A 133 GINLEDI-SA-PRCFEIEQRLIKE--------------CHIPV-FH--DDQHGTAIVVL--AAIF--------------- 176 (398)
T ss_dssp EEEECSC-CT-THHHHHHHHHHHH--------------CSSCE-EE--HHHHHHHHHHH--HHHH---------------
T ss_pred EeccccC-CC-hHHHHHHHHhhhc--------------CCcce-ec--chhhhHHHHHH--HHHH---------------
Confidence 4444442 11 1113444444433 11112 43 45778777764 2222
Q ss_pred ccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecc-
Q psy12817 165 HNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE- 243 (1201)
Q Consensus 165 ~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~- 243 (1201)
.|++ ++| +.+.+.+|||.|+|.+|.++.+++..+|++ ++.++|.+
T Consensus 177 ----------~al~-------l~g--~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~---------------~I~v~D~~G 222 (398)
T 2a9f_A 177 ----------NSLK-------LLK--KSLDEVSIVVNGGGSAGLSITRKLLAAGAT---------------KVTVVDKFG 222 (398)
T ss_dssp ----------HHHH-------TTT--CCTTSCEEEEECCSHHHHHHHHHHHHHTCC---------------EEEEEETTE
T ss_pred ----------HHHH-------HhC--CCCCccEEEEECCCHHHHHHHHHHHHcCCC---------------eEEEEECCC
Confidence 2222 233 258899999999999999999999999953 34444443
Q ss_pred -hhHH--hhHHHhcCCcccccccccCccccc-chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCC
Q psy12817 244 -VRRR--NYLERIKGGGYDYQEYNENPSLYR-SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTS 319 (1201)
Q Consensus 244 -~~~~--~~~e~~~gg~f~~~ey~~~pe~y~-s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~ 319 (1201)
+... +.+.. ....|... -..+. ..-.++.++.+|++|.+ .+|.++|+||+++ |+++
T Consensus 223 li~~~R~~~L~~-~k~~fa~~-----~~~~~~~~~L~eav~~ADV~IG~-----Sapgl~T~EmVk~-Ma~~-------- 282 (398)
T 2a9f_A 223 IINEQEAAQLAP-HHLDIAKV-----TNREFKSGTLEDALEGADIFIGV-----SAPGVLKAEWISK-MAAR-------- 282 (398)
T ss_dssp ECCTTCCCSCCC----CHHHH-----HSCTTCCCSCSHHHHTTCSEEEC-----CSTTCCCHHHHHT-SCSS--------
T ss_pred cccCCccccchH-HHHHHhhc-----cCcccchhhHHHHhccCCEEEec-----CCCCCCCHHHHHh-hCCC--------
Confidence 1000 00000 00112110 00110 01124567789999998 3599999999999 9999
Q ss_pred CCCCCCCCceeEEEeeccC
Q psy12817 320 DGAPPLPHRLLGICDISAD 338 (1201)
Q Consensus 320 ~~~~~~p~rlsvIvDIS~D 338 (1201)
.+|.|+|--
T Consensus 283 ----------pIIfalsNP 291 (398)
T 2a9f_A 283 ----------PVIFAMANP 291 (398)
T ss_dssp ----------CEEEECCSS
T ss_pred ----------CEEEECCCC
Confidence 899999854
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=6.8e-09 Score=119.61 Aligned_cols=212 Identities=15% Similarity=0.086 Sum_probs=131.8
Q ss_pred ChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC---ccC-------CcEEEEecCCCc--c---CCCCCcE
Q psy12817 22 APSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED---ISE-------ASIIFGVKQVPV--D---LLLPNKT 84 (1201)
Q Consensus 22 tP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed---ls~-------adiIlgVKepp~--~---~L~~~kt 84 (1201)
+|+.+..++.+|++|.|++..+ .+|.|..|. ||+.|.+. +.. .+|+|.||.+.+ + .+.|.-.
T Consensus 58 ~p~~v~~~t~~~~~V~VvTdg~~vLGlGD~G~~-ag~pI~egK~~Lf~~~agid~~pi~ldv~~~dE~v~~vk~~~p~f~ 136 (388)
T 1vl6_A 58 DPEKTYVYTSRWNTVAVVSDGSAVLGLGNIGPY-GALPVMEGKAFLFKAFADIDAFPICLSESEEEKIISIVKSLEPSFG 136 (388)
T ss_dssp CGGGHHHHSGGGGEEEEEECSTTBTTTBSCCHH-HHHHHHHHHHHHHHHHHCCEEEEEECSCCCHHHHHHHHHHTGGGCS
T ss_pred CHHHHHhhcccCCeEEEEECCccccCCCccccc-cCCcchhCHHHHHHhccCCceEeEEeCCCCHHHHHHHHHHcCCcce
Confidence 7999999999999999999986 889999999 79998753 332 689999987433 1 1223323
Q ss_pred EEEEcCccccccCCHHHHHHHHhc-CCeEEEeccccccCCCceeeccchhhhHHHHHHHHHHHHHHHhccCCCCccccCC
Q psy12817 85 YCMFSHTIKAQETNMPLLDAILQK-NIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGP 163 (1201)
Q Consensus 85 ~i~FsHtiKaQ~~N~~lLd~ll~k-~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~alg~rlL~~g~~tPfl~l~~ 163 (1201)
++-|-+. +++ .--++++++.++ +|-+ |. ..+.|...+..+ .-+
T Consensus 137 ~i~lED~-~~p-~af~il~r~r~~~~Ipv----------------f~--DDiqGTasV~lA--al~-------------- 180 (388)
T 1vl6_A 137 GINLEDI-GAP-KCFRILQRLSEEMNIPV----------------FH--DDQQGTAVVVSA--AFL-------------- 180 (388)
T ss_dssp EEEECSC-CTT-HHHHHHHHHHHHCSSCE----------------EE--HHHHHHHHHHHH--HHH--------------
T ss_pred EeCHhhc-CCH-HHHHHHHHhhhhcCcce----------------ec--cccccHHHHHHH--HHH--------------
Confidence 4444441 221 113444444443 1222 33 346676666532 211
Q ss_pred CccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecc
Q psy12817 164 AHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACE 243 (1201)
Q Consensus 164 ~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~ 243 (1201)
.|++-. | +++.+.+|+|+|+|.+|.++.+.+..+|++ ++.++|..
T Consensus 181 -----------~A~~i~-------g--~~l~~~kVVv~GAGaAG~~iAkll~~~G~~---------------~I~v~Dr~ 225 (388)
T 1vl6_A 181 -----------NALKLT-------E--KKIEEVKVVVNGIGAAGYNIVKFLLDLGVK---------------NVVAVDRK 225 (388)
T ss_dssp -----------HHHHHH-------T--CCTTTCEEEEECCSHHHHHHHHHHHHHTCC---------------EEEEEETT
T ss_pred -----------HHHHHh-------C--CCCCCcEEEEECCCHHHHHHHHHHHhCCCC---------------eEEEEECC
Confidence 122222 2 257899999999999999999999999853 34555544
Q ss_pred ----hhHH----hhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCC
Q psy12817 244 ----VRRR----NYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPW 315 (1201)
Q Consensus 244 ----~~~~----~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~ 315 (1201)
..+. +..+. .|.... ++.. ...-.++.++.+||+|.+. +|.++|+||+++ |+++
T Consensus 226 Gli~~~R~~~~L~~~k~----~~A~~~---~~~~-~~~~L~eav~~ADVlIG~S-----ap~l~t~emVk~-Ma~~---- 287 (388)
T 1vl6_A 226 GILNENDPETCLNEYHL----EIARIT---NPER-LSGDLETALEGADFFIGVS-----RGNILKPEWIKK-MSRK---- 287 (388)
T ss_dssp EECCTTSGGGCSSHHHH----HHHHTS---CTTC-CCSCHHHHHTTCSEEEECS-----CSSCSCHHHHTT-SCSS----
T ss_pred CcccCCCcccccCHHHH----HHHHhh---hccC-chhhHHHHHccCCEEEEeC-----CCCccCHHHHHh-cCCC----
Confidence 2221 11111 111100 0000 0111245678899999993 489999999999 9998
Q ss_pred CCCCCCCCCCCCceeEEEeecc
Q psy12817 316 LPTSDGAPPLPHRLLGICDISA 337 (1201)
Q Consensus 316 ~~~~~~~~~~p~rlsvIvDIS~ 337 (1201)
.+|.|+|-
T Consensus 288 --------------pIIfalSN 295 (388)
T 1vl6_A 288 --------------PVIFALAN 295 (388)
T ss_dssp --------------CEEEECCS
T ss_pred --------------CEEEEcCC
Confidence 78888874
|
| >4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.70 E-value=3.7e-08 Score=111.14 Aligned_cols=117 Identities=16% Similarity=0.243 Sum_probs=93.3
Q ss_pred CCCeEEEEcCchhHH-HHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---CCcEEE
Q psy12817 564 ESRNVLLLGAGYVSR-PLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---SADLVV 638 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~-~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---~~DVVI 638 (1201)
++.||+|||+|.+|+ .++..|.+.++++ +.|+|++.++ + ++.. . . +++++++ +.|+|+
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~-------~-g~~~-~---~-----~~~~ll~~~~~vD~V~ 86 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV-------E-GVNS-Y---T-----TIEAMLDAEPSIDAVS 86 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC-------T-TSEE-E---S-----SHHHHHHHCTTCCEEE
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh-------c-CCCc-c---C-----CHHHHHhCCCCCCEEE
Confidence 357999999999998 7999999888888 4688998642 2 4442 1 2 2444443 599999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHH
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHL 697 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhm 697 (1201)
.|+|...|.+++++|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..+.|.+..+
T Consensus 87 i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~ 150 (330)
T 4ew6_A 87 LCMPPQYRYEAAYKALVAGKHVFLEKPPGATLSEVADLEALANKQGASLFASWHSRYAPAVEAA 150 (330)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSTTHHHH
T ss_pred EeCCcHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhccHHHHHH
Confidence 999999999999999999999999975 5678889999999999987764 4688886554
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=4e-08 Score=110.79 Aligned_cols=141 Identities=16% Similarity=0.178 Sum_probs=102.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC---HHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL---KEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~---~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.+.++++|+|+|.+|++++..|.+.+--+|+|++|+ .++++++++++. +......+..+ .+.+.+.+.++|+
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~--l~~~~~~l~~~Di 223 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLAD--QHAFTEALASADI 223 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHHHHCSE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHh--hhhhHhhccCceE
Confidence 456899999999999999999998754589999999 999999887652 23333444443 3344667788999
Q ss_pred EEEcCCCcccH----HH--HHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcC
Q psy12817 637 VVSLLPYNLHH----HV--AEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNG 710 (1201)
Q Consensus 637 VIs~lP~~~h~----~V--akacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~g 710 (1201)
||||+|..+++ ++ -..++..+.-++|+.|.+.+. .|.++|+++|+.++++.+ |+..+.+.+
T Consensus 224 IINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-~ll~~A~~~G~~~~~Gl~-------MLv~Qa~~a----- 290 (312)
T 3t4e_A 224 LTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMT-KLLQQAQQAGCKTIDGYG-------MLLWQGAEQ----- 290 (312)
T ss_dssp EEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSC-HHHHHHHHTTCEEECHHH-------HHHHHHHHH-----
T ss_pred EEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCC-HHHHHHHHCCCeEECcHH-------HHHHHHHHH-----
Confidence 99999987742 11 124556677789999976544 455889999999988666 566665544
Q ss_pred CcEEEEEeecCCC
Q psy12817 711 GKVESFVSYCGGL 723 (1201)
Q Consensus 711 gkV~sf~s~cGGL 723 (1201)
|+.|+|--
T Consensus 291 -----f~lwtg~~ 298 (312)
T 3t4e_A 291 -----FELWTGKA 298 (312)
T ss_dssp -----HHHHHSSC
T ss_pred -----HHHHhCCC
Confidence 45788753
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.67 E-value=1.5e-08 Score=111.41 Aligned_cols=136 Identities=19% Similarity=0.283 Sum_probs=97.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.++|+|+|+|.+|++++..|++.+ .+|++++|+.++++++++.+.... .+++.+ .+.+.+ .++|+|||++|.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R~~~~~~~la~~~~~~~--~~~~~~--~~~~~~--~~~DivVn~t~~ 190 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLD-CAVTITNRTVSRAEELAKLFAHTG--SIQALS--MDELEG--HEFDLIINATSS 190 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSHHHHHHHHHHTGGGS--SEEECC--SGGGTT--CCCSEEEECCSC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHhhccC--CeeEec--HHHhcc--CCCCEEEECCCC
Confidence 4689999999999999999999886 799999999999999987763210 123333 333332 589999999986
Q ss_pred cccHH---HHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE-EEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEee
Q psy12817 644 NLHHH---VAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT-VLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 644 ~~h~~---VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt-il~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~ 719 (1201)
..+.. +...+++.+..++|++|.+.... +.+.|+++|+. ++++++ |+..+.+. +|+.|
T Consensus 191 ~~~~~~~~i~~~~l~~~~~v~D~~y~p~~t~-~~~~a~~~G~~~~~~G~~-------mLv~Q~~~----------af~~w 252 (271)
T 1nyt_A 191 GISGDIPAIPSSLIHPGIYCYDMFYQKGKTP-FLAWCEQRGSKRNADGLG-------MLVAQAAH----------AFLLW 252 (271)
T ss_dssp GGGTCCCCCCGGGCCTTCEEEESCCCSSCCH-HHHHHHHTTCCEEECTHH-------HHHHHHHH----------HHHHH
T ss_pred CCCCCCCCCCHHHcCCCCEEEEeccCCcCCH-HHHHHHHcCCCeecCCHH-------HHHHHHHH----------HHHHH
Confidence 65421 33345677899999999754444 55889999998 777533 55555443 35678
Q ss_pred cCCCC
Q psy12817 720 CGGLP 724 (1201)
Q Consensus 720 cGGLP 724 (1201)
+|..|
T Consensus 253 ~g~~~ 257 (271)
T 1nyt_A 253 HGVLP 257 (271)
T ss_dssp HSSCC
T ss_pred hCCCC
Confidence 98764
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.67 E-value=2e-08 Score=110.01 Aligned_cols=122 Identities=15% Similarity=0.173 Sum_probs=93.4
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+. +|+|||+|.+|++++..|.+.+--+|+|++|+.++++++++.+. . .. .+++.+.++++|+||||+|.
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~---~--~~-----~~~~~~~~~~aDiVInatp~ 176 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK---I--FS-----LDQLDEVVKKAKSLFNTTSV 176 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE---E--EE-----GGGHHHHHHTCSEEEECSST
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc---c--CC-----HHHHHhhhcCCCEEEECCCC
Confidence 45 89999999999999999998754479999999999998887652 1 12 34567778899999999987
Q ss_pred cccH---HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE-EEeccccCchhHHHHHHHHHHHh
Q psy12817 644 NLHH---HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT-VLNEVGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 644 ~~h~---~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt-il~e~GlDPGIdhmlA~~~idei 706 (1201)
.+++ ++....++.+..++|+.|. ...+.++|+++|+. ++++.+ |+..+.+..+
T Consensus 177 gm~p~~~~i~~~~l~~~~~V~Divy~---~T~ll~~A~~~G~~~~~~Gl~-------MLv~Qa~~af 233 (253)
T 3u62_A 177 GMKGEELPVSDDSLKNLSLVYDVIYF---DTPLVVKARKLGVKHIIKGNL-------MFYYQAMENL 233 (253)
T ss_dssp TTTSCCCSCCHHHHTTCSEEEECSSS---CCHHHHHHHHHTCSEEECTHH-------HHHHHHHHHH
T ss_pred CCCCCCCCCCHHHhCcCCEEEEeeCC---CcHHHHHHHHCCCcEEECCHH-------HHHHHHHHHH
Confidence 6542 3345667889999999998 34566889999998 887655 5555544443
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.8e-08 Score=112.10 Aligned_cols=134 Identities=17% Similarity=0.263 Sum_probs=97.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC---eeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR---VEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~---v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
...++|+|+|+|.+|++++..|.+.+-.+|+|++|+.++++++++.+.. +.. .+.. + +.+++|+|||
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~--~~~~-----~---l~~~aDiIIn 193 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKA--QAFE-----Q---LKQSYDVIIN 193 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEE--EEGG-----G---CCSCEEEEEE
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeE--eeHH-----H---hcCCCCEEEE
Confidence 3568999999999999999999987545899999999999999987642 232 2222 2 2268999999
Q ss_pred cCCCcccHH---HHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE-EEeccccCchhHHHHHHHHHHHhhhcCCcEEE
Q psy12817 640 LLPYNLHHH---VAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT-VLNEVGLDPGIDHLLAMECIDAAHLNGGKVES 715 (1201)
Q Consensus 640 ~lP~~~h~~---VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt-il~e~GlDPGIdhmlA~~~idei~~~ggkV~s 715 (1201)
|+|..++.. +-...++.+..++|+.|.+.+.. +.+.|+++|+. ++++.+ |+..+.+.+
T Consensus 194 aTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~T~-ll~~A~~~G~~~~~~Gl~-------Mlv~Qa~~~---------- 255 (281)
T 3o8q_A 194 STSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTV-FNQWARQHGCAQAIDGLG-------MLVGQAAES---------- 255 (281)
T ss_dssp CSCCCC----CSCCGGGEEEEEEEEESCCCSSCCH-HHHHHHHTTCSEEECTHH-------HHHHHHHHH----------
T ss_pred cCcCCCCCCCCCCCHHHhCcCCEEEEecCCCccCH-HHHHHHHCCCCEEECcHH-------HHHHHHHHH----------
Confidence 999877533 22345667788999999865555 44789999997 888666 566655443
Q ss_pred EEeecCCCC
Q psy12817 716 FVSYCGGLP 724 (1201)
Q Consensus 716 f~s~cGGLP 724 (1201)
|+.|+|--|
T Consensus 256 f~lwtg~~~ 264 (281)
T 3o8q_A 256 FMLWRGLRP 264 (281)
T ss_dssp HHHHHSCCC
T ss_pred HHHHhCCCC
Confidence 467888654
|
| >1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=4.9e-08 Score=108.46 Aligned_cols=118 Identities=17% Similarity=0.124 Sum_probs=90.2
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHh---CCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHR---DENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADL 636 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~---~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DV 636 (1201)
.+++||+|||+|.+|+.+++.+.+ .+++++ .|+||+. +++.+ ++. .. +++++++ +.|+
T Consensus 5 ~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-----~a~~~-g~~-----~~-----~~~ell~~~~vD~ 68 (294)
T 1lc0_A 5 SGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-----LGSLD-EVR-----QI-----SLEDALRSQEIDV 68 (294)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-----CCEET-TEE-----BC-----CHHHHHHCSSEEE
T ss_pred CCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-----HHHHc-CCC-----CC-----CHHHHhcCCCCCE
Confidence 357899999999999999998876 456774 4788763 12222 332 12 3555665 6899
Q ss_pred EEEcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHH
Q psy12817 637 VVSLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDH 696 (1201)
Q Consensus 637 VIs~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdh 696 (1201)
|+.|+|...|.+++++|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+..
T Consensus 69 V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~~~r~~p~~~~ 133 (294)
T 1lc0_A 69 AYICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEHVELLMEEFEF 133 (294)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHH
T ss_pred EEEeCCcHhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhccHHHHH
Confidence 99999999999999999999999999875 4678899999999999987654 457776543
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=6.8e-09 Score=115.23 Aligned_cols=134 Identities=13% Similarity=0.180 Sum_probs=97.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.+.++|+|+|+|.+|++++..|.+.+--+|+|++|+.+++++++..+ ... . .+++.+.++++|+|||++|
T Consensus 115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~---~~~-----~--~~~~~~~~~~aDiVInaTp 184 (277)
T 3don_A 115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNI---NKI-----N--LSHAESHLDEFDIIINTTP 184 (277)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCC---EEE-----C--HHHHHHTGGGCSEEEECCC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhc---ccc-----c--HhhHHHHhcCCCEEEECcc
Confidence 35689999999999999999999875448999999999988877532 221 1 4567788889999999999
Q ss_pred CcccHHH----HHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 643 YNLHHHV----AEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 643 ~~~h~~V----akacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
..+++.+ -...++.+..++|++|.+... .+.+.|+++|+.++++.+ |+..+...+ |+.
T Consensus 185 ~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T-~ll~~A~~~G~~~~~Gl~-------MLv~Qa~~~----------f~l 246 (277)
T 3don_A 185 AGMNGNTDSVISLNRLASHTLVSDIVYNPYKT-PILIEAEQRGNPIYNGLD-------MFVHQGAES----------FKI 246 (277)
T ss_dssp -------CCSSCCTTCCSSCEEEESCCSSSSC-HHHHHHHHTTCCEECTHH-------HHHHHHHHH----------HHH
T ss_pred CCCCCCCcCCCCHHHcCCCCEEEEecCCCCCC-HHHHHHHHCcCEEeCCHH-------HHHHHHHHH----------HHH
Confidence 8765432 234466788899999985544 577889999999988666 566655444 457
Q ss_pred ecCCCC
Q psy12817 719 YCGGLP 724 (1201)
Q Consensus 719 ~cGGLP 724 (1201)
|+|--|
T Consensus 247 wtg~~~ 252 (277)
T 3don_A 247 WTNLEP 252 (277)
T ss_dssp HHSSCC
T ss_pred HcCCCC
Confidence 887543
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=3e-08 Score=108.22 Aligned_cols=130 Identities=21% Similarity=0.216 Sum_probs=96.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.+. +|+|||+|.+|++++..|.+.+ .+|++++|+.++++++++.++ .. ..+ +.++ +++|+||+|+|
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g-~~v~v~~r~~~~~~~l~~~~~-~~-----~~~-----~~~~-~~~Divi~~tp 180 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAG-LEVWVWNRTPQRALALAEEFG-LR-----AVP-----LEKA-REARLLVNATR 180 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTT-CCEEEECSSHHHHHHHHHHHT-CE-----ECC-----GGGG-GGCSEEEECSS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhc-cc-----hhh-----Hhhc-cCCCEEEEccC
Confidence 345 8999999999999999999875 489999999999999988773 32 122 3445 78999999999
Q ss_pred CcccH----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 643 YNLHH----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 643 ~~~h~----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
..+|+ .+...+++.|++++|.+|.+.+. .+.+.++++|+.++++ ..|+..+.+. +|..
T Consensus 181 ~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~t-~l~~~a~~~g~~~v~g-------~~mlv~q~~~----------a~~~ 242 (263)
T 2d5c_A 181 VGLEDPSASPLPAELFPEEGAAVDLVYRPLWT-RFLREAKAKGLKVQTG-------LPMLAWQGAL----------AFRL 242 (263)
T ss_dssp TTTTCTTCCSSCGGGSCSSSEEEESCCSSSSC-HHHHHHHHTTCEEECS-------HHHHHHHHHH----------HHHH
T ss_pred CCCCCCCCCCCCHHHcCCCCEEEEeecCCccc-HHHHHHHHCcCEEECc-------HHHHHHHHHH----------HHHH
Confidence 88763 22245678899999999864443 4778899999998864 2344444333 3456
Q ss_pred ecCCCC
Q psy12817 719 YCGGLP 724 (1201)
Q Consensus 719 ~cGGLP 724 (1201)
|+|..|
T Consensus 243 w~g~~~ 248 (263)
T 2d5c_A 243 WTGLLP 248 (263)
T ss_dssp HHSCCC
T ss_pred HhCCCC
Confidence 888644
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=98.62 E-value=3.1e-08 Score=109.17 Aligned_cols=131 Identities=23% Similarity=0.323 Sum_probs=96.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||+|.+|++++..|.+.+ .+|++++|+.++++++++.+ ++. +.+ ++.+.++++|+||+|+|
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g-~~V~v~~r~~~~~~~l~~~~-g~~-----~~~----~~~~~~~~aDiVi~atp 195 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEG-AKVFLWNRTKEKAIKLAQKF-PLE-----VVN----SPEEVIDKVQVIVNTTS 195 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHT-CEEEEECSSHHHHHHHTTTS-CEE-----ECS----CGGGTGGGCSEEEECSS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHc-CCe-----eeh----hHHhhhcCCCEEEEeCC
Confidence 34589999999999999999998875 49999999999999988766 332 221 34566789999999999
Q ss_pred CcccHH----HHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEe
Q psy12817 643 YNLHHH----VAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 643 ~~~h~~----VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s 718 (1201)
...++. +...+++.|+.++|.+| ....+.+.|+++|+.++++. .|+..+.+. +|..
T Consensus 196 ~~~~~~~~~~i~~~~l~~g~~viDv~~---~~t~ll~~a~~~g~~~v~g~-------~mlv~q~~~----------a~~~ 255 (275)
T 2hk9_A 196 VGLKDEDPEIFNYDLIKKDHVVVDIIY---KETKLLKKAKEKGAKLLDGL-------PMLLWQGIE----------AFKI 255 (275)
T ss_dssp TTSSTTCCCSSCGGGCCTTSEEEESSS---SCCHHHHHHHHTTCEEECSH-------HHHHHHHHH----------HHHH
T ss_pred CCCCCCCCCCCCHHHcCCCCEEEEcCC---ChHHHHHHHHHCcCEEECCH-------HHHHHHHHH----------HHHH
Confidence 876532 22345778999999999 23446678889999988652 344444333 3457
Q ss_pred ecCCCC
Q psy12817 719 YCGGLP 724 (1201)
Q Consensus 719 ~cGGLP 724 (1201)
|+|..|
T Consensus 256 w~g~~~ 261 (275)
T 2hk9_A 256 WNGCEV 261 (275)
T ss_dssp HHCCCC
T ss_pred HHCCCC
Confidence 887643
|
| >3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.56 E-value=7.4e-08 Score=109.31 Aligned_cols=141 Identities=17% Similarity=0.171 Sum_probs=96.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC--------CCCe-EEEEeCCHHHHH------HHHHHcCCeeEEEeecCCCCchHHHh
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD--------ENIH-ITLGSLLKEDID------KVTNEFGRVEATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~--------~~~~-VtVadR~~ekAe------~La~~~~~v~~v~lDV~D~~~e~L~e 629 (1201)
|.||+|+|+|.||+.+++.|.+. .+++ +.|+|++.++++ .+...++.... .+.. ++.+
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~--~~~~-----d~~~ 74 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGML--RDDA-----KAIE 74 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSC--SBCC-----CHHH
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccc--cCCC-----CHHH
Confidence 78999999999999999999877 6777 557888754321 12222111110 0011 3444
Q ss_pred hcc--CCcEEEEcCCCccc----HHHHHHHHHcCCeEEEc--cCChHHHHHHHHHHHHcCCEEEecc---ccCchhHHHH
Q psy12817 630 LVR--SADLVVSLLPYNLH----HHVAEFCIQHGKNLVTA--SYLSPEMMALHERAASAGITVLNEV---GLDPGIDHLL 698 (1201)
Q Consensus 630 lI~--~~DVVIs~lP~~~h----~~VakacIeaGkh~VD~--Syvs~e~~eLde~AkeAGVtil~e~---GlDPGIdhml 698 (1201)
+++ +.|+||.|+|...| .+.+..|+++|+|+|++ .......++|.+.|+++|+.++.+. +.-|-+..+
T Consensus 75 ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~v~~g~Pii~~l- 153 (327)
T 3do5_A 75 VVRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGAMPVVKLA- 153 (327)
T ss_dssp HHHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSSTTSCCHHHH-
T ss_pred HhcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEEeeecCHHHHHH-
Confidence 443 69999999999888 89999999999999999 5666678899999999999887654 455655433
Q ss_pred HHHHHHHhhhcCCcEEEEEee
Q psy12817 699 AMECIDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 699 A~~~idei~~~ggkV~sf~s~ 719 (1201)
.++- .+++|.++...
T Consensus 154 -----~~~l-~~~~I~~I~GI 168 (327)
T 3do5_A 154 -----KRYL-ALCEIESVKGI 168 (327)
T ss_dssp -----HTTT-TTSCEEEEEEE
T ss_pred -----HHHh-hCCCccEEEEE
Confidence 2322 45777776643
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.51 E-value=2.1e-08 Score=111.14 Aligned_cols=137 Identities=17% Similarity=0.272 Sum_probs=98.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe----eEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV----EATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v----~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.+.++++|+|+|.+|++++..|++.+ +|++++|+.++++++++.+... ..+.+|+.+ +.+.+.++|+||
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~DilV 198 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG-----LDVDLDGVDIII 198 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC-----TTCCCTTCCEEE
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee-----HHHhhCCCCEEE
Confidence 34689999999999999999999876 9999999999998887665210 011234443 244567899999
Q ss_pred EcCCCcccH-----HH-HHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCc
Q psy12817 639 SLLPYNLHH-----HV-AEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGK 712 (1201)
Q Consensus 639 s~lP~~~h~-----~V-akacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggk 712 (1201)
|++|...++ ++ ...+++.+..++|++|.+.. ..+.+.|+++|+.++++++ |+..+.+.
T Consensus 199 n~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p~~-t~ll~~a~~~G~~~~~Gl~-------mL~~Qa~~-------- 262 (287)
T 1nvt_A 199 NATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLE-TVLLKEAKKVNAKTINGLG-------MLIYQGAV-------- 262 (287)
T ss_dssp ECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSS-CHHHHHHHTTTCEEECTHH-------HHHHHHHH--------
T ss_pred ECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCCcc-CHHHHHHHHCCCEEeCcHH-------HHHHHHHH--------
Confidence 999876542 12 34567788899999995433 3466789999999876443 55554433
Q ss_pred EEEEEeecCCCC
Q psy12817 713 VESFVSYCGGLP 724 (1201)
Q Consensus 713 V~sf~s~cGGLP 724 (1201)
+|+.|+|..|
T Consensus 263 --af~~w~g~~~ 272 (287)
T 1nvt_A 263 --AFKIWTGVEP 272 (287)
T ss_dssp --HHHHHHSSCC
T ss_pred --HHHHHhCCCC
Confidence 3568998754
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=7.4e-07 Score=99.83 Aligned_cols=111 Identities=21% Similarity=0.375 Sum_probs=86.5
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.|+||.+||.|.||.++++.|.+. +++|++.||++++++.+.+. ++.. .++..++++++|+||.|+|.
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~-G~~v~v~dr~~~~~~~l~~~--Ga~~---------a~s~~e~~~~~dvv~~~l~~ 69 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQSAVDGLVAA--GASA---------ARSARDAVQGADVVISMLPA 69 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHT--TCEE---------CSSHHHHHTTCSEEEECCSC
T ss_pred CcCEEEEeeehHHHHHHHHHHHhC-CCeEEEEcCCHHHHHHHHHc--CCEE---------cCCHHHHHhcCCceeecCCc
Confidence 589999999999999999999986 68999999999999998864 4432 23577888899999999996
Q ss_pred cccH-HHHH------HHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 644 NLHH-HVAE------FCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 644 ~~h~-~Vak------acIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.-+. .|.. ..++.|+-+||.|.+++ ..+++.+.++++|+.++.
T Consensus 70 ~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lD 120 (300)
T 3obb_A 70 SQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD 120 (300)
T ss_dssp HHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred hHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 4332 2221 12345788999987655 568899999999999874
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=7e-07 Score=93.49 Aligned_cols=77 Identities=23% Similarity=0.211 Sum_probs=66.5
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|++|+|.| +|++|+.+++.|++..+++|++.+|+.+ ++++++...+++..+..|+.| .+.+.++++++|+||++++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQN--PGXLEQAVTNAEVVFVGAM 82 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTC--HHHHHHHHTTCSEEEESCC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCC--HHHHHHHHcCCCEEEEcCC
Confidence 45599999 6999999999999334689999999999 887775444678999999998 8999999999999999986
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 83 ~ 83 (221)
T 3r6d_A 83 E 83 (221)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.1e-06 Score=103.60 Aligned_cols=136 Identities=22% Similarity=0.250 Sum_probs=98.6
Q ss_pred CeEEEEcCchhHHHHHHHHHhC---------CCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--C
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRD---------ENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--S 633 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~---------~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~ 633 (1201)
.||+|+|+|.||+.+++.|.++ .+++ +.|++|+.++++.+.. +... . . +++++++ +
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~---~~~~-~---~-----d~~ell~d~d 78 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG---GLPL-T---T-----NPFDVVDDPE 78 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT---TCCE-E---S-----CTHHHHTCTT
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc---cCcc-c---C-----CHHHHhcCCC
Confidence 5899999999999999877642 4666 5689999998877632 2221 1 1 2444554 5
Q ss_pred CcEEEEcCCC-cccHHHHHHHHHcCCeEEEccC--ChHHHHHHHHHHHHcCCEEEecc---ccCchhHHHHHHHHHHHhh
Q psy12817 634 ADLVVSLLPY-NLHHHVAEFCIQHGKNLVTASY--LSPEMMALHERAASAGITVLNEV---GLDPGIDHLLAMECIDAAH 707 (1201)
Q Consensus 634 ~DVVIs~lP~-~~h~~VakacIeaGkh~VD~Sy--vs~e~~eLde~AkeAGVtil~e~---GlDPGIdhmlA~~~idei~ 707 (1201)
.|+|+.|+|. ..|.++++.|+++|+|+|++.- ...+.++|.+.|+++|+.++.+. |..|-+..+ .++-
T Consensus 79 iDvVve~tp~~~~h~~~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V~~giPii~~L------relL 152 (444)
T 3mtj_A 79 IDIVVELIGGLEPARELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGGIPIIKAL------REGL 152 (444)
T ss_dssp CCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCHHHHH------HTTT
T ss_pred CCEEEEcCCCchHHHHHHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEeeeCChHHHHHH------HHHH
Confidence 8999999996 8999999999999999999964 44567889999999999997543 556654332 2322
Q ss_pred hcCCcEEEEEeec
Q psy12817 708 LNGGKVESFVSYC 720 (1201)
Q Consensus 708 ~~ggkV~sf~s~c 720 (1201)
.+++|.++....
T Consensus 153 -~~~~Ig~I~GIl 164 (444)
T 3mtj_A 153 -TANRIEWLAGII 164 (444)
T ss_dssp -TTSCEEEEEEEC
T ss_pred -hCCCCceEEEEE
Confidence 456777766443
|
| >3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=98.41 E-value=5.6e-07 Score=102.05 Aligned_cols=145 Identities=19% Similarity=0.282 Sum_probs=94.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC------CCCe-EEEEeCCHH---------HHHHHHHHcCCeeEEEeecCCCCchHHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD------ENIH-ITLGSLLKE---------DIDKVTNEFGRVEATLIDVNNGGSDNLS 628 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~------~~~~-VtVadR~~e---------kAe~La~~~~~v~~v~lDV~D~~~e~L~ 628 (1201)
+.||+|+|+|.||+.+++.|.+. .+++ +.|+|++.+ ++.........+.....|. .+.+.
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~----~e~l~ 79 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSG----PEDLM 79 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCS----GGGGT
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCH----HHHhc
Confidence 57999999999999999999874 4566 457777643 2222222221111001121 12222
Q ss_pred hhccCCcEEEEcCCCccc----HHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHH
Q psy12817 629 GLVRSADLVVSLLPYNLH----HHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMEC 702 (1201)
Q Consensus 629 elI~~~DVVIs~lP~~~h----~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~ 702 (1201)
+ .+.|+||.|+|...| .+.+..|+++|+|+|++. ..+...++|.+.|+++|+.++.|..+.-|+--+ +.
T Consensus 80 ~--~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~giPii---~~ 154 (325)
T 3ing_A 80 G--EAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGGVPLF---SV 154 (325)
T ss_dssp T--SCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCH---HH
T ss_pred C--CCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeecccCHHH---HH
Confidence 2 268999999997655 488999999999999984 355678899999999999988776544333222 22
Q ss_pred HHHhhhcCCcEEEEEee
Q psy12817 703 IDAAHLNGGKVESFVSY 719 (1201)
Q Consensus 703 idei~~~ggkV~sf~s~ 719 (1201)
+.+.- .+++|.++...
T Consensus 155 l~~~l-~g~~I~~i~Gi 170 (325)
T 3ing_A 155 LDYSI-LPSKVKRFRGI 170 (325)
T ss_dssp HHHTC-TTCCEEEEEEE
T ss_pred HHHHh-hCCCeeEEEEE
Confidence 23332 46777776643
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.8e-07 Score=92.70 Aligned_cols=91 Identities=14% Similarity=0.319 Sum_probs=71.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
.++|+|+|+|.+|+.++..|.+. +.+|++++|+.++++++++.++ +... . .+.+.+.++++|+||+|+|..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~~~~~~~~a~~~~-~~~~--~-----~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP-QYKVTVAGRNIDHVRAFAEKYE-YEYV--L-----INDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT-TCEEEEEESCHHHHHHHHHHHT-CEEE--E-----CSCHHHHHHTCSEEEECSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEcCCHHHHHHHHHHhC-CceE--e-----ecCHHHHhcCCCEEEEeCCCC
Confidence 68999999999999999999875 5679999999999999998873 3321 1 234677788999999999865
Q ss_pred ccHHHHHHHHHcCCeEEEccC
Q psy12817 645 LHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 645 ~h~~VakacIeaGkh~VD~Sy 665 (1201)
++.+...+++.|.+++|.+.
T Consensus 92 -~~~~~~~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 92 -TPIVEERSLMPGKLFIDLGN 111 (144)
T ss_dssp -SCSBCGGGCCTTCEEEECCS
T ss_pred -CcEeeHHHcCCCCEEEEccC
Confidence 32333466788999999864
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.31 E-value=2.6e-06 Score=95.62 Aligned_cols=112 Identities=18% Similarity=0.272 Sum_probs=86.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
..++||+|||+|.||..++..|++. +++|++.||++++++++.+. ++.. ..++.++++++|+||.|+|
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~l~~~--g~~~---------~~~~~e~~~~aDvVi~~vp 96 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEA-GYALQVWNRTPARAASLAAL--GATI---------HEQARAAARDADIVVSMLE 96 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTT--TCEE---------ESSHHHHHTTCSEEEECCS
T ss_pred cCCCEEEEECccHHHHHHHHHHHhC-CCeEEEEcCCHHHHHHHHHC--CCEe---------eCCHHHHHhcCCEEEEECC
Confidence 3568999999999999999999986 57999999999999988764 3432 1246777889999999999
Q ss_pred Cccc-HHHH-----HHHHHcCCeEEEccCChHH-HHHHHHHHHHcCCEEEe
Q psy12817 643 YNLH-HHVA-----EFCIQHGKNLVTASYLSPE-MMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~~h-~~Va-----kacIeaGkh~VD~Syvs~e-~~eLde~AkeAGVtil~ 686 (1201)
...+ ..+. ...+..|+.++|.|-..+. .+++.+.+++.|+.++.
T Consensus 97 ~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 97 NGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLD 147 (320)
T ss_dssp SHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 6433 2222 1235678899999876554 56777888888998875
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=3.1e-07 Score=101.64 Aligned_cols=149 Identities=17% Similarity=0.212 Sum_probs=95.1
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCCCeEE-EEeCCHHHH--HHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDENIHIT-LGSLLKEDI--DKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~~~Vt-VadR~~ekA--e~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+++||+|+|+ |+||+.+++.+.+.++++++ +++++.++. +.+.... ++.. .++.. .++++++++++|+||+
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~-g~~~--~~v~~--~~dl~~~l~~~DvVID 78 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELA-GAGK--TGVTV--QSSLDAVKDDFDVFID 78 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSS-SSSC--CSCCE--ESCSTTTTTSCSEEEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHc-CCCc--CCcee--cCCHHHHhcCCCEEEE
Confidence 3579999997 99999999999888888865 778775431 1111111 1110 01110 1235566678999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHH--HHHHHHhhhcCCcEEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLA--MECIDAAHLNGGKVES 715 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA--~~~idei~~~ggkV~s 715 (1201)
++++..+.+.++.|+++|+|+|..+ +..++..+|.+.|++.++ +....+..|+.-++. .+....+. .+-.|+-
T Consensus 79 ft~p~~~~~~~~~a~~~G~~vVigTtG~~~e~~~~L~~~a~~~~v--v~a~N~siGvn~~~~l~~~aa~~~~-~~~diei 155 (273)
T 1dih_A 79 FTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAI--VFAANFSVGVNVMLKLLEKAAKVMG-DYTDIEI 155 (273)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHTTTSCE--EECSCCCHHHHHHHHHHHHHHHHHT-TTSEEEE
T ss_pred cCChHHHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHhcCCCCE--EEEecCcHHHHHHHHHHHHHHHhcC-CCCCEEE
Confidence 9987888999999999999999864 455566777777766654 445566667654332 22223331 1235665
Q ss_pred EEeec
Q psy12817 716 FVSYC 720 (1201)
Q Consensus 716 f~s~c 720 (1201)
++...
T Consensus 156 iE~Hh 160 (273)
T 1dih_A 156 IEAHH 160 (273)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 56544
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.27 E-value=1.5e-05 Score=76.81 Aligned_cols=111 Identities=14% Similarity=0.124 Sum_probs=77.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~ 643 (1201)
.++|+|+|+|.+|+.+++.|.+. +.+|+++++++++++.+...+ ++..+..|..+ .+.+.+. ++++|+||.|+|.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~~-~~~~~~~d~~~--~~~l~~~~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEI-DALVINGDCTK--IKTLEDAGIEDADMYIAVTGK 79 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC-SSEEEESCTTS--HHHHHHTTTTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHhc-CcEEEEcCCCC--HHHHHHcCcccCCEEEEeeCC
Confidence 47999999999999999999886 578999999999988887655 56666778776 6666644 7789999999986
Q ss_pred cc-cHHHHHHHHHcCC-eEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 644 NL-HHHVAEFCIQHGK-NLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 644 ~~-h~~VakacIeaGk-h~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
.. +..+...+-+.+. +++......... +..++.|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~~~~~~~----~~l~~~g~~ 117 (140)
T 1lss_A 80 EEVNLMSSLLAKSYGINKTIARISEIEYK----DVFERLGVD 117 (140)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECSSTTHH----HHHHHTTCS
T ss_pred chHHHHHHHHHHHcCCCEEEEEecCHhHH----HHHHHcCCC
Confidence 43 2334455545553 344433322222 234567874
|
| >2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.6e-07 Score=103.67 Aligned_cols=114 Identities=14% Similarity=0.215 Sum_probs=88.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCC-eeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGR-VEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~-v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
...++|+|||+|.+|+.+++.|.+..++ +|++.||+.++++++++.+.. +.. . ++++++++++|+|+.|
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~-----~----~~~~e~v~~aDiVi~a 203 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRV-----C----SSVQEAVAGADVIITV 203 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEE-----C----SSHHHHHTTCSEEEEC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEE-----e----CCHHHHHhcCCEEEEE
Confidence 3467999999999999999999875334 799999999999999987642 321 1 2467778899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEe
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~ 686 (1201)
+|.. .+-+-..+++.|+|++|.+...+.++++++.++++|+.++.
T Consensus 204 tp~~-~~v~~~~~l~~g~~vi~~g~~~p~~~el~~~~~~~g~~~vD 248 (312)
T 2i99_A 204 TLAT-EPILFGEWVKPGAHINAVGASRPDWRELDDELMKEAVLYVD 248 (312)
T ss_dssp CCCS-SCCBCGGGSCTTCEEEECCCCSTTCCSBCHHHHHHSEEEES
T ss_pred eCCC-CcccCHHHcCCCcEEEeCCCCCCCceeccHHHHhcCEEEEC
Confidence 9953 21121257789999999865555678888889999987775
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.26 E-value=7.3e-06 Score=80.27 Aligned_cols=111 Identities=12% Similarity=0.110 Sum_probs=80.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP 642 (1201)
+|++|+|+|+|++|+.+++.|.+. +++|++.|+++++++.+... ++..+..|+++ ++.+.++ ++++|+||.++|
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~~~~~~~~~~--~~~~~~gd~~~--~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSKEKIELLEDE--GFDAVIADPTD--ESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHT--TCEEEECCTTC--HHHHHHSCCTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHC--CCcEEECCCCC--HHHHHhCCcccCCEEEEecC
Confidence 478999999999999999999986 57899999999999887653 57788899998 7777765 578999999998
Q ss_pred Cc-ccHHHHHHHHHcCC-eEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 643 YN-LHHHVAEFCIQHGK-NLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 643 ~~-~h~~VakacIeaGk-h~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
.. .+..++..+-+.+. .++.......... ..++.|+.
T Consensus 80 ~~~~n~~~~~~a~~~~~~~iia~~~~~~~~~----~l~~~G~~ 118 (141)
T 3llv_A 80 DDEFNLKILKALRSVSDVYAIVRVSSPKKKE----EFEEAGAN 118 (141)
T ss_dssp CHHHHHHHHHHHHHHCCCCEEEEESCGGGHH----HHHHTTCS
T ss_pred CHHHHHHHHHHHHHhCCceEEEEEcChhHHH----HHHHcCCC
Confidence 43 23445555555553 3333333322222 24567775
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=98.26 E-value=1.8e-06 Score=96.37 Aligned_cols=110 Identities=17% Similarity=0.200 Sum_probs=79.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
.+||.+||.|.||.+++..|++. +++|++.||++++++++.+. ++.. .+...++++++|+||.|+|..
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~-G~~V~v~dr~~~~~~~l~~~--G~~~---------~~s~~e~~~~~dvvi~~l~~~ 72 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEA-GYELVVWNRTASKAEPLTKL--GATV---------VENAIDAITPGGIVFSVLADD 72 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT-TCEEEEC-------CTTTTT--TCEE---------CSSGGGGCCTTCEEEECCSSH
T ss_pred CCcEEEEecHHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHc--CCeE---------eCCHHHHHhcCCceeeeccch
Confidence 36899999999999999999986 68999999999999887653 3332 224677888999999999865
Q ss_pred ccHH-H----HHHHHHcCCeEEEccCChHH-HHHHHHHHHHcCCEEEe
Q psy12817 645 LHHH-V----AEFCIQHGKNLVTASYLSPE-MMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h~~-V----akacIeaGkh~VD~Syvs~e-~~eLde~AkeAGVtil~ 686 (1201)
-+.. + +...+..|.-+||.|.++++ .+++.+.++++|+.++.
T Consensus 73 ~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ld 120 (297)
T 4gbj_A 73 AAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVG 120 (297)
T ss_dssp HHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceec
Confidence 3321 1 23446677889999876654 67899999999999874
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.26 E-value=3.1e-06 Score=91.88 Aligned_cols=95 Identities=17% Similarity=0.212 Sum_probs=76.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||+|.| +|++|+.+++.|.+.++.+|++.+|+.++++.+.. ++++.+..|+.| .+.+.++++++|+||++.+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~--~~v~~~~~D~~d--~~~l~~~~~~~d~vi~~a~~~ 76 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR--GKVSVRQLDYFN--QESMVEAFKGMDTVVFIPSII 76 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGB--TTBEEEECCTTC--HHHHHHHTTTCSEEEECCCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhh--CCCEEEEcCCCC--HHHHHHHHhCCCEEEEeCCCC
Confidence 5799999 69999999999988767899999999987665432 478999999998 899999999999999998643
Q ss_pred c--------cHHHHHHHHHcCC-eEEEcc
Q psy12817 645 L--------HHHVAEFCIQHGK-NLVTAS 664 (1201)
Q Consensus 645 ~--------h~~VakacIeaGk-h~VD~S 664 (1201)
. ...++++|.++|+ ++|-+|
T Consensus 77 ~~~~~~~~~~~~l~~aa~~~gv~~iv~~S 105 (289)
T 3e48_A 77 HPSFKRIPEVENLVYAAKQSGVAHIIFIG 105 (289)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccchhhHHHHHHHHHHHHHcCCCEEEEEc
Confidence 2 2456777777774 555553
|
| >1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=2.9e-07 Score=105.33 Aligned_cols=116 Identities=13% Similarity=0.119 Sum_probs=89.4
Q ss_pred CCCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
..++|+|||+|.+|+.+++.|.. .+..+|+|.+|+.++++++++.+. ++... +. ++++++++++|+||+
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~---~~----~~~~eav~~aDiVi~ 200 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIR---RA----SSVAEAVKGVDIITT 200 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEE---EC----SSHHHHHTTCSEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEE---Ee----CCHHHHHhcCCEEEE
Confidence 46899999999999999998764 444579999999999999998764 33221 12 246777889999999
Q ss_pred cCCCcccHHH-HHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEe
Q psy12817 640 LLPYNLHHHV-AEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 640 ~lP~~~h~~V-akacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~ 686 (1201)
|+|...+.++ ...+++.|+|+++++...+.+++++..+.+.+..++.
T Consensus 201 aTps~~~~pvl~~~~l~~G~~V~~vgs~~p~~~El~~~~~~~a~v~vD 248 (350)
T 1x7d_A 201 VTADKAYATIITPDMLEPGMHLNAVGGDCPGKTELHADVLRNARVFVE 248 (350)
T ss_dssp CCCCSSEEEEECGGGCCTTCEEEECSCCBTTBEEECHHHHHTSEEEES
T ss_pred eccCCCCCceecHHHcCCCCEEEECCCCCCCceeeCHHHHhcCcEEEC
Confidence 9997643233 3467899999999987667788888888877766654
|
| >1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=4.5e-06 Score=96.61 Aligned_cols=121 Identities=19% Similarity=0.261 Sum_probs=88.4
Q ss_pred CCeEEEEcC-chhHHHHHHHHHhCCC-CeEE-E-EeCCHHHHHHHHHHcCCeeEEE-eecCC----------C------C
Q psy12817 565 SRNVLLLGA-GYVSRPLIEYLHRDEN-IHIT-L-GSLLKEDIDKVTNEFGRVEATL-IDVNN----------G------G 623 (1201)
Q Consensus 565 mkKVLILGA-G~VG~~va~~La~~~~-~~Vt-V-adR~~ekAe~La~~~~~v~~v~-lDV~D----------~------~ 623 (1201)
|+||.|||+ |.||+.+++.+.++++ ++++ + ++++.+++.+.+.++ +.+.+. .|-.. + .
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f-~~~~v~v~d~~~~~~l~~~l~~~~~~v~~g 82 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRT-NAKRAVIADPSLYNDLKEALAGSSVEAAAG 82 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHT-TCSEEEESCGGGHHHHHHHTTTCSSEEEES
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHc-CCcEEEEcChHHHHHHHHHhccCCcEEEeC
Confidence 689999998 9999999999998876 7754 4 799999998888887 344332 22111 0 0
Q ss_pred chHHHhhcc-CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC--ChHHHHHHHHHHHHcCCEEEe
Q psy12817 624 SDNLSGLVR-SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY--LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 624 ~e~L~elI~-~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy--vs~e~~eLde~AkeAGVtil~ 686 (1201)
.+.+.+++. .+|+||++++...+...+.+|+++|||++++.= ....-..+.+.|+++|+.+++
T Consensus 83 ~~~~~el~~~~iDvVV~ai~G~aGl~ptlaAi~aGK~VvlANKE~lv~~G~~l~~~A~~~gv~liP 148 (388)
T 1r0k_A 83 ADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLP 148 (388)
T ss_dssp HHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEECCSHHHHTTHHHHHHHHHHHTCEEEE
T ss_pred ccHHHHHHcCCCCEEEEeCCCHHHHHHHHHHHHCCCEEEEeCcHHHHhhHHHHHHHHHHcCCEEEE
Confidence 112223332 279999999877788999999999999999842 222345566779999999976
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.24 E-value=1e-06 Score=97.72 Aligned_cols=122 Identities=14% Similarity=0.216 Sum_probs=89.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEE-EEeCCHHH-----HHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHIT-LGSLLKED-----IDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~Vt-VadR~~ek-----Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
|+||+|+| +|+||+.+++.+.+.++++++ +++|+... +.+++ +... -+.+. ++++++++++|+|
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~----g~~~-gv~v~----~dl~~ll~~~DVV 77 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFL----GKQT-GVALT----DDIERVCAEADYL 77 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTT----TCCC-SCBCB----CCHHHHHHHCSEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHh----CCCC-Cceec----CCHHHHhcCCCEE
Confidence 68999999 899999999999998899865 46776432 11111 1111 11122 3567777789999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 638 VSLLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 638 Is~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
|+++++..+...++.|+++|+|+|.-+ +..++..+|.+.|++ +.++....|..|+.=+
T Consensus 78 IDfT~p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~~--~~vv~a~N~s~Gv~l~ 137 (272)
T 4f3y_A 78 IDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEK--IALVFSANMSVGVNVT 137 (272)
T ss_dssp EECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTTT--SEEEECSCCCHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhcc--CCEEEECCCCHHHHHH
Confidence 999988888899999999999999854 455556778777775 5567788899998543
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=98.24 E-value=4e-06 Score=92.26 Aligned_cols=116 Identities=15% Similarity=0.182 Sum_probs=87.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
+||.|||+|.||..++..|.+. +++|++.||++++++++.+. ++.. . .++.++++++|+||.|+|...
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~--g~~~-----~----~~~~~~~~~aDvvi~~vp~~~ 69 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSPEKAEELAAL--GAER-----A----ATPCEVVESCPVTFAMLADPA 69 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHT--TCEE-----C----SSHHHHHHHCSEEEECCSSHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHC--CCee-----c----CCHHHHHhcCCEEEEEcCCHH
Confidence 7999999999999999999987 57999999999999888764 3332 1 246677788999999999543
Q ss_pred c-HHHH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEeccccCchh
Q psy12817 646 H-HHVA------EFCIQHGKNLVTASYLSP-EMMALHERAASAGITVLNEVGLDPGI 694 (1201)
Q Consensus 646 h-~~Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~e~GlDPGI 694 (1201)
+ ..++ ..+++.|+.++|.|-+.+ ..+++.+.+++.|+.++. ..+..|.
T Consensus 70 ~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~ 125 (287)
T 3pef_A 70 AAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE-APVSGSK 125 (287)
T ss_dssp HHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCH
T ss_pred HHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCH
Confidence 2 3333 244568889999987555 456787888889998875 4444443
|
| >3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=5.2e-07 Score=102.38 Aligned_cols=119 Identities=19% Similarity=0.220 Sum_probs=82.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-------CCe-EEEEeCCHHHHHH------HHHHc--CCeeEEEeecCCCCchHHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-------NIH-ITLGSLLKEDIDK------VTNEF--GRVEATLIDVNNGGSDNLS 628 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-------~~~-VtVadR~~ekAe~------La~~~--~~v~~v~lDV~D~~~e~L~ 628 (1201)
+.||+|+|+|.||+.+++.|.+.+ +++ +.|+||+.+++++ +++.+ ..+..+.-...| .+++-
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~ll 83 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESIS--ASEAL 83 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECC--HHHHH
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCC--HHHHh
Confidence 479999999999999999987654 456 4688888765433 22211 111100000012 22322
Q ss_pred hhccCCcEEEEcCCCc----ccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEec
Q psy12817 629 GLVRSADLVVSLLPYN----LHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNE 687 (1201)
Q Consensus 629 elI~~~DVVIs~lP~~----~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e 687 (1201)
+ .+.|+|+.|+|.. .|.++++.|+++|+|+|++. ......++|.+.|+++|+.++.+
T Consensus 84 ~--~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~e 146 (331)
T 3c8m_A 84 A--RDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYE 146 (331)
T ss_dssp H--SSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECG
T ss_pred C--CCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEE
Confidence 2 3799999999985 78899999999999999963 45667788999999999887543
|
| >2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=98.22 E-value=2.9e-06 Score=96.27 Aligned_cols=97 Identities=11% Similarity=0.165 Sum_probs=75.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEE-------------eecCCCCchHHHhh
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATL-------------IDVNNGGSDNLSGL 630 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~-------------lDV~D~~~e~L~el 630 (1201)
|.||+|+|+|++|+.+++.|.+.+++++ .++|++.+.+..+++.+ +....- +.+. .+.+++
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~-g~~~~~~~~~~v~~~~~~~~~v~----~d~~~l 76 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL-GIPVYAASEEFIPRFEKEGFEVA----GTLNDL 76 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT-TCCEEESSGGGHHHHHHHTCCCS----CBHHHH
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhc-CccccccccccceeccCCceEEc----CcHHHh
Confidence 4699999999999999999998888884 67888888887777654 222100 0122 235556
Q ss_pred ccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCC
Q psy12817 631 VRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYL 666 (1201)
Q Consensus 631 I~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syv 666 (1201)
+.++|+|+.|+|...|.+.++.|+++|+|+++.+..
T Consensus 77 ~~~vDvV~~aTp~~~h~~~a~~~l~aGk~Vi~sap~ 112 (334)
T 2czc_A 77 LEKVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGE 112 (334)
T ss_dssp HTTCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTS
T ss_pred ccCCCEEEECCCccccHHHHHHHHHcCCceEeeccc
Confidence 679999999999999999999999999999987543
|
| >1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=5.5e-07 Score=103.35 Aligned_cols=144 Identities=17% Similarity=0.239 Sum_probs=90.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCC---CCeE-EEEeCCHHHHHHHHHHcCCeeEEEeec-CC-------C-----Cch
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDE---NIHI-TLGSLLKEDIDKVTNEFGRVEATLIDV-NN-------G-----GSD 625 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~---~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV-~D-------~-----~~e 625 (1201)
.++.||+|+|+|.||+.+++.|.+.+ +++| .|+|++.. .++..++++. . .+ . +.+
T Consensus 2 ~k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~---~~~~~~~gi~-----~~~~~~e~l~~~~~~~~did 73 (358)
T 1ebf_A 2 TKVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERS---LISKDFSPLN-----VGSDWKAALAASTTKTLPLD 73 (358)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBE---EECSSCSCCS-----CTTCHHHHHHTCCCBCCCHH
T ss_pred CceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChh---hhccccCCCC-----ccccHHHHHhcccCCCCCHH
Confidence 35689999999999999999998865 4564 46665422 1111111111 1 11 0 012
Q ss_pred HHHhhc---cCCcEEEEcCCCcccHHHHHHHHHcCCeEEEc--cCCh---HHHHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 626 NLSGLV---RSADLVVSLLPYNLHHHVAEFCIQHGKNLVTA--SYLS---PEMMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 626 ~L~elI---~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~--Syvs---~e~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
.+-+.+ ...|+||.|+|...|......|+++|+|+|++ ..++ .+.++|. .|+++|+.++.+..+--|+--
T Consensus 74 ~v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~-~A~~~gv~~~~Ea~vg~giPi- 151 (358)
T 1ebf_A 74 DLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALF-SNKPTNGFVYHEATVGAGLPI- 151 (358)
T ss_dssp HHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHT-CCCTTCCCEECGGGTTTTSSC-
T ss_pred HHHHHhhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHH-HHHHcCCEEEEccccccCCcH-
Confidence 222221 13499999999887877778999999999995 3344 7788898 999999998877543333221
Q ss_pred HHHHHHHHhhhcCCcEEEEEe
Q psy12817 698 LAMECIDAAHLNGGKVESFVS 718 (1201)
Q Consensus 698 lA~~~idei~~~ggkV~sf~s 718 (1201)
.+.+++..+.|++|..+..
T Consensus 152 --i~~l~~~l~~G~~I~~I~G 170 (358)
T 1ebf_A 152 --ISFLREIIQTGDEVEKIEG 170 (358)
T ss_dssp --HHHHHHHHHHTCCEEEEEE
T ss_pred --HHHHHHHHHcCCCeEEEEE
Confidence 1223444445567777654
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.8e-06 Score=90.21 Aligned_cols=75 Identities=20% Similarity=0.331 Sum_probs=64.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+||+|+|.| +|++|+.+++.|.+. +++|++.+|+.++++.+. ++++.+..|+.| .+.+.++++++|+||++++
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~---~~~~~~~~Dl~d--~~~~~~~~~~~d~vi~~a~ 76 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNR-GFEVTAVVRHPEKIKIEN---EHLKVKKADVSS--LDEVCEVCKGADAVISAFN 76 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCGGGCCCCC---TTEEEECCCTTC--HHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCcccchhcc---CceEEEEecCCC--HHHHHHHhcCCCEEEEeCc
Confidence 378999999 699999999999987 489999999988765432 478899999998 8999999999999999986
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 77 ~~ 78 (227)
T 3dhn_A 77 PG 78 (227)
T ss_dssp C-
T ss_pred CC
Confidence 43
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.20 E-value=4.3e-06 Score=93.37 Aligned_cols=113 Identities=14% Similarity=0.219 Sum_probs=84.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
...|+||.|||+|.||..++..|++. +++|++.||++++++++.+. ++.. . .++.++++++|+||.|+
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~l~~~--g~~~-----~----~~~~~~~~~aDvvi~~v 85 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTLSKCDELVEH--GASV-----C----ESPAEVIKKCKYTIAML 85 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHT--TCEE-----C----SSHHHHHHHCSEEEECC
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHC--CCeE-----c----CCHHHHHHhCCEEEEEc
Confidence 35689999999999999999999986 57999999999999888753 3332 1 24667778899999999
Q ss_pred CCccc-HHHH---H---HHHHcCCeEEEccCChHH-HHHHHHHHHHcCCEEEe
Q psy12817 642 PYNLH-HHVA---E---FCIQHGKNLVTASYLSPE-MMALHERAASAGITVLN 686 (1201)
Q Consensus 642 P~~~h-~~Va---k---acIeaGkh~VD~Syvs~e-~~eLde~AkeAGVtil~ 686 (1201)
|...+ ..++ + ..++.|+.++|.|-+.+. .+++.+.+++.|+.++.
T Consensus 86 p~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~ 138 (310)
T 3doj_A 86 SDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE 138 (310)
T ss_dssp SSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 96433 2333 1 234577889999875554 46677777888888765
|
| >2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.19 E-value=7.9e-07 Score=101.10 Aligned_cols=130 Identities=18% Similarity=0.187 Sum_probs=89.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC--------CCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE--------NIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~--------~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
+.||+|+|+|.||+.+++.|.+.+ +++ +.|+||+.++++.+ +... ..- ++++++ +.|
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~----~~~~-~~~--------d~~~ll-~iD 68 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAI----PQEL-LRA--------EPFDLL-EAD 68 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSS----CGGG-EES--------SCCCCT-TCS
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhcc----Cccc-ccC--------CHHHHh-CCC
Confidence 479999999999999999998765 456 46889987654322 1111 111 233455 899
Q ss_pred EEEEcCCCc-ccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEecccc---CchhHHHHHHHHHHHhhhc
Q psy12817 636 LVVSLLPYN-LHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGL---DPGIDHLLAMECIDAAHLN 709 (1201)
Q Consensus 636 VVIs~lP~~-~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~Gl---DPGIdhmlA~~~idei~~~ 709 (1201)
+|+.|+|.. .|.++++.|+++|+|+|+++ ....+.++|.+.|+++ .++-+.-+ -|-++.+- .-.
T Consensus 69 vVve~t~~~~~a~~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~--~~~~Ea~vg~giPii~~l~--------~l~ 138 (332)
T 2ejw_A 69 LVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEG--LIYHEASVMAGTPALSFLE--------TLR 138 (332)
T ss_dssp EEEECCCCSHHHHHHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT--CEECGGGTTTTSSSHHHHH--------HHT
T ss_pred EEEECCCCcHHHHHHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC--CeEEEEEcccCCHHHHHHH--------Hhc
Confidence 999999976 46789999999999999963 4556778888889888 44445333 25454442 124
Q ss_pred CCcEEEEEe
Q psy12817 710 GGKVESFVS 718 (1201)
Q Consensus 710 ggkV~sf~s 718 (1201)
+++|.++..
T Consensus 139 ~~~I~~I~g 147 (332)
T 2ejw_A 139 GSELLELHG 147 (332)
T ss_dssp TSEEEEEEE
T ss_pred CCCcceEEE
Confidence 466766653
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=98.19 E-value=6.2e-06 Score=90.85 Aligned_cols=96 Identities=11% Similarity=0.226 Sum_probs=75.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH------HHHHHHHH-HcCCeeEEEeecCCCCchHHHhhccCC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK------EDIDKVTN-EFGRVEATLIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~------ekAe~La~-~~~~v~~v~lDV~D~~~e~L~elI~~~ 634 (1201)
.+|++|+|+| +|++|+.+++.|++. +++|++.+|+. ++++.+.. ..++++.+..|+.| .+.+.++++++
T Consensus 2 ~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d--~~~l~~a~~~~ 78 (321)
T 3c1o_A 2 SHMEKIIIYGGTGYIGKFMVRASLSF-SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEE--HEKMVSVLKQV 78 (321)
T ss_dssp --CCCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTC--HHHHHHHHTTC
T ss_pred CcccEEEEEcCCchhHHHHHHHHHhC-CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCC--HHHHHHHHcCC
Confidence 3578999999 699999999999987 47899999985 44444322 12478999999998 89999999999
Q ss_pred cEEEEcCCC---cccHHHHHHHHHcC-C-eEE
Q psy12817 635 DLVVSLLPY---NLHHHVAEFCIQHG-K-NLV 661 (1201)
Q Consensus 635 DVVIs~lP~---~~h~~VakacIeaG-k-h~V 661 (1201)
|+||++++. .....++++|.++| + ++|
T Consensus 79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 79 DIVISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp SEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred CEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 999999864 34577888888887 4 565
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.17 E-value=7.4e-06 Score=91.40 Aligned_cols=112 Identities=13% Similarity=0.120 Sum_probs=83.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
..++||+|||+|.||.+++..|.+. +++|++.||++++++++.+. ++.. ..++.++++++|+||.|+|
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~~~~~--g~~~---------~~~~~e~~~~aDvVi~~vp 74 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSPGKAAALVAA--GAHL---------CESVKAALSASPATIFVLL 74 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHH--TCEE---------CSSHHHHHHHSSEEEECCS
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHC--CCee---------cCCHHHHHhcCCEEEEEeC
Confidence 4568999999999999999999986 57899999999999988764 3331 1246677788999999999
Q ss_pred Cccc-HHHHH----HHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 643 YNLH-HHVAE----FCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~~h-~~Vak----acIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
...+ ..++. ..+..|+.++|.|-+++ ..+++.+.+++.|+.++.
T Consensus 75 ~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vd 124 (306)
T 3l6d_A 75 DNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVK 124 (306)
T ss_dssp SHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 6543 22322 23467888999876443 456777777888888765
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.1e-06 Score=91.17 Aligned_cols=76 Identities=28% Similarity=0.319 Sum_probs=65.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.||+|+|.| +|++|+.+++.|++.+.++|++.+|+.++++++.. .++..+..|+.| .+.+.++++++|+||++++
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~--~~~~~~~~Dl~d--~~~~~~~~~~~D~vv~~a~ 97 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP--TNSQIIMGDVLN--HAALKQAMQGQDIVYANLT 97 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC--TTEEEEECCTTC--HHHHHHHHTTCSEEEEECC
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc--CCcEEEEecCCC--HHHHHHHhcCCCEEEEcCC
Confidence 478999999 79999999999998865899999999887655432 368899999998 8999999999999999986
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 98 ~ 98 (236)
T 3qvo_A 98 G 98 (236)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=98.16 E-value=3e-06 Score=95.51 Aligned_cols=92 Identities=17% Similarity=0.230 Sum_probs=73.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCCe-EEEEeCCHHH-HHHHHHHcCCeeEEEeecCCCCchHHHhhc-----cCCcE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENIH-ITLGSLLKED-IDKVTNEFGRVEATLIDVNNGGSDNLSGLV-----RSADL 636 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~~-VtVadR~~ek-Ae~La~~~~~v~~v~lDV~D~~~e~L~elI-----~~~DV 636 (1201)
+.||+|||+|.+|+.+++.|.+ .++.+ +.++|+++++ ++++++.++ +... .+ .+++++ .+.|+
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g-~~~~----~~----~~e~ll~~~~~~~iDv 74 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMG-VTTT----YA----GVEGLIKLPEFADIDF 74 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTT-CCEE----SS----HHHHHHHSGGGGGEEE
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcC-CCcc----cC----CHHHHHhccCCCCCcE
Confidence 5799999999999999999976 77777 5688999888 778887773 3321 12 233333 46899
Q ss_pred EEEcCCCcccHHHHHHHHHc--CCeEEEccC
Q psy12817 637 VVSLLPYNLHHHVAEFCIQH--GKNLVTASY 665 (1201)
Q Consensus 637 VIs~lP~~~h~~VakacIea--Gkh~VD~Sy 665 (1201)
|+.|+|...|.+++..|+++ |+|++|++.
T Consensus 75 V~~atp~~~h~~~a~~al~a~~Gk~Vi~ekp 105 (312)
T 1nvm_B 75 VFDATSASAHVQNEALLRQAKPGIRLIDLTP 105 (312)
T ss_dssp EEECSCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred EEECCChHHHHHHHHHHHHhCCCCEEEEcCc
Confidence 99999999999999999999 999999864
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=98.16 E-value=6.2e-06 Score=90.01 Aligned_cols=95 Identities=14% Similarity=0.123 Sum_probs=74.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-------HHHHHHHH-HcCCeeEEEeecCCCCchHHHhhccCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-------EDIDKVTN-EFGRVEATLIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-------ekAe~La~-~~~~v~~v~lDV~D~~~e~L~elI~~~ 634 (1201)
+|++|+|.| +|++|+.+++.|++.+ ++|++.+|+. ++++.+.. ..++++.+..|+.| .+.+.++++++
T Consensus 1 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d--~~~l~~~~~~~ 77 (307)
T 2gas_A 1 TENKILILGPTGAIGRHIVWASIKAG-NPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND--HETLVKAIKQV 77 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHHT-CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC--HHHHHHHHTTC
T ss_pred CCcEEEEECCCchHHHHHHHHHHhCC-CcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC--HHHHHHHHhCC
Confidence 368999999 5999999999999874 7899999986 66654432 12478899999998 88999999999
Q ss_pred cEEEEcCCCc---ccHHHHHHHHHcC-C-eEE
Q psy12817 635 DLVVSLLPYN---LHHHVAEFCIQHG-K-NLV 661 (1201)
Q Consensus 635 DVVIs~lP~~---~h~~VakacIeaG-k-h~V 661 (1201)
|+||++++.. ....++++|.++| + ++|
T Consensus 78 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 78 DIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp SEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred CEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence 9999998642 2356677777776 3 444
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1.1e-05 Score=84.97 Aligned_cols=76 Identities=16% Similarity=0.198 Sum_probs=65.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++++|+|.| +|++|+.+++.|++.+ +++|++.+|+.++++.+ ..++..+..|+.| .+.+.++++++|+||++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~D~~d--~~~~~~~~~~~d~vi~~ 76 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---GGEADVFIGDITD--ADSINPAFQGIDALVIL 76 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---TCCTTEEECCTTS--HHHHHHHHTTCSEEEEC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---CCCeeEEEecCCC--HHHHHHHHcCCCEEEEe
Confidence 3578999999 7999999999999985 68999999998877655 2367888999998 88999999999999999
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 77 a~~ 79 (253)
T 1xq6_A 77 TSA 79 (253)
T ss_dssp CCC
T ss_pred ccc
Confidence 853
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=98.14 E-value=8.9e-06 Score=89.48 Aligned_cols=116 Identities=19% Similarity=0.316 Sum_probs=86.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
++||+|||+|.||..++..|.+. +++|++.+|++++++++.+. ++.. .+ ++.++++++|+||.|+|..
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~~--g~~~-----~~----~~~~~~~~~D~vi~~vp~~ 71 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE-GVTVYAFDLMEANVAAVVAQ--GAQA-----CE----NNQKVAAASDIIFTSLPNA 71 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHHTT--TCEE-----CS----SHHHHHHHCSEEEECCSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHC--CCee-----cC----CHHHHHhCCCEEEEECCCH
Confidence 57999999999999999999886 57899999999999887654 3331 22 3555667899999999876
Q ss_pred cc-HHHHH------HHHHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 645 LH-HHVAE------FCIQHGKNLVTASYLS-PEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 645 ~h-~~Vak------acIeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
.+ ..++. .+++.|+.+++.+-.. ...+++.+.+++.|+.+++ ..+.+|
T Consensus 72 ~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~-~p~~~~ 127 (301)
T 3cky_A 72 GIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD-APVSGG 127 (301)
T ss_dssp HHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE-CCEESH
T ss_pred HHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE-ccCCCC
Confidence 54 33332 3456789999987654 4567787778888988875 344444
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=1.8e-05 Score=86.44 Aligned_cols=128 Identities=14% Similarity=0.138 Sum_probs=90.8
Q ss_pred CeEEEEcC-chhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLGA-GYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGA-G~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+||+|+|+ |.||+.+++.+.+.++++++ ++++. .| .+.+.. .++|+||+++++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------------~d--l~~~~~--~~~DvvIDfT~p 55 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------------DP--LSLLTD--GNTEVVIDFTHP 55 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------------CC--THHHHH--TTCCEEEECSCT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------------CC--HHHHhc--cCCcEEEEccCh
Confidence 48999996 99999999999887788865 45543 11 222221 379999999977
Q ss_pred cccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHc-CCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEEeec
Q psy12817 644 NLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASA-GITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYC 720 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeA-GVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~s~c 720 (1201)
..+...++.|+++|+++|..+ +..++...|.+.|+++ ++.++....+..|+.-++. +++++-+.-..|+-++...
T Consensus 56 ~a~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~--l~~~aa~~~~dieIiE~HH 133 (245)
T 1p9l_A 56 DVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMH--FAKQAARFFDSAEVIELHH 133 (245)
T ss_dssp TTHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHH--HHHHHGGGCSEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHH--HHHHHHhhcCCEEEEECcc
Confidence 888999999999999988854 4555567788888877 8888887888888765433 3333322223555555544
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.14 E-value=8.9e-06 Score=89.01 Aligned_cols=90 Identities=13% Similarity=0.152 Sum_probs=70.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC-----HHHHHHHHHH-cCCeeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL-----KEDIDKVTNE-FGRVEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~-----~ekAe~La~~-~~~v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
|++|+|+| +|++|+.+++.|.+. +++|++.+|+ +++++.+... .++++.+..|+.| .+.+.++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~l~~~~~~~d~v 80 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD--HQRLVDALKQVDVV 80 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSC--HHHHHHHHTTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCC--HHHHHHHHhCCCEE
Confidence 68999999 699999999999987 4789999998 5555544321 2478899999998 89999999999999
Q ss_pred EEcCCCc-------ccHHHHHHHHHcC
Q psy12817 638 VSLLPYN-------LHHHVAEFCIQHG 657 (1201)
Q Consensus 638 Is~lP~~-------~h~~VakacIeaG 657 (1201)
|++++.. ....++++|.++|
T Consensus 81 i~~a~~~~~~~~~~~~~~l~~aa~~~g 107 (313)
T 1qyd_A 81 ISALAGGVLSHHILEQLKLVEAIKEAG 107 (313)
T ss_dssp EECCCCSSSSTTTTTHHHHHHHHHHSC
T ss_pred EECCccccchhhHHHHHHHHHHHHhcC
Confidence 9998643 1245566666665
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=1.1e-05 Score=78.06 Aligned_cols=112 Identities=12% Similarity=0.154 Sum_probs=79.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP 642 (1201)
+|++|+|+|+|.+|+.+++.|.+. +.+|++++++.++++.+... +...+..|..+ .+.+.++ ++++|+||.++|
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~~~~~~~~~~~--~~~~~~~d~~~--~~~l~~~~~~~~d~vi~~~~ 79 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRM-GHEVLAVDINEEKVNAYASY--ATHAVIANATE--ENELLSLGIRNFEYVIVAIG 79 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-TCCCEEEESCHHHHHTTTTT--CSEEEECCTTC--HHHHHTTTGGGCSEEEECCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh--CCEEEEeCCCC--HHHHHhcCCCCCCEEEECCC
Confidence 467899999999999999999886 47899999999888765542 35566778877 6777776 788999999998
Q ss_pred Cc--ccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 643 YN--LHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 643 ~~--~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
.. .+..++..|.+.+...+-..-..+... +..++.|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~---~~l~~~g~~ 119 (144)
T 2hmt_A 80 ANIQASTLTTLLLKELDIPNIWVKAQNYYHH---KVLEKIGAD 119 (144)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCSHHHH---HHHHHHTCS
T ss_pred CchHHHHHHHHHHHHcCCCeEEEEeCCHHHH---HHHHHcCCC
Confidence 64 334566777777765433322222222 234556774
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=98.13 E-value=2.7e-06 Score=95.02 Aligned_cols=127 Identities=12% Similarity=0.170 Sum_probs=89.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEE-EEeCCHHH--HHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHIT-LGSLLKED--IDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~Vt-VadR~~ek--Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
.|.||+|+| +|+||+.+++.+.+.++++++ +++++... .+.+. .+-++...-+-+. +++++++.++|+||+
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~g-el~G~~~~gv~v~----~dl~~ll~~aDVvID 94 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDAS-ILIGSDFLGVRIT----DDPESAFSNTEGILD 94 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGG-GGTTCSCCSCBCB----SCHHHHTTSCSEEEE
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchH-HhhccCcCCceee----CCHHHHhcCCCEEEE
Confidence 467999999 899999999999998899854 55776421 11111 1111111111122 357778889999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
++++..+...++.|+++|+++|.-+ +..+...+|.+.|++ +.++..-.|..|+.-+
T Consensus 95 FT~p~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~~--~~~~~a~N~SiGv~ll 152 (288)
T 3ijp_A 95 FSQPQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAKY--TTIVKSGNMSLGVNLL 152 (288)
T ss_dssp CSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHTT--SEEEECSCCCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhCc--CCEEEECCCcHHHHHH
Confidence 9987778889999999999999853 455566678777775 6667778888998544
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.12 E-value=2.7e-05 Score=76.85 Aligned_cols=112 Identities=16% Similarity=0.207 Sum_probs=82.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP 642 (1201)
.+.+|+|+|+|.+|+.+++.|.+. +++|++.++++++++.+.+ .++..+..|.++ ++.+.++ +.++|+||.++|
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~--~g~~~i~gd~~~--~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRE--RGVRAVLGNAAN--EEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHH--TTCEEEESCTTS--HHHHHHTTGGGCSEEEECCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHH--cCCCEEECCCCC--HHHHHhcCcccCCEEEEECC
Confidence 357899999999999999999886 5789999999999988775 267888899987 7777764 678999999998
Q ss_pred Cccc-HHHHHHHHHc--CCeEEEccCChHHHHHHHHHHHHcCCEE
Q psy12817 643 YNLH-HHVAEFCIQH--GKNLVTASYLSPEMMALHERAASAGITV 684 (1201)
Q Consensus 643 ~~~h-~~VakacIea--Gkh~VD~Syvs~e~~eLde~AkeAGVti 684 (1201)
.... ..++..+-+. +.+++........... .++.|+..
T Consensus 81 ~~~~n~~~~~~a~~~~~~~~iiar~~~~~~~~~----l~~~G~d~ 121 (140)
T 3fwz_A 81 NGYEAGEIVASARAKNPDIEIIARAHYDDEVAY----ITERGANQ 121 (140)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEEESSHHHHHH----HHHTTCSE
T ss_pred ChHHHHHHHHHHHHHCCCCeEEEEECCHHHHHH----HHHCCCCE
Confidence 6543 3344444333 4555555444443333 45678753
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.8e-06 Score=91.62 Aligned_cols=110 Identities=15% Similarity=0.192 Sum_probs=82.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|+||.|||+|.||..++..|.+. +++|++.||++++++++.+. ++.. . .++.++++++|+||.|+|..
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~--g~~~-----~----~~~~~~~~~advvi~~v~~~ 68 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNPAKCAPLVAL--GARQ-----A----SSPAEVCAACDITIAMLADP 68 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH-TCCEEEECSSGGGGHHHHHH--TCEE-----C----SCHHHHHHHCSEEEECCSSH
T ss_pred CCeEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHC--CCee-----c----CCHHHHHHcCCEEEEEcCCH
Confidence 68999999999999999999986 47899999999999888764 3332 1 24666777899999999965
Q ss_pred cc-HHHH---H---HHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 645 LH-HHVA---E---FCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h-~~Va---k---acIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.+ ..++ + ..++.|+.++|.|-..+ ..+++.+.+++.|+.++.
T Consensus 69 ~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pdu_A 69 AAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLE 118 (287)
T ss_dssp HHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 32 2333 1 23456788999886554 446677777788887765
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.11 E-value=7.7e-06 Score=84.61 Aligned_cols=70 Identities=11% Similarity=0.108 Sum_probs=60.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|||+|+| +|++|+.+++.|+++ +++|++.+|+.++++.+. ++++.+..|+.| .+. +.+.++|+||++++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~---~~~~~~~~D~~d--~~~--~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR-GHEVTAIVRNAGKITQTH---KDINILQKDIFD--LTL--SDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCSHHHHHHC---SSSEEEECCGGG--CCH--HHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCchhhhhcc---CCCeEEeccccC--hhh--hhhcCCCEEEECCcC
Confidence 5899999 699999999999987 489999999998887765 578999999998 555 677899999999965
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=98.11 E-value=1.1e-05 Score=88.70 Aligned_cols=110 Identities=19% Similarity=0.366 Sum_probs=81.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
++||+|||+|.||..++..|.+. +++|++.||+.++++.+.+. ++.. . .++.++++++|+||.|+|..
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~~--g~~~-----~----~~~~~~~~~~D~vi~~v~~~ 72 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRNPEAIADVIAA--GAET-----A----STAKAIAEQCDVIITMLPNS 72 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT--TCEE-----C----SSHHHHHHHCSEEEECCSSH
T ss_pred cceEEEECchHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHC--CCee-----c----CCHHHHHhCCCEEEEECCCH
Confidence 36999999999999999999886 57899999999999887754 3331 1 13555667899999999965
Q ss_pred cc-HHHH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 645 LH-HHVA------EFCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h-~~Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.+ ..++ ..+++.|+.+++.+-..+ ..+++.+.+++.|+.++.
T Consensus 73 ~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~ 122 (299)
T 1vpd_A 73 PHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLD 122 (299)
T ss_dssp HHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 54 3333 244567888999876544 466777777777887764
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.11 E-value=4e-06 Score=94.36 Aligned_cols=78 Identities=15% Similarity=0.305 Sum_probs=66.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecC-CCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVN-NGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~-D~~~e~L~elI~~~DVVIs~ 640 (1201)
.+||+|+|.| +|++|+.+++.|.++++++|++.+|+.++++.+.. .++++.+..|+. | .+.+.++++++|+||+|
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~v~~~~~Dl~~d--~~~~~~~~~~~d~Vih~ 98 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-HERMHFFEGDITIN--KEWVEYHVKKCDVILPL 98 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-STTEEEEECCTTTC--HHHHHHHHHHCSEEEEC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-CCCeEEEeCccCCC--HHHHHHHhccCCEEEEc
Confidence 3578999999 79999999999998767899999999877665543 247999999999 7 88899999999999998
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 99 A~~ 101 (372)
T 3slg_A 99 VAI 101 (372)
T ss_dssp BCC
T ss_pred Ccc
Confidence 753
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.09 E-value=1.2e-05 Score=87.65 Aligned_cols=94 Identities=15% Similarity=0.150 Sum_probs=73.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC------HHHHHHHHHH-cCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL------KEDIDKVTNE-FGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~------~ekAe~La~~-~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
|++|+|+| +|++|+.+++.|++.+ ++|++.+|+ +++++.+... ..+++.+..|+.| .+.+.++++++|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d--~~~l~~~~~~~d~ 80 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD--HASLVEAVKNVDV 80 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTC--HHHHHHHHHTCSE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCC--HHHHHHHHcCCCE
Confidence 68999999 5999999999999874 789999997 4444433221 2478899999998 8899999999999
Q ss_pred EEEcCCCc---ccHHHHHHHHHcC-C-eEE
Q psy12817 637 VVSLLPYN---LHHHVAEFCIQHG-K-NLV 661 (1201)
Q Consensus 637 VIs~lP~~---~h~~VakacIeaG-k-h~V 661 (1201)
||++++.. ....++++|.++| + ++|
T Consensus 81 vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 81 VISTVGSLQIESQVNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp EEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred EEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence 99998642 3467778888777 4 454
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=7.1e-06 Score=85.71 Aligned_cols=73 Identities=18% Similarity=0.353 Sum_probs=62.5
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||+|.| +|++|+.+++.|++. +++|++.+|+.++++.+ ++++.+..|+.| ..+.+.++++++|+||+++...
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~----~~~~~~~~D~~d-~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKVEQVPQY----NNVKAVHFDVDW-TPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS-SCEEEEEESSGGGSCCC----TTEEEEECCTTS-CHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCccchhhc----CCceEEEecccC-CHHHHHHHHcCCCEEEECCcCC
Confidence 4899999 799999999999987 58999999998865543 578999999985 3678999999999999998643
|
| >1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A | Back alignment and structure |
|---|
Probab=98.07 E-value=1.2e-06 Score=98.98 Aligned_cols=113 Identities=15% Similarity=0.132 Sum_probs=83.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcCC--eeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFGR--VEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~~--v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..++|+|||+|.+|+.+++.|.+ .+..+|+|+||++++++++++.+.. +... +. ++++++ ++|+||+|
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~---~~-----~~~e~v-~aDvVi~a 194 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS---VQ-----PAEEAS-RCDVLVTT 194 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE---EC-----CHHHHT-SSSEEEEC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE---EC-----CHHHHh-CCCEEEEe
Confidence 45799999999999999999987 3455799999999999999987631 2221 22 366777 89999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEe
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~ 686 (1201)
+|... +.+-..+++.|+|++|++...+.+++++....+.+..++.
T Consensus 195 Tp~~~-pv~~~~~l~~G~~V~~ig~~~p~~~el~~~~~~~a~v~vD 239 (322)
T 1omo_A 195 TPSRK-PVVKAEWVEEGTHINAIGADGPGKQELDVEILKKAKIVVD 239 (322)
T ss_dssp CCCSS-CCBCGGGCCTTCEEEECSCCSTTCCCBCHHHHHTEEEEES
T ss_pred eCCCC-ceecHHHcCCCeEEEECCCCCCCccccCHHHHhcCeEEEC
Confidence 99643 2222467899999999964445577777666666655543
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.8e-05 Score=87.92 Aligned_cols=112 Identities=13% Similarity=0.144 Sum_probs=82.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+++||+|||+|.||..++..|++. +++|++.||++++++++.+. +..... .++.++++++|+||.|+|.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~--g~~~~~--------~~~~e~~~~aDvvi~~vp~ 74 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA-GLSTWGADLNPQACANLLAE--GACGAA--------ASAREFAGVVDALVILVVN 74 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT--TCSEEE--------SSSTTTTTTCSEEEECCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHc--CCcccc--------CCHHHHHhcCCEEEEECCC
Confidence 457999999999999999999986 57999999999999988764 333211 1345567889999999997
Q ss_pred ccc-HHHH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 644 NLH-HHVA------EFCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 644 ~~h-~~Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
..+ ..++ ...++.|+.++|.|-+.+ ..+++.+..++.|+.++.
T Consensus 75 ~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 75 AAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp HHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 533 2222 123567888999886555 446677777788888765
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=6e-06 Score=90.07 Aligned_cols=108 Identities=23% Similarity=0.232 Sum_probs=78.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|+||+|||+|.||..++..|.+ +++|++.+|+.++++++.+. ++... + +.++++++|+||.|+|..
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~--g~~V~~~~~~~~~~~~~~~~--g~~~~--~--------~~~~~~~~D~vi~~v~~~ 66 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR--RFPTLVWNRTFEKALRHQEE--FGSEA--V--------PLERVAEARVIFTCLPTT 66 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT--TSCEEEECSSTHHHHHHHHH--HCCEE--C--------CGGGGGGCSEEEECCSSH
T ss_pred CCeEEEEcccHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHC--CCccc--C--------HHHHHhCCCEEEEeCCCh
Confidence 5799999999999999999987 57899999999998887654 23221 1 334567899999999976
Q ss_pred cc-HHHHHH---HHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 645 LH-HHVAEF---CIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h-~~Vaka---cIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.+ ..+++. +++.|+++++.+...+ ..+++.+.+++.|+.++.
T Consensus 67 ~~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~ 113 (289)
T 2cvz_A 67 REVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLD 113 (289)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 53 334432 3456788999876554 456677777777776654
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=98.05 E-value=1.2e-05 Score=87.81 Aligned_cols=75 Identities=12% Similarity=0.112 Sum_probs=63.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHH--HHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDI--DKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekA--e~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+|+|+|.| +|++|+.+++.|.+.++++|++.+|+.++. +.+.. ++++.+..|+.| .+.+.++++++|+||++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~--~~~~~~~~D~~d--~~~l~~~~~~~d~vi~~a 80 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL--QGAEVVQGDQDD--QVIMELALNGAYATFIVT 80 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH--TTCEEEECCTTC--HHHHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH--CCCEEEEecCCC--HHHHHHHHhcCCEEEEeC
Confidence 57999999 599999999999987558999999987654 33332 478899999998 899999999999999998
Q ss_pred CC
Q psy12817 642 PY 643 (1201)
Q Consensus 642 P~ 643 (1201)
+.
T Consensus 81 ~~ 82 (299)
T 2wm3_A 81 NY 82 (299)
T ss_dssp CH
T ss_pred CC
Confidence 63
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=2.8e-05 Score=77.83 Aligned_cols=115 Identities=11% Similarity=0.196 Sum_probs=76.9
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEc
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~ 640 (1201)
....++|+|+|+|.+|+.+++.|.+. +.+|++++|++++++.+.... +...+..|..+ .+.+.+. ++++|+||.|
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~-g~~~~~~d~~~--~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEF-SGFTVVGDAAE--FETLKECGMEKADMVFAF 91 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTC-CSEEEESCTTS--HHHHHTTTGGGCSEEEEC
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcC-CCcEEEecCCC--HHHHHHcCcccCCEEEEE
Confidence 34568999999999999999999886 469999999998877654222 45566667766 6667765 7889999999
Q ss_pred CCCcc-cHHHHHHHHH-cCCe-EEEccCChHHHHHHHHHHHHcCCEE
Q psy12817 641 LPYNL-HHHVAEFCIQ-HGKN-LVTASYLSPEMMALHERAASAGITV 684 (1201)
Q Consensus 641 lP~~~-h~~VakacIe-aGkh-~VD~Syvs~e~~eLde~AkeAGVti 684 (1201)
+|... ...++..+-+ .+.. ++......... +..++.|+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~----~~l~~~G~~v 134 (155)
T 2g1u_A 92 TNDDSTNFFISMNARYMFNVENVIARVYDPEKI----KIFEENGIKT 134 (155)
T ss_dssp SSCHHHHHHHHHHHHHTSCCSEEEEECSSGGGH----HHHHTTTCEE
T ss_pred eCCcHHHHHHHHHHHHHCCCCeEEEEECCHHHH----HHHHHCCCcE
Confidence 98643 3334444444 4433 44333322222 2344577763
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=1e-05 Score=82.65 Aligned_cols=73 Identities=14% Similarity=0.143 Sum_probs=62.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|+|+|+| +|++|+.+++.|.+. +++|++.+|+.++.+.+. .++++.+..|+.| .+.+.++++++|+||++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~--~~~~~~~~~D~~~--~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEG--PRPAHVVVGDVLQ--AADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSS--CCCSEEEESCTTS--HHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeChhhccccc--CCceEEEEecCCC--HHHHHHHHcCCCEEEECccC
Confidence 7899999 599999999999987 489999999987654321 2468889999998 88999999999999999864
|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=8e-06 Score=91.02 Aligned_cols=108 Identities=15% Similarity=0.156 Sum_probs=79.4
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+.+||+|+|+ |++|+.+++++.+. +++ .++..++.+.. ...-+++. . .+++++.+ ++|+||.+
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~-g~~-~V~~V~p~~~g---~~~~G~~v-----y----~sl~el~~~~~~D~viI~ 71 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAY-GTK-MVGGVTPGKGG---TTHLGLPV-----F----NTVREAVAATGATASVIY 71 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCE-EEEEECTTCTT---CEETTEEE-----E----SSHHHHHHHHCCCEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCe-EEEEeCCCccc---ceeCCeec-----c----CCHHHHhhcCCCCEEEEe
Confidence 4689999997 99999999999876 566 33344443220 01113332 1 23555665 89999999
Q ss_pred CCCcccHHHHHHHHHcCCeE-EEcc--CChHHHHHHHHHHHHcCCEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNL-VTAS--YLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~-VD~S--yvs~e~~eLde~AkeAGVtil 685 (1201)
+|...|.++++.|+++|+|. |..+ +..++++++.+.|+++|+.++
T Consensus 72 tP~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 72 VPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI 119 (288)
T ss_dssp CCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 99999999999999999996 4444 345567899999999999887
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=1.6e-05 Score=87.62 Aligned_cols=95 Identities=13% Similarity=0.191 Sum_probs=73.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHH-HcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTN-EFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~-~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
+|++|+|+| +|++|+.+++.|++. +++|++.+|+.+ +++.+.. .-++++.+..|+.| .+.+.++++++|+||++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d--~~~l~~a~~~~d~vi~~ 86 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKL-GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDE--HEKLVELMKKVDVVISA 86 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTC--HHHHHHHHTTCSEEEEC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHC-CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCC--HHHHHHHHcCCCEEEEC
Confidence 346899999 699999999999987 478999999874 4433321 12478999999998 89999999999999999
Q ss_pred CCCc---ccHHHHHHHHHcC-C-eEE
Q psy12817 641 LPYN---LHHHVAEFCIQHG-K-NLV 661 (1201)
Q Consensus 641 lP~~---~h~~VakacIeaG-k-h~V 661 (1201)
++.. ....++++|.++| + ++|
T Consensus 87 a~~~~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 87 LAFPQILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp CCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred CchhhhHHHHHHHHHHHhcCCCCEEE
Confidence 8642 3466777777776 4 444
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=98.02 E-value=2.7e-05 Score=87.15 Aligned_cols=111 Identities=12% Similarity=0.107 Sum_probs=79.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCC--HHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLL--KEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~--~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.|+||+|||+|.||..++..|.+.+ + +|++.||+ .++++.+.+ . ++.. . .++.++++++|+||.|
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G-~~~V~~~dr~~~~~~~~~~~~-~-g~~~-----~----~~~~e~~~~aDvVi~~ 90 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAG-AIDMAAYDAASAESWRPRAEE-L-GVSC-----K----ASVAEVAGECDVIFSL 90 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHS-CCEEEEECSSCHHHHHHHHHH-T-TCEE-----C----SCHHHHHHHCSEEEEC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCC-CCeEEEEcCCCCHHHHHHHHH-C-CCEE-----e----CCHHHHHhcCCEEEEe
Confidence 4789999999999999999999874 6 89999997 566665544 2 3332 1 2456677789999999
Q ss_pred CCCcccHHHHHHHH---HcCCeEEEccCChH-HHHHHHHHHHHc--CCEEEe
Q psy12817 641 LPYNLHHHVAEFCI---QHGKNLVTASYLSP-EMMALHERAASA--GITVLN 686 (1201)
Q Consensus 641 lP~~~h~~VakacI---eaGkh~VD~Syvs~-e~~eLde~AkeA--GVtil~ 686 (1201)
+|......+++... +.++-++|.|-+.+ ..+++.+..++. |+.++.
T Consensus 91 vp~~~~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd 142 (312)
T 3qsg_A 91 VTAQAALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAA 142 (312)
T ss_dssp SCTTTHHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred cCchhHHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEe
Confidence 99887766665443 45677888876544 455666666666 777654
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.02 E-value=2.7e-05 Score=82.17 Aligned_cols=111 Identities=17% Similarity=0.210 Sum_probs=82.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~~ 644 (1201)
|||+|+|+|.+|+.+++.|.+. +++|++++++++++++++... +...+..|.++ .+.+.++ ++++|+||.++|..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~l~~~~-~~~~i~gd~~~--~~~l~~a~i~~ad~vi~~~~~d 76 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-KYGVVIINKDRELCEEFAKKL-KATIIHGDGSH--KEILRDAEVSKNDVVVILTPRD 76 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHHS-SSEEEESCTTS--HHHHHHHTCCTTCEEEECCSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHc-CCeEEEcCCCC--HHHHHhcCcccCCEEEEecCCc
Confidence 5899999999999999999886 578999999999999887665 67888999998 7788776 88999999999865
Q ss_pred c-cHHHHHHHHH-cCC-eEEEccCChHHHHHHHHHHHHcCCEE
Q psy12817 645 L-HHHVAEFCIQ-HGK-NLVTASYLSPEMMALHERAASAGITV 684 (1201)
Q Consensus 645 ~-h~~VakacIe-aGk-h~VD~Syvs~e~~eLde~AkeAGVti 684 (1201)
. +..++..+-+ .+. +++........... .++.|+..
T Consensus 77 ~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~----l~~~G~d~ 115 (218)
T 3l4b_C 77 EVNLFIAQLVMKDFGVKRVVSLVNDPGNMEI----FKKMGITT 115 (218)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECCCSGGGHHH----HHHHTCEE
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeCcchHHH----HHHCCCCE
Confidence 3 3334444444 344 45544333332222 35678763
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=98.02 E-value=1e-05 Score=84.26 Aligned_cols=71 Identities=14% Similarity=0.113 Sum_probs=60.8
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|||+|.| +|++|+.+++.|+++ +++|++.+|+.++++.+.. ++++.+..|+.| .+. +.++++|+||+++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~--~~~~~~~~D~~d--~~~--~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR-GHEVLAVVRDPQKAADRLG--ATVATLVKEPLV--LTE--ADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHTC--TTSEEEECCGGG--CCH--HHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecccccccccC--CCceEEeccccc--ccH--hhcccCCEEEECCcc
Confidence 5799999 599999999999987 5899999999998876643 478999999998 555 777899999999865
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.01 E-value=2.9e-05 Score=79.41 Aligned_cols=114 Identities=13% Similarity=0.129 Sum_probs=80.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh--ccCCcEEEEcC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL--VRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el--I~~~DVVIs~l 641 (1201)
..++|+|+|+|.+|+.+++.|.+..+++|+++|+++++++.+... ++..+..|..+ .+.+.++ ++++|+||.|+
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~--g~~~~~gd~~~--~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE--GRNVISGDATD--PDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT--TCCEEECCTTC--HHHHHTBCSCCCCCEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC--CCCEEEcCCCC--HHHHHhccCCCCCCEEEEeC
Confidence 357899999999999999999875247899999999998887642 56777788887 7778877 88999999999
Q ss_pred CCcc-cHHHHHHHHHcC--CeEEEccCChHHHHHHHHHHHHcCCEEE
Q psy12817 642 PYNL-HHHVAEFCIQHG--KNLVTASYLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 642 P~~~-h~~VakacIeaG--kh~VD~Syvs~e~~eLde~AkeAGVtil 685 (1201)
|... ...++..+-+.+ ..++.......... ..++.|+..+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~----~l~~~G~~~v 156 (183)
T 3c85_A 114 PHHQGNQTALEQLQRRNYKGQIAAIAEYPDQLE----GLLESGVDAA 156 (183)
T ss_dssp SSHHHHHHHHHHHHHTTCCSEEEEEESSHHHHH----HHHHHTCSEE
T ss_pred CChHHHHHHHHHHHHHCCCCEEEEEECCHHHHH----HHHHcCCCEE
Confidence 8642 334444444544 23444333322222 3456677543
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.01 E-value=3.2e-05 Score=85.84 Aligned_cols=112 Identities=14% Similarity=0.168 Sum_probs=82.2
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.+++.|...+ .+|+++||+.++++.+. .+ ++..+ + .+.+.++++++|+|++++|
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~dr~~~~~~~~~-~~-g~~~~--~-----~~~l~~~l~~aDvVi~~~p 222 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALG-AKVKVGARESDLLARIA-EM-GMEPF--H-----ISKAAQELRDVDVCINTIP 222 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHH-HT-TSEEE--E-----GGGHHHHTTTCSEEEECCS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHH-HC-CCeec--C-----hhhHHHHhcCCCEEEECCC
Confidence 45689999999999999999998764 69999999998776654 33 44422 2 2457888899999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEe
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~ 686 (1201)
..+-..-.-.+++.|.-++|+++..... ++ +.+++.|+.++.
T Consensus 223 ~~~i~~~~l~~mk~~~~lin~ar~~~~~-~~-~~a~~~Gv~~~~ 264 (293)
T 3d4o_A 223 ALVVTANVLAEMPSHTFVIDLASKPGGT-DF-RYAEKRGIKALL 264 (293)
T ss_dssp SCCBCHHHHHHSCTTCEEEECSSTTCSB-CH-HHHHHHTCEEEE
T ss_pred hHHhCHHHHHhcCCCCEEEEecCCCCCC-CH-HHHHHCCCEEEE
Confidence 7543222334567888999998743222 23 667888998763
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=98.01 E-value=2.1e-05 Score=90.24 Aligned_cols=116 Identities=12% Similarity=0.223 Sum_probs=86.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCC---cEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSA---DLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~---DVVIs~l 641 (1201)
++||+|||+|.||..++..|++. +++|++.||++++++++.+. ++. .. ..+.++++++ |+||.|+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~~~~~~l~~~--g~~-----~~----~s~~e~~~~a~~~DvVi~~v 89 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNVNAVQALERE--GIA-----GA----RSIEEFCAKLVKPRVVWLMV 89 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTT--TCB-----CC----SSHHHHHHHSCSSCEEEECS
T ss_pred CCEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHC--CCE-----Ee----CCHHHHHhcCCCCCEEEEeC
Confidence 48999999999999999999987 47999999999999988754 332 11 2355566666 9999999
Q ss_pred CCcccHHHHHHH---HHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 642 PYNLHHHVAEFC---IQHGKNLVTASYLS-PEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 642 P~~~h~~Vakac---IeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
|......+++.. ++.|..++|.+-.. ...+++.+.+++.|+.++. +++.-|
T Consensus 90 p~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vd-apVsGg 144 (358)
T 4e21_A 90 PAAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVD-VGTSGG 144 (358)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEE-EEEECG
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEe-CCCCCC
Confidence 987334455443 34678899997654 4567788888899998774 444333
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=3.4e-05 Score=87.02 Aligned_cols=79 Identities=15% Similarity=0.226 Sum_probs=67.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHc--CCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEF--GRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~--~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.++|+|+|.| +|++|+.+++.|++. +..+|++.+|+..+.+.+...+ +++..+..|+.| .+.+.++++++|+||
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~l~~~~~~~D~Vi 96 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD--LERLNYALEGVDICI 96 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC--HHHHHHHTTTCSEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC--HHHHHHHHhcCCEEE
Confidence 3468999999 799999999999987 4348999999998887776654 368889999998 889999999999999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 97 h~Aa~ 101 (344)
T 2gn4_A 97 HAAAL 101 (344)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99864
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=97.98 E-value=1.5e-05 Score=86.20 Aligned_cols=94 Identities=14% Similarity=0.132 Sum_probs=72.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|+|+|.| +|++|+.+++.|.+. ++++|++.+|+.++++.+.. ++++.+..|+.| .+.+.++++++|+||++...
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~d--~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD--QGVEVRHGDYNQ--PESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH--TTCEEEECCTTC--HHHHHHHTTTCSEEEECCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh--cCCeEEEeccCC--HHHHHHHHhcCCEEEEcCCC
Confidence 5799999 599999999999986 46889999999887766543 368889999998 88999999999999999864
Q ss_pred ccc--------HHHHHHHHHcCC-eEEEc
Q psy12817 644 NLH--------HHVAEFCIQHGK-NLVTA 663 (1201)
Q Consensus 644 ~~h--------~~VakacIeaGk-h~VD~ 663 (1201)
... ..++++|.++|+ ++|-+
T Consensus 77 ~~~~~~n~~~~~~l~~a~~~~~~~~~v~~ 105 (287)
T 2jl1_A 77 HYDNTLLIVQHANVVKAARDAGVKHIAYT 105 (287)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcCchHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 221 234555555554 44444
|
| >2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.3e-06 Score=101.09 Aligned_cols=105 Identities=22% Similarity=0.353 Sum_probs=81.8
Q ss_pred hhhcccccccccCcceeecccccccccchhhhccchhhhhhcCCCCCccccCCCcccchhhhHHHHhhhcccccccCCCC
Q psy12817 917 RLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMP 996 (1201)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1201)
.+++||-+.+++|.||.+||+|||.+|+.++++.||++.+..|+. +|..+.| |+|.....|++++. +.+...+
T Consensus 138 t~ia~E~v~~~~g~rL~sf~~iAG~~av~~a~~~lg~~~~g~~g~-~l~~~~p---m~s~~al~q~~~~~---l~~~~~~ 210 (394)
T 2qrj_A 138 TLYDLEFLENDQGRRVAAFGFYAGFAGAALGVRDWAFKQTHSDDE-DLPAVSP---YPNEKALVKDVTKD---YKEALAT 210 (394)
T ss_dssp EEEEGGGCBCTTSCBSCCCHHHHHHHHHHHHHHHHHHHHHSCTTC-CCCCCCC---CSSHHHHHHHHHHH---HHHHHTT
T ss_pred eEEEeeccCcCCCCEEeehhhHhHHHHHHHHHHHHHHhhcCCccc-cCCCccC---ccCHHHHHHHHHHH---Hhhhhcc
Confidence 378999999999999999999999999999999999999988776 5544444 65543336777665 4322222
Q ss_pred CCCCCceeeecCCCccccchhhhhhcCchhHH
Q psy12817 997 KSIGPLTIVFTGSGNVSQGAQEIFQELPYEEL 1028 (1201)
Q Consensus 997 ~~~~~~~~~~~~~g~~~~~~~e~~~~~~~~~~ 1028 (1201)
+.-.+-+++++|+|+++.+|.+++..|+..++
T Consensus 211 g~~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~ 242 (394)
T 2qrj_A 211 GARKPTVLIIGALGRCGSGAIDLLHKVGIPDA 242 (394)
T ss_dssp TCCCCCEEEETTTSHHHHHHHHHHHHTTCCGG
T ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHhCCCCcC
Confidence 33347788998899999999999999998643
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.4e-05 Score=86.67 Aligned_cols=79 Identities=19% Similarity=0.249 Sum_probs=61.4
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.++||+|||+|.||+.++..|.+. +++ |+++||+.++++++.+.+ ++.. .. ++.++++++|+||.|+|
T Consensus 9 ~~m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~~~~~~~~~~~~-g~~~----~~-----~~~~~~~~~Dvvi~av~ 77 (266)
T 3d1l_A 9 EDTPIVLIGAGNLATNLAKALYRK-GFRIVQVYSRTEESARELAQKV-EAEY----TT-----DLAEVNPYAKLYIVSLK 77 (266)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSHHHHHHHHHHT-TCEE----ES-----CGGGSCSCCSEEEECCC
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHc-CCce----eC-----CHHHHhcCCCEEEEecC
Confidence 357999999999999999999876 466 899999999999988765 3432 11 24556779999999999
Q ss_pred CcccHHHHHHH
Q psy12817 643 YNLHHHVAEFC 653 (1201)
Q Consensus 643 ~~~h~~Vakac 653 (1201)
...+.++++..
T Consensus 78 ~~~~~~v~~~l 88 (266)
T 3d1l_A 78 DSAFAELLQGI 88 (266)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77655555543
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.97 E-value=2.8e-05 Score=86.46 Aligned_cols=112 Identities=13% Similarity=0.205 Sum_probs=82.2
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||+|.+|+.+++.|...+ .+|+++||+.++++.+.+ + ++..+ + .+.+.++++++|+||+++|
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d~~~~~~~~~~~-~-g~~~~--~-----~~~l~~~l~~aDvVi~~~p 224 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALG-ANVKVGARSSAHLARITE-M-GLVPF--H-----TDELKEHVKDIDICINTIP 224 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHH-T-TCEEE--E-----GGGHHHHSTTCSEEEECCS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHH-C-CCeEE--c-----hhhHHHHhhCCCEEEECCC
Confidence 45689999999999999999998764 699999999988776544 3 34322 1 2457888899999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEe
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~ 686 (1201)
..+-..-.-.+++.|..++|+++...... + +.+++.|+.++.
T Consensus 225 ~~~i~~~~~~~mk~g~~lin~a~g~~~~~-~-~~a~~~G~~~i~ 266 (300)
T 2rir_A 225 SMILNQTVLSSMTPKTLILDLASRPGGTD-F-KYAEKQGIKALL 266 (300)
T ss_dssp SCCBCHHHHTTSCTTCEEEECSSTTCSBC-H-HHHHHHTCEEEE
T ss_pred hhhhCHHHHHhCCCCCEEEEEeCCCCCcC-H-HHHHHCCCEEEE
Confidence 75432223345678889999987432221 3 567888998763
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.96 E-value=9.6e-06 Score=87.53 Aligned_cols=89 Identities=12% Similarity=0.245 Sum_probs=68.5
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.|+||+|||+|.||+.++..|.+.+ .+|+++||++++++++++.+ ++. +.+ ++.++++++|+||.|+|.
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~g-~~v~~~~~~~~~~~~~~~~~-g~~-----~~~----~~~~~~~~~D~Vi~~v~~ 70 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQTP-HELIISGSSLERSKEIAEQL-ALP-----YAM----SHQDLIDQVDLVILGIKP 70 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTSS-CEEEEECSSHHHHHHHHHHH-TCC-----BCS----SHHHHHHTCSEEEECSCG
T ss_pred CccEEEEECCCHHHHHHHHHHHhCC-CeEEEECCCHHHHHHHHHHc-CCE-----eeC----CHHHHHhcCCEEEEEeCc
Confidence 4679999999999999999998764 68999999999999888765 332 122 355667799999999997
Q ss_pred cccHHHHHHHHHcCCeEEEcc
Q psy12817 644 NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~S 664 (1201)
..+.++++. ++.|+.+++.+
T Consensus 71 ~~~~~v~~~-l~~~~~vv~~~ 90 (259)
T 2ahr_A 71 QLFETVLKP-LHFKQPIISMA 90 (259)
T ss_dssp GGHHHHHTT-SCCCSCEEECC
T ss_pred HhHHHHHHH-hccCCEEEEeC
Confidence 777666654 34667777763
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=4.9e-05 Score=84.65 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=63.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH----HHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK----EDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~----ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
.++|+|+|.| +|++|+.+++.|.+. +++|++.+|+. +.++.+.... ++++.+..|+.| .+.+.++++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~ 99 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKL-NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD--LTTCEQVMK 99 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC--HHHHHHHTT
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC--HHHHHHHhc
Confidence 3578999999 699999999999987 47899999954 3444443321 578999999998 899999999
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
++|+||+|...
T Consensus 100 ~~d~Vih~A~~ 110 (351)
T 3ruf_A 100 GVDHVLHQAAL 110 (351)
T ss_dssp TCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 99999999864
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.95 E-value=3.2e-05 Score=81.67 Aligned_cols=75 Identities=19% Similarity=0.163 Sum_probs=62.3
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe-eEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV-EATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v-~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
..+.|+|+|.| +|++|+.+++.|++. +++|++.+|+.++++++... ++ +.+..|+++ .+.+.++++|+||+
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~~~~~~~~~--~~~~~~~~Dl~~----~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNK-GHEPVAMVRNEEQGPELRER--GASDIVVANLEE----DFSHAFASIDAVVF 90 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHT--TCSEEEECCTTS----CCGGGGTTCSEEEE
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhC-CCeEEEEECChHHHHHHHhC--CCceEEEcccHH----HHHHHHcCCCEEEE
Confidence 35578999999 599999999999987 57999999999998877653 68 889999873 57778889999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 91 ~ag~ 94 (236)
T 3e8x_A 91 AAGS 94 (236)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9864
|
| >1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=7.4e-06 Score=89.82 Aligned_cols=115 Identities=14% Similarity=0.098 Sum_probs=85.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.+||+++|+|.||+.+++. . ++++ .+.+ +++.++ ++.+ . ++++++++++|+||.|.+.
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~---~k~gel-----gv~a-----~----~d~d~lla~pD~VVe~A~~ 70 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---G-NFEKIYAYD---RISKDI-----PGVV-----R----LDEFQVPSDVSTVVECASP 70 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---S-CCSEEEEEC---SSCCCC-----SSSE-----E----CSSCCCCTTCCEEEECSCH
T ss_pred cceEEEECcCHHHHHHHhc---C-CcEEEEEEe---cccccc-----Ccee-----e----CCHHHHhhCCCEEEECCCH
Confidence 5899999999999999998 3 6775 4444 333221 2221 1 2345566789999999975
Q ss_pred cccHHHHHHHHHcCCeEEEccC---ChHH-HHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 644 NLHHHVAEFCIQHGKNLVTASY---LSPE-MMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~Sy---vs~e-~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
..-.+.+..++++|++++..|. ..++ ...|.+.|++.|.++..-.|..||+|-+-+.
T Consensus 71 ~av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSGAi~GlD~l~aa 131 (253)
T 1j5p_A 71 EAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSGAIGGLDVLSSI 131 (253)
T ss_dssp HHHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCCcccchhHHHHh
Confidence 5445668899999999999983 2344 4678889999999998889999998886433
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.93 E-value=2.8e-05 Score=86.19 Aligned_cols=109 Identities=14% Similarity=0.180 Sum_probs=81.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
++||.|||+|.||..++..|++. +++|++.||++++++++.+. ++.. . .++.++++ +|+||.|+|..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~~~~~--g~~~-----~----~~~~~~~~-aDvvi~~vp~~ 81 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIEAMTPLAEA--GATL-----A----DSVADVAA-ADLIHITVLDD 81 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTTTSHHHHHT--TCEE-----C----SSHHHHTT-SSEEEECCSSH
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHC--CCEE-----c----CCHHHHHh-CCEEEEECCCh
Confidence 46999999999999999999986 57899999999998887763 3432 2 24677778 99999999965
Q ss_pred cc-HHHHHHH---HHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 645 LH-HHVAEFC---IQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h-~~Vakac---IeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.+ ..+++.. ++.|+.++|.|-+.+ ..+++.+..++.|+.++.
T Consensus 82 ~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 128 (296)
T 3qha_A 82 AQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVD 128 (296)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 33 3344333 356778899876554 445677777777887664
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.9e-05 Score=87.31 Aligned_cols=74 Identities=14% Similarity=0.144 Sum_probs=61.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.+|+|+|.| +|++|+.+++.|++. +++|++.+|+.++++.+.. ++++.+..|+.| .+.+.++++++|+||++..
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~--~~~~~~~~Dl~d--~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAA-GHDLVLIHRPSSQIQRLAY--LEPECRVAEMLD--HAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECTTSCGGGGGG--GCCEEEECCTTC--HHHHHHHTTTCSEEEEC--
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEecChHhhhhhcc--CCeEEEEecCCC--HHHHHHHHcCCCEEEECCc
Confidence 456999999 699999999999987 5799999998876654432 268889999998 8899999999999999985
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.91 E-value=3.3e-05 Score=84.11 Aligned_cols=99 Identities=17% Similarity=0.280 Sum_probs=75.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHHc----CCeeEEEee-
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNEF----GRVEATLID- 618 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~~----~~v~~v~lD- 618 (1201)
.+.++|+|+|+|.+|..++++|++.+--+|+++|++. .+++.+++.+ |.+.....+
T Consensus 29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 4468999999999999999999987655899999997 6777665543 444433322
Q ss_pred -cCCCCchHHHhhccCCcEEEEcCCCcc-cHHHHHHHHHcCCeEEEcc
Q psy12817 619 -VNNGGSDNLSGLVRSADLVVSLLPYNL-HHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 619 -V~D~~~e~L~elI~~~DVVIs~lP~~~-h~~VakacIeaGkh~VD~S 664 (1201)
+. .+.+.++++++|+||+|++..- ...+.+.|.+.|+.+++.+
T Consensus 109 ~~~---~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 109 LLD---DAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp CCC---HHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEE
T ss_pred cCC---HhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEee
Confidence 32 3567788899999999997532 3557788888899888864
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.90 E-value=3.5e-05 Score=83.23 Aligned_cols=92 Identities=20% Similarity=0.176 Sum_probs=65.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHH--------------HHHHHHHcCCeeEEEeecCCCCchHH
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKED--------------IDKVTNEFGRVEATLIDVNNGGSDNL 627 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ek--------------Ae~La~~~~~v~~v~lDV~D~~~e~L 627 (1201)
+..++||+|||+|.||.+++..|++. +++|++.+|++++ +++++..++... ..+.
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 84 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH----------LAAF 84 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE----------EEEH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee----------ccCH
Confidence 35579999999999999999999986 5789999999997 566665543322 1234
Q ss_pred HhhccCCcEEEEcCCCcccHHHHHHH---HHcCCeEEEcc
Q psy12817 628 SGLVRSADLVVSLLPYNLHHHVAEFC---IQHGKNLVTAS 664 (1201)
Q Consensus 628 ~elI~~~DVVIs~lP~~~h~~Vakac---IeaGkh~VD~S 664 (1201)
.++++++|+||.|+|......+++.. ...++.++|++
T Consensus 85 ~e~~~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s 124 (245)
T 3dtt_A 85 ADVAAGAELVVNATEGASSIAALTAAGAENLAGKILVDIA 124 (245)
T ss_dssp HHHHHHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECC
T ss_pred HHHHhcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECC
Confidence 56677899999999987655544321 11566666665
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=5.1e-05 Score=89.18 Aligned_cols=126 Identities=13% Similarity=0.192 Sum_probs=84.7
Q ss_pred cccccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe-----e------EEEeecCCCCch
Q psy12817 557 KADIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV-----E------ATLIDVNNGGSD 625 (1201)
Q Consensus 557 ~~~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v-----~------~v~lDV~D~~~e 625 (1201)
+.......++||.|||+|+||.+++..|++ +++|++.|+++++++++.+....+ . ...+.++ .
T Consensus 28 ~~~~r~~~~mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~t----t 101 (432)
T 3pid_A 28 QQMGRGSEFMKITISGTGYVGLSNGVLIAQ--NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRAT----T 101 (432)
T ss_dssp -------CCCEEEEECCSHHHHHHHHHHHT--TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEE----S
T ss_pred cccccccCCCEEEEECcCHHHHHHHHHHHc--CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEE----c
Confidence 333345567899999999999999999886 689999999999999887632100 0 0001122 2
Q ss_pred HHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHH
Q psy12817 626 NLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLA 699 (1201)
Q Consensus 626 ~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA 699 (1201)
++.+.++++|+||.|+|..... ..+..|++++....+.+.+ -+.|..++......||...-++
T Consensus 102 d~~ea~~~aDvViiaVPt~~~~---------~~~~~Dl~~V~~v~~~i~~--l~~g~iVV~~STv~pgtt~~l~ 164 (432)
T 3pid_A 102 DKHDAYRNADYVIIATPTDYDP---------KTNYFNTSTVEAVIRDVTE--INPNAVMIIKSTIPVGFTRDIK 164 (432)
T ss_dssp CHHHHHTTCSEEEECCCCEEET---------TTTEEECHHHHHHHHHHHH--HCTTSEEEECSCCCTTHHHHHH
T ss_pred CHHHHHhCCCEEEEeCCCcccc---------ccccccHHHHHHHHHHHHh--cCCCcEEEEeCCCChHHHHHHH
Confidence 4667788999999999976531 1246777776665666644 3567788888899999765443
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=2.3e-05 Score=84.41 Aligned_cols=93 Identities=12% Similarity=0.151 Sum_probs=70.4
Q ss_pred eEEEEc-CchhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
+|+|.| +|++|+.+++.|.+. ++++|++.+|+.++++.+.. +++..+..|+.| .+.+.++++++|+||++....
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~d--~~~~~~~~~~~d~vi~~a~~~ 76 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA--QGITVRQADYGD--EAALTSALQGVEKLLLISSSE 76 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH--TTCEEEECCTTC--HHHHHHHTTTCSEEEECC---
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc--CCCeEEEcCCCC--HHHHHHHHhCCCEEEEeCCCC
Confidence 589999 599999999999986 46889999999887766543 368889999998 889999999999999998532
Q ss_pred ------ccHHHHHHHHHcCC-eEEEc
Q psy12817 645 ------LHHHVAEFCIQHGK-NLVTA 663 (1201)
Q Consensus 645 ------~h~~VakacIeaGk-h~VD~ 663 (1201)
....++++|.++|+ ++|-+
T Consensus 77 ~~~~~~~~~~l~~a~~~~~~~~~v~~ 102 (286)
T 2zcu_A 77 VGQRAPQHRNVINAAKAAGVKFIAYT 102 (286)
T ss_dssp -----CHHHHHHHHHHHHTCCEEEEE
T ss_pred chHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 12345555555553 44443
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.1e-05 Score=88.38 Aligned_cols=110 Identities=17% Similarity=0.241 Sum_probs=80.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.|+||+|||+|.||+.++..|.+. +++|++.+ +.++++++.+. ++. +. ..+.++++++|+||.|+|.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~-~~~~~~~~~~~--g~~-----~~----~~~~~~~~~~D~vi~~vp~ 68 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARA-GHQLHVTT-IGPVADELLSL--GAV-----NV----ETARQVTEFADIIFIMVPD 68 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHT-TCEEEECC-SSCCCHHHHTT--TCB-----CC----SSHHHHHHTCSEEEECCSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC-CCEEEEEc-CHHHHHHHHHc--CCc-----cc----CCHHHHHhcCCEEEEECCC
Confidence 357999999999999999999886 57899999 88888877653 322 12 2456667899999999997
Q ss_pred ccc-HHHHH------HHHHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEe
Q psy12817 644 NLH-HHVAE------FCIQHGKNLVTASYLS-PEMMALHERAASAGITVLN 686 (1201)
Q Consensus 644 ~~h-~~Vak------acIeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~ 686 (1201)
..+ ..++. .+++.|+++++.+-.. ...+++.+.+++.|+.+++
T Consensus 69 ~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~ 119 (295)
T 1yb4_A 69 TPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLD 119 (295)
T ss_dssp HHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEE
T ss_pred HHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 765 33443 2345688899987654 3466777777777877764
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=4e-05 Score=85.65 Aligned_cols=90 Identities=11% Similarity=0.060 Sum_probs=70.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH----HHHHHHHHH-cCCeeEEEeecCCCCchHHHhhcc--CCcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK----EDIDKVTNE-FGRVEATLIDVNNGGSDNLSGLVR--SADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~----ekAe~La~~-~~~v~~v~lDV~D~~~e~L~elI~--~~DV 636 (1201)
+++|+|+| +|++|+.+++.|++.+ ++|++.+|+. ++++.+... -++++.+..|+.| .+.+.++++ ++|+
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d--~~~l~~~~~~~~~d~ 86 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE--QEAMEKILKEHEIDI 86 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC--HHHHHHHHHHTTCCE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC--HHHHHHHHhhCCCCE
Confidence 57999999 5999999999999875 7899999976 555433321 1478999999998 899999999 9999
Q ss_pred EEEcCCCc---ccHHHHHHHHHcC
Q psy12817 637 VVSLLPYN---LHHHVAEFCIQHG 657 (1201)
Q Consensus 637 VIs~lP~~---~h~~VakacIeaG 657 (1201)
||++++.. ....++++|.++|
T Consensus 87 Vi~~a~~~n~~~~~~l~~aa~~~g 110 (346)
T 3i6i_A 87 VVSTVGGESILDQIALVKAMKAVG 110 (346)
T ss_dssp EEECCCGGGGGGHHHHHHHHHHHC
T ss_pred EEECCchhhHHHHHHHHHHHHHcC
Confidence 99999752 2355666666666
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.88 E-value=5.4e-05 Score=75.43 Aligned_cols=112 Identities=16% Similarity=0.143 Sum_probs=80.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHcC-CeeEEEeecCCCCchHHHhh-ccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGL-VRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~l 641 (1201)
.++|+|+|+|.+|+.+++.|.+. +++|++++++ .++++.+...++ ++..+..|.+| .+.+.++ ++++|+||.++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~--~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSND--SSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTS--HHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCC--HHHHHHcChhhCCEEEEec
Confidence 46899999999999999999886 5789999997 577777665443 57888899988 7888876 89999999999
Q ss_pred CCc-ccHHHHHHHHHc-C-CeEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 642 PYN-LHHHVAEFCIQH-G-KNLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 642 P~~-~h~~VakacIea-G-kh~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
+.. .+..++..|-+. + .+++........... .++.|+.
T Consensus 80 ~~d~~n~~~~~~a~~~~~~~~ii~~~~~~~~~~~----l~~~G~~ 120 (153)
T 1id1_A 80 DNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNK----IKMVHPD 120 (153)
T ss_dssp SCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHH----HHTTCCS
T ss_pred CChHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH----HHHcCCC
Confidence 864 344455555554 3 344443332222222 3567775
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=97.88 E-value=5.2e-05 Score=81.98 Aligned_cols=71 Identities=15% Similarity=0.180 Sum_probs=60.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+||||+|.|+|++|+.+++.|.+. +++|++.+|+.++++.+.. ++++.+..|+.| .+ ++++|+||+|.+.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~d--~~-----~~~~d~vi~~a~~ 73 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ-GWRIIGTSRNPDQMEAIRA--SGAEPLLWPGEE--PS-----LDGVTHLLISTAP 73 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG-TCEEEEEESCGGGHHHHHH--TTEEEEESSSSC--CC-----CTTCCEEEECCCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC-CCEEEEEEcChhhhhhHhh--CCCeEEEecccc--cc-----cCCCCEEEECCCc
Confidence 578999999999999999999987 5799999999988877654 378999999987 43 6799999999864
Q ss_pred c
Q psy12817 644 N 644 (1201)
Q Consensus 644 ~ 644 (1201)
.
T Consensus 74 ~ 74 (286)
T 3ius_A 74 D 74 (286)
T ss_dssp B
T ss_pred c
Confidence 3
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=7.2e-05 Score=88.95 Aligned_cols=122 Identities=10% Similarity=0.199 Sum_probs=87.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhccC---CcEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVRS---ADLV 637 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~~---~DVV 637 (1201)
.++++|+|||+|.||.+++..|++. +++|++.+|++++++++.+..+ ++.. .+ ++.+++++ +|+|
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~~~~~~l~~~~~~~gi~~-----~~----s~~e~v~~l~~aDvV 82 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSREKTEEVIAENPGKKLVP-----YY----TVKEFVESLETPRRI 82 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSHHHHHHHHHHSTTSCEEE-----CS----SHHHHHHTBCSSCEE
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhCCCCCeEE-----eC----CHHHHHhCCCCCCEE
Confidence 3468899999999999999999986 5789999999999999887653 3321 12 34455555 9999
Q ss_pred EEcCCCcc-cHHHHHHH---HHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEeccccCchhH
Q psy12817 638 VSLLPYNL-HHHVAEFC---IQHGKNLVTASYLS-PEMMALHERAASAGITVLNEVGLDPGID 695 (1201)
Q Consensus 638 Is~lP~~~-h~~Vakac---IeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~e~GlDPGId 695 (1201)
|.|+|... -..+++.. ++.|..+||.+-.. .....+.+..++.|+.++ ++++..|..
T Consensus 83 il~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v-~~pv~gg~~ 144 (480)
T 2zyd_A 83 LLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFI-GTGVSGGEE 144 (480)
T ss_dssp EECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE-EEEEESHHH
T ss_pred EEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCee-CCccccCHh
Confidence 99999743 34555433 34578899987543 455667777778898887 456655543
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=2.8e-05 Score=86.33 Aligned_cols=77 Identities=21% Similarity=0.386 Sum_probs=60.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCC-CCeEEEEeCCHH--HHHHHHHH-cCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDE-NIHITLGSLLKE--DIDKVTNE-FGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~-~~~VtVadR~~e--kAe~La~~-~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
||+|+|.| +|++|+.+++.|++.+ +++|++.+|+.. ..+.+... -+++..+..|+.| .+.+.++++++|+||+
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d~vih 81 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD--AELVDKLAAKADAIVH 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTC--HHHHHHHHTTCSEEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCC--HHHHHHHhhcCCEEEE
Confidence 78999999 7999999999998864 689999998642 11111111 1468889999998 8899999999999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
|...
T Consensus 82 ~A~~ 85 (348)
T 1oc2_A 82 YAAE 85 (348)
T ss_dssp CCSC
T ss_pred CCcc
Confidence 9854
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.87 E-value=7.6e-05 Score=83.72 Aligned_cols=93 Identities=18% Similarity=0.282 Sum_probs=67.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeE--------EEee-cCCCCchHHHhhccCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEA--------TLID-VNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~--------v~lD-V~D~~~e~L~elI~~~D 635 (1201)
++||+|||+|.+|..++..|.+. +++|++.+|++++++++.+.. +... ..++ +. .++.++++++|
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D 77 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK-GQSVLAWDIDAQRIKEIQDRG-AIIAEGPGLAGTAHPDLLT----SDIGLAVKDAD 77 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHT-SEEEESSSCCEEECCSEEE----SCHHHHHTTCS
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHhcC-CeEEeccccccccccceec----CCHHHHHhcCC
Confidence 47999999999999999999886 478999999999998887653 2211 0010 11 24556678999
Q ss_pred EEEEcCCCcccHHHHHHH---HHcCCeEEEc
Q psy12817 636 LVVSLLPYNLHHHVAEFC---IQHGKNLVTA 663 (1201)
Q Consensus 636 VVIs~lP~~~h~~Vakac---IeaGkh~VD~ 663 (1201)
+||.|+|...+..+++.. ++.++.+++.
T Consensus 78 ~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 78 VILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred EEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 999999988777666544 2345555555
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=3.9e-05 Score=84.13 Aligned_cols=116 Identities=14% Similarity=0.300 Sum_probs=80.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
|||+|||+|.||..++..|.+. +++|++.||+.++++++.+. ++.. .+ ++.++++++|+||.|+|...
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~~--g~~~-----~~----~~~~~~~~~Dvvi~~vp~~~ 68 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFPDACKEFQDA--GEQV-----VS----SPADVAEKADRIITMLPTSI 68 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT-TCCEEEECSSTHHHHHHHTT--TCEE-----CS----SHHHHHHHCSEEEECCSSHH
T ss_pred CeEEEEeccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--CCee-----cC----CHHHHHhcCCEEEEeCCCHH
Confidence 4799999999999999999886 46899999999998887753 3332 22 34566678999999998654
Q ss_pred c-HHHHHH------HHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEeccccCchh
Q psy12817 646 H-HHVAEF------CIQHGKNLVTASYLSP-EMMALHERAASAGITVLNEVGLDPGI 694 (1201)
Q Consensus 646 h-~~Vaka------cIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~e~GlDPGI 694 (1201)
+ ..++.. +++.|+.+++.+-+++ ..+++.+.+++.|+.+++ ..+.+|.
T Consensus 69 ~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~-~p~~~g~ 124 (296)
T 2gf2_A 69 NAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMD-APVSGGV 124 (296)
T ss_dssp HHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEESHH
T ss_pred HHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE-cCCCCCh
Confidence 4 333332 2356778888765544 356666666667776654 3344443
|
| >3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00012 Score=83.81 Aligned_cols=120 Identities=16% Similarity=0.213 Sum_probs=90.8
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEE-E-EeCCHHHHHHHHHHcCCeeEEE-eecCCC---------CchHHHhhc-
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHIT-L-GSLLKEDIDKVTNEFGRVEATL-IDVNNG---------GSDNLSGLV- 631 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~Vt-V-adR~~ekAe~La~~~~~v~~v~-lDV~D~---------~~e~L~elI- 631 (1201)
+||.||| +|.||..+++.+.+.+.++|+ + ++++.+.+.+.+.+| +.+.+. .|-.+- -.+.+.+++
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n~~~l~~q~~~f-~p~~v~v~~~~~~~~~l~~~~~G~~~l~el~~ 82 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNLELAFKIVKEF-NVKNVAITGDVEFEDSSINVWKGSHSIEEMLE 82 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSCHHHHHHHHHHH-TCCEEEECSSCCCCCSSSEEEESTTHHHHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCCHHHHHHHHHHc-CCCEEEEccHHHHHHHHHHHccCHHHHHHHhc
Confidence 7999999 699999999999887667754 3 789999999998888 334332 222210 013445665
Q ss_pred -cCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC--ChHHHHHHHHHHHHcCCEEEe
Q psy12817 632 -RSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY--LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 632 -~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy--vs~e~~eLde~AkeAGVtil~ 686 (1201)
.++|+|+++++...|..-..+|+++|+|+..+.= ....-..+.+.|+++|+.+++
T Consensus 83 ~~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANKEsLV~aG~li~~~a~~~g~~llP 140 (376)
T 3a06_A 83 ALKPDITMVAVSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKGTELIP 140 (376)
T ss_dssp HHCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCSHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeChHHHHhhHHHHHHHHHHcCCEEEE
Confidence 3799999999999999999999999999999632 223445667789999999987
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.84 E-value=7.7e-05 Score=83.81 Aligned_cols=110 Identities=13% Similarity=0.085 Sum_probs=77.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------HHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.++||.|||+|.||.+++..|++.+.++|++.||++ +.++++.+ . ++ .. ..+.++++++|+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~-~-g~------~~----~s~~e~~~~aDv 90 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAE-L-GV------EP----LDDVAGIACADV 90 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHH-T-TC------EE----ESSGGGGGGCSE
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHH-C-CC------CC----CCHHHHHhcCCE
Confidence 458999999999999999999987427999999997 33443332 1 33 11 023456778999
Q ss_pred EEEcCCCcccHHHHHHH---HHcCCeEEEccCChH-HHHHHHHHHHHcCCEEE
Q psy12817 637 VVSLLPYNLHHHVAEFC---IQHGKNLVTASYLSP-EMMALHERAASAGITVL 685 (1201)
Q Consensus 637 VIs~lP~~~h~~Vakac---IeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil 685 (1201)
||.|+|.......++.. ++.++-+||.|-+.+ ..+++.+..++.|+.++
T Consensus 91 Vi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~ 143 (317)
T 4ezb_A 91 VLSLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFV 143 (317)
T ss_dssp EEECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEE
T ss_pred EEEecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 99999987766655443 345677888876544 35566666777777665
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=3.1e-05 Score=86.03 Aligned_cols=79 Identities=16% Similarity=0.115 Sum_probs=62.9
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEE
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVV 638 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVI 638 (1201)
..+.|+|+|.| +|++|+.+++.|++. +++|++.+|+.....++...++++..+..|+.| .+.+.++++ ++|+||
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d--~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQ-GHEILVIDNFATGKREVLPPVAGLSVIEGSVTD--AGLLERAFDSFKPTHVV 93 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGG-TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTC--HHHHHHHHHHHCCSEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCccchhhhhccCCceEEEeeCCC--HHHHHHHHhhcCCCEEE
Confidence 34568999999 599999999999987 478999999654332222233578889999998 888999998 999999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 94 h~A~~ 98 (330)
T 2pzm_A 94 HSAAA 98 (330)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99854
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=97.84 E-value=3.2e-05 Score=85.41 Aligned_cols=76 Identities=22% Similarity=0.319 Sum_probs=61.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|+|+|.| +|++|+.+++.|.+.++++|++.+|+.++++.+.. .++++.+..|+.| ..+.+.++++++|+||+|...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~-~~~~~~~~~~~~d~vih~A~~ 77 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN-HPHFHFVEGDISI-HSEWIEYHVKKCDVVLPLVAI 77 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT-CTTEEEEECCTTT-CSHHHHHHHHHCSEEEECBCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc-CCCeEEEeccccC-cHHHHHhhccCCCEEEEcccc
Confidence 5899999 69999999999998767899999998876654332 2468889999987 235688888899999999753
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.83 E-value=2.5e-05 Score=86.93 Aligned_cols=78 Identities=12% Similarity=0.122 Sum_probs=60.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVS 639 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs 639 (1201)
.+||+|+|.| +|++|+.+++.|++. +.+|++.+|+.....+....++++..+..|+.| .+.+.+++++ +|+||+
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~D~vih 95 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLER-GDKVVGIDNFATGRREHLKDHPNLTFVEGSIAD--HALVNQLIGDLQPDAVVH 95 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGSCCCTTEEEEECCTTC--HHHHHHHHHHHCCSEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCCccchhhHhhcCCceEEEEeCCC--HHHHHHHHhccCCcEEEE
Confidence 4578999999 799999999999987 478999999754321111112468889999998 8889999987 999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 96 ~A~~ 99 (333)
T 2q1w_A 96 TAAS 99 (333)
T ss_dssp CCCC
T ss_pred Ccee
Confidence 9854
|
| >1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.83 E-value=2.8e-05 Score=88.58 Aligned_cols=97 Identities=11% Similarity=0.213 Sum_probs=72.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEE-------------eecCCCCchHHHhh
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATL-------------IDVNNGGSDNLSGL 630 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~-------------lDV~D~~~e~L~el 630 (1201)
|+||+|+|+|++|+.+++.|.+++++++ .+.+++++...+++... +..... +.+. ....++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~-g~~~~~~~~~~v~~~~~~~l~v~----~~~~~~ 75 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKK-GYDLYVAIPERVKLFEKAGIEVA----GTVDDM 75 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHT-TCCEEESSGGGHHHHHHTTCCCC----EEHHHH
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCc-chhhccccccceeeecCCceEEc----CCHHHH
Confidence 5799999999999999999998888885 56788766665555432 101000 0011 134455
Q ss_pred ccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCC
Q psy12817 631 VRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYL 666 (1201)
Q Consensus 631 I~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syv 666 (1201)
+.++|+|+.|+|...|.+.+..++++|++++|.+..
T Consensus 76 ~~~vDvV~~atp~~~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 76 LDEADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp HHTCSEEEECCSTTHHHHHHHHHHHHTCCEEECTTS
T ss_pred hcCCCEEEECCCchhhHHHHHHHHHcCCEEEEecCC
Confidence 578999999999999999999999999999999764
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.83 E-value=2.2e-05 Score=85.66 Aligned_cols=112 Identities=16% Similarity=0.201 Sum_probs=78.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|+||+|+|+|+||+.+++.+.++++ +++ ++|++.+. .. ++. +.+ ++++++ ++|+||+++++
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~~~------~~-gv~-----v~~----dl~~l~-~~DVvIDft~p 64 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTPKA------TT-PYQ-----QYQ----HIADVK-GADVAIDFSNP 64 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSCC--------C-CSC-----BCS----CTTTCT-TCSEEEECSCH
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCccc------cC-CCc-----eeC----CHHHHh-CCCEEEEeCCh
Confidence 7899999999999999999998888 754 57887652 11 222 222 355566 89999998854
Q ss_pred cccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHH
Q psy12817 644 NLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLL 698 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhml 698 (1201)
......++ +++|+++|..+ +..++..+|.+.|++ +.++..--|.-|+.=++
T Consensus 65 ~a~~~~~~--l~~g~~vVigTTG~s~e~~~~l~~aa~~--~~v~~a~N~S~Gv~l~~ 117 (243)
T 3qy9_A 65 NLLFPLLD--EDFHLPLVVATTGEKEKLLNKLDELSQN--MPVFFSANMSYGVHALT 117 (243)
T ss_dssp HHHHHHHT--SCCCCCEEECCCSSHHHHHHHHHHHTTT--SEEEECSSCCHHHHHHH
T ss_pred HHHHHHHH--HhcCCceEeCCCCCCHHHHHHHHHHHhc--CCEEEECCccHHHHHHH
Confidence 44344455 89999999865 334456678777776 55566667777875544
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=2.2e-05 Score=88.95 Aligned_cols=80 Identities=20% Similarity=0.237 Sum_probs=63.3
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..+||+|+|.| +|++|+.+++.|++.+..+|++.+|+.+...+.....++++.+..|+.| .+.+.++++++|+||++
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d--~~~l~~~~~~~d~Vih~ 106 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITD--DALLASLQDEYDYVFHL 106 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTC--HHHHHHCCSCCSEEEEC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCC--HHHHHHHhhCCCEEEEC
Confidence 35678999999 6999999999999874389999999865432111112468888999998 88999999999999999
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 107 A~~ 109 (377)
T 2q1s_A 107 ATY 109 (377)
T ss_dssp CCC
T ss_pred CCc
Confidence 864
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.82 E-value=3.7e-05 Score=85.48 Aligned_cols=110 Identities=17% Similarity=0.206 Sum_probs=78.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
++||+|||+|.||..++..|.+. +++|++.+|+.++++++.+. ++.. .+ .+.++++++|+||.|+|..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~~--g~~~-----~~----~~~~~~~~~DvVi~av~~~ 97 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTAEKCDLFIQE--GARL-----GR----TPAEVVSTCDITFACVSDP 97 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSGGGGHHHHHT--TCEE-----CS----CHHHHHHHCSEEEECCSSH
T ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHc--CCEE-----cC----CHHHHHhcCCEEEEeCCCH
Confidence 47899999999999999999886 46899999999988887652 3321 22 2455667899999999954
Q ss_pred cc-HHHHH------HHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 645 LH-HHVAE------FCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h-~~Vak------acIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
.+ ..++. ..+..++.+++.+-..+ ..+++.+.+.+.|+.++.
T Consensus 98 ~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~ 147 (316)
T 2uyy_A 98 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLE 147 (316)
T ss_dssp HHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 33 33333 23456788898876544 356676666667776653
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00011 Score=82.04 Aligned_cols=78 Identities=18% Similarity=0.259 Sum_probs=63.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH----HHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK----EDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~----ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
.+||+|+|.| +|++|+.+++.|++. +.+|++.+|+. ++++.+.+.+ +++..+..|+.| .+.+.++++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~ 101 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKL-DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN--LDDCNNACA 101 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTS--HHHHHHHHT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCC--HHHHHHHhc
Confidence 4578999999 599999999999987 57899999864 3444444322 478889999998 888999999
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
++|+||+|...
T Consensus 102 ~~d~vih~A~~ 112 (352)
T 1sb8_A 102 GVDYVLHQAAL 112 (352)
T ss_dssp TCSEEEECCSC
T ss_pred CCCEEEECCcc
Confidence 99999999864
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=97.78 E-value=9e-05 Score=81.24 Aligned_cols=92 Identities=12% Similarity=0.146 Sum_probs=66.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHcCCee-EEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEFGRVE-ATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~~~v~-~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|+||+|||+|.||..++..|.+.+ +.+|++.||+.++++.+.+ . ++. ... . ++.++++++|+||.|+|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~-~-g~~~~~~---~-----~~~~~~~~aDvVilavp 75 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE-R-GIVDEAT---A-----DFKVFAALADVIILAVP 75 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH-T-TSCSEEE---S-----CTTTTGGGCSEEEECSC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH-c-CCccccc---C-----CHHHhhcCCCEEEEcCC
Confidence 589999999999999999998764 5789999999998887654 2 221 111 1 23445678999999999
Q ss_pred CcccHHHHHHHHH----cCCeEEEccCC
Q psy12817 643 YNLHHHVAEFCIQ----HGKNLVTASYL 666 (1201)
Q Consensus 643 ~~~h~~VakacIe----aGkh~VD~Syv 666 (1201)
...+..+++.... .++-++|.+-+
T Consensus 76 ~~~~~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 76 IKKTIDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp HHHHHHHHHHHHTSCCCTTCEEECCCSC
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEECCCC
Confidence 8776667665433 35556665543
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.78 E-value=4.5e-05 Score=83.21 Aligned_cols=102 Identities=19% Similarity=0.224 Sum_probs=74.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHHc----CCeeEEEee
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNEF----GRVEATLID 618 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~~----~~v~~v~lD 618 (1201)
..+.++|+|+|+|.+|..++++|++.+--+++++|++. .|++.+++.+ |+++....+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 35578999999999999999999998766899997653 4665555433 555543332
Q ss_pred cCCCCchHHHhhccCCcEEEEcCCCcc-cHHHHHHHHHcCCeEEEcc
Q psy12817 619 VNNGGSDNLSGLVRSADLVVSLLPYNL-HHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 619 V~D~~~e~L~elI~~~DVVIs~lP~~~-h~~VakacIeaGkh~VD~S 664 (1201)
..= +.+.+.++++++|+||+|+.... ...+.+.|.+.++.+|+.+
T Consensus 105 ~~~-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 105 QRL-TGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITAS 150 (251)
T ss_dssp SCC-CHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccC-CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 210 14577888899999999997432 3567788889999888864
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=5.2e-05 Score=84.26 Aligned_cols=71 Identities=20% Similarity=0.235 Sum_probs=58.7
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..++|+|+|.| +|++|+.+++.|++. +++|++.+|+.+. +++..+..|+.| .+.+.++++++|+||++
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~--------~~~~~~~~Dl~d--~~~~~~~~~~~d~vih~ 84 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQ-GRTVRGFDLRPSG--------TGGEEVVGSLED--GQALSDAIMGVSAVLHL 84 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHT-TCCEEEEESSCCS--------SCCSEEESCTTC--HHHHHHHHTTCSEEEEC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCC--------CCccEEecCcCC--HHHHHHHHhCCCEEEEC
Confidence 45678999999 599999999999987 4789999998754 468889999998 88999999999999999
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 85 A~~ 87 (347)
T 4id9_A 85 GAF 87 (347)
T ss_dssp CCC
T ss_pred Ccc
Confidence 853
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=97.77 E-value=8.4e-05 Score=81.85 Aligned_cols=78 Identities=18% Similarity=0.313 Sum_probs=64.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEE-EeecCCCCchHHHhhccCCc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEAT-LIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v-~lDV~D~~~e~L~elI~~~D 635 (1201)
.++++|+|.| +|++|+.+++.|++. +++|++.+|+.++.+.+...+ ++++.+ ..|+.| .+.+.++++++|
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~d 85 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK--QGAYDEVIKGAA 85 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS--TTTTTTTTTTCS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC--hHHHHHHHcCCC
Confidence 3468999999 599999999999987 579999999988776665432 467777 789998 788999999999
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 86 ~vih~A~~ 93 (342)
T 1y1p_A 86 GVAHIASV 93 (342)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99999853
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=7.5e-05 Score=88.51 Aligned_cols=120 Identities=13% Similarity=0.209 Sum_probs=85.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhcc---CCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVR---SADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~---~~DVVIs 639 (1201)
++||+|||+|.||+.++..|++. +++|++.+|+.++++++.+.++ ++.. .+ ++.++++ ++|+||.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~gi~~-----~~----s~~e~v~~l~~aDvVil 74 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-GYTVAIYNRTTSKTEEVFKEHQDKNLVF-----TK----TLEEFVGSLEKPRRIML 74 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHHTTTSCEEE-----CS----SHHHHHHTBCSSCEEEE
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-CCEEEEEcCCHHHHHHHHHhCcCCCeEE-----eC----CHHHHHhhccCCCEEEE
Confidence 36899999999999999999986 5689999999999999887653 3321 21 3444544 4999999
Q ss_pred cCCCccc-HHHHHH---HHHcCCeEEEccCC-hHHHHHHHHHHHHcCCEEEeccccCchhH
Q psy12817 640 LLPYNLH-HHVAEF---CIQHGKNLVTASYL-SPEMMALHERAASAGITVLNEVGLDPGID 695 (1201)
Q Consensus 640 ~lP~~~h-~~Vaka---cIeaGkh~VD~Syv-s~e~~eLde~AkeAGVtil~e~GlDPGId 695 (1201)
|+|...+ ..+++. +++.|+.++|.+-. .....++.+.+++.|+.++. +++..|..
T Consensus 75 avp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~-~pv~gg~~ 134 (474)
T 2iz1_A 75 MVQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIG-TGVSGGEK 134 (474)
T ss_dssp CCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEE-EEECSHHH
T ss_pred EccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEEC-CCCCCChh
Confidence 9997533 344432 34568889998753 44566776777777888763 45555533
|
| >1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.76 E-value=4.3e-05 Score=87.06 Aligned_cols=100 Identities=11% Similarity=0.181 Sum_probs=72.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEe-ecCC----C---CchHHHhhccCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLI-DVNN----G---GSDNLSGLVRSAD 635 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~l-DV~D----~---~~e~L~elI~~~D 635 (1201)
|.||+|+|+|++|+.+++.|.+++++++ .+++++.+.+..++... ++....- |..+ . ..+.++++.+++|
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~-g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vD 79 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRR-GIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD 79 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHT-TCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred CeEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhc-CcceecCcCHHHHhcccccccccCHhHhhcCCC
Confidence 4699999999999999999999888885 57888877766666543 2322110 1100 0 0002234445799
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 636 LVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 636 VVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+|+.|+|...+.+.+..++++|+..|+.|-
T Consensus 80 vV~~aTp~~~s~~~a~~~~~aG~kvV~~sa 109 (340)
T 1b7g_O 80 IVVDTTPNGVGAQYKPIYLQLQRNAIFQGG 109 (340)
T ss_dssp EEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred EEEECCCCchhHHHHHHHHHcCCeEEEeCC
Confidence 999999999999999999999999999864
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=6.7e-05 Score=82.74 Aligned_cols=102 Identities=13% Similarity=0.132 Sum_probs=78.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+.++++|+| +|.+|+.++..|++.+ .+|++++|+.++++++++.+ .++..+.+|++| .+++.++++++|+|||
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G-~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~DvlVn 194 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEG-AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD--DASRAEAVKGAHFVFT 194 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS--HHHHHHHTTTCSEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC--HHHHHHHHHhCCEEEE
Confidence 458999999 8999999999999874 67999999999988887654 245677889998 7889999999999999
Q ss_pred cCCCccc-HHHHHHH-HHcCCeEEEccCChH
Q psy12817 640 LLPYNLH-HHVAEFC-IQHGKNLVTASYLSP 668 (1201)
Q Consensus 640 ~lP~~~h-~~Vakac-IeaGkh~VD~Syvs~ 668 (1201)
++|..+. .+..... ++....++|..|...
T Consensus 195 ~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~ 225 (287)
T 1lu9_A 195 AGAIGLELLPQAAWQNESSIEIVADYNAQPP 225 (287)
T ss_dssp CCCTTCCSBCHHHHTTCTTCCEEEECCCSSS
T ss_pred CCCccccCCChhHcCchHHHHHHHHhhhhhh
Confidence 9985432 1222222 255566888877543
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=97.76 E-value=1.3e-05 Score=87.09 Aligned_cols=69 Identities=19% Similarity=0.262 Sum_probs=60.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC-CcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS-ADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~-~DVVIs~lP 642 (1201)
||+|+|.|+|++|+.+++.|.+. +++|++.+|+.++. .++++.+..|+.| .+.+.+++++ +|+||++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~~~~------~~~~~~~~~Dl~d--~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ-GHEVTGLRRSAQPM------PAGVQTLIADVTR--PDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEEECTTSCC------CTTCCEEECCTTC--GGGCTTGGGGCCSEEEECHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCcccc------ccCCceEEccCCC--hHHHHHhhcCCCCEEEEeCC
Confidence 68999999999999999999987 57899999987652 1478899999998 8888888887 999999974
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=97.75 E-value=3.3e-05 Score=81.46 Aligned_cols=77 Identities=19% Similarity=0.296 Sum_probs=62.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
++|+|+|.| +|++|+.+++.|++.+.. +|++.+|+.++++.+.. +++..+..|+.| .+.+.++++++|+||++.
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~d--~~~~~~~~~~~d~vi~~a 92 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY--KNVNQEVVDFEK--LDDYASAFQGHDVGFCCL 92 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG--GGCEEEECCGGG--GGGGGGGGSSCSEEEECC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc--CCceEEecCcCC--HHHHHHHhcCCCEEEECC
Confidence 357999999 799999999999987532 89999998765543322 357888999998 889999999999999998
Q ss_pred CCc
Q psy12817 642 PYN 644 (1201)
Q Consensus 642 P~~ 644 (1201)
...
T Consensus 93 g~~ 95 (242)
T 2bka_A 93 GTT 95 (242)
T ss_dssp CCC
T ss_pred Ccc
Confidence 643
|
| >3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.74 E-value=8.5e-06 Score=91.88 Aligned_cols=112 Identities=18% Similarity=0.150 Sum_probs=80.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
..++|+|||+|.+|+.+++.|.+ .+..+|+|.||+ +++++++++. ++.... . +++++++++|+||+
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~-------~-~~~eav~~aDIVi~ 189 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARM-------A-APADIAAQADIVVT 189 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEE-------C-CHHHHHHHCSEEEE
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEE-------e-CHHHHHhhCCEEEE
Confidence 35799999999999999999986 455579999999 7777766531 333222 1 35667788999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcC-CEEEe
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAG-ITVLN 686 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAG-Vtil~ 686 (1201)
|+|... +-+-...++.|+|+++.+...+.+++++....+.+ ..++.
T Consensus 190 aT~s~~-pvl~~~~l~~G~~V~~vGs~~p~~~El~~~~~~~a~~v~vD 236 (313)
T 3hdj_A 190 ATRSTT-PLFAGQALRAGAFVGAIGSSLPHTRELDDEALRRARAVVVE 236 (313)
T ss_dssp CCCCSS-CSSCGGGCCTTCEEEECCCSSTTCCCCCHHHHHHCSEEEES
T ss_pred ccCCCC-cccCHHHcCCCcEEEECCCCCCchhhcCHHHHhcCCEEEEC
Confidence 998642 22223567899999999877677788877766555 34443
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.73 E-value=1.7e-05 Score=84.25 Aligned_cols=90 Identities=21% Similarity=0.259 Sum_probs=66.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITL-GSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtV-adR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+|+||+|||+|.||..++..|.+. +++|++ .+|++++++++++.+ ++.... .+ .+.++++|+||.|+|
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~~~~~~l~~~~-g~~~~~---~~------~~~~~~aDvVilavp 90 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAA-QIPAIIANSRGPASLSSVTDRF-GASVKA---VE------LKDALQADVVILAVP 90 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCGGGGHHHHHHH-TTTEEE---CC------HHHHTTSSEEEEESC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCHHHHHHHHHHh-CCCccc---Ch------HHHHhcCCEEEEeCC
Confidence 478999999999999999999986 568888 999999999988776 333211 11 223578999999999
Q ss_pred CcccHHHHHHHH-HcCCeEEEcc
Q psy12817 643 YNLHHHVAEFCI-QHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~VakacI-eaGkh~VD~S 664 (1201)
...+..+++... ..++.+++.+
T Consensus 91 ~~~~~~v~~~l~~~~~~ivi~~~ 113 (220)
T 4huj_A 91 YDSIADIVTQVSDWGGQIVVDAS 113 (220)
T ss_dssp GGGHHHHHTTCSCCTTCEEEECC
T ss_pred hHHHHHHHHHhhccCCCEEEEcC
Confidence 877766665321 1355666664
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=97.72 E-value=4.7e-05 Score=82.03 Aligned_cols=88 Identities=13% Similarity=0.263 Sum_probs=63.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC---CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN---IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~---~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
++||.|||+|.||..++..|.+.+. .+|++.||++++++++++.+ ++.. . .+..++++++|+||.|+
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-g~~~-----~----~~~~e~~~~aDvVilav 71 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY-GLTT-----T----TDNNEVAKNADILILSI 71 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH-CCEE-----C----SCHHHHHHHCSEEEECS
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh-CCEE-----e----CChHHHHHhCCEEEEEe
Confidence 5799999999999999999998642 27999999999999988766 4432 2 23556677899999999
Q ss_pred CCcccHHHHHHH---HHcCCeEEE
Q psy12817 642 PYNLHHHVAEFC---IQHGKNLVT 662 (1201)
Q Consensus 642 P~~~h~~Vakac---IeaGkh~VD 662 (1201)
|......+++.. ++.++.+++
T Consensus 72 ~~~~~~~v~~~l~~~l~~~~~vvs 95 (247)
T 3gt0_A 72 KPDLYASIINEIKEIIKNDAIIVT 95 (247)
T ss_dssp CTTTHHHHC---CCSSCTTCEEEE
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEE
Confidence 876655555432 233445554
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=7.8e-05 Score=83.41 Aligned_cols=104 Identities=17% Similarity=0.214 Sum_probs=74.0
Q ss_pred cccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH------------------HHHHHHHHH----cCCeeEEE
Q psy12817 559 DIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK------------------EDIDKVTNE----FGRVEATL 616 (1201)
Q Consensus 559 ~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~------------------ekAe~La~~----~~~v~~v~ 616 (1201)
..+..+..||+|+|+|.+|.+++++|++.+--+++++|.+. .|++.+++. .|.++...
T Consensus 30 ~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~ 109 (292)
T 3h8v_A 30 DYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV 109 (292)
T ss_dssp --CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence 34456678999999999999999999998766899999876 455544433 35554433
Q ss_pred --eecCCCCchHHHhhc-----------cCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 617 --IDVNNGGSDNLSGLV-----------RSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 --lDV~D~~~e~L~elI-----------~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~S 664 (1201)
.++++ .+.+.+++ +++|+||+|+-.. .-..+.++|.+.++.+|+..
T Consensus 110 ~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pli~~g 169 (292)
T 3h8v_A 110 HNYNITT--VENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESG 169 (292)
T ss_dssp ECCCTTS--HHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ecccCCc--HHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCEEEee
Confidence 33433 35566554 6899999999543 33567889999999988764
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.70 E-value=9.3e-05 Score=81.71 Aligned_cols=77 Identities=18% Similarity=0.212 Sum_probs=61.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENI---HITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~---~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
++||.|||+|.||..++..|.+.+ + +|++.||+.++++++++.+ ++.. . .+..+.++++|+||.|+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g-~~~~~V~v~dr~~~~~~~l~~~~-gi~~-----~----~~~~~~~~~aDvVilav 71 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANG-YDPNRICVTNRSLDKLDFFKEKC-GVHT-----T----QDNRQGALNADVVVLAV 71 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTT-CCGGGEEEECSSSHHHHHHHHTT-CCEE-----E----SCHHHHHSSCSEEEECS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC-CCCCeEEEEeCCHHHHHHHHHHc-CCEE-----e----CChHHHHhcCCeEEEEe
Confidence 579999999999999999999875 5 7999999999999998766 4432 1 13456678999999999
Q ss_pred CCcccHHHHHH
Q psy12817 642 PYNLHHHVAEF 652 (1201)
Q Consensus 642 P~~~h~~Vaka 652 (1201)
|......+.+.
T Consensus 72 ~p~~~~~vl~~ 82 (280)
T 3tri_A 72 KPHQIKMVCEE 82 (280)
T ss_dssp CGGGHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 87655555543
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.69 E-value=9.1e-05 Score=81.24 Aligned_cols=81 Identities=16% Similarity=0.256 Sum_probs=56.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEE--------eecCCCCchHHHhhccCCc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATL--------IDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~--------lDV~D~~~e~L~elI~~~D 635 (1201)
.|+||+|||+|.||..++..|.+. +++|++.+|+.++++.+.+. +..... +++.+ .+++.+.++++|
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d 76 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWPAHIEAIRKN--GLIADFNGEEVVANLPIFS--PEEIDHQNEQVD 76 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHH--CEEEEETTEEEEECCCEEC--GGGCCTTSCCCS
T ss_pred CCCeEEEECcCHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHhC--CEEEEeCCCeeEecceeec--chhhcccCCCCC
Confidence 367999999999999999999986 47899999999999888764 232211 12222 223333455899
Q ss_pred EEEEcCCCcccHHH
Q psy12817 636 LVVSLLPYNLHHHV 649 (1201)
Q Consensus 636 VVIs~lP~~~h~~V 649 (1201)
+||.|+|......+
T Consensus 77 ~vi~~v~~~~~~~v 90 (316)
T 2ew2_A 77 LIIALTKAQQLDAM 90 (316)
T ss_dssp EEEECSCHHHHHHH
T ss_pred EEEEEeccccHHHH
Confidence 99999996543333
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=9.9e-05 Score=83.64 Aligned_cols=96 Identities=15% Similarity=0.173 Sum_probs=70.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHH--HHHHHHcCCeeEEEee-cCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDI--DKVTNEFGRVEATLID-VNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekA--e~La~~~~~v~~v~lD-V~D~~~e~L~elI~~~DVVIs~ 640 (1201)
+|+|+|.| +|++|+.+++.|++. +++|++.+|+.++. +.+.. .++++.+..| +.| .+.+.++++++|+||++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~l~~-~~~v~~v~~D~l~d--~~~l~~~~~~~d~Vi~~ 80 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGLIAEELQA-IPNVTLFQGPLLNN--VPLMDTLFEGAHLAFIN 80 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSHHHHHHHT-STTEEEEESCCTTC--HHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCCChhhHHHHhh-cCCcEEEECCccCC--HHHHHHHHhcCCEEEEc
Confidence 57899999 699999999999986 57899999987654 44432 2468889999 988 88999999999999988
Q ss_pred CCCc------ccHHHHHHHHHcC-C-eEEEcc
Q psy12817 641 LPYN------LHHHVAEFCIQHG-K-NLVTAS 664 (1201)
Q Consensus 641 lP~~------~h~~VakacIeaG-k-h~VD~S 664 (1201)
.... ....++++|.++| + ++|-+|
T Consensus 81 a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~S 112 (352)
T 1xgk_A 81 TTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS 112 (352)
T ss_dssp CCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHHHcCCccEEEEeC
Confidence 7532 1233445555555 2 444443
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.67 E-value=2e-05 Score=89.98 Aligned_cols=94 Identities=14% Similarity=0.171 Sum_probs=67.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeE-EEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEA-TLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~-v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|+||+|+| +|++|+.+++.|.++++++++.+.+..+..+++...++...- ..+.+.+ .+ + +.++|+|+.|+|
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~--~~---~-~~~vDvV~~a~g 77 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVP--PE---K-LEPADILVLALP 77 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBC--GG---G-CCCCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccc--hh---H-hcCCCEEEEcCC
Confidence 57999999 699999999999988888876655443333333332221100 0112222 22 3 478999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEcc
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S 664 (1201)
...+.+.+..++++|+++||.|
T Consensus 78 ~~~s~~~a~~~~~aG~~VId~S 99 (345)
T 2ozp_A 78 HGVFAREFDRYSALAPVLVDLS 99 (345)
T ss_dssp TTHHHHTHHHHHTTCSEEEECS
T ss_pred cHHHHHHHHHHHHCCCEEEEcC
Confidence 9999999999999999999986
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=7.9e-05 Score=84.57 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=62.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+||+|+|.| +|++|+.+++.|++. +++|++.+|+.++..... .++++.+..|+.| .+.+.++++++|+||++..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~--~~~v~~~~~Dl~d--~~~~~~~~~~~d~Vih~A~ 102 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHE-GHYVIASDWKKNEHMTED--MFCDEFHLVDLRV--MENCLKVTEGVDHVFNLAA 102 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSSSCGG--GTCSEEEECCTTS--HHHHHHHHTTCSEEEECCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHC-CCeEEEEECCCccchhhc--cCCceEEECCCCC--HHHHHHHhCCCCEEEECce
Confidence 578999999 599999999999987 578999999866543221 2468889999998 8899999999999999985
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 103 ~ 103 (379)
T 2c5a_A 103 D 103 (379)
T ss_dssp C
T ss_pred e
Confidence 4
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.66 E-value=6.7e-05 Score=74.92 Aligned_cols=104 Identities=14% Similarity=0.178 Sum_probs=76.0
Q ss_pred cCCCeEEEEcC----chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 563 EESRNVLLLGA----GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILGA----G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
...++|+|+|+ |.+|..++++|.+. +++|+..+++.++ ..+++. ..++.++...+|+|+
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~-G~~V~~vnp~~~~-------i~G~~~---------~~s~~el~~~vDlvi 74 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSK-GFEVLPVNPNYDE-------IEGLKC---------YRSVRELPKDVDVIV 74 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTTCSE-------ETTEEC---------BSSGGGSCTTCCEEE
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHC-CCEEEEeCCCCCe-------ECCeee---------cCCHHHhCCCCCEEE
Confidence 34689999999 99999999999886 5676666665321 113331 224556666899999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEE--ccCChHHHHHHHHHHHHcCCEEEe
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVT--ASYLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD--~Syvs~e~~eLde~AkeAGVtil~ 686 (1201)
.++|...+.++++.|+++|+..+- .+.. .+++.+.|+++|+.++.
T Consensus 75 i~vp~~~v~~v~~~~~~~g~~~i~~~~~~~---~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 75 FVVPPKVGLQVAKEAVEAGFKKLWFQPGAE---SEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCEEEECTTSC---CHHHHHHHHHHTCEEEC
T ss_pred EEeCHHHHHHHHHHHHHcCCCEEEEcCccH---HHHHHHHHHHCCCEEEc
Confidence 999988889999999999886443 3333 46667779999999873
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00014 Score=80.37 Aligned_cols=75 Identities=17% Similarity=0.341 Sum_probs=59.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-H----HHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-E----DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-e----kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DV 636 (1201)
||+|+|.| +|++|+.+++.|++. +.+|++.+|+. . .++.+.. .+++..+..|+.| .+.+.+++++ +|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d--~~~~~~~~~~~~~d~ 76 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRN--KNDVTRLITKYMPDS 76 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTC--HHHHHHHHHHHCCSE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC-CCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCC--HHHHHHHHhccCCCE
Confidence 68999999 799999999999986 57899998742 1 2233322 2358889999998 8889999988 999
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 77 vih~A~~ 83 (347)
T 1orr_A 77 CFHLAGQ 83 (347)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999864
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00018 Score=85.66 Aligned_cols=124 Identities=10% Similarity=0.147 Sum_probs=87.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.|++|+|||+|.||.+++..|++. +++|++.||++++++++.+.. .+..... ..+ .+++.+.++++|+||.|+|
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~g~~g~~i~~--~~s--~~e~v~~l~~aDvVil~Vp 77 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTVSKVDDFLANEAKGTKVVG--AQS--LKEMVSKLKKPRRIILLVK 77 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSTHHHHHHHHTTTTTSSCEE--CSS--HHHHHHTBCSSCEEEECSC
T ss_pred CCCEEEEEChhHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcccCCCceec--cCC--HHHHHhhccCCCEEEEecC
Confidence 468999999999999999999987 478999999999999887642 1211110 122 3344444457999999999
Q ss_pred Ccc-cHHHHHHH---HHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 643 YNL-HHHVAEFC---IQHGKNLVTASYLS-PEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 643 ~~~-h~~Vakac---IeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
... ...+++.. ++.|..++|.+-.. ....++.+..++.|+.++. +++.-|
T Consensus 78 ~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd-~pVsGg 132 (484)
T 4gwg_A 78 AGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVG-SGVSGG 132 (484)
T ss_dssp SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-EEEESH
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhcccccc-CCccCC
Confidence 753 33444433 35688899997644 4566777778889998775 454433
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00014 Score=85.21 Aligned_cols=114 Identities=13% Similarity=0.132 Sum_probs=77.8
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----Cee--------EEEeecCCCCchHHHhhcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RVE--------ATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v~--------~v~lDV~D~~~e~L~elI~ 632 (1201)
|||+|||+|+||.+++..|++. +++|+++||++++++.+.+... +.. .-.+..+ .++.+.++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t----~~~~~~~~ 75 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGT----TDFKKAVL 75 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE----SCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEe----CCHHHHhc
Confidence 5899999999999999999986 5789999999999988876310 000 0001111 23556678
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHc--CCEEEeccccCchh
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASA--GITVLNEVGLDPGI 694 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeA--GVtil~e~GlDPGI 694 (1201)
++|+||.|+|...+. . +..|++|+....+++.+..++. |..+++..+..||.
T Consensus 76 ~aDvviiaVptp~~~--------~--~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~ 129 (436)
T 1mv8_A 76 DSDVSFICVGTPSKK--------N--GDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGT 129 (436)
T ss_dssp TCSEEEECCCCCBCT--------T--SSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTH
T ss_pred cCCEEEEEcCCCccc--------C--CCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCc
Confidence 999999999876541 1 2356666655555554444331 77777777888887
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00016 Score=82.50 Aligned_cols=100 Identities=20% Similarity=0.204 Sum_probs=73.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCeeEEEee-
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRVEATLID- 618 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v~~v~lD- 618 (1201)
.+..||+|+|+|.+|.+++++|++.+--+++++|++. .|++.+++ ..|+++....+
T Consensus 32 L~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~ 111 (340)
T 3rui_A 32 IKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKL 111 (340)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECC
T ss_pred HhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEec
Confidence 4578999999999999999999998766899998754 34544443 34666654433
Q ss_pred -c--------------CCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 619 -V--------------NNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 619 -V--------------~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
+ .+ .+.+.++++++|+||+|+-. .....+.++|.++|+.+++.+
T Consensus 112 ~i~~~g~~~~~~~~~~~~--~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa 171 (340)
T 3rui_A 112 SIPMIGHKLVNEEAQHKD--FDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA 171 (340)
T ss_dssp CCCCTTSCCSCHHHHHHH--HHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE
T ss_pred cccccCcccchhhhhcCC--HHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee
Confidence 2 01 34567889999999999943 344667788888888888753
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00014 Score=77.45 Aligned_cols=108 Identities=15% Similarity=0.086 Sum_probs=79.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~ 643 (1201)
.++|+|+|+|.+|+.+++.|.+. ++ |+++++++++++.+. .++..+..|.+| .+.+.++ ++++|+||.++|.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~~~~~~~~---~~~~~i~gd~~~--~~~l~~a~i~~ad~vi~~~~~ 81 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS-EV-FVLAEDENVRKKVLR---SGANFVHGDPTR--VSDLEKANVRGARAVIVDLES 81 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS-EE-EEEESCGGGHHHHHH---TTCEEEESCTTC--HHHHHHTTCTTCSEEEECCSC
T ss_pred CCEEEEECCChHHHHHHHHHHhC-Ce-EEEEECCHHHHHHHh---cCCeEEEcCCCC--HHHHHhcCcchhcEEEEcCCC
Confidence 57899999999999999999876 46 999999999888766 368889999998 7888776 8999999999986
Q ss_pred c-ccHHHHHHHHHcCC--eEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 644 N-LHHHVAEFCIQHGK--NLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 644 ~-~h~~VakacIeaGk--h~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
. .+..++..|-+.+. +++.......... ..++.|+.
T Consensus 82 d~~n~~~~~~a~~~~~~~~iia~~~~~~~~~----~l~~~G~~ 120 (234)
T 2aef_A 82 DSETIHCILGIRKIDESVRIIAEAERYENIE----QLRMAGAD 120 (234)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECSSGGGHH----HHHHHTCS
T ss_pred cHHHHHHHHHHHHHCCCCeEEEEECCHhHHH----HHHHCCCC
Confidence 4 34455566666665 4444333222222 23456765
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0001 Score=76.82 Aligned_cols=93 Identities=20% Similarity=0.227 Sum_probs=62.5
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC-eeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR-VEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~-v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|||+|+| +|.+|+.++..|.+. +++|++.+|+.++++++.+.+.. +. ..|+. .+.+.+.++++|+||.|+|.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~D~Vi~~~~~ 74 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL-GHEIVVGSRREEKAEAKAAEYRRIAG--DASIT---GMKNEDAAEACDIAVLTIPW 74 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSHHHHHHHHHHHHHHHS--SCCEE---EEEHHHHHHHCSEEEECSCH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhccccc--cCCCC---hhhHHHHHhcCCEEEEeCCh
Confidence 5899999 999999999999876 47899999999988887664310 00 00010 12355567789999999996
Q ss_pred cccHHHHHHHHH--cCCeEEEcc
Q psy12817 644 NLHHHVAEFCIQ--HGKNLVTAS 664 (1201)
Q Consensus 644 ~~h~~VakacIe--aGkh~VD~S 664 (1201)
.....+++...+ .++.++|.+
T Consensus 75 ~~~~~~~~~l~~~~~~~~vi~~~ 97 (212)
T 1jay_A 75 EHAIDTARDLKNILREKIVVSPL 97 (212)
T ss_dssp HHHHHHHHHTHHHHTTSEEEECC
T ss_pred hhHHHHHHHHHHHcCCCEEEEcC
Confidence 654444432111 255666654
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0002 Score=78.50 Aligned_cols=70 Identities=17% Similarity=0.237 Sum_probs=56.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
||+|+|.| +|++|+.+++.|.++ +.+|++.+|+....+ + ++++.+..|+. .+.+.++++++|+||+|...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~-~----~~~~~~~~Dl~---~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND-GNTPIILTRSIGNKA-I----NDYEYRVSDYT---LEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCC----------CCEEEECCCC---HHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCCCCccc-C----CceEEEEcccc---HHHHHHhhcCCCEEEEcccc
Confidence 68999999 799999999999987 579999999944433 3 26888888986 46899999999999999854
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00022 Score=84.06 Aligned_cols=119 Identities=15% Similarity=0.180 Sum_probs=76.7
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----Cee--------EEEeecCCCCchHHHhhcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RVE--------ATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v~--------~v~lDV~D~~~e~L~elI~ 632 (1201)
|||.|||+|+||.+++..|++. +++|++.|+++++++.+.+... +.. .-.+.++ .++.++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t----~d~~ea~~ 77 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG----TEIEQAVP 77 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE----SCHHHHGG
T ss_pred CEEEEECcCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE----CCHHHHHh
Confidence 7999999999999999999987 5799999999999998876321 000 0001111 24666788
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
++|+||.|+|...+.. | -.|++++....+.+.+ .-+.|..++...++.||-..-++.
T Consensus 78 ~aDvViiaVptp~~~~--------~--~~dl~~v~~v~~~i~~-~l~~g~iVV~~STv~pgt~~~l~~ 134 (450)
T 3gg2_A 78 EADIIFIAVGTPAGED--------G--SADMSYVLDAARSIGR-AMSRYILIVTKSTVPVGSYRLIRK 134 (450)
T ss_dssp GCSEEEECCCCCBCTT--------S--SBCCHHHHHHHHHHHH-HCCSCEEEEECSCCCTTHHHHHHH
T ss_pred cCCEEEEEcCCCcccC--------C--CcChHHHHHHHHHHHh-hCCCCCEEEEeeeCCCcchHHHHH
Confidence 9999999998764310 1 1233333233333322 123566777777888886655443
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=6.8e-05 Score=80.83 Aligned_cols=86 Identities=19% Similarity=0.247 Sum_probs=60.8
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
|||+|||+|.||..++..|.+.+..+|++.+|++++++++.+.+ ++... .+ ..+++ ++|+||.|+|...
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~-g~~~~----~~-----~~~~~-~~D~vi~~v~~~~ 69 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL-GVETS----AT-----LPELH-SDDVLILAVKPQD 69 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT-CCEEE----SS-----CCCCC-TTSEEEECSCHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhc-CCEEe----CC-----HHHHh-cCCEEEEEeCchh
Confidence 58999999999999999998763268999999999999988765 44321 11 23456 8999999999443
Q ss_pred cHHHHHHHH-HcCCeEEEc
Q psy12817 646 HHHVAEFCI-QHGKNLVTA 663 (1201)
Q Consensus 646 h~~VakacI-eaGkh~VD~ 663 (1201)
...+++... + ++.+++.
T Consensus 70 ~~~v~~~l~~~-~~ivv~~ 87 (263)
T 1yqg_A 70 MEAACKNIRTN-GALVLSV 87 (263)
T ss_dssp HHHHHTTCCCT-TCEEEEC
T ss_pred HHHHHHHhccC-CCEEEEe
Confidence 333332111 2 5556665
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00015 Score=81.04 Aligned_cols=108 Identities=15% Similarity=0.206 Sum_probs=79.3
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
...+|+|+|+ |.+|+.+++.|.+. +++ .|+..++.+.. ...-++.. ..+++++.+ ++|++|.+
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~-g~~-~V~~VnP~~~g---~~i~G~~v---------y~sl~el~~~~~~Dv~ii~ 77 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLEC-GTK-IVGGVTPGKGG---QNVHGVPV---------FDTVKEAVKETDANASVIF 77 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHT-TCC-EEEEECTTCTT---CEETTEEE---------ESSHHHHHHHHCCCEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhC-CCe-EEEEeCCCCCC---ceECCEee---------eCCHHHHhhcCCCCEEEEc
Confidence 3467899996 99999999999886 566 44455554320 01113332 124555666 89999999
Q ss_pred CCCcccHHHHHHHHHcCCe-EEEcc--CChHHHHHHHHHHHHcCCEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKN-LVTAS--YLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh-~VD~S--yvs~e~~eLde~AkeAGVtil 685 (1201)
+|...+..+++.|+++|++ +|..+ +...+++++.+.|++.|+.++
T Consensus 78 vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 78 VPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 9999999999999999999 56544 344567889999999999887
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.58 E-value=5.2e-05 Score=86.61 Aligned_cols=94 Identities=20% Similarity=0.332 Sum_probs=67.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEe-CCHHHHHHHHHHcCCe----------eEEEeecCCCCchHHHhhc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGS-LLKEDIDKVTNEFGRV----------EATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVad-R~~ekAe~La~~~~~v----------~~v~lDV~D~~~e~L~elI 631 (1201)
+|+||+|+| +|++|+.+++.|.++++++++.+. .+....+.+.+.++.. .....|. | .+ + +
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d--~~---~-~ 75 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-N--YE---D-H 75 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-S--GG---G-G
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-C--HH---H-h
Confidence 368999999 799999999999988888876664 2223333344333311 1111121 2 22 2 3
Q ss_pred cCCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 632 RSADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+++|+|+.|+|...|.+++..++++|+++||.|
T Consensus 76 ~~vDvVf~atp~~~s~~~a~~~~~aG~~VId~s 108 (350)
T 2ep5_A 76 KDVDVVLSALPNELAESIELELVKNGKIVVSNA 108 (350)
T ss_dssp TTCSEEEECCCHHHHHHHHHHHHHTTCEEEECS
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCCEEEECC
Confidence 689999999999999999999999999999986
|
| >2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00027 Score=84.48 Aligned_cols=120 Identities=13% Similarity=0.167 Sum_probs=86.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH-HcC--CeeEEEeecCCCCchHHHhhccC---CcEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTN-EFG--RVEATLIDVNNGGSDNLSGLVRS---ADLV 637 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~-~~~--~v~~v~lDV~D~~~e~L~elI~~---~DVV 637 (1201)
...+|.|||+|.||.+++..|++. +++|++.+|++++++++.+ ..+ ++. ..+ ++.+++++ +|+|
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~~~~~~l~~~~~~~~gi~-----~~~----s~~e~v~~l~~aDvV 78 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQSKVDHFLANEAKGKSII-----GAT----SIEDFISKLKRPRKV 78 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSHHHHHHHHTTTTTSSEE-----CCS----SHHHHHHTSCSSCEE
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHcccccCCCeE-----EeC----CHHHHHhcCCCCCEE
Confidence 357999999999999999999987 5789999999999999887 322 322 122 34455554 9999
Q ss_pred EEcCCCc-ccHHHHHHH---HHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEeccccCchh
Q psy12817 638 VSLLPYN-LHHHVAEFC---IQHGKNLVTASYLS-PEMMALHERAASAGITVLNEVGLDPGI 694 (1201)
Q Consensus 638 Is~lP~~-~h~~Vakac---IeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~e~GlDPGI 694 (1201)
|.|+|.. .-..+++.. ++.|.-+||.+-.. ....++.+.+++.|+.++ ++++..|.
T Consensus 79 il~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v-~~pVsgg~ 139 (497)
T 2p4q_A 79 MLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFV-GSGVSGGE 139 (497)
T ss_dssp EECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE-EEEEESHH
T ss_pred EEEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCcee-CCCcccCh
Confidence 9999974 334444433 34578899987544 456677777888898877 34555453
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00017 Score=80.45 Aligned_cols=108 Identities=16% Similarity=0.144 Sum_probs=78.8
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+.+||+|+|+ |.+|+.+++++.+. ++++ ++.-++.+.. ....++.. . .++.++.+ ++|++|.+
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~-g~~~-v~~VnP~~~g---~~i~G~~v-----y----~sl~el~~~~~~Dv~Ii~ 71 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTY-GTKI-VAGVTPGKGG---MEVLGVPV-----Y----DTVKEAVAHHEVDASIIF 71 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCEE-EEEECTTCTT---CEETTEEE-----E----SSHHHHHHHSCCSEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHc-CCeE-EEEECCCCCC---ceECCEEe-----e----CCHHHHhhcCCCCEEEEe
Confidence 4589999996 99999999999876 5773 3333333210 01113332 1 24556666 89999999
Q ss_pred CCCcccHHHHHHHHHcCCe-EEEcc--CChHHHHHHHHHHHHcCCEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKN-LVTAS--YLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh-~VD~S--yvs~e~~eLde~AkeAGVtil 685 (1201)
+|...+..+++.|+++|++ +|..+ +...++.++.+.|++.|+.++
T Consensus 72 vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 72 VPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLI 119 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 9999999999999999999 56554 444567889999999999877
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00035 Score=81.54 Aligned_cols=111 Identities=14% Similarity=0.208 Sum_probs=84.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP 642 (1201)
..++|+|+|+|++|+.+++.|.+. +++|+++|+++++++.+.. . ++.++..|.++ .+.|.++ +.++|+||.+++
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~-~-g~~vi~GDat~--~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRK-F-GMKVFYGDATR--MDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHH-T-TCCCEESCTTC--HHHHHHTTTTTCSEEEECCS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHh-C-CCeEEEcCCCC--HHHHHhcCCCccCEEEECCC
Confidence 346899999999999999999886 5789999999999988764 3 67888999998 8888877 889999999998
Q ss_pred Cc-ccHHHHHHHHHcCC--eEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 643 YN-LHHHVAEFCIQHGK--NLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 643 ~~-~h~~VakacIeaGk--h~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
.. .+..++..|-+.+. +++.-.........| +++|+.
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiara~~~~~~~~L----~~~Gad 117 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRL----RQAGVE 117 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEESSHHHHHHH----HHTTCS
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH----HHCCCC
Confidence 64 34455666666554 455555554444444 456654
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0001 Score=80.43 Aligned_cols=73 Identities=14% Similarity=0.242 Sum_probs=60.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+|+|+|.| +|++|+.+++.|.+. ++++|++.+|+..+.+ +. ++++.+..|+.| .+.+.++++ ++|+||++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~---~~~~~~~~D~~d--~~~~~~~~~~~~~d~vih~ 75 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV---NSGPFEVVNALD--FNQIEHLVEVHKITDIYLM 75 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH---HSSCEEECCTTC--HHHHHHHHHHTTCCEEEEC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc---CCCceEEecCCC--HHHHHHHHhhcCCCEEEEC
Confidence 47899999 599999999999986 4678999999866532 22 257788999998 888999998 89999999
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 76 a~~ 78 (312)
T 2yy7_A 76 AAL 78 (312)
T ss_dssp CCC
T ss_pred Ccc
Confidence 854
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00012 Score=80.67 Aligned_cols=73 Identities=14% Similarity=0.250 Sum_probs=59.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
||+|+|.| +|++|+.+++.|++. +++|++.+|+..... ..+ ++++.+..|+.| .+.+.++++ ++|+||++
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~---~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~d~vih~ 74 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE-GLSVVVVDNLQTGHE---DAITEGAKFYNGDLRD--KAFLRDVFTQENIEAVMHF 74 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCG---GGSCTTSEEEECCTTC--HHHHHHHHHHSCEEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCCCcCch---hhcCCCcEEEECCCCC--HHHHHHHHhhcCCCEEEEC
Confidence 68999999 699999999999987 478999998754322 112 257888999998 888999998 89999999
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 75 a~~ 77 (330)
T 2c20_A 75 AAD 77 (330)
T ss_dssp CCC
T ss_pred Ccc
Confidence 864
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00017 Score=79.57 Aligned_cols=77 Identities=22% Similarity=0.248 Sum_probs=60.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCC-CCeEEEEeCCHH--HHHHHHHH--cCCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDE-NIHITLGSLLKE--DIDKVTNE--FGRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~-~~~VtVadR~~e--kAe~La~~--~~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
+|||+|.| +|++|+.+++.|++.+ +++|++.+|+.. ..+.+... .+++..+..|+.| .+.+.+++.++|+||
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d~vi 80 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVAD--YELVKELVRKVDGVV 80 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTC--HHHHHHHHHTCSEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCC--HHHHHHHhhCCCEEE
Confidence 36899999 6999999999999875 588999988631 12222111 2368889999998 888999999999999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 81 h~A~~ 85 (336)
T 2hun_A 81 HLAAE 85 (336)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99864
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00021 Score=79.08 Aligned_cols=77 Identities=13% Similarity=0.165 Sum_probs=61.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHH----HH-cCCeeEEEeecCCCCchHHHhhcc--CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVT----NE-FGRVEATLIDVNNGGSDNLSGLVR--SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La----~~-~~~v~~v~lDV~D~~~e~L~elI~--~~D 635 (1201)
++|+|+|.| +|++|+.+++.|++. +++|++.+|+.++.++.. .. -.++..+..|+.| .+.+.++++ ++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~d 80 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAH-GYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD--ERALARIFDAHPIT 80 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTC--HHHHHHHHHHSCCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHC-CCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCC--HHHHHHHHhccCCc
Confidence 357999999 799999999999987 578999998765433322 21 1367888999998 889999998 899
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 81 ~vih~A~~ 88 (341)
T 3enk_A 81 AAIHFAAL 88 (341)
T ss_dssp EEEECCCC
T ss_pred EEEECccc
Confidence 99999854
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00018 Score=76.24 Aligned_cols=88 Identities=20% Similarity=0.216 Sum_probs=63.5
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.++||+|||+|.+|+.++..|.+. +++|++.+|+.++++++.+. ++... .+.++++++|+||.|+|.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~--g~~~~----------~~~~~~~~~DvVi~av~~ 93 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGS-GFKVVVGSRNPKRTARLFPS--AAQVT----------FQEEAVSSPEVIFVAVFR 93 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSHHHHHHHSBT--TSEEE----------EHHHHTTSCSEEEECSCG
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--CCcee----------cHHHHHhCCCEEEECCCh
Confidence 468999999999999999999886 46899999999988877543 34321 244567899999999986
Q ss_pred cccHHHH--HHHHHcCCeEEEccC
Q psy12817 644 NLHHHVA--EFCIQHGKNLVTASY 665 (1201)
Q Consensus 644 ~~h~~Va--kacIeaGkh~VD~Sy 665 (1201)
.....+. ...+ .++.++|.+-
T Consensus 94 ~~~~~v~~l~~~~-~~~~vv~~s~ 116 (215)
T 2vns_A 94 EHYSSLCSLSDQL-AGKILVDVSN 116 (215)
T ss_dssp GGSGGGGGGHHHH-TTCEEEECCC
T ss_pred HHHHHHHHHHHhc-CCCEEEEeCC
Confidence 5332332 2223 6777888764
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00034 Score=73.88 Aligned_cols=78 Identities=17% Similarity=0.229 Sum_probs=66.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC---CcEEE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS---ADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~---~DVVI 638 (1201)
.+.|+|+|.| +|++|+.+++.|++. +.+|++.+|+.++++++.+..++++.+.+|++| .+.+++++++ .|+||
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~id~vi 81 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD--WDATEKALGGIGPVDLLV 81 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHTTCCCCSEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCCcEEecCCC--HHHHHHHHHHcCCCCEEE
Confidence 3458999999 699999999999987 578999999999888887766678888999998 8888888764 79999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 82 ~~Ag~ 86 (244)
T 1cyd_A 82 NNAAL 86 (244)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99853
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=97.50 E-value=6.3e-05 Score=75.60 Aligned_cols=103 Identities=19% Similarity=0.180 Sum_probs=73.8
Q ss_pred CCeEEEEcC----chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGA----GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGA----G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++|+|||+ |.+|..++++|.+.+ ++|+.+++.. + .+...+++. . .++.++...+|+|+.|
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vnp~~--~---g~~i~G~~~-----~----~sl~el~~~~Dlvii~ 77 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVSPKV--A---GKTLLGQQG-----Y----ATLADVPEKVDMVDVF 77 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEECSSS--T---TSEETTEEC-----C----SSTTTCSSCCSEEECC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeCCcc--c---ccccCCeec-----c----CCHHHcCCCCCEEEEE
Confidence 578999998 899999999998764 6776666654 1 001113321 1 2344555689999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEc--cCChHHHHHHHHHHHHcCCEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTA--SYLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~--Syvs~e~~eLde~AkeAGVtil 685 (1201)
+|......+++.|+++|+..+-. +.. .+++.+.|+++|+.++
T Consensus 78 vp~~~v~~v~~~~~~~g~~~i~i~~~~~---~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 78 RNSEAAWGVAQEAIAIGAKTLWLQLGVI---NEQAAVLAREAGLSVV 121 (145)
T ss_dssp SCSTHHHHHHHHHHHHTCCEEECCTTCC---CHHHHHHHHTTTCEEE
T ss_pred eCHHHHHHHHHHHHHcCCCEEEEcCChH---HHHHHHHHHHcCCEEE
Confidence 99888899999999999653332 333 4667777999999998
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00044 Score=76.69 Aligned_cols=76 Identities=21% Similarity=0.251 Sum_probs=60.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH----------HHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK----------EDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~----------ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
+|+|+|.| +|++|+.+++.|++. +++|++.+|+. +.++.+.... .++..+..|+.| .+.+.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~ 78 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEA-GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILD--QGALQRLFK 78 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT-TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTC--HHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCC--HHHHHHHHH
Confidence 47999999 799999999999987 57899888743 3344443321 367889999998 888999888
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
++|+||++...
T Consensus 79 ~~~~d~vih~A~~ 91 (348)
T 1ek6_A 79 KYSFMAVIHFAGL 91 (348)
T ss_dssp HCCEEEEEECCSC
T ss_pred hcCCCEEEECCCC
Confidence 79999999854
|
| >1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00082 Score=79.81 Aligned_cols=123 Identities=11% Similarity=0.157 Sum_probs=83.0
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC---eeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR---VEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~---v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|||+|||+|.||..++..|++. +++|++.+|+.++++++.+.+.. ...+. -..+ .+++.+.++++|+||.|+|
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~-~~~~--~~e~v~~l~~aDvVilaVp 77 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK-GFKVAVFNRTYSKSEEFMKANASAPFAGNLK-AFET--MEAFAASLKKPRKALILVQ 77 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHHTTTSTTGGGEE-ECSC--HHHHHHHBCSSCEEEECCC
T ss_pred CEEEEEChHHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCCCCCCCeE-EECC--HHHHHhcccCCCEEEEecC
Confidence 5899999999999999999986 46899999999999988875421 00011 1222 3333333346999999999
Q ss_pred Cccc-HHHHH---HHHHcCCeEEEccC-ChHHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 643 YNLH-HHVAE---FCIQHGKNLVTASY-LSPEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 643 ~~~h-~~Vak---acIeaGkh~VD~Sy-vs~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
...+ ..+++ ..++.|+.+||.+- ......++.+.+++.|+.++. +++..|
T Consensus 78 ~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~-~pv~gg 132 (478)
T 1pgj_A 78 AGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLG-MGISGG 132 (478)
T ss_dssp CSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEE-EEEESH
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEE-eeccCC
Confidence 7533 34443 23456888999864 334556676777777887763 455444
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.50 E-value=4.3e-05 Score=87.71 Aligned_cols=95 Identities=18% Similarity=0.257 Sum_probs=67.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeE-EEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEA-TLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~-v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
++||+|+| +|++|+.+++.|.++++++++.+.+..+..+++...++.... +..|+.- . . ++.++++|+|+.|+|
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~--~-~-~~~~~~vDvVf~atp 91 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVS--V-K-DADFSTVDAVFCCLP 91 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBC--G-G-GCCGGGCSEEEECCC
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCccccccee--c-c-hhHhcCCCEEEEcCC
Confidence 36999999 799999999999998888866554433333344433322110 0023221 2 2 445578999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEcc
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S 664 (1201)
...+.+.+..+ ++|+++||.|
T Consensus 92 ~~~s~~~a~~~-~aG~~VId~s 112 (359)
T 1xyg_A 92 HGTTQEIIKEL-PTALKIVDLS 112 (359)
T ss_dssp TTTHHHHHHTS-CTTCEEEECS
T ss_pred chhHHHHHHHH-hCCCEEEECC
Confidence 99999999999 9999999986
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00033 Score=81.40 Aligned_cols=95 Identities=16% Similarity=0.139 Sum_probs=69.2
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.+++.|...+-.+|++++|+.+++++++..+ ++.. + + .+.+.+++.++|+||+|+|
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~-g~~~--~---~--~~~l~~~l~~aDvVi~at~ 236 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-GGEA--V---R--FDELVDHLARSDVVVSATA 236 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-TCEE--C---C--GGGHHHHHHTCSEEEECCS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-CCce--e---c--HHhHHHHhcCCCEEEEccC
Confidence 45689999999999999999998764338999999999998888877 3432 2 2 3457777889999999998
Q ss_pred Cccc---HHHHHH-HHH----cCCeEEEccC
Q psy12817 643 YNLH---HHVAEF-CIQ----HGKNLVTASY 665 (1201)
Q Consensus 643 ~~~h---~~Vaka-cIe----aGkh~VD~Sy 665 (1201)
...+ ....+. +++ .+.-++|.++
T Consensus 237 ~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 237 APHPVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp SSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred CCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 6543 244444 443 2334666654
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00027 Score=74.38 Aligned_cols=76 Identities=14% Similarity=0.141 Sum_probs=64.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~DV 636 (1201)
+++|+|.| +|++|+.+++.|++. +++|++.+|+.++++++.+.++++..+.+|++| .+.++++++ +.|+
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAK-GYRVGLMARDEKRLQALAAELEGALPLPGDVRE--EGDWARAVAAMEEAFGELSA 81 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhhceEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 46899999 799999999999986 578999999999988888777678889999998 777777665 6799
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 82 li~~Ag~ 88 (234)
T 2ehd_A 82 LVNNAGV 88 (234)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999853
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00064 Score=80.43 Aligned_cols=120 Identities=14% Similarity=0.179 Sum_probs=89.4
Q ss_pred cccccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCc
Q psy12817 557 KADIQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSAD 635 (1201)
Q Consensus 557 ~~~~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~D 635 (1201)
.........++|+|+|.|.+|..+|+.|.+ .++|++..++.++++.+++.++++..+..|.+| .+-|.+. +.++|
T Consensus 227 ~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td--~~~L~ee~i~~~D 302 (461)
T 4g65_A 227 ELQRLEKPYRRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQRAEKLSEELENTIVFCGDAAD--QELLTEENIDQVD 302 (461)
T ss_dssp HTTGGGSCCCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTC--HHHHHHTTGGGCS
T ss_pred hhccccccccEEEEEcchHHHHHHHHHhhh--cCceEEEecCHHHHHHHHHHCCCceEEeccccc--hhhHhhcCchhhc
Confidence 333444567899999999999999999864 478999999999999999999999999999998 7777654 78999
Q ss_pred EEEEcCCCc-ccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 636 LVVSLLPYN-LHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 636 VVIs~lP~~-~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
++|.++... .+.-....|-+.|+.-+-+-...+....+ .++.|+-
T Consensus 303 ~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l---~~~~gid 348 (461)
T 4g65_A 303 VFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDL---VQGGVID 348 (461)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCHHHHHH---HCSSSSC
T ss_pred EEEEcccCcHHHHHHHHHHHHcCCccccccccccchhhh---hhccccc
Confidence 999999753 34444555567887655544333333333 4445554
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0002 Score=80.40 Aligned_cols=78 Identities=19% Similarity=0.234 Sum_probs=60.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhC-CCCeEEEEeCCHHHH----------HHHHHH-cCCeeEEEeecCCCCchHHHh
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRD-ENIHITLGSLLKEDI----------DKVTNE-FGRVEATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~-~~~~VtVadR~~ekA----------e~La~~-~~~v~~v~lDV~D~~~e~L~e 629 (1201)
.++|+|+|.| +|++|+.+++.|++. .+++|++.+|+.... ...... -.++..+..|+.| .+.+.+
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~ 85 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINN--PLDLRR 85 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTC--HHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCC--HHHHHH
Confidence 4578999999 799999999999984 378999999865411 001111 1256889999998 888988
Q ss_pred h-ccCCcEEEEcCC
Q psy12817 630 L-VRSADLVVSLLP 642 (1201)
Q Consensus 630 l-I~~~DVVIs~lP 642 (1201)
+ ..++|+||+|..
T Consensus 86 ~~~~~~D~vih~A~ 99 (362)
T 3sxp_A 86 LEKLHFDYLFHQAA 99 (362)
T ss_dssp HTTSCCSEEEECCC
T ss_pred hhccCCCEEEECCc
Confidence 8 789999999985
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00018 Score=82.28 Aligned_cols=97 Identities=16% Similarity=0.186 Sum_probs=66.5
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
..++|+|+|+|.+|+.++..+...+ .+|+++||+.++++.+.+.... . +.....+ .+.+.+.++++|+||+|++.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~G-a~V~v~dr~~~r~~~~~~~~~~-~-~~~~~~~--~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLG-AQVQIFDINVERLSYLETLFGS-R-VELLYSN--SAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHGG-G-SEEEECC--HHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHhhCc-e-eEeeeCC--HHHHHHHHcCCCEEEECCCc
Confidence 3489999999999999999998875 4999999999998887654421 1 1112223 45677888899999999964
Q ss_pred ccc------HHHHHHHHHcCCeEEEccC
Q psy12817 644 NLH------HHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 644 ~~h------~~VakacIeaGkh~VD~Sy 665 (1201)
... ..-+..+++.|..++|.+|
T Consensus 241 ~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 241 PGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp TTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 321 1112233445555666554
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00012 Score=79.17 Aligned_cols=72 Identities=22% Similarity=0.229 Sum_probs=61.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+||+|+|.| +|++|+.+++.|++. +.+|++.+|+..+.+ ..++.++..|++| .+.+.++++++|+||++..
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~-----~~~~~~~~~Dl~d--~~~~~~~~~~~D~vi~~Ag 73 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPM-AEILRLADLSPLDPA-----GPNEECVQCDLAD--ANAVNAMVAGCDGIVHLGG 73 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGG-EEEEEEEESSCCCCC-----CTTEEEEECCTTC--HHHHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhc-CCEEEEEecCCcccc-----CCCCEEEEcCCCC--HHHHHHHHcCCCEEEECCC
Confidence 367899999 799999999999986 478999999876543 2468899999998 8999999999999999974
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 74 ~ 74 (267)
T 3rft_A 74 I 74 (267)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00085 Score=79.70 Aligned_cols=120 Identities=13% Similarity=0.193 Sum_probs=83.3
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH-HcC--CeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTN-EFG--RVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~-~~~--~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+||+|||+|.||..++..|++. +++|++.+|+.++++++.+ ..+ ++.. ..+ .+++.+.++++|+||.|+|
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~~~~~~l~~~~~~g~gi~~----~~~--~~e~v~~l~~aDvVilaVp 75 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTVSKVDDFLANEAKGTKVLG----AHS--LEEMVSKLKKPRRIILLVK 75 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSTHHHHHHHHTTTTTSSCEE----CSS--HHHHHHHBCSSCEEEECSC
T ss_pred CeEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhccccCCCeEE----eCC--HHHHHhhccCCCEEEEeCC
Confidence 6899999999999999999986 4689999999999998876 321 2321 122 3333333358999999999
Q ss_pred Cccc-HHHHH---HHHHcCCeEEEccC-ChHHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 643 YNLH-HHVAE---FCIQHGKNLVTASY-LSPEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 643 ~~~h-~~Vak---acIeaGkh~VD~Sy-vs~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
...+ ..+++ ..++.|+.+||.+- ......++.+..++.|+.++ ++++..|
T Consensus 76 ~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v-~~pv~g~ 130 (482)
T 2pgd_A 76 AGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFV-GSGVSGG 130 (482)
T ss_dssp TTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE-EEEEESH
T ss_pred ChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEe-CCCCCCC
Confidence 7533 34443 23456888999864 44455667777777888876 3444333
|
| >1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00028 Score=80.37 Aligned_cols=100 Identities=16% Similarity=0.090 Sum_probs=68.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeC--CHHHHHHHHH------HcCC-ee----EEE-----eecCC-CCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSL--LKEDIDKVTN------EFGR-VE----ATL-----IDVNN-GGS 624 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR--~~ekAe~La~------~~~~-v~----~v~-----lDV~D-~~~ 624 (1201)
|.||+|+|+|++|+.+++.|.++++++|+ |.|+ +.+.+..+.+ .+++ ++ ... +.+.. .++
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~ 82 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 82 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCH
Confidence 46999999999999999999988889954 5664 6776666553 1211 10 011 11111 013
Q ss_pred hHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 625 e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+++.---.++|+|+.|+|...+.+.+..++++|+..|+.|
T Consensus 83 ~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iS 122 (335)
T 1u8f_O 83 SKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIIS 122 (335)
T ss_dssp GGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEES
T ss_pred HHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEec
Confidence 3221001479999999999999999999999998888876
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00029 Score=78.08 Aligned_cols=76 Identities=13% Similarity=0.225 Sum_probs=58.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH--Hc----CCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTN--EF----GRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~--~~----~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
++++|+|.| +|++|+.+++.|+++ +++|++..|+.+..+++.. .+ ++++.+..|+.| .+.+.++++++|+
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d~ 80 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLER-GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLAD--EGSFDEAIKGCTG 80 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTS--TTTTHHHHTTCSE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCC--HHHHHHHHcCCCE
Confidence 568999999 899999999999986 5789888888763322211 12 146788899998 7889999999999
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
||++..
T Consensus 81 Vih~A~ 86 (337)
T 2c29_D 81 VFHVAT 86 (337)
T ss_dssp EEECCC
T ss_pred EEEecc
Confidence 999873
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00033 Score=77.46 Aligned_cols=75 Identities=17% Similarity=0.251 Sum_probs=58.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhC-C-C---CeEEEEeCCH-----HHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRD-E-N---IHITLGSLLK-----EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~-~-~---~~VtVadR~~-----ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~ 634 (1201)
|||+|.| +|++|+.+++.|++. + + ++|++.+|+. +.++.+.. .+++..+..|+.| .+.+.+++.++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d--~~~~~~~~~~~ 77 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA-DPRLRFVHGDIRD--AGLLARELRGV 77 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTT-CTTEEEEECCTTC--HHHHHHHTTTC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhccc-CCCeEEEEcCCCC--HHHHHHHhcCC
Confidence 5899999 799999999999984 3 5 7899999853 22222111 2468889999998 88999999999
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||+|...
T Consensus 78 d~Vih~A~~ 86 (337)
T 1r6d_A 78 DAIVHFAAE 86 (337)
T ss_dssp CEEEECCSC
T ss_pred CEEEECCCc
Confidence 999999854
|
| >2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=7.1e-05 Score=80.30 Aligned_cols=92 Identities=15% Similarity=0.281 Sum_probs=66.2
Q ss_pred CCCeEEEEcCchhHHHHHHHH-HhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYL-HRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~L-a~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
..+||+|+|+|.+|+.+++++ ....+++ +.++|++++++.+... ++... . .+++.+++++.|+|+.|+
T Consensus 84 ~~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~---gv~V~--~-----~~dl~eli~~~D~ViIAv 153 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVG---GVPVY--N-----LDDLEQHVKDESVAILTV 153 (215)
T ss_dssp ---CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEET---TEEEE--E-----GGGHHHHCSSCCEEEECS
T ss_pred CCCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhc---CCeee--c-----hhhHHHHHHhCCEEEEec
Confidence 347899999999999999963 3344566 5688999987654333 33321 1 235888887779999999
Q ss_pred CCcccHHHHHHHHHcCCe-EEEccC
Q psy12817 642 PYNLHHHVAEFCIQHGKN-LVTASY 665 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh-~VD~Sy 665 (1201)
|...|.+++..|+++|++ +++.+.
T Consensus 154 Ps~~~~ei~~~l~~aGi~~Ilnf~P 178 (215)
T 2vt3_A 154 PAVAAQSITDRLVALGIKGILNFTP 178 (215)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CchhHHHHHHHHHHcCCCEEEEcCc
Confidence 998899999999999999 666653
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00085 Score=72.85 Aligned_cols=78 Identities=14% Similarity=0.247 Sum_probs=63.9
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
..+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ ..+..+.+|++| .+.++++++
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~ 105 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAI 105 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC--HHHHHHHHHHH
Confidence 34568999999 799999999999987 578999999998887766543 236778899998 888877765
Q ss_pred -----CCcEEEEcCC
Q psy12817 633 -----SADLVVSLLP 642 (1201)
Q Consensus 633 -----~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 106 ~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 106 RSQHSGVDICINNAG 120 (279)
T ss_dssp HHHHCCCSEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 6899999975
|
| >2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00035 Score=78.23 Aligned_cols=108 Identities=13% Similarity=0.159 Sum_probs=78.0
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--C-CcEEEE
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--S-ADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~-~DVVIs 639 (1201)
...+|+|+|+ |.+|+.+++.|.+. +++ .|+.-++.+.. ...-++.. . .+++++.+ + +|++|.
T Consensus 12 ~~~~vvV~Gasg~~G~~~~~~l~~~-g~~-~v~~VnP~~~g---~~i~G~~v-----y----~sl~el~~~~~~~DvaIi 77 (297)
T 2yv2_A 12 SETRVLVQGITGREGSFHAKAMLEY-GTK-VVAGVTPGKGG---SEVHGVPV-----Y----DSVKEALAEHPEINTSIV 77 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCE-EEEEECTTCTT---CEETTEEE-----E----SSHHHHHHHCTTCCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhC-CCc-EEEEeCCCCCC---ceECCEee-----e----CCHHHHhhcCCCCCEEEE
Confidence 3568888895 99999999999875 566 44444444210 01113332 1 23555555 4 999999
Q ss_pred cCCCcccHHHHHHHHHcCCe-EEEcc--CChHHHHHHHHHHHHcCCEEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKN-LVTAS--YLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh-~VD~S--yvs~e~~eLde~AkeAGVtil 685 (1201)
++|...+..+++.|+++|++ +|..+ +...+++++.+.|++.|+.++
T Consensus 78 ~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 78 FVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp CCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred ecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 99999999999999999999 66544 344567889999999999877
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00044 Score=73.14 Aligned_cols=77 Identities=21% Similarity=0.308 Sum_probs=66.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---CCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---SADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---~~DVVIs 639 (1201)
+.++|+|.| +|++|+.+++.|++. +.+|++.+|+.++++++.++.++++.+.+|++| .+.++++++ ..|+||+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~id~vi~ 82 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPVCVDLGD--WEATERALGSVGPVDLLVN 82 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHTTCCCCCEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCC--HHHHHHHHHHcCCCCEEEE
Confidence 457899999 699999999999987 578999999999888887776677888999998 888888876 4799999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 83 ~Ag~ 86 (244)
T 3d3w_A 83 NAAV 86 (244)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9753
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00021 Score=79.64 Aligned_cols=76 Identities=14% Similarity=0.303 Sum_probs=59.5
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH--HHHHHHHHH--cCCeeEEEeecCCCCchHHHhhcc--CCcEEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK--EDIDKVTNE--FGRVEATLIDVNNGGSDNLSGLVR--SADLVV 638 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~--ekAe~La~~--~~~v~~v~lDV~D~~~e~L~elI~--~~DVVI 638 (1201)
|||+|.| +|++|+.+++.|++.++++|++.+|+. +..+.+... .+++..+..|+.| .+.+.++++ ++|+||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~d~vi 78 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD--SAEITRIFEQYQPDAVM 78 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTC--HHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCC--HHHHHHHHhhcCCCEEE
Confidence 4799999 699999999999986568999998864 222222111 2368889999998 889999988 899999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 79 h~A~~ 83 (361)
T 1kew_A 79 HLAAE 83 (361)
T ss_dssp ECCSC
T ss_pred ECCCC
Confidence 99854
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00017 Score=80.18 Aligned_cols=79 Identities=15% Similarity=0.297 Sum_probs=59.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCC-CCeEEEEeCCHH--HHHHHHHH--cCCeeEEEeecCCCCchHHHhhccC--C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDE-NIHITLGSLLKE--DIDKVTNE--FGRVEATLIDVNNGGSDNLSGLVRS--A 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~-~~~VtVadR~~e--kAe~La~~--~~~v~~v~lDV~D~~~e~L~elI~~--~ 634 (1201)
..+|+|+|.| +|++|+.+++.|++.+ .++|++.+|... ..+.+... .++++.+..|+.| .+.+.+++++ +
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 99 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQN--GELLEHVIKERDV 99 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTC--HHHHHHHHHHHTC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCC--HHHHHHHHhhcCC
Confidence 3468999999 5999999999999864 467888877542 22222211 2478999999998 8899999987 9
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 100 d~Vih~A~~ 108 (346)
T 4egb_A 100 QVIVNFAAE 108 (346)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCcc
Confidence 999999854
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00024 Score=84.01 Aligned_cols=74 Identities=20% Similarity=0.296 Sum_probs=55.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHc-----------------CCeeEEEeecCCCCch
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEF-----------------GRVEATLIDVNNGGSD 625 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~-----------------~~v~~v~lDV~D~~~e 625 (1201)
+|+||.|||+|+||.+++..|++.+ +++|++.||++++++.+.+.. .++. ++ .
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~-----~t----~ 74 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLF-----FS----T 74 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEE-----EE----S
T ss_pred CccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEE-----EE----C
Confidence 3579999999999999999999864 689999999999988864321 0111 11 1
Q ss_pred HHHhhccCCcEEEEcCCCccc
Q psy12817 626 NLSGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 626 ~L~elI~~~DVVIs~lP~~~h 646 (1201)
++.+.++++|+||.|+|...+
T Consensus 75 ~~~e~~~~aDvViiaVptp~~ 95 (467)
T 2q3e_A 75 NIDDAIKEADLVFISVNTPTK 95 (467)
T ss_dssp CHHHHHHHCSEEEECCCCCBC
T ss_pred CHHHHHhcCCEEEEEcCCchh
Confidence 345567789999999986543
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00038 Score=73.43 Aligned_cols=77 Identities=19% Similarity=0.343 Sum_probs=64.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+||+|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++++++.+.+ .++.++.+|++| .++++++++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARD-GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK--AESVEEFSKKVLER 77 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHCC-HHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC--HHHHHHHHHHHHHh
Confidence 368899999 699999999999987 578999999999887766543 357788999998 888888876
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 78 ~g~id~li~~Ag~ 90 (235)
T 3l77_A 78 FGDVDVVVANAGL 90 (235)
T ss_dssp HSSCSEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 68999999753
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00065 Score=74.10 Aligned_cols=91 Identities=18% Similarity=0.265 Sum_probs=63.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-CCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-SADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-~~DVVIs~lP 642 (1201)
|+||+|||+|.||..++..|.+.+ ..+|++.||+.++++.+.+ . ++.... .. ++.+.++ ++|+||.|+|
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~-~-g~~~~~--~~-----~~~~~~~~~aDvVilavp 71 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-L-GIIDEG--TT-----SIAKVEDFSPDFVMLSSP 71 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-T-TSCSEE--ES-----CGGGGGGTCCSEEEECSC
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH-C-CCcccc--cC-----CHHHHhcCCCCEEEEcCC
Confidence 679999999999999999998764 2289999999998877543 3 322100 11 2445678 9999999999
Q ss_pred CcccHHHHHHH---HHcCCeEEEcc
Q psy12817 643 YNLHHHVAEFC---IQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~Vakac---IeaGkh~VD~S 664 (1201)
......+++.. ++.++.+++.+
T Consensus 72 ~~~~~~v~~~l~~~l~~~~iv~~~~ 96 (281)
T 2g5c_A 72 VRTFREIAKKLSYILSEDATVTDQG 96 (281)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred HHHHHHHHHHHHhhCCCCcEEEECC
Confidence 77655555432 23455555554
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00036 Score=82.93 Aligned_cols=78 Identities=17% Similarity=0.269 Sum_probs=56.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHc-----CCeeE-------EEeecCCCCchHHHhh
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEF-----GRVEA-------TLIDVNNGGSDNLSGL 630 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~-----~~v~~-------v~lDV~D~~~e~L~el 630 (1201)
+|+||.|||+|+||.+++..|++.+ +++|++.|+++++++.+.+.. ++... ..+.+++ ++.+.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~----~~~~~ 83 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSS----DIPKA 83 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEES----CHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEEC----CHHHH
Confidence 4679999999999999999999874 689999999999999887521 11000 0011111 34456
Q ss_pred ccCCcEEEEcCCCcc
Q psy12817 631 VRSADLVVSLLPYNL 645 (1201)
Q Consensus 631 I~~~DVVIs~lP~~~ 645 (1201)
++++|+||.|+|...
T Consensus 84 ~~~aDvvii~Vptp~ 98 (481)
T 2o3j_A 84 IAEADLIFISVNTPT 98 (481)
T ss_dssp HHHCSEEEECCCCCB
T ss_pred hhcCCEEEEecCCcc
Confidence 678999999998654
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00047 Score=74.28 Aligned_cols=78 Identities=19% Similarity=0.302 Sum_probs=66.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ +++..+.+|++| .+.++++++ +
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~ 82 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVRE-GATVAIADIDIERARQAAAEIGPAAYAVQMDVTR--QDSIDAAIAATVEHAGG 82 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHSSS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC--HHHHHHHHHHHHHHcCC
Confidence 4568899999 799999999999987 578999999999998887765 357889999998 888887776 7
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 83 id~lv~~Ag~ 92 (259)
T 4e6p_A 83 LDILVNNAAL 92 (259)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999999853
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00033 Score=76.95 Aligned_cols=87 Identities=24% Similarity=0.393 Sum_probs=62.6
Q ss_pred CCeEEEEcC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|+||+|||+ |.||+.++..|.+. +++|++.+|+.++++++.+ . ++. +.+ ..+.++++|+||.|+|.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~-~-g~~-----~~~-----~~~~~~~aDvVi~av~~ 77 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS-AHHLAAIEIAPEGRDRLQG-M-GIP-----LTD-----GDGWIDEADVVVLALPD 77 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSHHHHHHHHH-T-TCC-----CCC-----SSGGGGTCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHh-c-CCC-----cCC-----HHHHhcCCCEEEEcCCc
Confidence 579999999 99999999999886 4799999999999888765 3 332 222 23466789999999997
Q ss_pred cccHHHHHHHH---HcCCeEEEcc
Q psy12817 644 NLHHHVAEFCI---QHGKNLVTAS 664 (1201)
Q Consensus 644 ~~h~~VakacI---eaGkh~VD~S 664 (1201)
.....+++... +.++.++|.|
T Consensus 78 ~~~~~v~~~l~~~l~~~~ivv~~s 101 (286)
T 3c24_A 78 NIIEKVAEDIVPRVRPGTIVLILD 101 (286)
T ss_dssp HHHHHHHHHHGGGSCTTCEEEESC
T ss_pred hHHHHHHHHHHHhCCCCCEEEECC
Confidence 65444444322 2344555543
|
| >2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.42 E-value=3.9e-05 Score=84.14 Aligned_cols=87 Identities=20% Similarity=0.196 Sum_probs=57.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|+||+|||+|.||..++..|.+. ++| .+.+|+.++++++++.++ + ..+ ++.++++++|+||.|+|.
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~~~~~~~~~~~~~g-~------~~~----~~~~~~~~~DvVilav~~ 68 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR--YEIGYILSRSIDRARNLAEVYG-G------KAA----TLEKHPELNGVVFVIVPD 68 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC------CCCEECSSHHHHHHHHHHTC-C------CCC----SSCCCCC---CEEECSCT
T ss_pred CceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeCCHHHHHHHHHHcC-C------ccC----CHHHHHhcCCEEEEeCCh
Confidence 57899999999999999999875 678 589999999998887663 2 111 234456789999999998
Q ss_pred cccHHHHHHHHHcCCeEEEcc
Q psy12817 644 NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~S 664 (1201)
..+..+++.....++-+++.+
T Consensus 69 ~~~~~v~~~l~~~~~ivi~~s 89 (276)
T 2i76_A 69 RYIKTVANHLNLGDAVLVHCS 89 (276)
T ss_dssp TTHHHHHTTTCCSSCCEEECC
T ss_pred HHHHHHHHHhccCCCEEEECC
Confidence 877666643323444555554
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00023 Score=71.33 Aligned_cols=103 Identities=16% Similarity=0.201 Sum_probs=74.4
Q ss_pred CCeEEEEcC----chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGA----GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGA----G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++|+|+|+ |.+|..++++|.+. +++| ++.+++. ....++. +. .++.++....|+|+.+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~-G~~v--~~Vnp~~-----~~i~G~~-----~y----~sl~~l~~~vDlvvi~ 84 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEH-GYDV--YPVNPKY-----EEVLGRK-----CY----PSVLDIPDKIEVVDLF 84 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT-TCEE--EEECTTC-----SEETTEE-----CB----SSGGGCSSCCSEEEEC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHC-CCEE--EEECCCC-----CeECCee-----cc----CCHHHcCCCCCEEEEE
Confidence 579999998 79999999999886 4564 4445442 1122332 11 2355555689999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil 685 (1201)
+|...+..+++.|+++|+..+-...-. ...++.+.|+++|+.++
T Consensus 85 vp~~~~~~vv~~~~~~gi~~i~~~~g~-~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 85 VKPKLTMEYVEQAIKKGAKVVWFQYNT-YNREASKKADEAGLIIV 128 (144)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECTTC-CCHHHHHHHHHTTCEEE
T ss_pred eCHHHHHHHHHHHHHcCCCEEEECCCc-hHHHHHHHHHHcCCEEE
Confidence 999999999999999999866443211 14567778999999987
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0004 Score=84.38 Aligned_cols=101 Identities=20% Similarity=0.200 Sum_probs=74.7
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHH----HcCCeeEEEee
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTN----EFGRVEATLID 618 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~----~~~~v~~v~lD 618 (1201)
..+..||+|+|+|.+|..++++|++.+--+++++|.+. .|++.+++ ..|.++....+
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~ 402 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK 402 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence 35678999999999999999999998766899999864 34544443 34666554433
Q ss_pred --c--------------CCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEcc
Q psy12817 619 --V--------------NNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 619 --V--------------~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~S 664 (1201)
+ .+ .+.+.++++++|+||+|+-. .....+.++|.++++.+|+.+
T Consensus 403 ~~Ipm~gh~v~~e~~~~l~--~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aa 463 (615)
T 4gsl_A 403 LSIPMIGHKLVNEEAQHKD--FDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA 463 (615)
T ss_dssp CCCCCTTCCCSCHHHHHHH--HHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEE
T ss_pred ccccccCccccchhhhcCC--HHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 1 01 24567888999999999943 345678889999999988753
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00018 Score=85.53 Aligned_cols=127 Identities=15% Similarity=0.146 Sum_probs=78.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHH----HHHHHHHHcCCe-------e--------EEEeecCCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKE----DIDKVTNEFGRV-------E--------ATLIDVNNG 622 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~e----kAe~La~~~~~v-------~--------~v~lDV~D~ 622 (1201)
.+++||.|||+|+||.+++..|++.+++ +|++.|++++ +++.+.+....+ . .-.+-+++
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~tt- 94 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTP- 94 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEES-
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeC-
Confidence 4578999999999999999999987567 9999999999 888887532111 0 00011222
Q ss_pred CchHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHH
Q psy12817 623 GSDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMEC 702 (1201)
Q Consensus 623 ~~e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~ 702 (1201)
. .+.++++|+||.|+|...... +....|.+++....+.+.+. -+.|..++.+.++.||...-++..+
T Consensus 95 ---d-~ea~~~aDvViiaVptp~~~~--------~~~~~dl~~v~~~~~~i~~~-l~~g~iVV~~STv~pgtt~~v~~~i 161 (478)
T 3g79_A 95 ---D-FSRISELDAVTLAIQTPFANP--------KDLEPDFSALIDGIRNVGKY-LKPGMLVVLESTITPGTTEGMAKQI 161 (478)
T ss_dssp ---C-GGGGGGCSEEEECCCCCCCSS--------CCSSCCCHHHHHHHHHHHHH-CCTTCEEEECSCCCTTTTTTHHHHH
T ss_pred ---c-HHHHhcCCEEEEecCCchhcc--------CCccccHHHHHHHHHHHHhh-cCCCcEEEEeCCCChHHHHHHHHHH
Confidence 1 346788999999998764210 00012333332222333221 2346667777777777665555444
Q ss_pred H
Q psy12817 703 I 703 (1201)
Q Consensus 703 i 703 (1201)
+
T Consensus 162 l 162 (478)
T 3g79_A 162 L 162 (478)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00043 Score=80.35 Aligned_cols=115 Identities=17% Similarity=0.250 Sum_probs=76.3
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCee-----------EEEeecCCCCchHHHhhccCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVE-----------ATLIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~-----------~v~lDV~D~~~e~L~elI~~~ 634 (1201)
|||+|||+|+||.+++..|++ +++|++.||++++++.+.+....+. ...+.+++ +..+.++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~----~~~~~~~~a 74 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATL----DSKAAYKEA 74 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEES----CHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeC----CHHHHhcCC
Confidence 589999999999999999997 5899999999999998875421110 00011111 244556789
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHH
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhm 697 (1201)
|+||.|+|...+. +.+..|++++...++.+.+ -..|..++......||...-
T Consensus 75 Dvviiavpt~~~~---------~~~~~dl~~v~~v~~~i~~--l~~~~iVV~~ST~~~g~~~~ 126 (402)
T 1dlj_A 75 ELVIIATPTNYNS---------RINYFDTQHVETVIKEVLS--VNSHATLIIKSTIPIGFITE 126 (402)
T ss_dssp SEEEECCCCCEET---------TTTEECCHHHHHHHHHHHH--HCSSCEEEECSCCCTTHHHH
T ss_pred CEEEEecCCCccc---------CCCCccHHHHHHHHHHHHh--hCCCCEEEEeCCCCccHHHH
Confidence 9999999876531 2234555555444555544 34567777767777876543
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00051 Score=74.14 Aligned_cols=102 Identities=19% Similarity=0.186 Sum_probs=67.4
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeC--CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSL--LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR--~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|||.|||+|.||..++..|.+. +++|++.+| +.+.++++.+. ++. .+ . .++++++|+||.|+|.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~-g~~V~~~~~~~~~~~~~~~~~~--g~~------~~--~---~~~~~~aDvvi~~v~~ 66 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR-GVEVVTSLEGRSPSTIERARTV--GVT------ET--S---EEDVYSCPVVISAVTP 66 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEECCTTCCHHHHHHHHHH--TCE------EC--C---HHHHHTSSEEEECSCG
T ss_pred CeEEEEechHHHHHHHHHHHHC-CCeEEEeCCccCHHHHHHHHHC--CCc------CC--H---HHHHhcCCEEEEECCC
Confidence 4899999999999999999986 578998888 77777776653 333 22 2 3456789999999998
Q ss_pred cccHHHHHHHHHcCC-eEEEccCChH-HHHHHHHHHHHcC
Q psy12817 644 NLHHHVAEFCIQHGK-NLVTASYLSP-EMMALHERAASAG 681 (1201)
Q Consensus 644 ~~h~~VakacIeaGk-h~VD~Syvs~-e~~eLde~AkeAG 681 (1201)
..+...+......-. .+++.+-..+ ..+++.+..++.|
T Consensus 67 ~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~l~~~~~~~g 106 (264)
T 1i36_A 67 GVALGAARRAGRHVRGIYVDINNISPETVRMASSLIEKGG 106 (264)
T ss_dssp GGHHHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHCSSSE
T ss_pred HHHHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHHHhhCC
Confidence 766555544333212 4555554433 2344544444433
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00052 Score=74.68 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=66.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+..+++.++.+|++| .+.++++++ ..|
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD 84 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFILCDVTQ--EDDVKTLVSETIRRFGRLD 84 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCC--HHHHHHHHHHHHHHcCCCC
Confidence 458899999 799999999999987 578999999999998888777678889999998 888887765 689
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
+||++..
T Consensus 85 ~lv~nAg 91 (270)
T 1yde_A 85 CVVNNAG 91 (270)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999975
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00023 Score=78.41 Aligned_cols=76 Identities=14% Similarity=0.134 Sum_probs=59.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHH--HHHHHH--cCCeeEEEeecCCCCchHHHhhccC--CcEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDI--DKVTNE--FGRVEATLIDVNNGGSDNLSGLVRS--ADLV 637 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekA--e~La~~--~~~v~~v~lDV~D~~~e~L~elI~~--~DVV 637 (1201)
+|+|+|.| +|++|+.+++.|++. +++|++.+|+.++. +.+... .+++..+..|+.| .+.+.+++++ .|+|
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~d~v 79 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEK-GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLE--FSNIIRTIEKVQPDEV 79 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTC--HHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCCcccccccHhhccccCceeEEECCCCC--HHHHHHHHHhcCCCEE
Confidence 47999999 599999999999987 57999999986543 222221 1357888899998 8889888885 5999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
|++...
T Consensus 80 ih~A~~ 85 (345)
T 2z1m_A 80 YNLAAQ 85 (345)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999864
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=97.39 E-value=7.8e-05 Score=80.17 Aligned_cols=71 Identities=18% Similarity=0.214 Sum_probs=59.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|++|+|.| +|++|+.+++.|.+. +++|++.+|+.++.. .+++..+..|+.| .+.+.++++++|+||++...
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~-----~~~~~~~~~Dl~d--~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTL-AHEVRLSDIVDLGAA-----EAHEEIVACDLAD--AQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGT-EEEEEECCSSCCCCC-----CTTEEECCCCTTC--HHHHHHHHTTCSEEEECCSC
T ss_pred CceEEEECCCCHHHHHHHHHHHhC-CCEEEEEeCCCcccc-----CCCccEEEccCCC--HHHHHHHHcCCCEEEECCcC
Confidence 57999999 599999999999987 478999999865321 1357788899998 88999999999999999854
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00029 Score=77.73 Aligned_cols=79 Identities=14% Similarity=0.071 Sum_probs=59.1
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHH--HHHHH--HcCCeeEEEeecCCCCchHHHhhccC--C
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDI--DKVTN--EFGRVEATLIDVNNGGSDNLSGLVRS--A 634 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekA--e~La~--~~~~v~~v~lDV~D~~~e~L~elI~~--~ 634 (1201)
...+++|+|.| +|++|+.+++.|.+. +.+|++.+|+.++. ..+.. ..+++..+..|+.| .+.+.+++++ .
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 87 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD--ACSVQRAVIKAQP 87 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC--HHHHHHHHHHHCC
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCccccccchhhccccCceEEEECCCCC--HHHHHHHHHHcCC
Confidence 45689999999 799999999999987 57999999976531 11211 11367888999998 8889988885 6
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||+|...
T Consensus 88 d~Vih~A~~ 96 (335)
T 1rpn_A 88 QEVYNLAAQ 96 (335)
T ss_dssp SEEEECCSC
T ss_pred CEEEECccc
Confidence 999999853
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0003 Score=74.99 Aligned_cols=77 Identities=12% Similarity=0.078 Sum_probs=63.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
++++|+|.| +|++|+.+++.|++..+.+|++.+|+.++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD--LQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCC--HHHHHHHHHHHHHhc
Confidence 468999999 7999999999999823578999999988877665443 357889999998 888888776
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 81 g~id~li~~Ag 91 (276)
T 1wma_A 81 GGLDVLVNNAG 91 (276)
T ss_dssp SSEEEEEECCC
T ss_pred CCCCEEEECCc
Confidence 7899999974
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00023 Score=78.03 Aligned_cols=66 Identities=15% Similarity=0.313 Sum_probs=40.8
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~l 641 (1201)
+|+|+|.| +|++|+.+++.|++. +++|++.+|+.++ ++ .+..|+.| .+.+.+++++ +|+||+|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~--------~~--~~~~Dl~d--~~~~~~~~~~~~~d~vih~A 68 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQN-NWHAVGCGFRRAR--------PK--FEQVNLLD--SNAVHHIIHDFQPHVIVHCA 68 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEC------------------------------CHHHHHHHCCSEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhC-CCeEEEEccCCCC--------CC--eEEecCCC--HHHHHHHHHhhCCCEEEECC
Confidence 47999999 599999999999987 4889999987654 12 56789887 7778888874 89999998
Q ss_pred CC
Q psy12817 642 PY 643 (1201)
Q Consensus 642 P~ 643 (1201)
..
T Consensus 69 ~~ 70 (315)
T 2ydy_A 69 AE 70 (315)
T ss_dssp --
T ss_pred cc
Confidence 53
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00047 Score=73.06 Aligned_cols=75 Identities=13% Similarity=0.180 Sum_probs=63.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.. .++..+.+|++| .+.++++++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLAR-GDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD--EGDVNAAIAATMEQF 78 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHh
Confidence 47899999 799999999999987 478999999998887766543 247788999998 888888776
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 79 ~~id~li~~Ag 89 (250)
T 2cfc_A 79 GAIDVLVNNAG 89 (250)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7899999985
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00038 Score=73.44 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=63.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhccCC----cEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVRSA----DLVV 638 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~~~----DVVI 638 (1201)
||+|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++..+.+|++| .+.+++++++. |+||
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~d~lv 77 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAE-GKATYLTGRSESKLSTVTNCLSNNVGYRARDLAS--HQEVEQLFEQLDSIPSTVV 77 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTC--HHHHHHHHHSCSSCCSEEE
T ss_pred CCEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCC--HHHHHHHHHHHhhcCCEEE
Confidence 67899999 699999999999987 478999999999999888766 357788999998 88888887664 8999
Q ss_pred EcCC
Q psy12817 639 SLLP 642 (1201)
Q Consensus 639 s~lP 642 (1201)
++..
T Consensus 78 ~~Ag 81 (230)
T 3guy_A 78 HSAG 81 (230)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 9975
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00026 Score=83.80 Aligned_cols=76 Identities=21% Similarity=0.334 Sum_probs=67.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~ 643 (1201)
.|||+|+|+|.+|+.+++.|.+. +++|+|.|+++++++++...+ ++..+..|.++ ++.|+++ ++++|++|.+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~~~~~~~~~~~-~~~~i~Gd~~~--~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE-NNDITIVDKDGDRLRELQDKY-DLRVVNGHASH--PDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST-TEEEEEEESCHHHHHHHHHHS-SCEEEESCTTC--HHHHHHHTTTTCSEEEECCSC
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHhc-CcEEEEEcCCC--HHHHHhcCCCcCCEEEEEcCC
Confidence 37899999999999999999865 678999999999999998887 68889999998 8888866 7889999999875
Q ss_pred c
Q psy12817 644 N 644 (1201)
Q Consensus 644 ~ 644 (1201)
.
T Consensus 79 D 79 (461)
T 4g65_A 79 D 79 (461)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00054 Score=73.78 Aligned_cols=78 Identities=13% Similarity=0.161 Sum_probs=65.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+. ++..+.+|++| .+.++++++ +
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKA-GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTK--RASVDAAMQKAIDALGG 86 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTC--HHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC--HHHHHHHHHHHHHHcCC
Confidence 3458999999 799999999999987 5789999999998888776553 57788999998 888888776 7
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 87 iD~lv~~Ag~ 96 (263)
T 3ak4_A 87 FDLLCANAGV 96 (263)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999999853
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00095 Score=75.02 Aligned_cols=92 Identities=17% Similarity=0.262 Sum_probs=66.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCC--eEEEEeCCHHHHHHHHHHcCCee-EEEeecCCCCchHHHh-hccCCcEEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENI--HITLGSLLKEDIDKVTNEFGRVE-ATLIDVNNGGSDNLSG-LVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~--~VtVadR~~ekAe~La~~~~~v~-~v~lDV~D~~~e~L~e-lI~~~DVVIs 639 (1201)
.++||+|||+|.||..++..|.+.+ + +|++.||++++++.+.+ . ++. .. . ..+.+ +++++|+||.
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G-~~~~V~~~dr~~~~~~~a~~-~-G~~~~~----~----~~~~~~~~~~aDvVil 100 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSG-FKGKIYGYDINPESISKAVD-L-GIIDEG----T----TSIAKVEDFSPDFVML 100 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTT-CCSEEEEECSCHHHHHHHHH-T-TSCSEE----E----SCTTGGGGGCCSEEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHH-C-CCcchh----c----CCHHHHhhccCCEEEE
Confidence 4589999999999999999999874 5 89999999998877554 3 221 11 1 12455 6789999999
Q ss_pred cCCCcccHHHHHHH---HHcCCeEEEccCC
Q psy12817 640 LLPYNLHHHVAEFC---IQHGKNLVTASYL 666 (1201)
Q Consensus 640 ~lP~~~h~~Vakac---IeaGkh~VD~Syv 666 (1201)
|+|......+++.. ++.++-++|.+-+
T Consensus 101 avp~~~~~~vl~~l~~~l~~~~iv~d~~Sv 130 (314)
T 3ggo_A 101 SSPVRTFREIAKKLSYILSEDATVTDQGSV 130 (314)
T ss_dssp CSCGGGHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred eCCHHHHHHHHHHHhhccCCCcEEEECCCC
Confidence 99987655555433 3456667776543
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00031 Score=78.43 Aligned_cols=77 Identities=14% Similarity=0.254 Sum_probs=62.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH---cCCeeEEEeecCCCCchHHHhhccC--CcEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE---FGRVEATLIDVNNGGSDNLSGLVRS--ADLV 637 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~---~~~v~~v~lDV~D~~~e~L~elI~~--~DVV 637 (1201)
++|+|+|.| +|++|+.+++.|.+. +++|++.+|+.++.+.+... .+++..+..|+.| .+.+.+++++ +|+|
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~d~v 84 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD--QNKLLESIREFQPEIV 84 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC--HHHHHHHHHHHCCSEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC-CCeEEEEeCCCcccchhhHhhccCCceEEEEccccC--HHHHHHHHHhcCCCEE
Confidence 458999999 799999999999987 57999999987654433332 2368889999998 8889888886 8999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
|++...
T Consensus 85 ih~A~~ 90 (357)
T 1rkx_A 85 FHMAAQ 90 (357)
T ss_dssp EECCSC
T ss_pred EECCCC
Confidence 999863
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00067 Score=77.65 Aligned_cols=99 Identities=17% Similarity=0.257 Sum_probs=72.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHH----HHHcCCee--EEEe
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKV----TNEFGRVE--ATLI 617 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~L----a~~~~~v~--~v~l 617 (1201)
.+..+|+|+|+|.+|..++.+|++.+--+++++|++. .|++.+ .+..|.++ ++..
T Consensus 116 L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 195 (353)
T 3h5n_A 116 LKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL 195 (353)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred HhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence 4568999999999999999999998766899999863 234333 33346544 4444
Q ss_pred ecCCCCchHHHhhccCCcEEEEcCCCc--ccHHHHHHHHHcCCeEEEcc
Q psy12817 618 DVNNGGSDNLSGLVRSADLVVSLLPYN--LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 618 DV~D~~~e~L~elI~~~DVVIs~lP~~--~h~~VakacIeaGkh~VD~S 664 (1201)
++.+ ...+.+ ++++|+||+|+-.. ....+.++|.+.|+.+|..+
T Consensus 196 ~i~~--~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~ 241 (353)
T 3h5n_A 196 NIND--YTDLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAG 241 (353)
T ss_dssp CCCS--GGGGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEE
T ss_pred ccCc--hhhhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEE
Confidence 4543 333666 89999999998433 33556789999999998864
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00068 Score=72.24 Aligned_cols=78 Identities=18% Similarity=0.314 Sum_probs=64.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEA-GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTN--TESVQNAVRSVHEQ 87 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHH
Confidence 4468899999 799999999999987 578999999988776655432 357889999998 888887775
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 88 ~~~id~vi~~Ag~ 100 (260)
T 3awd_A 88 EGRVDILVACAGI 100 (260)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 68999999853
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00036 Score=79.93 Aligned_cols=77 Identities=16% Similarity=0.206 Sum_probs=61.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.+++.+...+ .+|+++||+.++++.+.+.+ +.. +..|..+ .+.+.++++++|+||+|++
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d~~~~~~~~~~~~~-g~~-~~~~~~~--~~~l~~~~~~~DvVi~~~g 238 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMG-AQVTILDVNHKRLQYLDDVF-GGR-VITLTAT--EANIKKSVQHADLLIGAVL 238 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHT-TTS-EEEEECC--HHHHHHHHHHCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHhc-Cce-EEEecCC--HHHHHHHHhCCCEEEECCC
Confidence 34589999999999999999998874 69999999999888776555 233 4456666 6788888999999999997
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 239 ~~ 240 (369)
T 2eez_A 239 VP 240 (369)
T ss_dssp --
T ss_pred CC
Confidence 43
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00025 Score=72.88 Aligned_cols=72 Identities=19% Similarity=0.272 Sum_probs=62.7
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---CCcEEEEcC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---SADLVVSLL 641 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---~~DVVIs~l 641 (1201)
|+|+|.| +|++|+.+++.|+++ +|++.+|+.++++++.+..+. ..+.+|++| .+.+.++++ +.|+||++.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~--~~~~~~~~~~~~~id~vi~~a 74 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVGA-RALPADLAD--ELEAKALLEEAGPLDLLVHAV 74 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHTC-EECCCCTTS--HHHHHHHHHHHCSEEEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhccC-cEEEeeCCC--HHHHHHHHHhcCCCCEEEECC
Confidence 5799999 799999999999986 899999999998888776644 778899998 888998888 899999998
Q ss_pred CC
Q psy12817 642 PY 643 (1201)
Q Consensus 642 P~ 643 (1201)
..
T Consensus 75 g~ 76 (207)
T 2yut_A 75 GK 76 (207)
T ss_dssp CC
T ss_pred Cc
Confidence 53
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00033 Score=73.70 Aligned_cols=76 Identities=20% Similarity=0.225 Sum_probs=63.5
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHH-cCCeeEEEeecCCCCchHHHhhcc---------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNE-FGRVEATLIDVNNGGSDNLSGLVR--------- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~-~~~v~~v~lDV~D~~~e~L~elI~--------- 632 (1201)
+++|+|.| +|.+|+.+++.|++.+. .+|++.+|+.++++++.+. ..++.++.+|++| .+.+.++++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC--DKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC--HHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCC--HHHHHHHHHHHHHhcCCC
Confidence 57899999 79999999999998754 7899999999887776543 2357889999998 788887776
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 81 ~id~li~~Ag 90 (250)
T 1yo6_A 81 GLSLLINNAG 90 (250)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCc
Confidence 8999999975
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00033 Score=76.81 Aligned_cols=72 Identities=24% Similarity=0.318 Sum_probs=58.9
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVS 639 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs 639 (1201)
.++++|+|.| +|++|+.+++.|++. +++|++.+|+.+. +. + ++..+..|+.| .+.+.+++++ +|+||+
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~-~~----l-~~~~~~~Dl~d--~~~~~~~~~~~~~d~vih 80 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQ-NVEVFGTSRNNEA-KL----P-NVEMISLDIMD--SQRVKKVISDIKPDYIFH 80 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCTTC-CC----T-TEEEEECCTTC--HHHHHHHHHHHCCSEEEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCcc-cc----c-eeeEEECCCCC--HHHHHHHHHhcCCCEEEE
Confidence 4579999999 799999999999987 5799999998764 22 2 67888999998 8889998876 899999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
|...
T Consensus 81 ~A~~ 84 (321)
T 2pk3_A 81 LAAK 84 (321)
T ss_dssp CCSC
T ss_pred cCcc
Confidence 9854
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00041 Score=78.74 Aligned_cols=75 Identities=13% Similarity=0.281 Sum_probs=54.2
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEE-EeecCCCCchHHHhhccCCcEEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEAT-LIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v-~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
+||+|||+|.||.+++..|++. +++|++.+|+.++++.+.+.. ++.... .+.+. .++.+.++++|+||
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~aDvVi 90 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKK-CREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFT----SDVEKAYNGAEIIL 90 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTT-EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEE----SCHHHHHTTCSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCcccccccccccccceeee----CCHHHHHcCCCEEE
Confidence 3999999999999999999875 578999999999998887642 111000 00111 23556677899999
Q ss_pred EcCCCcc
Q psy12817 639 SLLPYNL 645 (1201)
Q Consensus 639 s~lP~~~ 645 (1201)
.|+|...
T Consensus 91 lav~~~~ 97 (366)
T 1evy_A 91 FVIPTQF 97 (366)
T ss_dssp ECCCHHH
T ss_pred ECCChHH
Confidence 9999643
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0006 Score=72.35 Aligned_cols=78 Identities=14% Similarity=0.262 Sum_probs=64.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|++|+.+++.|++. +.+|++.+|+.++++++.+.+ +++..+.+|++| .+.++++++
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFAISK 85 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 3458999999 699999999999987 578999999998877665443 357788899998 888888776
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 86 ~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 86 LGKVDILVNNAGG 98 (255)
T ss_dssp HSSCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 79999999853
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00027 Score=86.61 Aligned_cols=77 Identities=21% Similarity=0.327 Sum_probs=62.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchH-HHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDN-LSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~-L~elI~~~DVVIs~l 641 (1201)
++|+|+|.| +|++|+.+++.|++.++++|++.+|+.++.+.+.. .++++.+..|+.| .++ +.++++++|+||++.
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~-~~~v~~v~~Dl~d--~~~~~~~~~~~~D~Vih~A 390 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN-HPHFHFVEGDISI--HSEWIEYHVKKCDVVLPLV 390 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT-CTTEEEEECCTTT--CHHHHHHHHHHCSEEEECC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc-CCceEEEECCCCC--cHHHHHHhhcCCCEEEECc
Confidence 568999999 79999999999998767899999998776544322 2468889999997 554 777888999999997
Q ss_pred CC
Q psy12817 642 PY 643 (1201)
Q Consensus 642 P~ 643 (1201)
..
T Consensus 391 a~ 392 (660)
T 1z7e_A 391 AI 392 (660)
T ss_dssp CC
T ss_pred ee
Confidence 53
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00024 Score=80.59 Aligned_cols=90 Identities=17% Similarity=0.237 Sum_probs=65.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.++++|+|||+|.||..++..|.+.+ ++|++++|+.++..+.+... ++.. .+ +.++++++|+||.|+|
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G-~~V~~~~~~~~~~~~~a~~~-G~~~-----~~-----~~e~~~~aDvVilavp 81 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSG-VDVTVGLRSGSATVAKAEAH-GLKV-----AD-----VKTAVAAADVVMILTP 81 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHT-TCEE-----EC-----HHHHHHTCSEEEECSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCc-CEEEEEECChHHHHHHHHHC-CCEE-----cc-----HHHHHhcCCEEEEeCC
Confidence 44689999999999999999998864 78999999987655555554 4432 12 3456678999999999
Q ss_pred CcccHHHHH-H---HHHcCCeEEEcc
Q psy12817 643 YNLHHHVAE-F---CIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~Vak-a---cIeaGkh~VD~S 664 (1201)
...+..+++ . .++.|+.++|.+
T Consensus 82 ~~~~~~v~~~~i~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 82 DEFQGRLYKEEIEPNLKKGATLAFAH 107 (338)
T ss_dssp HHHHHHHHHHHTGGGCCTTCEEEESC
T ss_pred cHHHHHHHHHHHHhhCCCCCEEEEcC
Confidence 877666665 2 233456666653
|
| >2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00011 Score=78.54 Aligned_cols=92 Identities=13% Similarity=0.192 Sum_probs=69.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-CCcEEEEcC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-SADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-~~DVVIs~l 641 (1201)
..+||+|+|+|.+|+.+++++....+++ |.++|.+++++.+... ++... . .+++.++++ +.|+|+.|+
T Consensus 79 ~~~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~g~~i~---gv~V~--~-----~~dl~ell~~~ID~ViIA~ 148 (211)
T 2dt5_A 79 RKWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGRPVR---GGVIE--H-----VDLLPQRVPGRIEIALLTV 148 (211)
T ss_dssp SCEEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEET---TEEEE--E-----GGGHHHHSTTTCCEEEECS
T ss_pred CCCEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHHhhhhc---CCeee--c-----HHhHHHHHHcCCCEEEEeC
Confidence 4579999999999999999743322666 5678999887654332 33322 2 235777776 599999999
Q ss_pred CCcccHHHHHHHHHcCCe-EEEccC
Q psy12817 642 PYNLHHHVAEFCIQHGKN-LVTASY 665 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh-~VD~Sy 665 (1201)
|...|.+++..|+++|+| +++.+.
T Consensus 149 Ps~~~~ei~~~l~~aGi~~Ilnf~P 173 (211)
T 2dt5_A 149 PREAAQKAADLLVAAGIKGILNFAP 173 (211)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CchhHHHHHHHHHHcCCCEEEECCc
Confidence 999999999999999998 666553
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00037 Score=77.48 Aligned_cols=83 Identities=16% Similarity=0.117 Sum_probs=58.8
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeC--CHHHHHHHHHHcC----CeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSL--LKEDIDKVTNEFG----RVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR--~~ekAe~La~~~~----~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
|||+|||+|.||..++..|.+. +++|++.+| +.++++.+.+... +.....+.+.+ .+++.+.++++|+||.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~D~vi~ 77 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN-GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFW--PEQLEKCLENAEVVLL 77 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH-CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEEC--GGGHHHHHTTCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEec--HHhHHHHHhcCCEEEE
Confidence 5899999999999999999876 468999999 9998888776421 11000001221 2256667789999999
Q ss_pred cCCCcccHHHHH
Q psy12817 640 LLPYNLHHHVAE 651 (1201)
Q Consensus 640 ~lP~~~h~~Vak 651 (1201)
|+|......+++
T Consensus 78 ~v~~~~~~~v~~ 89 (335)
T 1txg_A 78 GVSTDGVLPVMS 89 (335)
T ss_dssp CSCGGGHHHHHH
T ss_pred cCChHHHHHHHH
Confidence 999775544443
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00057 Score=82.97 Aligned_cols=100 Identities=21% Similarity=0.213 Sum_probs=73.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC-------------------HHHHHHHHHH----cCCeeEEEee
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL-------------------KEDIDKVTNE----FGRVEATLID 618 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~-------------------~ekAe~La~~----~~~v~~v~lD 618 (1201)
..+..||+|+|+|.+|.+++++|++.+--+++++|.+ ..|++.+++. .|.++....+
T Consensus 324 kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~ 403 (598)
T 3vh1_A 324 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK 403 (598)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEe
Confidence 3457899999999999999999999876689999765 1355444433 3665544333
Q ss_pred --c--------------CCCCchHHHhhccCCcEEEEcCCCcc-cHHHHHHHHHcCCeEEEc
Q psy12817 619 --V--------------NNGGSDNLSGLVRSADLVVSLLPYNL-HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 619 --V--------------~D~~~e~L~elI~~~DVVIs~lP~~~-h~~VakacIeaGkh~VD~ 663 (1201)
+ .+ .+.+.++++++|+||+|+...- ...+.++|.++++.+++.
T Consensus 404 ~~I~~pgh~i~~~~~~~l~--~~~l~~li~~~DvVvdatDn~~tR~lin~~c~~~~~plI~a 463 (598)
T 3vh1_A 404 LSIPMIGHKLVNEEAQHKD--FDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINA 463 (598)
T ss_dssp CCCCCSSCCCCSHHHHHHH--HHHHHHHHHHCSEEEECCSBGGGTHHHHHHHHHTTCEEEEE
T ss_pred ccccccCcccccccccccC--HHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 1 01 3567788999999999996543 466788898999888875
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00042 Score=81.77 Aligned_cols=121 Identities=14% Similarity=0.157 Sum_probs=80.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCee--------EEEeecCCCCchHHHhhc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVE--------ATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~--------~v~lDV~D~~~e~L~elI 631 (1201)
..||.|||+|+||.+++..|++. +++|++.||++++++.+.+.. |+.. .-.+.++ .++.+.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t----td~~ea~ 82 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT----TDLAEGV 82 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE----SCHHHHH
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE----CCHHHHH
Confidence 47999999999999999999987 589999999999999887642 1100 0001112 2466778
Q ss_pred cCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHH
Q psy12817 632 RSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAM 700 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~ 700 (1201)
+++|+||.|+|..... +-...|++|+....+.+.+ .-+.|..++...++.||-..-++.
T Consensus 83 ~~aDvvii~Vptp~~~---------~~~~~Dl~~v~~v~~~i~~-~l~~g~iVV~~STv~pgtt~~l~~ 141 (446)
T 4a7p_A 83 KDADAVFIAVGTPSRR---------GDGHADLSYVFAAAREIAE-NLTKPSVIVTKSTVPVGTGDEVER 141 (446)
T ss_dssp TTCSEEEECCCCCBCT---------TTCCBCTHHHHHHHHHHHH-SCCSCCEEEECSCCCTTHHHHHHH
T ss_pred hcCCEEEEEcCCCCcc---------ccCCccHHHHHHHHHHHHH-hcCCCCEEEEeCCCCchHHHHHHH
Confidence 8999999998865421 0123344444333333322 123577788888899987665544
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00049 Score=73.52 Aligned_cols=76 Identities=18% Similarity=0.193 Sum_probs=62.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----------CCeeEEEeecCCCCchHHHhhc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----------GRVEATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----------~~v~~v~lDV~D~~~e~L~elI 631 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.+.+++
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~ 82 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGE-GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSE--ARAARCLL 82 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTS--HHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCC--HHHHHHHH
Confidence 457899999 799999999999987 578999999999888776543 357788999998 88888777
Q ss_pred cCC--------cEEEEcCC
Q psy12817 632 RSA--------DLVVSLLP 642 (1201)
Q Consensus 632 ~~~--------DVVIs~lP 642 (1201)
+++ |+||++..
T Consensus 83 ~~~~~~~g~i~d~vi~~Ag 101 (264)
T 2pd6_A 83 EQVQACFSRPPSVVVSCAG 101 (264)
T ss_dssp HHHHHHHSSCCSEEEECCC
T ss_pred HHHHHHhCCCCeEEEECCC
Confidence 653 99999975
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00016 Score=82.74 Aligned_cols=97 Identities=18% Similarity=0.157 Sum_probs=66.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHcCCee-------EEEeecCCCCchHHHhhcc-CC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-EDIDKVTNEFGRVE-------ATLIDVNNGGSDNLSGLVR-SA 634 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-ekAe~La~~~~~v~-------~v~lDV~D~~~e~L~elI~-~~ 634 (1201)
|+||+|+| +|++|+.+++.|.++++++|+.+.++. ...+.+...++... ...+.+.+ .+..++++ ++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 84 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIP---TDPKHEEFEDV 84 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEE---SCTTSGGGTTC
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEe---CCHHHHhcCCC
Confidence 37999999 799999999999988888887664322 22222333332110 00001110 01223445 89
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
|+|+.|+|...+.+++..++++|++++|.+
T Consensus 85 DvV~~atp~~~~~~~a~~~~~aG~~VId~s 114 (354)
T 1ys4_A 85 DIVFSALPSDLAKKFEPEFAKEGKLIFSNA 114 (354)
T ss_dssp CEEEECCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CEEEECCCchHHHHHHHHHHHCCCEEEECC
Confidence 999999999999999999999999999986
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00025 Score=76.67 Aligned_cols=60 Identities=20% Similarity=0.376 Sum_probs=49.7
Q ss_pred CCC-eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 564 ESR-NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 564 ~mk-KVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
.|+ +|+|.| +|++|+.+++.|.++ +++|++.+|. ..|+.| .+.+.++++ ++|+||+
T Consensus 3 ~M~m~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~-----------------~~D~~d--~~~~~~~~~~~~~d~vi~ 62 (287)
T 3sc6_A 3 AMKERVIITGANGQLGKQLQEELNPE-EYDIYPFDKK-----------------LLDITN--ISQVQQVVQEIRPHIIIH 62 (287)
T ss_dssp --CEEEEEESTTSHHHHHHHHHSCTT-TEEEEEECTT-----------------TSCTTC--HHHHHHHHHHHCCSEEEE
T ss_pred cceeEEEEECCCCHHHHHHHHHHHhC-CCEEEEeccc-----------------ccCCCC--HHHHHHHHHhcCCCEEEE
Confidence 365 999999 699999999999887 5889999982 257887 888998888 6999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
|...
T Consensus 63 ~a~~ 66 (287)
T 3sc6_A 63 CAAY 66 (287)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9854
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0015 Score=73.96 Aligned_cols=76 Identities=25% Similarity=0.354 Sum_probs=59.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHH-hCCCCeEEEEeCCHHH---------HHHHH---HHc------CC---eeEEEeecCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLH-RDENIHITLGSLLKED---------IDKVT---NEF------GR---VEATLIDVNN 621 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La-~~~~~~VtVadR~~ek---------Ae~La---~~~------~~---v~~v~lDV~D 621 (1201)
.|+|+|.| +|++|+.+++.|+ +. +++|++.+|+... .+.+. ..+ ++ +..+..|+.|
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDT-NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC-CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhC-CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 36999999 6999999999999 76 5789999987543 33332 222 14 7889999998
Q ss_pred CCchHHHhhcc--C-CcEEEEcCCC
Q psy12817 622 GGSDNLSGLVR--S-ADLVVSLLPY 643 (1201)
Q Consensus 622 ~~~e~L~elI~--~-~DVVIs~lP~ 643 (1201)
.+.+.++++ + +|+||++...
T Consensus 81 --~~~~~~~~~~~~~~d~vih~A~~ 103 (397)
T 1gy8_A 81 --EDFLNGVFTRHGPIDAVVHMCAF 103 (397)
T ss_dssp --HHHHHHHHHHSCCCCEEEECCCC
T ss_pred --HHHHHHHHHhcCCCCEEEECCCc
Confidence 888988887 6 9999999864
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00053 Score=76.75 Aligned_cols=76 Identities=20% Similarity=0.263 Sum_probs=55.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-----HHHHHHH----cCCeeEEEeecCCCCchHHHhhccC-
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-----IDKVTNE----FGRVEATLIDVNNGGSDNLSGLVRS- 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-----Ae~La~~----~~~v~~v~lDV~D~~~e~L~elI~~- 633 (1201)
||+|+|.| +|++|+.+++.|++. +.+|++.+|+.+. ++.+... .+++..+..|+.| .+.+.+++++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~ 77 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSD--TSNLTRILREV 77 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECC---------------------CCEEECCCCSSC--HHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCC--HHHHHHHHHhc
Confidence 68999999 699999999999987 4789999998654 2222211 1367788899998 8889888875
Q ss_pred -CcEEEEcCCC
Q psy12817 634 -ADLVVSLLPY 643 (1201)
Q Consensus 634 -~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 78 ~~d~vih~A~~ 88 (372)
T 1db3_A 78 QPDEVYNLGAM 88 (372)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 6999999853
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0011 Score=75.13 Aligned_cols=78 Identities=18% Similarity=0.224 Sum_probs=59.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHH--------------------HHHHH-HcCCeeEEEeecC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDI--------------------DKVTN-EFGRVEATLIDVN 620 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekA--------------------e~La~-~~~~v~~v~lDV~ 620 (1201)
..+++|+|.| +|++|+.+++.|++. +++|++.+|..... +++.. ..+++..+..|+.
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKK-NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhC-CCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 4579999999 799999999999987 57999999875431 11111 1246888999999
Q ss_pred CCCchHHHhhccC--CcEEEEcCCC
Q psy12817 621 NGGSDNLSGLVRS--ADLVVSLLPY 643 (1201)
Q Consensus 621 D~~~e~L~elI~~--~DVVIs~lP~ 643 (1201)
| .+.+.+++++ +|+||++...
T Consensus 88 d--~~~~~~~~~~~~~D~Vih~A~~ 110 (404)
T 1i24_A 88 D--FEFLAESFKSFEPDSVVHFGEQ 110 (404)
T ss_dssp S--HHHHHHHHHHHCCSEEEECCSC
T ss_pred C--HHHHHHHHhccCCCEEEECCCC
Confidence 8 8889988887 9999999853
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00013 Score=75.10 Aligned_cols=70 Identities=14% Similarity=0.129 Sum_probs=57.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
++|+|+|.| +|++|+.+++.|.+++. .+|++.+|+.++ ..++++.+..|+.| .+.+.+++ +|+||++.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------~~~~~~~~~~D~~~--~~~~~~~~--~d~vi~~a 73 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------EHPRLDNPVGPLAE--LLPQLDGS--IDTAFCCL 73 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------CCTTEECCBSCHHH--HGGGCCSC--CSEEEECC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------cCCCceEEeccccC--HHHHHHhh--hcEEEECe
Confidence 357999999 79999999999999865 389999998765 13467778888887 77777777 99999998
Q ss_pred CC
Q psy12817 642 PY 643 (1201)
Q Consensus 642 P~ 643 (1201)
..
T Consensus 74 ~~ 75 (215)
T 2a35_A 74 GT 75 (215)
T ss_dssp CC
T ss_pred ee
Confidence 64
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00068 Score=72.97 Aligned_cols=77 Identities=16% Similarity=0.203 Sum_probs=63.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----C-CeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----G-RVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~-~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++++.+ . ++..+.+|++| .+.++++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARN-GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE--PGDIDRLFEKARD 82 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence 457899999 799999999999987 578999999998887766543 2 57888999998 888887776
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 83 ~~gid~lv~~Ag~ 95 (260)
T 2z1n_A 83 LGGADILVYSTGG 95 (260)
T ss_dssp TTCCSEEEECCCC
T ss_pred hcCCCEEEECCCC
Confidence 58999999853
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00066 Score=74.31 Aligned_cols=79 Identities=14% Similarity=0.271 Sum_probs=66.3
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
+.+.|+++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++++ .++.++.+|++| .++++++++
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEA-GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQ--PDQVRGMLDQMTG 105 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHH
Confidence 45678999999 799999999999987 578999999998887776554 357889999998 888888776
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 106 ~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 106 ELGGIDIAVCNAGI 119 (276)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 78999999853
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00024 Score=81.01 Aligned_cols=96 Identities=20% Similarity=0.323 Sum_probs=67.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCC--HHHHHHHHHHcCC---e-eEEEeecCCCCchHHHhhccCCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLL--KEDIDKVTNEFGR---V-EATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~--~ekAe~La~~~~~---v-~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
.|+||.|+| +|++|+.+++.|.++++++++.. ++. .+.-+.+.+.+|. . .....+..+ ..++++++|
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~-----~~~~~~~~D 77 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSD-----ISEFSPGVD 77 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESS-----GGGTCTTCS
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCC-----HHHHhcCCC
Confidence 478999999 69999999999999888886654 443 1333334433331 1 111111101 233447899
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 636 LVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 636 VVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|+.|+|.....+.+..++++|+.+||.|
T Consensus 78 vvf~a~p~~~s~~~~~~~~~~g~~vIDlS 106 (337)
T 3dr3_A 78 VVFLATAHEVSHDLAPQFLEAGCVVFDLS 106 (337)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEECS
T ss_pred EEEECCChHHHHHHHHHHHHCCCEEEEcC
Confidence 99999998888899999999999999997
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00087 Score=72.81 Aligned_cols=78 Identities=18% Similarity=0.165 Sum_probs=63.9
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.+ .++..+.+|++| .+.++++++
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKE 95 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHH
Confidence 4568899999 799999999999987 578999999998877665433 357778899998 888877765
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 96 ~~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 96 KFGKLDTVVNAAGI 109 (267)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 68999999854
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00093 Score=72.90 Aligned_cols=78 Identities=15% Similarity=0.241 Sum_probs=63.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .++++++++
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVER 96 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence 3457899999 799999999999987 578999999998877665543 357788999998 888877765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 97 ~g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 97 YGPVDVLVNNAGR 109 (277)
T ss_dssp TCSCSEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 68999999853
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00078 Score=72.83 Aligned_cols=77 Identities=14% Similarity=0.235 Sum_probs=65.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+... ++..+.+|++| .++++++++ +.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i 82 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFGGL 82 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 457899999 799999999999987 5789999999998887766542 36788899998 888888877 79
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 83 D~lv~~Ag~ 91 (260)
T 1nff_A 83 HVLVNNAGI 91 (260)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999853
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00087 Score=72.16 Aligned_cols=77 Identities=17% Similarity=0.292 Sum_probs=63.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .++++++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKE-GAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT--PEGVDAVVESVRSS 82 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 457899999 799999999999987 578999999998877665443 357788899998 888887776
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 83 ~g~id~lv~~Ag~ 95 (263)
T 3ai3_A 83 FGGADILVNNAGT 95 (263)
T ss_dssp HSSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 78999999853
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0002 Score=80.92 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=58.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-----HHHHHHH----cC-CeeEEEeecCCCCchHHHhhccC-
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-----IDKVTNE----FG-RVEATLIDVNNGGSDNLSGLVRS- 633 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-----Ae~La~~----~~-~v~~v~lDV~D~~~e~L~elI~~- 633 (1201)
++|+|.| +|++|+.+++.|++. +++|++.+|+.++ ++.+... .+ ++..+..|+.| .+.+.+++++
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~ 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGK-GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD--ASSLRRWIDVI 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTC--HHHHHHHHHHH
T ss_pred CeEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCC--HHHHHHHHHhc
Confidence 7999999 599999999999987 4789999997653 2222111 12 57888999998 8888888885
Q ss_pred -CcEEEEcCCC
Q psy12817 634 -ADLVVSLLPY 643 (1201)
Q Consensus 634 -~DVVIs~lP~ 643 (1201)
.|+||+|...
T Consensus 106 ~~d~Vih~A~~ 116 (381)
T 1n7h_A 106 KPDEVYNLAAQ 116 (381)
T ss_dssp CCSEEEECCSC
T ss_pred CCCEEEECCcc
Confidence 6999999854
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00054 Score=74.92 Aligned_cols=79 Identities=14% Similarity=0.193 Sum_probs=65.4
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
..++|.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.+ .++.++.+|++| .++++++++
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 101 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGA-GYGVALAGRRLDALQETAAEIGDDALCVPTDVTD--PDSVRALFTATVEKFG 101 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTS--HHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 34567888889 699999999999987 578999999999998888766 367889999998 888888776
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 102 ~iD~lVnnAg~ 112 (272)
T 4dyv_A 102 RVDVLFNNAGT 112 (272)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999999753
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00013 Score=87.56 Aligned_cols=133 Identities=14% Similarity=0.220 Sum_probs=87.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHh-hccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSG-LVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~e-lI~~~DVVIs~lP 642 (1201)
+.++++|+|+|.+|+.++..|++.+ .+|++++|+.++++++++.++ ... .++.| +.+ .....|+|||++|
T Consensus 363 ~~k~vlV~GaGGig~aia~~L~~~G-~~V~i~~R~~~~a~~la~~~~-~~~--~~~~d-----l~~~~~~~~DilVN~ag 433 (523)
T 2o7s_A 363 ASKTVVVIGAGGAGKALAYGAKEKG-AKVVIANRTYERALELAEAIG-GKA--LSLTD-----LDNYHPEDGMVLANTTS 433 (523)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHHC-C-CEEEESSHHHHHHHHHHTT-C-C--EETTT-----TTTC--CCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHcC-Cce--eeHHH-----hhhccccCceEEEECCC
Confidence 4578999999999999999999875 589999999999999998773 222 22322 222 1235899999998
Q ss_pred CcccH-----HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEE
Q psy12817 643 YNLHH-----HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFV 717 (1201)
Q Consensus 643 ~~~h~-----~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~ 717 (1201)
..+++ ++....++....++|+.|.+..+ .+.+.|++.|..++++.+ |+..+.+.+ |.
T Consensus 434 vg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T-~ll~~a~~~G~~~i~Gl~-------mlv~Qa~~~----------f~ 495 (523)
T 2o7s_A 434 MGMQPNVEETPISKDALKHYALVFDAVYTPRIT-RLLREAEESGAITVSGSE-------MFVRQAYEQ----------FE 495 (523)
T ss_dssp TTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSC-HHHHHHHTTTCEEECHHH-------HHHHHHHHH----------HH
T ss_pred CCCCCCCCCCCCChHHcCcCcEEEEEeeCCccC-HHHHHHHHCCCEEECcHH-------HHHHHHHHH----------HH
Confidence 65432 23333345556688988865443 455778889998877544 444444333 45
Q ss_pred eecCCC
Q psy12817 718 SYCGGL 723 (1201)
Q Consensus 718 s~cGGL 723 (1201)
.|+|-.
T Consensus 496 lwtg~~ 501 (523)
T 2o7s_A 496 IFTGLP 501 (523)
T ss_dssp HHHSSC
T ss_pred HHhCCC
Confidence 688754
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00087 Score=72.15 Aligned_cols=77 Identities=17% Similarity=0.320 Sum_probs=64.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhcc------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++.+++.+.++ ++..+.+|++| .+.++++++
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK--DEDVRNLVDTTIAKH 90 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 3468999999 799999999999987 5789999999988777665542 57889999998 888888776
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 91 ~~id~li~~Ag 101 (278)
T 2bgk_A 91 GKLDIMFGNVG 101 (278)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 6899999985
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00051 Score=77.12 Aligned_cols=89 Identities=13% Similarity=0.125 Sum_probs=63.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC---CeEEEEeCCHH--HHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN---IHITLGSLLKE--DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~---~~VtVadR~~e--kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
++||+|||+|.||..++..|.+.+. .+|++.+|+.+ +++++.+ . ++.. .+ ...+.++++|+||.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~-~-G~~~-----~~----~~~e~~~~aDvVil 90 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRK-M-GVKL-----TP----HNKETVQHSDVLFL 90 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHH-H-TCEE-----ES----CHHHHHHHCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHH-c-CCEE-----eC----ChHHHhccCCEEEE
Confidence 4689999999999999999988652 67999999986 7777753 3 4432 11 23455678999999
Q ss_pred cCCCcccHHHHHHHH---HcCCeEEEcc
Q psy12817 640 LLPYNLHHHVAEFCI---QHGKNLVTAS 664 (1201)
Q Consensus 640 ~lP~~~h~~VakacI---eaGkh~VD~S 664 (1201)
|+|......+++... ..++-+++.+
T Consensus 91 av~~~~~~~vl~~l~~~l~~~~ivvs~s 118 (322)
T 2izz_A 91 AVKPHIIPFILDEIGADIEDRHIVVSCA 118 (322)
T ss_dssp CSCGGGHHHHHHHHGGGCCTTCEEEECC
T ss_pred EeCHHHHHHHHHHHHhhcCCCCEEEEeC
Confidence 999665555554332 2355677764
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0012 Score=71.87 Aligned_cols=89 Identities=17% Similarity=0.150 Sum_probs=63.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
|||+|||+|.||..++..|.+. +++|++.+|+.++++.+.+ . ++... +.+ .+.++ +++|+||.|+|...
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~-~-g~~~~---~~~----~~~~~-~~~D~vi~av~~~~ 69 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQSTCEKAVE-R-QLVDE---AGQ----DLSLL-QTAKIIFLCTPIQL 69 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH-T-TSCSE---EES----CGGGG-TTCSEEEECSCHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHh-C-CCCcc---ccC----CHHHh-CCCCEEEEECCHHH
Confidence 5899999999999999999886 4689999999999888753 3 32100 111 23445 78999999999776
Q ss_pred cHHHHHHHH---HcCCeEEEccC
Q psy12817 646 HHHVAEFCI---QHGKNLVTASY 665 (1201)
Q Consensus 646 h~~VakacI---eaGkh~VD~Sy 665 (1201)
+..+++... +.++.+++.+-
T Consensus 70 ~~~~~~~l~~~~~~~~~vv~~~~ 92 (279)
T 2f1k_A 70 ILPTLEKLIPHLSPTAIVTDVAS 92 (279)
T ss_dssp HHHHHHHHGGGSCTTCEEEECCS
T ss_pred HHHHHHHHHhhCCCCCEEEECCC
Confidence 666655432 34556666543
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00073 Score=80.58 Aligned_cols=92 Identities=18% Similarity=0.235 Sum_probs=69.8
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+...+|+|+|.|++|+++.+.++.+| .+|.+|+....+..... ..|..+ .
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G----------------~~V~v~d~~~~~~~~a~-~~G~~~------------~ 324 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLG----------------ATVWVTEIDPICALQAA-MEGYRV------------V 324 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTT----------------CEEEEECSCHHHHHHHH-TTTCEE------------C
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCC----------------CEEEEEeCChHhHHHHH-HcCCEe------------C
Confidence 467889999999999999999999998 55777776554421111 123211 1
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeecc
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISA 337 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~ 337 (1201)
. .++.++.+|+||++. .++.+|+++.++. |||| ++|+|++-
T Consensus 325 -~-l~ell~~aDiVi~~~----~t~~lI~~~~l~~-MK~g------------------AilINvgr 365 (494)
T 3d64_A 325 -T-MEYAADKADIFVTAT----GNYHVINHDHMKA-MRHN------------------AIVCNIGH 365 (494)
T ss_dssp -C-HHHHTTTCSEEEECS----SSSCSBCHHHHHH-CCTT------------------EEEEECSS
T ss_pred -C-HHHHHhcCCEEEECC----CcccccCHHHHhh-CCCC------------------cEEEEcCC
Confidence 1 235788999999997 6788999999999 9999 99999974
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.017 Score=72.62 Aligned_cols=76 Identities=18% Similarity=0.213 Sum_probs=58.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHH-hCCCCeEEEEeCC---HHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC--
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLH-RDENIHITLGSLL---KEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS-- 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La-~~~~~~VtVadR~---~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~-- 633 (1201)
.+.++|.| +|.+|+.+++.|+ +++-.+|++.+|+ .++++++.+++ .++.++.+|++| .+++++++++
T Consensus 530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd--~~~v~~~~~~~~ 607 (795)
T 3slk_A 530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVAD--RETLAKVLASIP 607 (795)
T ss_dssp TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHTSC
T ss_pred ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHH
Confidence 47889999 7999999999999 5543369999998 34444444432 247788999998 8888888764
Q ss_pred ----CcEEEEcCC
Q psy12817 634 ----ADLVVSLLP 642 (1201)
Q Consensus 634 ----~DVVIs~lP 642 (1201)
.|+|||+..
T Consensus 608 ~~~~id~lVnnAG 620 (795)
T 3slk_A 608 DEHPLTAVVHAAG 620 (795)
T ss_dssp TTSCEEEEEECCC
T ss_pred HhCCCEEEEECCC
Confidence 489999874
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00083 Score=71.66 Aligned_cols=78 Identities=17% Similarity=0.316 Sum_probs=65.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+++ +++..+.+|++| .+.++++++
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALARE-GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSD--PESAKAMADRTLAE 83 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 3468999999 699999999999987 578999999999888776653 357788999998 888887776
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 84 ~g~id~li~~Ag~ 96 (253)
T 3qiv_A 84 FGGIDYLVNNAAI 96 (253)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 78999999753
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00067 Score=73.39 Aligned_cols=78 Identities=19% Similarity=0.310 Sum_probs=65.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++.++.+|++| .+.++++++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARA-GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD--RAQCDALAGRAVE 84 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC--HHHHHHHHHHHHH
Confidence 4568899999 799999999999987 579999999999888776554 357889999998 888887765
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+|||+...
T Consensus 85 ~~g~id~lvnnAg~ 98 (262)
T 3pk0_A 85 EFGGIDVVCANAGV 98 (262)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 78999999853
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00086 Score=71.99 Aligned_cols=75 Identities=19% Similarity=0.306 Sum_probs=62.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD--RDQVFAAVEQARKTLG 78 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence 46899999 799999999999987 578999999998887766543 357788999998 888887776
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 79 ~id~lv~nAg 88 (256)
T 1geg_A 79 GFDVIVNNAG 88 (256)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899999985
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00099 Score=71.39 Aligned_cols=78 Identities=15% Similarity=0.247 Sum_probs=66.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.+++++++++++ ++..+.+|++| .+.++++++ .
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKG-GAKVVIVDRDKAGAERVAGEIGDAALAVAADISK--EADVDAAVEAALSKFGK 83 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHhcCC
Confidence 3468999999 689999999999987 5789999999999998887763 57889999998 788877776 6
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 84 id~li~~Ag~ 93 (261)
T 3n74_A 84 VDILVNNAGI 93 (261)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCcc
Confidence 7999999753
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00074 Score=72.84 Aligned_cols=78 Identities=12% Similarity=0.206 Sum_probs=65.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ +++.++.+|++| .+.++++++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKA-GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTD--EQHREAVIKAALDQ 86 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 4568999999 799999999999987 578999999999888776543 457889999998 888877775
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 87 ~g~id~lv~nAg~ 99 (256)
T 3gaf_A 87 FGKITVLVNNAGG 99 (256)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 68999999853
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00074 Score=72.26 Aligned_cols=76 Identities=14% Similarity=0.245 Sum_probs=64.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.. ++..+.+|++| .++++++++ ..|
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id 79 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAV-GAHPVVMDVAD--PASVERGFAEALAHLGRLD 79 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTT-TCEEEECCTTC--HHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc-CCEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 357899999 799999999999987 578999999999988887766 47888999998 788877765 379
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+|||+...
T Consensus 80 ~lvn~Ag~ 87 (245)
T 1uls_A 80 GVVHYAGI 87 (245)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999853
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00037 Score=76.10 Aligned_cols=70 Identities=14% Similarity=0.254 Sum_probs=57.3
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|||+|.| +|++|+.+++.|++. +++|++.+|+.+...... .++++.+..|+.| .+ +.+++++ |+||++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~--~~~~~~~~~Dl~d--~~-~~~~~~~-d~vih~A~ 71 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL-GYEVVVVDNLSSGRREFV--NPSAELHVRDLKD--YS-WGAGIKG-DVVFHFAA 71 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSSCCGGGS--CTTSEEECCCTTS--TT-TTTTCCC-SEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCCchhhc--CCCceEEECcccc--HH-HHhhcCC-CEEEECCC
Confidence 5899999 599999999999987 579999999876543322 2468889999998 66 8888888 99999985
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00082 Score=71.66 Aligned_cols=76 Identities=12% Similarity=0.147 Sum_probs=64.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.++ ++.++.+|++| .++++++++ ..|
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVER-GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAH--HEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTS--HHHHHHHHHHHHHHHCSCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCceEEECCCCC--HHHHHHHHHHHHHhcCCCc
Confidence 57899999 699999999999987 5789999999999888776652 47888999998 888877765 579
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 80 ~lvnnAg~ 87 (235)
T 3l6e_A 80 LVLHCAGT 87 (235)
T ss_dssp EEEEECCC
T ss_pred EEEECCCC
Confidence 99999864
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00062 Score=73.77 Aligned_cols=77 Identities=13% Similarity=0.267 Sum_probs=63.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-------CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-------GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-------~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++++.+ .++..+.+|++| .+.++++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~ 81 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL 81 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC--HHHHHHHHHHHH
Confidence 457899999 699999999999987 578999999998887766544 247788999998 888888876
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 82 ~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 82 GKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHSCCCEEEECCC-
T ss_pred HHcCCCCEEEECCCC
Confidence 79999999863
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00092 Score=71.91 Aligned_cols=77 Identities=17% Similarity=0.202 Sum_probs=64.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++++.+ .++..+.+|++| .++++++++ +.
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQHLDVTI--EEDWQRVVAYAREEFGSV 80 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 457899999 699999999999987 578999999999888877654 247788899998 888887776 79
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 81 D~lv~nAg~ 89 (254)
T 1hdc_A 81 DGLVNNAGI 89 (254)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999853
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00064 Score=74.86 Aligned_cols=70 Identities=24% Similarity=0.369 Sum_probs=55.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----------------------CeeEEEeecCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----------------------RVEATLIDVNN 621 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----------------------~v~~v~lDV~D 621 (1201)
++||+|||+|.||..++..|++. +++|++.|+++++++++.+... ++..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~------- 75 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY------- 75 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-------
Confidence 57999999999999999999986 5799999999998877665310 0111
Q ss_pred CCchHHHhhccCCcEEEEcCCCc
Q psy12817 622 GGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 622 ~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
..++.+.++++|+||.|+|..
T Consensus 76 --~~~~~~~~~~aDlVi~av~~~ 96 (283)
T 4e12_A 76 --SDDLAQAVKDADLVIEAVPES 96 (283)
T ss_dssp --ESCHHHHTTTCSEEEECCCSC
T ss_pred --eCCHHHHhccCCEEEEeccCc
Confidence 124667788999999999975
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00073 Score=72.23 Aligned_cols=78 Identities=13% Similarity=0.094 Sum_probs=65.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.++|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.++++++ +
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS--EKDVQTALALAKGKFGR 86 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHHCCC
Confidence 3458999999 799999999999987 578999999988887776654 357888999998 888888876 7
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 87 id~li~~Ag~ 96 (265)
T 2o23_A 87 VDVAVNCAGI 96 (265)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999753
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0006 Score=74.00 Aligned_cols=77 Identities=17% Similarity=0.220 Sum_probs=65.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
++|+|+|.| +|++|+.+++.|++. +.+|++.+|+.++++++...++ ++..+.+|++| .+.++++++ +.
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i 80 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAA-GDTVIGTARRTEALDDLVAAYPDRAEAISLDVTD--GERIDVVAADVLARYGRV 80 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCC--HHHHHHHHHHHHHhCCCC
Confidence 468899999 799999999999987 5789999999999888877653 58889999998 888887776 68
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 81 d~lv~~Ag~ 89 (281)
T 3m1a_A 81 DVLVNNAGR 89 (281)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999753
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00073 Score=71.65 Aligned_cols=78 Identities=8% Similarity=0.110 Sum_probs=64.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.. .++..+.+|++| .+.+.++++
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD--EDGWTKLFDATEKAF 80 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 3457899999 799999999999987 578999999998887776554 367889999998 788887776
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~~id~li~~Ag~ 92 (251)
T 1zk4_A 81 GPVSTLVNNAGI 92 (251)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 48999999853
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00097 Score=73.08 Aligned_cols=79 Identities=13% Similarity=0.184 Sum_probs=67.3
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc---CCcE
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR---SADL 636 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~---~~DV 636 (1201)
+.+.|+|+|.| +|.+|+.+++.|+++ +.+|++++|+.++++++.+.++ ++.++.+|++| .++++++++ +.|+
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARR-GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQD--LSSVRRFADGVSGADV 89 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTC--HHHHHHHHHTCCCEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCC--HHHHHHHHHhcCCCCE
Confidence 45568999999 799999999999987 5789999999999988877653 57889999998 888888887 4699
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 90 lv~nAg~ 96 (291)
T 3rd5_A 90 LINNAGI 96 (291)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9999853
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0011 Score=70.87 Aligned_cols=77 Identities=14% Similarity=0.266 Sum_probs=63.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+++ .++..+.+|++| .+.++++++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAE-GAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD--RQGVDAAVASTVEAL 82 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 457899999 799999999999987 578999999998887776543 357788999998 888877765
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 83 g~id~lv~nAg~ 94 (247)
T 2jah_A 83 GGLDILVNNAGI 94 (247)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 68999999753
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00045 Score=77.78 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=57.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-----HHHHHH-----HcCCeeEEEeecCCCCchHHHhhccC-
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-----IDKVTN-----EFGRVEATLIDVNNGGSDNLSGLVRS- 633 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-----Ae~La~-----~~~~v~~v~lDV~D~~~e~L~elI~~- 633 (1201)
++|+|.| +|++|+.+++.|++. +.+|++.+|+.+. ++.+.. ..+++..+..|+.| .+.+.+++++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~ 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEK-GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD--STCLVKIINEV 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTC--HHHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCC--HHHHHHHHHhc
Confidence 7999999 799999999999987 5789999987543 222211 11367888999998 8889888875
Q ss_pred -CcEEEEcCCC
Q psy12817 634 -ADLVVSLLPY 643 (1201)
Q Consensus 634 -~DVVIs~lP~ 643 (1201)
.|+||+|...
T Consensus 102 ~~d~vih~A~~ 112 (375)
T 1t2a_A 102 KPTEIYNLGAQ 112 (375)
T ss_dssp CCSEEEECCSC
T ss_pred CCCEEEECCCc
Confidence 6999999854
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0011 Score=71.86 Aligned_cols=78 Identities=13% Similarity=0.208 Sum_probs=64.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN--REDIYSSAKKVKAE 105 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCC--HHHHHHHHHHHHHH
Confidence 4568999999 799999999999987 578999999998877765543 357889999998 777877765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 106 ~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 106 IGDVSILVNNAGV 118 (272)
T ss_dssp TCCCSEEEECCCC
T ss_pred CCCCcEEEECCCc
Confidence 68999999853
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0015 Score=77.72 Aligned_cols=120 Identities=13% Similarity=0.111 Sum_probs=73.8
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCee--------EEEeecCCCCchHHHhh
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVE--------ATLIDVNNGGSDNLSGL 630 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~--------~v~lDV~D~~~e~L~el 630 (1201)
..+||.|||+|+||.+++..|++. +++|++.|+++++++.+.+.. ++.. .-.+.+++ ++.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~tt----d~~~a 81 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFST----DIEAA 81 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEEC----CHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEEC----CHHHH
Confidence 358999999999999999999986 578999999999999887642 1110 00011222 34556
Q ss_pred ccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHH
Q psy12817 631 VRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLA 699 (1201)
Q Consensus 631 I~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA 699 (1201)
++++|+||.|+|.... +.| ..|++++....+.+.+.. +.|..+++..++.||-...++
T Consensus 82 ~~~aDvviiaVptp~~--------~~~--~~dl~~v~~v~~~i~~~l-~~~~iVV~~STv~~gt~~~l~ 139 (478)
T 2y0c_A 82 VAHGDVQFIAVGTPPD--------EDG--SADLQYVLAAARNIGRYM-TGFKVIVDKSTVPVGTAERVR 139 (478)
T ss_dssp HHHCSEEEECCCCCBC--------TTS--SBCCHHHHHHHHHHHHHC-CSCEEEEECSCCCTTHHHHHH
T ss_pred hhcCCEEEEEeCCCcc--------cCC--CccHHHHHHHHHHHHHhc-CCCCEEEEeCCcCCCchHHHH
Confidence 7789999999986432 001 123333322233332211 235555666677777655443
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00027 Score=78.32 Aligned_cols=76 Identities=24% Similarity=0.371 Sum_probs=59.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCC------CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDEN------IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~------~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-~~D 635 (1201)
++|+|+|.| +|++|+.+++.|++.+. .+|++.+|+.++... ...+++..+..|+.| .+.+.++++ ++|
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--~~~~~~~~~~~Dl~d--~~~~~~~~~~~~d 88 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--GFSGAVDARAADLSA--PGEAEKLVEARPD 88 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--TCCSEEEEEECCTTS--TTHHHHHHHTCCS
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--ccCCceeEEEcCCCC--HHHHHHHHhcCCC
Confidence 467999999 79999999999998752 689999997643321 112357788999998 788988885 899
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 89 ~vih~A~~ 96 (342)
T 2hrz_A 89 VIFHLAAI 96 (342)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999864
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00093 Score=72.75 Aligned_cols=79 Identities=14% Similarity=0.297 Sum_probs=66.6
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+..+ ++..+.+|++| .++++++++
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQ-GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSD--RKSIKQLAEVAEREME 100 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTS--HHHHHHHHHHHHHHHT
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence 34568999999 799999999999987 5789999999999988877653 57889999998 888877765
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 101 ~iD~lvnnAg~ 111 (266)
T 3grp_A 101 GIDILVNNAGI 111 (266)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999999854
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00088 Score=71.82 Aligned_cols=79 Identities=15% Similarity=0.187 Sum_probs=63.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCC--CeEEEEeCCHHHHHH---HHHHcCCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDEN--IHITLGSLLKEDIDK---VTNEFGRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~--~~VtVadR~~ekAe~---La~~~~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.++++|+|.| +|.+|+.+++.|++.+. .+|++.+|+.++++. +.....++.++.+|++| .+.++++++
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 96 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN--FDAYDKLVADIEG 96 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC--GGGHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCC--hHHHHHHHHHHHH
Confidence 5678999999 79999999999998753 799999998765443 33333468889999998 788887776
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 97 ~~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGI 112 (267)
T ss_dssp HHGGGCCSEEEECCCC
T ss_pred hcCCCCccEEEECCCc
Confidence 79999999853
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0012 Score=72.25 Aligned_cols=79 Identities=15% Similarity=0.310 Sum_probs=66.6
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
+.+.|+++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.. .++..+.+|++| .+.++++++
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKN-GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSS--AKDAESMVEKTTAKWG 100 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 34568999999 799999999999987 578999999999998887765 357888999998 888887776
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 101 ~iD~lv~nAg~ 111 (277)
T 4dqx_A 101 RVDVLVNNAGF 111 (277)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999999853
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.18 E-value=9.8e-05 Score=84.63 Aligned_cols=93 Identities=13% Similarity=0.180 Sum_probs=63.4
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCC-----CCeEEEE-eCC-HHHHHHHHHHcCCeeE-EEeecCCCCchHHHhhccCCc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDE-----NIHITLG-SLL-KEDIDKVTNEFGRVEA-TLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~-----~~~VtVa-dR~-~ekAe~La~~~~~v~~-v~lDV~D~~~e~L~elI~~~D 635 (1201)
|+||+|+| +|++|+.+++.|.+++ .++++.. +++ ..+ .+...+++... ..+++.+ .+ . +.++++|
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk--~~~~~~~~l~~~~~~~~~~--~~-~-~~~~~~D 82 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGS--TLGEHHPHLTPLAHRVVEP--TE-A-AVLGGHD 82 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTS--BGGGTCTTCGGGTTCBCEE--CC-H-HHHTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCC--chhhhcccccccceeeecc--CC-H-HHhcCCC
Confidence 67999999 8999999999999887 7786654 432 211 12222222110 0011111 11 1 2245899
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 636 LVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 636 VVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|+.|+|.....+++..+ ++|+.+||.|
T Consensus 83 vVf~alg~~~s~~~~~~~-~~G~~vIDlS 110 (352)
T 2nqt_A 83 AVFLALPHGHSAVLAQQL-SPETLIIDCG 110 (352)
T ss_dssp EEEECCTTSCCHHHHHHS-CTTSEEEECS
T ss_pred EEEECCCCcchHHHHHHH-hCCCEEEEEC
Confidence 999999999899999999 9999999987
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00091 Score=71.72 Aligned_cols=78 Identities=14% Similarity=0.261 Sum_probs=66.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .++++++++ .
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAAD-GATVIVSDINAEGAKAAAASIGKKARAIAADISD--PGSVKALFAEIQALTGG 80 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTC--HHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHHCCC
Confidence 4568999999 699999999999987 578999999999998887765 357788899998 888887776 6
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 81 id~lv~nAg~ 90 (247)
T 3rwb_A 81 IDILVNNASI 90 (247)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999853
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0011 Score=70.03 Aligned_cols=77 Identities=13% Similarity=0.209 Sum_probs=63.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.++|+|.| +|++|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|+.| .+.++++++
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASA-GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS--EESINKAFEEIYNL 82 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence 457899999 799999999999987 578999999998877665432 357788899998 888888776
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 83 ~~~~d~vi~~Ag~ 95 (248)
T 2pnf_A 83 VDGIDILVNNAGI 95 (248)
T ss_dssp SSCCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 78999999853
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00094 Score=73.01 Aligned_cols=78 Identities=13% Similarity=0.132 Sum_probs=64.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhcc------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++++++. ++.++.+|++| .+.++++++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEA-GARVFICARDAEACADTATRLSAYGDCQAIPADLSS--EAGARRLAQALGELS 103 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTS--HHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence 4568899999 699999999999987 5789999999988887766542 56778899998 788877765
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 104 g~iD~lvnnAg~ 115 (276)
T 2b4q_A 104 ARLDILVNNAGT 115 (276)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 68999999853
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0013 Score=70.83 Aligned_cols=77 Identities=16% Similarity=0.214 Sum_probs=63.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLV------- 631 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI------- 631 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+++++++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 458899999 799999999999987 578999999998877765543 247788899998 88887776
Q ss_pred -cCCcEEEEcCCC
Q psy12817 632 -RSADLVVSLLPY 643 (1201)
Q Consensus 632 -~~~DVVIs~lP~ 643 (1201)
...|+|||+...
T Consensus 85 ~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 85 HGKLNILVNNAGI 97 (260)
T ss_dssp TTCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 468999999853
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00065 Score=72.08 Aligned_cols=78 Identities=17% Similarity=0.217 Sum_probs=63.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.++|+|.| +|++|+.+++.|++. +.+|++.+|+ .++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 81 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARA-GAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT--SEACQQLVDEFVA 81 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHH
Confidence 3457899999 799999999999987 5789999998 77666655432 357788999998 888888877
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 82 ~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 82 KFGGIDVLINNAGG 95 (258)
T ss_dssp HHSSCSEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 79999999753
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0014 Score=70.83 Aligned_cols=77 Identities=18% Similarity=0.214 Sum_probs=63.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~ 87 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATT 87 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC--HHHHHHHHHHHH
Confidence 3458899999 799999999999987 578999999998877665432 357788899998 888887776
Q ss_pred ----CCcEEEEcCC
Q psy12817 633 ----SADLVVSLLP 642 (1201)
Q Consensus 633 ----~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 88 ~~~g~id~lv~nAg 101 (267)
T 1iy8_A 88 ERFGRIDGFFNNAG 101 (267)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 6799999975
|
| >3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O | Back alignment and structure |
|---|
Probab=97.15 E-value=0.001 Score=75.91 Aligned_cols=96 Identities=14% Similarity=0.190 Sum_probs=64.6
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeC--CHHHHHHHH---HHcCCe-----eE------------EE-eecCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSL--LKEDIDKVT---NEFGRV-----EA------------TL-IDVNN 621 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~Vt-VadR--~~ekAe~La---~~~~~v-----~~------------v~-lDV~D 621 (1201)
.||+|+|+|++|+.+++.|.++++++|+ |.|+ +.+.+..+. ..++.. +. +. +...|
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~d 83 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRN 83 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCSC
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecCC
Confidence 5999999999999999999988888855 5553 555554443 222211 11 11 11113
Q ss_pred CCchHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCe--EEEc
Q psy12817 622 GGSDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKN--LVTA 663 (1201)
Q Consensus 622 ~~~e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh--~VD~ 663 (1201)
++++.-.-.++|+|+.|+|...+.+.+..++++|++ ++|.
T Consensus 84 --p~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~ 125 (337)
T 3e5r_O 84 --PDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISA 125 (337)
T ss_dssp --GGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESS
T ss_pred --hHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEec
Confidence 333310013799999999999999999999999993 4444
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0018 Score=76.30 Aligned_cols=126 Identities=11% Similarity=0.090 Sum_probs=89.2
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe-------------eEEEeecCCCCchHHHh
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV-------------EATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v-------------~~v~lDV~D~~~e~L~e 629 (1201)
..|.+|.|||+|+||.+++-.|++. +++|+.+|.++++.+.+.+....+ ..-.+..+ .+..+
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~t----t~~~~ 93 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFA----ESAEE 93 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEC----SSHHH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEE----cCHHH
Confidence 4689999999999999999999976 579999999999998886532100 00001122 23556
Q ss_pred hccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHH--cCCEEEeccccCchhHHHHHHHHH
Q psy12817 630 LVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAAS--AGITVLNEVGLDPGIDHLLAMECI 703 (1201)
Q Consensus 630 lI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~Ake--AGVtil~e~GlDPGIdhmlA~~~i 703 (1201)
.++++|+++.|+|..... .| -.|++|+....+.+.+..+. .|.+++.+.-+-||...-+....+
T Consensus 94 ai~~ad~~~I~VpTP~~~--------d~--~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l 159 (444)
T 3vtf_A 94 AVAATDATFIAVGTPPAP--------DG--SADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAV 159 (444)
T ss_dssp HHHTSSEEEECCCCCBCT--------TS--SBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHH
T ss_pred HHhcCCceEEEecCCCCC--------CC--CCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHH
Confidence 678899999999865431 11 23777777777777666664 578899999999998764444333
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00053 Score=76.72 Aligned_cols=75 Identities=15% Similarity=0.221 Sum_probs=54.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----CCcEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-----SADLV 637 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-----~~DVV 637 (1201)
+.|+|+|.| +|++|+.+++.|++.+..+|++.+|+....+ ...++++. +..|+.| .+.+.++++ ++|+|
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~~~-~~~d~~~--~~~~~~~~~~~~~~~~d~V 119 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVDLN-IADYMDK--EDFLIQIMAGEEFGDVEAI 119 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTTTSC-CSEEEEH--HHHHHHHHTTCCCSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcccCce-EeeecCc--HHHHHHHHhhcccCCCCEE
Confidence 357899999 5999999999999875478999998765421 11222344 5678887 778888887 49999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
|++...
T Consensus 120 ih~A~~ 125 (357)
T 2x6t_A 120 FHEGAC 125 (357)
T ss_dssp EECCSC
T ss_pred EECCcc
Confidence 999853
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0011 Score=70.45 Aligned_cols=79 Identities=14% Similarity=0.270 Sum_probs=66.7
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc---CCcE
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR---SADL 636 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~---~~DV 636 (1201)
..+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++.....|++| .+.+.++++ +.|+
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKL-GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN--KEECSNLISKTSNLDI 87 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTS--HHHHHHHHHTCSCCSE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCC--HHHHHHHHHhcCCCCE
Confidence 45679999999 799999999999987 578999999999998887765 357788899998 888888776 5799
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||++...
T Consensus 88 li~~Ag~ 94 (249)
T 3f9i_A 88 LVCNAGI 94 (249)
T ss_dssp EEECCC-
T ss_pred EEECCCC
Confidence 9999853
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00095 Score=78.69 Aligned_cols=82 Identities=24% Similarity=0.269 Sum_probs=62.4
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCC--CCeEEEEeCCHHHHHH---HHHH----------------cCCeeEEEeec
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDE--NIHITLGSLLKEDIDK---VTNE----------------FGRVEATLIDV 619 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~--~~~VtVadR~~ekAe~---La~~----------------~~~v~~v~lDV 619 (1201)
..++|+|+|.| +|++|+.+++.|++.+ +.+|++.+|+.+.... +.+. .+++.++..|+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 35689999999 6999999999998864 5789999997654322 2111 14688999999
Q ss_pred CCC----CchHHHhhccCCcEEEEcCCC
Q psy12817 620 NNG----GSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 620 ~D~----~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.+. +.+.+.++++++|+||+|...
T Consensus 150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~ 177 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAETVDLIVDSAAM 177 (478)
T ss_dssp TSGGGGCCHHHHHHHHHHCCEEEECCSS
T ss_pred CCcccCCCHHHHHHHHcCCCEEEECccc
Confidence 830 156788889999999999853
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00097 Score=72.90 Aligned_cols=77 Identities=13% Similarity=0.212 Sum_probs=63.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhccC---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVRS--- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~~--- 633 (1201)
.+.++|+|.| +|++|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.+++++++
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD--PDMVQNTVSELIK 100 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC--HHHHHHHHHHHHH
Confidence 3458999999 799999999999987 578999999998877665542 357889999998 8888777664
Q ss_pred ----CcEEEEcCC
Q psy12817 634 ----ADLVVSLLP 642 (1201)
Q Consensus 634 ----~DVVIs~lP 642 (1201)
.|+||++..
T Consensus 101 ~~g~id~li~~Ag 113 (302)
T 1w6u_A 101 VAGHPNIVINNAA 113 (302)
T ss_dssp HTCSCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 499999985
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0011 Score=71.47 Aligned_cols=77 Identities=14% Similarity=0.375 Sum_probs=64.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++..+.+|++| .++++++++
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKE-GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN--TDDIQKMIEQIDEK 80 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 3468899999 699999999999987 578999999999988877654 257788999998 888887775
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 81 ~g~id~lv~nAg 92 (257)
T 3imf_A 81 FGRIDILINNAA 92 (257)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 6799999975
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00046 Score=75.50 Aligned_cols=68 Identities=22% Similarity=0.416 Sum_probs=56.4
Q ss_pred eEEEEc-CchhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcCC
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLLP 642 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~lP 642 (1201)
||+|.| +|++|+.+++.|.+. ++.+|++.+|+....+ ++..+..|+.| .+.+.++++ ++|+||++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------~~~~~~~D~~d--~~~~~~~~~~~~~d~vih~a~ 71 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------GIKFITLDVSN--RDEIDRAVEKYSIDAIFHLAG 71 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------TCCEEECCTTC--HHHHHHHHHHTTCCEEEECCC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------CceEEEecCCC--HHHHHHHHhhcCCcEEEECCc
Confidence 589999 799999999999886 4678999888754321 46778899998 888999888 8999999986
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 72 ~ 72 (317)
T 3ajr_A 72 I 72 (317)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0008 Score=77.55 Aligned_cols=77 Identities=21% Similarity=0.214 Sum_probs=57.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH---HHHHHH-------------HcCCeeEEEeecCCCCch
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED---IDKVTN-------------EFGRVEATLIDVNNGGSD 625 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek---Ae~La~-------------~~~~v~~v~lDV~D~~~e 625 (1201)
..+++|+|.| +|++|+.+++.|.+. +.+|++.+|+.+. .+++.+ ..+++.++..|+.| .+
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d--~~ 143 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGY-SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFEC--MD 143 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTT-EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC-----C
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcC-CCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCC--cc
Confidence 4578999999 699999999999654 6789999998762 222221 12578999999998 66
Q ss_pred HHHhhccCCcEEEEcCCC
Q psy12817 626 NLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 626 ~L~elI~~~DVVIs~lP~ 643 (1201)
.+. ...++|+||+|...
T Consensus 144 ~l~-~~~~~d~Vih~A~~ 160 (427)
T 4f6c_A 144 DVV-LPENMDTIIHAGAR 160 (427)
T ss_dssp CCC-CSSCCSEEEECCCC
T ss_pred cCC-CcCCCCEEEECCcc
Confidence 676 77889999999854
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00093 Score=72.53 Aligned_cols=76 Identities=12% Similarity=0.216 Sum_probs=64.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .++++++++ ..
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i 81 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFGRL 81 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHHcCCC
Confidence 457899999 799999999999987 579999999999988887765 357788999998 888877765 46
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|+|||+..
T Consensus 82 D~lvnnAg 89 (263)
T 2a4k_A 82 HGVAHFAG 89 (263)
T ss_dssp CEEEEGGG
T ss_pred cEEEECCC
Confidence 99999975
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00075 Score=73.08 Aligned_cols=60 Identities=15% Similarity=0.301 Sum_probs=51.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
..++|+|.| +|++|+.+++.|.+. +++|++.+|+ ..|+.| .+.+.++++ ++|+||+|
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~-----------------~~Dl~d--~~~~~~~~~~~~~d~vih~ 70 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGK-NVEVIPTDVQ-----------------DLDITN--VLAVNKFFNEKKPNVVINC 70 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTS-SEEEEEECTT-----------------TCCTTC--HHHHHHHHHHHCCSEEEEC
T ss_pred ccceEEEECCCChHHHHHHHHHHhC-CCeEEeccCc-----------------cCCCCC--HHHHHHHHHhcCCCEEEEC
Confidence 468999999 799999999999986 5789999986 158887 888998888 79999999
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
...
T Consensus 71 A~~ 73 (292)
T 1vl0_A 71 AAH 73 (292)
T ss_dssp CCC
T ss_pred Ccc
Confidence 864
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0011 Score=71.33 Aligned_cols=78 Identities=14% Similarity=0.248 Sum_probs=64.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-------CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-------GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-------~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
.+.+.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++.++.+|++| .++++++++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~ 81 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD--CTKADTEIKDI 81 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC--HHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC--HHHHHHHHHHH
Confidence 3468899999 699999999999987 578999999999888776543 457788999998 788877765
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 82 ~~~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAM 97 (250)
T ss_dssp HHHHCCEEEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 58999999854
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0011 Score=70.93 Aligned_cols=77 Identities=16% Similarity=0.248 Sum_probs=62.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+| +.++++++.+.+ .++..+.+|++| .+.+.++++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 81 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV--ESDVINLVQSAIK 81 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHH
Confidence 3467899999 799999999999987 578999999 887776665443 346788899998 788887776
Q ss_pred ---CCcEEEEcCC
Q psy12817 633 ---SADLVVSLLP 642 (1201)
Q Consensus 633 ---~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 82 ~~g~id~li~~Ag 94 (261)
T 1gee_A 82 EFGKLDVMINNAG 94 (261)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 7899999975
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0009 Score=72.10 Aligned_cols=78 Identities=15% Similarity=0.340 Sum_probs=65.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.+ +++.++.+|++| .++++++++
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAE-GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN--EDEVTAFLNAADAH 81 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC--HHHHHHHHHHHHhh
Confidence 3468899999 689999999999987 578999999998887776654 357889999998 888887776
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 82 g~id~lv~nAg~ 93 (252)
T 3h7a_A 82 APLEVTIFNVGA 93 (252)
T ss_dssp SCEEEEEECCCC
T ss_pred CCceEEEECCCc
Confidence 57999999853
|
| >1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00069 Score=76.11 Aligned_cols=81 Identities=19% Similarity=0.285 Sum_probs=57.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-----CeeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-----RVEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-----~v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
...+||.|||+|.||.+++..|++. +.+|++.+|+.++++.+.+... +... .+.+.+ +..+ ++++|+|
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~-~~~~~~----~~~~-~~~aDvV 84 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHEN-GEEVILWARRKEIVDLINVSHTSPYVEESKI-TVRATN----DLEE-IKKEDIL 84 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHHSCBTTBTTCCC-CSEEES----CGGG-CCTTEEE
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCCcccCCCCee-eEEEeC----CHHH-hcCCCEE
Confidence 3468999999999999999999986 5789999999999998876531 1100 011112 2345 6789999
Q ss_pred EEcCCCcccHHHH
Q psy12817 638 VSLLPYNLHHHVA 650 (1201)
Q Consensus 638 Is~lP~~~h~~Va 650 (1201)
|.|+|......++
T Consensus 85 il~vk~~~~~~v~ 97 (335)
T 1z82_A 85 VIAIPVQYIREHL 97 (335)
T ss_dssp EECSCGGGHHHHH
T ss_pred EEECCHHHHHHHH
Confidence 9999964433333
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0015 Score=72.22 Aligned_cols=78 Identities=17% Similarity=0.225 Sum_probs=65.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++..+.+|++| .++++++++
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARR-GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH--LDEMVRLADEAFRL 105 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence 4568999999 699999999999987 578999999999888776554 357889999998 888887775
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 106 ~g~id~lvnnAg~ 118 (301)
T 3tjr_A 106 LGGVDVVFSNAGI 118 (301)
T ss_dssp HSSCSEEEECCCC
T ss_pred CCCCCEEEECCCc
Confidence 68999999854
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0013 Score=71.84 Aligned_cols=76 Identities=13% Similarity=0.089 Sum_probs=65.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~DV 636 (1201)
.|+|+|-| ++.+|+.+++.|++. +.+|.+++|+.+++++++++.+++.++++|++| +++++++++ +.|+
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEA-GDKVCFIDIDEKRSADFAKERPNLFYFHGDVAD--PLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 47788889 789999999999987 589999999999999998888888999999998 777776654 5899
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
+||....
T Consensus 79 LVNNAG~ 85 (247)
T 3ged_A 79 LVNNACR 85 (247)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999853
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0011 Score=71.25 Aligned_cols=78 Identities=13% Similarity=0.276 Sum_probs=65.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+. ++..+.+|++| .++++++++ .
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~ 83 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAER-GAKVIGTATSESGAQAISDYLGDNGKGMALNVTN--PESIEAVLKAITDEFGG 83 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCC--HHHHHHHHHHHHHHcCC
Confidence 4468899999 799999999999987 5789999999999888876652 46788999998 888887776 6
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+|||+...
T Consensus 84 iD~lv~nAg~ 93 (248)
T 3op4_A 84 VDILVNNAGI 93 (248)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999753
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00084 Score=77.29 Aligned_cols=76 Identities=20% Similarity=0.262 Sum_probs=59.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.+++.+...+ .+|++.||+.++++.+.+.+. ... ..+..+ .+.+.++++++|+||+|++
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d~~~~~l~~~~~~~g-~~~-~~~~~~--~~~l~~~l~~aDvVi~~~~ 240 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMG-ATVTVLDINIDKLRQLDAEFC-GRI-HTRYSS--AYELEGAVKRADLVIGAVL 240 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTT-TSS-EEEECC--HHHHHHHHHHCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHhcC-Cee-EeccCC--HHHHHHHHcCCCEEEECCC
Confidence 45689999999999999999998864 589999999999887766552 221 223334 5678888899999999985
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 241 ~ 241 (377)
T 2vhw_A 241 V 241 (377)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.011 Score=67.06 Aligned_cols=95 Identities=12% Similarity=0.087 Sum_probs=69.7
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
++.-.++.|+|.|+.|+...+.++.+|+ ++.+|+......+... ..|.. +.
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~----------------~V~~~d~~~~~~~~~~-~~g~~------------~~ 192 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGA----------------TLQYHEAKALDTQTEQ-RLGLR------------QV 192 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCC----------------EEEEECSSCCCHHHHH-HHTEE------------EC
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCC----------------EEEEECCCCCcHhHHH-hcCce------------eC
Confidence 4566899999999999999999999984 3556654431222111 12321 11
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
. .+++++.+|+|+.++-..+.+-.+|..+.++. |||| ++|+|++
T Consensus 193 -~-l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~-mk~g------------------ailIN~a 236 (330)
T 4e5n_A 193 -A-CSELFASSDFILLALPLNADTLHLVNAELLAL-VRPG------------------ALLVNPC 236 (330)
T ss_dssp -C-HHHHHHHCSEEEECCCCSTTTTTCBCHHHHTT-SCTT------------------EEEEECS
T ss_pred -C-HHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhh-CCCC------------------cEEEECC
Confidence 1 13457789999999998888889999999988 9999 9999998
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0014 Score=70.61 Aligned_cols=79 Identities=18% Similarity=0.316 Sum_probs=65.3
Q ss_pred ccCCCeEEEEcC-c-hhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 562 TEESRNVLLLGA-G-YVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 562 ~~~mkKVLILGA-G-~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
..+.++|+|.|+ | .+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++.++.+|++| .+.++++++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~ 95 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS--TEAVDALITQT 95 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC--HHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC--HHHHHHHHHHH
Confidence 345789999996 8 5999999999987 578999999999887776654 368889999998 888877765
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 96 ~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCcEEEECCCc
Confidence 56999999853
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0014 Score=71.13 Aligned_cols=79 Identities=15% Similarity=0.236 Sum_probs=64.5
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
..+.|+|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++.++.+|++| .+.++++++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~ 93 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAA-GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE--PDAPAELARRAA 93 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--TTHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHH
Confidence 34568999999 699999999999987 578999999998887765442 357889999998 777777665
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 94 ~~~g~id~lv~nAg~ 108 (266)
T 4egf_A 94 EAFGGLDVLVNNAGI 108 (266)
T ss_dssp HHHTSCSEEEEECCC
T ss_pred HHcCCCCEEEECCCc
Confidence 68999999853
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00043 Score=77.09 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=59.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCC----CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC---CcEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDEN----IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS---ADLV 637 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~----~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~---~DVV 637 (1201)
|+|+|.| +|++|+.+++.|.+.+. ++|++.+|+..... + ..++++.+..|+.| .+.+.+++++ +|+|
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~--~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~d~v 76 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-H--EDNPINYVQCDISD--PDDSQAKLSPLTDVTHV 76 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-C--CSSCCEEEECCTTS--HHHHHHHHTTCTTCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-c--ccCceEEEEeecCC--HHHHHHHHhcCCCCCEE
Confidence 6899999 69999999999998653 78999999865433 1 12368889999998 8889999988 9999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
|+|...
T Consensus 77 ih~a~~ 82 (364)
T 2v6g_A 77 FYVTWA 82 (364)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999753
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00098 Score=72.87 Aligned_cols=75 Identities=13% Similarity=0.192 Sum_probs=63.5
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCC-------
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSA------- 634 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~------- 634 (1201)
|+++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+. ++..+.+|++| .+.++++++++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEA-GWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRD--RAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHTCCGGGSSC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHhCCC
Confidence 7899999 799999999999987 5789999999998888776553 57888999998 88888887654
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 99 D~lvnnAG~ 107 (272)
T 2nwq_A 99 RGLINNAGL 107 (272)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999853
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0011 Score=72.15 Aligned_cols=78 Identities=14% Similarity=0.124 Sum_probs=64.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-------CeeEEEeecCCCCchHHHhhcc--
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-------RVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-------~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.+. ++.++.+|++| .++++++++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~ 85 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAA-GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN--EDETARAVDAV 85 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS--HHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC--HHHHHHHHHHH
Confidence 4568999999 799999999999987 5789999999998877765541 46788899998 888877765
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 86 ~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 86 TAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 57999999753
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00096 Score=76.38 Aligned_cols=77 Identities=17% Similarity=0.180 Sum_probs=57.5
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEE-EeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEAT-LIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v-~lDV~D~~~e~L~elI~~~DV 636 (1201)
.++||.|||+|.+|.+++..|++. +++|++.+|++++++.+.+.. |++... .+.++ .++.+.++++|+
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t----~d~~ea~~~aDv 102 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARK-GQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY----CDLKASLEGVTD 102 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE----SCHHHHHTTCCE
T ss_pred cCCeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE----CCHHHHHhcCCE
Confidence 357999999999999999999986 478999999999998887652 222100 01111 246677889999
Q ss_pred EEEcCCCcc
Q psy12817 637 VVSLLPYNL 645 (1201)
Q Consensus 637 VIs~lP~~~ 645 (1201)
||.|+|...
T Consensus 103 VilaVp~~~ 111 (356)
T 3k96_A 103 ILIVVPSFA 111 (356)
T ss_dssp EEECCCHHH
T ss_pred EEECCCHHH
Confidence 999999753
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0011 Score=72.46 Aligned_cols=77 Identities=19% Similarity=0.352 Sum_probs=63.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.+ .++..+.+|++| .++++++++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVA-GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTD--RHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 357899999 699999999999987 578999999999888877654 347788899998 888877765
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 80 g~iD~lVnnAG~ 91 (264)
T 3tfo_A 80 GRIDVLVNNAGV 91 (264)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 68999999853
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00095 Score=73.89 Aligned_cols=77 Identities=19% Similarity=0.292 Sum_probs=54.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---------CC-eeE------------EEeecCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---------GR-VEA------------TLIDVNN 621 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---------~~-v~~------------v~lDV~D 621 (1201)
.|+||+|||+|.||..++..|++. +++|++.||+++++++..+.. .+ +.. ..+.+.
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~- 91 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS- 91 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE-
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe-
Confidence 478999999999999999999986 579999999998877643210 01 000 000111
Q ss_pred CCchHHHhhccCCcEEEEcCCCcc
Q psy12817 622 GGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 622 ~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
.++.+.++++|+||.|+|...
T Consensus 92 ---~~~~~~~~~aD~Vi~avp~~~ 112 (302)
T 1f0y_A 92 ---TDAASVVHSTDLVVEAIVENL 112 (302)
T ss_dssp ---SCHHHHTTSCSEEEECCCSCH
T ss_pred ---cCHHHhhcCCCEEEEcCcCcH
Confidence 235567789999999998754
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0013 Score=70.15 Aligned_cols=77 Identities=17% Similarity=0.311 Sum_probs=62.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+| +.++++++++.+ .++..+.+|++| .++++++++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQ-GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN--AEDVTNMVKQTVDV 79 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 457899999 799999999999987 578999999 888777665443 357788999998 888887776
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 80 ~g~id~lv~nAg~ 92 (246)
T 2uvd_A 80 FGQVDILVNNAGV 92 (246)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 68999999853
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0017 Score=70.03 Aligned_cols=77 Identities=17% Similarity=0.240 Sum_probs=63.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRD 81 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence 3458899999 799999999999987 578999999998887766543 247788899998 777776665
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 82 ~g~id~lv~nAg 93 (262)
T 1zem_A 82 FGKIDFLFNNAG 93 (262)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 6899999975
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00065 Score=78.23 Aligned_cols=111 Identities=14% Similarity=0.132 Sum_probs=77.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-cCCcEEEEc
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-RSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-~~~DVVIs~ 640 (1201)
+.+.++|+|+|+|.||+.+++.|.+. +.+|++.|++.++++++++.+ +++.+ + .+ +++ .++|+++.|
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~~~~l~~~a~~~-ga~~v-----~--~~---~ll~~~~DIvip~ 237 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTE-GAKLVVTDVNKAAVSAAVAEE-GADAV-----A--PN---AIYGVTCDIFAPC 237 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHH-CCEEC-----C--GG---GTTTCCCSEEEEC
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHc-CCEEE-----C--hH---HHhccCCcEeecc
Confidence 45679999999999999999999987 568889999999999988877 33321 2 22 223 389999999
Q ss_pred CC-CcccHHHHHHHHHcCCeEEEccCChHHH-HHHHHHHHHcCCEEEec
Q psy12817 641 LP-YNLHHHVAEFCIQHGKNLVTASYLSPEM-MALHERAASAGITVLNE 687 (1201)
Q Consensus 641 lP-~~~h~~VakacIeaGkh~VD~Syvs~e~-~eLde~AkeAGVtil~e 687 (1201)
.. ..++...++. .|+.+|..+-..+.. .+..+..++.|+.++++
T Consensus 238 a~~~~I~~~~~~~---lg~~iV~e~An~p~t~~ea~~~L~~~Gi~~~Pd 283 (364)
T 1leh_A 238 ALGAVLNDFTIPQ---LKAKVIAGSADNQLKDPRHGKYLHELGIVYAPD 283 (364)
T ss_dssp SCSCCBSTTHHHH---CCCSEECCSCSCCBSSHHHHHHHHHHTCEECCH
T ss_pred chHHHhCHHHHHh---CCCcEEEeCCCCCcccHHHHHHHHhCCCEEecc
Confidence 73 3444443333 377787765322211 23556678899988763
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0016 Score=70.50 Aligned_cols=77 Identities=16% Similarity=0.228 Sum_probs=64.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++.++.+|++| .++++++++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQ-GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD--DAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3568899999 689999999999987 578999999999888776654 357889999998 888877765
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 86 ~g~id~lv~nAg 97 (264)
T 3ucx_A 86 YGRVDVVINNAF 97 (264)
T ss_dssp TSCCSEEEECCC
T ss_pred cCCCcEEEECCC
Confidence 6799999974
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0017 Score=68.88 Aligned_cols=77 Identities=10% Similarity=0.193 Sum_probs=63.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCe-eEEEeecCCCCchHHHhhc------cCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRV-EATLIDVNNGGSDNLSGLV------RSA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v-~~v~lDV~D~~~e~L~elI------~~~ 634 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++ ..+.+|++| .+.+++++ .+.
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~i 86 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAAS-GARLILIDREAAALDRAAQELGAAVAARIVADVTD--AEAMTAAAAEAEAVAPV 86 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC--HHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCC--HHHHHHHHHHHHhhCCC
Confidence 457899999 799999999999987 578999999999888776654 235 778899998 78887776 468
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 87 d~li~~Ag~ 95 (254)
T 2wsb_A 87 SILVNSAGI 95 (254)
T ss_dssp CEEEECCCC
T ss_pred cEEEECCcc
Confidence 999999853
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.001 Score=71.69 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=64.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ +++..+.+|++| .+.+.++++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSL-GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH--SDAIAAFATGVLAA 103 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC--HHHHHHHHHHHHHh
Confidence 4568899999 699999999999987 578999999999888776553 357888999998 788877765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 104 ~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 104 HGRCDVLVNNAGV 116 (262)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 48999999864
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00075 Score=73.86 Aligned_cols=72 Identities=18% Similarity=0.272 Sum_probs=56.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLL 641 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~l 641 (1201)
|+|+|.| +|++|+.+++.|++. +++|++.+|... ..+.+. +++..+..|+.| .+.+.++++ ++|+||++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~---~~~~~~~~Dl~~--~~~~~~~~~~~~~d~vi~~a 74 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLAR-GLEVAVLDNLATGKRENVP---KGVPFFRVDLRD--KEGVERAFREFRPTHVSHQA 74 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-TCEEEEECCCSSCCGGGSC---TTCCEECCCTTC--HHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC-CCEEEEEECCCcCchhhcc---cCeEEEECCCCC--HHHHHHHHHhcCCCEEEECc
Confidence 4899999 699999999999986 578998888532 211111 357788899998 888988888 799999998
Q ss_pred CC
Q psy12817 642 PY 643 (1201)
Q Consensus 642 P~ 643 (1201)
..
T Consensus 75 ~~ 76 (311)
T 2p5y_A 75 AQ 76 (311)
T ss_dssp SC
T ss_pred cc
Confidence 53
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0011 Score=70.89 Aligned_cols=76 Identities=8% Similarity=0.296 Sum_probs=63.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc---cCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV---RSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI---~~~DVVIs 639 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++. ..+++..+.+|++| .+.+++++ ...|+||+
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~--~~~~~~~~~~~~~id~lv~ 80 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELE-KYPGIQTRVLDVTK--KKQIDQFANEVERLDVLFN 80 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGG-GSTTEEEEECCTTC--HHHHHHHHHHCSCCSEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH-hccCceEEEeeCCC--HHHHHHHHHHhCCCCEEEE
Confidence 457899999 699999999999987 578999999998887776 55578889999998 77777654 46899999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 81 ~Ag~ 84 (246)
T 2ag5_A 81 VAGF 84 (246)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9853
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00046 Score=79.25 Aligned_cols=91 Identities=19% Similarity=0.224 Sum_probs=65.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcC------------CeeEEEeecCCCCchHHHh
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFG------------RVEATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~------------~v~~v~lDV~D~~~e~L~e 629 (1201)
+++||.|+| +|++|+-+++.|.+++.++++ +++++. .-+.+...+| ..... +. + .+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s-aGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~--~~---- 75 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS-VGKPYGEVVRWQTVGQVPKEIADMEIK--PT-D--PK---- 75 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT-TTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-C--GG----
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh-cCCChhHhcccccccccccccccceEE--eC-C--HH----
Confidence 357999999 699999999999999988865 455543 2233333222 11111 11 1 22
Q ss_pred hccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 630 LVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 630 lI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
.++++|+|+.|+|.....+.+..++++|+.+||.|
T Consensus 76 ~~~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlS 110 (359)
T 4dpk_A 76 LMDDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNS 110 (359)
T ss_dssp GCTTCCEEEECCCTTTHHHHHHHHHHTTCEEEECS
T ss_pred HhcCCCEEEECCChHHHHHHHHHHHHCCCEEEEcC
Confidence 24689999999999888999999999999999986
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00046 Score=79.25 Aligned_cols=91 Identities=19% Similarity=0.224 Sum_probs=65.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcC------------CeeEEEeecCCCCchHHHh
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFG------------RVEATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~------------~v~~v~lDV~D~~~e~L~e 629 (1201)
+++||.|+| +|++|+-+++.|.+++.++++ +++++. .-+.+...+| ..... +. + .+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s-aGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~--~~---- 75 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS-VGKPYGEVVRWQTVGQVPKEIADMEIK--PT-D--PK---- 75 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT-TTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-C--GG----
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh-cCCChhHhcccccccccccccccceEE--eC-C--HH----
Confidence 357999999 699999999999999988865 455543 2233333222 11111 11 1 22
Q ss_pred hccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 630 LVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 630 lI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
.++++|+|+.|+|.....+.+..++++|+.+||.|
T Consensus 76 ~~~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlS 110 (359)
T 4dpl_A 76 LMDDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNS 110 (359)
T ss_dssp GCTTCCEEEECCCTTTHHHHHHHHHHTTCEEEECS
T ss_pred HhcCCCEEEECCChHHHHHHHHHHHHCCCEEEEcC
Confidence 24689999999999888999999999999999987
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0016 Score=71.28 Aligned_cols=77 Identities=16% Similarity=0.272 Sum_probs=63.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---------CCeeEEEeecCCCCchHHHhhcc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---------GRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---------~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
.+.++|+|.| +|++|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.+.++++
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~ 92 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN--EEEVNNLVK 92 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC--HHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC--HHHHHHHHH
Confidence 3458999999 799999999999987 578999999998877665432 257888999998 888887776
Q ss_pred -------CCcEEEEcCC
Q psy12817 633 -------SADLVVSLLP 642 (1201)
Q Consensus 633 -------~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 93 ~~~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 4899999985
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0017 Score=71.39 Aligned_cols=78 Identities=22% Similarity=0.285 Sum_probs=64.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.+.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++++ .++.++.+|++| .++++++++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAAD-GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSD--ELQMRNAVRDLVLK 102 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 4467899999 699999999999987 579999999999988887664 357788999998 888877765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 103 ~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 103 FGHLDIVVANAGI 115 (283)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 68999999753
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0012 Score=70.96 Aligned_cols=75 Identities=15% Similarity=0.245 Sum_probs=63.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CCcE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SADL 636 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~DV 636 (1201)
|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.++ ++..+.+|++| .++++++++ +.|+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHTSCTTTCCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHhCCCCCE
Confidence 5788999 799999999999987 5889999999998888776653 57888999998 888887765 5799
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
|||+...
T Consensus 78 lvnnAg~ 84 (248)
T 3asu_A 78 LVNNAGL 84 (248)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999853
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.001 Score=72.48 Aligned_cols=77 Identities=14% Similarity=0.283 Sum_probs=63.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C---CeeEEEeecCCCCchHHHhhcc---
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G---RVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~---~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ . ++..+.+|++| .+.++++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~ 81 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL 81 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC--HHHHHHHHHHHH
Confidence 457899999 799999999999987 578999999998887766543 1 57788999998 888877765
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 82 ~~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGA 96 (280)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 68999999853
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00036 Score=76.46 Aligned_cols=71 Identities=14% Similarity=0.273 Sum_probs=52.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
||+|+|.| +|++|+.+++.|.+.+ ..|.+..++....+.+ .++++.+..|+.| +.+.++++++|+||++..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~---~~~~~~~~~Dl~~---~~~~~~~~~~d~vih~a~ 72 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV---NEAARLVKADLAA---DDIKDYLKGAEEVWHIAA 72 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS---CTTEEEECCCTTT---SCCHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc---CCCcEEEECcCCh---HHHHHHhcCCCEEEECCC
Confidence 68999999 6999999999999876 4455544544333222 2357888899985 567888889999999985
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0015 Score=70.13 Aligned_cols=77 Identities=21% Similarity=0.315 Sum_probs=62.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|+.| .+.++++++
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQD-GAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK--AEDRERLVAMAVNL 88 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHH
Confidence 3457899999 799999999999987 579999999998877665443 357778899998 777777765
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
+.|+||++..
T Consensus 89 ~g~iD~lv~~Ag 100 (260)
T 2zat_A 89 HGGVDILVSNAA 100 (260)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 7899999975
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0009 Score=73.05 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=65.8
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
+.+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+++ +++.++.+|++| .+.++++++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVA-GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTS--ESEIIEAFARLDE 99 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTC--HHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 45568999999 699999999999987 578999999999888776654 357788899998 888887776
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 100 ~~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 100 QGIDVDILVNNAGI 113 (271)
T ss_dssp HTCCCCEEEECCCC
T ss_pred HCCCCCEEEECCCC
Confidence 68999999853
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0014 Score=70.64 Aligned_cols=78 Identities=17% Similarity=0.237 Sum_probs=65.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .++++++++ .
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEG-GAEVLLTGRNESNIARIREEFGPRVHALRSDIAD--LNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHHhCC
Confidence 4568999999 799999999999987 579999999999998887765 357889999998 777776654 6
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|++||+...
T Consensus 83 id~lv~nAg~ 92 (255)
T 4eso_A 83 IDLLHINAGV 92 (255)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7999999753
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00062 Score=73.95 Aligned_cols=70 Identities=13% Similarity=0.214 Sum_probs=53.6
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHH--HHHHHHcCCeeEEEeecCCCCchHHHhhccC-----CcEEE
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDI--DKVTNEFGRVEATLIDVNNGGSDNLSGLVRS-----ADLVV 638 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekA--e~La~~~~~v~~v~lDV~D~~~e~L~elI~~-----~DVVI 638 (1201)
||+|.| +|++|+.+++.|++.+..+|++.+|+.... +.+. ++. +..|+.| .+.+.+++++ +|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~----~~~-~~~d~~~--~~~~~~~~~~~~~~~~d~vi 73 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----DLN-IADYMDK--EDFLIQIMAGEEFGDVEAIF 73 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----TSC-CSEEEEH--HHHHHHHHTTCCCSSCCEEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC----cce-ecccccc--HHHHHHHHhccccCCCcEEE
Confidence 589999 599999999999987547899999876542 2222 233 5678877 7788888875 99999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 74 ~~a~~ 78 (310)
T 1eq2_A 74 HEGAC 78 (310)
T ss_dssp ECCSC
T ss_pred ECccc
Confidence 99853
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0013 Score=72.19 Aligned_cols=78 Identities=13% Similarity=0.208 Sum_probs=65.9
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.+ .++..+.+|++| .+.++++++ .
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADE-GCHVLCADIDGDAADAAATKIGCGAAACRVDVSD--EQQIIAMVDACVAAFGG 103 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTC--HHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCC--HHHHHHHHHHHHHHcCC
Confidence 4568899999 799999999999987 579999999999998887765 357889999998 888777765 6
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 104 iD~lvnnAg~ 113 (277)
T 3gvc_A 104 VDKLVANAGV 113 (277)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7999999853
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0009 Score=71.44 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=53.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~lP 642 (1201)
|+|+|.| +|++|+.+++.|++ +++|++.+|+.+. + ++ +..|+.| .+.+.+++++ +|+||++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~--g~~V~~~~r~~~~-~------~~---~~~Dl~~--~~~~~~~~~~~~~d~vi~~a~ 66 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE--RHEVIKVYNSSEI-Q------GG---YKLDLTD--FPRLEDFIIKKRPDVIINAAA 66 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT--TSCEEEEESSSCC-T------TC---EECCTTS--HHHHHHHHHHHCCSEEEECCC
T ss_pred CEEEEECCCChhHHHHHHHHhc--CCeEEEecCCCcC-C------CC---ceeccCC--HHHHHHHHHhcCCCEEEECCc
Confidence 4799999 69999999999994 4889999998642 1 23 6789998 8889988886 999999986
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 67 ~ 67 (273)
T 2ggs_A 67 M 67 (273)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0022 Score=69.93 Aligned_cols=78 Identities=13% Similarity=0.179 Sum_probs=64.0
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
..+.|+++|.| +|.+|+.+++.|++. +.+|++++|+.+++++..+.+ .++.++.+|++| .+.++++++
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~ 100 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRH-GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA--PPAVMAAVDQAL 100 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHH
Confidence 34568999999 689999999999987 579999999998876665443 357889999998 888877765
Q ss_pred ----CCcEEEEcCC
Q psy12817 633 ----SADLVVSLLP 642 (1201)
Q Consensus 633 ----~~DVVIs~lP 642 (1201)
..|+|||+..
T Consensus 101 ~~~g~id~lv~nAg 114 (277)
T 4fc7_A 101 KEFGRIDILINCAA 114 (277)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCc
Confidence 6899999985
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00087 Score=71.95 Aligned_cols=77 Identities=13% Similarity=0.199 Sum_probs=64.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhccC-------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVRS-------A 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~~-------~ 634 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+++++++++ .
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i 81 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSS--EADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTC--HHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 457899999 699999999999987 578999999999888877665 357788899998 7887777654 6
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+|||+...
T Consensus 82 d~lv~~Ag~ 90 (253)
T 1hxh_A 82 NVLVNNAGI 90 (253)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999853
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00065 Score=75.13 Aligned_cols=74 Identities=14% Similarity=0.305 Sum_probs=59.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHH---H---HHHHHcCCeeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDI---D---KVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekA---e---~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
+|+|+|.| +|++|+.+++.|++. +++|++..|+.++. . .+. ..++++.+..|+.| .+.+.++++++|+|
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~-G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d--~~~~~~~~~~~D~V 84 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQK-GYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTD--ELSFEAPIAGCDFV 84 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHT-TCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTT--SSSSHHHHTTCSEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCC--hHHHHHHHcCCCEE
Confidence 68999999 799999999999986 57888888876532 1 222 12367888899998 77888899999999
Q ss_pred EEcCC
Q psy12817 638 VSLLP 642 (1201)
Q Consensus 638 Is~lP 642 (1201)
|++..
T Consensus 85 ih~A~ 89 (338)
T 2rh8_A 85 FHVAT 89 (338)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 99874
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0015 Score=71.06 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=61.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCc-hHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGS-DNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~-e~L~elI~--- 632 (1201)
.+.+.|+|.| +|.+|+.+++.|+++ +.+|++++|+.+++++..+.+ .++..+.+|++| . +.++++++
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~v~~~~~~~~ 86 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSN-GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD--PIATMSSLADFIK 86 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS--CHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC--cHHHHHHHHHHHH
Confidence 3467899999 699999999999987 579999999998877766543 357889999998 6 66655543
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 87 ~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 87 THFGKLDILVNNAGV 101 (311)
T ss_dssp HHHSSCCEEEECCCC
T ss_pred HhCCCCCEEEECCcc
Confidence 78999999854
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.015 Score=66.51 Aligned_cols=96 Identities=10% Similarity=0.101 Sum_probs=70.8
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
++.-.+|.|+|.|+.|+...+.++.+|+ ++.+|+......+.... .|..+ .
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~G~----------------~V~~~dr~~~~~~~~~~-~g~~~------------~ 211 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPFGC----------------NLLYHDRLQMAPELEKE-TGAKF------------V 211 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCC----------------EEEEECSSCCCHHHHHH-HCCEE------------C
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHCCC----------------EEEEeCCCccCHHHHHh-CCCeE------------c
Confidence 4566899999999999999999999984 35566543322222222 33211 1
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
+.+ +++++.+|+|+.++-..+.+-.+|..+.++. |||| ++|+|+|
T Consensus 212 ~~l-~ell~~aDvV~l~~Plt~~t~~li~~~~l~~-mk~g------------------ailIN~a 256 (351)
T 3jtm_A 212 EDL-NEMLPKCDVIVINMPLTEKTRGMFNKELIGK-LKKG------------------VLIVNNA 256 (351)
T ss_dssp SCH-HHHGGGCSEEEECSCCCTTTTTCBSHHHHHH-SCTT------------------EEEEECS
T ss_pred CCH-HHHHhcCCEEEECCCCCHHHHHhhcHHHHhc-CCCC------------------CEEEECc
Confidence 111 3567789999999988888888999999999 9999 9999998
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0014 Score=71.35 Aligned_cols=78 Identities=17% Similarity=0.250 Sum_probs=65.9
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .++++++++ .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~ 85 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARA-GARVVLADLPETDLAGAAASVGRGAVHHVVDLTN--EVSVRALIDFTIDTFGR 85 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC--HHHHHHHHHHHHHHcCC
Confidence 4568999999 699999999999987 578999999998888877665 357888999998 888888776 7
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 86 id~lv~nAg~ 95 (271)
T 3tzq_B 86 LDIVDNNAAH 95 (271)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999753
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0023 Score=69.57 Aligned_cols=78 Identities=14% Similarity=0.166 Sum_probs=63.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhc------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLV------ 631 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI------ 631 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.+++++
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHV 95 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence 3458899999 799999999999987 578999999998877665443 357788999998 78887776
Q ss_pred --cCCcEEEEcCCC
Q psy12817 632 --RSADLVVSLLPY 643 (1201)
Q Consensus 632 --~~~DVVIs~lP~ 643 (1201)
...|+||++...
T Consensus 96 ~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 96 FDGKLNILVNNAGV 109 (273)
T ss_dssp TTSCCCEEEECCCC
T ss_pred cCCCCcEEEECCCC
Confidence 468999999853
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0015 Score=69.14 Aligned_cols=76 Identities=17% Similarity=0.240 Sum_probs=62.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCC------eEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENI------HITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~------~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~- 632 (1201)
.|+|+|.| +|.+|+.+++.|++.+.. +|++.+|+.++++++...+ .++..+.+|++| .+.+.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD--MADVRRLTTH 79 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS--HHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCC--HHHHHHHHHH
Confidence 46899999 799999999999987432 8999999998887776543 247788999998 888887775
Q ss_pred ------CCcEEEEcCC
Q psy12817 633 ------SADLVVSLLP 642 (1201)
Q Consensus 633 ------~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 80 ~~~~~g~id~li~~Ag 95 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAG 95 (244)
T ss_dssp HHHHTSCCSEEEECCC
T ss_pred HHHhCCCCCEEEEcCC
Confidence 6899999975
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0012 Score=70.29 Aligned_cols=77 Identities=9% Similarity=0.188 Sum_probs=63.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.|+|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++++++.+.+ .++..+.+|++| .++++++++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASK-GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISD--IESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHc
Confidence 468899999 699999999999987 578999999998887776543 357889999998 888877765
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 81 ~~id~li~~Ag~ 92 (247)
T 3lyl_A 81 LAIDILVNNAGI 92 (247)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 46999999853
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0014 Score=78.03 Aligned_cols=92 Identities=16% Similarity=0.223 Sum_probs=69.4
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+...+|+|+|.|++|+++...++.+| .+|.+|+....+...... .| |.. .
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G----------------~~Viv~d~~~~~~~~a~~-~g--~~~----------~ 304 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLG----------------ARVYITEIDPICAIQAVM-EG--FNV----------V 304 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHT----------------CEEEEECSCHHHHHHHHT-TT--CEE----------C
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCc----------------CEEEEEeCChhhHHHHHH-cC--CEe----------c
Confidence 466789999999999999999999998 557777766544322211 22 211 1
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeecc
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISA 337 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~ 337 (1201)
. .++.++.+|+||++. .++.+|+.++++. |||| ++|+|++-
T Consensus 305 -~-l~ell~~aDiVi~~~----~t~~lI~~~~l~~-MK~g------------------ailiNvgr 345 (479)
T 1v8b_A 305 -T-LDEIVDKGDFFITCT----GNVDVIKLEHLLK-MKNN------------------AVVGNIGH 345 (479)
T ss_dssp -C-HHHHTTTCSEEEECC----SSSSSBCHHHHTT-CCTT------------------CEEEECSS
T ss_pred -C-HHHHHhcCCEEEECC----ChhhhcCHHHHhh-cCCC------------------cEEEEeCC
Confidence 1 235688999999994 7889999999999 9999 89999973
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0016 Score=70.01 Aligned_cols=75 Identities=20% Similarity=0.325 Sum_probs=61.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++ +++.+.... ..+.+|++| .++++++++ ..|
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~--~~~~~~~~~~~~~~~g~iD 79 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEG-KEVAEAIGG-AFFQVDLED--ERERVRFVEEAAYALGRVD 79 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTH-HHHHHHHTC-EEEECCTTC--HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCC--HHHHHHHHHHHHHHcCCCC
Confidence 457899999 799999999999987 4789999999887 666665544 778899998 777777765 679
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 80 ~lv~~Ag~ 87 (256)
T 2d1y_A 80 VLVNNAAI 87 (256)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999853
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0012 Score=73.02 Aligned_cols=78 Identities=12% Similarity=0.293 Sum_probs=63.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C---CeeEEEeecCCCCchHHHhhcc--
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G---RVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~---~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++++.+ . ++.++.+|++| .+.++++++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~ 100 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTT 100 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC--HHHHHHHHHHH
Confidence 3457899999 799999999999987 578999999998887766543 1 57788999998 888877765
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 101 ~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 101 LAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 68999999853
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.002 Score=68.91 Aligned_cols=78 Identities=10% Similarity=0.141 Sum_probs=60.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH--HHHHHHHHHcC--CeeEEEeecCCCCc-hHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK--EDIDKVTNEFG--RVEATLIDVNNGGS-DNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~--ekAe~La~~~~--~v~~v~lDV~D~~~-e~L~elI~----- 632 (1201)
+.|+|+|.| +|.+|+.+++.|++++...|++++|+. +.++++.+..+ ++.++.+|++| . ++++++++
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV--PVAESKKLLKKIFDQ 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS--CHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCC--ChHHHHHHHHHHHHh
Confidence 458899999 799999999999987533488899976 45666665543 47788899998 6 67766665
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 82 ~g~id~lv~~Ag~ 94 (254)
T 1sby_A 82 LKTVDILINGAGI 94 (254)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 68999999853
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0019 Score=70.54 Aligned_cols=77 Identities=12% Similarity=0.181 Sum_probs=63.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
++|.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++..+.+|++| .++++++++
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR-GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS--TDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 357899999 799999999999987 578999999999888776554 357889999998 888877765
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 100 g~id~lv~nAg~ 111 (279)
T 3sju_A 100 GPIGILVNSAGR 111 (279)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 57999999853
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0013 Score=72.93 Aligned_cols=78 Identities=21% Similarity=0.333 Sum_probs=64.4
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
+.+.|+|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++.++.+|++| .+.++++++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 114 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARA-GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD--PGSCADAARTVV 114 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC--HHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC--HHHHHHHHHHHH
Confidence 34568899999 699999999999987 579999999998888777654 357789999998 777777665
Q ss_pred ----CCcEEEEcCC
Q psy12817 633 ----SADLVVSLLP 642 (1201)
Q Consensus 633 ----~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 115 ~~~g~iD~lvnnAg 128 (293)
T 3rih_A 115 DAFGALDVVCANAG 128 (293)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 5799999975
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00056 Score=74.18 Aligned_cols=61 Identities=23% Similarity=0.255 Sum_probs=51.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~lP 642 (1201)
|||+|.| +|++|+.+++.|. . +++|++.+|+.. .+..|+.| .+.+.+++++ +|+||++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r~~~-------------~~~~D~~d--~~~~~~~~~~~~~d~vih~a~ 63 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P-VGNLIALDVHSK-------------EFCGDFSN--PKGVAETVRKLRPDVIVNAAA 63 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T-TSEEEEECTTCS-------------SSCCCTTC--HHHHHHHHHHHCCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-c-CCeEEEeccccc-------------cccccCCC--HHHHHHHHHhcCCCEEEECcc
Confidence 4899999 5999999999999 5 689999999751 23578888 8889988886 999999985
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 64 ~ 64 (299)
T 1n2s_A 64 H 64 (299)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0015 Score=70.95 Aligned_cols=77 Identities=21% Similarity=0.330 Sum_probs=64.9
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc------C
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR------S 633 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~------~ 633 (1201)
+.+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.++ ++.++.+|++| .++++++++ .
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHAD-GLGVVIADLAAEKGKALADELGNRAEFVSTNVTS--EDSVLAAIEAANQLGR 103 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHTTSSE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHhCC
Confidence 45568899999 699999999999987 5789999999999988887763 57889999998 888877765 4
Q ss_pred CcEEEEcC
Q psy12817 634 ADLVVSLL 641 (1201)
Q Consensus 634 ~DVVIs~l 641 (1201)
.|+||++.
T Consensus 104 id~lv~~a 111 (281)
T 3ppi_A 104 LRYAVVAH 111 (281)
T ss_dssp EEEEEECC
T ss_pred CCeEEEcc
Confidence 79999983
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0018 Score=69.37 Aligned_cols=77 Identities=13% Similarity=0.192 Sum_probs=63.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhc-------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLV------- 631 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI------- 631 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.+++++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSMF 89 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 458899999 799999999999987 578999999998877665443 357788899998 77787776
Q ss_pred -cCCcEEEEcCCC
Q psy12817 632 -RSADLVVSLLPY 643 (1201)
Q Consensus 632 -~~~DVVIs~lP~ 643 (1201)
.+.|+||++...
T Consensus 90 ~~~id~li~~Ag~ 102 (266)
T 1xq1_A 90 GGKLDILINNLGA 102 (266)
T ss_dssp TTCCSEEEEECCC
T ss_pred CCCCcEEEECCCC
Confidence 468999999853
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0016 Score=69.90 Aligned_cols=76 Identities=18% Similarity=0.269 Sum_probs=61.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH--HHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED--IDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek--Ae~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++ ++++.+.+ .++.++.+|++| .+.++++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAAD-GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD--KANFDSAIDEAAEK 78 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 47899999 799999999999987 5789999999877 66655443 357788999998 888877775
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 79 ~g~iD~lv~nAg~ 91 (258)
T 3a28_C 79 LGGFDVLVNNAGI 91 (258)
T ss_dssp HTCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 78999999853
|
| >1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00066 Score=77.52 Aligned_cols=83 Identities=16% Similarity=0.246 Sum_probs=56.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCC------CCeEEEEeCCHH-----HHHHHHHHc------CCeeEE-EeecCCCCch
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDE------NIHITLGSLLKE-----DIDKVTNEF------GRVEAT-LIDVNNGGSD 625 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~------~~~VtVadR~~e-----kAe~La~~~------~~v~~v-~lDV~D~~~e 625 (1201)
.|+||+|||+|.||.+++..|++.+ ..+|++.+|+++ +++.+.+.. ++.... .+.+. .
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~----~ 95 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAH----S 95 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEE----S
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEE----C
Confidence 3679999999999999999998753 168999999988 888776532 111000 00111 1
Q ss_pred HHHhhccCCcEEEEcCCCcccHHHH
Q psy12817 626 NLSGLVRSADLVVSLLPYNLHHHVA 650 (1201)
Q Consensus 626 ~L~elI~~~DVVIs~lP~~~h~~Va 650 (1201)
++.+.++++|+||.|+|......++
T Consensus 96 ~~~ea~~~aDvVilav~~~~~~~vl 120 (375)
T 1yj8_A 96 DLASVINDADLLIFIVPCQYLESVL 120 (375)
T ss_dssp STHHHHTTCSEEEECCCHHHHHHHH
T ss_pred CHHHHHcCCCEEEEcCCHHHHHHHH
Confidence 2445667899999999964433333
|
| >2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00087 Score=76.54 Aligned_cols=99 Identities=12% Similarity=0.220 Sum_probs=67.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCC---------C---CchHHHhhc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNN---------G---GSDNLSGLV 631 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D---------~---~~e~L~elI 631 (1201)
|+||+|+|+|+||+.+++.|.++++++| .|.+++++.+..+.+. .+... .....+ . ......+++
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~-dg~s~-~g~~~~~~~v~~~~~~~l~v~~~~~~~~ 79 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVE-KGYKL-FVAIPDNERVKLFEDAGIPVEGTILDII 79 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHH-TTCCE-EESSCCHHHHHHHHHTTCCCCCBGGGTG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHh-cCCcc-ccccCCCceeecccCCeEEECCchHHhc
Confidence 5699999999999999999998888884 4677776665555432 21111 000000 0 000123344
Q ss_pred cCCcEEEEcCCCcccHHHHH-HHHHcCCeEEEccC
Q psy12817 632 RSADLVVSLLPYNLHHHVAE-FCIQHGKNLVTASY 665 (1201)
Q Consensus 632 ~~~DVVIs~lP~~~h~~Vak-acIeaGkh~VD~Sy 665 (1201)
.++|+|+.|+|...+.+.+. .++++|+++++.+.
T Consensus 80 ~~vDiV~eatg~~~s~~~a~~~~l~aG~~VI~sap 114 (343)
T 2yyy_A 80 EDADIVVDGAPKKIGKQNLENIYKPHKVKAILQGG 114 (343)
T ss_dssp GGCSEEEECCCTTHHHHHHHHTTTTTTCEEEECTT
T ss_pred cCCCEEEECCCccccHHHHHHHHHHCCCEEEECCC
Confidence 68999999999888888885 99999999998654
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0017 Score=68.51 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=60.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeE-EEeecCCCCchHHHhhcc-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEA-TLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~-v~lDV~D~~~e~L~elI~----- 632 (1201)
||+|+|.| +|.+|+.+++.|++. +.+|++. +|+.++++++.+.. .++.. +.+|++| .+.++++++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~-G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 77 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAED-GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE--AEAATALVHQAAEV 77 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC--HHHHHHHHHHHHHh
Confidence 57899999 799999999999986 5788887 89988887765442 24555 8899998 788877754
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 78 ~~~~d~li~~Ag~ 90 (245)
T 2ph3_A 78 LGGLDTLVNNAGI 90 (245)
T ss_dssp HTCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 68999999853
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0017 Score=70.26 Aligned_cols=78 Identities=13% Similarity=0.151 Sum_probs=63.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
.+.|.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ + ++..+.+|++| .++++++++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~ 82 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEA-GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD--ALQVRAFAEACE 82 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC--HHHHHHHHHHHH
Confidence 4568899999 699999999999987 578999999999887766543 2 37788899998 778777664
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+|||+...
T Consensus 83 ~~~g~id~lvnnAg~ 97 (265)
T 3lf2_A 83 RTLGCASILVNNAGQ 97 (265)
T ss_dssp HHHCSCSEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 57999999853
|
| >2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00015 Score=85.31 Aligned_cols=120 Identities=13% Similarity=0.042 Sum_probs=76.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCC--CeEEEEe----CC--HHHHHH---HH---HHcCCeeEEEeecCCCCchHHH
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDEN--IHITLGS----LL--KEDIDK---VT---NEFGRVEATLIDVNNGGSDNLS 628 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~--~~VtVad----R~--~ekAe~---La---~~~~~v~~v~lDV~D~~~e~L~ 628 (1201)
.+.+||+|+|+|.+|+.++..|.+.+- -+|+++| |+ ..++++ +. ..+... .+... ....+.
T Consensus 184 l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~----~~~~~-~~~~L~ 258 (439)
T 2dvm_A 184 ISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKK----TNGEN-IEGGPQ 258 (439)
T ss_dssp TTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTT----SCTTC-CCSSHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhc----ccccc-ccccHH
Confidence 345799999999999999999998753 3799999 87 332222 22 111010 01100 023577
Q ss_pred hhccCCcEEEEcCCC--ccc-HHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEE-ecccc
Q psy12817 629 GLVRSADLVVSLLPY--NLH-HHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVL-NEVGL 690 (1201)
Q Consensus 629 elI~~~DVVIs~lP~--~~h-~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil-~e~Gl 690 (1201)
+.++++|+||+++|. .+. .+.++ .+..+.-++|+ |.+.. ..+-+.|+++|..++ ++.++
T Consensus 259 e~l~~aDVlInaT~~~~G~~~~e~v~-~m~~~~iVfDL-ynP~~-t~~~~~A~~~G~~ivatG~~m 321 (439)
T 2dvm_A 259 EALKDADVLISFTRPGPGVIKPQWIE-KMNEDAIVFPL-ANPVP-EILPEEAKKAGARIVATGRSD 321 (439)
T ss_dssp HHHTTCSEEEECSCCCSSSSCHHHHT-TSCTTCEEEEC-CSSSC-SSCHHHHHHHTCSEECBSCSS
T ss_pred HHhccCCEEEEcCCCccCCCChHHHH-hcCCCCEEEEC-CCCCC-cchHHHHHHcCCeEEcCCCch
Confidence 888999999999986 443 33322 34455678899 65432 234467888898777 65554
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0011 Score=71.07 Aligned_cols=78 Identities=14% Similarity=0.116 Sum_probs=57.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|.++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++.++.+|++| .++++++++ .
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQE-GATVLGLDLKPPAGEEPAAELGAAVRFRNADVTN--EADATAALAFAKQEFGH 81 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSCC------------CEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 3457899999 699999999999987 578999999998887776654 257788999998 888887776 7
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 82 id~lv~nAg~ 91 (257)
T 3tpc_A 82 VHGLVNCAGT 91 (257)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999753
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0016 Score=70.30 Aligned_cols=76 Identities=18% Similarity=0.167 Sum_probs=61.7
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhccC----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVRS---- 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~~---- 633 (1201)
.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++..+.+|++| .+++++++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVDH 83 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC--HHHHHHHHHHHHHH
Confidence 47899999 799999999999987 578999999998876655432 246788999998 8888877654
Q ss_pred ---CcEEEEcCCC
Q psy12817 634 ---ADLVVSLLPY 643 (1201)
Q Consensus 634 ---~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 84 ~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 84 FGRLDILVNNAGV 96 (267)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 6999999853
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00095 Score=73.00 Aligned_cols=79 Identities=16% Similarity=0.216 Sum_probs=64.1
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
+.+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.+.++++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~ 106 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGA-GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE--AGAGTDLIERAEA 106 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS--TTHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC--HHHHHHHHHHHHH
Confidence 45568899999 699999999999987 578999999988776665543 457889999998 777777665
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 107 ~g~iD~lvnnAg~ 119 (275)
T 4imr_A 107 IAPVDILVINASA 119 (275)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 68999999853
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0014 Score=70.46 Aligned_cols=77 Identities=16% Similarity=0.246 Sum_probs=64.5
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
.|+++|.| +|.+|+.+++.|++.+ +..|.+.+|+.++++++.+.++ ++.++.+|++| .+.++++++ ..
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i 79 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE--DSVLKQLVNAAVKGHGKI 79 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHhcCCc
Confidence 37889999 6999999999998875 5789999999999988887653 57888999998 888877765 67
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+|||+...
T Consensus 80 d~lvnnAg~ 88 (254)
T 3kzv_A 80 DSLVANAGV 88 (254)
T ss_dssp CEEEEECCC
T ss_pred cEEEECCcc
Confidence 999999853
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0017 Score=70.92 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=62.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.. .++..+.+|++| .+.++++++
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED--MTFAEQFVAQAGK 102 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCC--HHHHHHHHHHHHH
Confidence 4468999999 699999999999987 578999999998887766542 247788999998 777777765
Q ss_pred ---CCcEEEEcC
Q psy12817 633 ---SADLVVSLL 641 (1201)
Q Consensus 633 ---~~DVVIs~l 641 (1201)
+.|+||++.
T Consensus 103 ~~g~iD~li~na 114 (286)
T 1xu9_A 103 LMGGLDMLILNH 114 (286)
T ss_dssp HHTSCSEEEECC
T ss_pred HcCCCCEEEECC
Confidence 689999983
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0019 Score=70.52 Aligned_cols=77 Identities=13% Similarity=0.212 Sum_probs=64.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|.++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARR-GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND--ATAVDALVESTLKE 102 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC--HHHHHHHHHHHHHH
Confidence 4567899999 799999999999987 579999999999887776543 357788999998 888887776
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 103 ~g~iD~lvnnAg 114 (270)
T 3ftp_A 103 FGALNVLVNNAG 114 (270)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 6899999985
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0016 Score=69.89 Aligned_cols=78 Identities=17% Similarity=0.172 Sum_probs=62.9
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.++|+|.| +|++|+.+++.|+++ +.+|++.+| +.++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRR-GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK--PSEVVALFDKAVS 95 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHH
Confidence 3457899999 799999999999987 478999999 877776655432 357788999998 888888776
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 96 ~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 96 HFGGLDFVMSNSGM 109 (274)
T ss_dssp HHSCEEEEECCCCC
T ss_pred HcCCCCEEEECCCC
Confidence 78999999753
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0012 Score=73.84 Aligned_cols=78 Identities=15% Similarity=0.241 Sum_probs=64.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
.+.++|+|.| +|++|+.+++.|++. +.+|++++|+.++++++.+.+ + ++..+.+|++| .++++++++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~-G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~ 82 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQ-GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS--REGFKMAADEVE 82 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC--HHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC--HHHHHHHHHHHH
Confidence 3467999999 699999999999987 578999999999887776543 2 57889999998 888877765
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 83 ~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 83 ARFGPVSILCNNAGV 97 (319)
T ss_dssp HHTCCEEEEEECCCC
T ss_pred HhCCCCCEEEECCCc
Confidence 46999999853
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0016 Score=71.34 Aligned_cols=77 Identities=13% Similarity=0.183 Sum_probs=64.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++++|+.++++++...+ .++.++.+|++| .++++++++ ..
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i 80 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAE-GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRS--LQDQKRAAERCLAAFGKI 80 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHHHHHhcCCC
Confidence 468899999 799999999999987 579999999999998887765 357889999998 777777665 56
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|++||+...
T Consensus 81 D~lvnnAg~ 89 (281)
T 3zv4_A 81 DTLIPNAGI 89 (281)
T ss_dssp CEEECCCCC
T ss_pred CEEEECCCc
Confidence 999999853
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0028 Score=68.73 Aligned_cols=78 Identities=22% Similarity=0.235 Sum_probs=63.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHc----CCeeEEEeecCCCCch
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL------------KEDIDKVTNEF----GRVEATLIDVNNGGSD 625 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~------------~ekAe~La~~~----~~v~~v~lDV~D~~~e 625 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++++|+ .++++++.+.. .++.++.+|++| .+
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~ 87 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAAD-GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD--RE 87 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC--HH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC--HH
Confidence 4568999999 799999999999987 5789999987 66665554332 468889999998 88
Q ss_pred HHHhhcc-------CCcEEEEcCCC
Q psy12817 626 NLSGLVR-------SADLVVSLLPY 643 (1201)
Q Consensus 626 ~L~elI~-------~~DVVIs~lP~ 643 (1201)
.++++++ ..|+||++...
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 8888776 68999999853
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0017 Score=69.91 Aligned_cols=77 Identities=16% Similarity=0.317 Sum_probs=62.2
Q ss_pred CCCeEEEEcC---chhHHHHHHHHHhCCCCeEEEEeCCHH---HHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLGA---GYVSRPLIEYLHRDENIHITLGSLLKE---DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILGA---G~VG~~va~~La~~~~~~VtVadR~~e---kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|+|+|.|+ |.+|+.+++.|++. +.+|++.+|+.+ .++++.+..+++.++.+|++| .+.++++++
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQ--DEELDALFAGVKEA 83 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCC--HHHHHHHHHHHHHH
Confidence 4578999994 79999999999987 578999999875 455555555557888999998 888887776
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 84 ~g~iD~lv~~Ag~ 96 (261)
T 2wyu_A 84 FGGLDYLVHAIAF 96 (261)
T ss_dssp HSSEEEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 67999999853
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0011 Score=72.14 Aligned_cols=76 Identities=12% Similarity=0.156 Sum_probs=62.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
.++|+|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.. .++..+.+|++| .++++++++ ..
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~--~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i 88 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEE-GHPLLLLARRVERLKALNL--PNTLCAQVDVTD--KYTFDTAITRAEKIYGPA 88 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHTTCC--TTEEEEECCTTC--HHHHHHHHHHHHHHHCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHhhc--CCceEEEecCCC--HHHHHHHHHHHHHHCCCC
Confidence 4467899999 699999999999987 5789999999988876543 267888999998 888887776 68
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+|||+...
T Consensus 89 D~lvnnAg~ 97 (266)
T 3p19_A 89 DAIVNNAGM 97 (266)
T ss_dssp EEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999853
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.021 Score=65.34 Aligned_cols=94 Identities=9% Similarity=0.034 Sum_probs=68.8
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.++.|+|.|+.|+...+.++.+|+ ++.+|+......+ ...|.. |.
T Consensus 170 ~l~gktvGIIGlG~IG~~vA~~l~~~G~----------------~V~~~dr~~~~~~---~~~g~~------------~~ 218 (345)
T 4g2n_A 170 GLTGRRLGIFGMGRIGRAIATRARGFGL----------------AIHYHNRTRLSHA---LEEGAI------------YH 218 (345)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHTTTC----------------EEEEECSSCCCHH---HHTTCE------------EC
T ss_pred ccCCCEEEEEEeChhHHHHHHHHHHCCC----------------EEEEECCCCcchh---hhcCCe------------Ee
Confidence 4566899999999999999999999984 3555654322111 111221 11
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
+.+ +++++.+|+|+.++--.+.+-.+|.++.++. |||| ++++|+|
T Consensus 219 ~~l-~ell~~sDvV~l~~Plt~~T~~li~~~~l~~-mk~g------------------ailIN~a 263 (345)
T 4g2n_A 219 DTL-DSLLGASDIFLIAAPGRPELKGFLDHDRIAK-IPEG------------------AVVINIS 263 (345)
T ss_dssp SSH-HHHHHTCSEEEECSCCCGGGTTCBCHHHHHH-SCTT------------------EEEEECS
T ss_pred CCH-HHHHhhCCEEEEecCCCHHHHHHhCHHHHhh-CCCC------------------cEEEECC
Confidence 112 2467789999999988777888999999999 9999 9999998
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0026 Score=69.50 Aligned_cols=78 Identities=19% Similarity=0.266 Sum_probs=63.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK--KEEISEVINKILTE 118 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC--HHHHHHHHHHHHHh
Confidence 3458899999 799999999999986 578999999988877766543 357788999998 888887764
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 119 ~~~id~li~~Ag~ 131 (285)
T 2c07_A 119 HKNVDILVNNAGI 131 (285)
T ss_dssp CSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 68999999753
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0035 Score=69.28 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=56.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH----HHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc--CCcEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK----EDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR--SADLV 637 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~----ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~--~~DVV 637 (1201)
|+|+|.| +|++|+.+++.|++. +++|++.+|.. +.++.+.... .++..+..|+.| .+.+.++++ ++|+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~D~v 77 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN--EALMTEILHDHAIDTV 77 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC--HHHHHHHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCC--HHHHHHHhhccCCCEE
Confidence 4899999 699999999999986 57888887632 2333333221 357788999998 888888887 48999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
|++...
T Consensus 78 ih~A~~ 83 (338)
T 1udb_A 78 IHFAGL 83 (338)
T ss_dssp EECCSC
T ss_pred EECCcc
Confidence 999853
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0014 Score=72.05 Aligned_cols=77 Identities=17% Similarity=0.217 Sum_probs=64.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|.|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++.+.+ .++.++.+|++| .+.++++++
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFARE-GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGD--EALHEALVELAVRR 82 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 4467899999 699999999999987 578999999999988887665 357788899998 888877775
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 83 ~g~iD~lvnnAg 94 (280)
T 3tox_A 83 FGGLDTAFNNAG 94 (280)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 6899999975
|
| >1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0011 Score=74.07 Aligned_cols=70 Identities=17% Similarity=0.376 Sum_probs=54.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
.|||.|||+|.||..++..|+ . +++|++.||++++++++.+.+ .++++ .+ ++.+ ++++|+||.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~-----~~----~~~~-~~~aDlVie 79 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSEKALEAAREQIPEELLSKIEF-----TT----TLEK-VKDCDIVME 79 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCHHHHHHHHHHSCGGGGGGEEE-----ES----SCTT-GGGCSEEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCHHHHHHHHHHHHHHHhCCeEE-----eC----CHHH-HcCCCEEEE
Confidence 589999999999999999999 5 789999999999998877652 12221 11 2233 678999999
Q ss_pred cCCCccc
Q psy12817 640 LLPYNLH 646 (1201)
Q Consensus 640 ~lP~~~h 646 (1201)
|+|....
T Consensus 80 avpe~~~ 86 (293)
T 1zej_A 80 AVFEDLN 86 (293)
T ss_dssp CCCSCHH
T ss_pred cCcCCHH
Confidence 9997653
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0015 Score=71.22 Aligned_cols=79 Identities=15% Similarity=0.330 Sum_probs=65.4
Q ss_pred ccCCCeEEEEc-Cch--hHHHHHHHHHhCCCCeEEEEeCCH--HHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc----
Q psy12817 562 TEESRNVLLLG-AGY--VSRPLIEYLHRDENIHITLGSLLK--EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~--VG~~va~~La~~~~~~VtVadR~~--ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
..+.|+|+|.| +|. +|+.+++.|++. +.+|++.+|+. +.++++.+..+++.++.+|++| .++++++++
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHRE-GAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVIS--DQEIKDLFVELGK 99 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHT-TCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTC--HHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHc-CCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCC--HHHHHHHHHHHHH
Confidence 34568999999 455 999999999987 57899999987 7778887777778999999998 888877765
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 100 ~~g~id~li~nAg~ 113 (280)
T 3nrc_A 100 VWDGLDAIVHSIAF 113 (280)
T ss_dssp HCSSCCEEEECCCC
T ss_pred HcCCCCEEEECCcc
Confidence 46999999854
|
| >3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0016 Score=75.05 Aligned_cols=83 Identities=14% Similarity=0.128 Sum_probs=57.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEe---CCHHHHHHHHHHcC---------C--ee-EEEee-cCCCCchHHH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGS---LLKEDIDKVTNEFG---------R--VE-ATLID-VNNGGSDNLS 628 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVad---R~~ekAe~La~~~~---------~--v~-~v~lD-V~D~~~e~L~ 628 (1201)
||||+|||+|.+|..++..|++..+++|++.+ |+.++++.+.+... + .. ...++ ++ .++.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 77 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVIT----KDPE 77 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEE----SCHH
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEe----CCHH
Confidence 57999999999999999999875467899999 88888777433221 1 11 00111 22 2355
Q ss_pred hhccCCcEEEEcCCCcccHHHHH
Q psy12817 629 GLVRSADLVVSLLPYNLHHHVAE 651 (1201)
Q Consensus 629 elI~~~DVVIs~lP~~~h~~Vak 651 (1201)
+.++++|+||.|+|......+++
T Consensus 78 ~a~~~aD~Vilav~~~~~~~v~~ 100 (404)
T 3c7a_A 78 IAISGADVVILTVPAFAHEGYFQ 100 (404)
T ss_dssp HHHTTCSEEEECSCGGGHHHHHH
T ss_pred HHhCCCCEEEEeCchHHHHHHHH
Confidence 66789999999999876555444
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0023 Score=69.25 Aligned_cols=77 Identities=16% Similarity=0.234 Sum_probs=62.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc-----CCeeEEEeecCCCCc----hHHHhhcc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF-----GRVEATLIDVNNGGS----DNLSGLVR 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~-----~~v~~v~lDV~D~~~----e~L~elI~ 632 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++++| +.++++++.+.+ .++.++.+|++| . +.++++++
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL--SSSLLDCCEDIID 86 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS--STTHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCC--ccccHHHHHHHHH
Confidence 347899999 799999999999987 578999999 988877766543 357788999998 7 77777665
Q ss_pred -------CCcEEEEcCCC
Q psy12817 633 -------SADLVVSLLPY 643 (1201)
Q Consensus 633 -------~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 87 ~~~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 68999999853
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.003 Score=74.04 Aligned_cols=90 Identities=14% Similarity=0.267 Sum_probs=66.4
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+.-.+|+|+|.|.+|++..+.++.+| ++|.+++....+..... ..| |.. .
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~G----------------a~Viv~D~dp~ra~~A~-~~G--~~v----------~- 267 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMG----------------SIVYVTEIDPICALQAC-MDG--FRL----------V- 267 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT----------------CEEEEECSCHHHHHHHH-HTT--CEE----------C-
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCC----------------CEEEEEeCChhhhHHHH-HcC--CEe----------c-
Confidence 34479999999999999999999999 45666665443322222 123 211 0
Q ss_pred hhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 273 LFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
. .++.++.+|+||+| ..++.+|+.++++. ||+| .+||+++
T Consensus 268 ~-Leeal~~ADIVi~a----tgt~~lI~~e~l~~-MK~g------------------ailINvg 307 (435)
T 3gvp_A 268 K-LNEVIRQVDIVITC----TGNKNVVTREHLDR-MKNS------------------CIVCNMG 307 (435)
T ss_dssp C-HHHHTTTCSEEEEC----SSCSCSBCHHHHHH-SCTT------------------EEEEECS
T ss_pred c-HHHHHhcCCEEEEC----CCCcccCCHHHHHh-cCCC------------------cEEEEec
Confidence 1 13568899999997 66788999999999 9999 8999986
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00068 Score=74.18 Aligned_cols=74 Identities=14% Similarity=0.204 Sum_probs=56.4
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHH---HHHHHHHc----CCeeEEEeecCCCCchHHHhhccCCc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKED---IDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ek---Ae~La~~~----~~v~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
+|+|+|.| +|++|+.+++.|++. +++|++.+| +.+. ++.+. .+ +++..+..|+.| .+.+.++++++|
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d 76 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLEN-GYSVNTTIRADPERKRDVSFLT-NLPGASEKLHFFNADLSN--PDSFAAAIEGCV 76 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCCC----CCCHHHH-TSTTHHHHEEECCCCTTC--GGGGHHHHTTCS
T ss_pred CCEEEEECChhHHHHHHHHHHHHC-CCEEEEEEeCCccchhHHHHHH-hhhccCCceEEEecCCCC--HHHHHHHHcCCC
Confidence 37899999 799999999999986 578988888 6532 22221 11 136677889998 888999999999
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
+||++..
T Consensus 77 ~vih~A~ 83 (322)
T 2p4h_X 77 GIFHTAS 83 (322)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9999983
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0015 Score=70.25 Aligned_cols=76 Identities=13% Similarity=0.200 Sum_probs=61.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKA-GATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ--ESEVRSLFEQVDREQ 80 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC--HHHHHHHHHHHHHhc
Confidence 357899999 799999999999987 578999999998887766543 357788999998 777766553
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+|||+..
T Consensus 81 ~g~id~lvnnAg 92 (260)
T 2qq5_A 81 QGRLDVLVNNAY 92 (260)
T ss_dssp TTCCCEEEECCC
T ss_pred CCCceEEEECCc
Confidence 4599999983
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0018 Score=71.96 Aligned_cols=73 Identities=22% Similarity=0.251 Sum_probs=52.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHH--cCCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDI-DKVTNE--FGRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekA-e~La~~--~~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.++++|+|.| +|++|+.+++.|.+. +.+|++.+|+.... +.+... .+++..+..|+.+ . .+.++|+||
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~-----~~~~~d~vi 96 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMD-GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE--P-----LYIEVDQIY 96 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS--C-----CCCCCSEEE
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHC-CCEEEEEeCCCccchhhhhhhccCCceEEEeCccCC--h-----hhcCCCEEE
Confidence 4678999999 599999999999987 57899999864321 111111 2357788888876 3 356899999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
+|...
T Consensus 97 h~A~~ 101 (343)
T 2b69_A 97 HLASP 101 (343)
T ss_dssp ECCSC
T ss_pred ECccc
Confidence 99854
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.002 Score=79.33 Aligned_cols=78 Identities=17% Similarity=0.263 Sum_probs=60.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH----HHHHHHH-cCCeeEEEeecCCCCchHHHhhcc--CC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED----IDKVTNE-FGRVEATLIDVNNGGSDNLSGLVR--SA 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek----Ae~La~~-~~~v~~v~lDV~D~~~e~L~elI~--~~ 634 (1201)
.++|+|+|.| +|++|+.+++.|++. +.+|++.+|+... ++++... -.++..+..|+.| .+.+.++++ ++
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d--~~~l~~~~~~~~~ 85 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD--RKGLEKVFKEYKI 85 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTC--HHHHHHHHHHSCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCC--HHHHHHHHHhCCC
Confidence 3468999999 799999999999987 4789999886432 2222211 2467889999998 888999888 89
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 86 D~Vih~A~~ 94 (699)
T 1z45_A 86 DSVIHFAGL 94 (699)
T ss_dssp CEEEECCSC
T ss_pred CEEEECCcc
Confidence 999999854
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.054 Score=60.72 Aligned_cols=95 Identities=13% Similarity=0.117 Sum_probs=70.0
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+...+|.|+|.|+.|+...+.++.+|+ ++.+|+..... +.. ...|..+ .
T Consensus 139 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~----------------~V~~~d~~~~~-~~~-~~~g~~~------------~ 188 (307)
T 1wwk_A 139 ELEGKTIGIIGFGRIGYQVAKIANALGM----------------NILLYDPYPNE-ERA-KEVNGKF------------V 188 (307)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----------------EEEEECSSCCH-HHH-HHTTCEE------------C
T ss_pred ccCCceEEEEccCHHHHHHHHHHHHCCC----------------EEEEECCCCCh-hhH-hhcCccc------------c
Confidence 5667899999999999999999999983 45667655443 222 2233211 1
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeecc
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISA 337 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~ 337 (1201)
.+ +++++.+|+||.++--.+.+-.+|..+.++. |||| ++++|++-
T Consensus 189 -~l-~ell~~aDvV~l~~p~~~~t~~li~~~~l~~-mk~g------------------a~lin~ar 233 (307)
T 1wwk_A 189 -DL-ETLLKESDVVTIHVPLVESTYHLINEERLKL-MKKT------------------AILINTSR 233 (307)
T ss_dssp -CH-HHHHHHCSEEEECCCCSTTTTTCBCHHHHHH-SCTT------------------CEEEECSC
T ss_pred -CH-HHHHhhCCEEEEecCCChHHhhhcCHHHHhc-CCCC------------------eEEEECCC
Confidence 11 2456689999999988777778999888888 9999 88999875
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0027 Score=68.21 Aligned_cols=78 Identities=18% Similarity=0.184 Sum_probs=63.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeec--CCCCchHHHhhcc--
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDV--NNGGSDNLSGLVR-- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV--~D~~~e~L~elI~-- 632 (1201)
.+.|.|+|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.+ .++..+.+|+ .| .+.++++++
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~ 86 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARY-GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT--SENCQQLAQRI 86 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCC--HHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCC--HHHHHHHHHHH
Confidence 4568999999 699999999999987 578999999999887776543 2577889999 76 777776665
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 87 ~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 87 AVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHCSCCSEEEECCCC
T ss_pred HHhCCCCCEEEECCcc
Confidence 68999999753
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0022 Score=73.21 Aligned_cols=99 Identities=12% Similarity=0.085 Sum_probs=65.3
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHH----cCCeeEEEeec
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVTNE----FGRVEATLIDV 619 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La~~----~~~v~~v~lDV 619 (1201)
....+|+|+|+|.+|..++++|++.+--+++++|.+. .+++.+++. .|.++....+-
T Consensus 34 L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~ 113 (346)
T 1y8q_A 34 LRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTE 113 (346)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECS
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEec
Confidence 4568999999999999999999998666899996431 245544433 35555433221
Q ss_pred CCCCchHHHhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEc
Q psy12817 620 NNGGSDNLSGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 620 ~D~~~e~L~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~ 663 (1201)
.- .+...++++++|+||+|+-. .....+.+.|.+.++.+|+.
T Consensus 114 ~~--~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 114 DI--EKKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp CG--GGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cc--CcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 10 11245678899999999742 23345666676766666664
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0037 Score=68.43 Aligned_cols=79 Identities=15% Similarity=0.152 Sum_probs=62.8
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
..+.|.++|.| +|.+|+.+++.|++. +.+|++.+| +.++++++++.+ .++.++.+|++| .++++++++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 102 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAAS-GFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD--LSSHQATVDAVV 102 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS--GGGHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHH
Confidence 34567899999 699999999999987 578888885 777777665543 357889999998 788877776
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 103 ~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 103 AEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHSCCCEEEEECC-
T ss_pred HHcCCCCEEEECCCc
Confidence 78999999853
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.002 Score=68.12 Aligned_cols=77 Identities=19% Similarity=0.287 Sum_probs=59.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.++|+|.| +|.+|+.+++.|++. +.+|++. +|+.++++++.+.+ .++..+.+|++| .+.++++++
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~-G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 80 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNM-GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN--PEDVENMVKTAMDA 80 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTS--HHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHh
Confidence 457899999 799999999999987 4788887 67766665554432 357888999998 888887776
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 81 ~~~~d~vi~~Ag~ 93 (247)
T 2hq1_A 81 FGRIDILVNNAGI 93 (247)
T ss_dssp HSCCCEEEECC--
T ss_pred cCCCCEEEECCCC
Confidence 78999999853
|
| >1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0015 Score=73.55 Aligned_cols=83 Identities=10% Similarity=0.219 Sum_probs=57.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC------CCeEEEEeCCHH-----HHHHHHHHc------CCeeE-EEeecCCCCchH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE------NIHITLGSLLKE-----DIDKVTNEF------GRVEA-TLIDVNNGGSDN 626 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~------~~~VtVadR~~e-----kAe~La~~~------~~v~~-v~lDV~D~~~e~ 626 (1201)
++||+|||+|.||..++..|++.+ ..+|++.+|+.+ +++.+.+.. ++... ..+.+. .+
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~ 83 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAV----PD 83 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEE----SS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEE----cC
Confidence 469999999999999999998763 168999999988 777776532 11100 000111 23
Q ss_pred HHhhccCCcEEEEcCCCcccHHHHH
Q psy12817 627 LSGLVRSADLVVSLLPYNLHHHVAE 651 (1201)
Q Consensus 627 L~elI~~~DVVIs~lP~~~h~~Vak 651 (1201)
+.+.++++|+||.|+|......+++
T Consensus 84 ~~~~~~~aD~Vilav~~~~~~~v~~ 108 (354)
T 1x0v_A 84 VVQAAEDADILIFVVPHQFIGKICD 108 (354)
T ss_dssp HHHHHTTCSEEEECCCGGGHHHHHH
T ss_pred HHHHHcCCCEEEEeCCHHHHHHHHH
Confidence 5566789999999999765445444
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0012 Score=71.37 Aligned_cols=78 Identities=9% Similarity=0.122 Sum_probs=61.6
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH---c-CCeeEEEeecCCCCchHHHhhccC---
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE---F-GRVEATLIDVNNGGSDNLSGLVRS--- 633 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~---~-~~v~~v~lDV~D~~~e~L~elI~~--- 633 (1201)
+.+.|+|+|.| +|.+|+.+++.|+++ +.+|++.+|+.++.+++.+. . .++..+.+|++| .+.+++++++
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQA-GADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISD--PKSVEETISQQEK 107 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHH-TCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCC--HHHHHHHHHHHHH
Confidence 34568999999 799999999999987 57899999987655544432 1 357788999998 8888877754
Q ss_pred ----CcEEEEcCC
Q psy12817 634 ----ADLVVSLLP 642 (1201)
Q Consensus 634 ----~DVVIs~lP 642 (1201)
.|+||++..
T Consensus 108 ~~g~id~li~~Ag 120 (279)
T 3ctm_A 108 DFGTIDVFVANAG 120 (279)
T ss_dssp HHSCCSEEEECGG
T ss_pred HhCCCCEEEECCc
Confidence 899999975
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0035 Score=67.11 Aligned_cols=77 Identities=16% Similarity=0.304 Sum_probs=61.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-EDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+. +++++..... .++..+.+|++| .+.++++++ .
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~ 82 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFGR 82 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHcCC
Confidence 457899999 799999999999987 57899999998 7665433333 357788999998 788877653 6
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|+|||+...
T Consensus 83 id~lv~nAg~ 92 (249)
T 2ew8_A 83 CDILVNNAGI 92 (249)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999853
|
| >1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0041 Score=70.73 Aligned_cols=99 Identities=20% Similarity=0.204 Sum_probs=67.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeC-CHHHHHHHHH---HcCC----ee----EE--------EeecCCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSL-LKEDIDKVTN---EFGR----VE----AT--------LIDVNNGG 623 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR-~~ekAe~La~---~~~~----v~----~v--------~lDV~D~~ 623 (1201)
|.||+|+|+|++|+.+++.|.++++++|+ +.++ +.+...-+.+ -++. ++ .. .+...|
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d-- 78 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD-- 78 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS--
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCC--
Confidence 56999999999999999999999999865 4454 3333222221 1121 11 01 111222
Q ss_pred chHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 624 SDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 624 ~e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
++.+.-.-.++|+|+.|+|.....+.+...+++|+..||.|-
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa 120 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTG 120 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESS
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECC
Confidence 333321114799999999999999999999999999999974
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0023 Score=68.58 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=63.9
Q ss_pred ccCCCeEEEEc-C--chhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---
Q psy12817 562 TEESRNVLLLG-A--GYVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-A--G~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
..+.|+|+|.| + |.+|+.+++.|+++ +.+|++++|+. +.++++.+..+++.++.+|++| .++++++++
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~ 87 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVAD--DAQIDALFASLK 87 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHc-CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCC--HHHHHHHHHHHH
Confidence 45679999999 5 79999999999987 57899998874 3455565666678899999998 888887775
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 88 ~~~g~id~lv~nAg~ 102 (271)
T 3ek2_A 88 THWDSLDGLVHSIGF 102 (271)
T ss_dssp HHCSCEEEEEECCCC
T ss_pred HHcCCCCEEEECCcc
Confidence 56999999853
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0037 Score=71.33 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=65.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
.++||+|||+|.||..++..|.+. +++|++.||++++++.+.+ . ++.. ..+ ..+.+.+.++++|+||.|+|.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~~~~~~a~~-~-G~~~----~~~-~~e~~~~a~~~aDlVilavP~ 78 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAA-NHSVFGYNRSRSGAKSAVD-E-GFDV----SAD-LEATLQRAAAEDALIVLAVPM 78 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHT-TCCEEEECSCHHHHHHHHH-T-TCCE----ESC-HHHHHHHHHHTTCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-c-CCee----eCC-HHHHHHhcccCCCEEEEeCCH
Confidence 357999999999999999999987 4789999999998877543 3 4432 122 122344445578999999996
Q ss_pred cccHHHHHHH--HHcCCeEEEccCChH
Q psy12817 644 NLHHHVAEFC--IQHGKNLVTASYLSP 668 (1201)
Q Consensus 644 ~~h~~Vakac--IeaGkh~VD~Syvs~ 668 (1201)
..-..+++.. .+.++-++|.+-+..
T Consensus 79 ~~~~~vl~~l~~~~~~~iv~Dv~Svk~ 105 (341)
T 3ktd_A 79 TAIDSLLDAVHTHAPNNGFTDVVSVKT 105 (341)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECCSCSH
T ss_pred HHHHHHHHHHHccCCCCEEEEcCCCCh
Confidence 5434444322 245566777765443
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0036 Score=67.85 Aligned_cols=78 Identities=21% Similarity=0.218 Sum_probs=62.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHc----CCeeEEEeecCCCCch
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL------------KEDIDKVTNEF----GRVEATLIDVNNGGSD 625 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~------------~ekAe~La~~~----~~v~~v~lDV~D~~~e 625 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++++|+ .++++++.... .++..+.+|++| .+
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~ 84 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEE-GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD--RA 84 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC--HH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC-CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC--HH
Confidence 4568999999 799999999999987 5789999987 66665554332 357889999998 88
Q ss_pred HHHhhcc-------CCcEEEEcCCC
Q psy12817 626 NLSGLVR-------SADLVVSLLPY 643 (1201)
Q Consensus 626 ~L~elI~-------~~DVVIs~lP~ 643 (1201)
+++++++ ..|+|||+...
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCc
Confidence 8877776 78999999753
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0036 Score=68.10 Aligned_cols=78 Identities=22% Similarity=0.253 Sum_probs=63.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-------------CHHHHHHHHHHc----CCeeEEEeecCCCCc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-------------LKEDIDKVTNEF----GRVEATLIDVNNGGS 624 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-------------~~ekAe~La~~~----~~v~~v~lDV~D~~~ 624 (1201)
.+.|.++|.| +|.+|+.+++.|++. +.+|++++| +.++++++++.. .++..+.+|++| .
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~ 89 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAE-GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD--D 89 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC--H
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC--H
Confidence 4568999999 799999999999987 578999998 677777666543 357788899998 8
Q ss_pred hHHHhhcc-------CCcEEEEcCCC
Q psy12817 625 DNLSGLVR-------SADLVVSLLPY 643 (1201)
Q Consensus 625 e~L~elI~-------~~DVVIs~lP~ 643 (1201)
++++++++ ..|+|||+...
T Consensus 90 ~~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 90 AALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 88887775 68999999753
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0011 Score=72.59 Aligned_cols=78 Identities=24% Similarity=0.348 Sum_probs=62.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CC-eeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GR-VEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~-v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++.+ .. +.++.+|++| .++++++++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~ 107 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAE-GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD--PDQVAALFAAVRA 107 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC--HHHHHHHHHHHHH
Confidence 3568899999 699999999999987 578999999999887776544 22 4788999998 888877765
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+|||+...
T Consensus 108 ~~g~iD~lvnnAG~ 121 (281)
T 4dry_A 108 EFARLDLLVNNAGS 121 (281)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 56999999853
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.022 Score=65.27 Aligned_cols=175 Identities=15% Similarity=0.188 Sum_probs=102.0
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|.|+|.|+.|+...+.++.+|+ ++.+|+..... + .....|..+ .
T Consensus 157 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~----------------~V~~~d~~~~~-~-~~~~~g~~~------------~ 206 (352)
T 3gg9_A 157 VLKGQTLGIFGYGKIGQLVAGYGRAFGM----------------NVLVWGRENSK-E-RARADGFAV------------A 206 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----------------EEEEECSHHHH-H-HHHHTTCEE------------C
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCC----------------EEEEECCCCCH-H-HHHhcCceE------------e
Confidence 5667899999999999999999999984 46667654322 1 112233211 1
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeecc----CC--------
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISA----DP-------- 339 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~----D~-------- 339 (1201)
+.+ +++++.+|+|+.+.-..+.+-.+|..+.++. |||| ++++|+|- |.
T Consensus 207 ~~l-~ell~~aDiV~l~~Plt~~t~~li~~~~l~~-mk~g------------------ailIN~aRg~~vd~~aL~~aL~ 266 (352)
T 3gg9_A 207 ESK-DALFEQSDVLSVHLRLNDETRSIITVADLTR-MKPT------------------ALFVNTSRAELVEENGMVTALN 266 (352)
T ss_dssp SSH-HHHHHHCSEEEECCCCSTTTTTCBCHHHHTT-SCTT------------------CEEEECSCGGGBCTTHHHHHHH
T ss_pred CCH-HHHHhhCCEEEEeccCcHHHHHhhCHHHHhh-CCCC------------------cEEEECCCchhhcHHHHHHHHH
Confidence 111 2456789999999988888888999999988 9999 89999982 21
Q ss_pred CCCee------eeccccCCCCCeeeccCCCCccccccccCCeEEEeeCCcCCCchHHHHHHHHHHhHHHHHHHHhcCCCC
Q psy12817 340 GGSIE------FMNECTTIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQLPMEATDFFGNLVFPYALDILQSDASK 413 (1201)
Q Consensus 340 GGsiE------~~~~~TTid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~LP~eAS~~fs~~L~pyl~~l~~~~~~~ 413 (1201)
.|.|. |-.+|-..+.|+ +..+.|+ .-+++- ....++-+........-+..++.+.
T Consensus 267 ~g~i~gA~lDV~~~EPl~~~~pL-------------~~~~nvi--lTPHia-~~t~e~~~~~~~~~~~ni~~~~~G~--- 327 (352)
T 3gg9_A 267 RGRPGMAAIDVFETEPILQGHTL-------------LRMENCI--CTPHIG-YVERESYEMYFGIAFQNILDILQGN--- 327 (352)
T ss_dssp HTSSSEEEECCCSSSCCCSCCGG-------------GGCTTEE--ECCSCT-TCBHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred hCCccEEEecccCCCCCCCCChh-------------hcCCCEE--ECCCCC-CCCHHHHHHHHHHHHHHHHHHHcCC---
Confidence 13232 112332233443 3445553 345663 3445554545444444444444332
Q ss_pred cccccCCCHHHHhcccccCCeec
Q psy12817 414 PIEEHNFSPAVQAAIIASNGELT 436 (1201)
Q Consensus 414 ~~~~~~~~~~l~~Avi~~~G~Lt 436 (1201)
++.. -..++++.|+|-..|.-.
T Consensus 328 p~~~-Vn~~~~~~~~~~~~~~~~ 349 (352)
T 3gg9_A 328 VDSV-ANPTALAPALIRAEGHHH 349 (352)
T ss_dssp CTTB-SCGGGSSCTTTC------
T ss_pred CCcc-cCHHHHHHHHHhhccccc
Confidence 2211 114567777777777543
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0022 Score=70.21 Aligned_cols=60 Identities=13% Similarity=0.118 Sum_probs=50.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~l 641 (1201)
+|+|+|.| +|++|+.+++.|.+. +++|++.+|+. ..|+.| .+.+.++++ ++|+||+|.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~-g~~v~~~~r~~----------------~~D~~d--~~~~~~~~~~~~~d~vih~a 63 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQR-GDVELVLRTRD----------------ELNLLD--SRAVHDFFASERIDQVYLAA 63 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC-TTEEEECCCTT----------------TCCTTC--HHHHHHHHHHHCCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEecCc----------------cCCccC--HHHHHHHHHhcCCCEEEEcC
Confidence 47899999 699999999999986 57888887762 158887 888999998 899999998
Q ss_pred CC
Q psy12817 642 PY 643 (1201)
Q Consensus 642 P~ 643 (1201)
..
T Consensus 64 ~~ 65 (321)
T 1e6u_A 64 AK 65 (321)
T ss_dssp CC
T ss_pred ee
Confidence 54
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00087 Score=76.24 Aligned_cols=90 Identities=16% Similarity=0.139 Sum_probs=63.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhC--CCCeEEEE-eC-CHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRD--ENIHITLG-SL-LKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~--~~~~VtVa-dR-~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
+|+||+|+| +|++|+.+++.|.++ ++++++.+ ++ +..+ .+. +.+......+. + + +.++++|+|+
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~--~~~--~~~~~i~~~~~-~--~----~~~~~vDvVf 70 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGK--TYR--FNGKTVRVQNV-E--E----FDWSQVHIAL 70 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTC--EEE--ETTEEEEEEEG-G--G----CCGGGCSEEE
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCC--cee--ecCceeEEecC-C--h----HHhcCCCEEE
Confidence 468999999 899999999999987 67776554 43 2211 000 21222111221 1 1 1346899999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
.|+|...+.+.+..++++|+.+||.|
T Consensus 71 ~a~g~~~s~~~a~~~~~~G~~vId~s 96 (336)
T 2r00_A 71 FSAGGELSAKWAPIAAEAGVVVIDNT 96 (336)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECS
T ss_pred ECCCchHHHHHHHHHHHcCCEEEEcC
Confidence 99999899999999999999999986
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0005 Score=78.77 Aligned_cols=96 Identities=15% Similarity=0.172 Sum_probs=67.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.-|.||.|+| +|++|+-+++.|.+++.++++......+.-+++.+-+|... ..+.+.+ . +..++.+++|+|+.|+
T Consensus 11 ~~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~-~~l~~~~--~-~~~~~~~~~Dvvf~al 86 (351)
T 1vkn_A 11 HHMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTL-ENSILSE--F-DPEKVSKNCDVLFTAL 86 (351)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGC-CCCBCBC--C-CHHHHHHHCSEEEECC
T ss_pred cceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhc-cCceEEe--C-CHHHhhcCCCEEEECC
Confidence 4589999999 79999999999999998887655433333344444444332 1122222 1 1233346799999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEcc
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~S 664 (1201)
|.....+++..+ +|+.+||.|
T Consensus 87 p~~~s~~~~~~~--~g~~VIDlS 107 (351)
T 1vkn_A 87 PAGASYDLVREL--KGVKIIDLG 107 (351)
T ss_dssp STTHHHHHHTTC--CSCEEEESS
T ss_pred CcHHHHHHHHHh--CCCEEEECC
Confidence 988888888777 899999997
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0021 Score=69.21 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=61.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~~-----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++ ++++.+.+ .++..+.+|++| .+.++++++
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK--GEAVRGLVDNAVR 79 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS--HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHc-CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence 357899999 799999999999987 5789999999877 66655432 257778899998 888887775
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 80 ~~g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 80 QMGRIDILVNNAGI 93 (260)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hcCCCCEEEECCCC
Confidence 68999999853
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0038 Score=67.86 Aligned_cols=78 Identities=18% Similarity=0.237 Sum_probs=61.9
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHc----CCeeEEEeecCCCCch
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL------------KEDIDKVTNEF----GRVEATLIDVNNGGSD 625 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~------------~ekAe~La~~~----~~v~~v~lDV~D~~~e 625 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++++|+ .++++++.+.. .++.++.+|++| .+
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~ 84 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEA-GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD--RA 84 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC--HH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC--HH
Confidence 4568999999 799999999999987 5789999997 55555544322 357888999998 88
Q ss_pred HHHhhcc-------CCcEEEEcCCC
Q psy12817 626 NLSGLVR-------SADLVVSLLPY 643 (1201)
Q Consensus 626 ~L~elI~-------~~DVVIs~lP~ 643 (1201)
+++++++ ..|+||++...
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 85 ALESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCC
Confidence 8887776 68999999853
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0028 Score=68.67 Aligned_cols=78 Identities=10% Similarity=0.288 Sum_probs=62.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+++ + .+..+..|++| .+.++++++
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~g 84 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAE-GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT--EQGCQDVIEKYP 84 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS--HHHHHHHHHHCC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC--HHHHHHHHHhcC
Confidence 4457899999 699999999999987 578999999998877665443 2 35678899998 777777765
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 85 ~id~lv~nAg~ 95 (267)
T 3t4x_A 85 KVDILINNLGI 95 (267)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999999853
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0033 Score=70.11 Aligned_cols=72 Identities=17% Similarity=0.179 Sum_probs=53.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHcC--------CeeEEEeecCCCCchHHHhhccCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEFG--------RVEATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~~--------~v~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
|+||+|||+|.||.+++..|++.+- .+|++.|++.++++.++..+. .+... ..| + +.++++|
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~d-----~-~~~~~aD 71 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV---IND-----W-AALADAD 71 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE---ESC-----G-GGGTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEE---eCC-----H-HHhCCCC
Confidence 5799999999999999999987642 589999999998887765331 12211 122 3 4568999
Q ss_pred EEEEcCCCcc
Q psy12817 636 LVVSLLPYNL 645 (1201)
Q Consensus 636 VVIs~lP~~~ 645 (1201)
+||.++|...
T Consensus 72 vViiav~~~~ 81 (309)
T 1hyh_A 72 VVISTLGNIK 81 (309)
T ss_dssp EEEECCSCGG
T ss_pred EEEEecCCcc
Confidence 9999998644
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0032 Score=68.99 Aligned_cols=78 Identities=18% Similarity=0.325 Sum_probs=62.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
.++|+++|.| +|.+|+.+++.|++. +.+|++.+| +.++++++++.. .++..+.+|++| .++++++++
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 99 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKA-GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK--PSEIADMMAMVA 99 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC--HHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC--HHHHHHHHHHHH
Confidence 4568899999 699999999999987 578999999 666666665443 357788899998 888887775
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 100 ~~~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 100 DRFGGADILVNNAGV 114 (281)
T ss_dssp HHTSSCSEEEECCCC
T ss_pred HHCCCCCEEEECCCC
Confidence 68999999853
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0024 Score=69.35 Aligned_cols=77 Identities=14% Similarity=0.292 Sum_probs=62.0
Q ss_pred CCCeEEEEc-C--chhHHHHHHHHHhCCCCeEEEEeCCHH---HHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-A--GYVSRPLIEYLHRDENIHITLGSLLKE---DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-A--G~VG~~va~~La~~~~~~VtVadR~~e---kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|+|+|.| + |.+|+.+++.|++. +.+|++++|+.+ .++++.+..+++.++.+|++| .+.++++++
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK--EEHFKSLYNSVKKD 81 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 457899999 4 79999999999987 578999999875 555565555557889999998 888877765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 82 ~g~id~lv~nAg~ 94 (275)
T 2pd4_A 82 LGSLDFIVHSVAF 94 (275)
T ss_dssp TSCEEEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 57999999853
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0025 Score=67.27 Aligned_cols=75 Identities=13% Similarity=0.212 Sum_probs=60.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITL-GSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtV-adR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
|+|+|.| +|.+|+.+++.|++. +.+|++ .+|+.++++++.+.+ +++..+.+|++| .+.++++++
T Consensus 2 k~vlVTGasggiG~~la~~l~~~-G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKA-GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK--EADVEAMMKTAIDAWG 78 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS--HHHHHHHHHHHHHHSS
T ss_pred CEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC--HHHHHHHHHHHHHHcC
Confidence 6899999 799999999999987 478877 589988777665432 357788899998 888888776
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 79 ~id~li~~Ag~ 89 (244)
T 1edo_A 79 TIDVVVNNAGI 89 (244)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999999753
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.002 Score=69.65 Aligned_cols=76 Identities=14% Similarity=0.201 Sum_probs=61.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++. +|+.++++++++.+ .++..+.+|++| .++++++++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~-G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAEN-GYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ--PAKIKEMFQQIDET 79 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 357899999 799999999999987 5787775 99998887776653 357889999998 888887775
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 80 ~g~id~lv~nAg 91 (258)
T 3oid_A 80 FGRLDVFVNNAA 91 (258)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 4599999985
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0022 Score=69.20 Aligned_cols=77 Identities=13% Similarity=0.251 Sum_probs=61.1
Q ss_pred CCCeEEEEc-C--chhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-A--GYVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-A--G~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|+|+|.| + |.+|+.+++.|++. +.+|++.+|+. +.++++....++..++.+|++| .+.++++++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAE--DASIDTMFAELGKV 84 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCC--HHHHHHHHHHHHHH
Confidence 347899999 4 79999999999987 57899999987 4555565554556788899998 788877765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 85 ~g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 85 WPKFDGFVHSIGF 97 (265)
T ss_dssp CSSEEEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 57999999853
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0019 Score=72.43 Aligned_cols=108 Identities=17% Similarity=0.099 Sum_probs=79.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~ 643 (1201)
.++|+|+|+|.+|+.+++.|.+.+ . |+++++++++++ +.+ .++..+..|.+| ++.|+++ ++++|.||.+++.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g-~-v~vid~~~~~~~-~~~--~~~~~i~gd~~~--~~~L~~a~i~~a~~vi~~~~~ 187 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSE-V-FVLAEDENVRKK-VLR--SGANFVHGDPTR--VSDLEKANVRGARAVIVDLES 187 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSC-E-EEEESCGGGHHH-HHH--TTCEEEESCTTS--HHHHHHTCSTTEEEEEECCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC-c-EEEEeCChhhhh-HHh--CCcEEEEeCCCC--HHHHHhcChhhccEEEEcCCc
Confidence 468999999999999999998764 5 999999999998 654 378899999998 8888877 8899999999985
Q ss_pred c-ccHHHHHHHHHcCCe--EEEccCChHHHHHHHHHHHHcCCE
Q psy12817 644 N-LHHHVAEFCIQHGKN--LVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 644 ~-~h~~VakacIeaGkh--~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
. .+..++..+-+.+.+ ++.........+. .+++|+.
T Consensus 188 d~~n~~~~~~ar~~~~~~~iiar~~~~~~~~~----l~~~G~d 226 (336)
T 1lnq_A 188 DSETIHCILGIRKIDESVRIIAEAERYENIEQ----LRMAGAD 226 (336)
T ss_dssp HHHHHHHHHHHHTTCTTSEEEEECSSGGGHHH----HHHTTCS
T ss_pred cHHHHHHHHHHHHHCCCCeEEEEECCHHHHHH----HHHcCCC
Confidence 4 334455555566554 4443333222222 3467775
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.004 Score=68.18 Aligned_cols=77 Identities=16% Similarity=0.301 Sum_probs=64.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|.++|-| ++.+|+.+++.|++. +.+|.+++|+.++++++++++ .++.++++|++| +++++++++
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSK--KKDVEEFVRRTFET 81 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 5678899999 689999999999986 578999999999998887664 357789999998 888877664
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|++||...
T Consensus 82 ~G~iDiLVNNAG 93 (254)
T 4fn4_A 82 YSRIDVLCNNAG 93 (254)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 5899999875
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0026 Score=69.38 Aligned_cols=78 Identities=18% Similarity=0.376 Sum_probs=62.1
Q ss_pred cCCCeEEEEcC---chhHHHHHHHHHhCCCCeEEEEeCCHH---HHHHHHHHcCCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLGA---GYVSRPLIEYLHRDENIHITLGSLLKE---DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILGA---G~VG~~va~~La~~~~~~VtVadR~~e---kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|+|+|.|+ |.+|+.+++.|++. +.+|++++|+.+ .++++....+++..+.+|++| .+.++++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 95 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHRE-GAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSL--DEDIKNLKKFLEE 95 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCC--HHHHHHHHHHHHH
Confidence 34578999994 79999999999987 578999999875 455555555557788999998 888877765
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 96 ~~g~iD~lv~~Ag~ 109 (285)
T 2p91_A 96 NWGSLDIIVHSIAY 109 (285)
T ss_dssp HTSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 67999999853
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0017 Score=70.35 Aligned_cols=77 Identities=13% Similarity=0.024 Sum_probs=61.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++++|+.+++.+..... ++.++.+|++| .++++++++ ..
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~-~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i 100 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEH-GHRVIISYRTEHASVTELRQA-GAVALYGDFSC--ETGIMAFIDLLKTQTSSL 100 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESSCCHHHHHHHHH-TCEEEECCTTS--HHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhc-CCeEEECCCCC--HHHHHHHHHHHHHhcCCC
Confidence 4457899999 699999999999987 578999999987765444444 57889999998 888877765 58
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+||++...
T Consensus 101 D~lv~nAg~ 109 (260)
T 3gem_A 101 RAVVHNASE 109 (260)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999853
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0033 Score=68.40 Aligned_cols=78 Identities=18% Similarity=0.204 Sum_probs=62.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|.|+|.| +|.+|+.+++.|++. +.+|++.+| +.+.++++.+.. .++..+.+|++| .+.++++++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAA-GAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ--ESEVEALFAAVIE 102 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4567899999 699999999999987 578888887 666666655443 357788999998 888887776
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 103 ~~g~id~lv~nAg~ 116 (269)
T 4dmm_A 103 RWGRLDVLVNNAGI 116 (269)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 68999999753
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0025 Score=70.12 Aligned_cols=78 Identities=18% Similarity=0.224 Sum_probs=62.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEe-CCHHHHHHHHHHc-----CCeeEEEeecCCCCch----------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGS-LLKEDIDKVTNEF-----GRVEATLIDVNNGGSD---------- 625 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVad-R~~ekAe~La~~~-----~~v~~v~lDV~D~~~e---------- 625 (1201)
.+.|+++|.| +|.+|+.+++.|++. +.+|++++ |+.++++++++.+ .++.++.+|++| .+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~ 83 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN--VATAPVSGADGS 83 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS--SCBCCCC----C
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCC--cccccccccccc
Confidence 3457899999 799999999999987 57899999 9998887766543 257888999998 66
Q ss_pred -------HHHhhcc-------CCcEEEEcCCC
Q psy12817 626 -------NLSGLVR-------SADLVVSLLPY 643 (1201)
Q Consensus 626 -------~L~elI~-------~~DVVIs~lP~ 643 (1201)
.+.++++ ..|+|||+...
T Consensus 84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~ 115 (291)
T 1e7w_A 84 APVTLFTRCAELVAACYTHWGRCDVLVNNASS 115 (291)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cccchHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 7776665 68999999853
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.004 Score=65.96 Aligned_cols=78 Identities=10% Similarity=0.123 Sum_probs=62.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeec--CCCCchHHHhhcc--
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDV--NNGGSDNLSGLVR-- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV--~D~~~e~L~elI~-- 632 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++++++.+.+ +++..+.+|+ .| .+.+.++++
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~--~~~~~~~~~~~ 88 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAH-GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENAT--AQQYRELAARV 88 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCC--HHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCC--HHHHHHHHHHH
Confidence 4568999999 699999999999987 578999999999888776543 3566777787 66 667766654
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 89 ~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 89 EHEFGRLDGLLHNASI 104 (247)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHhCCCCCEEEECCcc
Confidence 68999999753
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0019 Score=72.51 Aligned_cols=78 Identities=10% Similarity=0.112 Sum_probs=60.5
Q ss_pred ccCCeEEEEEcCcH-HHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccc
Q psy12817 192 SIGPLTIVFTGSGN-VSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLY 270 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~-vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y 270 (1201)
++.+.+++|+|.|+ ||+-+...+.++| +.|++...+ .
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~g----------------AtVtv~hs~---------------t----------- 199 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNN----------------ATVTTCHSK---------------T----------- 199 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTT----------------CEEEEECTT---------------C-----------
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCC----------------CeEEEEECC---------------c-----------
Confidence 57789999999995 8999999998887 555655311 0
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCC
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADP 339 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~ 339 (1201)
. -.+++++.+||||+++.. |.+|+.++ +||| ++|+|++.+.
T Consensus 200 -~-~L~~~~~~ADIVI~Avg~----p~~I~~~~----vk~G------------------avVIDVgi~~ 240 (301)
T 1a4i_A 200 -A-HLDEEVNKGDILVVATGQ----PEMVKGEW----IKPG------------------AIVIDCGINY 240 (301)
T ss_dssp -S-SHHHHHTTCSEEEECCCC----TTCBCGGG----SCTT------------------CEEEECCCBC
T ss_pred -c-cHHHHhccCCEEEECCCC----cccCCHHH----cCCC------------------cEEEEccCCC
Confidence 0 012457789999999876 66899998 5788 9999999985
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.005 Score=67.12 Aligned_cols=78 Identities=21% Similarity=0.256 Sum_probs=63.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC----------------HHHHHHHHHHc----CCeeEEEeecCC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL----------------KEDIDKVTNEF----GRVEATLIDVNN 621 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~----------------~ekAe~La~~~----~~v~~v~lDV~D 621 (1201)
.+.|.++|.| +|.+|+.+++.|++. +.+|++++|+ .++++++++.. .++..+.+|++|
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQE-GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 4568999999 689999999999987 5789999887 67776665443 357888999998
Q ss_pred CCchHHHhhcc-------CCcEEEEcCCC
Q psy12817 622 GGSDNLSGLVR-------SADLVVSLLPY 643 (1201)
Q Consensus 622 ~~~e~L~elI~-------~~DVVIs~lP~ 643 (1201)
.+.++++++ ..|+|||+...
T Consensus 88 --~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 88 --YDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp --HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred --HHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 888887775 68999999853
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0012 Score=66.03 Aligned_cols=104 Identities=16% Similarity=0.135 Sum_probs=74.1
Q ss_pred CCeEEEEcC----chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGA----GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGA----G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++|+|+|+ |.+|..++++|.+. +++ |.+.++.++. ....+.+ + ..++.++-...|+++.+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~-G~~--v~~vnp~~~~---~~i~G~~-----~----~~sl~el~~~vDlavi~ 77 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQ-GYR--VLPVNPRFQG---EELFGEE-----A----VASLLDLKEPVDILDVF 77 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHT-TCE--EEEECGGGTT---SEETTEE-----C----BSSGGGCCSCCSEEEEC
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHC-CCE--EEEeCCCccc---CcCCCEE-----e----cCCHHHCCCCCCEEEEE
Confidence 579999998 89999999999876 456 5666665421 1122332 1 12455555689999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEc--cCChHHHHHHHHHHHHcCCEEEe
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTA--SYLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~--Syvs~e~~eLde~AkeAGVtil~ 686 (1201)
+|......+++.|++.|+..+-. +.. .+++.+.|+++|+.++.
T Consensus 78 vp~~~~~~v~~~~~~~gi~~i~~~~g~~---~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 78 RPPSALMDHLPEVLALRPGLVWLQSGIR---HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp SCHHHHTTTHHHHHHHCCSCEEECTTCC---CHHHHHHHHHTTCCEEE
T ss_pred eCHHHHHHHHHHHHHcCCCEEEEcCCcC---HHHHHHHHHHcCCEEEc
Confidence 99888888999999998864433 333 35666779999999873
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0044 Score=72.98 Aligned_cols=83 Identities=14% Similarity=0.290 Sum_probs=59.6
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+.-.+|+|+|.|.+|++..+.++.+| ++|.+++....+..... ..| |.. .
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafG----------------a~Viv~d~dp~~a~~A~-~~G--~~v----------v- 294 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAG----------------ARVKVTEVDPICALQAA-MDG--FEV----------V- 294 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT----------------CEEEEECSSHHHHHHHH-HTT--CEE----------C-
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCC----------------CEEEEEeCCcchhhHHH-hcC--cee----------c-
Confidence 44579999999999999999999999 55666765443322221 123 211 1
Q ss_pred hhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 273 LFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
.+ +++++.+||||++. ..+.+|+.+.++. ||+|
T Consensus 295 ~L-eElL~~ADIVv~at----gt~~lI~~e~l~~-MK~G 327 (464)
T 3n58_A 295 TL-DDAASTADIVVTTT----GNKDVITIDHMRK-MKDM 327 (464)
T ss_dssp CH-HHHGGGCSEEEECC----SSSSSBCHHHHHH-SCTT
T ss_pred cH-HHHHhhCCEEEECC----CCccccCHHHHhc-CCCC
Confidence 11 34677899999874 5678999999999 9999
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0039 Score=66.54 Aligned_cols=77 Identities=18% Similarity=0.284 Sum_probs=60.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+.|+++|.| +|.+|+.+++.|++. +.+|++.++ +.++++++.+.. .++..+.+|++| .++++++++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEE-GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD--ADEVKAMIKEVVSQ 79 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 357899999 799999999999987 578877766 667666665443 357788999998 888887776
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 80 ~g~id~lv~nAg~ 92 (246)
T 3osu_A 80 FGSLDVLVNNAGI 92 (246)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 68999999853
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0047 Score=67.39 Aligned_cols=79 Identities=16% Similarity=0.272 Sum_probs=61.6
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
+.+.|+++|.| +|.+|+.+++.|++. +.+|++.++ +.++++++.+.+ .++.++.+|++| .+.++++++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 104 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALE-GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD--AEAIEQAIRETV 104 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHH
Confidence 34568999999 699999999999987 578877754 556666655443 357789999998 888887776
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 105 ~~~g~iD~lvnnAg~ 119 (271)
T 3v2g_A 105 EALGGLDILVNSAGI 119 (271)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCcEEEECCCC
Confidence 78999999853
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0025 Score=68.43 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=61.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRD--ENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~--~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
+.|.++|.| +|.+|+.+++.|++. .+.+|++.+|+.++++++.+.+ .++.++.+|++| .++++++++
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~ 82 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT--EAGVQRLLSAV 82 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS--HHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC--HHHHHHHHHHH
Confidence 457889999 799999999999983 4689999999998887766543 246788899998 777776653
Q ss_pred -------CCc--EEEEcCCC
Q psy12817 633 -------SAD--LVVSLLPY 643 (1201)
Q Consensus 633 -------~~D--VVIs~lP~ 643 (1201)
..| +|||+...
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCC
T ss_pred HhccccccCCccEEEECCcc
Confidence 347 99999753
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0025 Score=67.99 Aligned_cols=78 Identities=13% Similarity=0.143 Sum_probs=59.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHH----HHHHc-CCeeEEEeecCCCCchHHHhhccC---
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDK----VTNEF-GRVEATLIDVNNGGSDNLSGLVRS--- 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~----La~~~-~~v~~v~lDV~D~~~e~L~elI~~--- 633 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++.++ +.+.. .++..+.+|++| .+.+++++++
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 88 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDA 88 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC--HHHHHHHHHHHHH
Confidence 3457899999 799999999999987 5789999996554433 32222 357888999998 7777776653
Q ss_pred ----CcEEEEcCCC
Q psy12817 634 ----ADLVVSLLPY 643 (1201)
Q Consensus 634 ----~DVVIs~lP~ 643 (1201)
.|+||++...
T Consensus 89 ~~~~id~li~~Ag~ 102 (265)
T 1h5q_A 89 DLGPISGLIANAGV 102 (265)
T ss_dssp HSCSEEEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 8999999853
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0038 Score=68.82 Aligned_cols=79 Identities=11% Similarity=0.291 Sum_probs=63.9
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDE--NIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~--~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
..+.|+++|.| +|.+|+.+++.|++.+ ..+|++++|+.++++++++.+ .++.++.+|++| .++++++++
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d--~~~v~~~~~ 107 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ--AEKIKPFIE 107 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC--GGGHHHHHH
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHH
Confidence 34568999999 6999999999998764 248999999999888776543 246788999998 888887776
Q ss_pred -------CCcEEEEcCC
Q psy12817 633 -------SADLVVSLLP 642 (1201)
Q Consensus 633 -------~~DVVIs~lP 642 (1201)
..|+|||+..
T Consensus 108 ~~~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 108 NLPQEFKDIDILVNNAG 124 (287)
T ss_dssp TSCGGGCSCCEEEECCC
T ss_pred HHHHhcCCCCEEEECCC
Confidence 4799999975
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0055 Score=67.59 Aligned_cols=78 Identities=15% Similarity=0.318 Sum_probs=62.1
Q ss_pred cCCCeEEEEcC-c--hhHHHHHHHHHhCCCCeEEEEeCCHHH---HHHHHHHcCCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLGA-G--YVSRPLIEYLHRDENIHITLGSLLKED---IDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILGA-G--~VG~~va~~La~~~~~~VtVadR~~ek---Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|+++|.|+ | .+|+.+++.|++. +.+|++++|+.+. ++++.+..+++.++.+|++| .++++++++
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~ 104 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSD--AESVDNMFKVLAE 104 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTC--HHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCC--HHHHHHHHHHHHH
Confidence 45689999995 4 9999999999987 5789999999754 34444455667889999998 888887775
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+|||+...
T Consensus 105 ~~g~iD~lVnnAG~ 118 (296)
T 3k31_A 105 EWGSLDFVVHAVAF 118 (296)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 57999999854
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0055 Score=67.55 Aligned_cols=78 Identities=13% Similarity=0.258 Sum_probs=62.2
Q ss_pred cCCCeEEEEcC-ch--hHHHHHHHHHhCCCCeEEEEeCCHHH---HHHHHHHcCCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLGA-GY--VSRPLIEYLHRDENIHITLGSLLKED---IDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILGA-G~--VG~~va~~La~~~~~~VtVadR~~ek---Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|+++|.|+ |. +|+.+++.|++. +.+|++.+|+.+. ++++.+..+++.++.+|++| .++++++++
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVAD--AASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCC--HHHHHHHHHHHHH
Confidence 45689999994 66 999999999987 5789999999643 34445555678889999998 888887765
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+|||+...
T Consensus 106 ~~g~iD~lVnnAG~ 119 (293)
T 3grk_A 106 KWGKLDFLVHAIGF 119 (293)
T ss_dssp HTSCCSEEEECCCC
T ss_pred hcCCCCEEEECCcc
Confidence 68999999864
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.00078 Score=73.02 Aligned_cols=78 Identities=12% Similarity=0.086 Sum_probs=51.8
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-Cee-EEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVE-ATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~-~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|||+|||+|.||..++..|.+. +++|++.+|+.++++++..... +.. .......+ .+.++++|+||.|+|.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~d~vi~~v~~ 73 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ-GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND------PDFLATSDLLLVTLKA 73 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC------HHHHHTCSEEEECSCG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC------ccccCCCCEEEEEecH
Confidence 5899999999999999999986 4689999999876544322110 110 01111222 2345689999999987
Q ss_pred cccHHHH
Q psy12817 644 NLHHHVA 650 (1201)
Q Consensus 644 ~~h~~Va 650 (1201)
.....++
T Consensus 74 ~~~~~v~ 80 (291)
T 1ks9_A 74 WQVSDAV 80 (291)
T ss_dssp GGHHHHH
T ss_pred HhHHHHH
Confidence 6544443
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0053 Score=67.54 Aligned_cols=79 Identities=15% Similarity=0.251 Sum_probs=60.8
Q ss_pred cccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHH---Hc-CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 561 QTEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTN---EF-GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 561 ~~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~---~~-~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
...+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++ .+.+.+ .. .++..+.+|++| .++++++++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~ 119 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKE-GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD--EQHCKDIVQET 119 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTS--HHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHH
Confidence 345678999999 699999999999987 5789999998653 333222 22 357788999998 888877765
Q ss_pred -----CCcEEEEcCC
Q psy12817 633 -----SADLVVSLLP 642 (1201)
Q Consensus 633 -----~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 120 ~~~~g~iD~lvnnAg 134 (291)
T 3ijr_A 120 VRQLGSLNILVNNVA 134 (291)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 6899999964
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0051 Score=66.61 Aligned_cols=78 Identities=14% Similarity=0.172 Sum_probs=61.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-LKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|+|+|.| +|.+|+.+++.|++. +.+|++.+| +.+..+.+.+.. .++..+.+|++| .+.+.++++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 103 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASM-GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAAS--ESDFIEAIQTIVQ 103 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHH
Confidence 4468899999 699999999999987 578999998 555555554432 357889999998 778777765
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
+.|+||++...
T Consensus 104 ~~g~id~li~nAg~ 117 (271)
T 4iin_A 104 SDGGLSYLVNNAGV 117 (271)
T ss_dssp HHSSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 68999999854
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0027 Score=72.00 Aligned_cols=68 Identities=19% Similarity=0.314 Sum_probs=51.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||+|.||+.+++.|... +.+|++.||+.++ + .+..+ ++.. . ++.++++++|+|+.++|
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~-G~~V~~~d~~~~~-~-~~~~~-g~~~-----~-----~l~e~l~~aDiVil~vp 209 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPF-GVKLYYWSRHRKV-N-VEKEL-KARY-----M-----DIDELLEKSDIVILALP 209 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG-TCEEEEECSSCCH-H-HHHHH-TEEE-----C-----CHHHHHHHCSEEEECCC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEECCCcch-h-hhhhc-Ccee-----c-----CHHHHHhhCCEEEEcCC
Confidence 4568999999999999999999876 5789999998875 2 22233 3321 1 25667789999999998
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 210 ~~ 211 (333)
T 2d0i_A 210 LT 211 (333)
T ss_dssp CC
T ss_pred CC
Confidence 75
|
| >2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0032 Score=70.73 Aligned_cols=108 Identities=10% Similarity=0.059 Sum_probs=77.4
Q ss_pred CCCeEEEE-cC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 564 ESRNVLLL-GA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 564 ~mkKVLIL-GA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
..++++|+ |+ |..|+.++++|.+. +++ .+++-++.+.. ....+++.. ..+.++.+ +.|+++.
T Consensus 12 ~~~siaVV~Gasg~~G~~~~~~l~~~-G~~-~v~~VnP~~~g---~~i~G~~vy---------~sl~el~~~~~vD~avI 77 (305)
T 2fp4_A 12 DKNTKVICQGFTGKQGTFHSQQALEY-GTN-LVGGTTPGKGG---KTHLGLPVF---------NTVKEAKEQTGATASVI 77 (305)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-TCE-EEEEECTTCTT---CEETTEEEE---------SSHHHHHHHHCCCEEEE
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHC-CCc-EEEEeCCCcCc---ceECCeeee---------chHHHhhhcCCCCEEEE
Confidence 35677777 96 99999999999876 466 33444443211 012233321 23555555 8999999
Q ss_pred cCCCcccHHHHHHHHHcCCeE-EEccC--ChHHHHHHHHHHHHc-CCEEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNL-VTASY--LSPEMMALHERAASA-GITVL 685 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~-VD~Sy--vs~e~~eLde~AkeA-GVtil 685 (1201)
++|...++++++.|+++|++. +..+. ...++.++.+.|+++ |+.++
T Consensus 78 ~vP~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~li 127 (305)
T 2fp4_A 78 YVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLI 127 (305)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEEE
T ss_pred ecCHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcEEE
Confidence 999999999999999999987 55553 345577898999999 99987
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0035 Score=70.45 Aligned_cols=77 Identities=18% Similarity=0.229 Sum_probs=62.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEe-CCHHHHHHHHHHc-----CCeeEEEeecCCCCch-----------
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGS-LLKEDIDKVTNEF-----GRVEATLIDVNNGGSD----------- 625 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVad-R~~ekAe~La~~~-----~~v~~v~lDV~D~~~e----------- 625 (1201)
+.|.|+|.| +|.+|+.+++.|++. +.+|++++ |+.++++++.+.+ .++.++.+|++| .+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~-G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 121 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN--VATAPVSGADGSA 121 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS--SCBCC-------C
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCC--chhcccccccccc
Confidence 457899999 799999999999987 57899999 9998887766543 257888999998 66
Q ss_pred ------HHHhhcc-------CCcEEEEcCCC
Q psy12817 626 ------NLSGLVR-------SADLVVSLLPY 643 (1201)
Q Consensus 626 ------~L~elI~-------~~DVVIs~lP~ 643 (1201)
.++++++ ..|+||++...
T Consensus 122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~ 152 (328)
T 2qhx_A 122 PVTLFTRCAELVAACYTHWGRCDVLVNNASS 152 (328)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred ccccHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 7776665 68999999853
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0023 Score=74.03 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=57.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeec------------------CCCCc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDV------------------NNGGS 624 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV------------------~D~~~ 624 (1201)
....||+|+|+|.+|..+++.+...+ .+|+++||+.++++.+.+ + +.+++.+++ .+ .
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~-l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~--~ 256 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRS-V-GAQWLDLGIDAAGEGGYARELSEAERAQQ--Q 256 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHH-T-TCEECCCC-------------CHHHHHHH--H
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-c-CCeEEeccccccccccchhhhhHHHHhhh--H
Confidence 45689999999999999999998764 689999999998887665 3 444433221 11 3
Q ss_pred hHHHhhccCCcEEEEcC
Q psy12817 625 DNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 625 e~L~elI~~~DVVIs~l 641 (1201)
+.+.+.++++|+||+++
T Consensus 257 ~~l~e~l~~aDIVI~tv 273 (381)
T 3p2y_A 257 QALEDAITKFDIVITTA 273 (381)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHHhcCCEEEECC
Confidence 46788999999999986
|
| >3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0035 Score=73.74 Aligned_cols=122 Identities=12% Similarity=0.168 Sum_probs=75.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHh-----------hccC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSG-----------LVRS 633 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~e-----------lI~~ 633 (1201)
..|..|||+|+||.+++..|++. +++|++.|+++++++.+.+....+ . +.. -.+-+++ -+++
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~~kv~~L~~g~~pi--~--epg--l~~ll~~~~~~g~l~~ttd~~~ 83 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQQTIDKLQNGQISI--E--EPG--LQEVYEEVLSSGKLKVSTTPEA 83 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTCCSS--C--CTT--HHHHHHHHHHTTCEEEESSCCC
T ss_pred CCccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHCCCCCc--C--CCC--HHHHHHhhcccCceEEeCchhh
Confidence 35899999999999999999987 589999999999999988642100 0 000 0000000 0347
Q ss_pred CcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHH
Q psy12817 634 ADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMEC 702 (1201)
Q Consensus 634 ~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~ 702 (1201)
+|+||.|+|...+.. +....|++|+....+.+.+. -+.|..++.+.++.||...-++..+
T Consensus 84 aDvvii~VpTp~~~~--------~~~~~Dl~~V~~~~~~i~~~-l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 84 SDVFIIAVPTPNNDD--------QYRSCDISLVMRALDSILPF-LKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp CSEEEECCCCCBCSS--------SSCBBCCHHHHHHHHHHGGG-CCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred CCEEEEEeCCCcccc--------ccCCccHHHHHHHHHHHHHh-CCCCCEEEEecCCChhHHHHHHHHH
Confidence 999999998765311 00123444433333333221 1346677788889998765554433
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.63 E-value=0.003 Score=67.77 Aligned_cols=77 Identities=14% Similarity=0.250 Sum_probs=59.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
..|++|+|.| +|.+|+.+++.|++. +.+|++.+|+ .+..+.+.+.. .++.++.+|++| .+++.++++
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 81 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAK-GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK--KEDLHKIVEEAMS 81 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence 3578899999 699999999999987 5788887665 44444444332 357889999998 888887776
Q ss_pred ---CCcEEEEcCC
Q psy12817 633 ---SADLVVSLLP 642 (1201)
Q Consensus 633 ---~~DVVIs~lP 642 (1201)
..|+||++..
T Consensus 82 ~~g~id~lv~~Ag 94 (264)
T 3i4f_A 82 HFGKIDFLINNAG 94 (264)
T ss_dssp HHSCCCEEECCCC
T ss_pred HhCCCCEEEECCc
Confidence 7899999986
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0015 Score=75.73 Aligned_cols=94 Identities=19% Similarity=0.274 Sum_probs=64.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEE-EE-eCCHHHHHHHHHHcCC----------eeEEEeecCCCCchHHHhh
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHIT-LG-SLLKEDIDKVTNEFGR----------VEATLIDVNNGGSDNLSGL 630 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~Vt-Va-dR~~ekAe~La~~~~~----------v~~v~lDV~D~~~e~L~el 630 (1201)
+|+||.|+| +|++|+.+++.|.+++.++++ +. +++ +.-+.+.+.++. ......+... + +.
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~-saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~---~---~~ 90 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSR-SAGKKYKDAASWKQTETLPETEQDIVVQECKP---E---GN 90 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTT-TTTSBHHHHCCCCCSSCCCHHHHTCBCEESSS---C---TT
T ss_pred CccEEEEECCCChHHHHHHHHHHcCCCceEEEeecccc-ccCCCHHHhcccccccccccccccceEEeCch---h---hh
Confidence 357899999 699999999999999888875 43 332 222223222211 0001111211 1 02
Q ss_pred ccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 631 VRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 631 I~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
++++|+|+.|+|.....+++..++++|+.+||.|
T Consensus 91 ~~~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlS 124 (381)
T 3hsk_A 91 FLECDVVFSGLDADVAGDIEKSFVEAGLAVVSNA 124 (381)
T ss_dssp GGGCSEEEECCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred cccCCEEEECCChhHHHHHHHHHHhCCCEEEEcC
Confidence 4689999999998888899999999999999986
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0015 Score=74.31 Aligned_cols=90 Identities=20% Similarity=0.180 Sum_probs=61.6
Q ss_pred CCeEEEEc-CchhHHHHHHHHH--hCCCCeEEEE-eCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLH--RDENIHITLG-SLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La--~~~~~~VtVa-dR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
++||+|+| +|++|+.+++.|. ..+.++++.+ ++.... +.+ .+.+.. +++.+ .+ . +.++++|+|+.|
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g-~~~--~~~g~~---i~~~~--~~-~-~~~~~~DvV~~a 75 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG-QRM--GFAESS---LRVGD--VD-S-FDFSSVGLAFFA 75 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT-CEE--EETTEE---EECEE--GG-G-CCGGGCSEEEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCC-Ccc--ccCCcc---eEEec--CC-H-HHhcCCCEEEEc
Confidence 37999999 7999999999998 4466776544 443110 000 021211 22222 11 1 125689999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|...+.+.+..++++|+.+||.|
T Consensus 76 ~g~~~s~~~a~~~~~aG~kvId~S 99 (340)
T 2hjs_A 76 AAAEVSRAHAERARAAGCSVIDLS 99 (340)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETT
T ss_pred CCcHHHHHHHHHHHHCCCEEEEeC
Confidence 998888999999999999999986
|
| >2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0033 Score=69.19 Aligned_cols=80 Identities=10% Similarity=0.047 Sum_probs=55.5
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCC----C-CeEEEEeCCHHHHHHHHHHcCCeeEEE---------eecCCCCchHHHh
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDE----N-IHITLGSLLKEDIDKVTNEFGRVEATL---------IDVNNGGSDNLSG 629 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~----~-~~VtVadR~~ekAe~La~~~~~v~~v~---------lDV~D~~~e~L~e 629 (1201)
++|||+|||+|.||..++..|.+.+ + .+|++.+| .++++.+.++. ++.... +.+.+ .. +
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~----~~-~ 79 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAG-GLRVVTPSRDFLARPTCVTD----NP-A 79 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHT-SEEEECSSCEEEECCSEEES----CH-H
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcC-CeEEEeCCCCeEEecceEec----Cc-c
Confidence 3469999999999999999998761 4 78999999 78888877622 333211 11112 11 2
Q ss_pred hccCCcEEEEcCCCcccHHHH
Q psy12817 630 LVRSADLVVSLLPYNLHHHVA 650 (1201)
Q Consensus 630 lI~~~DVVIs~lP~~~h~~Va 650 (1201)
.++++|+||.|+|......++
T Consensus 80 ~~~~~D~vil~vk~~~~~~v~ 100 (317)
T 2qyt_A 80 EVGTVDYILFCTKDYDMERGV 100 (317)
T ss_dssp HHCCEEEEEECCSSSCHHHHH
T ss_pred ccCCCCEEEEecCcccHHHHH
Confidence 357899999999876544444
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0042 Score=67.20 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=61.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
+++.|+|.| +|.+|+.+++.|++. +.+|++. +|+.++++++.+.. +++..+.+|++| .++++++++
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQ-GWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN--AADIAAMFSAVDRQ 101 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 357899999 799999999999987 5777665 88888777766543 357888999998 788877765
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 102 ~g~id~li~nAg~ 114 (272)
T 4e3z_A 102 FGRLDGLVNNAGI 114 (272)
T ss_dssp HSCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 57999999753
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0067 Score=66.89 Aligned_cols=77 Identities=21% Similarity=0.280 Sum_probs=62.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHc----CCeeEEEeecCCCCch
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL------------KEDIDKVTNEF----GRVEATLIDVNNGGSD 625 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~------------~ekAe~La~~~----~~v~~v~lDV~D~~~e 625 (1201)
.+.|.++|.| +|.+|+.+++.|++. +.+|++++|+ .++++++.+.. .++.++.+|++| .+
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~ 102 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLARE-GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD--FD 102 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC--HH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC--HH
Confidence 4568999999 689999999999987 5789999887 66666554432 357889999998 88
Q ss_pred HHHhhcc-------CCcEEEEcCC
Q psy12817 626 NLSGLVR-------SADLVVSLLP 642 (1201)
Q Consensus 626 ~L~elI~-------~~DVVIs~lP 642 (1201)
+++++++ ..|+||++..
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCC
Confidence 8887775 6899999975
|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.028 Score=64.23 Aligned_cols=92 Identities=15% Similarity=0.187 Sum_probs=69.0
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|.|+|.|+.|+...+.++.+|+ ++.+|+..... .. .++ . .|.
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~----------------~V~~~d~~~~~--~~---~~~-~----------~~~ 192 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGA----------------KVIAYDVAYNP--EF---EPF-L----------TYT 192 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC----------------EEEEECSSCCG--GG---TTT-C----------EEC
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCC----------------EEEEECCChhh--hh---hcc-c----------ccc
Confidence 4666899999999999999999999984 45566544321 01 111 0 111
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
.+ +++++.+|+|+.++--.+.+-.+|..+.++. |||| ++++|+|
T Consensus 193 -~l-~ell~~aDvV~l~~Plt~~t~~li~~~~l~~-mk~g------------------ailIN~a 236 (343)
T 2yq5_A 193 -DF-DTVLKEADIVSLHTPLFPSTENMIGEKQLKE-MKKS------------------AYLINCA 236 (343)
T ss_dssp -CH-HHHHHHCSEEEECCCCCTTTTTCBCHHHHHH-SCTT------------------CEEEECS
T ss_pred -CH-HHHHhcCCEEEEcCCCCHHHHHHhhHHHHhh-CCCC------------------cEEEECC
Confidence 11 3467789999999998888889999999999 9999 8999998
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0041 Score=70.48 Aligned_cols=87 Identities=17% Similarity=0.259 Sum_probs=61.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||+|.||+.+++.|... +.+|++.||+.++ +. +..+ ++.. . ++.++++++|+|+.++|
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~~~~~-~~-~~~~-g~~~-----~-----~l~~~l~~aDvVil~vp 213 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGF-NMRILYYSRTRKE-EV-EREL-NAEF-----K-----PLEDLLRESDFVVLAVP 213 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCH-HH-HHHH-CCEE-----C-----CHHHHHHHCSEEEECCC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhC-CCEEEEECCCcch-hh-Hhhc-Cccc-----C-----CHHHHHhhCCEEEECCC
Confidence 4568999999999999999999876 5789999998876 32 2233 3321 1 35667789999999998
Q ss_pred Cccc------HHHHHHHHHcCCeEEEcc
Q psy12817 643 YNLH------HHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h------~~VakacIeaGkh~VD~S 664 (1201)
.... ..+ ...++.|.-+++++
T Consensus 214 ~~~~t~~~i~~~~-~~~mk~~ailIn~s 240 (334)
T 2dbq_A 214 LTRETYHLINEER-LKLMKKTAILINIA 240 (334)
T ss_dssp CCTTTTTCBCHHH-HHHSCTTCEEEECS
T ss_pred CChHHHHhhCHHH-HhcCCCCcEEEECC
Confidence 6531 122 23456677777775
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0073 Score=64.93 Aligned_cols=78 Identities=13% Similarity=0.210 Sum_probs=60.4
Q ss_pred cCCCeEEEEc-Cch--hHHHHHHHHHhCCCCeEEEEeCCHHH---HHHHHHHcC--CeeEEEeecCCCCchHHHhhcc--
Q psy12817 563 EESRNVLLLG-AGY--VSRPLIEYLHRDENIHITLGSLLKED---IDKVTNEFG--RVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~--VG~~va~~La~~~~~~VtVadR~~ek---Ae~La~~~~--~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
.+.++|+|.| +|. +|+.+++.|++. +.+|++.+|+.+. ++++.+.++ ++.++.+|++| .++++++++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~ 81 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN--DAEIETCFASI 81 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS--SHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC--HHHHHHHHHHH
Confidence 3468999999 577 999999999987 5789999998643 344444443 47889999998 778877765
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 82 ~~~~g~id~li~~Ag~ 97 (266)
T 3oig_A 82 KEQVGVIHGIAHCIAF 97 (266)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCeeEEEEcccc
Confidence 57999999753
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0038 Score=67.59 Aligned_cols=77 Identities=17% Similarity=0.330 Sum_probs=62.4
Q ss_pred CCCeEEEEc---CchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHHcC-CeeEEEeecCCCCchHHHhhcc------
Q psy12817 564 ESRNVLLLG---AGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 564 ~mkKVLILG---AG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~~~-~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++ ++++.+.++ ++.++.+|++| .+.++++++
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~ 82 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN--EEHLASLAGRVTEAI 82 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHhcCCCceEEEccCCC--HHHHHHHHHHHHHHh
Confidence 457899999 489999999999987 5789999999866 466666553 46788999998 888887776
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 83 g~~~~iD~lv~nAg~ 97 (269)
T 2h7i_A 83 GAGNKLDGVVHSIGF 97 (269)
T ss_dssp CTTCCEEEEEECCCC
T ss_pred CCCCCceEEEECCcc
Confidence 78999999753
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0051 Score=66.40 Aligned_cols=78 Identities=22% Similarity=0.189 Sum_probs=61.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEE-EeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITL-GSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtV-adR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.++|+|.| +|.+|+.+++.|++. +.+|++ .+|+.+++++..+.+ +++.++.+|++| .+++.++++
T Consensus 24 l~~k~vlVTGas~gIG~~la~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 24 AMSRSVLVTGASKGIGRAIARQLAAD-GFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVAN--REQCREVLEHEIA 100 (267)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence 3457899999 699999999999987 467654 678887776655443 468889999998 888877775
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+||++...
T Consensus 101 ~~g~id~li~nAg~ 114 (267)
T 4iiu_A 101 QHGAWYGVVSNAGI 114 (267)
T ss_dssp HHCCCSEEEECCCC
T ss_pred HhCCccEEEECCCC
Confidence 68999999753
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0039 Score=66.83 Aligned_cols=76 Identities=13% Similarity=0.223 Sum_probs=58.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH--HHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED--IDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek--Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
+.|+|+|.| +|.+|+.+++.|++. +.+|++.+|+.++ ++++...-.++..+.+|++| .+.++++++ +
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~ 79 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARA-GANIVLNGFGDPAPALAEIARHGVKAVHHPADLSD--VAQIEALFALAEREFGG 79 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTS--HHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCC--HHHHHHHHHHHHHHcCC
Confidence 457899999 699999999999987 5789999998651 22332212346778899998 888888877 7
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
.|+||++..
T Consensus 80 id~lv~~Ag 88 (255)
T 2q2v_A 80 VDILVNNAG 88 (255)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999975
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0049 Score=72.37 Aligned_cols=90 Identities=17% Similarity=0.257 Sum_probs=66.1
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+.-.+|+|+|.|++|++..+.++.+| ++|.+|+....+...... .|..+.
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~G----------------a~Viv~D~~p~~a~~A~~-~G~~~~------------- 258 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGFG----------------ARVVVTEVDPINALQAAM-EGYQVL------------- 258 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT----------------CEEEEECSCHHHHHHHHH-TTCEEC-------------
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHCC----------------CEEEEECCChhhhHHHHH-hCCeec-------------
Confidence 44579999999999999999999999 456677665433322222 232111
Q ss_pred hhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 273 LFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
. .++.++.+||||.+ ...+.+|+.++++. ||+| ++|++++
T Consensus 259 s-L~eal~~ADVVilt----~gt~~iI~~e~l~~-MK~g------------------AIVINvg 298 (436)
T 3h9u_A 259 L-VEDVVEEAHIFVTT----TGNDDIITSEHFPR-MRDD------------------AIVCNIG 298 (436)
T ss_dssp C-HHHHTTTCSEEEEC----SSCSCSBCTTTGGG-CCTT------------------EEEEECS
T ss_pred C-HHHHHhhCCEEEEC----CCCcCccCHHHHhh-cCCC------------------cEEEEeC
Confidence 1 23578899999974 46778999999999 9999 9999997
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0046 Score=67.77 Aligned_cols=77 Identities=14% Similarity=0.225 Sum_probs=60.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH-------HHH----HHHHcCCeeEEEeecCCCCchHHHhhc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED-------IDK----VTNEFGRVEATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek-------Ae~----La~~~~~v~~v~lDV~D~~~e~L~elI 631 (1201)
+.|.++|.| +|.+|+.+++.|++. +.+|++++|+.++ +++ +...-.++.++.+|++| .+++++++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~ 84 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAAD-GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD--GDAVAAAV 84 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTT-TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS--HHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHH
Confidence 458899999 699999999999987 5789999998752 333 22222457888999998 88888777
Q ss_pred c-------CCcEEEEcCCC
Q psy12817 632 R-------SADLVVSLLPY 643 (1201)
Q Consensus 632 ~-------~~DVVIs~lP~ 643 (1201)
+ ..|++||+...
T Consensus 85 ~~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 6 78999999753
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0038 Score=71.48 Aligned_cols=89 Identities=15% Similarity=0.238 Sum_probs=62.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|||.|.||+.+++.|... +.+|++.||+....+.... . ++.. .++++++++++|+|+.++|
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~~~~-~-g~~~---------~~~l~ell~~aDvV~l~~P 229 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPF-GCNLLYHDRLQMAPELEKE-T-GAKF---------VEDLNEMLPKCDVIVINMP 229 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG-CCEEEEECSSCCCHHHHHH-H-CCEE---------CSCHHHHGGGCSEEEECSC
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHC-CCEEEEeCCCccCHHHHHh-C-CCeE---------cCCHHHHHhcCCEEEECCC
Confidence 4568999999999999999999876 5789999998644433322 2 3332 1258889999999999999
Q ss_pred Cc------ccHHHHHHHHHcCCeEEEcc
Q psy12817 643 YN------LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~------~h~~VakacIeaGkh~VD~S 664 (1201)
.. +.... -..++.|.-+|+++
T Consensus 230 lt~~t~~li~~~~-l~~mk~gailIN~a 256 (351)
T 3jtm_A 230 LTEKTRGMFNKEL-IGKLKKGVLIVNNA 256 (351)
T ss_dssp CCTTTTTCBSHHH-HHHSCTTEEEEECS
T ss_pred CCHHHHHhhcHHH-HhcCCCCCEEEECc
Confidence 53 11222 23345666667665
|
| >1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.011 Score=67.42 Aligned_cols=97 Identities=19% Similarity=0.194 Sum_probs=65.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC--CCCeEEEE-eC-CHHHHHHHHHH------cC-Cee-----E--------EEeecC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD--ENIHITLG-SL-LKEDIDKVTNE------FG-RVE-----A--------TLIDVN 620 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~--~~~~VtVa-dR-~~ekAe~La~~------~~-~v~-----~--------v~lDV~ 620 (1201)
|.||+|+|+|++|+.+++.|.++ +.++|+.+ |. +.+....+.+. +. .+. . ..+...
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 46999999999999999999988 78886544 33 33333232211 10 011 0 111112
Q ss_pred CCCchHHHhhcc--CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 621 NGGSDNLSGLVR--SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 621 D~~~e~L~elI~--~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
| ++.+. .+ ++|+|+.|+|.....+.+...+++|+..|+.|-
T Consensus 81 d--p~~i~--w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSa 123 (337)
T 1rm4_O 81 N--PVNLP--WGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITA 123 (337)
T ss_dssp C--GGGSC--HHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESS
T ss_pred C--hhhCc--ccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECC
Confidence 2 33221 12 799999999999999999999999999999874
|
| >2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0019 Score=69.36 Aligned_cols=70 Identities=13% Similarity=0.151 Sum_probs=52.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCC---CeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDEN---IHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~---~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
++||+|||+|.||..++..|.+.+. .+|++.||++++ + ++.. .+ ...+.++++|+||.|+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-------~-g~~~-----~~----~~~~~~~~~D~vi~~v 66 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-------T-TLNY-----MS----SNEELARHCDIIVCAV 66 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-------S-SSEE-----CS----CHHHHHHHCSEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-------C-ceEE-----eC----CHHHHHhcCCEEEEEe
Confidence 5799999999999999999987642 579999999765 2 3332 21 2445667899999999
Q ss_pred CCcccHHHHH
Q psy12817 642 PYNLHHHVAE 651 (1201)
Q Consensus 642 P~~~h~~Vak 651 (1201)
|......+++
T Consensus 67 ~~~~~~~v~~ 76 (262)
T 2rcy_A 67 KPDIAGSVLN 76 (262)
T ss_dssp CTTTHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9765555554
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0068 Score=65.85 Aligned_cols=78 Identities=19% Similarity=0.252 Sum_probs=62.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC-------------CHHHHHHHHHHc----CCeeEEEeecCCCCc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL-------------LKEDIDKVTNEF----GRVEATLIDVNNGGS 624 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR-------------~~ekAe~La~~~----~~v~~v~lDV~D~~~ 624 (1201)
.+.|.++|.| +|.+|+.+++.|++. +.+|++++| +.++++++.+.. .++..+.+|++| .
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~ 85 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAE-GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD--F 85 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC--H
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC--H
Confidence 4568899999 699999999999987 578999988 677666655432 357888999998 8
Q ss_pred hHHHhhcc-------CCcEEEEcCCC
Q psy12817 625 DNLSGLVR-------SADLVVSLLPY 643 (1201)
Q Consensus 625 e~L~elI~-------~~DVVIs~lP~ 643 (1201)
+.++++++ ..|+|||+...
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 88887765 48999999853
|
| >1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.021 Score=64.68 Aligned_cols=92 Identities=14% Similarity=0.109 Sum_probs=67.7
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+...+|.|+|.|+.|+...+.++.+|+ ++.+|+...... .+ . + . .|.
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~----------------~V~~~d~~~~~~--~~---~--~--~-------~~~ 190 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGA----------------TVIGEDVFEIKG--IE---D--Y--C-------TQV 190 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC----------------EEEEECSSCCCS--CT---T--T--C-------EEC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC----------------EEEEECCCccHH--HH---h--c--c-------ccC
Confidence 5677899999999999999999999984 355555432111 00 0 0 0 111
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeec
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDIS 336 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS 336 (1201)
+ .+++++.+|+|+.+.--.+.+..+|+++.++. |||| ++++|+|
T Consensus 191 ~--l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~-mk~g------------------a~lin~s 234 (331)
T 1xdw_A 191 S--LDEVLEKSDIITIHAPYIKENGAVVTRDFLKK-MKDG------------------AILVNCA 234 (331)
T ss_dssp C--HHHHHHHCSEEEECCCCCTTTCCSBCHHHHHT-SCTT------------------EEEEECS
T ss_pred C--HHHHHhhCCEEEEecCCchHHHHHhCHHHHhh-CCCC------------------cEEEECC
Confidence 1 12456789999999888778888999999988 9999 9999998
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1201 | ||||
| d1e5qa2 | 267 | d.81.1.2 (A:125-391) Saccharopine reductase {Rice | 5e-64 | |
| d1e5qa2 | 267 | d.81.1.2 (A:125-391) Saccharopine reductase {Rice | 2e-22 | |
| d1e5qa1 | 182 | c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase | 1e-16 | |
| d1e5qa1 | 182 | c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase | 2e-04 | |
| d1pjca2 | 193 | c.23.12.2 (A:1-135,A:304-361) L-alanine dehydrogen | 4e-11 |
| >d1e5qa2 d.81.1.2 (A:125-391) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FwdE/GAPDH domain-like superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain family: Homoserine dehydrogenase-like domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 216 bits (551), Expect = 5e-64
Identities = 92/231 (39%), Positives = 135/231 (58%), Gaps = 11/231 (4%)
Query: 690 LDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLNTL 749
LDPGIDHL A++ I+ H GGK+++F+SYCGGLPAPE S+NPL YKFSWS RGVLL
Sbjct: 1 LDPGIDHLYAIKTIEEVHAAGGKIKTFLSYCGGLPAPESSDNPLGYKFSWSSRGVLLALR 60
Query: 750 SSAKYLQNSQVVDIPAGGELMRTARPLDFLPGFSFEGFANRDSLRYAQLYNIAAEAHTVV 809
++A + ++ +V ++ G ELM TA+P PGF+F + NRDS Y + Y I EA +V
Sbjct: 61 NAASFYKDGKVTNVA-GPELMATAKPYFIYPGFAFVAYPNRDSTPYKERYQI-PEADNIV 118
Query: 810 RGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWRELVCTLLGLSTSD---IFYE 866
RGTLRY+GF ++ + +G L +E P L + P W+E ++ S++ I
Sbjct: 119 RGTLRYQGFPQFIKVLVDIGFLSDEEQPFLKEAIP---WKEATQKIVKASSASEQDIVST 175
Query: 867 NLKNIVADKVGNTG--LEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLN 915
+ N + + L+ LG+ +D I + +DTL L +K+
Sbjct: 176 IVSNATFESTEEQKRIVAGLKWLGIFSDKKIT-PRGNALDTLCATLEEKMQ 225
|
| >d1e5qa2 d.81.1.2 (A:125-391) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FwdE/GAPDH domain-like superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain family: Homoserine dehydrogenase-like domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 96.2 bits (239), Expect = 2e-22
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 1021 QELPYEELVCTLLGLSTSD---IFYENLKNIVADKVGNTG--LEALEALGLLNDDIIVQK 1075
+ +P++E ++ S++ I + N + + L+ LG+ +D I
Sbjct: 150 EAIPWKEATQKIVKASSASEQDIVSTIVSNATFESTEEQKRIVAGLKWLGIFSDKKIT-P 208
Query: 1076 QNTPIDTLSHFLRQKLVLDDGDRDVIVLRHDIDILWPNRSRERKSISLVVYGQPNGT 1132
+ +DTL L +K+ ++G+RD+++L+H +I + SRE ++ SL YG P G+
Sbjct: 209 RGNALDTLCATLEEKMQFEEGERDLVMLQHKFEIENKDGSRETRTSSLCEYGAPIGS 265
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 77.0 bits (188), Expect = 1e-16
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGS 624
+++VL+LG+G+V+RP ++ L D I +T+ E K++ +DVN+
Sbjct: 2 TKSVLMLGSGFVTRPTLDVLT-DSGIKVTVACRTLESAKKLSAGVQHSTPISLDVND--D 58
Query: 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITV 684
L V DLV+SL+PY H V + I+ K++VT SY+SP MM L + A AGITV
Sbjct: 59 AALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITV 118
Query: 685 LNEVGLDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSE--NPL 733
+NE+G + + + G + G+ AP S+ +PL
Sbjct: 119 MNEIGYSAMAKLVGVPCAVAVKFVLDGTIS-----DRGVLAPMNSKINDPL 164
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 463 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKDKFISFVQSDASKPIEEHNF 522
+++VL+LG+G+V+RP ++ L D I +T+ + +
Sbjct: 2 TKSVLMLGSGFVTRPTLDVLT-DSGIKVTVA-----CRTLESAKKLSAGVQHSTPISLDV 55
Query: 523 SP 524
+
Sbjct: 56 ND 57
|
| >d1pjca2 c.23.12.2 (A:1-135,A:304-361) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Length = 193 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: L-alanine dehydrogenase-like domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Score = 61.2 bits (148), Expect = 4e-11
Identities = 30/191 (15%), Positives = 67/191 (35%), Gaps = 20/191 (10%)
Query: 5 IAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQ--PSNRRAYPVQAYANAGAIIQEDI 62
I + +E ++ E R L+PS+V+ LV +G V ++ + Q Y AGA +
Sbjct: 3 IGVPKEIKN-QEFRVGLSPSSVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSA 61
Query: 63 SE---ASIIFGVKQVP---VDLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYE 116
+ ++ VK+ DL+ ++ + H A+E L+ + + YE
Sbjct: 62 KDAWSREMVVKVKEPLPAEYDLMQKDQLLFTYLHLAAARELTEQLMR----VGLTAIAYE 117
Query: 117 KLVDDEGNR--VVAFGKYAGVAGMVNILHGLGLRLLALGHH-----TPFMHIGPAHNYRN 169
+ + + + + ++ L + + N +
Sbjct: 118 TVELPNRSLPLLTPMSIIVPWTATQALNNSTLPYVVKLANQGLKALETDDALAKGLNVQA 177
Query: 170 SMMARQAIRDA 180
+ A++
Sbjct: 178 HRLVHPAVQQV 188
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1201 | |||
| d1e5qa2 | 267 | Saccharopine reductase {Rice blast fungus (Magnapo | 100.0 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 100.0 | |
| d1l7da2 | 194 | Nicotinamide nucleotide transhydrogenase dI compon | 99.97 | |
| d1pjca2 | 193 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 99.96 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 99.96 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 99.53 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 99.27 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 99.05 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 98.99 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 98.96 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 98.92 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 98.9 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 98.86 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 98.82 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.73 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 98.73 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 98.7 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 98.69 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.57 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 98.49 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 98.46 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 98.44 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 98.42 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.36 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 98.25 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 98.21 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 98.06 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 98.04 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 97.99 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.97 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.96 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 97.93 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.92 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.82 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 97.75 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.72 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 97.64 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.63 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 97.61 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 97.6 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 97.6 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.58 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.57 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.55 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 97.55 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 97.54 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.5 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 97.44 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 97.44 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 97.44 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 97.4 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.36 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 97.35 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 97.33 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 97.33 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.27 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.26 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.26 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.22 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 97.18 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.15 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.15 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 97.14 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.13 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.1 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 97.07 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.05 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 97.03 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 97.03 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 97.02 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 97.01 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.01 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 97.0 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 96.99 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 96.98 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 96.97 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.95 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.93 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 96.93 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 96.91 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 96.9 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.9 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 96.88 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.87 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 96.86 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 96.86 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 96.85 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.84 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.83 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 96.83 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 96.83 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.79 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 96.79 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 96.78 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 96.78 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.76 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 96.75 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 96.74 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 96.74 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 96.73 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 96.72 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.69 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.67 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 96.67 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 96.66 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 96.66 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 96.65 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 96.64 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 96.64 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 96.64 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 96.63 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 96.63 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 96.62 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 96.62 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.6 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 96.58 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 96.53 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.52 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 96.44 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 96.43 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 96.42 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 96.39 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 96.39 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.39 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 96.39 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.32 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.31 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 96.29 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 96.29 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 96.24 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.22 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 96.18 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 96.18 | |
| d1ebfa1 | 168 | Homoserine dehydrogenase {Baker's yeast (Saccharom | 96.15 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 96.13 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 96.11 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 96.08 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.07 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 96.05 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.02 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 96.01 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.0 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 95.99 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 95.98 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 95.98 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.98 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 95.98 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 95.97 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 95.96 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 95.95 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 95.95 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 95.94 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 95.93 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 95.92 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 95.91 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 95.89 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.88 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.87 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 95.85 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 95.78 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.77 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 95.74 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 95.74 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.73 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 95.72 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 95.7 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 95.69 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.69 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.66 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 95.65 | |
| d1e5qa2 | 267 | Saccharopine reductase {Rice blast fungus (Magnapo | 95.61 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 95.57 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 95.5 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 95.49 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 95.49 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 95.47 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.46 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.45 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 95.41 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.39 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 95.37 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 95.31 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 95.29 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 95.21 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 95.2 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 95.19 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 95.1 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 95.1 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 95.09 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 95.07 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 95.06 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 95.06 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 94.93 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 94.89 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 94.88 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 94.83 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 94.81 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 94.81 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 94.76 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 94.76 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 94.62 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 94.61 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 94.53 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 94.43 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 94.39 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.25 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 94.22 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 94.2 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 94.15 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 94.14 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 94.07 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 94.07 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 94.06 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 93.89 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 93.75 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.75 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 93.66 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 93.51 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.44 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 93.42 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 93.41 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 93.36 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 93.33 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.22 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.21 | |
| d3cmco1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.21 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 93.18 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 92.78 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 92.66 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 92.53 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 92.43 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 92.43 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 92.09 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 91.92 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 91.91 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 91.84 | |
| d1gr0a1 | 243 | Myo-inositol 1-phosphate synthase {Mycobacterium t | 91.79 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 91.72 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 91.71 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 91.63 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 91.58 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 91.53 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 91.48 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 91.39 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 91.14 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 91.11 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 91.09 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.93 | |
| d1rm4a1 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.93 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 90.92 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 90.88 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 90.72 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 90.69 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 90.68 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 90.64 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 90.49 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 90.33 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 90.32 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.14 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 90.02 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 89.88 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 89.84 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 89.73 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 89.44 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 89.32 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 89.29 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 89.16 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 89.11 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 88.95 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.89 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 88.84 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 88.74 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 88.71 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 88.34 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 87.79 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 87.6 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 87.49 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 87.19 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 87.14 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 86.86 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 86.85 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 86.8 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 86.79 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 86.76 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 86.6 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 86.52 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 86.48 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 86.36 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 86.25 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 85.97 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 85.56 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 85.47 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 85.39 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 85.31 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 85.13 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 85.08 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 84.96 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 84.9 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 84.57 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 84.54 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 84.35 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 84.31 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 84.2 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 84.07 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 83.79 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 83.47 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 83.37 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 83.26 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 82.97 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 82.93 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 82.77 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 82.75 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 82.51 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 82.34 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 81.98 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 81.97 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 81.59 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 81.59 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 81.31 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 81.29 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 81.17 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 80.66 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 80.52 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 80.4 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 80.32 |
| >d1e5qa2 d.81.1.2 (A:125-391) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FwdE/GAPDH domain-like superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain family: Homoserine dehydrogenase-like domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=3.9e-65 Score=558.78 Aligned_cols=265 Identities=39% Similarity=0.744 Sum_probs=235.2
Q ss_pred cCchhHHHHHHHHHHHhhhcCCcEEEEEeecCCCCCCCCCCCccccccccChHHHHHHhccceeeeeCCeEEEecCCccc
Q psy12817 690 LDPGIDHLLAMECIDAAHLNGGKVESFVSYCGGLPAPECSENPLRYKFSWSPRGVLLNTLSSAKYLQNSQVVDIPAGGEL 769 (1201)
Q Consensus 690 lDPGIdhmlA~~~idei~~~ggkV~sf~s~cGGLPaPe~~~nPL~YkfSWSp~gvL~a~~~~A~~l~dG~~v~Vp~~~~l 769 (1201)
||||||||+||++|+++++.||+|++|.|||||||+|++++|||+|||||||++||++++++|+|++||+.++|++. ++
T Consensus 1 LdPGidhm~A~~~i~~~~~~~g~i~~f~s~cGGLp~p~~~~np~~YkfsWsp~gvi~~~~~~A~~~~~G~~~~v~~~-~~ 79 (267)
T d1e5qa2 1 LDPGIDHLYAIKTIEEVHAAGGKIKTFLSYCGGLPAPESSDNPLGYKFSWSSRGVLLALRNAASFYKDGKVTNVAGP-EL 79 (267)
T ss_dssp BTTBHHHHHHHHHHHHHHHTTCEEEEEEEEEEEEECGGGCCSTTSCCBSSCHHHHHHHTTCCEEEEETTEEEEECGG-GS
T ss_pred CCCcHHHHHHHHHHHHHHhcCCcEEEEEEEecCccCCCCCCCCccceEEeccchhHHHhcCcceeeeCCeEEEECCH-Hh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999986 77
Q ss_pred cccccccccCCCceEEEeeCCCccchhhhcccccccccccccceeccCHHHHHHHHHHcCCCCCCccccCCCCCCccCHH
Q psy12817 770 MRTARPLDFLPGFSFEGFANRDSLRYAQLYNIAAEAHTVVRGTLRYRGFVDAMQAIQKLGLLDLKEHPALHPSGPEICWR 849 (1201)
Q Consensus 770 ~~~~~~idf~pg~~lE~ypNRDSl~Y~~~YgI~~~~~Tl~rgTLRy~Gf~e~~~~L~~LGLl~~ep~~~l~~~~~~it~r 849 (1201)
++..+++++++++.||+||||||++|.+.|+++ +|+||+||||||||||+.|+.|++|||+++++.+.+. ..+||+
T Consensus 80 ~~~~~~~~~~~~~~~E~~pnrdsl~y~~~y~~~-~i~t~~rgTLRy~G~~~~~~~l~~lGl~~~~~~~~l~---~~~t~~ 155 (267)
T d1e5qa2 80 MATAKPYFIYPGFAFVAYPNRDSTPYKERYQIP-EADNIVRGTLRYQGFPQFIKVLVDIGFLSDEEQPFLK---EAIPWK 155 (267)
T ss_dssp GGGCEECCSSTTBCEEEEECSBCTTHHHHTTCT-TCSEEEEEEEEETTHHHHHHHHHHTTTTCCCCCGGGG---SCCBHH
T ss_pred hhhceeeeccCCcceEEEecCCCcchhhhhcCc-chhhhhhhhhcccchHHHHHHHHHHHhccCCcccccc---CCCCHH
Confidence 888889998889999999999999999999998 9999999999999999999999999999999988653 578999
Q ss_pred HHHHHHcCCCCCchhHHHHHHHHHhhhcCcchhHHHhhccccchhhhcccCCCcchhhhHHHhhhhhhhhcccccccccC
Q psy12817 850 ELVCTLLGLSTSDIFYENLKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIRLVDYEKLVDDEG 929 (1201)
Q Consensus 850 ~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~~~ 929 (1201)
++++.+++.+..+ ++++...+.....
T Consensus 156 ~~~~~~l~~~~~~--~~~~~~~~~~~~~---------------------------------------------------- 181 (267)
T d1e5qa2 156 EATQKIVKASSAS--EQDIVSTIVSNAT---------------------------------------------------- 181 (267)
T ss_dssp HHHHHHHTCSSSS--HHHHHHHHHHHSC----------------------------------------------------
T ss_pred HHHHHHhCcCCcc--hhHHHHHHHhhcc----------------------------------------------------
Confidence 9999999974422 2222211111000
Q ss_pred cceeecccccccccchhhhccchhhhhhcCCCCCccccCCCcccchhhhHHHHhhhcccccccCCCCCCCCCceeeecCC
Q psy12817 930 NRVVAFGKYAGVAGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGS 1009 (1201)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1201)
.
T Consensus 182 -------------------------------~------------------------------------------------ 182 (267)
T d1e5qa2 182 -------------------------------F------------------------------------------------ 182 (267)
T ss_dssp -------------------------------C------------------------------------------------
T ss_pred -------------------------------c------------------------------------------------
Confidence 0
Q ss_pred CccccchhhhhhcCchhHHHHhhccCCCchhhhhhhhhhhcccchhhHHHHHHHhCCCCCccccCCCCCHHHHHHHHHHh
Q psy12817 1010 GNVSQGAQEIFQELPYEELVCTLLGLSTSDIFYENLKNIVADKVGNTGLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQ 1089 (1201)
Q Consensus 1010 g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~l~~ 1089 (1201)
.+....+.++++|+|||||+++ ++++++||+|+||++|++
T Consensus 183 ---------------------------------------~~~~~~~~i~~~L~wLGlf~~~-~v~~~~tp~d~L~~~Le~ 222 (267)
T d1e5qa2 183 ---------------------------------------ESTEEQKRIVAGLKWLGIFSDK-KITPRGNALDTLCATLEE 222 (267)
T ss_dssp ---------------------------------------SSHHHHHHHHHHHHHHTTTSSS-BCCCCSSHHHHHHHHHHH
T ss_pred ---------------------------------------cccchHHHHHHHHHHhcCCCCC-ccCCCCCHHHHHHHHHHH
Confidence 0001146789999999999988 567889999999999999
Q ss_pred hcCCCCCCccEEEEEeeEEEEeCCCceEEEEEeEEEEcCCCCc
Q psy12817 1090 KLVLDDGDRDVIVLRHDIDILWPNRSRERKSISLVVYGQPNGT 1132 (1201)
Q Consensus 1090 ~~~~~~~~~d~~~~~h~~~~~~~~~~~~~~~~~l~~~g~~~~~ 1132 (1201)
||+|+++|||||||||+|+|+|+||++|+++||||+||+|+|.
T Consensus 223 Kl~~~~~ErDMIvM~H~f~~~~~dG~~e~~tstlv~~G~p~G~ 265 (267)
T d1e5qa2 223 KMQFEEGERDLVMLQHKFEIENKDGSRETRTSSLCEYGAPIGS 265 (267)
T ss_dssp HSBCCTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEECCCTTS
T ss_pred HhCCCCCCceEEEEEEEEEEEcCCCCeEEEEEeEEEEcCCCCC
Confidence 9999999999999999999999999999999999999999984
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=100.00 E-value=4e-34 Score=291.56 Aligned_cols=167 Identities=25% Similarity=0.405 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHh
Q psy12817 136 AGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQ 215 (1201)
Q Consensus 136 AG~~avL~alg~rlL~~g~~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~ 215 (1201)
||+.+++. |+++|++.+ .|+++++||+|+ ++|++|+|+|+|+||++|+++|+
T Consensus 1 AG~~av~~--ga~~L~~~~-------------------------gG~G~Llgg~~g-v~pa~V~ViGaGvaG~~A~~~A~ 52 (168)
T d1pjca1 1 AGRLSVQF--GARFLERQQ-------------------------GGRGVLLGGVPG-VKPGKVVILGGGVVGTEAAKMAV 52 (168)
T ss_dssp HHHHHHHH--HHHHTSGGG-------------------------TSCCCCTTCBTT-BCCCEEEEECCSHHHHHHHHHHH
T ss_pred CcHHHHHH--HHHHhhhhc-------------------------CCcEEEecCCCC-CCCcEEEEECCChHHHHHHHHHh
Confidence 79999995 799888764 788999999998 99999999999999999999999
Q ss_pred hCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhhcCCcCcEEEEceecCC-C
Q psy12817 216 ELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASKIAPYASIIINGIYWAV-G 294 (1201)
Q Consensus 216 ~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~i~p~~DvlIn~~~w~~-~ 294 (1201)
+|| +.|++||.+..+.++++...++.... .+.+++ ..++.++.+|+||++++||+ +
T Consensus 53 ~lG----------------A~V~~~D~~~~~l~~l~~~~~~~~~~--~~~~~~-----~l~~~~~~aDivI~aalipG~~ 109 (168)
T d1pjca1 53 GLG----------------AQVQIFDINVERLSYLETLFGSRVEL--LYSNSA-----EIETAVAEADLLIGAVLVPGRR 109 (168)
T ss_dssp HTT----------------CEEEEEESCHHHHHHHHHHHGGGSEE--EECCHH-----HHHHHHHTCSEEEECCCCTTSS
T ss_pred hCC----------------CEEEEEeCcHHHHHHHHHhhccccee--ehhhhh-----hHHHhhccCcEEEEeeecCCcc
Confidence 999 77999999999999999865543222 111221 12456778999999999995 9
Q ss_pred CCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeeeccCCCCccccccccCC
Q psy12817 295 SPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCLYDADSNKDTKSFKGPG 374 (1201)
Q Consensus 295 ~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~yd~~~~~~~~~~~~~G 374 (1201)
+|+|||++|+++ |||| |||+|+|||+|||||+ +++||+++|+ |..+|
T Consensus 110 aP~lIt~~mv~~-Mk~G------------------SVIVDvaidqGG~~Et-s~ptt~~~p~-------------~~~~g 156 (168)
T d1pjca1 110 APILVPASLVEQ-MRTG------------------SVIVDVAVDQGGCVET-LHPTSHTQPT-------------YEVFG 156 (168)
T ss_dssp CCCCBCHHHHTT-SCTT------------------CEEEETTCTTCCSBTT-CCCCCSSSCE-------------EEETT
T ss_pred cCeeecHHHHhh-cCCC------------------cEEEEeecCCCCcccc-CCCCcccCCe-------------EEECC
Confidence 999999999999 9999 9999999999999999 6999999999 55689
Q ss_pred eEEEeeCCcCCC
Q psy12817 375 VLVCSIDNMPTQ 386 (1201)
Q Consensus 375 V~i~~VdNLPs~ 386 (1201)
|+|||++|||+.
T Consensus 157 V~~y~v~N~Pga 168 (168)
T d1pjca1 157 VVHYGVPNMPGA 168 (168)
T ss_dssp EEEECCSCGGGG
T ss_pred EEEEecCCCCCC
Confidence 999999999973
|
| >d1l7da2 c.23.12.2 (A:1-143,A:327-377) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: L-alanine dehydrogenase-like domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=99.97 E-value=1.8e-31 Score=279.15 Aligned_cols=175 Identities=19% Similarity=0.199 Sum_probs=152.3
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC----ccCCcEEEEecCCCc
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED----ISEASIIFGVKQVPV 76 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed----ls~adiIlgVKepp~ 76 (1201)
|.|||+||+ +++|+||+|||++|++|+++||+|+||+++| ++|+|++|+++||+|+++ ++++|+|++|++|..
T Consensus 1 M~Igv~kE~-~~~E~RValtP~~vkkl~~~G~~V~vE~gaG~~a~fsD~~Y~~aGA~i~~~~~~~~~~~diilkV~~P~~ 79 (194)
T d1l7da2 1 MKIAIPKER-RPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMT 79 (194)
T ss_dssp CEEEECCCC-STTCCCCSCCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEEECCCC
T ss_pred CEEEEeecC-CCCCcEeecCHHHHHHHHHCCCEEEEEcCcccccCCCHHHHHHhhhhcchhhhhhhhcccceeEecCCcc
Confidence 689999996 8999999999999999999999999999997 999999999999999865 347999999999853
Q ss_pred --------cCCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEecccccc-CCCceeeccchhhhHHHHHHHHHHHH
Q psy12817 77 --------DLLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDD-EGNRVVAFGKYAGVAGMVNILHGLGL 147 (1201)
Q Consensus 77 --------~~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~-~g~Rlvafg~~AgiAG~~avL~alg~ 147 (1201)
..+++++++++|.|+ ..|.++++.+.++++|+|+||+|||. +.+.|+++++||++|||.+++. ++
T Consensus 80 ~e~~~~ei~~lk~g~~li~~l~p----~~~~~~~~~l~~~~it~~a~e~ipRisraQ~md~Lssqa~iaG~~a~~~--~a 153 (194)
T d1l7da2 80 AEEGTDEVALIKEGAVLMCHLGA----LTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLVAADASPL--FA 153 (194)
T ss_dssp GGGSCCGGGGSCTTCEEEEECCG----GGCHHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHHHHHHHGHHHHHHH--HH
T ss_pred cccchhHhhhccCceEEEEeccc----ccchhHHHHHHhcCceEEeeecccccCCCCccCCcCcchhhhhHhHHHH--HH
Confidence 368999999999998 56899999999999999999999985 4567999999999999999995 56
Q ss_pred HHHhccCCCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHhhCCC
Q psy12817 148 RLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQELPY 219 (1201)
Q Consensus 148 rlL~~g~~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~ 219 (1201)
++|.+.. +||+. .+.+++++|.|+++.+|+.++++ |.
T Consensus 154 ~~l~~~~-~~~~~---------------------------------~~~~~lvig~~~~~l~~i~~~~~-G~ 190 (194)
T d1l7da2 154 KNLLNFL-TPHVD---------------------------------KDTKTLVMKLEDETVSGTCVTRD-GA 190 (194)
T ss_dssp HHHHHHH-GGGEE---------------------------------TTTTEECCCTTCHHHHHHEEEET-TE
T ss_pred HHHHhhh-hhccc---------------------------------cCCcEEEECchHHhhhhheeecC-Cc
Confidence 6665432 34431 13358999999999999999988 73
|
| >d1pjca2 c.23.12.2 (A:1-135,A:304-361) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: L-alanine dehydrogenase-like domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=99.96 E-value=2.9e-31 Score=277.28 Aligned_cols=136 Identities=18% Similarity=0.243 Sum_probs=126.3
Q ss_pred cEEEEEecCCCCCCceeecChHHHHHHHhCCCEEEEeCCCC--CCCCchHHhhcCcEEccC---ccCCcEEEEecCCCcc
Q psy12817 3 KVIAIRREDQSVWERRAALAPSNVKRLVRSGVKVIVQPSNR--RAYPVQAYANAGAIIQED---ISEASIIFGVKQVPVD 77 (1201)
Q Consensus 3 ~~IGI~rE~~~~~ErRvpLtP~~V~~L~~~G~~VlVE~sag--r~f~D~eY~~AGA~I~ed---ls~adiIlgVKepp~~ 77 (1201)
|.|||+||. ++.|+||+|||++|++|++.|++|+||+++| ++|+|++|+++||+|+++ +++||+|++||+|+++
T Consensus 1 M~IGvpkE~-~~~E~RValtP~~vkkl~~~G~~V~VE~gaG~~a~fsD~~Y~~aGa~i~~~~~~~~~~diilkv~~p~~~ 79 (193)
T d1pjca2 1 MEIGVPKEI-KNQEFRVGLSPSSVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAWSREMVVKVKEPLPA 79 (193)
T ss_dssp CEEEECCCC-STTCCCCSCCHHHHHHHHTTTCEEEEETTTTGGGTCCHHHHHHHTCEEESSHHHHHTSSEEECSSCCCGG
T ss_pred CEEEEecCC-CCCCcEeccCHHHHHHHHHCCCEEEEEcCcccccCCCHHHHHhhcceeeeccccccccceEEEeccCCHH
Confidence 789999996 8999999999999999999999999999997 999999999999999854 5679999999999984
Q ss_pred ---CCCCCcEEEEEcCccccccCCHHHHHHHHhcCCeEEEeccccccCCCceeeccchhhhHHHHHHHHH
Q psy12817 78 ---LLLPNKTYCMFSHTIKAQETNMPLLDAILQKNIRLVDYEKLVDDEGNRVVAFGKYAGVAGMVNILHG 144 (1201)
Q Consensus 78 ---~L~~~kt~i~FsHtiKaQ~~N~~lLd~ll~k~itlIdyE~i~d~~g~Rlvafg~~AgiAG~~avL~a 144 (1201)
.|++++++++|.|+ ..|++++++|.+++||+|+||.|||.++ .|+++++||++|||.+++.+
T Consensus 80 e~~~lk~~~~li~~l~p----~~~~ell~~l~~~~it~~s~E~ipr~sr-smd~Lss~a~iag~~a~~~a 144 (193)
T d1pjca2 80 EYDLMQKDQLLFTYLHL----AAARELTEQLMRVGLTAIAYETVELPNR-SLPLLTPMSIIVPWTATQAL 144 (193)
T ss_dssp GGGGCCTTCEEEECCCG----GGCHHHHHHHHHHTCEEEEGGGCCCTTS-CCTTTHHHHHHCHHHHHHHH
T ss_pred HHHhhhcCceEEEecCc----ccchHHHHHHHHcCCEEEEeeeccccCC-CCCccccccccCceeeHHHH
Confidence 58999999999999 4589999999999999999999999865 59999999999999999864
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=99.96 E-value=1e-29 Score=262.10 Aligned_cols=166 Identities=19% Similarity=0.243 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCccccCCCccccChHHHHHHHHhhhhhhhcCCCCCccCCeEEEEEcCcHHHHHHHHHHh
Q psy12817 136 AGMVNILHGLGLRLLALGHHTPFMHIGPAHNYRNSMMARQAIRDAGYEISLGNMPKSIGPLTIVFTGSGNVSQGAQEIFQ 215 (1201)
Q Consensus 136 AG~~avL~alg~rlL~~g~~tPfl~l~~~~~y~~~~~a~~av~~~G~~I~~gg~p~~i~P~~vvv~G~G~vg~GAi~~a~ 215 (1201)
|||++++. |+.+|.+.+ |+|.. +. +.++|++|+|+|+|+||++|+++|+
T Consensus 1 AGy~av~~--aa~~l~k~~--~~l~~--------------------------~~-g~V~pa~VvViGaGvaG~~Aa~~A~ 49 (183)
T d1l7da1 1 AGYRAVID--GAYEFARAF--PMMMT--------------------------AA-GTVPPARVLVFGVGVAGLQAIATAK 49 (183)
T ss_dssp HHHHHHHH--HHHHCSSCS--SCEEE--------------------------TT-EEECCCEEEEECCSHHHHHHHHHHH
T ss_pred CcHHHHHH--HHHHhhhhc--CCccc--------------------------cc-CCcCCcEEEEEcCcHHHHHHHHHHH
Confidence 89999995 788988874 65432 22 3488999999999999999999999
Q ss_pred hCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCccccccccc---------C----cccccchhh---hhcC
Q psy12817 216 ELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNE---------N----PSLYRSLFA---SKIA 279 (1201)
Q Consensus 216 ~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~---------~----pe~y~s~f~---~~i~ 279 (1201)
+|| +.|++||++..+.+++++ .++.|-..++.. + +++|...+. .+.+
T Consensus 50 ~lG----------------A~V~v~D~~~~~~~~l~~-l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~l~~~l 112 (183)
T d1l7da1 50 RLG----------------AVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKEL 112 (183)
T ss_dssp HTT----------------CEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHHHHHHHHH
T ss_pred HcC----------------CEEEEEeccHHHHHHHHH-hhcceEEEeccccccccccccchhhcCHHHHHHHHHHHHHHH
Confidence 999 789999999999999998 566665432210 1 122222222 4568
Q ss_pred CcCcEEEEceecCC-CCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeeccccCCCCCeee
Q psy12817 280 PYASIIINGIYWAV-GSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECTTIDTPFCL 358 (1201)
Q Consensus 280 p~~DvlIn~~~w~~-~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~TTid~P~~~ 358 (1201)
+.+|+||++++||+ ++|+|||++|+++ |||| |||+|+|+|+|||||+ |+.+|+
T Consensus 113 ~~aDlVI~talipG~~aP~lit~~mv~~-Mk~G------------------SVIVDvaidqGGn~Et-----s~~~~~-- 166 (183)
T d1l7da1 113 VKTDIAITTALIPGKPAPVLITEEMVTK-MKPG------------------SVIIDLAVEAGGNCPL-----SEPGKI-- 166 (183)
T ss_dssp TTCSEEEECCCCTTSCCCCCSCHHHHTT-SCTT------------------CEEEETTGGGTCSSTT-----CCTTCE--
T ss_pred HhhhhheeeeecCCcccceeehHHHHHh-cCCC------------------cEEEEEeecCCCcccc-----CcCCCE--
Confidence 89999999999995 9999999999999 9999 9999999999999995 566787
Q ss_pred ccCCCCccccccccCCeEEEeeCCcCCC
Q psy12817 359 YDADSNKDTKSFKGPGVLVCSIDNMPTQ 386 (1201)
Q Consensus 359 yd~~~~~~~~~~~~~GV~i~~VdNLPs~ 386 (1201)
|..+||+|||+.|||++
T Consensus 167 -----------~~~~gV~~~gv~NiPsr 183 (183)
T d1l7da1 167 -----------VVKHGVKIVGHTNVPSR 183 (183)
T ss_dssp -----------EEETTEEEECCSSGGGG
T ss_pred -----------EEECCEEEEeeCCCCCC
Confidence 66789999999999985
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.53 E-value=6e-14 Score=139.09 Aligned_cols=127 Identities=37% Similarity=0.623 Sum_probs=114.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
.|||+|||+|.||+.+|++|.+. +++|+|+||+.++++++++.++.......+..+ ...+.+.+...|++++++|+.
T Consensus 2 ~K~IliiGaG~~G~~~a~~L~~~-g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~i~~~~~~ 78 (182)
T d1e5qa1 2 TKSVLMLGSGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAGVQHSTPISLDVND--DAALDAEVAKHDLVISLIPYT 78 (182)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT-TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTC--HHHHHHHHTTSSEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECChHHHHHHHhcccccccccccccc--hhhhHhhhhccceeEeeccch
Confidence 58999999999999999999987 579999999999999999988765555555554 667888889999999999999
Q ss_pred ccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchh
Q psy12817 645 LHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGI 694 (1201)
Q Consensus 645 ~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGI 694 (1201)
.+..++..|++.++|++|.++..+.++++++.+++++..++.+++.++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 128 (182)
T d1e5qa1 79 FHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGYSAMA 128 (182)
T ss_dssp GHHHHHHHHHHHTCEEECSSCCCHHHHHTHHHHHHTTCEEECSCBCCHHH
T ss_pred hhhHHHHHHHhhccceeecccCcHHHHHHHHHhccccceeehhhhcchhh
Confidence 99999999999999999999999999999999999999999999999943
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=99.27 E-value=2.5e-12 Score=129.85 Aligned_cols=139 Identities=13% Similarity=0.135 Sum_probs=104.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.||+|+|+|.+|+.+++.|.+.++++ +.|++++.++.+. .... . ..++..+..+.|+|+.|+|.
T Consensus 3 kirvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~-------~~~~--~-----~~~~~~~~~~~D~Vvi~tp~ 68 (170)
T d1f06a1 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK-------TPVF--D-----VADVDKHADDVDVLFLCMGS 68 (170)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS-------SCEE--E-----GGGGGGTTTTCSEEEECSCT
T ss_pred cceEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccccc-------cccc--c-----chhhhhhccccceEEEeCCC
Confidence 468999999999999999999988898 5588888654321 1111 1 22445566789999999999
Q ss_pred cccHHHHHHHHHcCCeEEEcc----CChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHH---HHHHhhhcCCcEEEE
Q psy12817 644 NLHHHVAEFCIQHGKNLVTAS----YLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAME---CIDAAHLNGGKVESF 716 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~S----yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~---~idei~~~ggkV~sf 716 (1201)
..|.++++.|+++|+|+|+.. ...+..++|++.|++.|..++.+.|++||+.++.... .+.++.+. |++-.+
T Consensus 69 ~~h~~~a~~aL~aG~~vv~~~~~~~~~~~~~~~l~~~A~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~-G~ig~~ 147 (170)
T d1f06a1 69 ATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGRNPDFTASSQIAFGRAAHRMKQQ-GQSGAF 147 (170)
T ss_dssp TTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSCHHHHHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred cccHHHHHHHHHCCCcEEEecCccccCHHHHHHHHHHHHhcCceEEEeceeccchhHHHHHHHHHHHHHHHhc-CCCcce
Confidence 999999999999999998653 2344567899999999999999999999999876433 33444443 344444
Q ss_pred Ee
Q psy12817 717 VS 718 (1201)
Q Consensus 717 ~s 718 (1201)
.+
T Consensus 148 ~~ 149 (170)
T d1f06a1 148 TV 149 (170)
T ss_dssp CG
T ss_pred Ee
Confidence 43
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=99.05 E-value=3.1e-10 Score=113.01 Aligned_cols=119 Identities=17% Similarity=0.147 Sum_probs=97.0
Q ss_pred CCeEEEEcCchhHHH-HHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRP-LIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~-va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
++||+|||+|.+|+. ++..+...++++ +.|+|++.++++++++.+ ++. ..+ .+++++++.|+|+.|+|
T Consensus 1 Kiri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~-~~~-----~~~----~~~~l~~~~D~V~I~tp 70 (164)
T d1tlta1 1 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW-RIP-----YAD----SLSSLAASCDAVFVHSS 70 (164)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH-TCC-----BCS----SHHHHHTTCSEEEECSC
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcc-ccc-----ccc----cchhhhhhccccccccc
Confidence 469999999999975 678888777888 568999999999999887 443 233 35556679999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCch
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPG 693 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPG 693 (1201)
...|.+++..|+++|+|++++.. ...+.++|.+.|+++|+.++.+ ..+.|+
T Consensus 71 ~~~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~~~~ 126 (164)
T d1tlta1 71 TASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFFVG 126 (164)
T ss_dssp TTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGHHH
T ss_pred chhccccccccccccceeeccccccCCHHHHHHHHHHHHHcCCcEEEEeccccCHH
Confidence 99999999999999999999864 5578889999999999987653 234454
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.99 E-value=1.1e-09 Score=110.78 Aligned_cols=126 Identities=14% Similarity=0.189 Sum_probs=99.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc--cCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV--RSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI--~~~DVVIs~l 641 (1201)
+.||+|||+|.+|+.+++.+...++++|+ |+|+++++++.+++.+. .... ..+. +++++++ .+.|+|+.|+
T Consensus 1 kiki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~-~~~~-~~~~----~~~~~ll~~~~iD~v~I~t 74 (184)
T d1ydwa1 1 QIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANN-YPES-TKIH----GSYESLLEDPEIDALYVPL 74 (184)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTT-CCTT-CEEE----SSHHHHHHCTTCCEEEECC
T ss_pred CeEEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccc-cccc-eeec----CcHHHhhhccccceeeecc
Confidence 36999999999999999999888888855 78999999999988762 2100 0011 2355555 3689999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEecc--ccCchhHH
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNEV--GLDPGIDH 696 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e~--GlDPGIdh 696 (1201)
|...|.+++..|+++|+|++++.. ..++.++|.+.++++|+.++.+. .++|.+..
T Consensus 75 p~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~~~~v~~~~r~~~~~~~ 134 (184)
T d1ydwa1 75 PTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMWVHPQEACM 134 (184)
T ss_dssp CGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEECCCGGGCHHHHH
T ss_pred cchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCCEEEEEEeeecChHHHH
Confidence 999999999999999999999864 56678889999999999887553 46776543
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=98.96 E-value=1.2e-09 Score=108.96 Aligned_cols=113 Identities=16% Similarity=0.200 Sum_probs=92.2
Q ss_pred CeEEEEcCchhHHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLGAGYVSRP-LIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~-va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
+||+|||+|.+|+. ++..|.+.+++++.++|+++++++.+++.++ +.... .| .+++-+ .+.|+|+.|+|..
T Consensus 2 irvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~---~~--~~~ll~--~~iD~V~I~tp~~ 73 (167)
T d1xeaa1 2 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR-VSATC---TD--YRDVLQ--YGVDAVMIHAATD 73 (167)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT-CCCCC---SS--TTGGGG--GCCSEEEECSCGG
T ss_pred eEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcc-ccccc---cc--HHHhcc--cccceeccccccc
Confidence 69999999999975 6788888888898899999999999999884 32211 22 222222 3789999999999
Q ss_pred ccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 645 LHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
.|.+++..|+++|+|++++.. ..++.++|.+.+++.|+.++.
T Consensus 74 ~H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~v 118 (167)
T d1xeaa1 74 VHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYV 118 (167)
T ss_dssp GHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred ccccccccccccccccccCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 999999999999999999864 567888999999999998764
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=98.92 E-value=2.7e-09 Score=111.73 Aligned_cols=137 Identities=18% Similarity=0.183 Sum_probs=103.8
Q ss_pred cCCCeEEEEcCchhHH-HHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEE
Q psy12817 563 EESRNVLLLGAGYVSR-PLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~-~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVI 638 (1201)
.++.||+|||+|.+|+ .++..+...++++|+ |+|+++++++.+++.+ ++....+-.. .+++++++ +.|+|+
T Consensus 31 ~~~iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~-~i~~~~~~~~----~d~~ell~~~~iD~V~ 105 (221)
T d1h6da1 31 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEY-GVDPRKIYDY----SNFDKIAKDPKIDAVY 105 (221)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHT-TCCGGGEECS----SSGGGGGGCTTCCEEE
T ss_pred CCCEEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhh-cccccccccc----Cchhhhcccccceeee
Confidence 3567999999999997 466777777788854 8999999999999887 3321111111 23556665 589999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHHHHHHHHHHHh
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdhmlA~~~idei 706 (1201)
.|+|...|.+++..|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|....+ .+++++.
T Consensus 106 I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~--k~li~~~ 176 (221)
T d1h6da1 106 IILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYNQFSAQL--DHLAEAV 176 (221)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHH--HHHHHHH
T ss_pred eccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCCcEEEeeccccCHHHHHH--HHHHHhh
Confidence 999999999999999999999999964 5667889999999999987654 4577776554 3444444
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=98.90 E-value=5.4e-09 Score=105.70 Aligned_cols=113 Identities=17% Similarity=0.200 Sum_probs=90.9
Q ss_pred CCeEEEEcCchhHHH-HHHHHHhCCC-CeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRP-LIEYLHRDEN-IHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~-va~~La~~~~-~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs 639 (1201)
+.||+|||+|.+|+. ++..+.+.++ ++| .|+|++.++++.+++.++. ..+. . +++++++ +.|+|+.
T Consensus 3 kirigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~-~~~~---~-----~~~ell~~~~id~v~I 73 (181)
T d1zh8a1 3 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGN-PAVF---D-----SYEELLESGLVDAVDL 73 (181)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSS-CEEE---S-----CHHHHHHSSCCSEEEE
T ss_pred CcEEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccc-ccee---e-----eeeccccccccceeec
Confidence 358999999999986 6787876544 464 4899999999999988843 3222 1 3455554 5899999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
|+|...|.++++.|+++|+|++++.. ...+.++|.+.++++|+.+..
T Consensus 74 ~tp~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v 123 (181)
T d1zh8a1 74 TLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYI 123 (181)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEE
T ss_pred cccccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence 99999999999999999999999864 567888899999999988754
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=98.86 E-value=2.3e-09 Score=107.68 Aligned_cols=131 Identities=11% Similarity=0.212 Sum_probs=98.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
+.++|+|||+|.+|++++..|.+.+--+|+|++|+.++++.+++.++ ... ++..+ ..++|+||||+|-
T Consensus 16 ~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~-~~~--~~~~~---------~~~~DliINaTpi 83 (167)
T d1npya1 16 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG-YAY--INSLE---------NQQADILVNVTSI 83 (167)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT-CEE--ESCCT---------TCCCSEEEECSST
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh-hhh--hhccc---------ccchhhheecccc
Confidence 46899999999999999999998765579999999999999998874 222 22111 1478999999996
Q ss_pred cccH-------HHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCcEEEE
Q psy12817 644 NLHH-------HVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESF 716 (1201)
Q Consensus 644 ~~h~-------~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggkV~sf 716 (1201)
.+.+ ++-...+..+.-++|+.|.+.+.. |.+.|+++|..++++.+ |+..+.+.+ |
T Consensus 84 Gm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P~~T~-ll~~A~~~G~~~i~Gl~-------Mli~Qa~~~----------f 145 (167)
T d1npya1 84 GMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETP-FIRYAQARGKQTISGAA-------VIVLQAVEQ----------F 145 (167)
T ss_dssp TCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSCH-HHHHHHHTTCEEECHHH-------HHHHHHHHH----------H
T ss_pred CCccccccccccccHhhcCCcceEEEEeeccCCCH-HHHHHHHCCCeEEECHH-------HHHHHHHHH----------H
Confidence 5532 233566788889999999766544 45889999999988555 566665544 4
Q ss_pred EeecCCCC
Q psy12817 717 VSYCGGLP 724 (1201)
Q Consensus 717 ~s~cGGLP 724 (1201)
+.|.|-.|
T Consensus 146 ~lwtg~~~ 153 (167)
T d1npya1 146 ELYTHQRP 153 (167)
T ss_dssp HHHHSCCC
T ss_pred HHHhCCCC
Confidence 57887544
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.73 E-value=1e-08 Score=103.94 Aligned_cols=140 Identities=18% Similarity=0.202 Sum_probs=102.8
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHH---HHHHHcC---CeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDID---KVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe---~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.+.++|+|||+|.+|++++..|.+.+..++++++|+.++++ .+++++. .......++.+ .+.+.+.+.++|+
T Consensus 16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~di 93 (182)
T d1vi2a1 16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD--QQAFAEALASADI 93 (182)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHHHTCSE
T ss_pred cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc--ccchhhhhcccce
Confidence 45689999999999999999999987668999999866444 3333321 23445677777 7788888899999
Q ss_pred EEEcCCCcccHH------HHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcC
Q psy12817 637 VVSLLPYNLHHH------VAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNG 710 (1201)
Q Consensus 637 VIs~lP~~~h~~------VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~g 710 (1201)
||||+|..+... .-...++.+..++|+.|.+.+. .+.+.|++.|..++++.+ |+..+.+.+
T Consensus 94 iIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~T-~ll~~a~~~g~~~i~Gl~-------Mli~Qa~~~----- 160 (182)
T d1vi2a1 94 LTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMT-KLLQQAQQAGCKTIDGYG-------MLLWQGAEQ----- 160 (182)
T ss_dssp EEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSSC-HHHHHHHTTTCEEECHHH-------HHHHHHHHH-----
T ss_pred eccccCCccccccchhhhhHHHhhhcchhhHHhhcCcccc-HHHHHHHHCcCeEeccHH-------HHHHHHHHH-----
Confidence 999998654321 1134567788999999975554 445779999999998555 566665544
Q ss_pred CcEEEEEeecCC
Q psy12817 711 GKVESFVSYCGG 722 (1201)
Q Consensus 711 gkV~sf~s~cGG 722 (1201)
|..|+|-
T Consensus 161 -----f~iwtg~ 167 (182)
T d1vi2a1 161 -----FTLWTGK 167 (182)
T ss_dssp -----HHHHHSS
T ss_pred -----HHHHhCC
Confidence 4578874
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=98.73 E-value=1.2e-08 Score=103.03 Aligned_cols=137 Identities=18% Similarity=0.276 Sum_probs=96.1
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC-eeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR-VEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~-v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.++|+|+|+|.++++++..|.+. ..+|+|++|+.++++.+++.+.. ......+.. ...+.++|+||||+
T Consensus 16 ~~~k~vlIlGaGGaarai~~aL~~~-~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~-------~~~~~~~diiIN~t 87 (171)
T d1p77a1 16 RPNQHVLILGAGGATKGVLLPLLQA-QQNIVLANRTFSKTKELAERFQPYGNIQAVSMD-------SIPLQTYDLVINAT 87 (171)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG-------GCCCSCCSEEEECC
T ss_pred CCCCEEEEECCcHHHHHHHHHHccc-CceeeeccchHHHHHHHHHHHhhccccchhhhc-------cccccccceeeecc
Confidence 4578999999999999999999874 46899999999999999987732 122222111 11246899999999
Q ss_pred CCcccHHH---HHHHHHcCCeEEEccCChHHHHHHHHHHHHcCC-EEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEE
Q psy12817 642 PYNLHHHV---AEFCIQHGKNLVTASYLSPEMMALHERAASAGI-TVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFV 717 (1201)
Q Consensus 642 P~~~h~~V---akacIeaGkh~VD~Syvs~e~~eLde~AkeAGV-til~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~ 717 (1201)
|..+.... ...-++.+..++|..|..|....+.+.|+++|. +++++.+ |+..+.+.+ |.
T Consensus 88 p~g~~~~~~~~~~~~~~~~~~~~D~vy~~p~~T~~l~~A~~~g~~~v~~Gl~-------Ml~~Qa~~~----------f~ 150 (171)
T d1p77a1 88 SAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFG-------MLVAQAAHS----------FH 150 (171)
T ss_dssp CC-------CCCHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCEECSHH-------HHHHHHHHH----------HH
T ss_pred cccccccccchhhhhhcccceeeeeeccCcccHHHHHHHHHcCCCcccCcHH-------HHHHHHHHH----------HH
Confidence 97664332 233466788899999976654455688999998 5777665 566665544 45
Q ss_pred eecCCCC
Q psy12817 718 SYCGGLP 724 (1201)
Q Consensus 718 s~cGGLP 724 (1201)
.|+|-.|
T Consensus 151 iwtg~~~ 157 (171)
T d1p77a1 151 LWRGVMP 157 (171)
T ss_dssp HHHSCCC
T ss_pred HHHCCCC
Confidence 7888543
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=98.70 E-value=7.6e-09 Score=103.88 Aligned_cols=136 Identities=18% Similarity=0.241 Sum_probs=96.8
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCee-EEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVE-ATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~-~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.++|+|||+|.++++++..|.+.+ .+|+|++|+.++++++++.+.+.. ...++. +.. ...++|+||||+
T Consensus 16 ~~~k~vlIlGaGGaarai~~al~~~g-~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~-----~~~--~~~~~dliIN~T 87 (170)
T d1nyta1 16 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNRTVSRAEELAKLFAHTGSIQALSM-----DEL--EGHEFDLIINAT 87 (170)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSHHHHHHHHHHTGGGSSEEECCS-----GGG--TTCCCSEEEECC
T ss_pred CCCCEEEEECCcHHHHHHHHHhcccc-eEEEeccchHHHHHHHHHHHhhccccccccc-----ccc--cccccceeeccc
Confidence 35689999999999999999999875 589999999999999998774321 112222 111 235799999999
Q ss_pred CCcccHH---HHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCC-EEEeccccCchhHHHHHHHHHHHhhhcCCcEEEEE
Q psy12817 642 PYNLHHH---VAEFCIQHGKNLVTASYLSPEMMALHERAASAGI-TVLNEVGLDPGIDHLLAMECIDAAHLNGGKVESFV 717 (1201)
Q Consensus 642 P~~~h~~---VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGV-til~e~GlDPGIdhmlA~~~idei~~~ggkV~sf~ 717 (1201)
|..++.. .-...+..+.-++|+.|.+.++. +.+.|+++|. .++++.+ |+..+.+.+. .
T Consensus 88 p~G~~~~~~~~~~~~~~~~~~v~D~vY~P~~T~-ll~~A~~~G~~~~i~Gl~-------MLi~Qa~~~f----------~ 149 (170)
T d1nyta1 88 SSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTP-FLAWCEQRGSKRNADGLG-------MLVAQAAHAF----------L 149 (170)
T ss_dssp SCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCH-HHHHHHHTTCCEEECTHH-------HHHHHHHHHH----------H
T ss_pred ccCcccCCCCCcHHHhccCcEEEEeecCCCCCH-HHHHHHHcCCCcccCCHH-------HHHHHHHHHH----------H
Confidence 9766422 12234567778899999766554 4478999997 4677655 5666655444 5
Q ss_pred eecCCCC
Q psy12817 718 SYCGGLP 724 (1201)
Q Consensus 718 s~cGGLP 724 (1201)
.|+|--|
T Consensus 150 lwtG~~~ 156 (170)
T d1nyta1 150 LWHGVLP 156 (170)
T ss_dssp HHHSSCC
T ss_pred HHhCCCC
Confidence 7887544
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=98.69 E-value=5.4e-08 Score=102.45 Aligned_cols=148 Identities=13% Similarity=0.126 Sum_probs=98.8
Q ss_pred ccCCCeEEEEcCch----hHHHHHHHHHh-CCCCeEE-EEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhcc-
Q psy12817 562 TEESRNVLLLGAGY----VSRPLIEYLHR-DENIHIT-LGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVR- 632 (1201)
Q Consensus 562 ~~~mkKVLILGAG~----VG~~va~~La~-~~~~~Vt-VadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~- 632 (1201)
+.++.||+|||+|. +++.++..+.+ .++++|+ |+|++.++++++++.+. .... . ++++++++
T Consensus 13 ~~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~----~-----~~~~~l~~~ 83 (237)
T d2nvwa1 13 SSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATG----F-----DSLESFAQY 83 (237)
T ss_dssp GGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEE----E-----SCHHHHHHC
T ss_pred CCCCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhccccccee----e-----cchhhcccc
Confidence 35678999999875 56666767765 4678854 89999999999998872 2221 1 23455554
Q ss_pred -CCcEEEEcCCCcccHHHHHHHHHcC------CeEEEccC---ChHHHHHHHHHHHHc-CCEEEe--ccccCchhHHHHH
Q psy12817 633 -SADLVVSLLPYNLHHHVAEFCIQHG------KNLVTASY---LSPEMMALHERAASA-GITVLN--EVGLDPGIDHLLA 699 (1201)
Q Consensus 633 -~~DVVIs~lP~~~h~~VakacIeaG------kh~VD~Sy---vs~e~~eLde~AkeA-GVtil~--e~GlDPGIdhmlA 699 (1201)
+.|+|+.|+|...|.++++.|+++| +|++++.. ..++.+++.+.|+++ ++.++. ...++|++..+
T Consensus 84 ~~iD~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKPla~~~~e~~~l~~~a~~~~~~~~~v~~~~R~~p~~~~~-- 161 (237)
T d2nvwa1 84 KDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTIICLQGRYNSVVGNI-- 161 (237)
T ss_dssp TTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEEEECGGGCCHHHHHH--
T ss_pred cccceeeccCCCcchhhHHHHHHHhcccccCCceEEEeccccCCHHHHHHHHHHHhhcCCeeEEEEECCcCCHHHHHH--
Confidence 6899999999999999999999998 59999975 455778888888876 566543 46799987654
Q ss_pred HHHHHHhhh--cCCcEEEEEeec
Q psy12817 700 MECIDAAHL--NGGKVESFVSYC 720 (1201)
Q Consensus 700 ~~~idei~~--~ggkV~sf~s~c 720 (1201)
++.+.++.+ .-|++.++....
T Consensus 162 k~~i~~~~~~g~iG~v~~~~~~~ 184 (237)
T d2nvwa1 162 LRIYESIADYHFLGKPESKSSRG 184 (237)
T ss_dssp HHHHHHHHHHHHC----------
T ss_pred HHHHHhchhcCeecCEEEEEEEE
Confidence 333433211 236777765433
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.57 E-value=8.9e-08 Score=95.55 Aligned_cols=111 Identities=16% Similarity=0.224 Sum_probs=85.2
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
+.++++|+|||+|.+|+.++++|...+--+++|++|+.+++++++..++ ..+. + .+++.+.+.++|+||+|+
T Consensus 21 ~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~-~~~~-----~--~~~~~~~l~~~Divi~at 92 (159)
T d1gpja2 21 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-GEAV-----R--FDELVDHLARSDVVVSAT 92 (159)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-CEEC-----C--GGGHHHHHHTCSEEEECC
T ss_pred CcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh-cccc-----c--chhHHHHhccCCEEEEec
Confidence 4678999999999999999999998755579999999999999999984 4432 2 457888899999999999
Q ss_pred CC---cccHHHHHHHHHcC---C--eEEEccC---ChHHHHHHHHHHHHcCCEEEe
Q psy12817 642 PY---NLHHHVAEFCIQHG---K--NLVTASY---LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 642 P~---~~h~~VakacIeaG---k--h~VD~Sy---vs~e~~eLde~AkeAGVtil~ 686 (1201)
+. .++.+.++..++.. + -++|++. +.+.+.++ .|+.+++
T Consensus 93 ss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr~vd~~v~~~------~~v~l~~ 142 (159)
T d1gpja2 93 AAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDVEEGVENI------EDVEVRT 142 (159)
T ss_dssp SSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCSBCTTGGGS------TTEEEEE
T ss_pred CCCCccccHhhhHHHHHhcccCCCeEEEeecCCCCcChhhhcc------CCeEEEe
Confidence 64 36788888777643 2 4889874 33433333 4666665
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.49 E-value=2e-08 Score=101.34 Aligned_cols=137 Identities=17% Similarity=0.273 Sum_probs=93.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe---e-EEEeecCCCCchHHHhhccCCcEEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV---E-ATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v---~-~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.+.|+|+|||+|.++++++..|.+.+ +|+|++|+.++++++++.+... . ...++. +.+...+.++|+||
T Consensus 16 ~~~k~vlIlGaGG~arai~~aL~~~~--~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dliI 88 (177)
T d1nvta1 16 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF-----SGLDVDLDGVDIII 88 (177)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE-----ECTTCCCTTCCEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHcccc--ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhh-----hhhhhccchhhhhc
Confidence 46789999999999999999986543 8999999999999998765210 0 000111 22344556899999
Q ss_pred EcCCCcccHHH------HHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhhhcCCc
Q psy12817 639 SLLPYNLHHHV------AEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAHLNGGK 712 (1201)
Q Consensus 639 s~lP~~~h~~V------akacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~~~ggk 712 (1201)
||+|..+++.. -...+..+.-++|..|.+... .+.+.|+++|..++++. +|+..+.+.+
T Consensus 89 n~tp~g~~~~~~~~~~~~~~~~~~~~~v~D~~y~p~~T-~l~~~a~~~G~~~i~Gl-------~MLv~Qa~~q------- 153 (177)
T d1nvta1 89 NATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLET-VLLKEAKKVNAKTINGL-------GMLIYQGAVA------- 153 (177)
T ss_dssp ECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSC-HHHHHHHTTTCEEECTH-------HHHHHHHHHH-------
T ss_pred cCCcccccccccccchhhhhccCcccceeeecCCcHhH-HHHHHHHHCCCcccCCH-------HHHHHHHHHH-------
Confidence 99997653221 112234566688988865553 34477899999999855 3666665554
Q ss_pred EEEEEeecCCCC
Q psy12817 713 VESFVSYCGGLP 724 (1201)
Q Consensus 713 V~sf~s~cGGLP 724 (1201)
|+.|+|-.|
T Consensus 154 ---f~lwtg~~~ 162 (177)
T d1nvta1 154 ---FKIWTGVEP 162 (177)
T ss_dssp ---HHHHHSSCC
T ss_pred ---HHHHHCCCC
Confidence 457888644
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.46 E-value=5e-08 Score=97.55 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=86.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVV 638 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVI 638 (1201)
+..+.||+|||+|.+|+..++.|.+.++.. +.+++....+ +.. ....... . ++++++. +.|+|+
T Consensus 4 ~~~k~kv~iIG~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-----~-----~~~e~l~~~~iD~V~ 70 (172)
T d1lc0a1 4 NSGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR--ELG-SLDEVRQ-----I-----SLEDALRSQEIDVAY 70 (172)
T ss_dssp CCCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSS--CCC-EETTEEB-----C-----CHHHHHHCSSEEEEE
T ss_pred CCCCcEEEEEcCCHHHHHHHHHHHhCCCCcEEEEEeccchH--HHH-HhhccCc-----C-----CHHHHHhCCCcchhh
Confidence 355789999999999999999887643322 4444432211 111 1112211 1 2444443 689999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEec--cccCchhHH
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNE--VGLDPGIDH 696 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e--~GlDPGIdh 696 (1201)
.|+|...|.++++.|+++|+|++++.. ..++.++|.+.|+++|+.++.+ ..++|.+-.
T Consensus 71 I~tp~~~H~~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~ 133 (172)
T d1lc0a1 71 ICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEHVELLKNIFLK 133 (172)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGGTTHHHH
T ss_pred hcccccccccccccccccchhhhcCCCccccHHHHHHHHHHHHHcCCeEEEecHHHhhHHHHH
Confidence 999999999999999999999999864 5678888999999999987643 468887544
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.44 E-value=6e-07 Score=88.96 Aligned_cols=116 Identities=20% Similarity=0.341 Sum_probs=88.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|+||++||.|.||.++++.|.+. +++|++.||+.++.+.+.... ... .....+.++.+|+|+.|+|..
T Consensus 1 M~kIg~IGlG~MG~~iA~~L~~~-g~~v~~~d~~~~~~~~~~~~~--~~~---------~~~~~e~~~~~diii~~v~~~ 68 (162)
T d3cuma2 1 MKQIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQSAVDGLVAAG--ASA---------ARSARDAVQGADVVISMLPAS 68 (162)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHTT--CEE---------CSSHHHHHTSCSEEEECCSCH
T ss_pred CCEEEEEEEHHHHHHHHHHHHHC-CCeEEEEECchhhhhhhhhhh--ccc---------cchhhhhccccCeeeecccch
Confidence 78999999999999999999986 689999999999988876542 221 234677888999999999865
Q ss_pred ccH-HHH------HHHHHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEeccccCch
Q psy12817 645 LHH-HVA------EFCIQHGKNLVTASYLS-PEMMALHERAASAGITVLNEVGLDPG 693 (1201)
Q Consensus 645 ~h~-~Va------kacIeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~e~GlDPG 693 (1201)
... .+. ...+..|+-++|.+-++ +..+++.+.+++.|+.++. +++.-|
T Consensus 69 ~~~~~v~~~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~d-apv~Gg 124 (162)
T d3cuma2 69 QHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD-APVSGG 124 (162)
T ss_dssp HHHHHHHHSTTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEESC
T ss_pred hhHHHHHhccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCCcEEe-cccccC
Confidence 432 232 23355678899998654 4568899999999999884 554434
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=98.42 E-value=5.5e-07 Score=89.05 Aligned_cols=109 Identities=19% Similarity=0.356 Sum_probs=84.2
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
|||.|||+|.||+++++.|++. +++|++.||++++++++.+.. ... .+...++++++|+||.|+|..-
T Consensus 1 MkIgiIGlG~MG~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~--~~~---------~~~~~e~~~~~d~ii~~v~~~~ 68 (161)
T d1vpda2 1 MKVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRNPEAIADVIAAG--AET---------ASTAKAIAEQCDVIITMLPNSP 68 (161)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTT--CEE---------CSSHHHHHHHCSEEEECCSSHH
T ss_pred CEEEEEehhHHHHHHHHHHHHC-CCeEEEEeCCcchhHHHHHhh--hhh---------cccHHHHHhCCCeEEEEcCCHH
Confidence 6899999999999999999986 689999999999999988643 321 1246677789999999998643
Q ss_pred c-HHHH------HHHHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEe
Q psy12817 646 H-HHVA------EFCIQHGKNLVTASYLSP-EMMALHERAASAGITVLN 686 (1201)
Q Consensus 646 h-~~Va------kacIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~ 686 (1201)
. ..+. ...++.|+-++|.+..++ ..+++.+.+++.|+.++.
T Consensus 69 ~v~~v~~~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vd 117 (161)
T d1vpda2 69 HVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLD 117 (161)
T ss_dssp HHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHhCCcchhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCceec
Confidence 3 2222 222356788999987554 567888899999998875
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.36 E-value=3.3e-06 Score=80.52 Aligned_cols=110 Identities=15% Similarity=0.133 Sum_probs=81.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~~ 644 (1201)
|||+|+|+|.+|+.+++.|.+. +++|++.|.++++++++.+.+ +...+..|.+| .+.++++ ++++|+++.+++..
T Consensus 1 M~IvI~G~G~~G~~la~~L~~~-g~~v~vid~d~~~~~~~~~~~-~~~vi~Gd~~~--~~~l~~~~i~~a~~vv~~t~~d 76 (132)
T d1lssa_ 1 MYIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEI-DALVINGDCTK--IKTLEDAGIEDADMYIAVTGKE 76 (132)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC-SSEEEESCTTS--HHHHHHTTTTTCSEEEECCSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCCcceecCChhhhhhhhhhh-hhhhccCcccc--hhhhhhcChhhhhhhcccCCcH
Confidence 7999999999999999999876 589999999999999988876 67888999998 8888876 78999999998764
Q ss_pred c-cHHHHHHHHHcCCe-EEEccCChHHHHHHHHHHHHcCCE
Q psy12817 645 L-HHHVAEFCIQHGKN-LVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 645 ~-h~~VakacIeaGkh-~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
- +..++..+-+.+.. .+......... +..++.|+.
T Consensus 77 ~~N~~~~~~~k~~~~~~iI~~~~~~~~~----~~l~~~G~d 113 (132)
T d1lssa_ 77 EVNLMSSLLAKSYGINKTIARISEIEYK----DVFERLGVD 113 (132)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECSSTTHH----HHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCceEEEEecCHHHH----HHHHHCCCC
Confidence 2 22233344455554 44332222222 335677884
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.25 E-value=7.1e-07 Score=90.71 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=65.2
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.||||+|+| +|++|+.+++.|+++ +++|++.+|++++++.... ++++.+..|+.| .+++.++++++|+||+|++
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~-g~~V~~~~R~~~~~~~~~~--~~~~~~~gD~~d--~~~l~~al~~~d~vi~~~g 76 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEGP--RPAHVVVGDVLQ--AADVDKTVAGQDAVIVLLG 76 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSSC--CCSEEEESCTTS--HHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEEcChhhcccccc--cccccccccccc--hhhHHHHhcCCCEEEEEec
Confidence 489999999 699999999999987 5899999999988654322 468999999998 8999999999999999986
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 77 ~ 77 (205)
T d1hdoa_ 77 T 77 (205)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=98.21 E-value=3.6e-06 Score=84.17 Aligned_cols=118 Identities=9% Similarity=0.152 Sum_probs=88.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
+.+|.|||.|.||.++++.|.+. +++|++.||++++++++.+........ ..+.. .+.+.+.+..+|+++.++|..
T Consensus 2 ~~nIg~IGlG~MG~~mA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~~~~-~~a~~--~~~~~~~~~~~~~ii~~~~~~ 77 (176)
T d2pgda2 2 QADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTVSKVDDFLANEAKGTKV-LGAHS--LEEMVSKLKKPRRIILLVKAG 77 (176)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSTHHHHHHHHTTTTTSSC-EECSS--HHHHHHHBCSSCEEEECSCTT
T ss_pred CCcEEEEeEhHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHhccccccc-cchhh--hhhhhhhhcccceEEEecCch
Confidence 47899999999999999999986 689999999999999987653111100 11233 567888889999999999865
Q ss_pred cc-HHHHHHH---HHcCCeEEEccC-ChHHHHHHHHHHHHcCCEEEe
Q psy12817 645 LH-HHVAEFC---IQHGKNLVTASY-LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 645 ~h-~~Vakac---IeaGkh~VD~Sy-vs~e~~eLde~AkeAGVtil~ 686 (1201)
-. ..+.... ++.|+-++|.+- ..+..+++.+.+++.|+.++.
T Consensus 78 ~~v~~v~~~l~~~~~~g~iiid~sT~~~~~~~~~~~~~~~~g~~~ld 124 (176)
T d2pgda2 78 QAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVG 124 (176)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhccccCcEEEecCcchhHHHHHHHHHHHhcCCceec
Confidence 32 2333333 356788999976 455668899999999999884
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=98.06 E-value=3.3e-06 Score=82.47 Aligned_cols=103 Identities=16% Similarity=0.102 Sum_probs=75.7
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVT-NEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La-~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||.|||+|.||+++++.|.+. +++|++.+++.++..++. ... ++. +...++++++|+||.|+|..
T Consensus 1 MkIgiIG~G~mG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~-~~~-----------~~~~e~~~~~diIi~~v~~~ 67 (152)
T d1i36a2 1 LRVGFIGFGEVAQTLASRLRSR-GVEVVTSLEGRSPSTIERARTV-GVT-----------ETSEEDVYSCPVVISAVTPG 67 (152)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEECCTTCCHHHHHHHHHH-TCE-----------ECCHHHHHTSSEEEECSCGG
T ss_pred CEEEEEcHHHHHHHHHHHHHHC-CCeEEEEcCchhHHHHHhhhcc-ccc-----------ccHHHHHhhcCeEEEEecCc
Confidence 6899999999999999999986 578999988776554443 332 221 12345678999999999987
Q ss_pred ccHHHHHHHHH-cCCeEEEccCChH-HHHHHHHHHHHcC
Q psy12817 645 LHHHVAEFCIQ-HGKNLVTASYLSP-EMMALHERAASAG 681 (1201)
Q Consensus 645 ~h~~VakacIe-aGkh~VD~Syvs~-e~~eLde~AkeAG 681 (1201)
...+++..+.. .+..++|.+-+++ ..+++.+.+++.|
T Consensus 68 ~~~~~~~~~~~~~~~~~id~st~~p~~~~~l~~~~~~~~ 106 (152)
T d1i36a2 68 VALGAARRAGRHVRGIYVDINNISPETVRMASSLIEKGG 106 (152)
T ss_dssp GHHHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHCSSSE
T ss_pred hHHHHHHhhcccCCceeeccCcCCHHHHHHHHHHHhccC
Confidence 77777665543 5667899887655 4677877776665
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=98.04 E-value=1.5e-05 Score=78.46 Aligned_cols=86 Identities=16% Similarity=0.194 Sum_probs=64.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.|||.|||+|.+|..++..|++. +++|++.+|++++++.+.+.- +........... ..++.+.++++|+||
T Consensus 1 sk~iaIiGaG~~G~~~A~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~e~~~~aD~ii 77 (184)
T d1bg6a2 1 SKTYAVLGLGNGGHAFAAYLALK-GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLL--TSDIGLAVKDADVIL 77 (184)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEE--ESCHHHHHTTCSEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhh--hhhhHhHhcCCCEEE
Confidence 37999999999999999999997 589999999999998877542 111111111110 234778889999999
Q ss_pred EcCCCcccHHHHHHH
Q psy12817 639 SLLPYNLHHHVAEFC 653 (1201)
Q Consensus 639 s~lP~~~h~~Vakac 653 (1201)
.|+|...+..+++..
T Consensus 78 i~v~~~~~~~~~~~i 92 (184)
T d1bg6a2 78 IVVPAIHHASIAANI 92 (184)
T ss_dssp ECSCGGGHHHHHHHH
T ss_pred EEEchhHHHHHHHHh
Confidence 999988777666554
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=97.99 E-value=6.1e-06 Score=81.98 Aligned_cols=96 Identities=16% Similarity=0.203 Sum_probs=66.9
Q ss_pred CCCeEEEEcCchhHHH-HHHHHHhCCCCeE-EEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhh--ccCCcEEE
Q psy12817 564 ESRNVLLLGAGYVSRP-LIEYLHRDENIHI-TLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGL--VRSADLVV 638 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~-va~~La~~~~~~V-tVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~el--I~~~DVVI 638 (1201)
++.||+|||+|.+|+. +.+.|.+.+..++ .|+||+.+ +..+.++++ +++... .+ .+.+.+. ..+.|+|+
T Consensus 3 kkirvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~-~i~~~~---~~--~d~l~~~~~~~~iDiVf 76 (157)
T d1nvmb1 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM-GVTTTY---AG--VEGLIKLPEFADIDFVF 76 (157)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT-TCCEES---SH--HHHHHHSGGGGGEEEEE
T ss_pred CCcEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhc-CCcccc---cc--eeeeeecccccccCEEE
Confidence 4579999999999985 5677666777774 57898875 444566665 444321 11 2334332 24689999
Q ss_pred EcCCCcccHHHH--HHHHHcCCeEEEccC
Q psy12817 639 SLLPYNLHHHVA--EFCIQHGKNLVTASY 665 (1201)
Q Consensus 639 s~lP~~~h~~Va--kacIeaGkh~VD~Sy 665 (1201)
.|+|...|.... ..+.++|++++|.|.
T Consensus 77 ~ATpag~h~~~~~~~~aa~~G~~VID~s~ 105 (157)
T d1nvmb1 77 DATSASAHVQNEALLRQAKPGIRLIDLTP 105 (157)
T ss_dssp ECSCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred EcCCchhHHHhHHHHHHHHcCCEEEEccc
Confidence 999998886644 455799999999973
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.97 E-value=1.4e-05 Score=78.45 Aligned_cols=77 Identities=17% Similarity=0.159 Sum_probs=56.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
|||+|||+|.||..+++.|.+. +++|++.||+.+.+++..+.. .+... .+ ..+.++++|+||.|+|...
T Consensus 1 MkI~iIG~G~mG~~lA~~l~~~-g~~V~~~d~~~~~~~~a~~~~-~~~~~----~~-----~~~~~~~~DiIilavp~~~ 69 (165)
T d2f1ka2 1 MKIGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQSTCEKAVERQ-LVDEA----GQ-----DLSLLQTAKIIFLCTPIQL 69 (165)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTT-SCSEE----ES-----CGGGGTTCSEEEECSCHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHhh-cccee----ee-----ecccccccccccccCcHhh
Confidence 6899999999999999999876 689999999999888755432 12111 11 1246789999999999655
Q ss_pred cHHHHHHH
Q psy12817 646 HHHVAEFC 653 (1201)
Q Consensus 646 h~~Vakac 653 (1201)
...+.+..
T Consensus 70 ~~~vl~~l 77 (165)
T d2f1ka2 70 ILPTLEKL 77 (165)
T ss_dssp HHHHHHHH
T ss_pred hhhhhhhh
Confidence 44454443
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.96 E-value=5.5e-06 Score=81.29 Aligned_cols=86 Identities=13% Similarity=0.235 Sum_probs=66.2
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
|||++||+|.||+++++.|.+. +.++++.+|+.++++++++++ ++.+ . .+.+++++++|+|+-|+++..
T Consensus 1 MkIg~IG~G~mG~al~~~l~~~-~~~i~v~~r~~~~~~~l~~~~-g~~~-----~----~~~~~~~~~~dvIilavkp~~ 69 (152)
T d2ahra2 1 MKIGIIGVGKMASAIIKGLKQT-PHELIISGSSLERSKEIAEQL-ALPY-----A----MSHQDLIDQVDLVILGIKPQL 69 (152)
T ss_dssp CEEEEECCSHHHHHHHHHHTTS-SCEEEEECSSHHHHHHHHHHH-TCCB-----C----SSHHHHHHTCSEEEECSCGGG
T ss_pred CEEEEEeccHHHHHHHHHHHhC-CCeEEEEcChHHhHHhhcccc-ceee-----e----chhhhhhhccceeeeecchHh
Confidence 6899999999999999999876 578999999999999998877 3332 1 235667789999999997554
Q ss_pred cHHHHHHHHHcCCeEEEc
Q psy12817 646 HHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 646 h~~VakacIeaGkh~VD~ 663 (1201)
...+.+ .++.++.+++.
T Consensus 70 ~~~vl~-~l~~~~~iis~ 86 (152)
T d2ahra2 70 FETVLK-PLHFKQPIISM 86 (152)
T ss_dssp HHHHHT-TSCCCSCEEEC
T ss_pred HHHHhh-hcccceeEecc
Confidence 444433 35566667765
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=97.93 E-value=1.1e-05 Score=81.63 Aligned_cols=79 Identities=13% Similarity=0.169 Sum_probs=68.5
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
+.+.|+|+|.| +|.+|+.+++.|++.+ .+|++++|+.++++++++.+ .++....+|+.| .+.+++++++.|+|
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~iDil 96 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEG-AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD--DASRAEAVKGAHFV 96 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS--HHHHHHHTTTCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhc-cchhhcccchHHHHHHHHHHHhccchhhhhhhccc--HHHHHHHhcCcCee
Confidence 46779999999 7999999999999974 79999999999998887655 246677899998 88999999999999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
||+.+.
T Consensus 97 in~Ag~ 102 (191)
T d1luaa1 97 FTAGAI 102 (191)
T ss_dssp EECCCT
T ss_pred eecCcc
Confidence 999864
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.92 E-value=1.2e-05 Score=76.22 Aligned_cols=110 Identities=13% Similarity=0.200 Sum_probs=78.6
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~~ 644 (1201)
|+++|+|+|.+|+.+++.|.+. +.+|+++|.++++++++... +..++..|.++ ++.+.++ +.++|+||.++|..
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~-g~~vvvid~d~~~~~~~~~~--~~~~~~gd~~~--~~~l~~a~i~~a~~vi~~~~~~ 75 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRM-GHEVLAVDINEEKVNAYASY--ATHAVIANATE--ENELLSLGIRNFEYVIVAIGAN 75 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCCEEEESCHHHHHHTTTT--CSEEEECCTTC--TTHHHHHTGGGCSEEEECCCSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEecCcHHHHHHHHHh--CCcceeeeccc--chhhhccCCccccEEEEEcCch
Confidence 6899999999999999999986 57899999999999998764 45678899998 7788776 88999999999865
Q ss_pred ccHHH-HH-HHHHcCC-eEEEccCChHHHHHHHHHHHHcCCEE
Q psy12817 645 LHHHV-AE-FCIQHGK-NLVTASYLSPEMMALHERAASAGITV 684 (1201)
Q Consensus 645 ~h~~V-ak-acIeaGk-h~VD~Syvs~e~~eLde~AkeAGVti 684 (1201)
....+ +. .+-..+. +.+.........+. .++.|+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~iiar~~~~~~~~~----l~~~Gad~ 114 (134)
T d2hmva1 76 IQASTLTTLLLKELDIPNIWVKAQNYYHHKV----LEKIGADR 114 (134)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCSHHHHHH----HHHHTCSE
T ss_pred HHhHHHHHHHHHHcCCCcEEeecccHhHHHH----HHHCCCCE
Confidence 43222 22 2223343 34433333333333 45677743
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.82 E-value=5.2e-05 Score=75.32 Aligned_cols=117 Identities=9% Similarity=0.114 Sum_probs=84.8
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCe---eEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRV---EATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v---~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
|||.|||.|.||.++++.|.+. +++|.+.||++++++++.+..... ..... ..+ .+.+...+...+.++.+++
T Consensus 2 MkIGvIGlG~MG~~ma~~L~~~-G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~ 77 (178)
T d1pgja2 2 MDVGVVGLGVMGANLALNIAEK-GFKVAVFNRTYSKSEEFMKANASAPFAGNLKA-FET--MEAFAASLKKPRKALILVQ 77 (178)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE-CSC--HHHHHHHBCSSCEEEECCC
T ss_pred CEEEEEeehHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHcCCccccccchhh-hhh--hhHHHHhcccceEEEEeec
Confidence 6899999999999999999986 689999999999999998765321 11111 222 4566667778888888886
Q ss_pred Cccc-HH---HHHHHHHcCCeEEEccCCh-HHHHHHHHHHHHcCCEEEe
Q psy12817 643 YNLH-HH---VAEFCIQHGKNLVTASYLS-PEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~~h-~~---VakacIeaGkh~VD~Syvs-~e~~eLde~AkeAGVtil~ 686 (1201)
.... .. -....+..|.-++|.+-.. +..+++.+..++.|+.++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~iii~~st~~~~~~~~~~~~l~~~~~~~ld 126 (178)
T d1pgja2 78 AGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLG 126 (178)
T ss_dssp CSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CcchhhhhhhhhhhhccccceecccCccchhHHHHHHHHHhhcceeEec
Confidence 5322 22 2344566777889987644 4567788888899988764
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=97.75 E-value=9e-06 Score=79.36 Aligned_cols=67 Identities=19% Similarity=0.276 Sum_probs=54.8
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|||++||+|.||.++++.|.+.+..+|.+.+|++++++++++++ ++.+. .+ .+ .++++|+|+-|+++
T Consensus 1 MkI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~-~~~~~----~~--~~----~v~~~Div~lavkP 67 (152)
T d1yqga2 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL-GVETS----AT--LP----ELHSDDVLILAVKP 67 (152)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT-CCEEE----SS--CC----CCCTTSEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc-ccccc----cc--cc----cccccceEEEecCH
Confidence 68999999999999999998877789999999999999999887 44432 12 12 25679999999974
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.72 E-value=3.2e-05 Score=78.64 Aligned_cols=84 Identities=13% Similarity=0.219 Sum_probs=62.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeE-EEeecCCCCchHHHhhccCCc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEA-TLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~-v~lDV~D~~~e~L~elI~~~D 635 (1201)
..|+||+|||+|.+|.+++..|++. +.+|++.+|+.+.++.+.... |++.. -.+.++ .+++++++++|
T Consensus 5 ~~m~KI~ViGaG~wGtAlA~~La~~-g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t----~~l~~a~~~ad 79 (189)
T d1n1ea2 5 LYLNKAVVFGSGAFGTALAMVLSKK-CREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFT----SDVEKAYNGAE 79 (189)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHTT-EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEE----SCHHHHHTTCS
T ss_pred ceeceEEEECCCHHHHHHHHHHHHc-CCeEEEEEecHHHHHHHhhcccccccccccccccccccc----hhhhhccCCCC
Confidence 3578999999999999999999886 468999999999999887543 22221 001122 35888899999
Q ss_pred EEEEcCCCcccHHHHH
Q psy12817 636 LVVSLLPYNLHHHVAE 651 (1201)
Q Consensus 636 VVIs~lP~~~h~~Vak 651 (1201)
+||.++|......+++
T Consensus 80 ~iiiavPs~~~~~~~~ 95 (189)
T d1n1ea2 80 IILFVIPTQFLRGFFE 95 (189)
T ss_dssp CEEECSCHHHHHHHHH
T ss_pred EEEEcCcHHHHHHHHH
Confidence 9999999765544443
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.64 E-value=4.8e-05 Score=75.67 Aligned_cols=75 Identities=16% Similarity=0.219 Sum_probs=62.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.|++|+|.| +|++|+.+++.|++++ .+.|+...|++++.+.+. .+++.+..|+.+ .+.+.++++++|+||++.
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~---~~~~~~~~d~~~--~~~~~~~~~~~d~vi~~a 76 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG---GEADVFIGDITD--ADSINPAFQGIDALVILT 76 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT---CCTTEEECCTTS--HHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc---CCcEEEEeeecc--ccccccccccceeeEEEE
Confidence 589999999 7999999999999874 345666789988766543 367888999998 889999999999999997
Q ss_pred CC
Q psy12817 642 PY 643 (1201)
Q Consensus 642 P~ 643 (1201)
..
T Consensus 77 ~~ 78 (252)
T d2q46a1 77 SA 78 (252)
T ss_dssp CC
T ss_pred ee
Confidence 43
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.63 E-value=4.2e-05 Score=77.36 Aligned_cols=99 Identities=12% Similarity=0.233 Sum_probs=66.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEe-ec----CC-C--CchHHHhhccCCc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLI-DV----NN-G--GSDNLSGLVRSAD 635 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~l-DV----~D-~--~~e~L~elI~~~D 635 (1201)
|.||+|.|+|+||+.+++.+.++++++|+ |.|+.+.........+ ....... |- .+ + ....+..+..++|
T Consensus 1 MIKVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD 79 (178)
T d1b7go1 1 MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRR-GIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD 79 (178)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHT-TCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhccc-CcceeccCccceeccccceecCCchhhhhhcCC
Confidence 78999999999999999999999999954 5566544333222222 1111100 00 00 0 0113455556899
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 636 LVVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 636 VVIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+||.|+|.+.+.+-++..+++|+.+|-.+
T Consensus 80 iViecTG~f~~~e~a~~hl~~G~KvIi~~ 108 (178)
T d1b7go1 80 IVVDTTPNGVGAQYKPIYLQLQRNAIFQG 108 (178)
T ss_dssp EEEECCSTTHHHHHHHHHHHTTCEEEECT
T ss_pred EEEECCCCcCCHHHHHHHHHcCCEEEEEC
Confidence 99999998888889999999998877643
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=97.61 E-value=5.6e-05 Score=81.33 Aligned_cols=77 Identities=22% Similarity=0.313 Sum_probs=60.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||+|.| +|++|+.++++|++++..+|++.|+.......+.. .++++.+..|+++ ..+.++.+++++|+||.|+-..
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~-~~~~~~i~~Di~~-~~~~~~~~~~~~d~Vih~a~~~ 78 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN-HPHFHFVEGDISI-HSEWIEYHVKKCDVVLPLVAIA 78 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT-CTTEEEEECCTTT-CSHHHHHHHHHCSEEEECBCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc-CCCeEEEECccCC-hHHHHHHHHhCCCccccccccc
Confidence 5899999 79999999999998877789988887655444433 3679999999987 2333444777899999998543
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.60 E-value=0.0001 Score=77.28 Aligned_cols=78 Identities=21% Similarity=0.292 Sum_probs=68.9
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---CCcEEE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---SADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---~~DVVI 638 (1201)
.+.|+++|.| ++.+|+.+++.|++. +.+|.+++|+.+++++++++.+++.++.+|++| .+.++++++ ..|++|
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~g~iDilV 81 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPVCVDLGD--WEATERALGSVGPVDLLV 81 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHTTCCCCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCC--HHHHHHHHHHhCCceEEE
Confidence 4568999999 789999999999987 579999999999999999999889999999998 888887775 479999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
|+...
T Consensus 82 nnAg~ 86 (244)
T d1pr9a_ 82 NNAAV 86 (244)
T ss_dssp ECCCC
T ss_pred ecccc
Confidence 99753
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.60 E-value=9.1e-05 Score=72.32 Aligned_cols=109 Identities=27% Similarity=0.294 Sum_probs=78.2
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCccc
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNLH 646 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~h 646 (1201)
||.+||.|.||.++++.|.+.+ .+++.+|+.++++++.+... ... . ..+.+.++|++|.++|....
T Consensus 2 kIg~IGlG~MG~~ma~~L~~~g--~~~~~~~~~~~~~~~~~~~~-~~~-----~------~~~~~~~~~~~i~~~~~~~~ 67 (156)
T d2cvza2 2 KVAFIGLGAMGYPMAGHLARRF--PTLVWNRTFEKALRHQEEFG-SEA-----V------PLERVAEARVIFTCLPTTRE 67 (156)
T ss_dssp CEEEECCSTTHHHHHHHHHTTS--CEEEECSSTHHHHHHHHHHC-CEE-----C------CGGGGGGCSEEEECCSSHHH
T ss_pred eEEEEeHHHHHHHHHHHHHhCC--CEEEEeCCHHHHHHHHHHcC-Ccc-----c------ccccccceeEEEecccchhh
Confidence 7999999999999999998753 35678999999988887652 211 1 12344578999999986533
Q ss_pred H-HHHHH---HHHcCCeEEEccCChH-HHHHHHHHHHHcCCEEEecccc
Q psy12817 647 H-HVAEF---CIQHGKNLVTASYLSP-EMMALHERAASAGITVLNEVGL 690 (1201)
Q Consensus 647 ~-~Vaka---cIeaGkh~VD~Syvs~-e~~eLde~AkeAGVtil~e~Gl 690 (1201)
. .+... .++.+.-++|.|..++ ..+++.+.+++.|+.++. +.+
T Consensus 68 v~~~~~~l~~~~~~~~~iid~sT~~p~~~~~~~~~~~~~gi~~ld-apV 115 (156)
T d2cvza2 68 VYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLD-APV 115 (156)
T ss_dssp HHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEE-CCE
T ss_pred hhhhhccccccccccccccccccCCHHHHHHHHHHHHHcCCeEEe-ccc
Confidence 1 11222 2355667999987655 568899999999999874 444
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.58 E-value=9.6e-05 Score=74.18 Aligned_cols=100 Identities=11% Similarity=0.147 Sum_probs=69.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEeCCHHHHHHHHHHcCCeeEEEeecCC-------C--CchHHHhhccCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGSLLKEDIDKVTNEFGRVEATLIDVNN-------G--GSDNLSGLVRSA 634 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~V-tVadR~~ekAe~La~~~~~v~~v~lDV~D-------~--~~e~L~elI~~~ 634 (1201)
++||+|.|.|+|||.+++.+..+++++| .|.|.++......+..+ +......+-.. + ....+..+..++
T Consensus 2 ~irIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 80 (172)
T d2czca2 2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL-GIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (172)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT-TCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred cEEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhc-CceeecccccceeeecccCccccchhhhhhccC
Confidence 5799999999999999999999888884 56676654433333333 22222211100 0 012344556689
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
|+||.|+|.+...+-++..+++|+..|-.|.
T Consensus 81 DvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~ 111 (172)
T d2czca2 81 DIIVDATPGGIGAKNKPLYEKAGVKAIFQGG 111 (172)
T ss_dssp SEEEECCSTTHHHHHHHHHHHHTCEEEECTT
T ss_pred CEEEECCCCCCCHHHHHHHHHcCCCEEEECC
Confidence 9999999998888999999999999887664
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.57 E-value=0.00011 Score=76.81 Aligned_cols=78 Identities=17% Similarity=0.229 Sum_probs=68.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc---CCcEEE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR---SADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~---~~DVVI 638 (1201)
.+.|+++|.| ++.+|+.+++.|++. +.+|.+.+|+.++++++.++.+++.++.+|++| .+.++++++ ..|++|
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~g~iDilV 79 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD--WDATEKALGGIGPVDLLV 79 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHTTCCCCSEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCC--HHHHHHHHHHcCCCeEEE
Confidence 4568999999 689999999999987 589999999999999999999899999999998 888887776 479999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
|+...
T Consensus 80 nnAg~ 84 (242)
T d1cyda_ 80 NNAAL 84 (242)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99753
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.55 E-value=0.00018 Score=70.36 Aligned_cols=93 Identities=17% Similarity=0.178 Sum_probs=62.4
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDE-NIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~-~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
||||+|||+|.||..+++.|.+.+ ..+|+..|++++..+...+.- .+.... .+ . ......++|+||.|+|.
T Consensus 1 Mk~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~-~~~~~~---~~--~--~~~~~~~~dlIila~p~ 72 (171)
T d2g5ca2 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG-IIDEGT---TS--I--AKVEDFSPDFVMLSSPV 72 (171)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT-SCSEEE---SC--G--GGGGGTCCSEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhh-cchhhh---hh--h--hhhhccccccccccCCc
Confidence 789999999999999999998764 468999999998887655432 121111 11 1 12223479999999997
Q ss_pred cccHHHHHH---HHHcCCeEEEccC
Q psy12817 644 NLHHHVAEF---CIQHGKNLVTASY 665 (1201)
Q Consensus 644 ~~h~~Vaka---cIeaGkh~VD~Sy 665 (1201)
....++.+. .+..+.-++|.+-
T Consensus 73 ~~~~~vl~~l~~~~~~~~ii~d~~s 97 (171)
T d2g5ca2 73 RTFREIAKKLSYILSEDATVTDQGS 97 (171)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred hhhhhhhhhhhcccccccccccccc
Confidence 655444433 2344555666654
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=97.55 E-value=0.00017 Score=75.06 Aligned_cols=78 Identities=13% Similarity=0.176 Sum_probs=62.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-----HHHHHHH-HcCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-----DIDKVTN-EFGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-----kAe~La~-~~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
+++||+|+| +|++|+.+++.|.++ +++|++.+|+.. +++.+.. ...+++.+..|+.| .+.+.+.++++++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d--~~~~~~~~~~~~~ 78 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD--HQRLVDALKQVDV 78 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSC--HHHHHHHHTTCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeeccc--chhhhhhccCcch
Confidence 578899999 699999999999987 488999998642 2333222 12468899999998 8899999999999
Q ss_pred EEEcCCCc
Q psy12817 637 VVSLLPYN 644 (1201)
Q Consensus 637 VIs~lP~~ 644 (1201)
++++++..
T Consensus 79 ~~~~~~~~ 86 (312)
T d1qyda_ 79 VISALAGG 86 (312)
T ss_dssp EEECCCCS
T ss_pred hhhhhhhc
Confidence 99998653
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.54 E-value=0.00058 Score=65.92 Aligned_cols=107 Identities=15% Similarity=0.243 Sum_probs=78.9
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
||+|+| +|+||+.+++.+.+.+++++..+- |..+ +...+. -.++|+||+.+.+..
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~---------------------d~~~-~~~~~~--~~~~DvvIDFS~p~~ 56 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAEL---------------------DAGD-PLSLLT--DGNTEVVIDFTHPDV 56 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEE---------------------CTTC-CTHHHH--TTTCSEEEECCCTTT
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEE---------------------ecCC-chhhhc--cccCCEEEEcccHHH
Confidence 799999 699999999999988888865321 1111 111221 147999999997677
Q ss_pred cHHHHHHHHHcCCeEEEcc--CChHHHHHHHHH-HHHcCCEEEeccccCchhHHH
Q psy12817 646 HHHVAEFCIQHGKNLVTAS--YLSPEMMALHER-AASAGITVLNEVGLDPGIDHL 697 (1201)
Q Consensus 646 h~~VakacIeaGkh~VD~S--yvs~e~~eLde~-AkeAGVtil~e~GlDPGIdhm 697 (1201)
-...++.|+++|+++|.-+ |..++.+.|.+. ++++++.++..--|.-|+.-+
T Consensus 57 ~~~~~~~~~~~~~~~ViGTTG~~~~~~~~l~~~~~~~~~ipil~apNfSlGvnll 111 (135)
T d1yl7a1 57 VMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFTSFVPGV 111 (135)
T ss_dssp HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHSCTTCEEEECSCCGGGHHHH
T ss_pred HHHHHHHHHhcCCCEEEeccccchhHHHHHHHHHHhcCCCCEEEcCCccHHHHHH
Confidence 7899999999999988753 566667777664 456788888887888886544
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.50 E-value=0.00026 Score=71.93 Aligned_cols=126 Identities=14% Similarity=0.147 Sum_probs=83.2
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCee------------EEEeecCCCCchHHHhhcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVE------------ATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~------------~v~lDV~D~~~e~L~elI~ 632 (1201)
|||.|+|+|++|.+++..|++. +++|++.|.+.++.+.+.+.. |-.+ ...+.. ..++.+.++
T Consensus 1 MkI~ViGlG~vGl~~a~~la~~-g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~----~~~~~~~i~ 75 (202)
T d1mv8a2 1 MRISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG----TTDFKKAVL 75 (202)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----ESCHHHHHH
T ss_pred CEEEEECCCHhHHHHHHHHHhC-CCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhccccccc----CCCHHHHHh
Confidence 6899999999999999999986 579999999999988876432 0000 000001 124667788
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHH--cCCEEEeccccCchhHHHHHHHHHHHh
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAAS--AGITVLNEVGLDPGIDHLLAMECIDAA 706 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~Ake--AGVtil~e~GlDPGIdhmlA~~~idei 706 (1201)
++|+++.|+|..... .+ -.|.+++......+.+.++. .+..++.+.-+-||.+..+....+.+.
T Consensus 76 ~~d~i~i~VpTP~~~--------~~--~~d~~~~~~~~~~i~~~~~~~~~~~liii~STv~pGtt~~~~~~~l~~~ 141 (202)
T d1mv8a2 76 DSDVSFICVGTPSKK--------NG--DLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDC 141 (202)
T ss_dssp TCSEEEECCCCCBCT--------TS--SBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHH
T ss_pred hCCEEEEecCccccc--------cc--cccchhhhhhhhhhhheeecccCCcceeeccccCCcchhhhhhhhhhcc
Confidence 999999999865321 00 01222233333344333432 467888899999999888777766554
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.44 E-value=6.9e-05 Score=77.19 Aligned_cols=77 Identities=19% Similarity=0.334 Sum_probs=60.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
++++|+|.| +|++|+.++++|.+++.+ +|++.+|++.+... ....++.....|..+ .+.+.+.++++|+|++|+
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~--~~~~~i~~~~~D~~~--~~~~~~~~~~~d~vi~~~ 88 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE--EAYKNVNQEVVDFEK--LDDYASAFQGHDVGFCCL 88 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS--GGGGGCEEEECCGGG--GGGGGGGGSSCSEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc--cccceeeeeeecccc--cccccccccccccccccc
Confidence 357999999 799999999999987664 79999997654322 122357777788887 788999999999999998
Q ss_pred CCc
Q psy12817 642 PYN 644 (1201)
Q Consensus 642 P~~ 644 (1201)
...
T Consensus 89 ~~~ 91 (232)
T d2bkaa1 89 GTT 91 (232)
T ss_dssp CCC
T ss_pred ccc
Confidence 643
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=97.44 E-value=1.6e-05 Score=77.00 Aligned_cols=85 Identities=19% Similarity=0.174 Sum_probs=55.6
Q ss_pred EEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcccH
Q psy12817 568 VLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNLHH 647 (1201)
Q Consensus 568 VLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~h~ 647 (1201)
|.+||+|.||+++++.|.+. ...+.|.+|+.++++++++.+. ..+ ....++++++|+|+.|+|...-.
T Consensus 2 IgfIG~G~mg~~l~~~L~~~-~~~~~v~~R~~~~~~~l~~~~~-~~~----------~~~~~~~~~~DiVil~v~d~~i~ 69 (153)
T d2i76a2 2 LNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYG-GKA----------ATLEKHPELNGVVFVIVPDRYIK 69 (153)
T ss_dssp CEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTC-CCC----------CSSCCCCC---CEEECSCTTTHH
T ss_pred EEEEeCcHHHHHHHHHHHhC-CCEEEEEeCChhhhcchhhccc-ccc----------cchhhhhccCcEEEEeccchhhh
Confidence 67999999999999988552 2234689999999999998863 221 12345778899999999976545
Q ss_pred HHHHHHHHcCCeEEEcc
Q psy12817 648 HVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 648 ~VakacIeaGkh~VD~S 664 (1201)
+++...-..++-+++++
T Consensus 70 ~v~~~l~~~~~ivi~~s 86 (153)
T d2i76a2 70 TVANHLNLGDAVLVHCS 86 (153)
T ss_dssp HHHTTTCCSSCCEEECC
T ss_pred HHHhhhcccceeeeecc
Confidence 55443223455566654
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=97.44 E-value=0.00019 Score=77.60 Aligned_cols=79 Identities=13% Similarity=0.076 Sum_probs=62.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVT-NEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La-~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
++|+|+|+| +|++|+.+++.|.+. +++|++..|+.++..... ...++++.++.|+.| +.+.++.+++++|+++...
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d-~~~~~~~a~~~~~~~~~~~ 79 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLN-NVPLMDTLFEGAHLAFINT 79 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTT-CHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhC-CCeEEEEECCcchhhhhhhcccCCCEEEEeeCCC-cHHHHHHHhcCCceEEeec
Confidence 579999999 799999999999986 678999999876543221 234689999999988 4455778888999988877
Q ss_pred CCc
Q psy12817 642 PYN 644 (1201)
Q Consensus 642 P~~ 644 (1201)
+..
T Consensus 80 ~~~ 82 (350)
T d1xgka_ 80 TSQ 82 (350)
T ss_dssp CST
T ss_pred ccc
Confidence 643
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=97.40 E-value=0.00033 Score=75.44 Aligned_cols=75 Identities=15% Similarity=0.173 Sum_probs=58.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH----HHHHHHHH-HcCCeeEEEeecCCCCchHHHhhcc--CCcEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK----EDIDKVTN-EFGRVEATLIDVNNGGSDNLSGLVR--SADLV 637 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~----ekAe~La~-~~~~v~~v~lDV~D~~~e~L~elI~--~~DVV 637 (1201)
|||||+| +|++|+.+++.|+++ +++|++.||.. +....... ..++++.++.|+.| .+.+.++++ ++|+|
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~l~~~~~~~~~d~V 77 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN--EALMTEILHDHAIDTV 77 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC--HHHHHHHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCC--HHHHHHHHhccCCCEE
Confidence 6799999 799999999999987 58899887621 22222211 12478999999998 889999988 78999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
|++...
T Consensus 78 iHlAa~ 83 (338)
T d1udca_ 78 IHFAGL 83 (338)
T ss_dssp EECCSC
T ss_pred EECCCc
Confidence 998743
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.00015 Score=70.91 Aligned_cols=114 Identities=15% Similarity=0.140 Sum_probs=72.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhC---CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRD---ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~---~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
||||+|+| +|+||+.+++.|.++ +..+++....+...-+......... ...++.+ . ..++++|+|+.|
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~--~~~~~~~--~----~~~~~~DivF~a 72 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTG--TLQDAFD--L----EALKALDIIVTC 72 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCC--BCEETTC--H----HHHHTCSEEEEC
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCce--eeecccc--h----hhhhcCcEEEEe
Confidence 78999999 699999999987765 3445665554433221111111111 1122332 2 234689999999
Q ss_pred CCCcccHHHHHHHHHcCCe--EEEcc--C--------ChHHH-HHHHHHHHHcCCEEEe
Q psy12817 641 LPYNLHHHVAEFCIQHGKN--LVTAS--Y--------LSPEM-MALHERAASAGITVLN 686 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh--~VD~S--y--------vs~e~-~eLde~AkeAGVtil~ 686 (1201)
+|......++..+.++|+. ++|.| | +-|++ .+..+.++++|+.-+.
T Consensus 73 ~~~~~s~~~~~~~~~~g~~~~VID~Ss~fR~~~dvplviPEVN~~~i~~~~~~g~~~~i 131 (146)
T d1t4ba1 73 QGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFV 131 (146)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred cCchHHHHhhHHHHhcCCCeecccCCcccccCCCCcEECCCcCHHHHHHHHHcCCceEE
Confidence 9988888899999999975 89986 2 33444 2334556677765443
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=97.35 E-value=3.8e-05 Score=76.52 Aligned_cols=130 Identities=18% Similarity=0.231 Sum_probs=82.5
Q ss_pred cCCCeEEEEcC-chhHHHHHHHHHhCCCCeEE-EEeCCHHHH-HHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 563 EESRNVLLLGA-GYVSRPLIEYLHRDENIHIT-LGSLLKEDI-DKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 563 ~~mkKVLILGA-G~VG~~va~~La~~~~~~Vt-VadR~~ekA-e~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
.+.+||+|.|+ |+||+.+++.+.+.++++++ ..+|..... ..-...+.+....-..+ ...+.+.++.+||||+
T Consensus 2 ~s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~----~~~~~~~~~~~DViID 77 (162)
T d1diha1 2 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV----QSSLDAVKDDFDVFID 77 (162)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE----ESCSTTTTTSCSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCcee----eccHHHHhcccceEEE
Confidence 35689999995 99999999999998888854 344432210 00000000000000011 1234556678999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEeccccCchhHHHH
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNEVGLDPGIDHLL 698 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e~GlDPGIdhml 698 (1201)
-+.+..-.+.++.|.++|+++|.-+ +..++...+.+.+++.+ ++..--|.-|+-+++
T Consensus 78 Fs~p~~~~~~~~~a~~~~~~~ViGTTG~~~~~~~~i~~~a~~ip--i~~apN~SlGi~~~~ 136 (162)
T d1diha1 78 FTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIA--IVFAANFSMTFANGA 136 (162)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHTTTSC--EEECSCCCHHHHHHH
T ss_pred eccHHHHHHHHHHHHhccceeEEecCCCcHHHHHHHHHHcCCCC--EEEEccccHHHHHHH
Confidence 9976666788999999999998854 55566677766666544 454555556765443
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=97.33 E-value=0.00037 Score=71.63 Aligned_cols=92 Identities=14% Similarity=0.144 Sum_probs=69.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH------HHHHHHHH-cCCeeEEEeecCCCCchHHHhhccCCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE------DIDKVTNE-FGRVEATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e------kAe~La~~-~~~v~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
++|||+|+| +|++|+.+++.|.+. +++|++.+|+.. +++.+... ..+++.+..|+.+ ...+.+.++++|
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~ 78 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD--HASLVEAVKNVD 78 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTC--HHHHHHHHHTCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeeccc--chhhhhhhhhce
Confidence 579999999 699999999999987 578999998643 22222221 2468888889988 788888899999
Q ss_pred EEEEcCCCcc---cHHHHHHHHHcCC
Q psy12817 636 LVVSLLPYNL---HHHVAEFCIQHGK 658 (1201)
Q Consensus 636 VVIs~lP~~~---h~~VakacIeaGk 658 (1201)
.|+++.+... ...+.++|.++++
T Consensus 79 ~vi~~~~~~~~~~~~~~~~a~~~~~~ 104 (307)
T d1qyca_ 79 VVISTVGSLQIESQVNIIKAIKEVGT 104 (307)
T ss_dssp EEEECCCGGGSGGGHHHHHHHHHHCC
T ss_pred eeeecccccccchhhHHHHHHHHhcc
Confidence 9999986432 3556677766554
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=0.00032 Score=73.78 Aligned_cols=77 Identities=16% Similarity=0.170 Sum_probs=67.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|.+.+|+.+++++++++.+++.++.+|++| .++++++++ ..
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g~i 80 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFILCDVTQ--EDDVKTLVSETIRRFGRL 80 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhcCCCeEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence 3568999999 689999999999987 579999999999999999999889999999998 788877664 47
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|++||+..
T Consensus 81 DilVnnAG 88 (250)
T d1ydea1 81 DCVVNNAG 88 (250)
T ss_dssp CEEEECCC
T ss_pred CEEEeccc
Confidence 99999875
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=97.27 E-value=0.00038 Score=69.73 Aligned_cols=101 Identities=10% Similarity=0.172 Sum_probs=67.0
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeCCHHHHHHHHHHcCCeeEEEeecCC-------C--CchHHHhhccCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSLLKEDIDKVTNEFGRVEATLIDVNN-------G--GSDNLSGLVRSA 634 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR~~ekAe~La~~~~~v~~v~lDV~D-------~--~~e~L~elI~~~ 634 (1201)
|+||+|-|.|+|||.+++.+..+++.+|+ |.++++.......-.+ +.......-.. + ..-....+.+++
T Consensus 1 M~~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v 79 (171)
T d1cf2o1 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKK-GYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (171)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHT-TCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhc-CCceEecccccceeecccCcccCCChhHhhcCC
Confidence 78999999999999999999998888854 5666543322222222 11111110000 0 011344556789
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEccCC
Q psy12817 635 DLVVSLLPYNLHHHVAEFCIQHGKNLVTASYL 666 (1201)
Q Consensus 635 DVVIs~lP~~~h~~VakacIeaGkh~VD~Syv 666 (1201)
|+||.|+|.+...+-++.-+++|+.+|-.+..
T Consensus 80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~ 111 (171)
T d1cf2o1 80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE 111 (171)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred CEEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence 99999999887778888889999988776543
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.26 E-value=0.00026 Score=70.82 Aligned_cols=84 Identities=17% Similarity=0.116 Sum_probs=60.7
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC--HHHHHHHHHHc--CC----eeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL--KEDIDKVTNEF--GR----VEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~--~ekAe~La~~~--~~----v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
|||.|||+|.+|.+++..|++. +.+|++.+|. .+.++.+.... +. .....+.. .+++.++++++|+|
T Consensus 1 MkI~ViGaG~~GtalA~~la~~-g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~----~~~~~~~~~~ad~I 75 (180)
T d1txga2 1 MIVSILGAGAMGSALSVPLVDN-GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFW----PEQLEKCLENAEVV 75 (180)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH-CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEEC----GGGHHHHHTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccc----cccHHHHHhccchh
Confidence 7999999999999999999976 5689999884 44566665432 11 11112222 34688899999999
Q ss_pred EEcCCCcccHHHHHHHH
Q psy12817 638 VSLLPYNLHHHVAEFCI 654 (1201)
Q Consensus 638 Is~lP~~~h~~VakacI 654 (1201)
|.++|......+.+...
T Consensus 76 i~avps~~~~~~~~~l~ 92 (180)
T d1txga2 76 LLGVSTDGVLPVMSRIL 92 (180)
T ss_dssp EECSCGGGHHHHHHHHT
T ss_pred hcccchhhhHHHHHhhc
Confidence 99999877666666543
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.26 E-value=4.5e-05 Score=76.49 Aligned_cols=95 Identities=20% Similarity=0.338 Sum_probs=65.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEE-EEeCCH--HHHHHHHHHcC---Ce-eEEEeecCCCCchHHHhhccCCcE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHIT-LGSLLK--EDIDKVTNEFG---RV-EATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~Vt-VadR~~--ekAe~La~~~~---~v-~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
|+||+|+| +|++|+-+++.|..++.++|. +..+.. ..-+.+...++ +. .....+.. .......++|+
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dv 75 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMS-----DVRDFSADVDV 75 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEES-----CGGGTCTTCCE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccch-----hhhhhhcccce
Confidence 89999999 799999999999999999865 443321 11222222221 11 10111111 22334468999
Q ss_pred EEEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 637 VVSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 637 VIs~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
|+.|+|.....+.+....+.|+.++|.|
T Consensus 76 vf~alp~~~s~~~~~~~~~~~~~vIDlS 103 (179)
T d2g17a1 76 VFLATAHEVSHDLAPQFLQAGCVVFDLS 103 (179)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCEEEECS
T ss_pred eeccccchhHHHHhhhhhhcCceeeccc
Confidence 9999998887888999999999999987
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.22 E-value=0.00036 Score=72.90 Aligned_cols=77 Identities=14% Similarity=0.230 Sum_probs=65.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
.+.|+++|.| ++.+|+.+++.|++. +.+|.+.+|+.++++++++.+ ++.++.+|++| +++++++++ ..
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~-G~~V~~~~r~~~~l~~~~~~~-~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i 78 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAV-GAHPVVMDVAD--PASVERGFAEALAHLGRL 78 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTT-TCEEEECCTTC--HHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHc-CCeEEEEecCC--HHHHHHHHHHHHHhcCCc
Confidence 3568899999 689999999999987 578999999999999998877 68889999998 788776653 47
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|++||+...
T Consensus 79 DilVnnAG~ 87 (242)
T d1ulsa_ 79 DGVVHYAGI 87 (242)
T ss_dssp CEEEECCCC
T ss_pred eEEEECCcc
Confidence 999999753
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=97.18 E-value=0.00029 Score=73.43 Aligned_cols=104 Identities=16% Similarity=0.216 Sum_probs=75.8
Q ss_pred ccccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHH----HHcCCeeEEE
Q psy12817 560 IQTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVT----NEFGRVEATL 616 (1201)
Q Consensus 560 ~~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La----~~~~~v~~v~ 616 (1201)
++..+..||+|+|+|.+|..++.+|++.+--+++++|.+. .|++.++ +..|++....
T Consensus 25 Q~kL~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~ 104 (247)
T d1jw9b_ 25 QEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITP 104 (247)
T ss_dssp HHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHhCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhh
Confidence 3445678999999999999999999998766799988431 1444333 3346666555
Q ss_pred eecCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEcc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGkh~VD~S 664 (1201)
.+..- ..+.....+.+.|+||+|++.. ....+.+.|.+++++++..+
T Consensus 105 ~~~~~-~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip~i~g~ 152 (247)
T d1jw9b_ 105 VNALL-DDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGA 152 (247)
T ss_dssp ECSCC-CHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEE
T ss_pred hhhhh-hhccccccccccceeeeccchhhhhhhHHHHHHHhCCCccccc
Confidence 55432 2456777888999999999653 44677889999999988864
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.15 E-value=0.00057 Score=71.79 Aligned_cols=78 Identities=19% Similarity=0.285 Sum_probs=66.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.++++++++++ +++.++.+|++| +++++++++ .
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~~~g~ 79 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVRE-GARVAIADINLEAARATAAEIGPAACAIALDVTD--QASIDRCVAELLDRWGS 79 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHT-TEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCC--HHHHHHHHHHHHHHhCC
Confidence 3468899999 689999999999997 579999999999999998887 357889999998 888877654 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|++||+...
T Consensus 80 iDilVnnAg~ 89 (256)
T d1k2wa_ 80 IDILVNNAAL 89 (256)
T ss_dssp CCEEEECCCC
T ss_pred ccEEEeeccc
Confidence 7999999753
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.15 E-value=6.5e-05 Score=72.66 Aligned_cols=83 Identities=11% Similarity=0.022 Sum_probs=54.0
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
|||+|||+|.||..++..|++. +++|++.+|+.++.+.+.....+.......+. ....+.+..+|+||.+++...
T Consensus 1 MkI~IiGaG~iG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~iii~vka~~ 75 (167)
T d1ks9a2 1 MKITVLGCGALGQLWLTALCKQ-GHEVQGWLRVPQPYCSVNLVETDGSIFNESLT----ANDPDFLATSDLLLVTLKAWQ 75 (167)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCSEEEEEEECTTSCEEEEEEE----ESCHHHHHTCSEEEECSCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCceEEEEcCHHHhhhhccccCCccccccccc----cchhhhhcccceEEEeecccc
Confidence 7999999999999999999986 57999999988755432211111111111111 112234468999999998765
Q ss_pred cHHHHHHH
Q psy12817 646 HHHVAEFC 653 (1201)
Q Consensus 646 h~~Vakac 653 (1201)
...+++.+
T Consensus 76 ~~~~~~~l 83 (167)
T d1ks9a2 76 VSDAVKSL 83 (167)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHhh
Confidence 55555443
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.14 E-value=0.0005 Score=74.42 Aligned_cols=75 Identities=17% Similarity=0.260 Sum_probs=58.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+.|||+|.| +|++|+.++++|.++ +++|+++|+..... ........+....|+.+ .+.+.++++++|.||++..
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~-g~~V~~~d~~~~~~--~~~~~~~~~~~~~D~~~--~~~~~~~~~~~d~Vih~a~ 88 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHE-GHYVIASDWKKNEH--MTEDMFCDEFHLVDLRV--MENCLKVTEGVDHVFNLAA 88 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSS--SCGGGTCSEEEECCTTS--HHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEeCCCccc--hhhhcccCcEEEeechh--HHHHHHHhhcCCeEeeccc
Confidence 578999999 899999999999986 57899888754321 11222356778889987 7888888899999999984
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 89 ~ 89 (363)
T d2c5aa1 89 D 89 (363)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.13 E-value=0.0012 Score=63.47 Aligned_cols=82 Identities=17% Similarity=0.229 Sum_probs=63.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
..|+||+||| .|.||+.+++.|.+. +++|++.||+.+. ..+..+.++|+++.++
T Consensus 7 ~~~~kI~iIGg~G~mG~~la~~L~~~-G~~V~~~d~~~~~------------------------~~~~~~~~~~~v~~~~ 61 (152)
T d2pv7a2 7 SDIHKIVIVGGYGKLGGLFARYLRAS-GYPISILDREDWA------------------------VAESILANADVVIVSV 61 (152)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTCGG------------------------GHHHHHTTCSEEEECS
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHc-CCCcEeccccccc------------------------ccchhhhhcccccccc
Confidence 5689999999 899999999999876 6899999986532 2233456799999999
Q ss_pred CCcccHHHHHHHHH---cCCeEEEccCChHH
Q psy12817 642 PYNLHHHVAEFCIQ---HGKNLVTASYLSPE 669 (1201)
Q Consensus 642 P~~~h~~VakacIe---aGkh~VD~Syvs~e 669 (1201)
|......+...... .++.++|.+-+.+.
T Consensus 62 ~~~~~~~v~~~~~~~~~~~~iiiD~~Svk~~ 92 (152)
T d2pv7a2 62 PINLTLETIERLKPYLTENMLLADLTSVKRE 92 (152)
T ss_dssp CGGGHHHHHHHHGGGCCTTSEEEECCSCCHH
T ss_pred chhhheeeeecccccccCCceEEEecccCHH
Confidence 98776677666653 56778888765544
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.10 E-value=0.00061 Score=71.38 Aligned_cols=78 Identities=14% Similarity=0.220 Sum_probs=65.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|++.+|+.+++++++++++ ++.++.+|++| +++++++++ .
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~ 80 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFGG 80 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhCcceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 4568899999 689999999999987 5789999999999999988773 47788999998 777776653 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|++||+...
T Consensus 81 idilinnAG~ 90 (244)
T d1nffa_ 81 LHVLVNNAGI 90 (244)
T ss_dssp CCEEEECCCC
T ss_pred CeEEEECCcc
Confidence 7999999854
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=97.07 E-value=0.00065 Score=70.97 Aligned_cols=78 Identities=13% Similarity=0.251 Sum_probs=65.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|.+.+|+.+++++++++++ ++..+.+|++| .++++++++ .
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~ 78 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAAR-GAKVIGTATSENGAQAISDYLGANGKGLMLNVTD--PASIESVLEKIRAEFGE 78 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHTCS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC--HHHhhhhhhhhhcccCC
Confidence 4568888889 689999999999987 5799999999999999988763 47788999998 777766654 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|++||+...
T Consensus 79 iDilVnnAg~ 88 (243)
T d1q7ba_ 79 VDILVNNAGI 88 (243)
T ss_dssp CSEEEECCCC
T ss_pred cceehhhhhh
Confidence 8999999743
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.05 E-value=0.00088 Score=70.56 Aligned_cols=78 Identities=18% Similarity=0.216 Sum_probs=66.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|++++|+.++++++.++++ ++.++++|++| .++++++++ .
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~ 79 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQHLDVTI--EEDWQRVVAYAREEFGS 79 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCceEEEEcccCC--HHHHHHHHHHHHHHcCC
Confidence 4678999999 689999999999987 5789999999999999888763 47889999998 777776653 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|++||+...
T Consensus 80 iDilVnnAg~ 89 (254)
T d1hdca_ 80 VDGLVNNAGI 89 (254)
T ss_dssp CCEEEECCCC
T ss_pred ccEEEecCcc
Confidence 8999999853
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.03 E-value=0.001 Score=69.97 Aligned_cols=79 Identities=14% Similarity=0.244 Sum_probs=64.5
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
..+.|.++|.| ++.+|+.+|+.|++. +.+|++++|+.++++++++++ .++.++++|++| +++++++++
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~-G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~--~~~v~~~v~~~ 83 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAI 83 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC--HHHHHHHHHHH
Confidence 35678899999 689999999999987 578999999999988877654 146678999998 777776653
Q ss_pred -----CCcEEEEcCCC
Q psy12817 633 -----SADLVVSLLPY 643 (1201)
Q Consensus 633 -----~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 84 ~~~~g~iD~lVnnAg~ 99 (257)
T d1xg5a_ 84 RSQHSGVDICINNAGL 99 (257)
T ss_dssp HHHHCCCSEEEECCCC
T ss_pred HHhcCCCCEEEecccc
Confidence 57999999854
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=97.03 E-value=0.00087 Score=70.23 Aligned_cols=75 Identities=20% Similarity=0.329 Sum_probs=61.1
Q ss_pred CeE-EEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 566 RNV-LLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 566 kKV-LILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
||| +|.| ++.+|+.+++.|++. +.+|.+.+|+.++++++++++ .++.++.+|++| .++++++++
T Consensus 1 KKValITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g 77 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD--RDQVFAAVEQARKTLG 77 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHTT
T ss_pred CCEEEEcCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHHhC
Confidence 566 6668 689999999999997 579999999999988877654 357788999998 777776653
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 78 ~iDilVnnAG~ 88 (255)
T d1gega_ 78 GFDVIVNNAGV 88 (255)
T ss_dssp CCCEEEECCCC
T ss_pred CccEEEecccc
Confidence 58999999753
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=97.02 E-value=0.00067 Score=73.11 Aligned_cols=75 Identities=23% Similarity=0.485 Sum_probs=56.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCC-CCeEEEEeCC-----HHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDE-NIHITLGSLL-----KEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~-~~~VtVadR~-----~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
+||||||.| +|++|+.++++|.+.+ .++|++.|+. ....+.+. .++++.+..|+.| .+.+.+++..+|.
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~--~~~i~~~~~Di~d--~~~~~~~~~~~~~ 76 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIAD--AELVDKLAAKADA 76 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTC--HHHHHHHHTTCSE
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh--cCCeEEEEccCCC--HHHHHHHHhhhhh
Confidence 589999999 7999999999998764 3556666531 12211111 1468899999998 8999999999999
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
|+.+.-
T Consensus 77 v~~~a~ 82 (346)
T d1oc2a_ 77 IVHYAA 82 (346)
T ss_dssp EEECCS
T ss_pred hhhhhh
Confidence 988864
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=97.01 E-value=0.00048 Score=68.78 Aligned_cols=77 Identities=22% Similarity=0.304 Sum_probs=63.0
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC-eeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR-VEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~-v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
+...-||+|||+|.+|...++...+. +.+|++.|.+.++.+++...+++ ++.. ..+ .+.+.+.++++|+||.+
T Consensus 29 gv~pa~V~ViGaGvaG~~A~~~A~~l-GA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~--~~~l~~~~~~aDivI~a 102 (168)
T d1pjca1 29 GVKPGKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGSRVELL---YSN--SAEIETAVAEADLLIGA 102 (168)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGSEEE---ECC--HHHHHHHHHTCSEEEEC
T ss_pred CCCCcEEEEECCChHHHHHHHHHhhC-CCEEEEEeCcHHHHHHHHHhhcccceee---hhh--hhhHHHhhccCcEEEEe
Confidence 44578999999999999999998887 57899999999999998887643 3332 233 67899999999999999
Q ss_pred C--CCc
Q psy12817 641 L--PYN 644 (1201)
Q Consensus 641 l--P~~ 644 (1201)
+ |..
T Consensus 103 alipG~ 108 (168)
T d1pjca1 103 VLVPGR 108 (168)
T ss_dssp CCCTTS
T ss_pred eecCCc
Confidence 7 543
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.01 E-value=0.00014 Score=73.27 Aligned_cols=94 Identities=15% Similarity=0.167 Sum_probs=61.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|+||.|+| +|++|+-+++.|.+++.+++..+..+...-+.+...+|+... ..++.. ...++..+++|+|+.|+|.
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~-~~~~~~---~~~~~~~~~~dvvf~a~p~ 76 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLE-NSILSE---FDPEKVSKNCDVLFTALPA 76 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCC-CCBCBC---CCHHHHHHHCSEEEECCST
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhc-cccccc---cCHhHhccccceEEEcccc
Confidence 78999999 799999999999999999966543332323334433332210 112221 2234444589999999997
Q ss_pred cccHHHHHHHHHcCCeEEEcc
Q psy12817 644 NLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 644 ~~h~~VakacIeaGkh~VD~S 664 (1201)
....+.+.. ..++.+||.|
T Consensus 77 ~~s~~~~~~--~~~~~VIDlS 95 (176)
T d1vkna1 77 GASYDLVRE--LKGVKIIDLG 95 (176)
T ss_dssp THHHHHHTT--CCSCEEEESS
T ss_pred HHHHHHHHh--hccceEEecC
Confidence 655454443 3678899987
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=97.00 E-value=0.00058 Score=74.34 Aligned_cols=74 Identities=20% Similarity=0.246 Sum_probs=54.8
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-----HHHHHHHH----HcCCeeEEEeecCCCCchHHHhhccCC-
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-----EDIDKVTN----EFGRVEATLIDVNNGGSDNLSGLVRSA- 634 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-----ekAe~La~----~~~~v~~v~lDV~D~~~e~L~elI~~~- 634 (1201)
|+|||.| +|++|+.++++|.+. +++|++++|.. ++++.+.. ..++++.+..|+.| .+.+.+.++++
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~ 78 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSD--TSNLTRILREVQ 78 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECC---------------------CCEEECCCCSSC--HHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCC--HHHHHHHHhccC
Confidence 6888999 899999999999987 68999999853 33333222 12468888999998 89999999854
Q ss_pred -cEEEEcCC
Q psy12817 635 -DLVVSLLP 642 (1201)
Q Consensus 635 -DVVIs~lP 642 (1201)
|+|++|..
T Consensus 79 ~d~v~h~aa 87 (357)
T d1db3a_ 79 PDEVYNLGA 87 (357)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEeec
Confidence 99999974
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.00 E-value=0.0012 Score=69.18 Aligned_cols=78 Identities=19% Similarity=0.266 Sum_probs=64.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.++++++++++ .++.++.+|++| +++++++++
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~-Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~ 84 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK--KEEISEVINKILTE 84 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHh
Confidence 4567888889 689999999999976 579999999999998877654 357889999998 788776664
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++||+.+.
T Consensus 85 ~g~iDilvnnag~ 97 (251)
T d2c07a1 85 HKNVDILVNNAGI 97 (251)
T ss_dssp CSCCCEEEECCCC
T ss_pred cCCceeeeecccc
Confidence 58999998754
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.00 E-value=0.00093 Score=70.33 Aligned_cols=78 Identities=14% Similarity=0.176 Sum_probs=62.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|+++|.| ++.+|+.+++.|++. +.+|.+.+|++++++++.+.+ ..+.++.+|+++ .++++++++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~-G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~--~~~~~~~~~~~~~~ 80 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHV 80 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC--HHHHHHHHHHHHHH
Confidence 4679999999 799999999999987 479999999998888776654 346778899998 777655542
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|+|||+.+.
T Consensus 81 ~~g~idilinnag~ 94 (258)
T d1ae1a_ 81 FDGKLNILVNNAGV 94 (258)
T ss_dssp TTSCCCEEEECCCC
T ss_pred hCCCcEEEeccccc
Confidence 37999998753
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.99 E-value=0.0011 Score=69.37 Aligned_cols=78 Identities=18% Similarity=0.165 Sum_probs=63.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|.+.+|+.+++++.++++ .++.++.+|++| +++++++++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~ 79 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKE 79 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4578999999 689999999999997 579999999998877655433 246778999998 777776653
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 80 ~~g~iDiLVnnAG~ 93 (251)
T d1vl8a_ 80 KFGKLDTVVNAAGI 93 (251)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 58999999854
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.0015 Score=68.43 Aligned_cols=81 Identities=12% Similarity=0.203 Sum_probs=66.5
Q ss_pred cccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 561 QTEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 561 ~~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
++...|.|+|-| ++.+|+.+++.|++. +.+|.+++|+.++++++++++ +++..+.+|++| .+.++++++
T Consensus 3 ~~l~Gkv~lITGas~GIG~~ia~~la~~-G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~ 79 (244)
T d1yb1a_ 3 KSVTGEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN--REDIYSSAKKVK 79 (244)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHH
Confidence 345678899999 688999999999987 589999999999998887765 357889999998 777776653
Q ss_pred ----CCcEEEEcCCCc
Q psy12817 633 ----SADLVVSLLPYN 644 (1201)
Q Consensus 633 ----~~DVVIs~lP~~ 644 (1201)
..|++||+....
T Consensus 80 ~~~g~idilinnag~~ 95 (244)
T d1yb1a_ 80 AEIGDVSILVNNAGVV 95 (244)
T ss_dssp HHTCCCSEEEECCCCC
T ss_pred HHcCCCceeEeecccc
Confidence 589999998643
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=96.97 E-value=0.0012 Score=69.59 Aligned_cols=77 Identities=17% Similarity=0.320 Sum_probs=64.9
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhcc------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|++++|+.++++++++++. .+.++.+|++| +++++++++
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~ 80 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK--DEDVRNLVDTTIAKH 80 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4568899999 689999999999987 5789999999999999887763 46778899998 788877664
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
..|++||+..
T Consensus 81 g~iD~lVnnAG 91 (268)
T d2bgka1 81 GKLDIMFGNVG 91 (268)
T ss_dssp SCCCEEEECCC
T ss_pred CCcceeccccc
Confidence 5899999875
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.95 E-value=0.0012 Score=63.10 Aligned_cols=89 Identities=16% Similarity=0.262 Sum_probs=63.0
Q ss_pred CeEEEEcC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCCc
Q psy12817 566 RNVLLLGA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILGA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~~ 644 (1201)
|||+|.|+ |+||+.+++.+.++ ++++... +|... .+.+.++|+||+-+.+.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~-~~~l~~~---------------------id~~~------~~~~~~~DVvIDFS~p~ 52 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEK-GHELVLK---------------------VDVNG------VEELDSPDVVIDFSSPE 52 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEE---------------------EETTE------EEECSCCSEEEECSCGG
T ss_pred CEEEEECCCCHHHHHHHHHHhcC-CCeEEEE---------------------ECCCc------HHHhccCCEEEEecCHH
Confidence 68999995 99999998877654 4554321 11111 12345799999999777
Q ss_pred ccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCC
Q psy12817 645 LHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGI 682 (1201)
Q Consensus 645 ~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGV 682 (1201)
.-...++.|+++|+++|.-+ |..+..+.+.+.+++..+
T Consensus 53 ~~~~~l~~~~~~~~p~ViGTTG~~~~~~~~i~~~ak~~pv 92 (128)
T d1vm6a3 53 ALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKEVPV 92 (128)
T ss_dssp GHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTTSEE
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHHHhhCCE
Confidence 77899999999999988753 555666777666655433
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.93 E-value=0.00025 Score=69.03 Aligned_cols=91 Identities=19% Similarity=0.104 Sum_probs=62.5
Q ss_pred CCeEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
++||+|+| +|++|+-+++.|.+ .+..++..+..+...-+.+.... -.....+.. .+...++|+|+.|+
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~--~~~~~~~~~-------~~~~~~~d~vf~a~ 72 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAE--SSLRVGDVD-------SFDFSSVGLAFFAA 72 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETT--EEEECEEGG-------GCCGGGCSEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeecc--ccchhccch-------hhhhccceEEEecC
Confidence 58999999 69999999999974 46778766543333222221111 111111111 22346799999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEcc
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~S 664 (1201)
|......++....++|+.++|.|
T Consensus 73 p~~~s~~~~~~~~~~g~~VID~S 95 (144)
T d2hjsa1 73 AAEVSRAHAERARAAGCSVIDLS 95 (144)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETT
T ss_pred CcchhhhhccccccCCceEEeec
Confidence 98877888999999999999986
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=96.93 E-value=0.00075 Score=71.18 Aligned_cols=73 Identities=19% Similarity=0.375 Sum_probs=57.2
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC--H---HHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEE
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL--K---EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVV 638 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~--~---ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVI 638 (1201)
||||.| +|++|+.+++.|.++ +++|++.|+- . ++.+.+ ...++++.+..|+.| .+.+.+++++ .|+||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~-g~~V~~id~~~~~~~~~~~~~~-~~~~~~~~i~~Di~~--~~~l~~~~~~~~~d~Vi 77 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWL-SSLGNFEFVHGDIRN--KNDVTRLITKYMPDSCF 77 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSTTHHHHHHHH-HTTCCCEEEECCTTC--HHHHHHHHHHHCCSEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCCcccchhHHHHh-hccCCcEEEEcccCC--HHHHHHHHHhcCCceEE
Confidence 899999 799999999999987 5789888742 1 122222 335689999999998 8899998876 49999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
+|.-.
T Consensus 78 h~aa~ 82 (338)
T d1orra_ 78 HLAGQ 82 (338)
T ss_dssp ECCCC
T ss_pred eeccc
Confidence 99743
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=96.91 E-value=0.0012 Score=69.06 Aligned_cols=78 Identities=8% Similarity=0.110 Sum_probs=65.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|++++|+.++++++++.. .++.++.+|++| .++++++++
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~ 80 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD--EDGWTKLFDATEKAF 80 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4568889999 789999999999987 578999999999999888765 357889999998 777776654
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 81 G~iDiLVnnAg~ 92 (251)
T d1zk4a1 81 GPVSTLVNNAGI 92 (251)
T ss_dssp SSCCEEEECCCC
T ss_pred CCceEEEecccc
Confidence 47999999854
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=96.90 E-value=0.0016 Score=68.52 Aligned_cols=77 Identities=17% Similarity=0.240 Sum_probs=63.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.++++++.+.+ .++.++.+|++| .++++++++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 79 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRD 79 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 3568999999 689999999999987 578999999999988877654 257789999998 777776653
Q ss_pred --CCcEEEEcCC
Q psy12817 633 --SADLVVSLLP 642 (1201)
Q Consensus 633 --~~DVVIs~lP 642 (1201)
..|++||+..
T Consensus 80 ~g~iDilVnnaG 91 (260)
T d1zema1 80 FGKIDFLFNNAG 91 (260)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCCCeehhhhc
Confidence 5899999875
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.90 E-value=0.00065 Score=60.76 Aligned_cols=89 Identities=17% Similarity=0.234 Sum_probs=56.8
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-CCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.|||+|+|+|..|..++++|.+. +.+|++.|.+..... .... ..+... +.-.+ . ..+.+.|.||-.-
T Consensus 3 ~~~K~v~ViGlG~sG~s~a~~L~~~-g~~v~~~D~~~~~~~--~~~~~~~~~~~-~~~~~--~----~~~~~~d~vi~SP 72 (93)
T d2jfga1 3 YQGKNVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRMTPPG--LDKLPEAVERH-TGSLN--D----EWLMAADLIVASP 72 (93)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEESSSSCTT--GGGSCTTSCEE-ESBCC--H----HHHHHCSEEEECT
T ss_pred cCCCEEEEEeECHHHHHHHHHHHHC-CCEEEEeeCCcCchh--HHHHhhcccee-ecccc--h----hhhccCCEEEECC
Confidence 5678999999999999999999987 578999998554211 1111 123322 21111 2 2345789888864
Q ss_pred CCcccHHHHHHHHHcCCeEE
Q psy12817 642 PYNLHHHVAEFCIQHGKNLV 661 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~V 661 (1201)
....+.++++.|.++|+.++
T Consensus 73 Gi~~~~~~~~~a~~~gi~ii 92 (93)
T d2jfga1 73 GIALAHPSLSAAADAGIEIV 92 (93)
T ss_dssp TSCTTSHHHHHHHHTTCEEE
T ss_pred CCCCCCHHHHHHHHcCCCeE
Confidence 33444566666777776654
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.88 E-value=0.0027 Score=68.16 Aligned_cols=75 Identities=16% Similarity=0.273 Sum_probs=56.7
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC----HHHHHHHHH-HcCCeeEEEeecCCCCchHHHhhcc--CCcEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL----KEDIDKVTN-EFGRVEATLIDVNNGGSDNLSGLVR--SADLV 637 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~----~ekAe~La~-~~~~v~~v~lDV~D~~~e~L~elI~--~~DVV 637 (1201)
|.|||.| +|++|+.+++.|+++ +++|+++|+. .+....... ...+++.+..|+.| .+.++++++ ++|+|
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~l~~~~~~~~~d~V 78 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD--RKGLEKVFKEYKIDSV 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTC--HHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-cCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCC--HHHHHHHHhccCCCEE
Confidence 4599999 799999999999987 5789888752 122222221 12468899999998 888988877 78999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
|+|...
T Consensus 79 ihlAa~ 84 (347)
T d1z45a2 79 IHFAGL 84 (347)
T ss_dssp EECCSC
T ss_pred EEcccc
Confidence 999743
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.87 E-value=0.0031 Score=61.62 Aligned_cols=123 Identities=14% Similarity=0.173 Sum_probs=79.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-----cCCcEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-----RSADLVV 638 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-----~~~DVVI 638 (1201)
...+|+|+|+|.+|..++..+...+..+|+++|+++++.+. ++++ ++..+. +..+.+.....+.+ .++|+||
T Consensus 26 ~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~-a~~~-Ga~~~~-~~~~~~~~~~~~~~~~~~g~g~Dvvi 102 (171)
T d1pl8a2 26 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK-AKEI-GADLVL-QISKESPQEIARKVEGQLGCKPEVTI 102 (171)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHT-TCSEEE-ECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHH-HHHh-CCcccc-cccccccccccccccccCCCCceEEE
Confidence 34689999999999999998887765589999999998875 5566 444332 22220233333333 2589999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEccCChHH-HHHHHHHHHHcCCEEEecccc
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTASYLSPE-MMALHERAASAGITVLNEVGL 690 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~Syvs~e-~~eLde~AkeAGVtil~e~Gl 690 (1201)
+|++.....+.+..+++.|-.++-.....+. .-.+.. .-.+++++....+.
T Consensus 103 d~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~-~~~k~l~i~Gs~~~ 154 (171)
T d1pl8a2 103 ECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLH-AAIREVDIKGVFRY 154 (171)
T ss_dssp ECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHH-HHHTTCEEEECCSC
T ss_pred eccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHH-HHHCCcEEEEEeCC
Confidence 9998766667777777878777776532110 001111 12357777766554
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=96.86 E-value=0.00042 Score=74.35 Aligned_cols=78 Identities=14% Similarity=0.247 Sum_probs=62.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH---cCCeeEEEeecCCCCchHHHhhcc--CCcEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE---FGRVEATLIDVNNGGSDNLSGLVR--SADLV 637 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~---~~~v~~v~lDV~D~~~e~L~elI~--~~DVV 637 (1201)
+.|||+|.| +|++|+.+++.|.+. +++|.+.+|+......+... .++++.+..|+.| .+.+.++++ ..|+|
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~~~l~~~~~~~~~~~v 83 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD--QNKLLESIREFQPEIV 83 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC--HHHHHHHHHHHCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccC--hHhhhhhhhhchhhhh
Confidence 569999999 799999999999987 57899999977644333222 2478999999998 888888876 46899
Q ss_pred EEcCCCc
Q psy12817 638 VSLLPYN 644 (1201)
Q Consensus 638 Is~lP~~ 644 (1201)
+.+....
T Consensus 84 ~~~aa~~ 90 (356)
T d1rkxa_ 84 FHMAAQP 90 (356)
T ss_dssp EECCSCC
T ss_pred hhhhccc
Confidence 9988644
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.86 E-value=0.00084 Score=69.77 Aligned_cols=76 Identities=16% Similarity=0.206 Sum_probs=60.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHH---HHcCCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVT---NEFGRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La---~~~~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
||+|+|-| ++.+|+.+++.|++ ..+.+|++++|+.++++++. +..+++.++.+|++| .++++++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN--FDAYDKLVADIEGVT 79 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC--GGGHHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc--HHHHHHHHhhhHHHh
Confidence 88999999 58999999999975 45789999999998766554 345678999999998 766665433
Q ss_pred ---CCcEEEEcCC
Q psy12817 633 ---SADLVVSLLP 642 (1201)
Q Consensus 633 ---~~DVVIs~lP 642 (1201)
..|++||...
T Consensus 80 ~~~~iDiLvnNAg 92 (248)
T d1snya_ 80 KDQGLNVLFNNAG 92 (248)
T ss_dssp GGGCCSEEEECCC
T ss_pred hcCCcceEEeecc
Confidence 4799999864
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=96.85 E-value=0.0014 Score=64.57 Aligned_cols=103 Identities=17% Similarity=0.271 Sum_probs=69.1
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
++.-.+|+|+|+|.+|+...+.+...|+. .+.|+.....+-+.+..+.|+... .|.
T Consensus 21 ~l~~~~ilviGaG~~g~~v~~~L~~~g~~---------------~i~v~nRt~~ka~~l~~~~~~~~~---------~~~ 76 (159)
T d1gpja2 21 SLHDKTVLVVGAGEMGKTVAKSLVDRGVR---------------AVLVANRTYERAVELARDLGGEAV---------RFD 76 (159)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCS---------------EEEEECSSHHHHHHHHHHHTCEEC---------CGG
T ss_pred CcccCeEEEECCCHHHHHHHHHHHhcCCc---------------EEEEEcCcHHHHHHHHHhhhcccc---------cch
Confidence 35678999999999999999999887743 466777665565556555554321 122
Q ss_pred chhhhhcCCcCcEEEEceecCCCCC-cccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeecc
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSP-KLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISA 337 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~P-rLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~ 337 (1201)
.+. +.+..+||||+|.. +| .+|+.++++..|+... .+.| .+|+|++.
T Consensus 77 -~~~-~~l~~~Divi~ats----s~~~ii~~~~i~~~~~~r~-------~~~~------~~iiDlav 124 (159)
T d1gpja2 77 -ELV-DHLARSDVVVSATA----APHPVIHVDDVREALRKRD-------RRSP------ILIIDIAN 124 (159)
T ss_dssp -GHH-HHHHTCSEEEECCS----SSSCCBCHHHHHHHHHHCS-------SCCC------EEEEECCS
T ss_pred -hHH-HHhccCCEEEEecC----CCCccccHhhhHHHHHhcc-------cCCC------eEEEeecC
Confidence 122 34668999999965 44 4799999987654320 0112 79999963
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.84 E-value=0.0021 Score=61.78 Aligned_cols=114 Identities=16% Similarity=0.087 Sum_probs=78.8
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc--CCeeEEEeecCCCCchHHHhh-ccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF--GRVEATLIDVNNGGSDNLSGL-VRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~--~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~l 641 (1201)
+-.|+|+|+|.+|+.+++.|.+. +.++++++.++++..+..... .++.++..|.+| ++.|+++ +.++|+||.++
T Consensus 3 knHiII~G~g~~g~~l~~~L~~~-~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d--~~~L~~a~i~~a~~vi~~~ 79 (153)
T d1id1a_ 3 KDHFIVCGHSILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSND--SSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTS--HHHHHHHTTTTCSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcc--hHHHHHhccccCCEEEEcc
Confidence 45799999999999999999886 578999999987655444332 468899999998 7777654 67899999999
Q ss_pred CCccc-HHHHHHHHHc--CCeEEEccCChHHHHHHHHHHHHcCCEEE
Q psy12817 642 PYNLH-HHVAEFCIQH--GKNLVTASYLSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 642 P~~~h-~~VakacIea--Gkh~VD~Syvs~e~~eLde~AkeAGVtil 685 (1201)
+.... ..++..|-+. .++++........... .+++|+..+
T Consensus 80 ~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~----l~~~Gad~v 122 (153)
T d1id1a_ 80 DNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNK----IKMVHPDII 122 (153)
T ss_dssp SCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHH----HHTTCCSEE
T ss_pred ccHHHHHHHHHHHHHhCCCCceEEEEcCHHHHHH----HHHCCCCEE
Confidence 86533 3333444342 3456655444333333 466787443
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.83 E-value=0.00028 Score=69.09 Aligned_cols=91 Identities=21% Similarity=0.178 Sum_probs=58.7
Q ss_pred CeEEEEc-CchhHHHHHHHHHhC---CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRD---ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~---~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
|||+||| +|++|+-+++.|.++ +..++..++.+.. +.+... +.+-.....+..+ .+.++++|+|+.|+
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~-~gk~~~-~~~~~~~~~~~~~------~~~~~~~DvvF~al 72 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQI-GVPAPN-FGKDAGMLHDAFD------IESLKQLDAVITCQ 72 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCC-SSBCCC-SSSCCCBCEETTC------HHHHTTCSEEEECS
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccc-cccccc-cCCcceeeecccc------hhhhccccEEEEec
Confidence 6899999 799999999988754 3456654443321 111111 1011111111122 13357899999999
Q ss_pred CCcccHHHHHHHHHcCCe--EEEcc
Q psy12817 642 PYNLHHHVAEFCIQHGKN--LVTAS 664 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh--~VD~S 664 (1201)
|.....+++..+.++|+. ++|.|
T Consensus 73 p~~~s~~~~~~l~~~g~~~~VIDlS 97 (147)
T d1mb4a1 73 GGSYTEKVYPALRQAGWKGYWIDAA 97 (147)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEESS
T ss_pred CchHHHHHhHHHHHcCCceEEEeCC
Confidence 988888999999999976 99987
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.83 E-value=0.0015 Score=68.57 Aligned_cols=78 Identities=14% Similarity=0.262 Sum_probs=64.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|++.+|+.++++++++++ .++.++.+|++| +++++++++
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~--~~~~~~~~~~~~~~ 85 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFAISK 85 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 4568899999 689999999999987 589999999999988877654 357889999998 777766543
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 86 ~g~iDilvnnAG~ 98 (255)
T d1fmca_ 86 LGKVDILVNNAGG 98 (255)
T ss_dssp HSSCCEEEECCCC
T ss_pred cCCCCEeeeCCcC
Confidence 58999999864
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=96.83 E-value=0.0017 Score=67.48 Aligned_cols=77 Identities=12% Similarity=0.196 Sum_probs=65.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|+++|.| ++.+|+.+++.|+++ +.+|++.+|+.++++++.++++ ++.++++|+++ +++++++++ .
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~--~~~i~~~~~~i~~~~g~ 79 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFGR 79 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCceEEEEecCCC--HHHHHHHHHHHHHHhCC
Confidence 3568999999 688999999999987 5899999999999999888874 46788999998 788876654 5
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
.|++|++..
T Consensus 80 iDiLinnAg 88 (241)
T d2a4ka1 80 LHGVAHFAG 88 (241)
T ss_dssp CCEEEEGGG
T ss_pred ccEeccccc
Confidence 899999874
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=96.79 E-value=0.0017 Score=68.14 Aligned_cols=78 Identities=15% Similarity=0.205 Sum_probs=63.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|++++|+.++++++.+++ .++.++.+|++| .++++++++
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANH 82 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC--HHHHHHHHHHHHHH
Confidence 4578999999 689999999999987 579999999999998877654 346788899998 777665542
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 83 ~~~~idilvnnAG~ 96 (259)
T d2ae2a_ 83 FHGKLNILVNNAGI 96 (259)
T ss_dssp TTTCCCEEEECCCC
T ss_pred hCCCceEEEECCce
Confidence 37999999754
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.79 E-value=0.0019 Score=70.62 Aligned_cols=74 Identities=20% Similarity=0.252 Sum_probs=56.6
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC--------------------HHHHHHHHHH-cCCeeEEEeecCCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL--------------------KEDIDKVTNE-FGRVEATLIDVNNGG 623 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~--------------------~ekAe~La~~-~~~v~~v~lDV~D~~ 623 (1201)
|||+|.| +|++|+.+++.|++. +++|++.|.- .+....+... .++++.+..|+.|
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~-g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d-- 78 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKK-NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD-- 78 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS--
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-cCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCC--
Confidence 7999999 799999999999986 5889988721 1122222221 1468899999998
Q ss_pred chHHHhhccC--CcEEEEcCC
Q psy12817 624 SDNLSGLVRS--ADLVVSLLP 642 (1201)
Q Consensus 624 ~e~L~elI~~--~DVVIs~lP 642 (1201)
.+.+++++++ .|+|+++..
T Consensus 79 ~~~l~~~~~~~~~d~ViHlAa 99 (393)
T d1i24a_ 79 FEFLAESFKSFEPDSVVHFGE 99 (393)
T ss_dssp HHHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHHhhcchheecccc
Confidence 8899999874 599999984
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=96.78 E-value=0.0015 Score=63.62 Aligned_cols=72 Identities=15% Similarity=0.151 Sum_probs=51.2
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHc-------CCeeEEEeecCCCCchHHHhhccCCc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEF-------GRVEATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~-------~~v~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
+++||.|||+|.||..++..|+..+- -+|.+.|+++++++..+..+ ...... ..| .+ .++++|
T Consensus 4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~---~~d--~~----~~~~ad 74 (146)
T d1ez4a1 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY---SGE--YS----DCKDAD 74 (146)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE---ECC--GG----GGTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEe---ecc--HH----Hhcccc
Confidence 35799999999999999999987653 37999999998877655332 112211 222 32 357999
Q ss_pred EEEEcCCCc
Q psy12817 636 LVVSLLPYN 644 (1201)
Q Consensus 636 VVIs~lP~~ 644 (1201)
+||.+....
T Consensus 75 ivvitag~~ 83 (146)
T d1ez4a1 75 LVVITAGAP 83 (146)
T ss_dssp EEEECCCC-
T ss_pred EEEEecccc
Confidence 999998643
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.78 E-value=0.0013 Score=69.48 Aligned_cols=77 Identities=14% Similarity=0.286 Sum_probs=63.6
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-------CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-------GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-------~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.++++++++++ .++.++.+|++| .++++++++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~-Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~ 79 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINST 79 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC--HHHHHHHHHHH
Confidence 4568899999 689999999999997 579999999999988877654 136789999998 777776664
Q ss_pred -----CCcEEEEcCC
Q psy12817 633 -----SADLVVSLLP 642 (1201)
Q Consensus 633 -----~~DVVIs~lP 642 (1201)
..|++||+..
T Consensus 80 ~~~~g~iDilvnnAG 94 (272)
T d1xkqa_ 80 LKQFGKIDVLVNNAG 94 (272)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCceEEEeCCc
Confidence 5799999974
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.0021 Score=63.79 Aligned_cols=81 Identities=15% Similarity=0.255 Sum_probs=62.3
Q ss_pred CeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchh
Q psy12817 195 PLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLF 274 (1201)
Q Consensus 195 P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f 274 (1201)
-.+|+|+|.|.+|+|..+.++.+| ++|.||++.+ ..-++....+ |.. .-
T Consensus 24 Gk~v~V~GyG~iG~g~A~~~rg~G----------------~~V~v~e~dp--~~al~A~~dG-~~v------------~~ 72 (163)
T d1li4a1 24 GKVAVVAGYGDVGKGCAQALRGFG----------------ARVIITEIDP--INALQAAMEG-YEV------------TT 72 (163)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT----------------CEEEEECSCH--HHHHHHHHTT-CEE------------CC
T ss_pred CCEEEEeccccccHHHHHHHHhCC----------------CeeEeeeccc--chhHHhhcCc-eEe------------ee
Confidence 368999999999999999999999 5677877654 3445554444 222 11
Q ss_pred hhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 275 ASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 275 ~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
.++.++.+|++|++ ...+..|+.|+++. ||+|
T Consensus 73 ~~~a~~~adivvta----TGn~~vI~~eh~~~-MKdg 104 (163)
T d1li4a1 73 MDEACQEGNIFVTT----TGCIDIILGRHFEQ-MKDD 104 (163)
T ss_dssp HHHHTTTCSEEEEC----SSCSCSBCHHHHTT-CCTT
T ss_pred hhhhhhhccEEEec----CCCccchhHHHHHh-ccCC
Confidence 23578899999998 45777999999999 9999
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=96.75 E-value=0.0024 Score=67.60 Aligned_cols=78 Identities=13% Similarity=0.187 Sum_probs=62.3
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLV----- 631 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI----- 631 (1201)
.+.|.++|.| +|.+|+.+++.|++. +.+|++++|+.++++++++++ ..+..+.+|++| .+.+++++
T Consensus 23 l~gK~alITGas~GIG~aiA~~la~~-Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~--~~~v~~~~~~~~~ 99 (294)
T d1w6ua_ 23 FQGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD--PDMVQNTVSELIK 99 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccC--hHHHHHHhhhhhh
Confidence 4568999999 799999999999987 589999999998876655433 346788899998 77776554
Q ss_pred --cCCcEEEEcCCC
Q psy12817 632 --RSADLVVSLLPY 643 (1201)
Q Consensus 632 --~~~DVVIs~lP~ 643 (1201)
...|++||+...
T Consensus 100 ~~g~iDilvnnAg~ 113 (294)
T d1w6ua_ 100 VAGHPNIVINNAAG 113 (294)
T ss_dssp HTCSCSEEEECCCC
T ss_pred hccccchhhhhhhh
Confidence 358999999854
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.0021 Score=68.95 Aligned_cols=77 Identities=16% Similarity=0.272 Sum_probs=63.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---------CCeeEEEeecCCCCchHHHhhcc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---------GRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---------~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|++++|+.+++++.++++ .++.++.+|++| .++++++++
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~-Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~ 86 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN--EEEVNNLVK 86 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC--HHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC--HHHHHHHHH
Confidence 5679999999 689999999999997 579999999998887766543 246788999998 777776654
Q ss_pred -------CCcEEEEcCC
Q psy12817 633 -------SADLVVSLLP 642 (1201)
Q Consensus 633 -------~~DVVIs~lP 642 (1201)
..|++||+..
T Consensus 87 ~~~~~~G~iDiLVnnAg 103 (297)
T d1yxma1 87 STLDTFGKINFLVNNGG 103 (297)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHhCCeEEEEeecc
Confidence 5899999975
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=96.74 E-value=0.001 Score=69.87 Aligned_cols=78 Identities=13% Similarity=0.150 Sum_probs=62.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH----c-CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE----F-GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~----~-~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|++++|+.+++++++++ + .++..+.+|++| +++++++++
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~ 83 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDA 83 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHH
Confidence 5678999999 689999999999997 57999999998776655443 2 357889999998 777776663
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 84 ~~g~iDilVnnAg~ 97 (260)
T d1h5qa_ 84 DLGPISGLIANAGV 97 (260)
T ss_dssp HSCSEEEEEECCCC
T ss_pred HhCCCcEecccccc
Confidence 58999999753
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.73 E-value=0.002 Score=67.72 Aligned_cols=78 Identities=13% Similarity=0.189 Sum_probs=63.5
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.++++++++++ .++..+.+|++| .++++++++
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 82 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSM 82 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC--HHHHHHHHHHHHHH
Confidence 4578999999 689999999999987 579999999999988877654 357888999998 666665542
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 83 ~~g~idilvnnAG~ 96 (259)
T d1xq1a_ 83 FGGKLDILINNLGA 96 (259)
T ss_dssp HTTCCSEEEEECCC
T ss_pred hCCCcccccccccc
Confidence 37999999864
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.72 E-value=0.0025 Score=66.65 Aligned_cols=75 Identities=15% Similarity=0.222 Sum_probs=61.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
|-++|-| ++.+|+.+++.|++. +.+|.+++|+.++++++++++ .++.++++|++| +++++++++ .
T Consensus 3 KValITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g~ 79 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVERYGP 79 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHTCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 4557778 689999999999987 589999999999988877654 357889999998 778776654 4
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|++||+...
T Consensus 80 iDilVnnAG~ 89 (257)
T d2rhca1 80 VDVLVNNAGR 89 (257)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEecccc
Confidence 7999999753
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.69 E-value=0.0016 Score=65.81 Aligned_cols=76 Identities=21% Similarity=0.315 Sum_probs=53.3
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC---------C-eeE------------EEeecCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG---------R-VEA------------TLIDVNNG 622 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~---------~-v~~------------v~lDV~D~ 622 (1201)
.+||.|||+|.||+.+|..+++. +++|++.|++++.+++..+... + ... ..+..
T Consensus 4 IkkvaViGaG~mG~~iA~~~a~~-G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~--- 79 (192)
T d1f0ya2 4 VKHVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT--- 79 (192)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE---
T ss_pred eEEEEEECcCHHHHHHHHHHHhC-CCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccc---
Confidence 48999999999999999998886 6899999999986554332110 0 000 00111
Q ss_pred CchHHHhhccCCcEEEEcCCCcc
Q psy12817 623 GSDNLSGLVRSADLVVSLLPYNL 645 (1201)
Q Consensus 623 ~~e~L~elI~~~DVVIs~lP~~~ 645 (1201)
..++.+.++++|+||.|+|-.+
T Consensus 80 -~~d~~~a~~~ad~ViEav~E~l 101 (192)
T d1f0ya2 80 -STDAASVVHSTDLVVEAIVENL 101 (192)
T ss_dssp -ESCHHHHTTSCSEEEECCCSCH
T ss_pred -cchhHhhhcccceehhhcccch
Confidence 2246677889999999998654
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.67 E-value=0.0002 Score=72.17 Aligned_cols=97 Identities=16% Similarity=0.200 Sum_probs=61.4
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.++.||+|+| +|++|+-+++.|.+++.++++.+..+...-+.+...++.... .+... .........+++|+|+.|+
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~Dvvf~al 79 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLIT--QDLPN-LVAVKDADFSNVDAVFCCL 79 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTT--SCCCC-CBCGGGCCGGGCSEEEECC
T ss_pred CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccc--ccccc-chhhhhhhhcccceeeecc
Confidence 5678999999 799999999999999999976554333333334333322110 01100 0222344557899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEc
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~ 663 (1201)
|.....+++....+.+ ..+|.
T Consensus 80 p~~~s~~~~~~l~~~~-~~v~~ 100 (183)
T d2cvoa1 80 PHGTTQEIIKGLPQEL-KIVDL 100 (183)
T ss_dssp SSSHHHHHHHTSCSSC-EEEEC
T ss_pred ccchHHHHHHHHHhcC-ccccc
Confidence 9877777776544444 44554
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.00038 Score=74.40 Aligned_cols=72 Identities=21% Similarity=0.260 Sum_probs=48.2
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+|||+|.| +|++|+.++++|.+. +.+|+++|+... +.+.+.... ....+|+.+ .+.++.++.++|+||+|.-
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~---~~~~~d~~~--~~~~~~~~~~~d~VihlAa 74 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMD-GHEVTVVDNFFTGRKRNVEHWI---GHENFELIN--HDVVEPLYIEVDQIYHLAS 74 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGTGGGT---TCTTEEEEE--CCTTSCCCCCCSEEEECCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCCcCCHHHHHHhc---CCCceEEEe--hHHHHHHHcCCCEEEECcc
Confidence 58999999 799999999999886 688988886321 222221111 112234443 3455666778999999974
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.66 E-value=0.0021 Score=68.01 Aligned_cols=76 Identities=12% Similarity=0.338 Sum_probs=62.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-------CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-------GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-------~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
+.|.++|.| ++.+|+.+++.|++. +.+|++.+|+.++++++++++ .++.++.+|++| +++++++++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~ 79 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTTL 79 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC--HHHHHHHHHHHH
Confidence 568899999 689999999999987 579999999999988877654 146789999998 777776654
Q ss_pred ----CCcEEEEcCC
Q psy12817 633 ----SADLVVSLLP 642 (1201)
Q Consensus 633 ----~~DVVIs~lP 642 (1201)
..|++||+..
T Consensus 80 ~~~G~iDilVnnAG 93 (274)
T d1xhla_ 80 AKFGKIDILVNNAG 93 (274)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCceEEEeecc
Confidence 4799999974
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=96.66 E-value=0.0028 Score=66.55 Aligned_cols=76 Identities=18% Similarity=0.225 Sum_probs=61.7
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
+.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.++++++.+.. + ++.++.+|++| +++++++++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~ 79 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE 79 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC--HHHHHHHHHHHHH
Confidence 468899999 689999999999997 589999999999887765433 2 46678899998 788776653
Q ss_pred ---CCcEEEEcCC
Q psy12817 633 ---SADLVVSLLP 642 (1201)
Q Consensus 633 ---~~DVVIs~lP 642 (1201)
..|++||+..
T Consensus 80 ~~G~iDiLVnnAG 92 (258)
T d1iy8a_ 80 RFGRIDGFFNNAG 92 (258)
T ss_dssp HHSCCSEEEECCC
T ss_pred HhCCCCEEEECCc
Confidence 5899999875
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=96.65 E-value=0.00019 Score=79.14 Aligned_cols=110 Identities=14% Similarity=0.130 Sum_probs=79.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHcC---CeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD-ENIHITLGSLLKEDIDKVTNEFG---RVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~-~~~~VtVadR~~ekAe~La~~~~---~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++++|||+|..++..++.+... +--+|.|.+|++++++++++++. +++.. +. ++++++++++|+|+.|
T Consensus 128 a~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~---~~----~s~~eav~~ADIi~t~ 200 (340)
T d1x7da_ 128 ARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIR---RA----SSVAEAVKGVDIITTV 200 (340)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEE---EC----SSHHHHHTTCSEEEEC
T ss_pred CceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCce---ec----CCHHHHHhcCCceeec
Confidence 47999999999999999988653 43469999999999999987653 34432 22 3588899999999999
Q ss_pred CCCccc-HHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcC
Q psy12817 641 LPYNLH-HHVAEFCIQHGKNLVTASYLSPEMMALHERAASAG 681 (1201)
Q Consensus 641 lP~~~h-~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAG 681 (1201)
++..-. +-+-...++.|+|+.-+....+.+++++...-+..
T Consensus 201 Tas~s~~Pv~~~~~l~pG~hI~aiGs~~p~~~Eld~~~l~~a 242 (340)
T d1x7da_ 201 TADKAYATIITPDMLEPGMHLNAVGGDCPGKTELHADVLRNA 242 (340)
T ss_dssp CCCSSEEEEECGGGCCTTCEEEECSCCBTTBEEECHHHHHTS
T ss_pred cccCCCCcccchhhcCCCCEEeecccchhhhhccCHHHHhcC
Confidence 853221 22223567899999888765566666655544443
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=96.64 E-value=0.0047 Score=67.16 Aligned_cols=76 Identities=26% Similarity=0.419 Sum_probs=56.8
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC------------CHHHHHHHHHHc---------CCeeEEEeecCCCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL------------LKEDIDKVTNEF---------GRVEATLIDVNNGG 623 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR------------~~ekAe~La~~~---------~~v~~v~lDV~D~~ 623 (1201)
|||+|.| +|++|+.+++.|+++.+++|++.|+ ..++........ .++..+..|+.|
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d-- 80 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN-- 80 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC--
Confidence 5999999 7999999999999877889999874 122222221111 246778899998
Q ss_pred chHHHhhcc---CCcEEEEcCCC
Q psy12817 624 SDNLSGLVR---SADLVVSLLPY 643 (1201)
Q Consensus 624 ~e~L~elI~---~~DVVIs~lP~ 643 (1201)
.+.++++++ .+|+|+.+...
T Consensus 81 ~~~l~~~~~~~~~~d~ViH~Aa~ 103 (383)
T d1gy8a_ 81 EDFLNGVFTRHGPIDAVVHMCAF 103 (383)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCC
T ss_pred HHHhhhhhhccceeehhhccccc
Confidence 888888875 57999999854
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.64 E-value=0.0066 Score=64.82 Aligned_cols=77 Identities=18% Similarity=0.289 Sum_probs=58.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeC----CHHHHHHHHH-----HcCCeeEEEeecCCCCchHHHhhcc
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSL----LKEDIDKVTN-----EFGRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR----~~ekAe~La~-----~~~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
.++|+|||.| +|++|+.++++|.+. +++|+++|| +....+.+.. ..++++.+..|..| .........
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d--~~~~~~~~~ 90 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKL-DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN--LDDCNNACA 90 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTS--HHHHHHHHT
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccc--ccccccccc
Confidence 4568999999 799999999999987 578988876 2223322221 23568889999988 777788888
Q ss_pred CCcEEEEcCC
Q psy12817 633 SADLVVSLLP 642 (1201)
Q Consensus 633 ~~DVVIs~lP 642 (1201)
..+.|+.+.-
T Consensus 91 ~~~~v~~~~a 100 (341)
T d1sb8a_ 91 GVDYVLHQAA 100 (341)
T ss_dssp TCSEEEECCS
T ss_pred cccccccccc
Confidence 8999988863
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=96.64 E-value=0.0021 Score=68.02 Aligned_cols=76 Identities=16% Similarity=0.254 Sum_probs=64.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
+.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.++++++.++++ ++..+.+|+++ .+.++++++ ..
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i 80 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAE-GAKVAVLDKSAERLAELETDHGDNVLGIVGDVRS--LEDQKQAASRCVARFGKI 80 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCCeeEEeccccc--HHHHHHHHHHHHHHhCCc
Confidence 468899999 689999999999997 5899999999999998887763 47888999998 777766653 57
Q ss_pred cEEEEcCC
Q psy12817 635 DLVVSLLP 642 (1201)
Q Consensus 635 DVVIs~lP 642 (1201)
|++||+..
T Consensus 81 dilvnnAG 88 (276)
T d1bdba_ 81 DTLIPNAG 88 (276)
T ss_dssp CEEECCCC
T ss_pred cccccccc
Confidence 99999874
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.63 E-value=0.002 Score=67.72 Aligned_cols=77 Identities=13% Similarity=0.267 Sum_probs=62.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-------CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-------GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-------~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
+.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.++++++++++ .++.++.+|++| .+.++++++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~ 80 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL 80 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC--HHHHHHHHHHHH
Confidence 567788889 689999999999997 479999999999988877653 147789999998 777776664
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 81 ~~~g~iDilvnnAG~ 95 (264)
T d1spxa_ 81 GKFGKLDILVNNAGA 95 (264)
T ss_dssp HHHSCCCEEEECCC-
T ss_pred HHhCCCCEeeccccc
Confidence 58999999753
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=96.63 E-value=0.0019 Score=67.63 Aligned_cols=78 Identities=14% Similarity=0.218 Sum_probs=64.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.+++++++++++ ++..+.+|++| .++++++++ .
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~ 80 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSS--EADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTC--HHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 4568888889 689999999999987 5789999999999999988874 46778899998 777766654 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|++||+...
T Consensus 81 iDilVnnAG~ 90 (253)
T d1hxha_ 81 LNVLVNNAGI 90 (253)
T ss_dssp CCEEEECCCC
T ss_pred CCeEEecccc
Confidence 7999999854
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.62 E-value=0.0016 Score=68.69 Aligned_cols=77 Identities=13% Similarity=0.105 Sum_probs=62.5
Q ss_pred CCeEEEE-c-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc------
Q psy12817 565 SRNVLLL-G-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR------ 632 (1201)
Q Consensus 565 mkKVLIL-G-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~------ 632 (1201)
.|+|+|| | ++.+|+.+++.|++.++.+|++++|+.++++++++++ +++.++.+|++| .++++++++
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~--~~sv~~~~~~~~~~~ 79 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD--LQSIRALRDFLRKEY 79 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC--HHHHHHHHHHHHHhc
Confidence 4788666 6 7899999999999876789999999999988777654 468899999998 777765542
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
..|++||....
T Consensus 80 g~iDiLVnNAGi 91 (275)
T d1wmaa1 80 GGLDVLVNNAGI 91 (275)
T ss_dssp SSEEEEEECCCC
T ss_pred CCcEEEEEcCCc
Confidence 58999998753
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.62 E-value=0.0013 Score=68.28 Aligned_cols=77 Identities=19% Similarity=0.222 Sum_probs=62.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc---------
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR--------- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~--------- 632 (1201)
+|.|+|-| ++.+|+.+++.|++.+. +.|.+.+|+.++++++.+..+ ++.++.+|++| .++++++++
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC--DKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC--HHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC--HHHHHHHHHHHHHHhCCC
Confidence 47888889 68999999999998864 578889999999998877553 58889999998 777665542
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|++|++...
T Consensus 81 ~idilinnAG~ 91 (250)
T d1yo6a1 81 GLSLLINNAGV 91 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CeEEEEEcCcc
Confidence 27999999753
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.60 E-value=0.0017 Score=63.50 Aligned_cols=75 Identities=12% Similarity=0.171 Sum_probs=52.8
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC------CeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG------RVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~------~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
.+++||.|||+|.||..++..|+..+-.++.+.|.++++++..+..+. +..... .. ....++.++++|+
T Consensus 5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~-~~----~~~~~~~~~~adi 79 (154)
T d1pzga1 5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSV-RA----EYSYEAALTGADC 79 (154)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCE-EE----ECSHHHHHTTCSE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEE-ec----cCchhhhhcCCCe
Confidence 457899999999999999988877654589999999887766654331 111111 11 1235667789999
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
||.+..
T Consensus 80 Vvitag 85 (154)
T d1pzga1 80 VIVTAG 85 (154)
T ss_dssp EEECCS
T ss_pred EEEecc
Confidence 999884
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.58 E-value=0.003 Score=65.94 Aligned_cols=76 Identities=18% Similarity=0.166 Sum_probs=62.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc-----
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR----- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~----- 632 (1201)
.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.++++++++.. + ++.++.+|++| .++++++++
T Consensus 3 GKvalITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 79 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVDH 79 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC--HHHHHHHHHHHHHH
Confidence 47888889 689999999999987 579999999999887776543 2 46778899998 777776653
Q ss_pred --CCcEEEEcCCC
Q psy12817 633 --SADLVVSLLPY 643 (1201)
Q Consensus 633 --~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 80 ~G~iDilVnnAg~ 92 (254)
T d2gdza1 80 FGRLDILVNNAGV 92 (254)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCcCeecccccc
Confidence 58999999854
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=96.53 E-value=0.0036 Score=62.02 Aligned_cols=81 Identities=16% Similarity=0.280 Sum_probs=62.7
Q ss_pred CeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchh
Q psy12817 195 PLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLF 274 (1201)
Q Consensus 195 P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f 274 (1201)
-.+|+|.|-|-||+|..+-|+.|| ++|.|+++.+ ...+|....| |.-. -
T Consensus 23 Gk~vvV~GYG~vGrG~A~~~rg~G----------------a~V~V~E~DP--i~alqA~mdG-f~v~------------~ 71 (163)
T d1v8ba1 23 GKIVVICGYGDVGKGCASSMKGLG----------------ARVYITEIDP--ICAIQAVMEG-FNVV------------T 71 (163)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHT----------------CEEEEECSCH--HHHHHHHTTT-CEEC------------C
T ss_pred CCEEEEecccccchhHHHHHHhCC----------------CEEEEEecCc--hhhHHHHhcC-CccC------------c
Confidence 478999999999999999999999 6677776654 4456665544 3321 1
Q ss_pred hhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 275 ASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 275 ~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
.++.++.+|++|++. ..+..|+.+++++ ||.|
T Consensus 72 ~~~a~~~aDi~vTaT----Gn~~vI~~~h~~~-MKdg 103 (163)
T d1v8ba1 72 LDEIVDKGDFFITCT----GNVDVIKLEHLLK-MKNN 103 (163)
T ss_dssp HHHHTTTCSEEEECC----SSSSSBCHHHHTT-CCTT
T ss_pred hhHccccCcEEEEcC----CCCccccHHHHHH-hhCC
Confidence 246799999999985 4455999999999 9999
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.52 E-value=0.0049 Score=56.63 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=62.1
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
+.+.++|+|+|.|.+|..-++.|.+. +.+|+|++.... ..+.++.. ++++...-... .+.+.++++|+.+
T Consensus 9 ~l~~k~vlVvG~G~va~~ka~~ll~~-ga~v~v~~~~~~~~~~~~~~~-~~i~~~~~~~~-------~~dl~~~~lv~~a 79 (113)
T d1pjqa1 9 QLRDRDCLIVGGGDVAERKARLLLEA-GARLTVNALTFIPQFTVWANE-GMLTLVEGPFD-------ETLLDSCWLAIAA 79 (113)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT-TBEEEEEESSCCHHHHHHHTT-TSCEEEESSCC-------GGGGTTCSEEEEC
T ss_pred EeCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCChHHHHHHhc-CCceeeccCCC-------HHHhCCCcEEeec
Confidence 35679999999999999999999987 578888877654 33444433 35555443322 2345689999999
Q ss_pred CCCc-ccHHHHHHHHHcCCeE
Q psy12817 641 LPYN-LHHHVAEFCIQHGKNL 660 (1201)
Q Consensus 641 lP~~-~h~~VakacIeaGkh~ 660 (1201)
+... .+..+.+.|-+.|+.+
T Consensus 80 t~d~~~n~~i~~~a~~~~ilV 100 (113)
T d1pjqa1 80 TDDDTVNQRVSDAAESRRIFC 100 (113)
T ss_dssp CSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHHHHcCCEE
Confidence 8643 4566777777766643
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.44 E-value=0.0048 Score=63.62 Aligned_cols=73 Identities=18% Similarity=0.235 Sum_probs=59.9
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.|+++|.| ++.+|+.+++.|++. +.+|.+.+|+.+.+++. +.+.+.+|+++ +.+.+.+.+.+.|++||+.
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~-Ga~V~~~~r~~~~l~~~-----~~~~~~~Dv~~-~~~~~~~~~g~iD~lVnnA 74 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQE-GAEVTICARNEELLKRS-----GHRYVVCDLRK-DLDLLFEKVKEVDILVLNA 74 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHT-----CSEEEECCTTT-CHHHHHHHSCCCSEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHhc-----CCcEEEcchHH-HHHHHHHHhCCCcEEEecc
Confidence 4678999999 689999999999987 57999999998877653 34667889987 5566667777899999997
Q ss_pred C
Q psy12817 642 P 642 (1201)
Q Consensus 642 P 642 (1201)
.
T Consensus 75 G 75 (234)
T d1o5ia_ 75 G 75 (234)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=96.43 E-value=0.0088 Score=58.51 Aligned_cols=117 Identities=11% Similarity=0.149 Sum_probs=80.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCC-CeEE--EEeCCHHHHHHHHHHcCCeeEEEee---------------------c
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDEN-IHIT--LGSLLKEDIDKVTNEFGRVEATLID---------------------V 619 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~-~~Vt--VadR~~ekAe~La~~~~~v~~v~lD---------------------V 619 (1201)
||||.|+| +|.||....+.+.++++ ++|. .+.++.+.+.+.+.+| +.+.+.+. .
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f-~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~ 79 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF-SPRYAVMDDEASAKLLKTMLQQQGSRTEVL 79 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH-CCSEEEESSHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH-hhcccccccHHHHHHHHHHhhhhccccccc
Confidence 78999999 79999999999988753 5543 5788888888888877 22222221 0
Q ss_pred CCCCchHHHhhcc--CCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEe
Q psy12817 620 NNGGSDNLSGLVR--SADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 620 ~D~~~e~L~elI~--~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~ 686 (1201)
.. .+.+.+++. ++|+||+++.......-.-.|+++|+.+.-+. .+..- .+...+++.|..++|
T Consensus 80 ~g--~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLANKEslV~aG--~i~~~~~k~~~~IiP 147 (151)
T d1q0qa2 80 SG--QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKDMRTPIA--HTMAWPNRVNSGVKP 147 (151)
T ss_dssp ES--HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEECCHCTHHHHH--HHHHTTSCCCCSCCC
T ss_pred cC--hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEEccHHHHhHH--HHHHHHHHhCCcEEc
Confidence 01 234544443 68999999998888888889999999877653 22222 233445666666554
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.42 E-value=0.0019 Score=61.91 Aligned_cols=43 Identities=28% Similarity=0.350 Sum_probs=38.8
Q ss_pred CeEEEE-cCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc
Q psy12817 566 RNVLLL-GAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF 609 (1201)
Q Consensus 566 kKVLIL-GAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~ 609 (1201)
|||+|+ |+|.+|+.+++.|++. +++|++.+|++++++.++++.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~-G~~V~l~~R~~e~~~~l~~~i 44 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATL-GHEIVVGSRREEKAEAKAAEY 44 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSHHHHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHH
Confidence 689999 6999999999999986 689999999999999888765
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=96.39 E-value=0.0062 Score=59.09 Aligned_cols=99 Identities=9% Similarity=0.090 Sum_probs=63.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-----cCCcEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-----RSADLVV 638 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-----~~~DVVI 638 (1201)
...+|+|+|+|.+|..++..+... +.+|++++++.++.+... ++..-..+..|-.+.+.....+.+ .++|+||
T Consensus 26 ~g~~vlV~G~G~vG~~~~~~ak~~-Ga~vi~v~~~~~r~~~a~-~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi 103 (170)
T d1e3ja2 26 LGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAK-NCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTI 103 (170)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHH-HTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCEEEEEcccccchhhHhhHhhh-cccccccchHHHHHHHHH-HcCCcEEEeccccccccchhhhhhhcccccCCceee
Confidence 456899999999999999877665 579999999999987544 442222222332220122333333 2589999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
+|++.....+.+-.+++.+-.++...
T Consensus 104 d~~g~~~~~~~a~~~~~~~G~iv~~G 129 (170)
T d1e3ja2 104 DCSGNEKCITIGINITRTGGTLMLVG 129 (170)
T ss_dssp ECSCCHHHHHHHHHHSCTTCEEEECS
T ss_pred ecCCChHHHHHHHHHHhcCCceEEEe
Confidence 99976544444445556666666653
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=96.39 E-value=0.0026 Score=68.38 Aligned_cols=74 Identities=18% Similarity=0.298 Sum_probs=59.5
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CC-eeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GR-VEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~-v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
.|+|+|.| +|++|+.+++.|.++ +++|....|+.++...+.... .. ...+..|+.| .+.+.+++.++|.|
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~-G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~v 87 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK--QGAYDEVIKGAAGV 87 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS--TTTTTTTTTTCSEE
T ss_pred cCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccc--hhhhhhhcccchhh
Confidence 58999999 799999999999987 589988899988776654322 11 2335568887 78899999999999
Q ss_pred EEcC
Q psy12817 638 VSLL 641 (1201)
Q Consensus 638 Is~l 641 (1201)
+.+.
T Consensus 88 ~~~a 91 (342)
T d1y1pa1 88 AHIA 91 (342)
T ss_dssp EECC
T ss_pred hhhc
Confidence 9987
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.39 E-value=0.0039 Score=62.57 Aligned_cols=87 Identities=14% Similarity=0.073 Sum_probs=64.5
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.++.|+|.|+.|+...+.++.+| .++.+|+......+... .+-.+ .
T Consensus 41 ~l~~k~vgiiG~G~IG~~va~~~~~fg----------------~~v~~~d~~~~~~~~~~--~~~~~------------~ 90 (184)
T d1ygya1 41 EIFGKTVGVVGLGRIGQLVAQRIAAFG----------------AYVVAYDPYVSPARAAQ--LGIEL------------L 90 (184)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTT----------------CEEEEECTTSCHHHHHH--HTCEE------------C
T ss_pred cccceeeeeccccchhHHHHHHhhhcc----------------ceEEeecCCCChhHHhh--cCcee------------c
Confidence 466789999999999999999999998 34556654433322211 11111 1
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
.+ +++++.+|+|+.+.--.+.+-.||..+.++. ||||
T Consensus 91 -~l-~ell~~sDiv~~~~Plt~~T~~lin~~~l~~-mk~~ 127 (184)
T d1ygya1 91 -SL-DDLLARADFISVHLPKTPETAGLIDKEALAK-TKPG 127 (184)
T ss_dssp -CH-HHHHHHCSEEEECCCCSTTTTTCBCHHHHTT-SCTT
T ss_pred -cH-HHHHhhCCEEEEcCCCCchhhhhhhHHHHhh-hCCC
Confidence 12 3567789999999988888999999999999 9999
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=96.39 E-value=0.0037 Score=65.75 Aligned_cols=79 Identities=16% Similarity=0.250 Sum_probs=61.4
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc---
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-EDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR--- 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~--- 632 (1201)
+.+.|.++|.| ++.+|+.+++.|++. +.+|.+.+|+. +.++++++.. .++.++.+|++| +++++++++
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~ 80 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV--ESDVINLVQSAI 80 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHH
Confidence 35678899999 689999999999987 57999999975 4555555433 357788999998 777776664
Q ss_pred ----CCcEEEEcCCC
Q psy12817 633 ----SADLVVSLLPY 643 (1201)
Q Consensus 633 ----~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 81 ~~~G~iDiLVnnAG~ 95 (261)
T d1geea_ 81 KEFGKLDVMINNAGL 95 (261)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCCCEeecccee
Confidence 57999999753
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.32 E-value=0.0012 Score=67.33 Aligned_cols=68 Identities=13% Similarity=0.195 Sum_probs=51.8
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
....++|+|+|+|.||+.+++.|... +.+|.++|+....... . .... .+.++++++++|+|+.++
T Consensus 40 el~gk~vgIiG~G~IG~~va~~l~~f-g~~V~~~d~~~~~~~~-~---~~~~----------~~~l~~~l~~sDii~~~~ 104 (197)
T d1j4aa1 40 EVRDQVVGVVGTGHIGQVFMQIMEGF-GAKVITYDIFRNPELE-K---KGYY----------VDSLDDLYKQADVISLHV 104 (197)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCHHHH-H---TTCB----------CSCHHHHHHHCSEEEECS
T ss_pred cccCCeEEEecccccchhHHHhHhhh-cccccccCcccccccc-c---ceee----------eccccccccccccccccC
Confidence 34579999999999999999999765 5789999977543221 1 1111 346888999999999999
Q ss_pred CCc
Q psy12817 642 PYN 644 (1201)
Q Consensus 642 P~~ 644 (1201)
|..
T Consensus 105 plt 107 (197)
T d1j4aa1 105 PDV 107 (197)
T ss_dssp CCC
T ss_pred Ccc
Confidence 964
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.31 E-value=0.0051 Score=61.63 Aligned_cols=95 Identities=8% Similarity=0.122 Sum_probs=70.4
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|.|+|.|++|+...+.++.+| .++.+|+.... .+. ..+.
T Consensus 39 ~l~gk~vgIiG~G~IG~~va~~l~~~g----------------~~v~~~d~~~~--------~~~-----------~~~~ 83 (181)
T d1qp8a1 39 LIQGEKVAVLGLGEIGTRVGKILAALG----------------AQVRGFSRTPK--------EGP-----------WRFT 83 (181)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTT----------------CEEEEECSSCC--------CSS-----------SCCB
T ss_pred cccCceEEEeccccccccceeeeeccc----------------ccccccccccc--------ccc-----------eeee
Confidence 366689999999999999999999999 44566653210 110 1111
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCe
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSI 343 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsi 343 (1201)
+.+ +++++.+|+|+.++--.+.+-.+|+.+.++. ||+| ++++.+| .|+-+
T Consensus 84 ~~l-~ell~~sDiv~~~~pl~~~t~~li~~~~l~~-mk~~------------------ailIN~~--RG~iv 133 (181)
T d1qp8a1 84 NSL-EEALREARAAVCALPLNKHTRGLVKYQHLAL-MAED------------------AVFVNVG--RAEVL 133 (181)
T ss_dssp SCS-HHHHTTCSEEEECCCCSTTTTTCBCHHHHTT-SCTT------------------CEEEECS--CGGGB
T ss_pred ech-hhhhhccchhhcccccccccccccccceeee-cccc------------------ceEEecc--ccccc
Confidence 122 3578899999998877778889999999999 9999 8899887 44433
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.29 E-value=0.00037 Score=76.02 Aligned_cols=112 Identities=15% Similarity=0.129 Sum_probs=78.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHcC--CeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHR-DENIHITLGSLLKEDIDKVTNEFG--RVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~-~~~~~VtVadR~~ekAe~La~~~~--~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.++++|||+|..++..++.|.. .+--+|.|.+|+.+++++++.... ++... +. ..+.+.++|+|+.|+
T Consensus 125 ~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~---~~------~~~a~~~aDiV~taT 195 (320)
T d1omoa_ 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS---VQ------PAEEASRCDVLVTTT 195 (320)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE---EC------CHHHHTSSSEEEECC
T ss_pred ccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccc---cc------hhhhhccccEEEEec
Confidence 4789999999999999999876 444469999999999999887652 22221 11 234467899999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEe
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~ 686 (1201)
|..- +-+-...++.|.|+..+....+.+++++.+.-+..-.++.
T Consensus 196 ~s~~-P~~~~~~l~~G~hv~~iGs~~p~~~Eld~~~~~~a~~~vd 239 (320)
T d1omoa_ 196 PSRK-PVVKAEWVEEGTHINAIGADGPGKQELDVEILKKAKIVVD 239 (320)
T ss_dssp CCSS-CCBCGGGCCTTCEEEECSCCSTTCCCBCHHHHHTEEEEES
T ss_pred cCcc-cccchhhcCCCCeEeecCCccccccccCHHHhhcCceEec
Confidence 7421 1122346789999999976666677776655555444443
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=96.29 E-value=0.0043 Score=64.85 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=59.9
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHH----c-CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNE----F-GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~----~-~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
+.|.++|.| ++.+|+.+++.|++. +.+|++.+|+ .++++++.+. . .++.++.+|++| .++++++++
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~ 79 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK--GEAVRGLVDNAVR 79 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS--HHHHHHHHHHHHH
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence 457788889 689999999999987 5799999986 5566655433 2 257788899998 788877764
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 80 ~~G~iDiLVnnAG~ 93 (260)
T d1x1ta1 80 QMGRIDILVNNAGI 93 (260)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HhCCCcEEEeeccc
Confidence 48999999854
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=96.24 E-value=0.0064 Score=63.40 Aligned_cols=75 Identities=19% Similarity=0.277 Sum_probs=60.8
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CCc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SAD 635 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~D 635 (1201)
+.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.+..+ +++.. +..++++|++| .++++++++ ..|
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~-~~~~~-~~~~~~~Dv~~--~~~v~~~~~~~~~~~G~iD 78 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEGKE-VAEAI-GGAFFQVDLED--ERERVRFVEEAAYALGRVD 78 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTHHH-HHHHH-TCEEEECCTTC--HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHH-HHHHc-CCeEEEEeCCC--HHHHHHHHHHHHHhcCCCC
Confidence 568999999 789999999999997 579999999987644 55555 56788999998 777776654 589
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
++||+...
T Consensus 79 iLVnnAG~ 86 (248)
T d2d1ya1 79 VLVNNAAI 86 (248)
T ss_dssp EEEECCCC
T ss_pred eEEEeCcC
Confidence 99999753
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.22 E-value=0.0027 Score=64.60 Aligned_cols=86 Identities=13% Similarity=0.162 Sum_probs=63.1
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
++.-.+|.|+|.|++|+...+.++.+| .++.+|+....... +. .+- +.
T Consensus 40 el~gk~vgIiG~G~IG~~va~~l~~fg----------------~~V~~~d~~~~~~~--~~-~~~-------------~~ 87 (197)
T d1j4aa1 40 EVRDQVVGVVGTGHIGQVFMQIMEGFG----------------AKVITYDIFRNPEL--EK-KGY-------------YV 87 (197)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTT----------------CEEEEECSSCCHHH--HH-TTC-------------BC
T ss_pred cccCCeEEEecccccchhHHHhHhhhc----------------ccccccCccccccc--cc-cee-------------ee
Confidence 466789999999999999999999999 44566664332211 11 111 11
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
.. ..++++.+|+|+.++-....+-.+|+++.++. ||+|
T Consensus 88 ~~-l~~~l~~sDii~~~~plt~~T~~li~~~~l~~-mk~~ 125 (197)
T d1j4aa1 88 DS-LDDLYKQADVISLHVPDVPANVHMINDESIAK-MKQD 125 (197)
T ss_dssp SC-HHHHHHHCSEEEECSCCCGGGTTCBSHHHHHH-SCTT
T ss_pred cc-ccccccccccccccCCccccccccccHHHHhh-hCCc
Confidence 11 23467789999999988777888999999999 9999
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.18 E-value=0.0042 Score=64.62 Aligned_cols=77 Identities=9% Similarity=0.250 Sum_probs=61.9
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh---ccCCcEEE
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL---VRSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el---I~~~DVVI 638 (1201)
.+.|.++|.| ++.+|+.+++.|+++ +.+|.+++|++++++++.+.. ++....+|+.+ .+..+.. +...|++|
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~-G~~Vi~~~r~~~~l~~~~~~~-~~~~~~~d~~~--~~~~~~~~~~~~~id~lV 79 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEKYP-GIQTRVLDVTK--KKQIDQFANEVERLDVLF 79 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGGGST-TEEEEECCTTC--HHHHHHHHHHCSCCSEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcc-CCceeeeeccc--cccccccccccccceeEE
Confidence 4568899999 799999999999997 579999999999998877654 78888888876 4444433 45789999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
++...
T Consensus 80 n~ag~ 84 (245)
T d2ag5a1 80 NVAGF 84 (245)
T ss_dssp ECCCC
T ss_pred ecccc
Confidence 99754
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=96.18 E-value=0.00078 Score=63.91 Aligned_cols=89 Identities=13% Similarity=0.204 Sum_probs=65.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-CCcEEEEcCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-SADLVVSLLP 642 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-~~DVVIs~lP 642 (1201)
+.||+|+|||.+|+.+++++....+++ +.++|.++++.-+ ...+++.. + .+.+.++++ ..++++.++|
T Consensus 3 ~~~v~I~GaG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~---~I~Gi~V~--~-----~~~l~~~~~~~i~iai~~i~ 72 (126)
T d2dt5a2 3 KWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGR---PVRGGVIE--H-----VDLLPQRVPGRIEIALLTVP 72 (126)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTC---EETTEEEE--E-----GGGHHHHSTTTCCEEEECSC
T ss_pred CceEEEEcCCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCC---EECCEEEe--c-----HHHHHHHHhhcccEEEEeCC
Confidence 469999999999999999887767777 5577888765332 22344432 2 345666654 4789999999
Q ss_pred CcccHHHHHHHHHcCCe-EEEc
Q psy12817 643 YNLHHHVAEFCIQHGKN-LVTA 663 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh-~VD~ 663 (1201)
...+.+++..|++.|+. +.+.
T Consensus 73 ~~~~~~I~d~l~~~gIk~I~~f 94 (126)
T d2dt5a2 73 REAAQKAADLLVAAGIKGILNF 94 (126)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEeec
Confidence 88888999999999976 4443
|
| >d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Homoserine dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.15 E-value=0.001 Score=66.05 Aligned_cols=119 Identities=17% Similarity=0.189 Sum_probs=66.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCC-CCeE---EEEeCCHH----------HHHHHHHHcCCeeEEEeecCCCCchHHH
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDE-NIHI---TLGSLLKE----------DIDKVTNEFGRVEATLIDVNNGGSDNLS 628 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~-~~~V---tVadR~~e----------kAe~La~~~~~v~~v~lDV~D~~~e~L~ 628 (1201)
.++.+|+|+|+|.||+.+++.|.++. .+++ .+++.+.. ........+.... ....+ .+.+.
T Consensus 2 ~k~i~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~--~~~~~ 76 (168)
T d1ebfa1 2 TKVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAAST---TKTLP--LDDLI 76 (168)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCC---CBCCC--HHHHH
T ss_pred CCEEEEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhcc---ccccc--HHHHH
Confidence 46789999999999999999998643 3442 23332110 0000011110000 01111 23344
Q ss_pred hhcc---CCcEEEEcCCCcccHHHHHHHHHcCCeEEEcc--CCh---HHHHHHHHHHHHcCCEEEec
Q psy12817 629 GLVR---SADLVVSLLPYNLHHHVAEFCIQHGKNLVTAS--YLS---PEMMALHERAASAGITVLNE 687 (1201)
Q Consensus 629 elI~---~~DVVIs~lP~~~h~~VakacIeaGkh~VD~S--yvs---~e~~eLde~AkeAGVtil~e 687 (1201)
+.+. ..|++++|+...-.....+.++++|+|+|++. ..+ +..++|.+.+++++. +.-|
T Consensus 77 ~~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G~hVVTANK~~la~~~~~~~~L~~~a~~~~~-~~yE 142 (168)
T d1ebfa1 77 AHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGF-VYHE 142 (168)
T ss_dssp HHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHTCCCTTCCC-EECG
T ss_pred HHhccCCCceEEEEecCChHHHHHHHHHHHcCCeEEecCcccccCCHHHHHHHHHHHHHCCc-EEEe
Confidence 4333 46899999865433455678999999999985 222 344566555666665 4444
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.13 E-value=0.0019 Score=63.00 Aligned_cols=90 Identities=13% Similarity=0.154 Sum_probs=61.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRD--ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~--~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
.||+|+| +|++|+-+++.|.++ +..++...+.+...-+.+....+ .....+.. .....+.|+|+.++|
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~--~~~~~~~~-------~~~~~~~d~~f~~~~ 72 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQ--DITIEETT-------ETAFEGVDIALFSAG 72 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTE--EEEEEECC-------TTTTTTCSEEEECSC
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCC--cccccccc-------hhhhhhhhhhhhccC
Confidence 4899999 699999999999988 45566655533222221111111 11111211 223457999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEcc
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S 664 (1201)
.......+..+.+.|+.++|.|
T Consensus 73 ~~~s~~~~~~~~~~~~~VIDlS 94 (154)
T d2gz1a1 73 SSTSAKYAPYAVKAGVVVVDNT 94 (154)
T ss_dssp HHHHHHHHHHHHHTTCEEEECS
T ss_pred ccchhhHHhhhccccceehhcC
Confidence 8877888899999999999986
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=96.11 E-value=0.0096 Score=61.86 Aligned_cols=78 Identities=15% Similarity=0.290 Sum_probs=60.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc-CCeeEEEeecCCCCchHHHhhcc-------
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF-GRVEATLIDVNNGGSDNLSGLVR------- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~-~~v~~v~lDV~D~~~e~L~elI~------- 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|.+++|+.+ .+++..+.. .++.++.+|++| .++++++++
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~G 79 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFG 79 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC--HHHHHHHHHHHHHHcC
Confidence 4568899999 689999999999987 578999999763 445544544 357789999998 777776653
Q ss_pred CCcEEEEcCCC
Q psy12817 633 SADLVVSLLPY 643 (1201)
Q Consensus 633 ~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 80 ~iDilVnnAG~ 90 (247)
T d2ew8a1 80 RCDILVNNAGI 90 (247)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 58999999753
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=96.08 E-value=0.0028 Score=69.07 Aligned_cols=74 Identities=18% Similarity=0.352 Sum_probs=54.2
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH-----HHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK-----EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLV 637 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~-----ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVV 637 (1201)
|||||.| +|++|+.+++.|++.+...|...|+.. +..+.+. ..++++.+..|+.| .+.+.++++ ++|+|
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d--~~~l~~~~~~~~~d~V 77 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS-ESNRYNFEHADICD--SAEITRIFEQYQPDAV 77 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTC--HHHHHHHHHHHCCSEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhh-hcCCcEEEEccCCC--HHHHHHHHHhCCCCEE
Confidence 5899999 799999999999987543355555421 1122221 12478899999998 888888877 58999
Q ss_pred EEcCC
Q psy12817 638 VSLLP 642 (1201)
Q Consensus 638 Is~lP 642 (1201)
|+|..
T Consensus 78 ihlAa 82 (361)
T d1kewa_ 78 MHLAA 82 (361)
T ss_dssp EECCS
T ss_pred EECcc
Confidence 99974
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.07 E-value=0.0073 Score=58.48 Aligned_cols=75 Identities=21% Similarity=0.169 Sum_probs=51.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCC-----eeEEEeecCCCCchHHHhhccCCcE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGR-----VEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~-----v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
...+||.|||+|.||..++..|+..+-. ++.+.|+++++++..+..+.. ...+.+-..| . +.++++|+
T Consensus 4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d--~----~~l~daDv 77 (148)
T d1ldna1 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD--Y----DDCRDADL 77 (148)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC--G----GGTTTCSE
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC--H----HHhcccee
Confidence 3457999999999999999998876433 699999999887665543310 0111111122 2 45678999
Q ss_pred EEEcCCC
Q psy12817 637 VVSLLPY 643 (1201)
Q Consensus 637 VIs~lP~ 643 (1201)
||.+...
T Consensus 78 vvitag~ 84 (148)
T d1ldna1 78 VVICAGA 84 (148)
T ss_dssp EEECCSC
T ss_pred EEEeccc
Confidence 9998854
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=96.05 E-value=0.0061 Score=63.20 Aligned_cols=76 Identities=17% Similarity=0.262 Sum_probs=58.7
Q ss_pred Ce-EEEEc-CchhHHHHHHHHHhCCCC------eEEEEeCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-
Q psy12817 566 RN-VLLLG-AGYVSRPLIEYLHRDENI------HITLGSLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR- 632 (1201)
Q Consensus 566 kK-VLILG-AG~VG~~va~~La~~~~~------~VtVadR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~- 632 (1201)
|+ |+|-| ++.+|+.+++.|++.+-. .|.+++|+.+++++++++. .++.++.+|++| .++++++++
T Consensus 1 K~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~ 78 (240)
T d2bd0a1 1 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD--MADVRRLTTH 78 (240)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS--HHHHHHHHHH
T ss_pred CCEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHH
Confidence 46 45668 689999999999986421 3889999999998887654 346778899998 777766553
Q ss_pred ------CCcEEEEcCCC
Q psy12817 633 ------SADLVVSLLPY 643 (1201)
Q Consensus 633 ------~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 79 ~~~~~g~iDilvnnAg~ 95 (240)
T d2bd0a1 79 IVERYGHIDCLVNNAGV 95 (240)
T ss_dssp HHHHTSCCSEEEECCCC
T ss_pred HHHHcCCcceeeccccc
Confidence 48999999753
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.02 E-value=0.0072 Score=59.68 Aligned_cols=98 Identities=14% Similarity=0.069 Sum_probs=63.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI~--~~DVVIs~ 640 (1201)
...+|+|+|+|.+|..++..+...+-.+|+++|++.++.+. ++++ ++.. .+|..+.+ .+.+.++.. ++|+||+|
T Consensus 27 ~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~-a~~l-Ga~~-~i~~~~~~~~~~v~~~t~g~G~D~vid~ 103 (174)
T d1jqba2 27 MGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEA-AKFY-GATD-ILNYKNGHIEDQVMKLTNGKGVDRVIMA 103 (174)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHH-HHHH-TCSE-EECGGGSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHH-HHhh-Cccc-cccccchhHHHHHHHHhhccCcceEEEc
Confidence 45689999999999999988876654579999999988665 4455 3332 24544311 223334432 48999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
++.....+.+-.|++.+-.++...
T Consensus 104 ~g~~~~~~~a~~~~~~~G~iv~~G 127 (174)
T d1jqba2 104 GGGSETLSQAVKMVKPGGIISNIN 127 (174)
T ss_dssp SSCTTHHHHHHHHEEEEEEEEECC
T ss_pred cCCHHHHHHHHHHHhcCCEEEEEe
Confidence 976544444445555555555543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=96.01 E-value=0.0023 Score=65.92 Aligned_cols=61 Identities=23% Similarity=0.285 Sum_probs=45.9
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVVIs~lP 642 (1201)
|||||.| +|++|+.+++.|.+.+ +++++++.... ...|+.| .+.+++++++ .|+||+|..
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g--~~v~~~~~~~~-------------~~~Dl~~--~~~~~~~i~~~~~D~Vih~Aa 63 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVG--NLIALDVHSKE-------------FCGDFSN--PKGVAETVRKLRPDVIVNAAA 63 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTS--EEEEECTTCSS-------------SCCCTTC--HHHHHHHHHHHCCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CEEEEECCCcc-------------ccCcCCC--HHHHHHHHHHcCCCEEEEecc
Confidence 6899999 6999999999998764 45555554221 2357887 8888888874 599999975
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 64 ~ 64 (298)
T d1n2sa_ 64 H 64 (298)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.00 E-value=0.0016 Score=63.05 Aligned_cols=73 Identities=15% Similarity=0.174 Sum_probs=47.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCCe----eEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGRV----EATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~v----~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
++||.|||+|.||..++..|...+-. ++.+.|++.++++..+..+.+. ..... ... + .+.++++|+||.
T Consensus 1 r~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~-~~~-~----~~~~~~adivvi 74 (142)
T d1y6ja1 1 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSL-YAG-D----YSDVKDCDVIVV 74 (142)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEE-C---C----GGGGTTCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeE-eeC-c----HHHhCCCceEEE
Confidence 36999999999999999988876544 6999999998766555443221 11111 111 1 235678999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
+...
T Consensus 75 tag~ 78 (142)
T d1y6ja1 75 TAGA 78 (142)
T ss_dssp CCCC
T ss_pred eccc
Confidence 9753
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=95.99 E-value=0.014 Score=58.30 Aligned_cols=89 Identities=4% Similarity=0.061 Sum_probs=63.2
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.++.|+|.|++|+.-.+.++.+| .++..|+....... .....+.. +.
T Consensus 41 ~l~~~~vgiiG~G~IG~~va~~l~~fg----------------~~v~~~d~~~~~~~-~~~~~~~~------------~~ 91 (188)
T d2naca1 41 DLEAMHVGTVAAGRIGLAVLRRLAPFD----------------VHLHYTDRHRLPES-VEKELNLT------------WH 91 (188)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGT----------------CEEEEECSSCCCHH-HHHHHTCE------------EC
T ss_pred eccccceeeccccccchhhhhhhhccC----------------ceEEEEeecccccc-cccccccc------------cc
Confidence 466789999999999999999999988 34555554322221 11111210 11
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
.. ..++++.+|+|+.+.-..+.+-.+|+.+.++. ||+|
T Consensus 92 ~~-l~~~l~~sD~v~~~~plt~~T~~li~~~~l~~-mk~g 129 (188)
T d2naca1 92 AT-REDMYPVCDVVTLNCPLHPETEHMINDETLKL-FKRG 129 (188)
T ss_dssp SS-HHHHGGGCSEEEECSCCCTTTTTCBSHHHHTT-SCTT
T ss_pred CC-HHHHHHhccchhhcccccccchhhhHHHHHHh-CCCC
Confidence 11 12467789999999988889999999999999 9999
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.98 E-value=0.0071 Score=64.28 Aligned_cols=74 Identities=20% Similarity=0.243 Sum_probs=54.2
Q ss_pred CeE-EEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-----HHHHHHH----H-cCCeeEEEeecCCCCchHHHhhcc-
Q psy12817 566 RNV-LLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-----DIDKVTN----E-FGRVEATLIDVNNGGSDNLSGLVR- 632 (1201)
Q Consensus 566 kKV-LILG-AG~VG~~va~~La~~~~~~VtVadR~~e-----kAe~La~----~-~~~v~~v~lDV~D~~~e~L~elI~- 632 (1201)
||| ||.| +|++|+.++++|.+. +++|+.+||... +.+.+.. . ..+++.+..|+.| .+.+.+++.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~-g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~ 77 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEK-GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTD--STCLVKIINE 77 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTC--HHHHHHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC-cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCC--chhhHHHHhh
Confidence 689 8999 799999999999986 689999998542 1111111 1 1367889999998 888888876
Q ss_pred -CCcEEEEcCC
Q psy12817 633 -SADLVVSLLP 642 (1201)
Q Consensus 633 -~~DVVIs~lP 642 (1201)
+.++|+.+..
T Consensus 78 ~~~~~v~~~~a 88 (347)
T d1t2aa_ 78 VKPTEIYNLGA 88 (347)
T ss_dssp HCCSEEEECCS
T ss_pred cccceeeeeee
Confidence 4567877764
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=95.98 E-value=0.02 Score=55.61 Aligned_cols=96 Identities=10% Similarity=0.186 Sum_probs=67.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
....+|+|+|+|.+|..+++.+... +.++++++++.++.+ ++.++ +... .+|..+ .+......++.|+||+|++
T Consensus 29 ~~G~~VlI~GaG~vG~~a~qlak~~-Ga~~i~~~~~~~~~~-~a~~l-Gad~-~i~~~~--~~~~~~~~~~~D~vid~~g 102 (168)
T d1uufa2 29 GPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKRE-AAKAL-GADE-VVNSRN--ADEMAAHLKSFDFILNTVA 102 (168)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHH-HHHHH-TCSE-EEETTC--HHHHHTTTTCEEEEEECCS
T ss_pred CCCCEEEEeccchHHHHHHHHhhcc-cccchhhccchhHHH-HHhcc-CCcE-EEECch--hhHHHHhcCCCceeeeeee
Confidence 3457999999999999999877665 577778898888765 44555 3332 356665 5556666678999999997
Q ss_pred CcccHHHHHHHHHcCCeEEEcc
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~S 664 (1201)
.......+-.+++.+=.++...
T Consensus 103 ~~~~~~~~~~~l~~~G~iv~~G 124 (168)
T d1uufa2 103 APHNLDDFTTLLKRDGTMTLVG 124 (168)
T ss_dssp SCCCHHHHHTTEEEEEEEEECC
T ss_pred cchhHHHHHHHHhcCCEEEEec
Confidence 6555555555566665666654
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.98 E-value=0.0075 Score=58.32 Aligned_cols=73 Identities=19% Similarity=0.187 Sum_probs=50.2
Q ss_pred eEEEEcC-chhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCC-eeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 567 NVLLLGA-GYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGR-VEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 567 KVLILGA-G~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~-v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
||.|+|| |.||+.++..|..++-. ++.+.|.+..+++.+--.+.. ......-+. .....+.++++|+||.+..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~---~~~~~~~~~~aDivVitag 77 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG---PEQLPDCLKGCDVVVIPAG 77 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES---GGGHHHHHTTCSEEEECCS
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEc---CCChHHHhCCCCEEEECCC
Confidence 8999995 99999999988876543 599999987766654333211 111111122 3456677899999999875
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.98 E-value=0.0083 Score=64.01 Aligned_cols=75 Identities=20% Similarity=0.254 Sum_probs=54.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC----------HHHHHHHHH-HcCCeeEEEeecCCCCchHHHhhcc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL----------KEDIDKVTN-EFGRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~----------~ekAe~La~-~~~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
.|||||.| +|++|+.+++.|++. +++|++.|+. .+..+.+.. ..+++..+..|+.| .+.+.+++.
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~-g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~l~~~~~ 78 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEA-GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILD--QGALQRLFK 78 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT-TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTC--HHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccc--ccccccccc
Confidence 47999999 799999999999987 4788888641 223333322 12478999999998 889988887
Q ss_pred CCc--EEEEcCC
Q psy12817 633 SAD--LVVSLLP 642 (1201)
Q Consensus 633 ~~D--VVIs~lP 642 (1201)
+.| +|+.+..
T Consensus 79 ~~~~~~i~h~Aa 90 (346)
T d1ek6a_ 79 KYSFMAVIHFAG 90 (346)
T ss_dssp HCCEEEEEECCS
T ss_pred cccccccccccc
Confidence 655 5655553
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=95.97 E-value=0.0086 Score=58.96 Aligned_cols=97 Identities=10% Similarity=0.079 Sum_probs=63.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHH----Hhhc--cCCcEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNL----SGLV--RSADLV 637 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L----~elI--~~~DVV 637 (1201)
...+|+|+|+|.+|..++..+...+-.+|+++++++++.+. ++++ +... .+|..+.+..+. .++. .++|+|
T Consensus 28 ~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~-a~~l-Ga~~-vi~~~~~~~~~~~~~i~~~~~~~g~Dvv 104 (182)
T d1vj0a2 28 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKL-AEEI-GADL-TLNRRETSVEERRKAIMDITHGRGADFI 104 (182)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHH-HHHT-TCSE-EEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCccchhheecccccccccccccccccccccc-cccc-cceE-EEeccccchHHHHHHHHHhhCCCCceEE
Confidence 34799999999999999998877653479999999998875 4555 3332 345554112122 2222 248999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEc
Q psy12817 638 VSLLPYNLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 638 Is~lP~~~h~~VakacIeaGkh~VD~ 663 (1201)
|+|++.....+.+-.+++.|-+++..
T Consensus 105 id~vG~~~~~~~a~~~l~~~G~iv~~ 130 (182)
T d1vj0a2 105 LEATGDSRALLEGSELLRRGGFYSVA 130 (182)
T ss_dssp EECSSCTTHHHHHHHHEEEEEEEEEC
T ss_pred eecCCchhHHHHHHHHhcCCCEEEEE
Confidence 99997654445555666665555544
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=95.96 E-value=0.0067 Score=56.69 Aligned_cols=107 Identities=15% Similarity=0.055 Sum_probs=73.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh-ccCCcEEEEcCCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL-VRSADLVVSLLPYN 644 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el-I~~~DVVIs~lP~~ 644 (1201)
|.|+|+|+|.+|+.+++.|.. ..|+|.+.++++.+.+.. .++.++..|.++ ++.|.++ +.+++.||.+++..
T Consensus 1 kHivI~G~g~~g~~l~~~L~~---~~i~vi~~d~~~~~~~~~--~~~~~i~Gd~~~--~~~L~~a~i~~A~~vi~~~~~d 73 (129)
T d2fy8a1 1 RHVVICGWSESTLECLRELRG---SEVFVLAEDENVRKKVLR--SGANFVHGDPTR--VSDLEKANVRGARAVIVNLESD 73 (129)
T ss_dssp CCEEEESCCHHHHHHHHTSCG---GGEEEEESCTTHHHHHHH--TTCEEEESCTTS--HHHHHHTTCTTCSEEEECCSSH
T ss_pred CEEEEECCCHHHHHHHHHHcC---CCCEEEEcchHHHHHHHh--cCccccccccCC--HHHHHHhhhhcCcEEEEeccch
Confidence 468999999999999999853 357888999998887754 378899999998 7777654 67899999999864
Q ss_pred cc-HHHHHHHHHc--CCeEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 645 LH-HHVAEFCIQH--GKNLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 645 ~h-~~VakacIea--Gkh~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
.. ..++..+-+. ..+++........... .+++|+-
T Consensus 74 ~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~----l~~~G~d 111 (129)
T d2fy8a1 74 SETIHCILGIRKIDESVRIIAEAERYENIEQ----LRMAGAD 111 (129)
T ss_dssp HHHHHHHHHHHHHCSSSCEEEECSSGGGHHH----HHHHHCS
T ss_pred hhhHHHHHHHHHHCCCceEEEEEcCHHHHHH----HHHCCCC
Confidence 32 2233333232 3355555443333333 3455653
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=95.95 E-value=0.021 Score=55.71 Aligned_cols=99 Identities=18% Similarity=0.285 Sum_probs=69.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCC-CCeEE--EEeCCHHHHHHHHHHcCCeeEEEe-ecCC----------------C
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDE-NIHIT--LGSLLKEDIDKVTNEFGRVEATLI-DVNN----------------G 622 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~-~~~Vt--VadR~~ekAe~La~~~~~v~~v~l-DV~D----------------~ 622 (1201)
++|+|.|+| +|.||....+.+.+.+ .++|. .+.++.+.+.+.+.+| +...+.+ |-.. .
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef-~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~ 79 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRT-NAKRAVIADPSLYNDLKEALAGSSVEAAA 79 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHT-TCSEEEESCGGGHHHHHHHTTTCSSEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhh-ccccceeccHHHHHHHHHHhhhccccccc
Confidence 479999999 7999999999998764 35644 4678888888888877 2222221 1000 0
Q ss_pred CchHHHhh-ccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEc
Q psy12817 623 GSDNLSGL-VRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 623 ~~e~L~el-I~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~ 663 (1201)
..+.+.++ ..++|+|++++.......-...|+++|+.+.-+
T Consensus 80 g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA 121 (150)
T d1r0ka2 80 GADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA 121 (150)
T ss_dssp SHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred CccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence 02223322 236899999998888888889999999987765
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=95.95 E-value=0.0082 Score=62.24 Aligned_cols=78 Identities=15% Similarity=0.272 Sum_probs=60.1
Q ss_pred cCCCeEEEEcC-c--hhHHHHHHHHHhCCCCeEEEEeCCHHHH---HHHHHHcCCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLGA-G--YVSRPLIEYLHRDENIHITLGSLLKEDI---DKVTNEFGRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILGA-G--~VG~~va~~La~~~~~~VtVadR~~ekA---e~La~~~~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|+++|.|+ | .+|+.+++.|++. +.+|.+.+|+.+.. ++......+...++.|++| .++++++++
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~-Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 82 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQ--DEELDALFAGVKE 82 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHhhhccCcccccccccCC--HHHHHHHHHHHHH
Confidence 56789999995 5 6999999999987 57899999986533 3344444567788999998 777777654
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 83 ~~g~iDilVnnag~ 96 (256)
T d1ulua_ 83 AFGGLDYLVHAIAF 96 (256)
T ss_dssp HHSSEEEEEECCCC
T ss_pred hcCCceEEEecccc
Confidence 47999998753
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.94 E-value=0.0048 Score=58.65 Aligned_cols=106 Identities=16% Similarity=0.255 Sum_probs=76.4
Q ss_pred CCCeEEEEcC----chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLGA----GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGA----G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
..++|+|+|+ |..|..+.++|.+....+|+.++...+. ..+.+. ..++.++=...|+|+.
T Consensus 7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~-------i~G~~~---------y~sl~dlp~~vDlvvi 70 (129)
T d2csua1 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEE-------VQGVKA---------YKSVKDIPDEIDLAII 70 (129)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSE-------ETTEEC---------BSSTTSCSSCCSEEEE
T ss_pred CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccc-------cCCeEe---------ecchhhcCCCCceEEE
Confidence 4689999994 8899999999977555688888876432 223332 1234444457999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEE-Ecc--C--ChH----HHHHHHHHHHHcCCEEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLV-TAS--Y--LSP----EMMALHERAASAGITVL 685 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~V-D~S--y--vs~----e~~eLde~AkeAGVtil 685 (1201)
++|...-.++++.|++.|+.-+ -.+ | ..+ ..++|.+.|+++|+.++
T Consensus 71 ~vp~~~~~~~~~~~~~~g~~~~vi~s~Gf~e~~~~~~~~~~~l~~~a~~~girv~ 125 (129)
T d2csua1 71 VVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRII 125 (129)
T ss_dssp CSCHHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred ecChHHhHHHHHHHHHcCCCEEEEecccccccchhhHHHHHHHHHHHHHcCCEEe
Confidence 9999888999999999999843 332 2 112 23567788999999886
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=95.93 E-value=0.0014 Score=63.11 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=48.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHc-------CCeeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEF-------GRVEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~-------~~v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
+||.|||+|.||..++..|+.++- -++.+.|+++++++..+..+ +..... ..| .+.++++|+|
T Consensus 1 mKI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~---~~~------~~~~~~adiv 71 (140)
T d1a5za1 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY---AGD------YADLKGSDVV 71 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE---ECC------GGGGTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhcccccccccccccccc---CCc------HHHhcCCCEE
Confidence 699999999999999988876543 36999999998887655432 122211 112 2346799999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
|.+...
T Consensus 72 vitag~ 77 (140)
T d1a5za1 72 IVAAGV 77 (140)
T ss_dssp EECCCC
T ss_pred EEeccc
Confidence 999843
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.92 E-value=0.0073 Score=62.98 Aligned_cols=78 Identities=17% Similarity=0.192 Sum_probs=61.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
...|.|+|.| ++.+|+.+++.|++. +++|++. +|+.+.++++.+.+ .++..+.+|++| .++++++++
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~-G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~--~~~v~~~~~~~~~ 80 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRR-GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK--PSEVVALFDKAVS 80 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCC--HHHHHHHHHHHHH
Confidence 4568999999 689999999999987 5787774 66766666665543 357789999998 777777664
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 81 ~~g~idilinnag~ 94 (259)
T d1ja9a_ 81 HFGGLDFVMSNSGM 94 (259)
T ss_dssp HHSCEEEEECCCCC
T ss_pred HcCCCcEEEecccc
Confidence 57999999864
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=95.91 E-value=0.0078 Score=58.32 Aligned_cols=71 Identities=18% Similarity=0.198 Sum_probs=49.2
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
|||.|||+|.||..++..|+.++- -++.+.|+++++++..+..+ .+.... .-..| . +.++++|+||
T Consensus 2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~-~~~~d--~----~~l~~adiVV 74 (146)
T d1hyha1 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGN-IVIND--W----AALADADVVI 74 (146)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCE-EEESC--G----GGGTTCSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccc-eeccC--H----HHhccccEEE
Confidence 799999999999999998876543 37999999999876555432 111111 11122 2 3457899999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
.+...
T Consensus 75 itaG~ 79 (146)
T d1hyha1 75 STLGN 79 (146)
T ss_dssp ECCSC
T ss_pred Eeccc
Confidence 98753
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.89 E-value=0.011 Score=61.99 Aligned_cols=78 Identities=15% Similarity=0.190 Sum_probs=61.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL-KEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR---- 632 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~-~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~---- 632 (1201)
.+.|.++|.| ++.+|+.+++.|++. +.+|++.+|+ .+.++++++.+ .++.++.+|++| ++++.++++
T Consensus 16 L~gK~~lITGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~--~~~v~~~~~~~~~ 92 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV--VEDIVRMFEEAVK 92 (272)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCC--HHHHHHHHHHHHH
Confidence 5568999999 799999999999997 5889888876 55566555433 457788899998 788777654
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|++|+....
T Consensus 93 ~~g~idilV~nag~ 106 (272)
T d1g0oa_ 93 IFGKLDIVCSNSGV 106 (272)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCCcccccccc
Confidence 47999999854
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.88 E-value=0.0072 Score=60.43 Aligned_cols=41 Identities=15% Similarity=0.238 Sum_probs=35.4
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKV 605 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~L 605 (1201)
..+||.|||+|.||+.++..++.. +++|++.|++++.+++.
T Consensus 3 ~I~~vaViGaG~mG~~iA~~~a~~-G~~V~l~D~~~~~l~~~ 43 (186)
T d1wdka3 3 DVKQAAVLGAGIMGGGIAYQSASK-GTPILMKDINEHGIEQG 43 (186)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHT-TCCEEEECSSHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC-CCeEEEEECCHHHHhhh
Confidence 468999999999999999888876 68999999998866543
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.87 E-value=0.0087 Score=60.52 Aligned_cols=100 Identities=17% Similarity=0.126 Sum_probs=70.7
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.++.|+|.|++|+...+.++.+|. ++..|+...... .....+-. +.
T Consensus 46 eL~gktvgIiG~G~IG~~va~~l~~fg~----------------~v~~~d~~~~~~--~~~~~~~~------------~~ 95 (193)
T d1mx3a1 46 RIRGETLGIIGLGRVGQAVALRAKAFGF----------------NVLFYDPYLSDG--VERALGLQ------------RV 95 (193)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC----------------EEEEECTTSCTT--HHHHHTCE------------EC
T ss_pred eeeCceEEEeccccccccceeeeecccc----------------ceeeccCccccc--chhhhccc------------cc
Confidence 4556899999999999999999999994 455565432221 11111110 01
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCe
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSI 343 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsi 343 (1201)
+. .+++++.+|+|+.++--.+.+-.||..+.++. ||+| ++++-+| .|+-|
T Consensus 96 ~~-l~~ll~~sD~i~~~~plt~~T~~li~~~~l~~-mk~~------------------a~lIN~s--RG~iv 145 (193)
T d1mx3a1 96 ST-LQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQ-MRQG------------------AFLVNTA--RGGLV 145 (193)
T ss_dssp SS-HHHHHHHCSEEEECCCCCTTCTTSBSHHHHTT-SCTT------------------EEEEECS--CTTSB
T ss_pred cc-hhhccccCCEEEEeecccccchhhhhHHHHhc-cCCC------------------CeEEecC--CceEE
Confidence 11 23567789999999988888889999999999 9999 8888765 45544
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=95.85 E-value=0.004 Score=63.86 Aligned_cols=57 Identities=16% Similarity=0.355 Sum_probs=47.1
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLLP 642 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~lP 642 (1201)
|||+|+| +|++|+.++++|.++ +++|+..+|+. +|+.| .+.++++++ +.|+||+|..
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~-g~~Vi~~~r~~-----------------~D~~d--~~~~~~~l~~~~~d~vih~a~ 61 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGK-NVEVIPTDVQD-----------------LDITN--VLAVNKFFNEKKPNVVINCAA 61 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTS-SEEEEEECTTT-----------------CCTTC--HHHHHHHHHHHCCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCEEEEeechh-----------------ccCCC--HHHHHHHHHHcCCCEEEeecc
Confidence 6799999 599999999999875 67888888752 37777 788888887 5699999974
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=95.78 E-value=0.017 Score=58.52 Aligned_cols=123 Identities=15% Similarity=0.168 Sum_probs=81.7
Q ss_pred CccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccc
Q psy12817 191 KSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLY 270 (1201)
Q Consensus 191 ~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y 270 (1201)
..+.-.+|.|+|.|++|+...+.++.+|. ++.+|+..... +. .. . -.+
T Consensus 41 ~~l~~ktvgIiG~G~IG~~va~~l~~fg~----------------~v~~~d~~~~~--------~~--~~-----~-~~~ 88 (199)
T d1dxya1 41 KELGQQTVGVMGTGHIGQVAIKLFKGFGA----------------KVIAYDPYPMK--------GD--HP-----D-FDY 88 (199)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC----------------EEEEECSSCCS--------SC--CT-----T-CEE
T ss_pred ccccceeeeeeecccccccccccccccce----------------eeeccCCccch--------hh--hc-----c-hhH
Confidence 35667899999999999999999999994 45555432110 00 00 0 011
Q ss_pred cchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCCCCeeeecccc
Q psy12817 271 RSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPGGSIEFMNECT 350 (1201)
Q Consensus 271 ~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~GGsiE~~~~~T 350 (1201)
.+ .+++++.+|+|+.++--.+.+-.+|..+.++. ||+| ++++-+| .|+-|.-
T Consensus 89 ~~--l~~l~~~~D~v~~~~plt~~T~~li~~~~l~~-mk~~------------------a~lIN~a--RG~vvde----- 140 (199)
T d1dxya1 89 VS--LEDLFKQSDVIDLHVPGIEQNTHIINEAAFNL-MKPG------------------AIVINTA--RPNLIDT----- 140 (199)
T ss_dssp CC--HHHHHHHCSEEEECCCCCGGGTTSBCHHHHHH-SCTT------------------EEEEECS--CTTSBCH-----
T ss_pred HH--HHHHHHhcccceeeecccccccccccHHHhhc-cCCc------------------eEEEecc--cHhhhhh-----
Confidence 11 23567789999999887777778999999999 9999 7777665 5554432
Q ss_pred CCCCCeeeccCCCCccccccccCCeEEEeeCCcCCC
Q psy12817 351 TIDTPFCLYDADSNKDTKSFKGPGVLVCSIDNMPTQ 386 (1201)
Q Consensus 351 Tid~P~~~yd~~~~~~~~~~~~~GV~i~~VdNLPs~ 386 (1201)
.- +++. -...-+.-++.|=++.|
T Consensus 141 ----~a-L~~a--------L~~g~i~ga~lDV~~~E 163 (199)
T d1dxya1 141 ----QA-MLSN--------LKSGKLAGVGIDTYEYE 163 (199)
T ss_dssp ----HH-HHHH--------HHTTSEEEEEESSCTTH
T ss_pred ----HH-HHHH--------HhcCCcceEeccccCCC
Confidence 11 1110 12233777888988877
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.77 E-value=0.019 Score=58.33 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=77.6
Q ss_pred cccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-CCcEEEE
Q psy12817 561 QTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-SADLVVS 639 (1201)
Q Consensus 561 ~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-~~DVVIs 639 (1201)
++.+.++|+|-|.|.||+.++++|.+. +.+|+++|.+.++...... + +.+.+ + .+ +++. +||+++=
T Consensus 23 ~~L~gk~v~IqG~G~VG~~~A~~L~~~-Gakvvv~d~d~~~~~~~~~-~-g~~~~-----~--~~---~~~~~~~DI~iP 89 (201)
T d1c1da1 23 GSLDGLTVLVQGLGAVGGSLASLAAEA-GAQLLVADTDTERVAHAVA-L-GHTAV-----A--LE---DVLSTPCDVFAP 89 (201)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH-T-TCEEC-----C--GG---GGGGCCCSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEecchHHHHHHHHh-h-ccccc-----C--cc---ccccccceeeec
Confidence 356789999999999999999999997 5899999999988876543 2 33321 1 22 2333 7999997
Q ss_pred cC-CCcccHHHHHHHHHcCCeEEEccC---ChHHHHHHHHHHHHcCCEEEecc
Q psy12817 640 LL-PYNLHHHVAEFCIQHGKNLVTASY---LSPEMMALHERAASAGITVLNEV 688 (1201)
Q Consensus 640 ~l-P~~~h~~VakacIeaGkh~VD~Sy---vs~e~~eLde~AkeAGVtil~e~ 688 (1201)
|. +...+...++ +-++.+|...- .+++ +.++..+++|+.++++.
T Consensus 90 cA~~~~I~~~~a~---~i~ak~i~e~AN~p~~~~--~~~~~L~~rgI~~iPD~ 137 (201)
T d1c1da1 90 CAMGGVITTEVAR---TLDCSVVAGAANNVIADE--AASDILHARGILYAPDF 137 (201)
T ss_dssp CSCSCCBCHHHHH---HCCCSEECCSCTTCBCSH--HHHHHHHHTTCEECCHH
T ss_pred ccccccccHHHHh---hhhhheeeccCCCCcchh--hHHHHhcccceEEEehh
Confidence 75 6667777666 34667776642 2222 24556788999998843
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=95.74 E-value=0.0031 Score=62.28 Aligned_cols=74 Identities=9% Similarity=0.154 Sum_probs=51.9
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcC------CeeEEEeecCCCCchHHHhhccCCc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFG------RVEATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~------~v~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
.+.+||.|||+|.||..++..|..++-. ++.++|+++++++..+..+. +...+ .-..| . +.++++|
T Consensus 18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~-~~~~d--~----~~~~~ad 90 (160)
T d1i0za1 18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKI-VADKD--Y----SVTANSK 90 (160)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEE-EECSS--G----GGGTTCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeE-Eeccc--h----hhccccc
Confidence 4468999999999999999999887544 69999999988766554331 11111 11122 2 3467899
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||.+...
T Consensus 91 iVVitAg~ 98 (160)
T d1i0za1 91 IVVVTAGV 98 (160)
T ss_dssp EEEECCSC
T ss_pred EEEEecCC
Confidence 99998853
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.74 E-value=0.0087 Score=62.86 Aligned_cols=72 Identities=17% Similarity=0.158 Sum_probs=55.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-----HHHHHHHHcCCeeEEEeecCCCCchHHHhhccC--CcEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-----DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRS--ADLV 637 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-----kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~--~DVV 637 (1201)
|+|+|.| +|++|+.++++|.++ +++|+.++|... +.+.+... ++++.+.+|+.| .+.+.+.+.+ .+++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~l~~~~~~-~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~ 76 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLRELGIE-GDIQYEDGDMAD--ACSVQRAVIKAQPQEV 76 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCHHHHHTTCG-GGEEEEECCTTC--HHHHHHHHHHHCCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCCCcccHHHHHHhccc-CCcEEEEccccC--hHHhhhhhcccccccc
Confidence 6999999 799999999999987 689999988542 33333222 468899999998 7888776654 5666
Q ss_pred EEcC
Q psy12817 638 VSLL 641 (1201)
Q Consensus 638 Is~l 641 (1201)
+.+.
T Consensus 77 ~~~a 80 (321)
T d1rpna_ 77 YNLA 80 (321)
T ss_dssp EECC
T ss_pred cccc
Confidence 6665
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.73 E-value=0.0051 Score=61.69 Aligned_cols=69 Identities=14% Similarity=0.125 Sum_probs=52.6
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
....++|+|+|+|.+|+.+++.+... +.+|...|+.....+.... +++ ...++++++++|+|+.++
T Consensus 41 ~l~~k~vgiiG~G~IG~~va~~~~~f-g~~v~~~d~~~~~~~~~~~---~~~----------~~~l~ell~~sDiv~~~~ 106 (184)
T d1ygya1 41 EIFGKTVGVVGLGRIGQLVAQRIAAF-GAYVVAYDPYVSPARAAQL---GIE----------LLSLDDLLARADFISVHL 106 (184)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTT-TCEEEEECTTSCHHHHHHH---TCE----------ECCHHHHHHHCSEEEECC
T ss_pred cccceeeeeccccchhHHHHHHhhhc-cceEEeecCCCChhHHhhc---Cce----------eccHHHHHhhCCEEEEcC
Confidence 45578999999999999999998765 5789999987655443222 222 235788899999999999
Q ss_pred CCc
Q psy12817 642 PYN 644 (1201)
Q Consensus 642 P~~ 644 (1201)
|..
T Consensus 107 Plt 109 (184)
T d1ygya1 107 PKT 109 (184)
T ss_dssp CCS
T ss_pred CCC
Confidence 964
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=95.72 E-value=0.011 Score=59.49 Aligned_cols=89 Identities=8% Similarity=0.065 Sum_probs=63.8
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.++.|+|.|++|+.-.+.++.+|. ++.+|+........... .+.. +.
T Consensus 44 ~l~g~tvgIiG~G~IG~~va~~l~~fg~----------------~v~~~d~~~~~~~~~~~-~~~~------------~~ 94 (191)
T d1gdha1 44 KLDNKTLGIYGFGSIGQALAKRAQGFDM----------------DIDYFDTHRASSSDEAS-YQAT------------FH 94 (191)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC----------------EEEEECSSCCCHHHHHH-HTCE------------EC
T ss_pred eecccceEEeecccchHHHHHHHHhhcc----------------ccccccccccccchhhc-cccc------------cc
Confidence 4556899999999999999999999984 45666643332221111 1211 11
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
..+ +++++.+|+|+.+.-..+.+-.||+++.++. ||+|
T Consensus 95 ~~l-~~ll~~sD~v~l~~plt~~T~~li~~~~l~~-mk~~ 132 (191)
T d1gdha1 95 DSL-DSLLSVSQFFSLNAPSTPETRYFFNKATIKS-LPQG 132 (191)
T ss_dssp SSH-HHHHHHCSEEEECCCCCTTTTTCBSHHHHTT-SCTT
T ss_pred CCH-HHHHhhCCeEEecCCCCchHhheecHHHhhC-cCCc
Confidence 112 2467789999999888888889999999999 9999
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.70 E-value=0.0054 Score=64.87 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=56.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-----HHHHHHH-----HcCCeeEEEeecCCCCchHHHhhcc-
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-----DIDKVTN-----EFGRVEATLIDVNNGGSDNLSGLVR- 632 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-----kAe~La~-----~~~~v~~v~lDV~D~~~e~L~elI~- 632 (1201)
+|++||.| +|++|+.++++|.++ +++|+.++|... +...+.. ....++....|+.+ .+.+.+.++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~--~~~~~~~~~~ 77 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGK-GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTD--ASSLRRWIDV 77 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTC--HHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC-cCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccC--HHHHHHHHhh
Confidence 48899999 799999999999987 689999998432 1111111 11246788899988 778887775
Q ss_pred -CCcEEEEcCCC
Q psy12817 633 -SADLVVSLLPY 643 (1201)
Q Consensus 633 -~~DVVIs~lP~ 643 (1201)
+.|+||+|+..
T Consensus 78 ~~~D~Vih~Aa~ 89 (339)
T d1n7ha_ 78 IKPDEVYNLAAQ 89 (339)
T ss_dssp HCCSEEEECCSC
T ss_pred hccchhhhcccc
Confidence 57999999853
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=95.69 E-value=0.014 Score=60.54 Aligned_cols=78 Identities=13% Similarity=0.272 Sum_probs=60.1
Q ss_pred cCCCeEEEEcC-c--hhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-----
Q psy12817 563 EESRNVLLLGA-G--YVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV----- 631 (1201)
Q Consensus 563 ~~mkKVLILGA-G--~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI----- 631 (1201)
.+.|+++|.|+ | .||+++|+.|++. +.+|++++|+. ++++++.+..+.......|+++ .+...+++
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~-Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~ 79 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK--EEHFKSLYNSVKK 79 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccc--hhhHHHHHHHHHH
Confidence 35789999994 6 6999999999976 68999999986 3556666666667788899987 66655554
Q ss_pred --cCCcEEEEcCCC
Q psy12817 632 --RSADLVVSLLPY 643 (1201)
Q Consensus 632 --~~~DVVIs~lP~ 643 (1201)
...|++|++...
T Consensus 80 ~~g~id~lV~nag~ 93 (274)
T d2pd4a1 80 DLGSLDFIVHSVAF 93 (274)
T ss_dssp HTSCEEEEEECCCC
T ss_pred HcCCCCeEEeeccc
Confidence 457999988753
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.69 E-value=0.0044 Score=62.45 Aligned_cols=99 Identities=12% Similarity=0.137 Sum_probs=65.2
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeec--------------------CCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDV--------------------NNG 622 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV--------------------~D~ 622 (1201)
...-||+|||+|-+|...++...+. +.+|++.|.++++.+++.+.+++ ++.++. ...
T Consensus 27 V~pa~VvViGaGvaG~~Aa~~A~~l-GA~V~v~D~~~~~~~~l~~l~~~--~i~~~~~~~~~~~~~~gyA~~~s~~~~~~ 103 (183)
T d1l7da1 27 VPPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVESLGGK--FITVDDEAMKTAETAGGYAKEMGEEFRKK 103 (183)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHHTTCE--ECCC-----------------------CC
T ss_pred cCCcEEEEEcCcHHHHHHHHHHHHc-CCEEEEEeccHHHHHHHHHhhcc--eEEEeccccccccccccchhhcCHHHHHH
Confidence 3457999999999999999988877 57999999999988888765432 111110 000
Q ss_pred CchHHHhhccCCcEEEEcC--CCcccHHH----HHHHHHcCCeEEEcc
Q psy12817 623 GSDNLSGLVRSADLVVSLL--PYNLHHHV----AEFCIQHGKNLVTAS 664 (1201)
Q Consensus 623 ~~e~L~elI~~~DVVIs~l--P~~~h~~V----akacIeaGkh~VD~S 664 (1201)
..+.+.+.++++|+||.++ |..-.+.+ +-...+.|.-+||++
T Consensus 104 ~~~~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDva 151 (183)
T d1l7da1 104 QAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 151 (183)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEe
Confidence 1345677788999999986 54333222 222235555566653
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.66 E-value=0.013 Score=57.01 Aligned_cols=70 Identities=13% Similarity=0.166 Sum_probs=49.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC--------eeEEEeecCCCCchHHHhhccCCcE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR--------VEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~--------v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
+.||.|||+|.||..++..|...+-.++.+.|+++++++..+..+.. ..... .+ ..+.++++|+
T Consensus 3 ~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~---~~-----~~~~~~~adv 74 (150)
T d1t2da1 3 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG---SN-----TYDDLAGADV 74 (150)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE---EC-----CGGGGTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEe---cc-----cccccCCCcE
Confidence 46999999999999999877776555799999998877666543311 11111 11 1245578999
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
||.+..
T Consensus 75 vvitag 80 (150)
T d1t2da1 75 VIVTAG 80 (150)
T ss_dssp EEECCS
T ss_pred EEEecc
Confidence 999985
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.65 E-value=0.014 Score=56.12 Aligned_cols=70 Identities=11% Similarity=0.125 Sum_probs=48.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHc-------CCeeEEEeecCCCCchHHHhhccCCcEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEF-------GRVEATLIDVNNGGSDNLSGLVRSADLV 637 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~-------~~v~~v~lDV~D~~~e~L~elI~~~DVV 637 (1201)
|||.|||+|.||..++..|+.++-. ++.+.|+++++++..+..+ +....+ ...+ ++ +.++++|+|
T Consensus 1 MKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i--~~~~----d~-~~~~~adiV 73 (142)
T d1ojua1 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKI--VGGA----DY-SLLKGSEII 73 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEE--EEES----CG-GGGTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCcc--ccCC----CH-HHhccccEE
Confidence 6999999999999999988866543 6999999998876544222 211111 1111 22 467899999
Q ss_pred EEcCC
Q psy12817 638 VSLLP 642 (1201)
Q Consensus 638 Is~lP 642 (1201)
|.+..
T Consensus 74 vitag 78 (142)
T d1ojua1 74 VVTAG 78 (142)
T ss_dssp EECCC
T ss_pred EEecc
Confidence 99874
|
| >d1e5qa2 d.81.1.2 (A:125-391) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FwdE/GAPDH domain-like superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain family: Homoserine dehydrogenase-like domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.61 E-value=0.0018 Score=69.04 Aligned_cols=60 Identities=23% Similarity=0.476 Sum_probs=46.6
Q ss_pred chhHHHhhccccchhhhcccCCCcchhhhHHHhhhhhh-------hhccccccc-ccCcc------eeecccccc
Q psy12817 880 GLEALEALGLLNDDIIVQKQNTPIDTLSHFLRQKLNIR-------LVDYEKLVD-DEGNR------VVAFGKYAG 940 (1201)
Q Consensus 880 ~~~~l~~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~-------~~~~~~~~~-~~~~~------~~~~~~~~~ 940 (1201)
++++|+|||+|+++.+ +...||+|+||+.|++|++|. +|-|++... .+|.+ +|.||.=.|
T Consensus 191 i~~~L~wLGlf~~~~v-~~~~tp~d~L~~~Le~Kl~~~~~ErDMIvM~H~f~~~~~dG~~e~~tstlv~~G~p~G 264 (267)
T d1e5qa2 191 IVAGLKWLGIFSDKKI-TPRGNALDTLCATLEEKMQFEEGERDLVMLQHKFEIENKDGSRETRTSSLCEYGAPIG 264 (267)
T ss_dssp HHHHHHHHTTTSSSBC-CCCSSHHHHHHHHHHHHSBCCTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHhcCCCCCcc-CCCCCHHHHHHHHHHHHhCCCCCCceEEEEEEEEEEEcCCCCeEEEEEeEEEEcCCCC
Confidence 5678999999998765 568999999999999999998 788887654 34433 455665444
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.57 E-value=0.01 Score=59.14 Aligned_cols=100 Identities=19% Similarity=0.172 Sum_probs=58.1
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHH-hhccCCcEEEEcC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLS-GLVRSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~-elI~~~DVVIs~l 641 (1201)
.|||+|+| +|++|+.+++.|.+++.. +|++..|++.. ..+.+ ..+..| ..++. .+...+|+||+|+
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~------~~~~~---~~~~~d--~~~~~~~~~~~~d~vi~~~ 70 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------EHPRL---DNPVGP--LAELLPQLDGSIDTAFCCL 70 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------CCTTE---ECCBSC--HHHHGGGCCSCCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh------hcccc---cccccc--hhhhhhccccchheeeeee
Confidence 58999999 699999999999988764 57766765321 11222 233333 33333 3334589999998
Q ss_pred CCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCE
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGIT 683 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVt 683 (1201)
.......-.+.... .-.......+.+.|+++++.
T Consensus 71 g~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~v~ 104 (212)
T d2a35a1 71 GTTIKEAGSEEAFR--------AVDFDLPLAVGKRALEMGAR 104 (212)
T ss_dssp CCCHHHHSSHHHHH--------HHHTHHHHHHHHHHHHTTCC
T ss_pred eeeccccccccccc--------cchhhhhhhccccccccccc
Confidence 54432111110000 00112245566778888875
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.50 E-value=0.0054 Score=63.53 Aligned_cols=71 Identities=18% Similarity=0.176 Sum_probs=58.1
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-------CC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-------SA 634 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-------~~ 634 (1201)
.+.|+++|.| ++.+|+.+++.|++. +.+|.+.+|+.++.+ ++..+++|++| +++++++++ ..
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~-------~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i 74 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAAD-GHKVAVTHRGSGAPK-------GLFGVEVDVTD--SDAVDRAFTAVEEHQGPV 74 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCT-------TSEEEECCTTC--HHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCcchhc-------CceEEEEecCC--HHHHHHHHHHHHHhcCCc
Confidence 5678999999 689999999999987 589999999976543 46678999998 777776653 57
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|++||+...
T Consensus 75 DiLVnnAG~ 83 (237)
T d1uzma1 75 EVLVSNAGL 83 (237)
T ss_dssp SEEEEECSC
T ss_pred eEEEeeecc
Confidence 999999864
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=95.49 E-value=0.021 Score=55.09 Aligned_cols=71 Identities=21% Similarity=0.231 Sum_probs=49.4
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
.||.|||+|.||..++..|+.++-. ++.+.|+++++++..+..+ .+...+ ...+ .+ +.++++|+||
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i--~~~~----~~-~~~~daDvVV 74 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSI--DGSD----DP-EICRDADMVV 74 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEE--EEES----CG-GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCcee--ecCC----CH-HHhhCCcEEE
Confidence 5899999999999999998876543 6999999998876544322 111111 1122 23 3467899999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
.+...
T Consensus 75 itaG~ 79 (143)
T d1llda1 75 ITAGP 79 (143)
T ss_dssp ECCCC
T ss_pred Eeccc
Confidence 99843
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=95.49 E-value=0.011 Score=57.87 Aligned_cols=79 Identities=8% Similarity=0.099 Sum_probs=53.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhcc-CCcEEEEc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLVR-SADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI~-~~DVVIs~ 640 (1201)
....+|+|+|+|.+|..++..+...+...|+++++++++.+.. +++ ++.. .+|..+.+ .+.+.++-. ++|+||+|
T Consensus 27 ~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~-Ga~~-~i~~~~~~~~~~i~~~t~gg~D~vid~ 103 (174)
T d1f8fa2 27 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL-GATH-VINSKTQDPVAAIKEITDGGVNFALES 103 (174)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH-TCSE-EEETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred CCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc-CCeE-EEeCCCcCHHHHHHHHcCCCCcEEEEc
Confidence 3457899999999999999988777666788899999887764 455 3322 24555401 122223222 48999999
Q ss_pred CCCc
Q psy12817 641 LPYN 644 (1201)
Q Consensus 641 lP~~ 644 (1201)
++..
T Consensus 104 ~G~~ 107 (174)
T d1f8fa2 104 TGSP 107 (174)
T ss_dssp SCCH
T ss_pred CCcH
Confidence 9743
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.47 E-value=0.015 Score=60.25 Aligned_cols=77 Identities=14% Similarity=0.162 Sum_probs=57.4
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHc----C--CeeEEEeecCCCCchHHHhhcc--
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRD--ENIHITLGSLLKEDIDKVTNEF----G--RVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~--~~~~VtVadR~~ekAe~La~~~----~--~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
+.|-++|-| ++.+|+.+++.|++. .+.+|++++|+.++++++++++ + ++.++.+|++| ++.++++++
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~--~~~v~~l~~~~ 82 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT--EAGVQRLLSAV 82 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS--HHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCC--HHHHHHHHHHH
Confidence 334444448 679999999999873 5789999999999988877643 3 36778899998 777776652
Q ss_pred ---------CCcEEEEcCC
Q psy12817 633 ---------SADLVVSLLP 642 (1201)
Q Consensus 633 ---------~~DVVIs~lP 642 (1201)
..|++||...
T Consensus 83 ~~~~~~~~~~~~~lvnnag 101 (259)
T d1oaaa_ 83 RELPRPEGLQRLLLINNAA 101 (259)
T ss_dssp HHSCCCTTCCEEEEEECCC
T ss_pred HHhhhhccCceEEEEeccc
Confidence 2467888753
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.46 E-value=0.012 Score=66.40 Aligned_cols=91 Identities=13% Similarity=0.145 Sum_probs=60.6
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHH----HHcCCee--EEEee
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK-------------------EDIDKVT----NEFGRVE--ATLID 618 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~-------------------ekAe~La----~~~~~v~--~v~lD 618 (1201)
+..||+|+|+|.+|..++++|+..+--+++++|.+. .+++.++ +..|+++ +...+
T Consensus 36 ~~~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~ 115 (426)
T d1yovb1 36 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNK 115 (426)
T ss_dssp HHCCEEEECSSTTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSC
T ss_pred hcCeEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeecc
Confidence 357999999999999999999987655789887531 1443333 3335544 33333
Q ss_pred cCCCCchHHHhhccCCcEEEEcCCCc-ccHHHHHHHHHcCC
Q psy12817 619 VNNGGSDNLSGLVRSADLVVSLLPYN-LHHHVAEFCIQHGK 658 (1201)
Q Consensus 619 V~D~~~e~L~elI~~~DVVIs~lP~~-~h~~VakacIeaGk 658 (1201)
+.+ .-.++++++|+||+|+-.. ....+-+.|+...+
T Consensus 116 i~~----~~~~~~~~~DlVi~~~Dn~~aR~~in~~c~~l~k 152 (426)
T d1yovb1 116 IQD----FNDTFYRQFHIIVCGLDSIIARRWINGMLISLLN 152 (426)
T ss_dssp GGG----BCHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCC
T ss_pred ccc----hHHHHHHhcchheeccCcHHHHHHHHHHHHHhhc
Confidence 333 2246788999999999543 33456677776544
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.45 E-value=0.02 Score=56.16 Aligned_cols=73 Identities=8% Similarity=0.039 Sum_probs=50.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHcC------CeeEEEeecCCCCchHHHhhccCCc
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENI-HITLGSLLKEDIDKVTNEFG------RVEATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~-~VtVadR~~ekAe~La~~~~------~v~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
.++.||.|||+|.||..++..|...+-. ++.+.|++.++++..+..+. +...+ .-..| . +.++++|
T Consensus 17 ~~~~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~-~~~~d--~----~~~~~ad 89 (159)
T d2ldxa1 17 LSRCKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKI-VFGKD--Y----NVSANSK 89 (159)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEE-EEESS--G----GGGTTEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeE-Eeccc--h----hhhcccc
Confidence 3456899999999999999998877544 69999999988765554331 11111 11122 2 3457899
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
+||.+..
T Consensus 90 ivvitag 96 (159)
T d2ldxa1 90 LVIITAG 96 (159)
T ss_dssp EEEECCS
T ss_pred EEEEecc
Confidence 9999874
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=95.41 E-value=0.017 Score=55.50 Aligned_cols=72 Identities=21% Similarity=0.280 Sum_probs=49.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-------C-CeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-------G-RVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-------~-~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
++||.|||+|.||..++..|+..+-.++.+.|.++++++..+..+ + ..... .++ ..+ .++++|+
T Consensus 1 r~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~---~~~----d~~-~~~~adv 72 (142)
T d1uxja1 1 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVT---GTN----NYA-DTANSDV 72 (142)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEE---EES----CGG-GGTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEE---ecC----cHH-HhcCCCE
Confidence 379999999999999999888766568999999888766555432 1 11111 111 122 3578999
Q ss_pred EEEcCCCc
Q psy12817 637 VVSLLPYN 644 (1201)
Q Consensus 637 VIs~lP~~ 644 (1201)
||.+....
T Consensus 73 vvitag~~ 80 (142)
T d1uxja1 73 IVVTSGAP 80 (142)
T ss_dssp EEECCSCC
T ss_pred EEEeeecc
Confidence 99998543
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.39 E-value=0.0067 Score=61.40 Aligned_cols=69 Identities=13% Similarity=0.095 Sum_probs=52.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.||+.+++.|... +.+|...|+.......-. . ++.. .+.++++++++|+|+.++|
T Consensus 47 L~gktvgIiG~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~--~-~~~~---------~~~l~~ll~~sD~i~~~~p 113 (193)
T d1mx3a1 47 IRGETLGIIGLGRVGQAVALRAKAF-GFNVLFYDPYLSDGVERA--L-GLQR---------VSTLQDLLFHSDCVTLHCG 113 (193)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-TCEEEEECTTSCTTHHHH--H-TCEE---------CSSHHHHHHHCSEEEECCC
T ss_pred eeCceEEEeccccccccceeeeecc-ccceeeccCcccccchhh--h-cccc---------ccchhhccccCCEEEEeec
Confidence 4578999999999999999999865 689999998755322211 1 2221 2368889999999999998
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 114 lt 115 (193)
T d1mx3a1 114 LN 115 (193)
T ss_dssp CC
T ss_pred cc
Confidence 54
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.37 E-value=0.012 Score=58.44 Aligned_cols=112 Identities=17% Similarity=0.237 Sum_probs=68.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCC-------------eeEEEeecCCCCchHHHhhcc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGR-------------VEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~-------------v~~v~lDV~D~~~e~L~elI~ 632 (1201)
|||.|+|+|++|.+++..++ . +++|+.+|.++++.+.+.+...- ......+. .....+.
T Consensus 1 MkI~ViGlG~vGl~~a~~~a-~-g~~V~g~Din~~~v~~l~~g~~p~~e~~l~~~~~~~~~~~~~~~------~~~~~~~ 72 (196)
T d1dlja2 1 MKIAVAGSGYVGLSLGVLLS-L-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATL------DSKAAYK 72 (196)
T ss_dssp CEEEEECCSHHHHHHHHHHT-T-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEES------CHHHHHH
T ss_pred CEEEEECCChhHHHHHHHHH-C-CCcEEEEECCHHHHHHHhhcccccchhhHHHHhhhhhhhhhccc------hhhhhhh
Confidence 78999999999999997665 4 68999999999998887753210 00011111 1233356
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHH
Q psy12817 633 SADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDH 696 (1201)
Q Consensus 633 ~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdh 696 (1201)
++|+++.|+|.... ...+..+.+++....+.+. ....+..++.+.-+-||-..
T Consensus 73 ~~~ii~v~vpt~~~---------~~~~~~~~~~v~~~~~~~~--~~~~~~~iii~Stv~pgt~~ 125 (196)
T d1dlja2 73 EAELVIIATPTNYN---------SRINYFDTQHVETVIKEVL--SVNSHATLIIKSTIPIGFIT 125 (196)
T ss_dssp HCSEEEECCCCCEE---------TTTTEECCHHHHHHHHHHH--HHCSSCEEEECSCCCTTHHH
T ss_pred ccccccccCCcccc---------ccCCCcceeEEeehhhhhh--hcccceeEEeeeecCceeee
Confidence 79999999987643 1122334433322222221 12345666777777777543
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=95.31 E-value=0.019 Score=54.89 Aligned_cols=69 Identities=14% Similarity=0.101 Sum_probs=47.8
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHc--------CCeeEEEeecCCCCchHHHhhccCCcE
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN-IHITLGSLLKEDIDKVTNEF--------GRVEATLIDVNNGGSDNLSGLVRSADL 636 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~-~~VtVadR~~ekAe~La~~~--------~~v~~v~lDV~D~~~e~L~elI~~~DV 636 (1201)
|||.|+|+|.||..++..|+..+- -++.+.|+++++++..+... ...+.. .++ + .+.++++|+
T Consensus 1 mKI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~---~~~-~----~~~~~dadv 72 (142)
T d1guza1 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVT---GSN-D----YADTANSDI 72 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEE---EES-C----GGGGTTCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEE---ecC-C----HHHhcCCeE
Confidence 689999999999999998887653 37999999987765443221 112211 112 1 234679999
Q ss_pred EEEcCC
Q psy12817 637 VVSLLP 642 (1201)
Q Consensus 637 VIs~lP 642 (1201)
||.+..
T Consensus 73 vvitag 78 (142)
T d1guza1 73 VIITAG 78 (142)
T ss_dssp EEECCS
T ss_pred EEEEEe
Confidence 999974
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=95.29 E-value=0.0075 Score=60.40 Aligned_cols=64 Identities=20% Similarity=0.197 Sum_probs=50.3
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.+++.+... +.+|.+.||++.+. ... . .+.++++++++|+|+.++|
T Consensus 40 l~gk~vgIiG~G~IG~~va~~l~~~-g~~v~~~d~~~~~~--------~~~-----~----~~~l~ell~~sDiv~~~~p 101 (181)
T d1qp8a1 40 IQGEKVAVLGLGEIGTRVGKILAAL-GAQVRGFSRTPKEG--------PWR-----F----TNSLEEALREARAAVCALP 101 (181)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHT-TCEEEEECSSCCCS--------SSC-----C----BSCSHHHHTTCSEEEECCC
T ss_pred ccCceEEEeccccccccceeeeecc-cccccccccccccc--------cee-----e----eechhhhhhccchhhcccc
Confidence 4578999999999999999999876 57999999875321 011 1 2357889999999999999
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 102 l~ 103 (181)
T d1qp8a1 102 LN 103 (181)
T ss_dssp CS
T ss_pred cc
Confidence 64
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.21 E-value=0.0094 Score=59.57 Aligned_cols=81 Identities=16% Similarity=0.207 Sum_probs=60.5
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
-.+.|+|.|||+|.-|++.+..|... +++|+|.-|.-++-.+.+.. .+.+. -.+.++++.+|+|+.++
T Consensus 13 ~ik~k~IaViGYGsQG~AhAlNLrDS-G~~V~VGLr~gs~s~~~A~~-~Gf~v----------~~~~eA~~~aDiim~L~ 80 (182)
T d1np3a2 13 IIQGKKVAIIGYGSQGHAHACNLKDS-GVDVTVGLRSGSATVAKAEA-HGLKV----------ADVKTAVAAADVVMILT 80 (182)
T ss_dssp HHHTSCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTCHHHHHHHH-TTCEE----------ECHHHHHHTCSEEEECS
T ss_pred HHCCCEEEEEeeCcHhHHHHhhhhhc-CCCEEEEcCCCCccHHHHhh-hcccc----------ccHHHHhhhcCeeeeec
Confidence 35679999999999999999999886 57999988865544333433 24432 24677888999999999
Q ss_pred CCcccHHHHHHHH
Q psy12817 642 PYNLHHHVAEFCI 654 (1201)
Q Consensus 642 P~~~h~~VakacI 654 (1201)
|...+..+-+.-+
T Consensus 81 PD~~q~~vy~~~I 93 (182)
T d1np3a2 81 PDEFQGRLYKEEI 93 (182)
T ss_dssp CHHHHHHHHHHHT
T ss_pred chHHHHHHHHHhh
Confidence 9877777665433
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.20 E-value=0.038 Score=53.23 Aligned_cols=71 Identities=13% Similarity=0.242 Sum_probs=46.5
Q ss_pred CeEEEEcC-chhHHHHHHHHHhCCCC-eEEEEeCCH--HHHHHHHHHc--------CCeeEEEeecCCCCchHHHhhccC
Q psy12817 566 RNVLLLGA-GYVSRPLIEYLHRDENI-HITLGSLLK--EDIDKVTNEF--------GRVEATLIDVNNGGSDNLSGLVRS 633 (1201)
Q Consensus 566 kKVLILGA-G~VG~~va~~La~~~~~-~VtVadR~~--ekAe~La~~~--------~~v~~v~lDV~D~~~e~L~elI~~ 633 (1201)
|||.|+|+ |.||..++..|+.++-. ++.+.|+++ ++++.++..+ .+++.. ..-.+ -.+.+++
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~~~~-----d~~~l~~ 74 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIY-VESDE-----NLRIIDE 74 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEE-EEETT-----CGGGGTT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccc-cCCcc-----hHHHhcc
Confidence 68999995 99999999999877543 799999875 3444333222 112211 11111 1245679
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
+|+||.+..
T Consensus 75 aDvVVitAG 83 (145)
T d1hyea1 75 SDVVIITSG 83 (145)
T ss_dssp CSEEEECCS
T ss_pred ceEEEEecc
Confidence 999999974
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=95.10 E-value=0.015 Score=58.69 Aligned_cols=70 Identities=11% Similarity=0.160 Sum_probs=51.6
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...++|+|+|+|.+|+.+++.+... +.+|...|+........... .... .+.++++++++|+|+.++|
T Consensus 45 l~g~tvgIiG~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~~~--~~~~---------~~~l~~ll~~sD~v~l~~p 112 (191)
T d1gdha1 45 LDNKTLGIYGFGSIGQALAKRAQGF-DMDIDYFDTHRASSSDEASY--QATF---------HDSLDSLLSVSQFFSLNAP 112 (191)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSCCCHHHHHHH--TCEE---------CSSHHHHHHHCSEEEECCC
T ss_pred ecccceEEeecccchHHHHHHHHhh-ccccccccccccccchhhcc--cccc---------cCCHHHHHhhCCeEEecCC
Confidence 4579999999999999999988765 57888888865433322221 1111 3468899999999999998
Q ss_pred Cc
Q psy12817 643 YN 644 (1201)
Q Consensus 643 ~~ 644 (1201)
..
T Consensus 113 lt 114 (191)
T d1gdha1 113 ST 114 (191)
T ss_dssp CC
T ss_pred CC
Confidence 64
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=95.10 E-value=0.034 Score=58.64 Aligned_cols=75 Identities=17% Similarity=0.269 Sum_probs=54.4
Q ss_pred CeEEEEc-CchhHHHHHHHHHhCCC-----CeEEEEeCC-----HHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCC
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHRDEN-----IHITLGSLL-----KEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSA 634 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~~~~-----~~VtVadR~-----~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~ 634 (1201)
|||+|.| +|++|+.+++.|.+++. .++...|.. ......+ ...++++.+..|..+ ...........
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~--~~~~~~~~~~~ 77 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRD--AGLLARELRGV 77 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTC--HHHHHHHTTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEecccc--chhhhcccccc
Confidence 6899999 89999999999988632 245655532 1222222 223478889999987 77788888899
Q ss_pred cEEEEcCCC
Q psy12817 635 DLVVSLLPY 643 (1201)
Q Consensus 635 DVVIs~lP~ 643 (1201)
|+|+.+...
T Consensus 78 d~vi~~a~~ 86 (322)
T d1r6da_ 78 DAIVHFAAE 86 (322)
T ss_dssp CEEEECCSC
T ss_pred ceEEeeccc
Confidence 999999743
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=95.09 E-value=0.022 Score=56.21 Aligned_cols=77 Identities=9% Similarity=0.033 Sum_probs=52.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC--chHHHhhc--cCCcEEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG--SDNLSGLV--RSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~--~e~L~elI--~~~DVVIs 639 (1201)
...+|+|+|+|.+|...+..+...+-.+|+++++++++.+ +++++ +...+ +|....+ .+.+.+.. .++|+||+
T Consensus 28 ~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~~-Ga~~~-i~~~~~~~~~~~~~~~~~~~G~d~vie 104 (174)
T d1e3ia2 28 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKAL-GATDC-LNPRELDKPVQDVITELTAGGVDYSLD 104 (174)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT-TCSEE-ECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHHh-CCCcc-cCCccchhhhhhhHhhhhcCCCcEEEE
Confidence 3478999999999999999888776567999999998865 56666 33332 2322101 12222222 36899999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
|++.
T Consensus 105 ~~G~ 108 (174)
T d1e3ia2 105 CAGT 108 (174)
T ss_dssp SSCC
T ss_pred eccc
Confidence 9974
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=95.07 E-value=0.025 Score=55.85 Aligned_cols=73 Identities=21% Similarity=0.257 Sum_probs=48.3
Q ss_pred CCeEEEEcCchhHHH--HHHHHHhCC---CCeEEEEeCCHHHHHHHHHHc------CCeeEEEeecCCCCchHHHhhccC
Q psy12817 565 SRNVLLLGAGYVSRP--LIEYLHRDE---NIHITLGSLLKEDIDKVTNEF------GRVEATLIDVNNGGSDNLSGLVRS 633 (1201)
Q Consensus 565 mkKVLILGAG~VG~~--va~~La~~~---~~~VtVadR~~ekAe~La~~~------~~v~~v~lDV~D~~~e~L~elI~~ 633 (1201)
.+||.|||+|.+|.. ++..|+..+ ..+|++.|+++++++..+... -+... .+.. ..++++.+++
T Consensus 2 ~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~-~i~~----~td~~eaL~d 76 (171)
T d1obba1 2 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADL-KFEK----TMNLDDVIID 76 (171)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCC-EEEE----ESCHHHHHTT
T ss_pred CcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCe-EEEE----eCChhhcccC
Confidence 479999999999865 344455433 348999999999876543211 01111 1111 2347778899
Q ss_pred CcEEEEcCC
Q psy12817 634 ADLVVSLLP 642 (1201)
Q Consensus 634 ~DVVIs~lP 642 (1201)
+|+||++.-
T Consensus 77 ad~Vv~~~~ 85 (171)
T d1obba1 77 ADFVINTAM 85 (171)
T ss_dssp CSEEEECCC
T ss_pred CCeEeeecc
Confidence 999999974
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=95.06 E-value=0.023 Score=56.01 Aligned_cols=68 Identities=10% Similarity=0.075 Sum_probs=53.3
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...|+++|+|+|.+|+-+|+.|... +.+|+|...++-+|- .+...+.+. ..++++++.+|++|.+++
T Consensus 21 laGk~vvV~GYG~vGrG~A~~~rg~-Ga~V~V~E~DPi~al--qA~mdGf~v----------~~~~~a~~~aDi~vTaTG 87 (163)
T d1v8ba1 21 ISGKIVVICGYGDVGKGCASSMKGL-GARVYITEIDPICAI--QAVMEGFNV----------VTLDEIVDKGDFFITCTG 87 (163)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCHHHHH--HHHTTTCEE----------CCHHHHTTTCSEEEECCS
T ss_pred ecCCEEEEecccccchhHHHHHHhC-CCEEEEEecCchhhH--HHHhcCCcc----------CchhHccccCcEEEEcCC
Confidence 3468999999999999999999876 578999999996542 333334332 247888999999999997
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 88 n 88 (163)
T d1v8ba1 88 N 88 (163)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=95.06 E-value=0.022 Score=59.60 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=43.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~l 641 (1201)
+|||+|.| +|++|+.++++|.+++ ..+++.++.. .+|+.| .+.+.++++ +.|+|+.+.
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g-~~vi~~~~~~----------------~~~~~~--~~~~~~~~~~~~~d~v~~~a 62 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRG-DVELVLRTRD----------------ELNLLD--SRAVHDFFASERIDQVYLAA 62 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT-TEEEECCCTT----------------TCCTTC--HHHHHHHHHHHCCSEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCc-CEEEEecCch----------------hccccC--HHHHHHHHhhcCCCEEEEcc
Confidence 57999999 7999999999999875 4454544321 136666 777777776 479999987
Q ss_pred C
Q psy12817 642 P 642 (1201)
Q Consensus 642 P 642 (1201)
.
T Consensus 63 ~ 63 (315)
T d1e6ua_ 63 A 63 (315)
T ss_dssp C
T ss_pred h
Confidence 4
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=94.93 E-value=0.028 Score=58.21 Aligned_cols=74 Identities=14% Similarity=0.239 Sum_probs=56.7
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHc----CCeeEEEeecCCCCchHHHhhcc-------C
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLG-SLLKEDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVR-------S 633 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVa-dR~~ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~-------~ 633 (1201)
-|+|-| ++.+|+.+++.|++. +.+|.+. .|+.+.++++.++. .++.++.+|++| .++++++++ .
T Consensus 3 V~lITGas~GIG~a~a~~la~~-Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~ 79 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKA-GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK--EADVEAMMKTAIDAWGT 79 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS--HHHHHHHHHHHHHHSSC
T ss_pred EEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHHHHHHcCC
Confidence 356668 789999999999987 5788775 56777777766543 357788999998 777776654 5
Q ss_pred CcEEEEcCCC
Q psy12817 634 ADLVVSLLPY 643 (1201)
Q Consensus 634 ~DVVIs~lP~ 643 (1201)
.|++||+...
T Consensus 80 iDiLVnnAg~ 89 (244)
T d1edoa_ 80 IDVVVNNAGI 89 (244)
T ss_dssp CSEEEECCCC
T ss_pred CCcccccccc
Confidence 7999999753
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=94.89 E-value=0.019 Score=59.06 Aligned_cols=77 Identities=17% Similarity=0.299 Sum_probs=57.1
Q ss_pred cCCCeEEEEcC-ch--hHHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHHcC-CeeEEEeecCCCCchHHHhh---c---
Q psy12817 563 EESRNVLLLGA-GY--VSRPLIEYLHRDENIHITLGSLLKEDI-DKVTNEFG-RVEATLIDVNNGGSDNLSGL---V--- 631 (1201)
Q Consensus 563 ~~mkKVLILGA-G~--VG~~va~~La~~~~~~VtVadR~~ekA-e~La~~~~-~v~~v~lDV~D~~~e~L~el---I--- 631 (1201)
.+.|+++|.|+ |. +|+.+++.|++. +.+|++.+|+.++. +++++.++ +...+.+|+.+ .+...++ +
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~-Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~--~~~~~~~~~~v~~~ 80 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN--EEHLASLAGRVTEA 80 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHc-CCEEEEEeCChHHHHHHHHHHcCCceeeEeeeccc--ccccccccchhhhc
Confidence 35689999994 64 999999999987 57899999988765 55666553 46778899997 5444333 2
Q ss_pred ----cCCcEEEEcCC
Q psy12817 632 ----RSADLVVSLLP 642 (1201)
Q Consensus 632 ----~~~DVVIs~lP 642 (1201)
...|++|++..
T Consensus 81 ~~~~~~ld~~i~~ag 95 (268)
T d2h7ma1 81 IGAGNKLDGVVHSIG 95 (268)
T ss_dssp HCTTCCEEEEEECCC
T ss_pred cccCCCcceeeeccc
Confidence 23589999874
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.88 E-value=0.047 Score=54.41 Aligned_cols=85 Identities=8% Similarity=0.102 Sum_probs=61.4
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
.+.-.+|.|+|.|++|+...+.++.+|. ++.+|+..... .++.. ..+
T Consensus 41 ~l~~~~vgiiG~G~IG~~va~~l~~fg~----------------~v~~~d~~~~~----------~~~~~------~~~- 87 (188)
T d1sc6a1 41 EARGKKLGIIGYGHIGTQLGILAESLGM----------------YVYFYDIENKL----------PLGNA------TQV- 87 (188)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC----------------EEEEECSSCCC----------CCTTC------EEC-
T ss_pred cccceEEEEeecccchhhhhhhcccccc----------------eEeeccccccc----------hhhhh------hhh-
Confidence 4667899999999999999999999983 45555532110 00100 011
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
. ..+++++.+|||+.++--.+.+-.||+++.++. ||++
T Consensus 88 ~-~l~ell~~sDii~i~~plt~~T~~li~~~~l~~-mk~~ 125 (188)
T d1sc6a1 88 Q-HLSDLLNMSDVVSLHVPENPSTKNMMGAKEISL-MKPG 125 (188)
T ss_dssp S-CHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHH-SCTT
T ss_pred h-hHHHHHhhccceeecccCCcchhhhccHHHHhh-CCCC
Confidence 1 123567789999999877788889999999999 9999
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.83 E-value=0.033 Score=54.96 Aligned_cols=68 Identities=9% Similarity=0.095 Sum_probs=52.5
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...|+|+|+|+|.+|+.+|+.+... +.+|+|+++++-++- .+...+... ..+++++..+|+||.++.
T Consensus 22 l~Gk~v~V~GyG~iG~g~A~~~rg~-G~~V~v~e~dp~~al--~A~~dG~~v----------~~~~~a~~~adivvtaTG 88 (163)
T d1li4a1 22 IAGKVAVVAGYGDVGKGCAQALRGF-GARVIITEIDPINAL--QAAMEGYEV----------TTMDEACQEGNIFVTTTG 88 (163)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHH--HHHHTTCEE----------CCHHHHTTTCSEEEECSS
T ss_pred ecCCEEEEeccccccHHHHHHHHhC-CCeeEeeecccchhH--HhhcCceEe----------eehhhhhhhccEEEecCC
Confidence 3468999999999999999999886 589999999986543 222323332 247788889999999986
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 89 n 89 (163)
T d1li4a1 89 C 89 (163)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.81 E-value=0.033 Score=51.76 Aligned_cols=101 Identities=16% Similarity=0.196 Sum_probs=73.1
Q ss_pred CeEEEEcC----chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 566 RNVLLLGA----GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 566 kKVLILGA----G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
|+|+|+|+ |..|..+.++|.+. +++|.-++.+.+. ..+... ..++.++=...|+|+.++
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~-g~~V~pVnP~~~~-------i~G~~~---------y~sl~~lp~~~D~vvi~v 64 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSK-GFEVLPVNPNYDE-------IEGLKC---------YRSVRELPKDVDVIVFVV 64 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTTCSE-------ETTEEC---------BSSGGGSCTTCCEEEECS
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHC-CCEEEEEcccccc-------ccCccc---------cccchhccccceEEEEEe
Confidence 68999993 78899999999886 4688877655322 113221 224555545789999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEe
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~ 686 (1201)
|......+++.|++.|...+-.. -..++ +.+.|+++|+.++.
T Consensus 65 p~~~~~~~l~~~~~~g~k~v~~~~g~~~~~---~~~~a~~~gi~vig 108 (116)
T d1y81a1 65 PPKVGLQVAKEAVEAGFKKLWFQPGAESEE---IRRFLEKAGVEYSF 108 (116)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTSCCHH---HHHHHHHHTCEEEC
T ss_pred CHHHHHHHHHHHHhcCCceEEeccchhhHH---HHHHHHHcCCEEEc
Confidence 99999999999999998865442 23444 45669999998864
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=94.81 E-value=0.024 Score=56.59 Aligned_cols=71 Identities=14% Similarity=0.135 Sum_probs=51.5
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
....++|+|+|+|.+|+.+++.|... +.+|...|+......... .. ++.. ...+.++++++|+|+.++
T Consensus 41 ~l~~~~vgiiG~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~-~~-~~~~---------~~~l~~~l~~sD~v~~~~ 108 (188)
T d2naca1 41 DLEAMHVGTVAAGRIGLAVLRRLAPF-DVHLHYTDRHRLPESVEK-EL-NLTW---------HATREDMYPVCDVVTLNC 108 (188)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGG-TCEEEEECSSCCCHHHHH-HH-TCEE---------CSSHHHHGGGCSEEEECS
T ss_pred eccccceeeccccccchhhhhhhhcc-CceEEEEeeccccccccc-cc-cccc---------cCCHHHHHHhccchhhcc
Confidence 45678999999999999999999765 578999988543222111 11 1221 346888999999999999
Q ss_pred CCc
Q psy12817 642 PYN 644 (1201)
Q Consensus 642 P~~ 644 (1201)
|..
T Consensus 109 plt 111 (188)
T d2naca1 109 PLH 111 (188)
T ss_dssp CCC
T ss_pred ccc
Confidence 853
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.76 E-value=0.039 Score=57.54 Aligned_cols=77 Identities=14% Similarity=0.177 Sum_probs=58.0
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLV----- 631 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI----- 631 (1201)
.+.|+++|.| ++.+|+.+++.|++. +.+|.+++|+.+++++++++. ..+.....|+.+ .+.....+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~-G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~ 88 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED--MTFAEQFVAQAGK 88 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhh--HHHHHHHHHHHHH
Confidence 4568999999 688999999999997 589999999999998887653 235556667765 44444332
Q ss_pred --cCCcEEEEcCC
Q psy12817 632 --RSADLVVSLLP 642 (1201)
Q Consensus 632 --~~~DVVIs~lP 642 (1201)
...|++++...
T Consensus 89 ~~g~~~~li~nag 101 (269)
T d1xu9a_ 89 LMGGLDMLILNHI 101 (269)
T ss_dssp HHTSCSEEEECCC
T ss_pred HhCCccccccccc
Confidence 35788888764
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.76 E-value=0.029 Score=54.45 Aligned_cols=76 Identities=12% Similarity=0.010 Sum_probs=54.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
....+|+|+|+|.+|..++..+... +.+|+++++++++.+.. .++ ++..+ +|..+ +.+..+......|+|++|+.
T Consensus 26 ~~g~~vlI~GaG~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~a-~~l-Ga~~~-i~~~~-~~~~~~~~~~~~d~vi~~~~ 100 (168)
T d1piwa2 26 GPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDA-MKM-GADHY-IATLE-EGDWGEKYFDTFDLIVVCAS 100 (168)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHH-HHH-TCSEE-EEGGG-TSCHHHHSCSCEEEEEECCS
T ss_pred CCCCEEEEECCCCcchhHHHHhhhc-cccccccccchhHHHHh-hcc-CCcEE-eeccc-hHHHHHhhhcccceEEEEec
Confidence 3467999999999999988877655 57899999998887754 445 34432 34433 23455566667899999975
Q ss_pred C
Q psy12817 643 Y 643 (1201)
Q Consensus 643 ~ 643 (1201)
.
T Consensus 101 ~ 101 (168)
T d1piwa2 101 S 101 (168)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.62 E-value=0.038 Score=52.95 Aligned_cols=103 Identities=17% Similarity=0.198 Sum_probs=75.8
Q ss_pred CCCeEEEEcC----chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 564 ESRNVLLLGA----GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGA----G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+.++|+|+|+ +..|..++++|.+. +++|..++...+ ...+... ...+.++-...|+|+-
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~-g~~v~pVnP~~~-------~i~G~~~---------~~sl~dlp~~iD~v~i 80 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEH-GYDVYPVNPKYE-------EVLGRKC---------YPSVLDIPDKIEVVDL 80 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTTCS-------EETTEEC---------BSSGGGCSSCCSEEEE
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHC-CCEEEEECCccc-------ccCCCcc---------cccccccCccceEEEE
Confidence 3589999994 78999999999986 568888876532 1213221 2245555557999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEe
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~ 686 (1201)
++|...-.++++.|++.|+..+-.. -.+++. .+.|+++|+.++.
T Consensus 81 ~vp~~~~~~~~~e~~~~g~k~v~~~~G~~~ee~---~~~a~~~gi~vig 126 (139)
T d2d59a1 81 FVKPKLTMEYVEQAIKKGAKVVWFQYNTYNREA---SKKADEAGLIIVA 126 (139)
T ss_dssp CSCHHHHHHHHHHHHHHTCSEEEECTTCCCHHH---HHHHHHTTCEEEE
T ss_pred EeCHHHHHHHHHHHHHhCCCEEEEeccccCHHH---HHHHHHCCCEEEc
Confidence 9999988999999999999877763 245544 4568999998763
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=94.61 E-value=0.038 Score=54.48 Aligned_cols=73 Identities=18% Similarity=0.271 Sum_probs=48.4
Q ss_pred CCCeEEEEcCchhHHH--HHHHHHhCCCC---eEEEEeCCHHHHHHHHHHc--------CCeeEEEeecCCCCchHHHhh
Q psy12817 564 ESRNVLLLGAGYVSRP--LIEYLHRDENI---HITLGSLLKEDIDKVTNEF--------GRVEATLIDVNNGGSDNLSGL 630 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~--va~~La~~~~~---~VtVadR~~ekAe~La~~~--------~~v~~v~lDV~D~~~e~L~el 630 (1201)
+..||.|||+|.+|.+ +...|.+.... +|++.|.++++++..+... ...+... ..+..+.
T Consensus 2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~ea 74 (167)
T d1u8xx1 2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-------TTDPEEA 74 (167)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-------ESCHHHH
T ss_pred CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-------cCChhhc
Confidence 4579999999998865 33444444443 7999999999887443221 1122111 2246778
Q ss_pred ccCCcEEEEcCCC
Q psy12817 631 VRSADLVVSLLPY 643 (1201)
Q Consensus 631 I~~~DVVIs~lP~ 643 (1201)
++++|+||++...
T Consensus 75 l~~AD~Vvitag~ 87 (167)
T d1u8xx1 75 FTDVDFVMAHIRV 87 (167)
T ss_dssp HSSCSEEEECCCT
T ss_pred cCCCCEEEECCCc
Confidence 8999999999853
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=94.53 E-value=0.04 Score=53.59 Aligned_cols=90 Identities=13% Similarity=0.118 Sum_probs=59.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHH---hhc--cCCcEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLS---GLV--RSADLVV 638 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~---elI--~~~DVVI 638 (1201)
....|+|+|+|.+|..++..+...+..+|+++++++++.+. +.++ +.... +|..+ ..+.+. +.. .++|+||
T Consensus 28 ~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~-a~~~-Ga~~~-i~~~~-~~~~~~~~~~~~~~~G~D~vi 103 (176)
T d2jhfa2 28 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAK-AKEV-GATEC-VNPQD-YKKPIQEVLTEMSNGGVDFSF 103 (176)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHT-TCSEE-ECGGG-CSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHH-HHHh-CCeeE-EecCC-chhHHHHHHHHHhcCCCCEEE
Confidence 45789999999999999999998877889999999999775 4444 33322 23322 112222 222 2589999
Q ss_pred EcCCCcccHHHHHHHHHcC
Q psy12817 639 SLLPYNLHHHVAEFCIQHG 657 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaG 657 (1201)
+++......+.+-.+++.+
T Consensus 104 d~~G~~~~~~~a~~~~~~~ 122 (176)
T d2jhfa2 104 EVIGRLDTMVTALSCCQEA 122 (176)
T ss_dssp ECSCCHHHHHHHHHHBCTT
T ss_pred ecCCchhHHHHHHHHHhcC
Confidence 9997654434333344443
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=94.43 E-value=0.051 Score=56.28 Aligned_cols=109 Identities=17% Similarity=0.216 Sum_probs=77.8
Q ss_pred cccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 561 QTEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 561 ~~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
++.+.++|+|-|.|.||+.++++|.+. +.+|+++|.+....+.+.... +...+ + .+++-+ .+||+++=|
T Consensus 35 ~~l~g~~v~IqG~GnVG~~~a~~L~~~-Gakvv~~d~~~~~~~~~~~~~-g~~~~-----~--~~~~~~--~~cDIl~Pc 103 (230)
T d1leha1 35 DSLEGLAVSVQGLGNVAKALCKKLNTE-GAKLVVTDVNKAAVSAAVAEE-GADAV-----A--PNAIYG--VTCDIFAPC 103 (230)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHH-CCEEC-----C--GGGTTT--CCCSEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEeecccHHHHHHHHHhc-CCccc-----C--Cccccc--ccccEeccc
Confidence 346789999999999999999999987 588999999999988877765 33321 2 222222 279999998
Q ss_pred C-CCcccHHHHHHHHHcCCeEEEccC----ChHHHHHHHHHHHHcCCEEEe
Q psy12817 641 L-PYNLHHHVAEFCIQHGKNLVTASY----LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 641 l-P~~~h~~VakacIeaGkh~VD~Sy----vs~e~~eLde~AkeAGVtil~ 686 (1201)
. ....+...+. +-++.+|...- .+++. ++..+++||.+++
T Consensus 104 A~~~~I~~~~~~---~l~ak~Ive~ANn~~t~~ea---~~~L~~rGI~~iP 148 (230)
T d1leha1 104 ALGAVLNDFTIP---QLKAKVIAGSADNQLKDPRH---GKYLHELGIVYAP 148 (230)
T ss_dssp SCSCCBSTTHHH---HCCCSEECCSCSCCBSSHHH---HHHHHHHTCEECC
T ss_pred ccccccChHHhh---ccCccEEEecccCCCCCchH---HHHHHhhCcEEEe
Confidence 6 6666655444 44566777642 33443 3446788999987
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=94.39 E-value=0.0068 Score=61.53 Aligned_cols=67 Identities=13% Similarity=0.133 Sum_probs=50.6
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
....++|+|+|+|.||+.+++.|... +.+|.++|+...+.. ..... ...++++++.+|+|+.++
T Consensus 42 ~l~~ktvgIiG~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~-----~~~~~----------~~~l~~l~~~~D~v~~~~ 105 (199)
T d1dxya1 42 ELGQQTVGVMGTGHIGQVAIKLFKGF-GAKVIAYDPYPMKGD-----HPDFD----------YVSLEDLFKQSDVIDLHV 105 (199)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCSSC-----CTTCE----------ECCHHHHHHHCSEEEECC
T ss_pred cccceeeeeeeccccccccccccccc-ceeeeccCCccchhh-----hcchh----------HHHHHHHHHhcccceeee
Confidence 34568999999999999999999875 588999998754311 11111 235788889999999999
Q ss_pred CCc
Q psy12817 642 PYN 644 (1201)
Q Consensus 642 P~~ 644 (1201)
|..
T Consensus 106 plt 108 (199)
T d1dxya1 106 PGI 108 (199)
T ss_dssp CCC
T ss_pred ccc
Confidence 864
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.25 E-value=0.051 Score=52.47 Aligned_cols=90 Identities=14% Similarity=0.091 Sum_probs=58.0
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-----cCCcEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-----RSADLVV 638 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-----~~~DVVI 638 (1201)
...+|+|+|+|.+|...+..+...+...|+++++++++.+ +++++ ++..+ +|..+ +.+.+.+.+ .++|+||
T Consensus 28 ~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l-Ga~~~-i~~~~-~~~~~~~~~~~~~~~g~D~vi 103 (176)
T d2fzwa2 28 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF-GATEC-INPQD-FSKPIQEVLIEMTDGGVDYSF 103 (176)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH-TCSEE-ECGGG-CSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh-CCcEE-EeCCc-hhhHHHHHHHHHcCCCCcEee
Confidence 3568999999999999999888776667888899988865 45566 33332 34332 122333332 3589999
Q ss_pred EcCCCcccHHHHHHHHHcC
Q psy12817 639 SLLPYNLHHHVAEFCIQHG 657 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaG 657 (1201)
+++......+.+..+++.|
T Consensus 104 d~~G~~~~~~~~~~~~~~g 122 (176)
T d2fzwa2 104 ECIGNVKVMRAALEACHKG 122 (176)
T ss_dssp ECSCCHHHHHHHHHTBCTT
T ss_pred ecCCCHHHHHHHHHhhcCC
Confidence 9997443333334444444
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=94.22 E-value=0.028 Score=54.73 Aligned_cols=96 Identities=9% Similarity=0.180 Sum_probs=60.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEcC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSLL 641 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~l 641 (1201)
....|+|+|+|.+|..++..+...+...|+++++++++.+.+. ++ +... .+|..+.+.+...+... +.|+||+|+
T Consensus 32 ~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~-ga~~-~i~~~~~~~~~~~~~~~~~g~d~vid~~ 108 (172)
T d1h2ba2 32 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-GADH-VVDARRDPVKQVMELTRGRGVNVAMDFV 108 (172)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-TCSE-EEETTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hc-ccce-eecCcccHHHHHHHhhCCCCceEEEEec
Confidence 3578999999999999999887776677889999998877654 44 2332 24544301222223222 489999999
Q ss_pred CCcccHHHHHHHHHcCCeEEE
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD 662 (1201)
+..-..+.+..+++.+-.++.
T Consensus 109 g~~~~~~~a~~~l~~~G~iv~ 129 (172)
T d1h2ba2 109 GSQATVDYTPYLLGRMGRLII 129 (172)
T ss_dssp CCHHHHHHGGGGEEEEEEEEE
T ss_pred CcchHHHHHHHHHhCCCEEEE
Confidence 754333333334444434443
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=94.20 E-value=0.096 Score=46.93 Aligned_cols=87 Identities=10% Similarity=0.166 Sum_probs=55.4
Q ss_pred cCCCeEEEEcCchhHH-HHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 563 EESRNVLLLGAGYVSR-PLIEYLHRDENIHITLGSLLKE-DIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~-~va~~La~~~~~~VtVadR~~e-kAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
..++||-+||.|.+|. ++|++|.++ +++|+..|+... ..+.+.+. +++... .. +++ .+++.|+||-.
T Consensus 6 ~~~~~ihfiGigG~GMs~LA~~L~~~-G~~VsGSD~~~~~~~~~L~~~--Gi~v~~---g~-~~~----~i~~~d~vV~S 74 (96)
T d1p3da1 6 RRVQQIHFIGIGGAGMSGIAEILLNE-GYQISGSDIADGVVTQRLAQA--GAKIYI---GH-AEE----HIEGASVVVVS 74 (96)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHH-TCEEEEEESCCSHHHHHHHHT--TCEEEE---SC-CGG----GGTTCSEEEEC
T ss_pred hhCCEEEEEEECHHHHHHHHHHHHhC-CCEEEEEeCCCChhhhHHHHC--CCeEEE---CC-ccc----cCCCCCEEEEC
Confidence 3579999999999995 558888876 689999998643 34555542 555332 11 122 34678988766
Q ss_pred CCC-cccHHHHHHHHHcCCeEE
Q psy12817 641 LPY-NLHHHVAEFCIQHGKNLV 661 (1201)
Q Consensus 641 lP~-~~h~~VakacIeaGkh~V 661 (1201)
... .-|+++ ++|.+.|..++
T Consensus 75 ~AI~~~npel-~~A~~~gipii 95 (96)
T d1p3da1 75 SAIKDDNPEL-VTSKQKRIPVI 95 (96)
T ss_dssp TTSCTTCHHH-HHHHHTTCCEE
T ss_pred CCcCCCCHHH-HHHHHcCCCEE
Confidence 432 336664 44667676654
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=94.15 E-value=0.017 Score=55.83 Aligned_cols=78 Identities=13% Similarity=0.020 Sum_probs=49.4
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCc--ccc-cccccCcccccc
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGG--YDY-QEYNENPSLYRS 272 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~--f~~-~ey~~~pe~y~s 272 (1201)
.||.|+|+|++|......+.+-|| .|.+|+......+.+... +.. +.. .+....+.. .+
T Consensus 2 k~iaIiGaG~~G~~~A~~l~~~G~----------------~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~ 63 (184)
T d1bg6a2 2 KTYAVLGLGNGGHAFAAYLALKGQ----------------SVLAWDIDAQRIKEIQDR-GAIIAEGPGLAGTAHPDL-LT 63 (184)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----------------EEEEECSCHHHHHHHHHH-TSEEEESSSCCEEECCSE-EE
T ss_pred CEEEEECccHHHHHHHHHHHHCCC----------------EEEEEECCHHHHHHHHHc-CCCchhhhhhhhhhhhhh-hh
Confidence 489999999999999999988885 478888766665555442 211 110 000111111 12
Q ss_pred hhhhhcCCcCcEEEEceec
Q psy12817 273 LFASKIAPYASIIINGIYW 291 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w 291 (1201)
...++.++.+|+||-|+-.
T Consensus 64 ~~~~e~~~~aD~iii~v~~ 82 (184)
T d1bg6a2 64 SDIGLAVKDADVILIVVPA 82 (184)
T ss_dssp SCHHHHHTTCSEEEECSCG
T ss_pred hhhHhHhcCCCEEEEEEch
Confidence 2235678899999998743
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=94.14 E-value=0.042 Score=57.15 Aligned_cols=79 Identities=11% Similarity=0.094 Sum_probs=53.8
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHH---HHHHHHHcC--CeeEEEeecCCCCchHHHhhc-----
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKED---IDKVTNEFG--RVEATLIDVNNGGSDNLSGLV----- 631 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ek---Ae~La~~~~--~v~~v~lDV~D~~~e~L~elI----- 631 (1201)
.+.|.|+|-| ++.+|+.+++.|++.+ .+|++.+|+.++ ++++....+ ++.+..+|+++ +.+.+++++
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G-~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRN-LKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV-PVAESKKLLKKIFD 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTC-CSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS-CHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCC-CHHHHHHHHHHHHH
Confidence 4578999999 6899999999999984 566555554333 333333343 46778889874 244454443
Q ss_pred --cCCcEEEEcCCC
Q psy12817 632 --RSADLVVSLLPY 643 (1201)
Q Consensus 632 --~~~DVVIs~lP~ 643 (1201)
...|++||+...
T Consensus 81 ~~g~iDilvnnAG~ 94 (254)
T d1sbya1 81 QLKTVDILINGAGI 94 (254)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEeCCCC
Confidence 358999999863
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=94.07 E-value=0.0095 Score=61.39 Aligned_cols=81 Identities=11% Similarity=0.133 Sum_probs=54.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC-----CCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD-----ENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVS 639 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~-----~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs 639 (1201)
+|||.|||+|..|++.+..|.+. .++.|+|+=|.-++..+.|..- +.+.. +.+ .-.+.++++.+|+|+.
T Consensus 44 ~KkIaViGYGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~d-Gf~v~--~~~---v~~v~EAv~~ADiVmi 117 (226)
T d1qmga2 44 IKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAA-GFSEE--NGT---LGDMWETISGSDLVLL 117 (226)
T ss_dssp CSEEEEECCSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHT-TCCGG--GTC---EEEHHHHHHTCSEEEE
T ss_pred CCEEEEEEeccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHc-CCccC--CCc---ccCHHHHHhhCCEEEE
Confidence 58999999999999999999874 4577888755432222222221 22210 100 1246778889999999
Q ss_pred cCCCcccHHHHH
Q psy12817 640 LLPYNLHHHVAE 651 (1201)
Q Consensus 640 ~lP~~~h~~Vak 651 (1201)
++|...+..+-+
T Consensus 118 LlPDe~Q~~vy~ 129 (226)
T d1qmga2 118 LISDSAQADNYE 129 (226)
T ss_dssp CSCHHHHHHHHH
T ss_pred ecchHHHHHHHH
Confidence 999888766654
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=94.07 E-value=0.0097 Score=58.35 Aligned_cols=71 Identities=15% Similarity=0.184 Sum_probs=46.8
Q ss_pred CeEEEEcCchhHHHHHHH-HHh-C---CCCeEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHhhccCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEY-LHR-D---ENIHITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~-La~-~---~~~~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
|||.|||+|.+|.+.+-. |++ . ...++.+.|.++++++...... ..... .++. ...+.++++|
T Consensus 1 mKIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~---~~t~----~~~~~l~~aD 73 (162)
T d1up7a1 1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV---LISD----TFEGAVVDAK 73 (162)
T ss_dssp CEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE---EECS----SHHHHHTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE---EEec----CcccccCCCC
Confidence 689999999988776633 332 2 2357999999999887544311 12221 2222 3456778999
Q ss_pred EEEEcCCC
Q psy12817 636 LVVSLLPY 643 (1201)
Q Consensus 636 VVIs~lP~ 643 (1201)
+||++...
T Consensus 74 vVVita~~ 81 (162)
T d1up7a1 74 YVIFQFRP 81 (162)
T ss_dssp EEEECCCT
T ss_pred EEEEeccc
Confidence 99999843
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.06 E-value=0.0057 Score=61.35 Aligned_cols=67 Identities=16% Similarity=0.196 Sum_probs=50.2
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
....++|+|+|+|.+|+.+++.+... +.+|...|+...... .... . .+.++++++++|+|+.++
T Consensus 41 ~l~~~~vgiiG~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~------~~~~----~-----~~~l~ell~~sDii~i~~ 104 (188)
T d1sc6a1 41 EARGKKLGIIGYGHIGTQLGILAESL-GMYVYFYDIENKLPL------GNAT----Q-----VQHLSDLLNMSDVVSLHV 104 (188)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCCCC------TTCE----E-----CSCHHHHHHHCSEEEECC
T ss_pred cccceEEEEeecccchhhhhhhcccc-cceEeeccccccchh------hhhh----h-----hhhHHHHHhhccceeecc
Confidence 35678999999999999999988765 688999998643211 0111 1 235888999999999999
Q ss_pred CCc
Q psy12817 642 PYN 644 (1201)
Q Consensus 642 P~~ 644 (1201)
|..
T Consensus 105 plt 107 (188)
T d1sc6a1 105 PEN 107 (188)
T ss_dssp CSS
T ss_pred cCC
Confidence 853
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=93.89 E-value=0.099 Score=51.00 Aligned_cols=93 Identities=22% Similarity=0.184 Sum_probs=51.7
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccC-cccccchh
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNEN-PSLYRSLF 274 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~-pe~y~s~f 274 (1201)
-+|+|+|+|.+|+.|+++++.+|++ ++.+.+....+.+.+++ .|.... .++.+. ........
T Consensus 30 ~~VlV~GaG~iG~~~~~~ak~~Ga~---------------~Vi~~~~~~~~~~~a~~-lGa~~v-i~~~~~~~~~~~~~i 92 (182)
T d1vj0a2 30 KTVVIQGAGPLGLFGVVIARSLGAE---------------NVIVIAGSPNRLKLAEE-IGADLT-LNRRETSVEERRKAI 92 (182)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBS---------------EEEEEESCHHHHHHHHH-TTCSEE-EETTTSCHHHHHHHH
T ss_pred CEEEEECCCccchhheecccccccc---------------ccccccccccccccccc-ccceEE-EeccccchHHHHHHH
Confidence 5799999999999999999999953 34455555555555543 564211 111111 11111111
Q ss_pred hhhc-CCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 275 ASKI-APYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 275 ~~~i-~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
.+.. -...|++|.|+.- |.. -++.-++++||
T Consensus 93 ~~~~~~~g~Dvvid~vG~----~~~--~~~a~~~l~~~ 124 (182)
T d1vj0a2 93 MDITHGRGADFILEATGD----SRA--LLEGSELLRRG 124 (182)
T ss_dssp HHHTTTSCEEEEEECSSC----TTH--HHHHHHHEEEE
T ss_pred HHhhCCCCceEEeecCCc----hhH--HHHHHHHhcCC
Confidence 1100 1237999999732 332 24433448888
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=93.75 E-value=0.08 Score=54.30 Aligned_cols=77 Identities=21% Similarity=0.297 Sum_probs=56.9
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHc----CCeeEEEeecCCCCchHHHhhccC---
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLK---EDIDKVTNEF----GRVEATLIDVNNGGSDNLSGLVRS--- 633 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~---ekAe~La~~~----~~v~~v~lDV~D~~~e~L~elI~~--- 633 (1201)
...|+|.| +|.+|+.+++.|++++.-+|++++|+. +.++++.+++ .++.++.+|++| .++++++++.
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d--~~~~~~~~~~i~~ 86 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD--RESVRELLGGIGD 86 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHTSCT
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccch--HHHHHHhhccccc
Confidence 46899999 799999999999988644688898864 3344443332 347788999998 7888777653
Q ss_pred ---CcEEEEcCCC
Q psy12817 634 ---ADLVVSLLPY 643 (1201)
Q Consensus 634 ---~DVVIs~lP~ 643 (1201)
.|.|+++...
T Consensus 87 ~~~i~~vv~~ag~ 99 (259)
T d2fr1a1 87 DVPLSAVFHAAAT 99 (259)
T ss_dssp TSCEEEEEECCCC
T ss_pred ccccccccccccc
Confidence 5778888753
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=93.75 E-value=0.13 Score=50.78 Aligned_cols=97 Identities=21% Similarity=0.152 Sum_probs=65.4
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---------C-Cee-----------EEEe-ecCCCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---------G-RVE-----------ATLI-DVNNGG 623 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---------~-~v~-----------~v~l-DV~D~~ 623 (1201)
+||+|=|.|++||.+.+.+.++++++|+..+-. ...+.++-.+ + .+. .+.+ .-.+
T Consensus 2 ikigINGFGRIGR~v~R~~~~~~~i~ivaINd~-~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~-- 78 (166)
T d1gado1 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD-- 78 (166)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS--
T ss_pred eEEEEECCcHHHHHHHHHHhhCCCeEEEEEeCC-CCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCC--
Confidence 589999999999999999999988997766533 3445554321 1 011 1111 1112
Q ss_pred chHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 624 SDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 624 ~e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
++++.=--.++|+||.|+..+...+-++.-++.|+.-|-.|.
T Consensus 79 p~~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSa 120 (166)
T d1gado1 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTG 120 (166)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESS
T ss_pred hHHCCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeec
Confidence 443321112799999999988888889999999988776664
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=93.66 E-value=0.043 Score=52.93 Aligned_cols=96 Identities=14% Similarity=0.183 Sum_probs=62.5
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-----cCCcEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-----RSADLV 637 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-----~~~DVV 637 (1201)
...+|+|+| +|.+|..++..+...+..+|++++++.++.+.+. ++ ++.. .+|..+ .+..++.. +..|+|
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~-Ga~~-~i~~~~--~~~~~~~~~~~~~~~~d~v 101 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-GADY-VINASM--QDPLAEIRRITESKGVDAV 101 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-TCSE-EEETTT--SCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-Hc-CCce-eeccCC--cCHHHHHHHHhhcccchhh
Confidence 457899999 5999999999888776678999999998877654 34 3332 345444 33333332 248999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEcc
Q psy12817 638 VSLLPYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 638 Is~lP~~~h~~VakacIeaGkh~VD~S 664 (1201)
++|++.....+.+-.+++.|-.++..+
T Consensus 102 id~~g~~~~~~~a~~~l~~~G~iv~~G 128 (170)
T d1jvba2 102 IDLNNSEKTLSVYPKALAKQGKYVMVG 128 (170)
T ss_dssp EESCCCHHHHTTGGGGEEEEEEEEECC
T ss_pred hcccccchHHHhhhhhcccCCEEEEec
Confidence 999874332233334445555555543
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.51 E-value=0.069 Score=51.24 Aligned_cols=77 Identities=9% Similarity=0.147 Sum_probs=50.3
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI~~~DVVIs~l 641 (1201)
....+|+|+|+|.+|..++..+... +.+|+++++++++.+. ++++ +... .+|..+.+ .+.+.+.-.+.|.+|.+.
T Consensus 26 ~~g~~VlV~GaG~vG~~~~~~ak~~-G~~Vi~~~~~~~~~~~-a~~~-Ga~~-~i~~~~~~~~~~~~~~~~g~~~~i~~~ 101 (166)
T d1llua2 26 RPGQWVAISGIGGLGHVAVQYARAM-GLHVAAIDIDDAKLEL-ARKL-GASL-TVNARQEDPVEAIQRDIGGAHGVLVTA 101 (166)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHH-HHHT-TCSE-EEETTTSCHHHHHHHHHSSEEEEEECC
T ss_pred CCCCEEEEeeccccHHHHHHHHHHc-CCccceecchhhHHHh-hhcc-Cccc-cccccchhHHHHHHHhhcCCccccccc
Confidence 3457899999999999998877766 4799999999998765 4455 3332 24555401 122333334566677766
Q ss_pred CC
Q psy12817 642 PY 643 (1201)
Q Consensus 642 P~ 643 (1201)
..
T Consensus 102 ~~ 103 (166)
T d1llua2 102 VS 103 (166)
T ss_dssp SC
T ss_pred cc
Confidence 43
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=93.44 E-value=0.11 Score=51.44 Aligned_cols=99 Identities=15% Similarity=0.029 Sum_probs=63.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeC---CHHHHHHHHHH------cC-Cee-----------EEE-eecCCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSL---LKEDIDKVTNE------FG-RVE-----------ATL-IDVNNG 622 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR---~~ekAe~La~~------~~-~v~-----------~v~-lDV~D~ 622 (1201)
+.||+|=|.|++||.+.+.+..+++++|+.++- +.+.+.-|.+. ++ .++ .+. ..-.+
T Consensus 1 kikIgINGFGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~- 79 (169)
T d1u8fo1 1 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD- 79 (169)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS-
T ss_pred CcEEEEECCcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCC-
Confidence 369999999999999999999888899766543 34444443321 11 011 111 11111
Q ss_pred CchHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 623 GSDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 623 ~~e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
++++.=--.++|+||.|+..+...+-++.-+++|+..|-.|.
T Consensus 80 -p~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSa 121 (169)
T d1u8fo1 80 -PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISA 121 (169)
T ss_dssp -GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESS
T ss_pred -hhhCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecc
Confidence 332221112699999999887778877777889998877764
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=93.42 E-value=0.19 Score=50.12 Aligned_cols=77 Identities=14% Similarity=0.139 Sum_probs=52.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI~--~~DVVIs~ 640 (1201)
...+|+|+|+|.+|..++..+...+..+|+++|+++++++. +.++ ++..+ .+-.+.+ .+.+.++.. ++|+||+|
T Consensus 25 ~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~-a~~~-Ga~~~-~~~~~~~~~~~i~~~t~g~g~D~vid~ 101 (195)
T d1kola2 25 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAH-AKAQ-GFEIA-DLSLDTPLHEQIAALLGEPEVDCAVDA 101 (195)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHT-TCEEE-ETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHh-hhhc-cccEE-EeCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence 34699999999999888888777666689999999998875 4555 44433 3333201 123333333 58999999
Q ss_pred CCC
Q psy12817 641 LPY 643 (1201)
Q Consensus 641 lP~ 643 (1201)
+..
T Consensus 102 vG~ 104 (195)
T d1kola2 102 VGF 104 (195)
T ss_dssp CCT
T ss_pred ccc
Confidence 863
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=93.41 E-value=0.099 Score=51.27 Aligned_cols=77 Identities=10% Similarity=0.082 Sum_probs=54.5
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC--chHHHhhc--cCCcEEEE
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG--SDNLSGLV--RSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~--~e~L~elI--~~~DVVIs 639 (1201)
....|+|+|+|.+|..++..+...+..+|+++|++.++.+ ++.++ ++.. .+|..+.+ .+.+.+.. .++|+||+
T Consensus 29 ~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~-~Ak~~-GA~~-~in~~~~~~~~~~~~~~~~g~G~d~vi~ 105 (176)
T d1d1ta2 29 PGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFE-KAMAV-GATE-CISPKDSTKPISEVLSEMTGNNVGYTFE 105 (176)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHH-TCSE-EECGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred CCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHH-HHHhc-CCcE-EECccccchHHHHHHHHhccccceEEEE
Confidence 3567999999999999999998887678999999999987 46666 3332 23433311 12233333 36999999
Q ss_pred cCCC
Q psy12817 640 LLPY 643 (1201)
Q Consensus 640 ~lP~ 643 (1201)
++..
T Consensus 106 ~~g~ 109 (176)
T d1d1ta2 106 VIGH 109 (176)
T ss_dssp CSCC
T ss_pred eCCc
Confidence 9864
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.36 E-value=0.1 Score=54.93 Aligned_cols=76 Identities=18% Similarity=0.260 Sum_probs=53.6
Q ss_pred CeEEEE-c-CchhHHHHHHHHHhCCC--CeEEEEeCCHHHHHHH---HHHc----CCeeEEEeecCCCCchHHHhhcc--
Q psy12817 566 RNVLLL-G-AGYVSRPLIEYLHRDEN--IHITLGSLLKEDIDKV---TNEF----GRVEATLIDVNNGGSDNLSGLVR-- 632 (1201)
Q Consensus 566 kKVLIL-G-AG~VG~~va~~La~~~~--~~VtVadR~~ekAe~L---a~~~----~~v~~v~lDV~D~~~e~L~elI~-- 632 (1201)
|||+|| | ++.+|+.+++.|++.+. +.|.+..|+.+..+++ ++.. .++..+.+|++| .+++.++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~ 79 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD--SKSVAAARERV 79 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC--HHHHHHHHHTC
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccc--hHhhhhhhhhc
Confidence 577666 8 78999999999998743 2355567766544333 3322 357889999998 788877664
Q ss_pred ---CCcEEEEcCCC
Q psy12817 633 ---SADLVVSLLPY 643 (1201)
Q Consensus 633 ---~~DVVIs~lP~ 643 (1201)
..|++||+...
T Consensus 80 ~~g~idilvnnag~ 93 (285)
T d1jtva_ 80 TEGRVDVLVCNAGL 93 (285)
T ss_dssp TTSCCSEEEECCCC
T ss_pred cccchhhhhhcccc
Confidence 37999998743
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=93.33 E-value=0.15 Score=49.58 Aligned_cols=67 Identities=25% Similarity=0.397 Sum_probs=48.4
Q ss_pred CeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchh
Q psy12817 195 PLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLF 274 (1201)
Q Consensus 195 P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f 274 (1201)
..+|+|+|+|-+|+.++..++.+|+. .+.|+.....+.+.+....+..+.. ..
T Consensus 17 ~~~vlIlGaGGaarai~~aL~~~g~~---------------~I~I~nR~~~ka~~L~~~~~~~~~~------------~~ 69 (167)
T d1npya1 17 NAKVIVHGSGGMAKAVVAAFKNSGFE---------------KLKIYARNVKTGQYLAALYGYAYIN------------SL 69 (167)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCC---------------CEEEECSCHHHHHHHHHHHTCEEES------------CC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCC---------------EEEEecccHHHHHHHHHhhhhhhhh------------cc
Confidence 56899999999999999999999853 5678877777766666654432211 00
Q ss_pred hhhcCCcCcEEEEceec
Q psy12817 275 ASKIAPYASIIINGIYW 291 (1201)
Q Consensus 275 ~~~i~p~~DvlIn~~~w 291 (1201)
....+|+||||.-.
T Consensus 70 ---~~~~~DliINaTpi 83 (167)
T d1npya1 70 ---ENQQADILVNVTSI 83 (167)
T ss_dssp ---TTCCCSEEEECSST
T ss_pred ---cccchhhheecccc
Confidence 12468999999765
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=93.22 E-value=0.26 Score=48.63 Aligned_cols=97 Identities=18% Similarity=0.108 Sum_probs=62.0
Q ss_pred CeEEEEcCchhHHHHHHHHHh---CCCCeEEEEeCCHHHHHHHHHH--c-------C-Ce-----------eEEE-eecC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHR---DENIHITLGSLLKEDIDKVTNE--F-------G-RV-----------EATL-IDVN 620 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~---~~~~~VtVadR~~ekAe~La~~--~-------~-~v-----------~~v~-lDV~ 620 (1201)
+||+|=|.|++||.+.+.+.+ +++++|+..+- ...++.++-. | + .+ ..+. ..-.
T Consensus 2 ikigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd-~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~ 80 (173)
T d1obfo1 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAIND-LGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR 80 (173)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEEC-SSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcC-CCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecC
Confidence 589999999999999999875 34567655542 1233433321 1 1 11 1111 1111
Q ss_pred CCCchHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 621 NGGSDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 621 D~~~e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
| ++++.=--.++|+||.|+..+...+-++.-+++|+..|-+|.
T Consensus 81 ~--p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSA 123 (173)
T d1obfo1 81 N--PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISA 123 (173)
T ss_dssp C--GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESS
T ss_pred C--HHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEec
Confidence 2 333322223789999999988888889999999998777764
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=93.21 E-value=0.17 Score=49.68 Aligned_cols=97 Identities=13% Similarity=0.090 Sum_probs=65.1
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEe-C--CHHHHHHHHHH------cC-Cee-----------EEEe-ecCCCCc
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGS-L--LKEDIDKVTNE------FG-RVE-----------ATLI-DVNNGGS 624 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVad-R--~~ekAe~La~~------~~-~v~-----------~v~l-DV~D~~~ 624 (1201)
||+|=|.|++||.+.+.+.++++++|+..+ . +.+.+.-|.+. ++ .++ .+.+ .-.| +
T Consensus 2 kigINGfGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~--p 79 (166)
T d2b4ro1 2 KLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD--P 79 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS--G
T ss_pred eEEEECCCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCC--h
Confidence 899999999999999999998888876654 2 44554444321 11 011 1111 1122 4
Q ss_pred hHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 625 e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+++.=--.++|+||.|+..+...+-++..+++|+..|-.|.
T Consensus 80 ~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSA 120 (166)
T d2b4ro1 80 SQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSA 120 (166)
T ss_dssp GGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESS
T ss_pred HHccccccCCCEEEEecccccchhhhhhhhccCCCEEEEec
Confidence 33221112899999999988888999999999998777664
|
| >d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
Probab=93.21 E-value=0.17 Score=50.02 Aligned_cols=98 Identities=16% Similarity=0.161 Sum_probs=65.0
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---------C-Cee-----------EEEeecCCCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---------G-RVE-----------ATLIDVNNGGS 624 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---------~-~v~-----------~v~lDV~D~~~ 624 (1201)
.||+|=|.|++||.+.+.+.++++++|+..+- ....+.++..+ + .++ .+.+--.. ++
T Consensus 2 ikIgINGfGRIGR~v~R~~l~~~~~~ivaINd-~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~-~p 79 (171)
T d3cmco1 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVND-LTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAER-DP 79 (171)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEEC-SSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCS-SG
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEcC-CCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecC-CH
Confidence 48999999999999999999998899776653 23455555321 1 111 11111111 23
Q ss_pred hHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 625 e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+++.=---++|+||.|+......+-++.-+++|+..|-.|.
T Consensus 80 ~~i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSa 120 (171)
T d3cmco1 80 ENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISA 120 (171)
T ss_dssp GGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESS
T ss_pred HHccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEec
Confidence 33221112799999999988888888888999998776664
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.18 E-value=0.077 Score=54.15 Aligned_cols=77 Identities=14% Similarity=0.137 Sum_probs=58.8
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhc-------c
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLV-------R 632 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI-------~ 632 (1201)
+.+.|.++|.| ++.+|+.+++.|++. +.+|++++|+.++++++++++. +......|+.+ .+..++.. .
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 78 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS--EKDVQTALALAKGKFG 78 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCCcccccccccc--cccccccccccccccc
Confidence 35678999999 689999999999997 5799999999999998888763 46677778776 44443332 2
Q ss_pred CCcEEEEcC
Q psy12817 633 SADLVVSLL 641 (1201)
Q Consensus 633 ~~DVVIs~l 641 (1201)
..|.+++..
T Consensus 79 ~~~~~~~~~ 87 (248)
T d2o23a1 79 RVDVAVNCA 87 (248)
T ss_dssp CCCEEEECC
T ss_pred ccccccccc
Confidence 467777664
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=92.78 E-value=0.12 Score=50.45 Aligned_cols=77 Identities=13% Similarity=0.061 Sum_probs=53.2
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhh---c--cCCcEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGL---V--RSADLV 637 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~el---I--~~~DVV 637 (1201)
....+|+|+|+|.+|..++..+...+..+|+++|++.++.+. +.++ ++..+ +|..+ ....+.+. . .+.|+|
T Consensus 26 ~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~-a~~l-Ga~~~-i~~~~-~d~~~~~~~~~~~~~G~d~v 101 (174)
T d1p0fa2 26 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPK-AIEL-GATEC-LNPKD-YDKPIYEVICEKTNGGVDYA 101 (174)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHT-TCSEE-ECGGG-CSSCHHHHHHHHTTSCBSEE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHH-HHHc-CCcEE-EcCCC-chhHHHHHHHHhcCCCCcEE
Confidence 345789999999999999999887766689999999988865 4556 44432 34433 11112222 2 258999
Q ss_pred EEcCCC
Q psy12817 638 VSLLPY 643 (1201)
Q Consensus 638 Is~lP~ 643 (1201)
|.++..
T Consensus 102 id~~g~ 107 (174)
T d1p0fa2 102 VECAGR 107 (174)
T ss_dssp EECSCC
T ss_pred EEcCCC
Confidence 999864
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=92.66 E-value=0.077 Score=50.36 Aligned_cols=104 Identities=18% Similarity=0.186 Sum_probs=73.5
Q ss_pred CCeEEEEcC----chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEc
Q psy12817 565 SRNVLLLGA----GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSL 640 (1201)
Q Consensus 565 mkKVLILGA----G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~ 640 (1201)
.++|+|+|+ +..|..++++|.+. ++.+..+..+... + ...+... ..++.++-...|+|+.+
T Consensus 13 pksIAVVGaS~~~~k~g~~v~~~L~~~-g~~~~~v~~~~~~-~----~i~g~~~---------~~~l~~i~~~iD~v~v~ 77 (136)
T d1iuka_ 13 AKTIAVLGAHKDPSRPAHYVPRYLREQ-GYRVLPVNPRFQG-E----ELFGEEA---------VASLLDLKEPVDILDVF 77 (136)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHT-TCEEEEECGGGTT-S----EETTEEC---------BSSGGGCCSCCSEEEEC
T ss_pred CCeEEEEeecCCCCCchHHHHHHHhcC-CCCceEEEecccc-c----eeeceec---------ccchhhccCCCceEEEe
Confidence 578999994 78999999999886 5788777654321 1 1112221 12344444568999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEe
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~ 686 (1201)
+|...-.++++.|++.|+..+-.. ...+ ++.+.|+++|+.++.
T Consensus 78 ~p~~~v~~~v~~~~~~g~k~i~~q~G~~~~---e~~~~a~~~Gi~vV~ 122 (136)
T d1iuka_ 78 RPPSALMDHLPEVLALRPGLVWLQSGIRHP---EFEKALKEAGIPVVA 122 (136)
T ss_dssp SCHHHHTTTHHHHHHHCCSCEEECTTCCCH---HHHHHHHHTTCCEEE
T ss_pred ccHHHHHHHHHHHHhhCCCeEEEecCccCH---HHHHHHHHcCCEEEc
Confidence 998888899999999998766553 3444 355669999998763
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.53 E-value=0.11 Score=59.65 Aligned_cols=98 Identities=14% Similarity=0.100 Sum_probs=61.0
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH-------------------HHHHHHHHc----CCeeEEEeec
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE-------------------DIDKVTNEF----GRVEATLIDV 619 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e-------------------kAe~La~~~----~~v~~v~lDV 619 (1201)
....+|+|+|+|.+|..+++.|+..+--+++++|.+.- +++.+++.+ |.+....++.
T Consensus 23 L~~s~VlvvG~gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~ 102 (529)
T d1yova1 23 LESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE 102 (529)
T ss_dssp HHHCEEEECCCSHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred HhCCCEEEECCCHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcC
Confidence 34579999999999999999999876557999876321 333333222 4433322221
Q ss_pred CCCCchHH----HhhccCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEc
Q psy12817 620 NNGGSDNL----SGLVRSADLVVSLLPY-NLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 620 ~D~~~e~L----~elI~~~DVVIs~lP~-~~h~~VakacIeaGkh~VD~ 663 (1201)
. .+.+ .+++++.|+||.|... .....+...|.+.++.++..
T Consensus 103 ~---~~~~~~~~~~~~~~~dvVv~~~~~~~~~~~l~~~c~~~~ip~i~~ 148 (529)
T d1yova1 103 S---PENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLIC 148 (529)
T ss_dssp C---HHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred C---chhhhhhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 1 2222 2556788999988742 23344666666666666654
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.43 E-value=0.23 Score=48.50 Aligned_cols=75 Identities=12% Similarity=0.112 Sum_probs=46.2
Q ss_pred CCeEEEEcCchhH--HHHHHHHHhCCC---CeEEEEeCCHHH--HHHHHH---H-c--CCeeEEEeecCCCCchHHHhhc
Q psy12817 565 SRNVLLLGAGYVS--RPLIEYLHRDEN---IHITLGSLLKED--IDKVTN---E-F--GRVEATLIDVNNGGSDNLSGLV 631 (1201)
Q Consensus 565 mkKVLILGAG~VG--~~va~~La~~~~---~~VtVadR~~ek--Ae~La~---~-~--~~v~~v~lDV~D~~~e~L~elI 631 (1201)
++||.|||+|.+| ..++..+...+. .++++.|.++++ ++.+-. . + .+........+ +..+.+
T Consensus 1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~t-----d~~~al 75 (169)
T d1s6ya1 1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTL-----DRRRAL 75 (169)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEES-----CHHHHH
T ss_pred CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecC-----Cchhhc
Confidence 4799999999766 445555555433 379999998754 443321 1 1 12222222223 356678
Q ss_pred cCCcEEEEcCCCc
Q psy12817 632 RSADLVVSLLPYN 644 (1201)
Q Consensus 632 ~~~DVVIs~lP~~ 644 (1201)
+++|+||++....
T Consensus 76 ~gaDvVv~ta~~~ 88 (169)
T d1s6ya1 76 DGADFVTTQFRVG 88 (169)
T ss_dssp TTCSEEEECCCTT
T ss_pred CCCCEEEEccccC
Confidence 8999999998654
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.43 E-value=0.15 Score=48.45 Aligned_cols=96 Identities=13% Similarity=0.139 Sum_probs=60.7
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI~~~DVVIs~lP 642 (1201)
...+|+|.|+|.+|..++..+... +.+|+++++++++.+.+ +.+ ++..+ .|..+.+ .+.+.+.-.+.|.+|.+.+
T Consensus 27 ~g~~vlv~G~G~iG~~a~~~a~~~-g~~v~~~~~~~~r~~~~-k~~-Ga~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~ 102 (168)
T d1rjwa2 27 PGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELA-KEL-GADLV-VNPLKEDAAKFMKEKVGGVHAAVVTAV 102 (168)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHH-HHT-TCSEE-ECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCCEEEEeecccchhhhhHHHhcC-CCeEeccCCCHHHhhhh-hhc-Cccee-cccccchhhhhcccccCCCceEEeecC
Confidence 457999999999999888877765 56899999999998755 445 44443 3443311 2234444456777777776
Q ss_pred CcccHHHHHHHHHcCCeEEEc
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~ 663 (1201)
.......+-.|++.+-.++..
T Consensus 103 ~~~~~~~a~~~l~~~G~i~~~ 123 (168)
T d1rjwa2 103 SKPAFQSAYNSIRRGGACVLV 123 (168)
T ss_dssp CHHHHHHHHHHEEEEEEEEEC
T ss_pred CHHHHHHHHHHhccCCceEec
Confidence 433334444444444444443
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=92.09 E-value=0.18 Score=48.16 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=43.8
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCC-eEEEEeCC--HHHHHHHHHHc------C-CeeEEEeecCCCCchHHHhhccCCc
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENI-HITLGSLL--KEDIDKVTNEF------G-RVEATLIDVNNGGSDNLSGLVRSAD 635 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~-~VtVadR~--~ekAe~La~~~------~-~v~~v~lDV~D~~~e~L~elI~~~D 635 (1201)
||.|+| +|.||..++..|..++-. ++.+.|.+ +++++..+..+ + ..+.. ..+ .+ .++++|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~---~~~--~~----~~~~aD 72 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR---QGG--YE----DTAGSD 72 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEE---ECC--GG----GGTTCS
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEe---eCC--HH----HhhhcC
Confidence 899999 799999999999877544 69999964 44444322221 1 22221 122 22 347999
Q ss_pred EEEEcCC
Q psy12817 636 LVVSLLP 642 (1201)
Q Consensus 636 VVIs~lP 642 (1201)
+||.+..
T Consensus 73 iVvitaG 79 (142)
T d1o6za1 73 VVVITAG 79 (142)
T ss_dssp EEEECCC
T ss_pred EEEEecc
Confidence 9999874
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.92 E-value=0.17 Score=53.90 Aligned_cols=76 Identities=22% Similarity=0.281 Sum_probs=55.1
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCC---------HHHHHHHHHHcC-CeeEEEeecCCCCchHHHhhcc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLL---------KEDIDKVTNEFG-RVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~---------~ekAe~La~~~~-~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
+.|.++|-| ++.+|+.+++.|++. +.+|++.||+ .+.++++.++.. .......|+.| .+..+++++
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~-Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~v~ 82 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAER-GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK 82 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch--HHHHHHHHH
Confidence 457888889 689999999999987 5789988654 456666665542 24456678887 555554443
Q ss_pred -------CCcEEEEcCC
Q psy12817 633 -------SADLVVSLLP 642 (1201)
Q Consensus 633 -------~~DVVIs~lP 642 (1201)
..|++||+..
T Consensus 83 ~~~~~~G~iDiLVnNAG 99 (302)
T d1gz6a_ 83 TALDTFGRIDVVVNNAG 99 (302)
T ss_dssp HHHHHTSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCc
Confidence 5899999975
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=91.91 E-value=0.24 Score=47.98 Aligned_cols=74 Identities=19% Similarity=0.134 Sum_probs=46.9
Q ss_pred CCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccch
Q psy12817 194 GPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSL 273 (1201)
Q Consensus 194 ~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~ 273 (1201)
.-.+|+|+|+|-+|+.++..+..+| ..+.|+.....+.+.+.......+ ......
T Consensus 17 ~~k~vlIlGaGGaarai~~al~~~g----------------~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~-------- 71 (170)
T d1nyta1 17 PGLRILLIGAGGASRGVLLPLLSLD----------------CAVTITNRTVSRAEELAKLFAHTG-SIQALS-------- 71 (170)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT----------------CEEEEECSSHHHHHHHHHHTGGGS-SEEECC--------
T ss_pred CCCEEEEECCcHHHHHHHHHhcccc----------------eEEEeccchHHHHHHHHHHHhhcc-cccccc--------
Confidence 3468999999999999999999988 345677766666665554332211 100000
Q ss_pred hhhhcCCcCcEEEEceecC
Q psy12817 274 FASKIAPYASIIINGIYWA 292 (1201)
Q Consensus 274 f~~~i~p~~DvlIn~~~w~ 292 (1201)
+.......+|+||||.-..
T Consensus 72 ~~~~~~~~~dliIN~Tp~G 90 (170)
T d1nyta1 72 MDELEGHEFDLIINATSSG 90 (170)
T ss_dssp SGGGTTCCCSEEEECCSCG
T ss_pred cccccccccceeecccccC
Confidence 0111234689999998654
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=91.84 E-value=0.26 Score=47.37 Aligned_cols=79 Identities=14% Similarity=0.180 Sum_probs=54.7
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC--chHHHhhc--cCCcEEE
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG--SDNLSGLV--RSADLVV 638 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~--~e~L~elI--~~~DVVI 638 (1201)
....+|+|+|+|.+|..++..+......+|++.++++++.+. +.++ ++.. .+|..+.+ .+...+.. .++|+|+
T Consensus 27 k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~-a~~~-GAd~-~in~~~~~~~~~~~~~~~~~~G~d~vi 103 (175)
T d1cdoa2 27 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK-AKVF-GATD-FVNPNDHSEPISQVLSKMTNGGVDFSL 103 (175)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHT-TCCE-EECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHH-HHHc-CCcE-EEcCCCcchhHHHHHHhhccCCcceee
Confidence 345789999999999999998888877789999999998875 4556 3332 33444301 12233332 3589999
Q ss_pred EcCCCc
Q psy12817 639 SLLPYN 644 (1201)
Q Consensus 639 s~lP~~ 644 (1201)
+++...
T Consensus 104 d~~G~~ 109 (175)
T d1cdoa2 104 ECVGNV 109 (175)
T ss_dssp ECSCCH
T ss_pred eecCCH
Confidence 999743
|
| >d1gr0a1 c.2.1.3 (A:14-200,A:312-367) Myo-inositol 1-phosphate synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Myo-inositol 1-phosphate synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.79 E-value=0.23 Score=51.25 Aligned_cols=60 Identities=18% Similarity=0.380 Sum_probs=44.6
Q ss_pred HHhhcc--CCcEEEEcCCCcc---cHHHHHHHHHcCCeEEEcc--CChHHHHHHHHHHHHcCCEEEec
Q psy12817 627 LSGLVR--SADLVVSLLPYNL---HHHVAEFCIQHGKNLVTAS--YLSPEMMALHERAASAGITVLNE 687 (1201)
Q Consensus 627 L~elI~--~~DVVIs~lP~~~---h~~VakacIeaGkh~VD~S--yvs~e~~eLde~AkeAGVtil~e 687 (1201)
+.+.++ ++|++||.+|..- ..-.+++|+++|+.+|..- ++... .++.++++++|+.++..
T Consensus 117 vv~~Lk~~~~dVlvnylPvGse~A~~~YA~~al~Ag~aFVN~iP~fIAsd-p~w~~kF~e~glpivGD 183 (243)
T d1gr0a1 117 VVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASD-PVWAKKFTDARVPIVGD 183 (243)
T ss_dssp HHHHHHHTTCSEEEECCCTTCHHHHHHHHHHHHHHTCEEEECSSCCSTTS-HHHHHHHHHHTCEEEES
T ss_pred HHHHHHhcCCCEEEEecCCCcHHHHHHHHHHHHHcCceEEecccccccCC-HHHHHHHHHcCCcEEcc
Confidence 444454 7999999999754 2457899999999999984 43221 24567899999999853
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=91.72 E-value=0.099 Score=50.23 Aligned_cols=72 Identities=19% Similarity=0.199 Sum_probs=45.0
Q ss_pred CeEEEEc-CchhHHHHHHHHHh-CC-CCeEEEEeCCHHHHHHHHHHcCC----eeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 566 RNVLLLG-AGYVSRPLIEYLHR-DE-NIHITLGSLLKEDIDKVTNEFGR----VEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 566 kKVLILG-AG~VG~~va~~La~-~~-~~~VtVadR~~ekAe~La~~~~~----v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
|||.|+| +|.||..++-.|.. .+ ..++.+.|..+ .++..+-.+.+ ...... .. .... +.++++|+||
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~--~~--~~~~-~~~~~aDvvv 74 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF--SG--EDAT-PALEGADVVL 74 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE--CS--SCCH-HHHTTCSEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE--Ec--CCCc-cccCCCCEEE
Confidence 6999999 69999999987754 33 34799999864 34433333211 111111 11 1223 3568999999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
.+...
T Consensus 75 itaG~ 79 (145)
T d2cmda1 75 ISAGV 79 (145)
T ss_dssp ECCSC
T ss_pred ECCCc
Confidence 99853
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=91.71 E-value=0.25 Score=48.63 Aligned_cols=90 Identities=10% Similarity=0.035 Sum_probs=59.4
Q ss_pred ccCCeEEEEEc-CcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCc----ccccccccC
Q psy12817 192 SIGPLTIVFTG-SGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGG----YDYQEYNEN 266 (1201)
Q Consensus 192 ~i~P~~vvv~G-~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~----f~~~ey~~~ 266 (1201)
++.-.+++||| +|-+|+...+.+.+.| +++.+.+....+.+.+....... +...|. .+
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G----------------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~-~~ 82 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEG----------------AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET-AD 82 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT----------------CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEEC-CS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhc----------------cchhhcccchHHHHHHHHHHHhccchhhhhhhc-cc
Confidence 66778999999 6999999999998877 55667776666655544432211 111110 11
Q ss_pred cccccchhhhhcCCcCcEEEEceecCCCCCcccCHHHHhc
Q psy12817 267 PSLYRSLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKN 306 (1201)
Q Consensus 267 pe~y~s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~ 306 (1201)
+ ...++.+..+|+|||++.. .+.+++.|+++.
T Consensus 83 ~-----~~~~~~~~~iDilin~Ag~---g~~~~~~e~~~~ 114 (191)
T d1luaa1 83 D-----ASRAEAVKGAHFVFTAGAI---GLELLPQAAWQN 114 (191)
T ss_dssp H-----HHHHHHTTTCSEEEECCCT---TCCCBCHHHHHT
T ss_pred H-----HHHHHHhcCcCeeeecCcc---ccccCCHHHHHh
Confidence 1 1124556789999999864 356889999887
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=91.63 E-value=0.1 Score=51.29 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=24.1
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYE 220 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~ 220 (1201)
+...+|+|+|+|-+|+.++..+..+|+.
T Consensus 16 l~~k~vlIlGaGGaarai~~al~~~g~~ 43 (182)
T d1vi2a1 16 IKGKTMVLLGAGGASTAIGAQGAIEGLK 43 (182)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCS
T ss_pred cCCCEEEEECCcHHHHHHHHHHhhcCCc
Confidence 4457999999999999999999888853
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.58 E-value=0.081 Score=56.57 Aligned_cols=115 Identities=13% Similarity=0.226 Sum_probs=73.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEe----------CCHHHHHHHHHHcCCeeEE-EeecCCCCchHHHh
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGS----------LLKEDIDKVTNEFGRVEAT-LIDVNNGGSDNLSG 629 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~V-tVad----------R~~ekAe~La~~~~~v~~v-~lDV~D~~~e~L~e 629 (1201)
+.+.++|+|=|.|.||+.++++|.+.+ .+| +|.| .+.+++.+.......+... ...+.+ +.+-+
T Consensus 33 ~L~gktvaIqGfGnVG~~~A~~L~e~G-akvv~vsD~~G~i~~~~Gld~~~L~~~~~~~~~~~~~~~~~~~~---~~~~~ 108 (293)
T d1hwxa1 33 GFGDKTFAVQGFGNVGLHSMRYLHRFG-AKCVAVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE---GSILE 108 (293)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEEETTEEECCTTCCCHHHHHHHHHTTSSSTTCTTSCBCC---SCGGG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEEccchhhccccccchHHHHHHHHHcCCeecccccccCC---ccccc
Confidence 356789999999999999999999874 664 4544 4666776665543221100 001111 12211
Q ss_pred hccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEecc
Q psy12817 630 LVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEV 688 (1201)
Q Consensus 630 lI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~ 688 (1201)
.+||++|=|. ....+..-+. +.++.+|... .++++. ++..+++||.++|+.
T Consensus 109 --~~~DIliPaA~~~~I~~~~a~---~l~ak~I~EgAN~P~t~eA---~~~L~~~gI~viPD~ 163 (293)
T d1hwxa1 109 --VDCDILIPAASEKQLTKSNAP---RVKAKIIAEGANGPTTPQA---DKIFLERNIMVIPDL 163 (293)
T ss_dssp --CCCSEEEECSSSSCBCTTTGG---GCCCSEEECCSSSCBCHHH---HHHHHHTTCEEECHH
T ss_pred --CCccEEeeccccccccHHHHH---HHhhCEEeccCCCCCCcch---HHHHHHCCCEEeChh
Confidence 3899999886 6666655444 4477788875 455554 345788999999843
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.53 E-value=0.1 Score=49.49 Aligned_cols=35 Identities=26% Similarity=0.267 Sum_probs=30.4
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL 598 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~ 598 (1201)
.+.++|+|+|+|.+|..-++.|.+. +.+|+|++..
T Consensus 11 l~gkrvLViGgG~va~~ka~~Ll~~-GA~VtVvap~ 45 (150)
T d1kyqa1 11 LKDKRILLIGGGEVGLTRLYKLMPT-GCKLTLVSPD 45 (150)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGG-TCEEEEEEEE
T ss_pred eCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 5679999999999999999999987 5789988654
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=91.48 E-value=0.19 Score=48.10 Aligned_cols=93 Identities=16% Similarity=0.087 Sum_probs=54.4
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCc--ccccccccCcccccch
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGG--YDYQEYNENPSLYRSL 273 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~--f~~~ey~~~pe~y~s~ 273 (1201)
-+|+|+|+|.+|+-++++++.+| +++.+.+....+.+..++ .|.. +........+......
T Consensus 28 ~~vlV~G~G~vG~~~~~~ak~~G----------------a~vi~v~~~~~r~~~a~~-~ga~~~~~~~~~~~~~~~~~~~ 90 (170)
T d1e3ja2 28 TTVLVIGAGPIGLVSVLAAKAYG----------------AFVVCTARSPRRLEVAKN-CGADVTLVVDPAKEEESSIIER 90 (170)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT----------------CEEEEEESCHHHHHHHHH-TTCSEEEECCTTTSCHHHHHHH
T ss_pred CEEEEEcccccchhhHhhHhhhc----------------ccccccchHHHHHHHHHH-cCCcEEEeccccccccchhhhh
Confidence 47899999999999999999998 455666666666655544 5542 1111111111122222
Q ss_pred hhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 274 FASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 274 f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
..+..-...|++|.|+-- |. +.++.-++++|+
T Consensus 91 ~~~~~g~g~D~vid~~g~----~~--~~~~a~~~~~~~ 122 (170)
T d1e3ja2 91 IRSAIGDLPNVTIDCSGN----EK--CITIGINITRTG 122 (170)
T ss_dssp HHHHSSSCCSEEEECSCC----HH--HHHHHHHHSCTT
T ss_pred hhcccccCCceeeecCCC----hH--HHHHHHHHHhcC
Confidence 222223468999999743 22 233333447888
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=91.39 E-value=0.5 Score=47.53 Aligned_cols=80 Identities=14% Similarity=0.118 Sum_probs=55.4
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCccccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYR 271 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~ 271 (1201)
++.-.+|+|-|.|+||..+.+.+.++| +++.++|......++... .|..+-. + .
T Consensus 24 ~L~gk~v~IqG~G~VG~~~A~~L~~~G----------------akvvv~d~d~~~~~~~~~-~g~~~~~------~---~ 77 (201)
T d1c1da1 24 SLDGLTVLVQGLGAVGGSLASLAAEAG----------------AQLLVADTDTERVAHAVA-LGHTAVA------L---E 77 (201)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTT----------------CEEEEECSCHHHHHHHHH-TTCEECC------G---G
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC----------------CEEEEecchHHHHHHHHh-hcccccC------c---c
Confidence 456689999999999999999999998 445666666655555443 3322111 1 1
Q ss_pred chhhhhcCCcCcEEEEceecCCCCCcccCHHHHhc
Q psy12817 272 SLFASKIAPYASIIINGIYWAVGSPKLLTLPDAKN 306 (1201)
Q Consensus 272 s~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~ 306 (1201)
+.| --.+||+|-|+. .-.||.+.+++
T Consensus 78 ~~~----~~~~DI~iPcA~-----~~~I~~~~a~~ 103 (201)
T d1c1da1 78 DVL----STPCDVFAPCAM-----GGVITTEVART 103 (201)
T ss_dssp GGG----GCCCSEEEECSC-----SCCBCHHHHHH
T ss_pred ccc----cccceeeecccc-----cccccHHHHhh
Confidence 112 226999998874 45899999999
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.14 E-value=0.16 Score=49.01 Aligned_cols=95 Identities=15% Similarity=0.130 Sum_probs=60.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhc--cCCcEEEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLV--RSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI--~~~DVVIs 639 (1201)
+..+|+|.| +|.+|..+++.+... +.++.+++++.++.+.+. ++ ++.. .+|..+.+ .+.+.+.. +++|+|++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~-g~~vi~~~~~~~~~~~l~-~~-Ga~~-vi~~~~~~~~~~v~~~t~~~g~d~v~d 100 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLS-RL-GVEY-VGDSRSVDFADEILELTDGYGVDVVLN 100 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHH-TT-CCSE-EEETTCSTHHHHHHHHTTTCCEEEEEE
T ss_pred CCCEEEEECCCCCcccccchhhccc-cccceeeecccccccccc-cc-cccc-cccCCccCHHHHHHHHhCCCCEEEEEe
Confidence 347899999 699999999977655 578888888888876554 44 3443 34555401 12233332 35899999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEc
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD~ 663 (1201)
++... +...+-.|++.+-++++.
T Consensus 101 ~~g~~-~~~~~~~~l~~~G~~v~~ 123 (183)
T d1pqwa_ 101 SLAGE-AIQRGVQILAPGGRFIEL 123 (183)
T ss_dssp CCCTH-HHHHHHHTEEEEEEEEEC
T ss_pred cccch-HHHHHHHHhcCCCEEEEE
Confidence 99743 333344555555556654
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=91.11 E-value=0.25 Score=50.94 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=71.5
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeE-EEEe----------CCHHHHHHHHHHc------CCeeEEEeecCCCCc
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHI-TLGS----------LLKEDIDKVTNEF------GRVEATLIDVNNGGS 624 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~V-tVad----------R~~ekAe~La~~~------~~v~~v~lDV~D~~~ 624 (1201)
+.+.++|+|=|.|.||+.++++|.+..+.+| ++.| .+.+.+.++.... ++.+.+ + .
T Consensus 28 ~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~-----~--~ 100 (234)
T d1b26a1 28 DPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERI-----T--N 100 (234)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEETTEEEECTTCCCHHHHHHHHHHSSCSTTCSSCEEE-----C--H
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeecCCCcEEeccccchHHHHHHHHhhcceeccccceee-----c--c
Confidence 3567999999999999999999975434554 4444 3455555555433 122211 1 2
Q ss_pred hHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEecc
Q psy12817 625 DNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEV 688 (1201)
Q Consensus 625 e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~ 688 (1201)
+++-+ .+||+++=|. +...+..-+. +-++.+|... .++++. ++.-+++||.++++.
T Consensus 101 ~~~~~--~~~DI~~PcA~~~~I~~~~a~---~l~~~~I~e~AN~p~t~~a---~~~L~~rgI~~~PD~ 160 (234)
T d1b26a1 101 EELLE--LDVDILVPAALEGAIHAGNAE---RIKAKAVVEGANGPTTPEA---DEILSRRGILVVPDI 160 (234)
T ss_dssp HHHHT--SCCSEEEECSCTTCBCHHHHT---TCCCSEEECCSSSCBCHHH---HHHHHHTTCEEECHH
T ss_pred ccccc--cccceeecchhcccccHHHHH---HhhhceEeecCCCCCCHHH---HHHHHHCCeEEechH
Confidence 22322 2899999886 6677766554 3456778774 455554 344678999999843
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=91.09 E-value=0.1 Score=47.96 Aligned_cols=66 Identities=18% Similarity=0.299 Sum_probs=48.6
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEE
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKED-IDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVV 638 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ek-Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVI 638 (1201)
..||+|||+|..|+.++....+. ++++.+.|.+++. |..++ -..+..|..| .+.+.+++. ++|+|.
T Consensus 11 ~~kigIlGgGQL~rMla~aA~~l-G~~v~v~d~~~~~PA~~va-----~~~i~~~~~d--~~~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 11 ATRVMLLGSGELGKEVAIECQRL-GVEVIAVDRYADAPAMHVA-----HRSHVINMLD--GDALRRVVELEKPHYIV 79 (111)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTT-TCEEEEEESSTTCGGGGGS-----SEEEECCTTC--HHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHC-CCEEEEEcCCCCCchhhcC-----CeEEECCCCC--HHHHHHHHHhhCCceEE
Confidence 46999999999999999987776 6899999988663 22222 2345667777 778877764 468773
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=90.93 E-value=0.59 Score=45.93 Aligned_cols=98 Identities=19% Similarity=0.184 Sum_probs=61.2
Q ss_pred eEEEEcCchhHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHc---------C-CeeE----E-----EeecCC-CCc
Q psy12817 567 NVLLLGAGYVSRPLIEYLHR--DENIHITLGSLLKEDIDKVTNEF---------G-RVEA----T-----LIDVNN-GGS 624 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~--~~~~~VtVadR~~ekAe~La~~~---------~-~v~~----v-----~lDV~D-~~~ 624 (1201)
||+|=|.|++||.+.+.+.+ .++++|+..+-. ..++.++-.+ + .++. . .+.+.. .++
T Consensus 2 kIgINGfGRIGR~v~R~~~~~~~~~i~vvaINd~-~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p 80 (169)
T d1hdgo1 2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred EEEEECCChHHHHHHHHHHhccCCCEEEEEeccC-ccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence 89999999999999999875 456776554422 2444444321 1 1111 0 011111 013
Q ss_pred hHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 625 e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+++.=--.++|+||.|+..+...+-++.-+++|+..|-.|.
T Consensus 81 ~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSA 121 (169)
T d1hdgo1 81 SKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITA 121 (169)
T ss_dssp GGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESS
T ss_pred hhCCccccCCCEEEEecceeccccchhhhccCCCceEEEec
Confidence 33321112799999999988888888989999987776654
|
| >d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=90.93 E-value=0.51 Score=46.48 Aligned_cols=95 Identities=17% Similarity=0.209 Sum_probs=60.0
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCC--CeEEEEeCCHHHHHHHHHH--cC--------Ce------------eEEEe-ecC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDEN--IHITLGSLLKEDIDKVTNE--FG--------RV------------EATLI-DVN 620 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~--~~VtVadR~~ekAe~La~~--~~--------~v------------~~v~l-DV~ 620 (1201)
+||+|=|.|++||.+.+.+..+.+ ++|+.++-. ..++.++-. |. .+ ..+.+ .-.
T Consensus 1 ikIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~-~~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~ 79 (172)
T d1rm4a1 1 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 79 (172)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEEcCC-CCHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCC
Confidence 589999999999999998876544 665544432 345555531 11 01 11111 111
Q ss_pred CCCchHH--HhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 621 NGGSDNL--SGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 621 D~~~e~L--~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
| ++++ .+ .++|+||.|+..+...+-++.-+++|+..|-.|.
T Consensus 80 ~--p~~i~W~~--~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSA 122 (172)
T d1rm4a1 80 N--PVNLPWGD--MGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITA 122 (172)
T ss_dssp C--GGGSCHHH--HTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESS
T ss_pred C--hHHCChhh--cCCCEEEecCceEccHHHHHHHHhcCCceEEeec
Confidence 2 3332 22 2799999999988888888888888987665553
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=90.92 E-value=0.15 Score=54.41 Aligned_cols=41 Identities=20% Similarity=0.232 Sum_probs=34.1
Q ss_pred CCCCccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccch
Q psy12817 188 NMPKSIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQ 228 (1201)
Q Consensus 188 g~p~~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr 228 (1201)
|+.+++...+|+|-|.||||..|.+.+.++|++.|...|-.
T Consensus 29 gl~~~L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD~~ 69 (293)
T d1hwxa1 29 GMTPGFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGESD 69 (293)
T ss_dssp TCCSSSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred cCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEccc
Confidence 34345778999999999999999999999999877666643
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=90.88 E-value=0.25 Score=50.30 Aligned_cols=78 Identities=12% Similarity=0.215 Sum_probs=54.5
Q ss_pred cCCCeEEEEcC-c--hhHHHHHHHHHhCCCCeEEEEeCCHHHH---HHHHHHcCCeeEEEeecCCCCchHHHhhc-----
Q psy12817 563 EESRNVLLLGA-G--YVSRPLIEYLHRDENIHITLGSLLKEDI---DKVTNEFGRVEATLIDVNNGGSDNLSGLV----- 631 (1201)
Q Consensus 563 ~~mkKVLILGA-G--~VG~~va~~La~~~~~~VtVadR~~ekA---e~La~~~~~v~~v~lDV~D~~~e~L~elI----- 631 (1201)
.+.|+|+|.|+ | .+|+.+++.|++. +.+|++.+|+.+.. +++............|+.+ ..+..+.+
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~-G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 79 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAE--DASIDTMFAELGK 79 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccch--HHHHHHHHHHhhh
Confidence 35689999994 5 6899999999986 58899999985533 3333444456777788776 55544433
Q ss_pred --cCCcEEEEcCCC
Q psy12817 632 --RSADLVVSLLPY 643 (1201)
Q Consensus 632 --~~~DVVIs~lP~ 643 (1201)
...|++|++...
T Consensus 80 ~~~~~d~~v~~a~~ 93 (258)
T d1qsga_ 80 VWPKFDGFVHSIGF 93 (258)
T ss_dssp TCSSEEEEEECCCC
T ss_pred cccccceEEEeecc
Confidence 246888888643
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=90.72 E-value=0.4 Score=42.27 Aligned_cols=83 Identities=7% Similarity=0.045 Sum_probs=51.7
Q ss_pred CeEEEEcCchhHH-HHHHHHHhCCCCeEEEEeCCHHH-HHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCCC
Q psy12817 566 RNVLLLGAGYVSR-PLIEYLHRDENIHITLGSLLKED-IDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLPY 643 (1201)
Q Consensus 566 kKVLILGAG~VG~-~va~~La~~~~~~VtVadR~~ek-Ae~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP~ 643 (1201)
|||-++|-|.+|. ++|+.|.+. +++|+..|+.... .++|.+ . +++... . .+ .+ -++++|+||-....
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~-G~~VsGSD~~~~~~t~~L~~-~-Gi~i~~-g-h~--~~----~i~~~d~vV~SsAI 70 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSN-GNDVYGSNIEETERTAYLRK-L-GIPIFV-P-HS--AD----NWYDPDLVIKTPAV 70 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHH-T-TCCEES-S-CC--TT----SCCCCSEEEECTTC
T ss_pred cEEEEEeECHHHHHHHHHHHHhC-CCeEEEEeCCCChhHHHHHH-C-CCeEEe-e-ec--cc----ccCCCCEEEEecCc
Confidence 7899999888887 566777665 6899999988643 344443 2 555321 1 11 22 24678988776533
Q ss_pred c-ccHHHHHHHHHcCCeE
Q psy12817 644 N-LHHHVAEFCIQHGKNL 660 (1201)
Q Consensus 644 ~-~h~~VakacIeaGkh~ 660 (1201)
. -|++ .++|.+.|.++
T Consensus 71 ~~~npe-l~~A~~~gIpv 87 (89)
T d1j6ua1 71 RDDNPE-IVRARMERVPI 87 (89)
T ss_dssp CTTCHH-HHHHHHTTCCE
T ss_pred CCCCHH-HHHHHHcCCCc
Confidence 3 3444 55556666554
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=90.69 E-value=0.22 Score=47.78 Aligned_cols=74 Identities=15% Similarity=0.128 Sum_probs=47.5
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCCC--------eEEEEeCCHHHHHHHHHHc-----CCeeEEEeecCCCCchHHHh
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDENI--------HITLGSLLKEDIDKVTNEF-----GRVEATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~~--------~VtVadR~~ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~e 629 (1201)
+.+||.|+|| |.||+.++..|+..+-+ ++...+++.++++.++... +....+.. . ....+
T Consensus 3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~ 76 (154)
T d1y7ta1 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEA--T----DDPKV 76 (154)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--E----SCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccccccccccc--C----Cchhh
Confidence 3569999996 99999999999865321 2333455666666554332 12333322 2 23456
Q ss_pred hccCCcEEEEcCCC
Q psy12817 630 LVRSADLVVSLLPY 643 (1201)
Q Consensus 630 lI~~~DVVIs~lP~ 643 (1201)
.++++|+||.+...
T Consensus 77 ~~~~advViitaG~ 90 (154)
T d1y7ta1 77 AFKDADYALLVGAA 90 (154)
T ss_dssp HTTTCSEEEECCCC
T ss_pred hcccccEEEeecCc
Confidence 77899999999843
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.68 E-value=0.3 Score=47.06 Aligned_cols=93 Identities=14% Similarity=0.179 Sum_probs=58.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCch---HHHhhcc--CCcEE
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSD---NLSGLVR--SADLV 637 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e---~L~elI~--~~DVV 637 (1201)
+..+|+|.| +|.+|..+++.+... +.+|++.++++++.+.+ .++ ++.. .+|..+ .+ .+.+... ..|+|
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~-G~~vi~~~~~~~~~~~~-~~~-Ga~~-vi~~~~--~~~~~~i~~~t~~~g~d~v 101 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIV-LQN-GAHE-VFNHRE--VNYIDKIKKYVGEKGIDII 101 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHH-HHT-TCSE-EEETTS--TTHHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEecccccccccccccccc-Ccccccccccccccccc-ccc-Cccc-cccccc--ccHHHHhhhhhccCCceEE
Confidence 456899999 599999999877665 57888888888876654 455 3443 346655 32 2223322 48999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEc
Q psy12817 638 VSLLPYNLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 638 Is~lP~~~h~~VakacIeaGkh~VD~ 663 (1201)
++++... +.+-+-.|++.+-.++..
T Consensus 102 ~d~~g~~-~~~~~~~~l~~~G~iv~~ 126 (174)
T d1yb5a2 102 IEMLANV-NLSKDLSLLSHGGRVIVV 126 (174)
T ss_dssp EESCHHH-HHHHHHHHEEEEEEEEEC
T ss_pred eecccHH-HHHHHHhccCCCCEEEEE
Confidence 9998532 233333444544455543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.64 E-value=0.24 Score=47.69 Aligned_cols=94 Identities=10% Similarity=0.065 Sum_probs=56.2
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhh
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFA 275 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~ 275 (1201)
-+|+|+|+|.+|+-|+++++.+|+. ++.+.+....+.+..+ +.|..+.-..-.+++......+.
T Consensus 28 d~VlI~G~G~iG~~~~~~a~~~G~~---------------~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~~~~~~~~~~~~ 91 (171)
T d1pl8a2 28 HKVLVCGAGPIGMVTLLVAKAMGAA---------------QVVVTDLSATRLSKAK-EIGADLVLQISKESPQEIARKVE 91 (171)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS---------------EEEEEESCHHHHHHHH-HTTCSEEEECSSCCHHHHHHHHH
T ss_pred CEEEEECCCccHHHHHHHHHHcCCc---------------eEEeccCCHHHHHHHH-HhCCccccccccccccccccccc
Confidence 3689999999999999999999953 3455566655555444 46643221111122222222222
Q ss_pred hhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 276 SKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 276 ~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
...-..+|++|.|.-- |. +.++.-+++++|
T Consensus 92 ~~~g~g~Dvvid~~G~----~~--~~~~a~~~~~~g 121 (171)
T d1pl8a2 92 GQLGCKPEVTIECTGA----EA--SIQAGIYATRSG 121 (171)
T ss_dssp HHHTSCCSEEEECSCC----HH--HHHHHHHHSCTT
T ss_pred ccCCCCceEEEeccCC----ch--hHHHHHHHhcCC
Confidence 2233468999998753 22 345555558888
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=90.49 E-value=0.12 Score=50.95 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=30.4
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL 598 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~ 598 (1201)
+.+||+|||+|.+|-.+|.+|+++ +.+|+|++|.
T Consensus 5 ~~~kVvVIGaGiaGl~~A~~L~~~-G~~V~vier~ 38 (268)
T d1c0pa1 5 SQKRVVVLGSGVIGLSSALILARK-GYSVHILARD 38 (268)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCCcEEEECccHHHHHHHHHHHHC-CCCEEEEeCC
Confidence 357999999999999999999987 5699999985
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=90.33 E-value=0.17 Score=48.46 Aligned_cols=84 Identities=12% Similarity=-0.083 Sum_probs=48.6
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhh
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFA 275 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~ 275 (1201)
+||.|+|.|+.|..-...+++-|+ .+.+||......+.... .|. .+. +.+.
T Consensus 1 MkI~iIG~G~mG~~lA~~l~~~g~----------------~V~~~d~~~~~~~~a~~-~~~-~~~---------~~~~-- 51 (165)
T d2f1ka2 1 MKIGVVGLGLIGASLAGDLRRRGH----------------YLIGVSRQQSTCEKAVE-RQL-VDE---------AGQD-- 51 (165)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----------------EEEEECSCHHHHHHHHH-TTS-CSE---------EESC--
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC----------------EEEEEECCchHHHHHHH-hhc-cce---------eeee--
Confidence 579999999999876667777664 35677665554444333 221 111 1111
Q ss_pred hhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 276 SKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 276 ~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
.+.++.+|+||-|+-+. ....++ +++...++++
T Consensus 52 ~~~~~~~DiIilavp~~-~~~~vl--~~l~~~l~~~ 84 (165)
T d2f1ka2 52 LSLLQTAKIIFLCTPIQ-LILPTL--EKLIPHLSPT 84 (165)
T ss_dssp GGGGTTCSEEEECSCHH-HHHHHH--HHHGGGSCTT
T ss_pred cccccccccccccCcHh-hhhhhh--hhhhhhcccc
Confidence 13467899999887543 122233 3444546666
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=90.32 E-value=0.18 Score=52.33 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=31.1
Q ss_pred ccCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccc
Q psy12817 192 SIGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEML 227 (1201)
Q Consensus 192 ~i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dl 227 (1201)
++.-.+|+|-|.||||+.+.+.+.++|++.|...|.
T Consensus 28 ~l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 28 GIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecc
Confidence 456789999999999999999999999987666654
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=90.14 E-value=0.9 Score=45.29 Aligned_cols=100 Identities=17% Similarity=0.143 Sum_probs=62.7
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC----CCCeEE-EEeC--CHHHHHHHHHH------cC-CeeE------------EE--
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD----ENIHIT-LGSL--LKEDIDKVTNE------FG-RVEA------------TL-- 616 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~----~~~~Vt-VadR--~~ekAe~La~~------~~-~v~~------------v~-- 616 (1201)
++||+|=|.|++||.+.+.+.++ ++++|+ +-|. +.+.+.-+.+. ++ .++. ..
T Consensus 2 ~ikigINGFGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLlkyDSvhG~~~~~v~~~~~~~~~~~~~~~i~~ 81 (190)
T d1k3ta1 2 PIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVVN 81 (190)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHHHEETTTEECSSCEEEECSSTTCSSCCEEEET
T ss_pred CeEEEEECCChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHhhccccccCCCceEEEccCccccccccceEEc
Confidence 57999999999999999988765 345544 3444 45555444431 11 1111 00
Q ss_pred ------eecCCCCchHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 617 ------IDVNNGGSDNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 617 ------lDV~D~~~e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+.-.. +++++.=--.++|+||.|+..+...+-++..+++|+.-|-.|.
T Consensus 82 g~~i~~~~~~~-~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSA 135 (190)
T d1k3ta1 82 GHRILCVKAQR-NPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISA 135 (190)
T ss_dssp TEEEEEEECCS-CGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESS
T ss_pred CceEEecccCC-ChhHCCHhhcCCcEEEEecccccccccchhhcccCcceeeecc
Confidence 00011 1333221112799999999988889999999999988776654
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.02 E-value=0.25 Score=48.49 Aligned_cols=92 Identities=11% Similarity=0.079 Sum_probs=58.3
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc-----CCcEEE
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR-----SADLVV 638 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~-----~~DVVI 638 (1201)
...|+|.| +|.||..+++.+...+...|+.++.+.++..+++... +.. ..+|..+ +.+.+.++ ++|+|+
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-gad-~vi~~~~---~~~~~~~~~~~~~GvDvv~ 105 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-GFD-AAVNYKT---GNVAEQLREACPGGVDVYF 105 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-CCS-EEEETTS---SCHHHHHHHHCTTCEEEEE
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-cce-EEeeccc---hhHHHHHHHHhccCceEEE
Confidence 36799999 6999999999877665445666777888877777766 333 3356654 22333222 499999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEE
Q psy12817 639 SLLPYNLHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 639 s~lP~~~h~~VakacIeaGkh~VD 662 (1201)
+++... +..-.-.|++.+=.++.
T Consensus 106 D~vGg~-~~~~~~~~l~~~G~iv~ 128 (187)
T d1vj1a2 106 DNVGGD-ISNTVISQMNENSHIIL 128 (187)
T ss_dssp ESSCHH-HHHHHHTTEEEEEEEEE
T ss_pred ecCCch-hHHHHhhhccccccEEE
Confidence 999632 22233344444444444
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=89.88 E-value=0.33 Score=46.29 Aligned_cols=79 Identities=13% Similarity=0.036 Sum_probs=46.6
Q ss_pred CeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHh-hHH-HhcCCcccccccccCcccccc
Q psy12817 195 PLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRN-YLE-RIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 195 P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~-~~e-~~~gg~f~~~ey~~~pe~y~s 272 (1201)
|-||.|+|+|+||..+...+...|.- +...+||+.-...+ ... -.+...|. .++....+
T Consensus 1 p~Ki~IIGaG~VG~~~a~~l~~~~l~--------------~ElvL~D~~~~~~~g~a~Dl~~a~~~~-----~~~~i~~~ 61 (143)
T d1llda1 1 PTKLAVIGAGAVGSTLAFAAAQRGIA--------------REIVLEDIAKERVEAEVLDMQHGSSFY-----PTVSIDGS 61 (143)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC--------------SEEEEECSSHHHHHHHHHHHHHTGGGS-----TTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCC--------------cEEEEEEeccccchhHHHHHHhccccC-----CCceeecC
Confidence 77999999999999988777666532 45567776543221 000 01122222 22222222
Q ss_pred hhhhhcCCcCcEEEEceecCC
Q psy12817 273 LFASKIAPYASIIINGIYWAV 293 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~~ 293 (1201)
... +-+..+|+||.++..+.
T Consensus 62 ~~~-~~~~daDvVVitaG~~~ 81 (143)
T d1llda1 62 DDP-EICRDADMVVITAGPRQ 81 (143)
T ss_dssp SCG-GGGTTCSEEEECCCCCC
T ss_pred CCH-HHhhCCcEEEEeccccc
Confidence 222 23678999999999874
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=89.84 E-value=0.46 Score=45.43 Aligned_cols=86 Identities=14% Similarity=0.151 Sum_probs=52.0
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhh
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFA 275 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~ 275 (1201)
-+|+|+|+|.+|+-|+++++.+|+ .+.+.+....+.+.++ +.|.... .+| .. ..+.
T Consensus 32 ~~VlI~GaG~vG~~a~qlak~~Ga----------------~~i~~~~~~~~~~~a~-~lGad~~-i~~-~~-----~~~~ 87 (168)
T d1uufa2 32 KKVGVVGIGGLGHMGIKLAHAMGA----------------HVVAFTTSEAKREAAK-ALGADEV-VNS-RN-----ADEM 87 (168)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----------------EEEEEESSGGGHHHHH-HHTCSEE-EET-TC-----HHHH
T ss_pred CEEEEeccchHHHHHHHHhhcccc----------------cchhhccchhHHHHHh-ccCCcEE-EEC-ch-----hhHH
Confidence 578999999999999999999994 3445555555555444 3664211 011 11 1122
Q ss_pred hhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 276 SKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 276 ~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
.+....+|++|.|+.- |. +-++.-.+++++
T Consensus 88 ~~~~~~~D~vid~~g~----~~--~~~~~~~~l~~~ 117 (168)
T d1uufa2 88 AAHLKSFDFILNTVAA----PH--NLDDFTTLLKRD 117 (168)
T ss_dssp HTTTTCEEEEEECCSS----CC--CHHHHHTTEEEE
T ss_pred HHhcCCCceeeeeeec----ch--hHHHHHHHHhcC
Confidence 3344568999999743 22 233334447777
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=89.73 E-value=0.23 Score=48.06 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=59.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
...+|+|.| +|.+|..+++.+... +.+|+++++++++.+.+. ++ ++..+ +|..+ ...-...-+++|+|++|++
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~-G~~vi~~~~~~~~~~~~~-~l-Ga~~~-i~~~~--~~~~~~~~~g~D~v~d~~G 100 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPL-AL-GAEEA-ATYAE--VPERAKAWGGLDLVLEVRG 100 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHH-HT-TCSEE-EEGGG--HHHHHHHTTSEEEEEECSC
T ss_pred CCCEEEEEeccccchhhhhhhhccc-cccccccccccccccccc-cc-cccee-eehhh--hhhhhhccccccccccccc
Confidence 457899999 599999999987665 578888888888776544 44 44432 45443 2222223357999999986
Q ss_pred CcccHHHHHHHHHcCCeEEEc
Q psy12817 643 YNLHHHVAEFCIQHGKNLVTA 663 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~VD~ 663 (1201)
..+ +-+-.|++.+=.++..
T Consensus 101 ~~~--~~~~~~l~~~G~~v~~ 119 (171)
T d1iz0a2 101 KEV--EESLGLLAHGGRLVYI 119 (171)
T ss_dssp TTH--HHHHTTEEEEEEEEEC
T ss_pred hhH--HHHHHHHhcCCcEEEE
Confidence 432 3333455555556654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.44 E-value=0.066 Score=55.35 Aligned_cols=71 Identities=8% Similarity=-0.020 Sum_probs=50.8
Q ss_pred eEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc-------cCCcEEE
Q psy12817 567 NVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV-------RSADLVV 638 (1201)
Q Consensus 567 KVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI-------~~~DVVI 638 (1201)
.++|-| ++.+|+.+++.|++. +.+|.+.+|+.++++++.... .....+|+.| .+++++++ ...|++|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~-Ga~V~i~~r~~~~~~~~~~~~--~~~~~~dv~~--~~~~~~~~~~~~~~~G~iDiLV 76 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEAFA--ETYPQLKPMS--EQEPAELIEAVTSAYGQVDVLV 76 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHH--HHCTTSEECC--CCSHHHHHHHHHHHHSCCCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhhh--CcEEEeccCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence 367888 678999999999987 579999999988777665432 1233467776 44554444 3589999
Q ss_pred EcCC
Q psy12817 639 SLLP 642 (1201)
Q Consensus 639 s~lP 642 (1201)
|+..
T Consensus 77 nNAg 80 (252)
T d1zmta1 77 SNDI 80 (252)
T ss_dssp EECC
T ss_pred ECCc
Confidence 8764
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=89.32 E-value=0.15 Score=51.66 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=32.0
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
....|||+|||+|..|-.+|.+|++. +++|+|.+++.
T Consensus 27 ~~~pkkV~IIGaG~aGLsaA~~L~~~-G~~V~vlE~~~ 63 (370)
T d2iida1 27 TSNPKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASE 63 (370)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 34568999999999999999999987 58999998764
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=89.29 E-value=0.069 Score=51.44 Aligned_cols=94 Identities=14% Similarity=0.107 Sum_probs=59.2
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhh
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFA 275 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~ 275 (1201)
+||.|+|.|+.|.+-..-+.+-|+ .+.+|+....+.+.++. .+.... .+|
T Consensus 1 MkIgiIGlG~MG~~~A~~L~~~G~----------------~V~~~d~~~~~~~~~~~-~~~~~~-----~~~-------- 50 (161)
T d1vpda2 1 MKVGFIGLGIMGKPMSKNLLKAGY----------------SLVVSDRNPEAIADVIA-AGAETA-----STA-------- 50 (161)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC----------------EEEEECSCHHHHHHHHH-TTCEEC-----SSH--------
T ss_pred CEEEEEehhHHHHHHHHHHHHCCC----------------eEEEEeCCcchhHHHHH-hhhhhc-----ccH--------
Confidence 579999999999997777766663 47788887777666665 333211 111
Q ss_pred hhcCCcCcEEEEceecCCCC-CcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeecc
Q psy12817 276 SKIAPYASIIINGIYWAVGS-PKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISA 337 (1201)
Q Consensus 276 ~~i~p~~DvlIn~~~w~~~~-PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~ 337 (1201)
++.+..+|+||.|.-=+... ..+...+.+...++|| .+|+|.|.
T Consensus 51 ~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~~~~~~g------------------~iiid~sT 95 (161)
T d1vpda2 51 KAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPG------------------TVLIDMSS 95 (161)
T ss_dssp HHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTT------------------CEEEECSC
T ss_pred HHHHhCCCeEEEEcCCHHHHHHHHhCCcchhhccCCC------------------CEEEECCC
Confidence 24566899999997433211 1222223333336777 78999864
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=89.16 E-value=0.083 Score=46.47 Aligned_cols=74 Identities=11% Similarity=0.096 Sum_probs=46.0
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhh
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFA 275 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~ 275 (1201)
.+|+|+|.|..|+.+++.+.+.| +.+.++|.+......-+-+.+..+. ...+.
T Consensus 6 K~v~ViGlG~sG~s~a~~L~~~g----------------~~v~~~D~~~~~~~~~~~~~~~~~~-----------~~~~~ 58 (93)
T d2jfga1 6 KNVVIIGLGLTGLSCVDFFLARG----------------VTPRVMDTRMTPPGLDKLPEAVERH-----------TGSLN 58 (93)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT----------------CCCEEEESSSSCTTGGGSCTTSCEE-----------ESBCC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC----------------CEEEEeeCCcCchhHHHHhhcccee-----------ecccc
Confidence 57999999999999999999988 5577777654322111101111111 11112
Q ss_pred hhcCCcCcEEEEceecCCCCC
Q psy12817 276 SKIAPYASIIINGIYWAVGSP 296 (1201)
Q Consensus 276 ~~i~p~~DvlIn~~~w~~~~P 296 (1201)
+..+..+|+||-.-.++...|
T Consensus 59 ~~~~~~~d~vi~SPGi~~~~~ 79 (93)
T d2jfga1 59 DEWLMAADLIVASPGIALAHP 79 (93)
T ss_dssp HHHHHHCSEEEECTTSCTTSH
T ss_pred hhhhccCCEEEECCCCCCCCH
Confidence 233457899998888876655
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=89.11 E-value=0.45 Score=49.20 Aligned_cols=111 Identities=21% Similarity=0.211 Sum_probs=68.4
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEE-EEeC----------CHHHHHH-----------HHHHcCCeeEEEeec
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHIT-LGSL----------LKEDIDK-----------VTNEFGRVEATLIDV 619 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~Vt-VadR----------~~ekAe~-----------La~~~~~v~~v~lDV 619 (1201)
+.+.++|+|-|.|.||+.++++|.+.+ .+|+ +.|. +.+.+.+ ....+++.+. +
T Consensus 28 ~l~g~~v~IqGfGnVG~~~a~~L~~~G-akvv~vsD~~g~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~----~ 102 (242)
T d1v9la1 28 GIEGKTVAIQGMGNVGRWTAYWLEKMG-AKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEF----V 102 (242)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTT-CEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCC----C
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CeEEEeecccccccccccccHHHHHHHhhcchhhHHHhhhhccCceE----e
Confidence 456799999999999999999999874 6654 4443 2222222 2222333322 1
Q ss_pred CCCCchHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEec
Q psy12817 620 NNGGSDNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNE 687 (1201)
Q Consensus 620 ~D~~~e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e 687 (1201)
.+ .+.+-+ .+||+.+=|. ....+...++ +.++.+|... ..+++.. +..+++||.++++
T Consensus 103 ~~--~~~i~~--~~~DIliPcA~~~~I~~~~a~---~i~ak~IvegAN~p~t~~a~---~~L~~rgI~~~PD 164 (242)
T d1v9la1 103 KN--PDAIFK--LDVDIFVPAAIENVIRGDNAG---LVKARLVVEGANGPTTPEAE---RILYERGVVVVPD 164 (242)
T ss_dssp SS--TTGGGG--CCCSEEEECSCSSCBCTTTTT---TCCCSEEECCSSSCBCHHHH---HHHHTTTCEEECH
T ss_pred eC--cchhcc--ccccEEeecchhccccHHHHH---hcccCEEEecCCCCCChhHH---HHHHhCCeEEeCc
Confidence 12 223322 2799999997 5556655443 3456777764 4555543 4467899999874
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.95 E-value=0.16 Score=48.85 Aligned_cols=35 Identities=31% Similarity=0.289 Sum_probs=30.2
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
.+||+|||+|.+|-.+|.+|++.+-..|+|+++..
T Consensus 4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~ 38 (196)
T d1gtea4 4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE 38 (196)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence 58999999999999999999998533599988764
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=88.89 E-value=1.1 Score=43.91 Aligned_cols=97 Identities=15% Similarity=0.172 Sum_probs=63.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH--cC--------Ce-----------eEEEeecCCCCc
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNE--FG--------RV-----------EATLIDVNNGGS 624 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~--~~--------~v-----------~~v~lDV~D~~~ 624 (1201)
+||+|=|.|++||.+.+.|..+ +++|+.++-- ...+.++-. |. .+ ..+.+--.. ++
T Consensus 1 ikigINGfGRIGR~~~R~l~~~-~i~iv~INd~-~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~-~p 77 (168)
T d2g82a1 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVK-DP 77 (168)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCS-SG
T ss_pred CEEEEECCcHHHHHHHHHHhcC-CCEEEEECCC-cchhhhhheeecccccCccccccccccceeEecceeEEEEecC-Ch
Confidence 5899999999999999988765 5776655432 344555432 21 01 111111111 24
Q ss_pred hHHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 625 DNLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 625 e~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
+++.=--.++|+||.|+..+...+-++..+++|+.-|-.|.
T Consensus 78 ~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSA 118 (168)
T d2g82a1 78 KEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITA 118 (168)
T ss_dssp GGCCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESS
T ss_pred HHCcccccCCceeEeccccccchHHhhhhhccccceeeecc
Confidence 44432224789999999988889999999999987776664
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=88.84 E-value=0.17 Score=49.75 Aligned_cols=32 Identities=19% Similarity=0.214 Sum_probs=29.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL 598 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~ 598 (1201)
|||+|||+|..|-.+|.+|++. +++|+|.+++
T Consensus 2 KkV~IIGaG~aGL~aA~~La~~-G~~V~vlE~~ 33 (373)
T d1seza1 2 KRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAE 33 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-SCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCEEEEeCC
Confidence 8999999999999999999886 6899999865
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.74 E-value=0.33 Score=46.44 Aligned_cols=74 Identities=18% Similarity=0.185 Sum_probs=47.9
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCC------CCeEEEEeCCH--HHHHHHHHHc-----CCeeEEEeecCCCCchHHHh
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDE------NIHITLGSLLK--EDIDKVTNEF-----GRVEATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~------~~~VtVadR~~--ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~e 629 (1201)
+.+||.|+|| |.||+.++..|+... ..++.+.|.+. ++++.+.-.. +... ...+.+ ...+
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~----~~~~ 75 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK--DVIATD----KEEI 75 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE--EEEEES----CHHH
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccc--ccccCc----cccc
Confidence 4579999995 999999999887532 23567777644 4555554321 2222 223332 3556
Q ss_pred hccCCcEEEEcCCC
Q psy12817 630 LVRSADLVVSLLPY 643 (1201)
Q Consensus 630 lI~~~DVVIs~lP~ 643 (1201)
.++++|+||.+...
T Consensus 76 ~~~~~dvVVitag~ 89 (154)
T d5mdha1 76 AFKDLDVAILVGSM 89 (154)
T ss_dssp HTTTCSEEEECCSC
T ss_pred ccCCceEEEEeccc
Confidence 77899999999843
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=88.71 E-value=0.8 Score=47.20 Aligned_cols=113 Identities=16% Similarity=0.232 Sum_probs=72.4
Q ss_pred cccCCCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeC----------CHHHHHHHHHH------cCCeeEEEeecCCCC
Q psy12817 561 QTEESRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSL----------LKEDIDKVTNE------FGRVEATLIDVNNGG 623 (1201)
Q Consensus 561 ~~~~mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR----------~~ekAe~La~~------~~~v~~v~lDV~D~~ 623 (1201)
++.+.++|+|-|.|.||..++++|.+..+.+ |++.|. +.+++.+.... +++.+.+ .
T Consensus 28 ~~l~g~~v~IqGfGnVG~~~a~~L~~~~G~kvv~vsD~~g~i~~~~G~d~~~l~~~~~~~~~~~~~~~~~~~----~--- 100 (239)
T d1gtma1 28 DTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWKNEHGSVKDFPGATNI----T--- 100 (239)
T ss_dssp SCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEEEECHHHHHHHHHHHSSSTTCTTSEEE----C---
T ss_pred CCcCCCEEEEECCCHHHHHHHHHHHHhcCcceeeccccccceecCCcCCHHHHHHHHHhccccccCCCCeee----c---
Confidence 3467899999999999999999998764555 455553 34444444333 2333322 1
Q ss_pred chHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEecc
Q psy12817 624 SDNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEV 688 (1201)
Q Consensus 624 ~e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~ 688 (1201)
.+++-. .+||+++=|. ....+..-++ +.++.+|... ..+++. ++..+++||.++|+.
T Consensus 101 ~~~i~~--~~~DIl~PcA~~~~I~~~~a~---~i~ak~I~e~AN~p~t~ea---~~~L~~rgI~~iPD~ 161 (239)
T d1gtma1 101 NEELLE--LEVDVLAPAAIEEVITKKNAD---NIKAKIVAEVANGPVTPEA---DEILFEKGILQIPDF 161 (239)
T ss_dssp HHHHHH--SCCSEEEECSCSCCBCTTGGG---GCCCSEEECCSSSCBCHHH---HHHHHHTTCEEECHH
T ss_pred cccccc--ccccEEeeccccccccHHHHH---hccccEEEecCCCCCCHHH---HHHHHHCCCEEecch
Confidence 233322 3899999887 5666655444 4566788774 355543 345678999998843
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=88.34 E-value=0.35 Score=47.03 Aligned_cols=79 Identities=15% Similarity=0.105 Sum_probs=46.0
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+.-.+|+|+|+|-+++.++..+...| .+.|+.....+.+.+.......+... + ..+-.+.
T Consensus 16 ~~~k~vlIlGaGG~arai~~aL~~~~-----------------~i~I~nR~~~ka~~l~~~~~~~~~~~-~-~~~~~~~- 75 (177)
T d1nvta1 16 VKDKNIVIYGAGGAARAVAFELAKDN-----------------NIIIANRTVEKAEALAKEIAEKLNKK-F-GEEVKFS- 75 (177)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS-----------------EEEEECSSHHHHHHHHHHHHHHHTCC-H-HHHEEEE-
T ss_pred cCCCEEEEECCcHHHHHHHHHHcccc-----------------ceeeehhhhhHHHHHHHHHHHhhchh-h-hhhhhhh-
Confidence 44578999999999998888776554 45677666666555544222111110 0 0000000
Q ss_pred hhhhhcCCcCcEEEEceecC
Q psy12817 273 LFASKIAPYASIIINGIYWA 292 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~ 292 (1201)
. .....+.+|++|||.-..
T Consensus 76 ~-~~~~~~~~dliIn~tp~g 94 (177)
T d1nvta1 76 G-LDVDLDGVDIIINATPIG 94 (177)
T ss_dssp C-TTCCCTTCCEEEECSCTT
T ss_pred h-hhhccchhhhhccCCccc
Confidence 0 123466789999998875
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=87.79 E-value=0.54 Score=49.01 Aligned_cols=115 Identities=15% Similarity=0.085 Sum_probs=72.9
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCe-EEEEeC----------CHHHHHHHHHHc--------------CCeeEEE
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIH-ITLGSL----------LKEDIDKVTNEF--------------GRVEATL 616 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~-VtVadR----------~~ekAe~La~~~--------------~~v~~v~ 616 (1201)
+.+.++|+|=|.|.||+.++++|.+.+ .+ |+|.|. +.+++.+...+. .+.+.
T Consensus 33 ~l~g~~v~IQGfGnVG~~~a~~L~e~G-akvvavsD~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 109 (255)
T d1bgva1 33 TLVGKTVALAGFGNVAWGAAKKLAELG-AKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQF-- 109 (255)
T ss_dssp CSTTCEEEECCSSHHHHHHHHHHHHHT-CEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEE--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CeEEEEecCCceEecCCCCCHHHHHHHHHHHhhhcCcchhhhhhhcCcee--
Confidence 456789999999999999999999875 55 556553 233332221110 01121
Q ss_pred eecCCCCchHHHhhccCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEcc---CChHHHHHHHHHHHHcCCEEEecc
Q psy12817 617 IDVNNGGSDNLSGLVRSADLVVSLL-PYNLHHHVAEFCIQHGKNLVTAS---YLSPEMMALHERAASAGITVLNEV 688 (1201)
Q Consensus 617 lDV~D~~~e~L~elI~~~DVVIs~l-P~~~h~~VakacIeaGkh~VD~S---yvs~e~~eLde~AkeAGVtil~e~ 688 (1201)
++- +++-+ .+||+++=|. ....+..-++.....|+.+|... .++++..+ ...+++||.++++.
T Consensus 110 ~~~-----~~~~~--~~~DiliPcA~~~~I~~~~a~~l~a~~ck~I~EgAN~p~t~ea~~--~ll~~~gI~vvPD~ 176 (255)
T d1bgva1 110 FPG-----EKPWG--QKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEALR--FLMQQPNMVVAPSK 176 (255)
T ss_dssp EET-----CCGGG--SCCSEEECCSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHH--HHHHCTTCEEECHH
T ss_pred ech-----hhccc--ccccEEeeccccccccHHHHHhhhhcCceEEecCCCCCcchHHHH--HHHHhcCCEEehHh
Confidence 121 11212 3799998776 56778888887777788888885 45554322 23566899998743
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=87.60 E-value=0.24 Score=46.26 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=30.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhC-CCCeEEEEeCCH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRD-ENIHITLGSLLK 599 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~-~~~~VtVadR~~ 599 (1201)
.|||+|||+|.+|-.++.+|.+. ++.+|++.++++
T Consensus 2 gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 48999999999999999999875 457899998764
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=87.49 E-value=0.69 Score=43.87 Aligned_cols=80 Identities=16% Similarity=0.220 Sum_probs=50.1
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhh
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFA 275 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~ 275 (1201)
+|+.|+|.|+.|+.-+.-+.. .|.++.+|+....+.+.+..+.|..+.. + .
T Consensus 1 MkIg~IG~G~mG~al~~~l~~----------------~~~~i~v~~r~~~~~~~l~~~~g~~~~~-----~--------~ 51 (152)
T d2ahra2 1 MKIGIIGVGKMASAIIKGLKQ----------------TPHELIISGSSLERSKEIAEQLALPYAM-----S--------H 51 (152)
T ss_dssp CEEEEECCSHHHHHHHHHHTT----------------SSCEEEEECSSHHHHHHHHHHHTCCBCS-----S--------H
T ss_pred CEEEEEeccHHHHHHHHHHHh----------------CCCeEEEEcChHHhHHhhccccceeeec-----h--------h
Confidence 479999999999854443433 2356788887777766666555543221 1 1
Q ss_pred hhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 276 SKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 276 ~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
++++..+|+||-|+- |..+ .+-++. ++++
T Consensus 52 ~~~~~~~dvIilavk-----p~~~-~~vl~~-l~~~ 80 (152)
T d2ahra2 52 QDLIDQVDLVILGIK-----PQLF-ETVLKP-LHFK 80 (152)
T ss_dssp HHHHHTCSEEEECSC-----GGGH-HHHHTT-SCCC
T ss_pred hhhhhccceeeeecc-----hHhH-HHHhhh-cccc
Confidence 345668999999974 3332 344555 5665
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=87.19 E-value=0.43 Score=45.77 Aligned_cols=93 Identities=11% Similarity=0.081 Sum_probs=59.0
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhcc--CCcEEEEc
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI~--~~DVVIs~ 640 (1201)
..+|+|.| +|.+|..+++.+... +.+|++.+++.++.+.+. ++ ++.. .+|..+.+ .+.+.++-. ..|+|+++
T Consensus 29 g~~Vlv~ga~g~vG~~~iqlak~~-Ga~Vi~~~~s~~k~~~~~-~l-Ga~~-vi~~~~~d~~~~v~~~t~g~g~d~v~d~ 104 (179)
T d1qora2 29 DEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSAL-KA-GAWQ-VINYREEDLVERLKEITGGKKVRVVYDS 104 (179)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHH-HH-TCSE-EEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCEEEEEccccccchHHHHHHHHh-CCeEeecccchHHHHHHH-hc-CCeE-EEECCCCCHHHHHHHHhCCCCeEEEEeC
Confidence 46899997 677999998877664 578999999999887655 44 3443 35666511 123333332 47999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~VD 662 (1201)
+... +...+-.|++.+=+++.
T Consensus 105 ~g~~-~~~~~~~~l~~~G~~v~ 125 (179)
T d1qora2 105 VGRD-TWERSLDCLQRRGLMVS 125 (179)
T ss_dssp SCGG-GHHHHHHTEEEEEEEEE
T ss_pred ccHH-HHHHHHHHHhcCCeeee
Confidence 9644 33344444444334444
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=87.14 E-value=0.25 Score=52.36 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=30.9
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
++|||+|||||..|..+|..|++. +.+|+|..++.
T Consensus 1 k~KKI~IIGaG~sGL~aA~~L~k~-G~~V~viEk~~ 35 (314)
T d2bi7a1 1 KSKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRD 35 (314)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHhC-CCCEEEEECCC
Confidence 479999999999999999999976 68999998764
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=86.86 E-value=0.27 Score=48.65 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=32.7
Q ss_pred ccCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 562 TEESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 562 ~~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
..+.|||+|||+|..|-.+|.+|+++ +++|++++++.
T Consensus 40 ~~~~k~V~IIGaGPAGL~AA~~la~~-G~~Vtl~E~~~ 76 (179)
T d1ps9a3 40 AVQKKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHS 76 (179)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred CCCCcEEEEECccHHHHHHHHHHHhh-ccceEEEeccC
Confidence 45679999999999999999999887 58999999864
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=86.85 E-value=0.48 Score=46.04 Aligned_cols=75 Identities=11% Similarity=0.030 Sum_probs=48.1
Q ss_pred cCCeEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 193 IGPLTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 193 i~P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+...+|+|+|+|-+|+.++..+...+ .++.|+.....+.+.+......... .+..
T Consensus 16 ~~~k~vlIlGaGGaarai~~aL~~~~----------------~~i~I~nR~~~~a~~l~~~~~~~~~---------~~~~ 70 (171)
T d1p77a1 16 RPNQHVLILGAGGATKGVLLPLLQAQ----------------QNIVLANRTFSKTKELAERFQPYGN---------IQAV 70 (171)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT----------------CEEEEEESSHHHHHHHHHHHGGGSC---------EEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHcccC----------------ceeeeccchHHHHHHHHHHHhhccc---------cchh
Confidence 44678999999999999999887754 4567777776666655543331111 1111
Q ss_pred hhhhhcCCcCcEEEEceecC
Q psy12817 273 LFASKIAPYASIIINGIYWA 292 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~ 292 (1201)
.+.......+|+||||.-..
T Consensus 71 ~~~~~~~~~~diiIN~tp~g 90 (171)
T d1p77a1 71 SMDSIPLQTYDLVINATSAG 90 (171)
T ss_dssp EGGGCCCSCCSEEEECCCC-
T ss_pred hhccccccccceeeeccccc
Confidence 12222356799999997765
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=86.80 E-value=0.69 Score=45.41 Aligned_cols=97 Identities=12% Similarity=0.011 Sum_probs=60.4
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEE-eC--CHHHHHHHHHH---c---C-Cee-----------EEEeecCCCCch
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLG-SL--LKEDIDKVTNE---F---G-RVE-----------ATLIDVNNGGSD 625 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVa-dR--~~ekAe~La~~---~---~-~v~-----------~v~lDV~D~~~e 625 (1201)
||+|=|.|++||.+.+.+.+++ .+|+.. |. +.+.+.-+.+. + + .++ .+.+--.. +++
T Consensus 2 kIgINGfGRIGR~~~R~~~~~~-~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~-~p~ 79 (169)
T d1dssg1 2 KIGINGFGRIGRLVLRAALEMG-AQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEM-KPE 79 (169)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT-CCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCS-SGG
T ss_pred eEEEECCcHHHHHHHHHHHhCC-CcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecC-ChH
Confidence 7999999999999999998764 565544 42 33444433321 1 1 011 11111111 133
Q ss_pred HHHhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccC
Q psy12817 626 NLSGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASY 665 (1201)
Q Consensus 626 ~L~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Sy 665 (1201)
++.=--.++|+||.|+..+...+-++.-++.|+..|-.|.
T Consensus 80 ~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisa 119 (169)
T d1dssg1 80 NIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISA 119 (169)
T ss_dssp GCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESS
T ss_pred HCCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecC
Confidence 3321112799999999988888888888888988777664
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=86.79 E-value=0.13 Score=49.48 Aligned_cols=28 Identities=21% Similarity=0.390 Sum_probs=25.3
Q ss_pred CeEEEEEcCcHHHHHHHHHHhhCCCccc
Q psy12817 195 PLTIVFTGSGNVSQGAQEIFQELPYEYV 222 (1201)
Q Consensus 195 P~~vvv~G~G~vg~GAi~~a~~Lg~~~V 222 (1201)
|.||+|+|+|++|+.|+..+.++|+..|
T Consensus 4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V 31 (196)
T d1gtea4 4 SAKIALLGAGPASISCASFLARLGYSDI 31 (196)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCE
T ss_pred CCEEEEECChHHHHHHHHHHHHCCCCeE
Confidence 7899999999999999999999997534
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=86.76 E-value=1.6 Score=40.62 Aligned_cols=111 Identities=15% Similarity=0.139 Sum_probs=76.3
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcCC
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLLP 642 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~lP 642 (1201)
+..||+|-| .|..|+.+++...+. +.+| |++-++.+.-+ .+.++. +.|.-.+++++ .++|+-+..+|
T Consensus 6 k~trVivQGiTG~~G~~ht~~m~~y-GT~i-VaGVtPgkgG~---~~~giP-----Vf~tV~eAv~~--~~~d~SvIfVP 73 (121)
T d1oi7a1 6 RETRVLVQGITGREGQFHTKQMLTY-GTKI-VAGVTPGKGGM---EVLGVP-----VYDTVKEAVAH--HEVDASIIFVP 73 (121)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCEE-EEEECTTCTTC---EETTEE-----EESSHHHHHHH--SCCSEEEECCC
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHHh-CCce-EeeeecCCCCc---EEECCc-----hHhhHHHHHHh--cCCeEEEEeeC
Confidence 346899999 899999999998886 4454 45556654321 122332 22200233433 27899999999
Q ss_pred CcccHHHHHHHHHcCCeE-EEccC--ChHHHHHHHHHHHHcCCEEEe
Q psy12817 643 YNLHHHVAEFCIQHGKNL-VTASY--LSPEMMALHERAASAGITVLN 686 (1201)
Q Consensus 643 ~~~h~~VakacIeaGkh~-VD~Sy--vs~e~~eLde~AkeAGVtil~ 686 (1201)
+.+...-+..|+++|..+ ++++- -..+|.++.+.+++.+..++.
T Consensus 74 p~~a~dAi~EAi~agI~liv~ITEgVPv~Dm~~i~~~~~~~~~~liG 120 (121)
T d1oi7a1 74 APAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLIG 120 (121)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCEEeC
Confidence 988888888999999986 44442 334678888889999988875
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=86.60 E-value=0.28 Score=51.82 Aligned_cols=36 Identities=19% Similarity=0.138 Sum_probs=31.1
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCC-CCeEEEEeCCH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDE-NIHITLGSLLK 599 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~-~~~VtVadR~~ 599 (1201)
.||||+|||+|..|-.+|.+|++.+ ..+|+|..|+.
T Consensus 3 ~~KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~ 39 (335)
T d2gv8a1 3 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG 39 (335)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 4799999999999999999998764 36899998874
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=86.48 E-value=1.8 Score=40.11 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=75.6
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc--CCcEEEEc
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR--SADLVVSL 640 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~--~~DVVIs~ 640 (1201)
+..||+|-| .|..|+.+++.+.+. +.+| |++-++.+.-+ .+.++. +.| .++++++ ++|+-+..
T Consensus 5 k~trVlvQGiTG~~G~~ht~~m~~y-GT~v-VaGVtPgkgG~---~~~giP-----Vf~----sV~eAv~~~~~~~SvIf 70 (119)
T d2nu7a1 5 KNTKVICQGFTGSQGTFHSEQAIAY-GTKM-VGGVTPGKGGT---THLGLP-----VFN----TVREAVAATGATASVIY 70 (119)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCEE-EEEECTTCTTE---EETTEE-----EES----SHHHHHHHHCCCEEEEC
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHHh-CCce-EEEEccCCCCc---ccCCCc-----hhh----HHHHHHHHhCCCeEEEe
Confidence 456999999 799999999988876 4454 56666655321 122332 223 3333333 78988888
Q ss_pred CCCcccHHHHHHHHHcCCeE-EEccC--ChHHHHHHHHHHHHcCCEEE
Q psy12817 641 LPYNLHHHVAEFCIQHGKNL-VTASY--LSPEMMALHERAASAGITVL 685 (1201)
Q Consensus 641 lP~~~h~~VakacIeaGkh~-VD~Sy--vs~e~~eLde~AkeAGVtil 685 (1201)
+|+.+...-+..|+++|... |+++- -..+|.++.+.++++|+.++
T Consensus 71 VPp~~a~dA~~EAi~agI~~iV~ITEgIP~~D~~~i~~~~~~~~~~li 118 (119)
T d2nu7a1 71 VPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI 118 (119)
T ss_dssp CCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred ccHHHHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHhhCCCEEe
Confidence 89988888888999999875 44442 34468888899999999875
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=86.36 E-value=0.28 Score=47.63 Aligned_cols=94 Identities=10% Similarity=0.016 Sum_probs=57.2
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCC-chHHHhhc--cCCcEEEE
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGG-SDNLSGLV--RSADLVVS 639 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~-~e~L~elI--~~~DVVIs 639 (1201)
+..+|+|.|+ |.+|..+++..... +.+|+..+++.++.+.+.+ . +...+ +|..+.+ .+.+.+.. .++|+|++
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~-~-Ga~~v-i~~~~~~~~~~~~~~~~~~Gvd~v~D 104 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQ-I-GFDAA-FNYKTVNSLEEALKKASPDGYDCYFD 104 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-T-TCSEE-EETTSCSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHcc-CCEEEEeCCCHHHHHHHHh-h-hhhhh-cccccccHHHHHHHHhhcCCCceeEE
Confidence 4578999995 78999888877665 5788888899888776554 3 33333 4444301 12222222 35899999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEE
Q psy12817 640 LLPYNLHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 640 ~lP~~~h~~VakacIeaGkh~VD 662 (1201)
|+... +..-.-.|++.+-.++.
T Consensus 105 ~vG~~-~~~~~~~~l~~~G~~v~ 126 (182)
T d1v3va2 105 NVGGE-FLNTVLSQMKDFGKIAI 126 (182)
T ss_dssp SSCHH-HHHHHGGGEEEEEEEEE
T ss_pred ecCch-hhhhhhhhccCCCeEEe
Confidence 99632 23333344444434443
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=86.25 E-value=0.84 Score=46.55 Aligned_cols=73 Identities=18% Similarity=0.192 Sum_probs=48.4
Q ss_pred EEEEc-CchhHHHHHHHHHhCCCCeEEEEe-CCHHHHHHHHHHc----C-CeeEEE-----------------eecCCCC
Q psy12817 568 VLLLG-AGYVSRPLIEYLHRDENIHITLGS-LLKEDIDKVTNEF----G-RVEATL-----------------IDVNNGG 623 (1201)
Q Consensus 568 VLILG-AG~VG~~va~~La~~~~~~VtVad-R~~ekAe~La~~~----~-~v~~v~-----------------lDV~D~~ 623 (1201)
++|-| ++.+|+.+++.|++. +.+|.+.+ |+.++++++.+.+ + .+..++ .|+++
T Consensus 5 AlITGas~GIG~aiA~~la~~-Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~-- 81 (284)
T d1e7wa_ 5 ALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL-- 81 (284)
T ss_dssp EEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH--
T ss_pred EEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC--
Confidence 44557 689999999999987 57887765 5666676666543 2 233333 34655
Q ss_pred chHHHhhc-------cCCcEEEEcCCC
Q psy12817 624 SDNLSGLV-------RSADLVVSLLPY 643 (1201)
Q Consensus 624 ~e~L~elI-------~~~DVVIs~lP~ 643 (1201)
.+.+++++ ...|++||+...
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~ 108 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASS 108 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCc
Confidence 55666554 368999998753
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=85.97 E-value=1.1 Score=45.24 Aligned_cols=74 Identities=15% Similarity=0.214 Sum_probs=48.2
Q ss_pred EEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHc-----CCeeEEEeecCCCC---chHHHhh-------
Q psy12817 568 VLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE-DIDKVTNEF-----GRVEATLIDVNNGG---SDNLSGL------- 630 (1201)
Q Consensus 568 VLILG-AG~VG~~va~~La~~~~~~VtVadR~~e-kAe~La~~~-----~~v~~v~lDV~D~~---~e~L~el------- 630 (1201)
.+|-| ++.+|+.+++.|++. +.+|++.+|+.+ .++++++++ ......+.|..+ + .+.+.++
T Consensus 4 AlVTGas~GIG~aia~~la~~-G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 4 AVITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL-SSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp EEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-STTHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHHHHHhhcCCceEEEeccccc-chhHHHHHHHHHHHHHHH
Confidence 46678 688999999999997 579999998854 445555443 234455555543 1 1222222
Q ss_pred ccCCcEEEEcCCC
Q psy12817 631 VRSADLVVSLLPY 643 (1201)
Q Consensus 631 I~~~DVVIs~lP~ 643 (1201)
....|++||+...
T Consensus 82 ~g~iDilvnnAG~ 94 (266)
T d1mxha_ 82 FGRCDVLVNNASA 94 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCcc
Confidence 2358999998753
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=85.56 E-value=0.31 Score=48.54 Aligned_cols=36 Identities=6% Similarity=0.111 Sum_probs=31.5
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE 600 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e 600 (1201)
..+||+|||+|..|..+|..|++. +++|+|.+++.+
T Consensus 3 ~~~kV~IiGaG~aGl~~A~~L~~~-G~~v~v~Er~~~ 38 (265)
T d2voua1 3 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSPQ 38 (265)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 357999999999999999999987 689999998643
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.47 E-value=0.13 Score=50.78 Aligned_cols=79 Identities=14% Similarity=0.193 Sum_probs=49.1
Q ss_pred ccCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHH-HcCCeeEEEeecCCCCchHHHhhccCCcEEE
Q psy12817 562 TEESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDI-DKVTN-EFGRVEATLIDVNNGGSDNLSGLVRSADLVV 638 (1201)
Q Consensus 562 ~~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekA-e~La~-~~~~v~~v~lDV~D~~~e~L~elI~~~DVVI 638 (1201)
+.+.|+|+||| +.-||+|++..|.++ +..|++++.+-... .+-+. .........+.... .+.+++.+.++|+||
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~-gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lk~~~~~aDIvI 102 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLAND-GATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYS--EDLLKKCSLDSDVVI 102 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECC--HHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHC-CCEEEEeccccccccccccceeeeeeccccccccc--hhHHhhccccCCEEE
Confidence 35679999999 567899999999886 67888887542110 00000 00001111111122 456888888999999
Q ss_pred EcCCC
Q psy12817 639 SLLPY 643 (1201)
Q Consensus 639 s~lP~ 643 (1201)
+++|-
T Consensus 103 savG~ 107 (171)
T d1edza1 103 TGVPS 107 (171)
T ss_dssp ECCCC
T ss_pred EccCC
Confidence 99963
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=85.39 E-value=0.41 Score=48.44 Aligned_cols=30 Identities=17% Similarity=0.387 Sum_probs=25.9
Q ss_pred EEEEc-CchhHHHHHHHHHhCCCCeEEEEeC
Q psy12817 568 VLLLG-AGYVSRPLIEYLHRDENIHITLGSL 597 (1201)
Q Consensus 568 VLILG-AG~VG~~va~~La~~~~~~VtVadR 597 (1201)
|+|.| +|++|+.+++.|.+++..+|++.|+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~ 32 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEEC
Confidence 78999 8999999999999986557888873
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=85.31 E-value=0.41 Score=44.87 Aligned_cols=64 Identities=16% Similarity=0.165 Sum_probs=38.9
Q ss_pred EEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhhh
Q psy12817 198 IVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFASK 277 (1201)
Q Consensus 198 vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~~ 277 (1201)
+.|+|+||.|+.-++.+++- +....||+....+.+.+....+..+.. + ++
T Consensus 2 IgfIG~G~mg~~l~~~L~~~----------------~~~~~v~~R~~~~~~~l~~~~~~~~~~------~--------~~ 51 (153)
T d2i76a2 2 LNFVGTGTLTRFFLECLKDR----------------YEIGYILSRSIDRARNLAEVYGGKAAT------L--------EK 51 (153)
T ss_dssp CEEESCCHHHHHHHHTTC--------------------CCCEECSSHHHHHHHHHHTCCCCCS------S--------CC
T ss_pred EEEEeCcHHHHHHHHHHHhC----------------CCEEEEEeCChhhhcchhhcccccccc------h--------hh
Confidence 56999999998765544332 233468888888877777654442221 1 24
Q ss_pred cCCcCcEEEEceec
Q psy12817 278 IAPYASIIINGIYW 291 (1201)
Q Consensus 278 i~p~~DvlIn~~~w 291 (1201)
.+..+|+||.|+-.
T Consensus 52 ~~~~~DiVil~v~d 65 (153)
T d2i76a2 52 HPELNGVVFVIVPD 65 (153)
T ss_dssp CCC---CEEECSCT
T ss_pred hhccCcEEEEeccc
Confidence 67789999999853
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=85.13 E-value=0.3 Score=48.01 Aligned_cols=32 Identities=19% Similarity=0.176 Sum_probs=28.9
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL 598 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~ 598 (1201)
|+|+|||+|..|-.+|.+|++. +++|+|..++
T Consensus 1 m~V~IIGaG~aGL~aA~~L~~~-G~~V~vlE~~ 32 (347)
T d2ivda1 1 MNVAVVGGGISGLAVAHHLRSR-GTDAVLLESS 32 (347)
T ss_dssp CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCCEEEEecC
Confidence 6899999999999999999987 5799999875
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.08 E-value=0.48 Score=45.38 Aligned_cols=89 Identities=11% Similarity=0.043 Sum_probs=53.6
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhh
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFA 275 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~ 275 (1201)
-+|+|+|+|.+|+-|++.++.+|+ ++.+.+....+.+..++ .|.... .++.+.+ .+.
T Consensus 29 ~~vlI~GaG~vG~~a~q~ak~~G~----------------~vi~~~~~~~k~~~a~~-lGa~~~-i~~~~~~-----~~~ 85 (168)
T d1piwa2 29 KKVGIVGLGGIGSMGTLISKAMGA----------------ETYVISRSSRKREDAMK-MGADHY-IATLEEG-----DWG 85 (168)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC----------------EEEEEESSSTTHHHHHH-HTCSEE-EEGGGTS-----CHH
T ss_pred CEEEEECCCCcchhHHHHhhhccc----------------cccccccchhHHHHhhc-cCCcEE-eeccchH-----HHH
Confidence 579999999999999999999994 45556666666665544 564211 1111111 223
Q ss_pred hhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 276 SKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 276 ~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
++.....|++|.|+.-.... +-++.-++++|+
T Consensus 86 ~~~~~~~d~vi~~~~~~~~~----~~~~~~~~l~~~ 117 (168)
T d1piwa2 86 EKYFDTFDLIVVCASSLTDI----DFNIMPKAMKVG 117 (168)
T ss_dssp HHSCSCEEEEEECCSCSTTC----CTTTGGGGEEEE
T ss_pred HhhhcccceEEEEecCCccc----hHHHHHHHhhcc
Confidence 34555679999986533211 112233347887
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=84.96 E-value=0.3 Score=49.27 Aligned_cols=32 Identities=19% Similarity=0.368 Sum_probs=28.8
Q ss_pred eEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 567 NVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 567 KVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
.|+|||+|.+|..+|.+|+++ +.+|+|.+++.
T Consensus 6 DvvIIGaGi~Gls~A~~La~~-G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKE-NKNTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 499999999999999999997 47999999863
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=84.90 E-value=0.53 Score=42.49 Aligned_cols=35 Identities=14% Similarity=0.216 Sum_probs=30.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
..++|+|+|+|++|--+|..|.+. +.+||++.|..
T Consensus 21 ~p~~v~IiGgG~ig~E~A~~l~~~-G~~Vtlve~~~ 55 (117)
T d1ebda2 21 VPKSLVVIGGGYIGIELGTAYANF-GTKVTILEGAG 55 (117)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred cCCeEEEECCCccceeeeeeeccc-ccEEEEEEecc
Confidence 358999999999999999999987 58899987653
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=84.57 E-value=1 Score=44.11 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=22.7
Q ss_pred CeEEEEEc-CcHHHHHHHHHHhhCCCc
Q psy12817 195 PLTIVFTG-SGNVSQGAQEIFQELPYE 220 (1201)
Q Consensus 195 P~~vvv~G-~G~vg~GAi~~a~~Lg~~ 220 (1201)
--+|+|.| +|-||.-|+++++.+|++
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~Ga~ 58 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKRGYT 58 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHTTCC
T ss_pred CCEEEEEeccchHHHHHHHHHHHcCCc
Confidence 35699999 699999999999999964
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.54 E-value=0.45 Score=47.01 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=30.3
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL 598 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~ 598 (1201)
.+..||+|||+|..|-.+|..|++. +++|+|...+
T Consensus 3 ~~~~kViVIGaG~aGL~aA~~L~~~-G~~V~VlEa~ 37 (449)
T d2dw4a2 3 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEAR 37 (449)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCC
Confidence 4568999999999999999999987 5799998654
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=84.35 E-value=0.38 Score=45.62 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=28.7
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
.||+|||+|..|-.+|.+|++.+-.+|+|..++.
T Consensus 1 P~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 1 PRVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 3799999999999999999987433699998753
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=84.31 E-value=0.34 Score=49.89 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=29.4
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
.+|+|||+|.+|..+|.+|++++..+|+|.+++.
T Consensus 2 ~dViIIGaGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3799999999999999999988545799998863
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=84.20 E-value=0.22 Score=50.59 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=31.0
Q ss_pred CCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHH
Q psy12817 564 ESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKE 600 (1201)
Q Consensus 564 ~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~e 600 (1201)
+.|+|+|.| +|.+|+.+++.|+++ +++|.+++++..
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~-G~~V~~~~~~~~ 37 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRAR-NWWVASIDVVEN 37 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 358999999 689999999999986 688998988754
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.07 E-value=0.85 Score=44.77 Aligned_cols=74 Identities=19% Similarity=0.235 Sum_probs=51.7
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
.+.|+|+|+| +..+|++++..|.++ +..|++++.. ...+.+.++++|+||++.
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~-gatVt~~~~~-------------------------t~~l~~~~~~aDivi~a~ 90 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWN-NATVTTCHSK-------------------------TAHLDEEVNKGDILVVAT 90 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTT-------------------------CSSHHHHHTTCSEEEECC
T ss_pred cccceEEEEecCCccchHHHHHHHhc-cCceEEEecc-------------------------cccHHHHHhhccchhhcc
Confidence 5679999999 567999999999886 5677776542 123556677899999998
Q ss_pred CCcccHHHHHHHHHcCCeEEEcc
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~S 664 (1201)
+-.-- +-...++.|+-++|..
T Consensus 91 G~~~~--i~~~~vk~g~iviDvg 111 (170)
T d1a4ia1 91 GQPEM--VKGEWIKPGAIVIDCG 111 (170)
T ss_dssp CCTTC--BCGGGSCTTCEEEECC
T ss_pred ccccc--cccccccCCCeEeccC
Confidence 53210 1133456677777764
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=83.79 E-value=0.28 Score=50.08 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=30.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHH
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKE 600 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~~~~~VtVadR~~e 600 (1201)
.+|+|+|+|.+|..+|..|.+. +++|+|.++.++
T Consensus 3 ~~V~IvGaGp~Gl~~A~~L~~~-G~~v~vlE~~~~ 36 (292)
T d1k0ia1 3 TQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQTP 36 (292)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSCH
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 3899999999999999999987 579999998764
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=83.47 E-value=0.71 Score=45.23 Aligned_cols=72 Identities=21% Similarity=0.267 Sum_probs=50.2
Q ss_pred cCCCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhccCCcEEEEcC
Q psy12817 563 EESRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVRSADLVVSLL 641 (1201)
Q Consensus 563 ~~mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~~~DVVIs~l 641 (1201)
...|+|+|+| +..+|++++..|.++ +..|+++... ...+.+.++++|+||+++
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~-gatVt~~h~~-------------------------t~~l~~~~~~ADivI~a~ 88 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLA-GCTTTVTHRF-------------------------TKNLRHHVENADLLIVAV 88 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTT-TCEEEEECSS-------------------------CSCHHHHHHHCSEEEECS
T ss_pred cccceEEEEeccccccHHHHHHHHHh-hccccccccc-------------------------cchhHHHHhhhhHhhhhc
Confidence 5579999999 667999999999876 5678877532 124566677899999998
Q ss_pred C--CcccHHHHHHHHHcCCeEEEcc
Q psy12817 642 P--YNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 642 P--~~~h~~VakacIeaGkh~VD~S 664 (1201)
+ ..+... -++.|.-++|..
T Consensus 89 G~p~~i~~~----~vk~g~vvIDvG 109 (166)
T d1b0aa1 89 GKPGFIPGD----WIKEGAIVIDVG 109 (166)
T ss_dssp CCTTCBCTT----TSCTTCEEEECC
T ss_pred cCccccccc----ccCCCcEEEecC
Confidence 4 333222 245666677753
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=83.37 E-value=0.59 Score=44.37 Aligned_cols=97 Identities=15% Similarity=0.187 Sum_probs=57.2
Q ss_pred CCeEEEEEcC-cHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccc
Q psy12817 194 GPLTIVFTGS-GNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRS 272 (1201)
Q Consensus 194 ~P~~vvv~G~-G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s 272 (1201)
+|++|+|+|+ |-||+.-++++.++.|.+++ +..++.. +..|..... .+++....
T Consensus 1 q~mnVaIvGATGyvG~eli~lL~~~~hP~~~---l~~~~s~------------------~~~Gk~i~~----~~~~~~~~ 55 (144)
T d2hjsa1 1 QPLNVAVVGATGSVGEALVGLLDERDFPLHR---LHLLASA------------------ESAGQRMGF----AESSLRVG 55 (144)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSC---EEEEECT------------------TTTTCEEEE----TTEEEECE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCceE---EEEEeec------------------ccCCcceee----ccccchhc
Confidence 3889999996 99999999999876655442 2211110 011211110 11111111
Q ss_pred hhhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCC
Q psy12817 273 LFASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADP 339 (1201)
Q Consensus 273 ~f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~ 339 (1201)
.........+|+++.|. |.=.+.+.+..+.+.| ..|+|.|.|-
T Consensus 56 ~~~~~~~~~~d~vf~a~------p~~~s~~~~~~~~~~g------------------~~VID~Ss~f 98 (144)
T d2hjsa1 56 DVDSFDFSSVGLAFFAA------AAEVSRAHAERARAAG------------------CSVIDLSGAL 98 (144)
T ss_dssp EGGGCCGGGCSEEEECS------CHHHHHHHHHHHHHTT------------------CEEEETTCTT
T ss_pred cchhhhhccceEEEecC------CcchhhhhccccccCC------------------ceEEeechhh
Confidence 11112244689988774 6666778777777777 6799999884
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=83.26 E-value=0.66 Score=42.50 Aligned_cols=35 Identities=26% Similarity=0.485 Sum_probs=30.2
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL 598 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~ 598 (1201)
.+.++|+|+|+|++|--+|..|.+. +.+|+++.+.
T Consensus 28 ~~~k~vvViGgG~iG~E~A~~l~~~-g~~Vtlie~~ 62 (123)
T d1nhpa2 28 PEVNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDIL 62 (123)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred cCCCEEEEECChHHHHHHHHHhhcc-ceEEEEEEec
Confidence 3468999999999999999999987 5789998664
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=82.97 E-value=0.61 Score=42.25 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=29.9
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
.+||+|+|+|++|--+|..|.+. +.+|+++.|..
T Consensus 21 p~~vvIiGgG~ig~E~A~~l~~~-G~~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGAGYIGVELGGVINGL-GAKTHLFEMFD 54 (116)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCEEEEECCChhhHHHHHHhhcc-ccEEEEEeecc
Confidence 58999999999999999999887 57999998753
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=82.93 E-value=0.61 Score=42.79 Aligned_cols=35 Identities=17% Similarity=0.338 Sum_probs=30.3
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
..++|+|+|+|++|--+|..|.+. +.+|+++.+..
T Consensus 29 ~~~~vvIIGgG~iG~E~A~~l~~~-g~~Vtli~~~~ 63 (121)
T d1d7ya2 29 PQSRLLIVGGGVIGLELAATARTA-GVHVSLVETQP 63 (121)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred cCCeEEEECcchhHHHHHHHhhcc-cceEEEEeecc
Confidence 358999999999999999999987 68899987653
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=82.77 E-value=1.3 Score=43.38 Aligned_cols=73 Identities=18% Similarity=0.206 Sum_probs=47.6
Q ss_pred CCCeEEEEcC-chhHHHHHHHHHhCC------CCeEEEEeCCH--HHHHHHHHHc-----CCeeEEEeecCCCCchHHHh
Q psy12817 564 ESRNVLLLGA-GYVSRPLIEYLHRDE------NIHITLGSLLK--EDIDKVTNEF-----GRVEATLIDVNNGGSDNLSG 629 (1201)
Q Consensus 564 ~mkKVLILGA-G~VG~~va~~La~~~------~~~VtVadR~~--ekAe~La~~~-----~~v~~v~lDV~D~~~e~L~e 629 (1201)
+..||.|+|| |.||..++-.|+... ...+.+.|.+. +.++.++-+. +....+. +. ....+
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~--~~----~~~~~ 96 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IG----IDPYE 96 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EE----SCHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcc--cc----ccchh
Confidence 3569999995 999999999988632 23567777655 3455554322 2222222 22 24566
Q ss_pred hccCCcEEEEcCC
Q psy12817 630 LVRSADLVVSLLP 642 (1201)
Q Consensus 630 lI~~~DVVIs~lP 642 (1201)
.++++|+||.+..
T Consensus 97 ~~~~aDvVvi~ag 109 (175)
T d7mdha1 97 VFEDVDWALLIGA 109 (175)
T ss_dssp HTTTCSEEEECCC
T ss_pred hccCCceEEEeec
Confidence 7789999999984
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=82.75 E-value=1.6 Score=47.11 Aligned_cols=90 Identities=12% Similarity=-0.003 Sum_probs=54.3
Q ss_pred CeEEEEEcCcHHHHHHHH-HHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccch
Q psy12817 195 PLTIVFTGSGNVSQGAQE-IFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSL 273 (1201)
Q Consensus 195 P~~vvv~G~G~vg~GAi~-~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~ 273 (1201)
+.++.|+|+|.-+..-++ +..-+|+ ..+.||+....+.+.+.+.....+.- +. +.. .
T Consensus 128 a~~l~iiG~G~QA~~~~~a~~~v~~i---------------~~V~v~~r~~~~~~~~~~~l~~~~g~-~v----~~~--~ 185 (340)
T d1x7da_ 128 ARKMALIGNGAQSEFQALAFHKHLGI---------------EEIVAYDTDPLATAKLIANLKEYSGL-TI----RRA--S 185 (340)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHSCC---------------CEEEEECSSHHHHHHHHHHHTTCTTC-EE----EEC--S
T ss_pred CceEEEEcccHHHHHHHHHHhhhcce---------------eeeEEEecChHHHHHHHHhhhhccCC-Cc----eec--C
Confidence 568999999998875444 4445553 36789998877766665543221110 00 001 1
Q ss_pred hhhhcCCcCcEEEEceecCCCCCcccCHHHHhcccCCC
Q psy12817 274 FASKIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPN 311 (1201)
Q Consensus 274 f~~~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg 311 (1201)
-.++.+..+|||++|..-+...| +++.++ +|||
T Consensus 186 s~~eav~~ADIi~t~Tas~s~~P-v~~~~~----l~pG 218 (340)
T d1x7da_ 186 SVAEAVKGVDIITTVTADKAYAT-IITPDM----LEPG 218 (340)
T ss_dssp SHHHHHTTCSEEEECCCCSSEEE-EECGGG----CCTT
T ss_pred CHHHHHhcCCceeeccccCCCCc-ccchhh----cCCC
Confidence 12356778999998875434455 566554 7888
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=82.51 E-value=0.89 Score=43.09 Aligned_cols=98 Identities=9% Similarity=0.043 Sum_probs=56.3
Q ss_pred EEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhh
Q psy12817 197 TIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFAS 276 (1201)
Q Consensus 197 ~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~ 276 (1201)
+|+|+|.|..|..-...+++-|.. ..+..||......++... .+. .+. +......
T Consensus 3 ~I~IIG~G~mG~sla~~L~~~g~~--------------~~I~~~D~~~~~~~~a~~-~~~-~~~---------~~~~~~~ 57 (171)
T d2g5ca2 3 NVLIVGVGFMGGSFAKSLRRSGFK--------------GKIYGYDINPESISKAVD-LGI-IDE---------GTTSIAK 57 (171)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCC--------------SEEEEECSCHHHHHHHHH-TTS-CSE---------EESCGGG
T ss_pred EEEEEccCHHHHHHHHHHHhcCCC--------------eEEEEEECChHHHHHHHH-hhc-chh---------hhhhhhh
Confidence 589999999999877777776632 234445555555555443 231 221 1111222
Q ss_pred hcCCcCcEEEEceecCCCCCcccCHHHHhcccCCCCCCCCCCCCCCCCCCCceeEEEeeccCCC
Q psy12817 277 KIAPYASIIINGIYWAVGSPKLLTLPDAKNLLRPNHMPWLPTSDGAPPLPHRLLGICDISADPG 340 (1201)
Q Consensus 277 ~i~p~~DvlIn~~~w~~~~PrLIT~e~v~~lmkpg~~~~~~~~~~~~~~p~rlsvIvDIS~D~G 340 (1201)
.....+|+||-|+-... ...++ +++...++++ .+|+|++.=.+
T Consensus 58 ~~~~~~dlIila~p~~~-~~~vl--~~l~~~~~~~------------------~ii~d~~s~k~ 100 (171)
T d2g5ca2 58 VEDFSPDFVMLSSPVRT-FREIA--KKLSYILSED------------------ATVTDQGSVKG 100 (171)
T ss_dssp GGGTCCSEEEECSCHHH-HHHHH--HHHHHHSCTT------------------CEEEECCSCCT
T ss_pred hhccccccccccCCchh-hhhhh--hhhhcccccc------------------ccccccccccH
Confidence 23446899998876432 11122 3455556777 78998875433
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.34 E-value=0.65 Score=42.52 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=30.4
Q ss_pred CCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 564 ESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 564 ~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
..+|++|+|+|++|--+|..|.+. +.+|+++.+..
T Consensus 22 ~p~~~vIiG~G~ig~E~A~~l~~l-G~~Vtii~~~~ 56 (122)
T d1v59a2 22 IPKRLTIIGGGIIGLEMGSVYSRL-GSKVTVVEFQP 56 (122)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCCeEEEECCCchHHHHHHHHHhh-CcceeEEEecc
Confidence 358999999999999999999987 68999987753
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=81.98 E-value=0.69 Score=42.13 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=29.5
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCC
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLL 598 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~ 598 (1201)
.+||+|+|+|.+|--+|..|.+. +.+|+++.|.
T Consensus 22 p~~v~IiGgG~iG~E~A~~l~~~-g~~Vtlv~~~ 54 (117)
T d1onfa2 22 SKKIGIVGSGYIAVELINVIKRL-GIDSYIFARG 54 (117)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT-TCEEEEECSS
T ss_pred CCEEEEECCchHHHHHHHHHHhc-cccceeeehh
Confidence 68999999999999999999876 6789999874
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=81.97 E-value=0.78 Score=43.24 Aligned_cols=77 Identities=14% Similarity=0.208 Sum_probs=43.5
Q ss_pred eEEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhh--HHHhcCCcccccccccCcccccch
Q psy12817 196 LTIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNY--LERIKGGGYDYQEYNENPSLYRSL 273 (1201)
Q Consensus 196 ~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~--~e~~~gg~f~~~ey~~~pe~y~s~ 273 (1201)
+||.|+|+|+||......+...|. .+....||..-.+.+- +.-.+...| ..++......
T Consensus 1 mKI~IIGaG~VG~~~a~~l~~~~l--------------~~el~L~Di~~~~~~g~~~Dl~~~~~~-----~~~~~~~~~~ 61 (140)
T d1a5za1 1 MKIGIVGLGRVGSSTAFALLMKGF--------------AREMVLIDVDKKRAEGDALDLIHGTPF-----TRRANIYAGD 61 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--------------CSEEEEECSSHHHHHHHHHHHHHHGGG-----SCCCEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC--------------CCEEEEEecccccccchhccccccccc-----cccccccCCc
Confidence 589999999999987666655442 1345667654332211 000111122 2233333333
Q ss_pred hhhhcCCcCcEEEEceecCC
Q psy12817 274 FASKIAPYASIIINGIYWAV 293 (1201)
Q Consensus 274 f~~~i~p~~DvlIn~~~w~~ 293 (1201)
+. -+..+|+||.|+..+.
T Consensus 62 ~~--~~~~adivvitag~~~ 79 (140)
T d1a5za1 62 YA--DLKGSDVVIVAAGVPQ 79 (140)
T ss_dssp GG--GGTTCSEEEECCCCCC
T ss_pred HH--HhcCCCEEEEeccccc
Confidence 32 3678999999998764
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=81.59 E-value=0.46 Score=49.76 Aligned_cols=34 Identities=12% Similarity=0.149 Sum_probs=30.1
Q ss_pred CCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCH
Q psy12817 565 SRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLK 599 (1201)
Q Consensus 565 mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ 599 (1201)
|.+|+|||||..|..+|+.|++. +.+|+|.+++.
T Consensus 1 M~dv~IIGaG~sGl~~A~~L~~~-g~~V~iiEk~~ 34 (298)
T d1i8ta1 1 MYDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRN 34 (298)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSS
T ss_pred CccEEEECCcHHHHHHHHHHHhC-CCcEEEEECCC
Confidence 78999999999999999999876 57899998753
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=81.59 E-value=0.87 Score=42.45 Aligned_cols=93 Identities=12% Similarity=0.157 Sum_probs=58.4
Q ss_pred CCCeEEEEcCch-----------hHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhcc
Q psy12817 564 ESRNVLLLGAGY-----------VSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLVR 632 (1201)
Q Consensus 564 ~mkKVLILGAG~-----------VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI~ 632 (1201)
..+||+|||+|. .+..+++.|.+. ++++++++.|++.... .+.-...+++.--. .+.+.+.++
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~-g~~~IliN~NPeTVst---d~d~aD~lYfeplt--~e~v~~Ii~ 76 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALRED-GYETIMVNCNPETVST---DYDTSDRLYFEPVT--LEDVLEIVR 76 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT-TCEEEEECCCTTSSTT---STTSSSEEECCCCS--HHHHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhc-CCeEEEEecChhhhhc---ChhhcCceEEccCC--HHHHHHHHH
Confidence 468999999983 344466666664 6899999999886531 12123334444333 566766654
Q ss_pred --CCcEEEEcCCCcccHHHHHHHHHcCCeEEE
Q psy12817 633 --SADLVVSLLPYNLHHHVAEFCIQHGKNLVT 662 (1201)
Q Consensus 633 --~~DVVIs~lP~~~h~~VakacIeaGkh~VD 662 (1201)
+.|.||-....+....+++..-+.|+.++-
T Consensus 77 ~E~p~~ii~~~GGQtalnla~~L~~~gv~iLG 108 (121)
T d1a9xa4 77 IEKPKGVIVQYGGQTPLKLARALEAAGVPVIG 108 (121)
T ss_dssp HHCCSEEECSSSTHHHHTTHHHHHHTTCCBCS
T ss_pred HhCCCEEEeehhhhhHHHHHHHHHHcCCcEEC
Confidence 689888777766555555555555555443
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=81.31 E-value=0.39 Score=45.97 Aligned_cols=66 Identities=14% Similarity=0.123 Sum_probs=43.7
Q ss_pred EEEEEcCcHHHHHHHHHHhhCCCcccCcccchhhhhcCCccEEEecchhHHhhHHHhcCCcccccccccCcccccchhhh
Q psy12817 197 TIVFTGSGNVSQGAQEIFQELPYEYVPPEMLQKVAEHGSNTKIYACEVRRRNYLERIKGGGYDYQEYNENPSLYRSLFAS 276 (1201)
Q Consensus 197 ~vvv~G~G~vg~GAi~~a~~Lg~~~V~~~dlr~~~~~ga~vkvy~~~~~~~~~~e~~~gg~f~~~ey~~~pe~y~s~f~~ 276 (1201)
+|.|+|.|+.|.+-..-+.+-| -.+.+|+....+.+.+.. .+.... .. ..
T Consensus 3 kIg~IGlG~MG~~iA~~L~~~g----------------~~v~~~d~~~~~~~~~~~-~~~~~~-----~~--------~~ 52 (162)
T d3cuma2 3 QIAFIGLGHMGAPMATNLLKAG----------------YLLNVFDLVQSAVDGLVA-AGASAA-----RS--------AR 52 (162)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT----------------CEEEEECSSHHHHHHHHH-TTCEEC-----SS--------HH
T ss_pred EEEEEEEHHHHHHHHHHHHHCC----------------CeEEEEECchhhhhhhhh-hhcccc-----ch--------hh
Confidence 6999999999997655554444 457888877666665554 232111 01 12
Q ss_pred hcCCcCcEEEEceecC
Q psy12817 277 KIAPYASIIINGIYWA 292 (1201)
Q Consensus 277 ~i~p~~DvlIn~~~w~ 292 (1201)
+.+..+|++|.|...+
T Consensus 53 e~~~~~diii~~v~~~ 68 (162)
T d3cuma2 53 DAVQGADVVISMLPAS 68 (162)
T ss_dssp HHHTSCSEEEECCSCH
T ss_pred hhccccCeeeecccch
Confidence 4566899999999766
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=81.29 E-value=0.72 Score=44.70 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=29.1
Q ss_pred CeEEEEcCchhHHHHHHHHHhC-CCCeEEEEeCCH
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRD-ENIHITLGSLLK 599 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~-~~~~VtVadR~~ 599 (1201)
|||+|||+|.+|-.+|..|.+. ++.+|++.+|..
T Consensus 1 ~KVvIIGgG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 6899999999999999999864 567899998753
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=81.17 E-value=0.38 Score=47.87 Aligned_cols=30 Identities=17% Similarity=0.242 Sum_probs=25.9
Q ss_pred CeEEEEEcCcHHHHHHHHHHhhCCCcccCc
Q psy12817 195 PLTIVFTGSGNVSQGAQEIFQELPYEYVPP 224 (1201)
Q Consensus 195 P~~vvv~G~G~vg~GAi~~a~~Lg~~~V~~ 224 (1201)
|++|+|+|+|.+|+-+...+++.|+..|..
T Consensus 1 ~~~V~IvGaG~aGl~~A~~L~~~Gi~~V~V 30 (288)
T d3c96a1 1 PIDILIAGAGIGGLSCALALHQAGIGKVTL 30 (288)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCeEEE
Confidence 899999999999999999999999643433
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=80.66 E-value=0.55 Score=46.48 Aligned_cols=34 Identities=12% Similarity=0.149 Sum_probs=29.5
Q ss_pred CeEEEEcCchhHHHHHHHHHhC-CCCeEEEEeCCH
Q psy12817 566 RNVLLLGAGYVSRPLIEYLHRD-ENIHITLGSLLK 599 (1201)
Q Consensus 566 kKVLILGAG~VG~~va~~La~~-~~~~VtVadR~~ 599 (1201)
.||+|||+|..|-.+|.+|.+. .+++|+|.++..
T Consensus 2 ~kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~ 36 (230)
T d1cjca2 2 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL 36 (230)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred CeEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 5999999999999999999864 467999998764
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.52 E-value=0.32 Score=47.88 Aligned_cols=27 Identities=22% Similarity=0.185 Sum_probs=24.7
Q ss_pred CCeEEEEEcCcHHHHHHHHHHhhCCCc
Q psy12817 194 GPLTIVFTGSGNVSQGAQEIFQELPYE 220 (1201)
Q Consensus 194 ~P~~vvv~G~G~vg~GAi~~a~~Lg~~ 220 (1201)
+|.+|+|+|+|.+|+.|...+.+.||+
T Consensus 1 rp~~VaVIGaGpaGL~aA~~L~~~G~~ 27 (239)
T d1lqta2 1 RPYYIAIVGSGPSAFFAAASLLKAADT 27 (239)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECcCHHHHHHHHHHHHcCCc
Confidence 489999999999999999999998864
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=80.40 E-value=0.9 Score=44.46 Aligned_cols=94 Identities=10% Similarity=0.057 Sum_probs=61.5
Q ss_pred CCeEEEEc-CchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHcCCeeEEEeecCCCCchHHHhhc--cCCcEEEEcC
Q psy12817 565 SRNVLLLG-AGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEFGRVEATLIDVNNGGSDNLSGLV--RSADLVVSLL 641 (1201)
Q Consensus 565 mkKVLILG-AG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~~~v~~v~lDV~D~~~e~L~elI--~~~DVVIs~l 641 (1201)
..+|+|.| +|.||..+++.+... +.+|+...++.++.+.+.+ . +... .+|-.+ ..++..... ++.|+|++++
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~-Ga~Viat~~s~~k~~~~~~-l-Ga~~-vi~~~~-~~~~~~~~~~~~gvD~vid~v 106 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV-L-GAKE-VLARED-VMAERIRPLDKQRWAAAVDPV 106 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH-T-TCSE-EEECC----------CCSCCEEEEEECS
T ss_pred CCEEEEEeccchHHHHHHHHHHHc-CCceEEecCchHHHHHHHh-c-ccce-eeecch-hHHHHHHHhhccCcCEEEEcC
Confidence 46899999 799999999887665 6788878888777765543 4 3332 234333 112222222 2589999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEcc
Q psy12817 642 PYNLHHHVAEFCIQHGKNLVTAS 664 (1201)
Q Consensus 642 P~~~h~~VakacIeaGkh~VD~S 664 (1201)
... +..-.-.|++.+-+++...
T Consensus 107 gg~-~~~~~l~~l~~~Griv~~G 128 (176)
T d1xa0a2 107 GGR-TLATVLSRMRYGGAVAVSG 128 (176)
T ss_dssp TTT-THHHHHHTEEEEEEEEECS
T ss_pred Cch-hHHHHHHHhCCCceEEEee
Confidence 744 4666777888888888874
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=80.32 E-value=2.5 Score=44.03 Aligned_cols=134 Identities=10% Similarity=0.059 Sum_probs=68.2
Q ss_pred cCCCeEEEEcCchhHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHc---------------CCeeEEEeecCCCCchHH
Q psy12817 563 EESRNVLLLGAGYVSRPLIEYLHRDENIHITLGSLLKEDIDKVTNEF---------------GRVEATLIDVNNGGSDNL 627 (1201)
Q Consensus 563 ~~mkKVLILGAG~VG~~va~~La~~~~~~VtVadR~~ekAe~La~~~---------------~~v~~v~lDV~D~~~e~L 627 (1201)
...++|||||.|.=+ +++.+.+.+..+|++++.+++-.+....-+ |+++.+..|+. +-+
T Consensus 71 ~~p~~vLiiG~G~G~--~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~----~~l 144 (276)
T d1mjfa_ 71 PKPKRVLVIGGGDGG--TVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGF----EFI 144 (276)
T ss_dssp SCCCEEEEEECTTSH--HHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHH----HHH
T ss_pred CCCceEEEecCCchH--HHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHH----HHH
Confidence 456899999977422 234445566668999999987655332211 34555444432 233
Q ss_pred HhhccCCcEEEEcCCCcccHHHHHHHHHcCCeEEEccCChHHHHHHHHHHHHcCCEEEeccccCchhHHHHHHHHHHHhh
Q psy12817 628 SGLVRSADLVVSLLPYNLHHHVAEFCIQHGKNLVTASYLSPEMMALHERAASAGITVLNEVGLDPGIDHLLAMECIDAAH 707 (1201)
Q Consensus 628 ~elI~~~DVVIs~lP~~~h~~VakacIeaGkh~VD~Syvs~e~~eLde~AkeAGVtil~e~GlDPGIdhmlA~~~idei~ 707 (1201)
++ -++.|+||.-++...... . + =|..+-.+.+.+.-+..|+.+++. | .|-...-....+.+.+.
T Consensus 145 ~~-~~~yDvIi~D~~~~~~~~--~-------~----L~t~eF~~~~~~~L~~~Gv~v~q~-~-s~~~~~~~~~~~~~tl~ 208 (276)
T d1mjfa_ 145 KN-NRGFDVIIADSTDPVGPA--K-------V----LFSEEFYRYVYDALNNPGIYVTQA-G-SVYLFTDELISAYKEMK 208 (276)
T ss_dssp HH-CCCEEEEEEECCCCC------------------TTSHHHHHHHHHHEEEEEEEEEEE-E-ETTTSHHHHHHHHHHHH
T ss_pred hc-cCCCCEEEEeCCCCCCCc--c-------c----ccCHHHHHhhHhhcCCCceEEEec-C-CcchhHHHHHHHHHHHH
Confidence 33 357899998765432210 0 0 022233444545555667777653 3 12221111223334454
Q ss_pred hcCCcEEEEEe
Q psy12817 708 LNGGKVESFVS 718 (1201)
Q Consensus 708 ~~ggkV~sf~s 718 (1201)
+.-..|..+..
T Consensus 209 ~~F~~v~~y~~ 219 (276)
T d1mjfa_ 209 KVFDRVYYYSF 219 (276)
T ss_dssp HHCSEEEEEEE
T ss_pred hhCCeeEEEEe
Confidence 44455555443
|