Psyllid ID: psy1296


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280---
EKIHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLFYGRGEDSSFPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISYWIVVDSVDRRGESMYIVEAV
ccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHEEEHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccHHHHcccccccEEHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHccccccc
ccccHHHHHHHHHHHHHHHHHEcccHHHEEHHHHHccccccccccccccccccccEEEcccccccccccccccccccccccccccHHHHHHHHHHHccccEEcccccHHHHHHcHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccc
EKIHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTanskqpeytassfvgilyctpiplfygrgedssfpilpswwcrwsfncfgmLDCVTKILQKEKIFGfykgmgaplvgvaplnalnyfgygtglkfftneknmGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQegglsnvysgpVDVIRKLIQQhglgsvfkGFSATLLRDVPAFGAYYAMYETVKHvfsgqgdsvievsdqtrkttplvgtitagsmAGISYWIVVDSVdrrgesmyIVEAV
EKIHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLFYGRGEDSSFPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVgtitagsmagiSYWIVVDSVDRRGESMYIVEAV
EKIHPFQFFlaggvggaltvlvgHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLFYGRGEDSSFPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISYWIVVDSVDRRGESMYIVEAV
***HPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLFYGRGEDSSFPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISYWIVVDSVDRRGESMYI****
**IHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANS********SFVGILYCTPIPLFYGRGEDSSFPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFT******Q*ELWQYFLSGSLGGIVTAALVAPGERIKCL****************DVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSG***************TPLVGTITAGSMAGISYWIVVDSVDRRGESMYI****
EKIHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLFYGRGEDSSFPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISYWIVVDSVDRRGESMYIVEAV
*KIHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLFYGRGEDSSFPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGD**********KTTPLVGTITAGSMAGISYWIVVDSVDRRGESMYIV***
oooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
ooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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EKIHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLFYGRGEDSSFPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISYWIVVDSVDRRGESMYIVEAV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query283 2.2.26 [Sep-21-2011]
Q27257312 Protein dif-1 OS=Caenorha yes N/A 0.766 0.695 0.394 4e-42
P97521301 Mitochondrial carnitine/a yes N/A 0.798 0.750 0.387 2e-40
Q9Z2Z6301 Mitochondrial carnitine/a yes N/A 0.798 0.750 0.383 2e-40
Q8HXY2301 Mitochondrial carnitine/a N/A N/A 0.798 0.750 0.387 1e-39
O43772301 Mitochondrial carnitine/a yes N/A 0.798 0.750 0.376 7e-39
Q9VQG4306 Congested-like trachea pr yes N/A 0.795 0.735 0.367 1e-36
Q08DK7298 Mitochondrial carnitine/a no N/A 0.727 0.691 0.299 8e-29
Q5HZE0306 Mitochondrial carnitine/a no N/A 0.727 0.673 0.284 8e-27
Q8N8R3303 Mitochondrial carnitine/a no N/A 0.727 0.679 0.291 2e-26
Q8BL03306 Mitochondrial carnitine/a no N/A 0.727 0.673 0.276 3e-25
>sp|Q27257|DIF1_CAEEL Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1 Back     alignment and function desciption
 Score =  171 bits (434), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/266 (39%), Positives = 143/266 (53%), Gaps = 49/266 (18%)

Query: 9   FLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLFYGRGEDSS 68
           F+AGGVGG+ TV+VGHPFDT KVR+QT    +P                      GE   
Sbjct: 8   FIAGGVGGSCTVIVGHPFDTVKVRIQTMPMPKP----------------------GEKPQ 45

Query: 69  FPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGL 128
           F               G LDCV + + KE  F  YKGM APLVGV+PL A+ + G   G 
Sbjct: 46  F--------------TGALDCVKRTVSKEGFFALYKGMAAPLVGVSPLFAVFFGGCAVG- 90

Query: 129 KFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNV---YSGPV 185
           K+        ++   Q   +G+L G+ T  ++ PGERIKCLLQVQ+ G +     Y GP+
Sbjct: 91  KWLQQTDPSQEMTFIQNANAGALAGVFTTIVMVPGERIKCLLQVQQAGSAGSGVHYDGPL 150

Query: 186 DVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRK 245
           DV++KL +Q G+ S+++G  ATLLRD+PA  AY ++YE +K  FSG+G          ++
Sbjct: 151 DVVKKLYKQGGISSIYRGTGATLLRDIPASAAYLSVYEYLKKKFSGEG---------AQR 201

Query: 246 TTPLVGTITAGSMAGISYWIVVDSVD 271
           T     T+ AG +AGI+ W V    D
Sbjct: 202 TLSPGATLMAGGLAGIANWGVCIPAD 227




Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation.
Caenorhabditis elegans (taxid: 6239)
>sp|P97521|MCAT_RAT Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus GN=Slc25a20 PE=1 SV=1 Back     alignment and function description
>sp|Q9Z2Z6|MCAT_MOUSE Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus GN=Slc25a20 PE=1 SV=1 Back     alignment and function description
>sp|Q8HXY2|MCAT_MACFA Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis GN=SLC25A20 PE=2 SV=1 Back     alignment and function description
>sp|O43772|MCAT_HUMAN Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1 Back     alignment and function description
>sp|Q9VQG4|COLT_DROME Congested-like trachea protein OS=Drosophila melanogaster GN=colt PE=2 SV=1 Back     alignment and function description
>sp|Q08DK7|MCATL_BOVIN Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1 Back     alignment and function description
>sp|Q5HZE0|MCATL_RAT Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Rattus norvegicus GN=Slc25a29 PE=2 SV=1 Back     alignment and function description
>sp|Q8N8R3|MCATL_HUMAN Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Homo sapiens GN=SLC25A29 PE=2 SV=2 Back     alignment and function description
>sp|Q8BL03|MCATL_MOUSE Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Mus musculus GN=Slc25a29 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query283
156547917295 PREDICTED: congested-like trachea protei 0.770 0.738 0.428 4e-46
91075930298 PREDICTED: similar to mitochondrial carn 0.770 0.731 0.398 4e-44
198246256299 mitochondrial carnitine/acylcarnitine tr 0.798 0.755 0.400 1e-43
348517090297 PREDICTED: mitochondrial carnitine/acylc 0.787 0.750 0.414 2e-43
350424766296 PREDICTED: congested-like trachea protei 0.770 0.736 0.383 1e-41
193641203305 PREDICTED: congested-like trachea protei 0.773 0.718 0.386 1e-41
357629861298 mitochondrial carnitine/acylcarnitine tr 0.795 0.755 0.393 1e-41
340724732296 PREDICTED: congested-like trachea protei 0.770 0.736 0.383 1e-41
256052253302 mitochondrial carnitine/acylcarnitine ca 0.791 0.741 0.402 1e-41
410898990298 PREDICTED: mitochondrial carnitine/acylc 0.787 0.748 0.4 1e-41
>gi|156547917|ref|XP_001604306.1| PREDICTED: congested-like trachea protein-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/266 (42%), Positives = 143/266 (53%), Gaps = 48/266 (18%)

Query: 1   EKIHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLF 60
           E + P ++FL+GG GG  T+L GHP DT KVRLQT                    PIP  
Sbjct: 3   ENVSPIKYFLSGGFGGVCTILAGHPLDTIKVRLQT-------------------MPIP-- 41

Query: 61  YGRGEDSSFPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALN 120
            G  E    P+    W           DC  K + KE   G YKGMGAPLVGVAP+ A++
Sbjct: 42  -GPNER---PLYAGTW-----------DCAKKTVSKEGFRGLYKGMGAPLVGVAPIFAMS 86

Query: 121 YFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNV 180
           + G+G G K    + N    EL Q F +G+  GI T A++APGERIKCLLQ+Q G     
Sbjct: 87  FLGFGLGKKLQQKDPNEKLTEL-QLFYAGAFSGIFTTAIMAPGERIKCLLQIQHGDAKPK 145

Query: 181 YSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVS 240
           Y GP+D I+KL  + GL S+FKG  ATLLRDVPA G Y+  YE ++     +  S+    
Sbjct: 146 YKGPIDCIKKLYAEGGLRSIFKGSCATLLRDVPASGVYFTTYEVLQRAMKSEDGSL---- 201

Query: 241 DQTRKTTPLVGTITAGSMAGISYWIV 266
                   L+ TITAG  AGI+ WIV
Sbjct: 202 -------GLLSTITAGGCAGIANWIV 220




Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91075930|ref|XP_967309.1| PREDICTED: similar to mitochondrial carnitine/acylcarnitine carrier protein [Tribolium castaneum] gi|270014645|gb|EFA11093.1| hypothetical protein TcasGA2_TC004690 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|198246256|gb|ACH82085.1| mitochondrial carnitine/acylcarnitine translocase [Loxostege sticticalis] Back     alignment and taxonomy information
>gi|348517090|ref|XP_003446068.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein-like [Oreochromis niloticus] Back     alignment and taxonomy information
>gi|350424766|ref|XP_003493905.1| PREDICTED: congested-like trachea protein-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|193641203|ref|XP_001950830.1| PREDICTED: congested-like trachea protein-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|357629861|gb|EHJ78379.1| mitochondrial carnitine/acylcarnitine translocase [Danaus plexippus] Back     alignment and taxonomy information
>gi|340724732|ref|XP_003400735.1| PREDICTED: congested-like trachea protein-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|256052253|ref|XP_002569689.1| mitochondrial carnitine/acylcarnitine carrier protein-related [Schistosoma mansoni] gi|353231218|emb|CCD77636.1| mitochondrial carnitine/acylcarnitine carrier protein-related [Schistosoma mansoni] Back     alignment and taxonomy information
>gi|410898990|ref|XP_003962980.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein-like [Takifugu rubripes] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query283
ZFIN|ZDB-GENE-040426-1869300 slc25a20 "solute carrier famil 0.607 0.573 0.420 3.2e-39
WB|WBGene00000996312 dif-1 [Caenorhabditis elegans 0.625 0.567 0.431 6.5e-39
UNIPROTKB|Q27257312 dif-1 "Protein dif-1" [Caenorh 0.625 0.567 0.431 6.5e-39
UNIPROTKB|Q66HP8301 Slc25a20 "Mitochondrial carnit 0.611 0.574 0.428 5.7e-38
MGI|MGI:1928738301 Slc25a20 "solute carrier famil 0.611 0.574 0.423 9.3e-38
RGD|621443301 Slc25a20 "solute carrier famil 0.611 0.574 0.423 9.3e-38
ZFIN|ZDB-GENE-090312-157296 si:dkey-150i13.2 "si:dkey-150i 0.628 0.601 0.411 9.3e-38
UNIPROTKB|Q3SZA4301 SLC25A20 "Uncharacterized prot 0.607 0.571 0.420 4e-37
UNIPROTKB|O43772301 SLC25A20 "Mitochondrial carnit 0.607 0.571 0.409 2.2e-36
UNIPROTKB|E2RSN2301 SLC25A20 "Uncharacterized prot 0.607 0.571 0.409 2.7e-36
ZFIN|ZDB-GENE-040426-1869 slc25a20 "solute carrier family 25 (carnitine/acylcarnitine translocase), member 20" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 371 (135.7 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
 Identities = 77/183 (42%), Positives = 111/183 (60%)

Query:    85 GMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELW- 143
             G  DC  K L KE + G YKGM AP++GV P+ A+ +FG+G G K    +K    +  + 
Sbjct:    53 GTFDCFKKTLAKEGVRGLYKGMAAPIIGVTPMFAVCFFGFGLGKKL--QQKTPDDILTYP 110

Query:   144 QYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKG 203
             Q F +G L G+ T A++APGERIKCLLQ+Q       Y+GP+D +++L ++ G+  ++KG
Sbjct:   111 QLFAAGMLSGVFTTAIMAPGERIKCLLQIQAASGQVKYAGPMDCVKQLYRESGIRGIYKG 170

Query:   204 FSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSMAGISY 263
              + TL+RDVPA G Y+  YE +KH  + +G S  E+S       P +  + AG MAGI  
Sbjct:   171 TALTLMRDVPASGMYFMTYEWLKHALTPEGKSPSELS------VPSI--LFAGGMAGIFN 222

Query:   264 WIV 266
             W V
Sbjct:   223 WAV 225


GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0006810 "transport" evidence=IEA
WB|WBGene00000996 dif-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q27257 dif-1 "Protein dif-1" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q66HP8 Slc25a20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1928738 Slc25a20 "solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621443 Slc25a20 "solute carrier family 25 (carnitine/acylcarnitine translocase), member 20" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090312-157 si:dkey-150i13.2 "si:dkey-150i13.2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZA4 SLC25A20 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O43772 SLC25A20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RSN2 SLC25A20 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q27257DIF1_CAEELNo assigned EC number0.39470.76670.6955yesN/A
Q93XM7MCAT_ARATHNo assigned EC number0.32230.75610.7133yesN/A
O43772MCAT_HUMANNo assigned EC number0.37630.79850.7508yesN/A
Q9Z2Z6MCAT_MOUSENo assigned EC number0.38370.79850.7508yesN/A
P97521MCAT_RATNo assigned EC number0.38740.79850.7508yesN/A
Q9VQG4COLT_DROMENo assigned EC number0.36760.79500.7352yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-25
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 9e-17
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-08
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 9e-08
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 95.0 bits (237), Expect = 7e-25
 Identities = 28/94 (29%), Positives = 45/94 (47%)

Query: 138 GQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGL 197
             L      L+G + G + A +  P + +K  LQ    G S  Y G +D  +K+ ++ G+
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGI 60

Query: 198 GSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSG 231
             ++KG    LLR  PA   Y+  YET+K +   
Sbjct: 61  RGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 283
KOG0752|consensus320 100.0
KOG0764|consensus299 100.0
KOG0753|consensus317 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758|consensus297 100.0
KOG0761|consensus361 100.0
KOG0762|consensus311 100.0
KOG0760|consensus302 100.0
KOG0754|consensus294 100.0
KOG0757|consensus319 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759|consensus286 100.0
KOG0752|consensus320 100.0
KOG0770|consensus353 100.0
KOG0753|consensus317 100.0
KOG0036|consensus463 100.0
KOG0769|consensus308 100.0
KOG0768|consensus323 100.0
KOG0766|consensus297 100.0
KOG0764|consensus299 100.0
KOG0751|consensus 694 100.0
KOG0765|consensus333 100.0
KOG0749|consensus298 100.0
KOG0757|consensus319 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0756|consensus299 100.0
KOG0759|consensus286 100.0
KOG0763|consensus301 100.0
KOG0755|consensus320 100.0
KOG0768|consensus323 100.0
KOG0750|consensus304 100.0
KOG0767|consensus333 100.0
KOG0760|consensus302 100.0
KOG0762|consensus311 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0758|consensus297 100.0
KOG0751|consensus694 99.97
KOG0754|consensus294 99.97
KOG0756|consensus299 99.96
KOG0761|consensus361 99.96
KOG0750|consensus304 99.95
KOG0765|consensus333 99.95
KOG0749|consensus298 99.95
KOG0036|consensus463 99.95
KOG0763|consensus301 99.94
KOG0766|consensus297 99.94
KOG0755|consensus320 99.94
KOG0770|consensus353 99.92
KOG2745|consensus321 99.91
KOG0769|consensus308 99.9
KOG0767|consensus333 99.89
KOG1519|consensus297 99.83
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.73
KOG1519|consensus297 99.64
KOG2954|consensus427 99.37
KOG2745|consensus321 99.29
KOG2954|consensus427 98.24
>KOG0752|consensus Back     alignment and domain information
Probab=100.00  E-value=7e-49  Score=336.89  Aligned_cols=229  Identities=23%  Similarity=0.387  Sum_probs=201.4

Q ss_pred             chhhHHHHHhHHHHhHhhhcCchhhhhhhhhccCCCCCCcccccccccccccCCccccccCCCCCCCCCccccccccCCC
Q psy1296           4 HPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLFYGRGEDSSFPILPSWWCRWSFNC   83 (283)
Q Consensus         4 ~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (283)
                      ..++.+++|++||+++..++.|||++|+|+|++.++..                                      ..+|
T Consensus        26 ~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~--------------------------------------~~k~   67 (320)
T KOG0752|consen   26 TGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSK--------------------------------------TSKY   67 (320)
T ss_pred             HHHHHHhcchHHHHHHHHhcCchhHceEEEEecccccc--------------------------------------cccc
Confidence            45678899999999999999999999999999985311                                      1123


Q ss_pred             CCHHHHHHHHHHhcCccccccCChHHHhhhhhhhhhhHHhHHHHHHhhcccccCCCcchHHHHHHhHHHHHHHHHhhCcH
Q psy1296          84 FGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQYFLSGSLGGIVTAALVAPG  163 (283)
Q Consensus        84 ~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~f~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~i~~Pl  163 (283)
                      .|+++.+++|+++||++|||||..++.++.+|+.+++|..||.++++....++....+...++++|++||+++.+++||+
T Consensus        68 ~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPL  147 (320)
T KOG0752|consen   68 PGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQFSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPL  147 (320)
T ss_pred             ccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhhhhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcH
Confidence            39999999999999999999999999999999999999999999986554443447788999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCcccccHHHHHHHHHHhhccccccccchhhhhhhhhhhhhHHHHHHHHHHh-hccCCCCccccccc
Q psy1296         164 ERIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHV-FSGQGDSVIEVSDQ  242 (283)
Q Consensus       164 e~vk~r~q~~~~~~~~~y~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~f~~ye~lk~~-~~~~~~~~~~~~~~  242 (283)
                      |++|+|+.++..  ...|+++++++++|+++||++|||||+.|++++..|+.++.|..||.+|++ +..... .++.+  
T Consensus       148 DlvRtRLa~q~~--~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~-~~~~~--  222 (320)
T KOG0752|consen  148 DLLRTRLAVQGE--LKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSG-NKELS--  222 (320)
T ss_pred             HHhhhheeeecc--cccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccc-cchhh--
Confidence            999999999875  237999999999999999999999999999999999999999999999996 333221 12223  


Q ss_pred             ccCCcchHHHHhhhHHHHHHHHhhccchhhHhhhhhhhc
Q psy1296         243 TRKTTPLVGTITAGSMAGISYWIVVDSVDRRGESMYIVE  281 (283)
Q Consensus       243 ~~~~~~~~~~~~~g~~a~~~~~~~t~Pldvvktr~q~~~  281 (283)
                            .+..+++|.+||+++..++||||+||+|||+.+
T Consensus       223 ------~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~  255 (320)
T KOG0752|consen  223 ------NFERLLCGALAGAVAQTITYPLDTVRRRMQLGG  255 (320)
T ss_pred             ------hHHHHHHHHHHHHHHhhhcccHHHHHHHHhccC
Confidence                  889999999999999999999999999999875



>KOG0764|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 8e-08
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 7/200 (3%) Query: 85 GMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQLELWQ 144 G++DCV +I +++ F++G A ++ P ALN+ + F + + + W+ Sbjct: 52 GIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHK-QFWR 110 Query: 145 YFL----SGSLGGIVTAALVAPGE--RIKCLLQVQEGGLSNVYSGPVDVIRKLIQQHGLG 198 YF SG G + V P + R + V +G ++G + I K+ + GL Sbjct: 111 YFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLR 170 Query: 199 SVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSVIEVSDQTRKTTPLVGTITAGSM 258 +++GF+ ++ + AY+ +Y+T K + + I VS +T V + + Sbjct: 171 GLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPF 230 Query: 259 AGISYWIVVDSVDRRGESMY 278 + +++ S + + MY Sbjct: 231 DTVRRRMMMQSGRKGADIMY 250

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-31
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-28
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-06
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-30
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 9e-21
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 3e-11
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  115 bits (291), Expect = 7e-31
 Identities = 51/269 (18%), Positives = 99/269 (36%), Gaps = 49/269 (18%)

Query: 1   EKIHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLF 60
           + +   + FLAGGV  A++     P +  K+ LQ  ++ +       + GI+        
Sbjct: 3   QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGII-------- 54

Query: 61  YGRGEDSSFPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALN 120
                                      DCV +I +++    F++G  A ++   P  ALN
Sbjct: 55  ---------------------------DCVVRIPKEQGFLSFWRGNLANVIRYFPTQALN 87

Query: 121 YFGYGTGLKFFTN---EKNMGQLELWQYFLSGSLGGIVTAALVAPGERIKCLLQVQ--EG 175
           +       + F                   SG   G  +   V P +  +  L     +G
Sbjct: 88  FAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG 147

Query: 176 GLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDS 235
                ++G  + I K+ +  GL  +++GF+ ++   +    AY+ +Y+T K +     + 
Sbjct: 148 AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNV 207

Query: 236 VIEVSDQTRKTTPLVGTITAGSMAG-ISY 263
            I VS        ++      ++AG +SY
Sbjct: 208 HIIVSW-------MIAQT-VTAVAGLVSY 228


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query283
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=3.1e-47  Score=333.24  Aligned_cols=233  Identities=20%  Similarity=0.310  Sum_probs=198.7

Q ss_pred             CCchhhHHHHHhHHHHhHhhhcCchhhhhhhhhccCCCCCCcccccccccccccCCccccccCCCCCCCCCccccccccC
Q psy1296           2 KIHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLFYGRGEDSSFPILPSWWCRWSF   81 (283)
Q Consensus         2 ~~~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (283)
                      +++.++++++|++||+++.++++|+|+||+|+|++......                                   ....
T Consensus         4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~-----------------------------------~~~~   48 (297)
T 1okc_A            4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI-----------------------------------SAEK   48 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSC-----------------------------------CGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhccccccc-----------------------------------cccc
Confidence            35678899999999999999999999999999997531100                                   0122


Q ss_pred             CCCCHHHHHHHHHHhcCccccccCChHHHhhhhhhhhhhHHhHHHHHHhhcc-cccCCC--cchHHHHHHhHHHHHHHHH
Q psy1296          82 NCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTN-EKNMGQ--LELWQYFLSGSLGGIVTAA  158 (283)
Q Consensus        82 ~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~f~~y~~~~~~~~~-~~~~~~--~~~~~~~~~g~~ag~~~~~  158 (283)
                      .|.+.++++++|+++||++|||||+.+++++.++.++++|++||.+|+.+.. .+....  ......+++|++||+++.+
T Consensus        49 ~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~  128 (297)
T 1okc_A           49 QYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLC  128 (297)
T ss_dssp             SCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHhccchhheecccHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHH
Confidence            3559999999999999999999999999999999999999999999995433 221111  2346789999999999999


Q ss_pred             hhCcHHHHHHHHhhccCC--CCcccccHHHHHHHHHHhhccccccccchhhhhhhhhhhhhHHHHHHHHHHhhccCCCCc
Q psy1296         159 LVAPGERIKCLLQVQEGG--LSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSV  236 (283)
Q Consensus       159 i~~Ple~vk~r~q~~~~~--~~~~y~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~f~~ye~lk~~~~~~~~~~  236 (283)
                      +++|+|+||+|||++...  ....|+++++++++|+++||++|||||+.+++++++++.+++|.+||.+|+.+.+..   
T Consensus       129 ~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~---  205 (297)
T 1okc_A          129 FVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK---  205 (297)
T ss_dssp             HHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG---
T ss_pred             HhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC---
Confidence            999999999999998542  346799999999999999999999999999999999999999999999999775421   


Q ss_pred             ccccccccCCcchHHHHhhhHHHHHHHHhhccchhhHhhhhhhhc
Q psy1296         237 IEVSDQTRKTTPLVGTITAGSMAGISYWIVVDSVDRRGESMYIVE  281 (283)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~t~Pldvvktr~q~~~  281 (283)
                       +        .+....+++|++||++++++++|+||||||||++.
T Consensus       206 -~--------~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~  241 (297)
T 1okc_A          206 -N--------VHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS  241 (297)
T ss_dssp             -C--------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             -C--------ccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcC
Confidence             1        12778899999999999999999999999999874



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 283
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-13
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-11
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 67.4 bits (163), Expect = 1e-13
 Identities = 52/283 (18%), Positives = 107/283 (37%), Gaps = 40/283 (14%)

Query: 1   EKIHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLF 60
           + +   + FLAGGV  A++     P +  K+ LQ  ++ +       +            
Sbjct: 2   QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQY------------ 49

Query: 61  YGRGEDSSFPILPSWWCRWSFNCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALN 120
                                   G++DCV +I +++    F++G  A ++   P  ALN
Sbjct: 50  -----------------------KGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALN 86

Query: 121 YFGYGTGLKFFTNEKNMGQ---LELWQYFLSGSLGGIVTAALVAPGERIKCLL--QVQEG 175
           +       + F    +  +           SG   G  +   V P +  +  L   V +G
Sbjct: 87  FAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG 146

Query: 176 GLSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDS 235
                ++G  + I K+ +  GL  +++GF+ ++   +    AY+ +Y+T K +     + 
Sbjct: 147 AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNV 206

Query: 236 VIEVSDQTRKTTPLVGTITAGSMAGISYWIVVDSVDRRGESMY 278
            I VS    +T   V  + +     +   +++ S  +  + MY
Sbjct: 207 HIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMY 249


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query283
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.3e-43  Score=307.01  Aligned_cols=234  Identities=20%  Similarity=0.308  Sum_probs=203.9

Q ss_pred             CCchhhHHHHHhHHHHhHhhhcCchhhhhhhhhccCCCCCCcccccccccccccCCccccccCCCCCCCCCccccccccC
Q psy1296           2 KIHPFQFFLAGGVGGALTVLVGHPFDTCKVRLQTANSKQPEYTASSFVGILYCTPIPLFYGRGEDSSFPILPSWWCRWSF   81 (283)
Q Consensus         2 ~~~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (283)
                      +++.++.+++|++||+++.+++||||+||+|+|++......                                   ....
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~-----------------------------------~~~~   47 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI-----------------------------------SAEK   47 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSC-----------------------------------CGGG
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCC-----------------------------------Cccc
Confidence            47889999999999999999999999999999997642110                                   1123


Q ss_pred             CCCCHHHHHHHHHHhcCccccccCChHHHhhhhhhhhhhHHhHHHHHHhhcccccCCC---cchHHHHHHhHHHHHHHHH
Q psy1296          82 NCFGMLDCVTKILQKEKIFGFYKGMGAPLVGVAPLNALNYFGYGTGLKFFTNEKNMGQ---LELWQYFLSGSLGGIVTAA  158 (283)
Q Consensus        82 ~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~f~~y~~~~~~~~~~~~~~~---~~~~~~~~~g~~ag~~~~~  158 (283)
                      .|+|+++++++++++||+++||+|+.+.+++..+...++|.+|+.+++.+.+......   ......+.+|.+|++++.+
T Consensus        48 ~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  127 (292)
T d1okca_          48 QYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLC  127 (292)
T ss_dssp             SCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHh
Confidence            3559999999999999999999999999999999999999999999999987653222   2245678899999999999


Q ss_pred             hhCcHHHHHHHHhhccCC--CCcccccHHHHHHHHHHhhccccccccchhhhhhhhhhhhhHHHHHHHHHHhhccCCCCc
Q psy1296         159 LVAPGERIKCLLQVQEGG--LSNVYSGPVDVIRKLIQQHGLGSVFKGFSATLLRDVPAFGAYYAMYETVKHVFSGQGDSV  236 (283)
Q Consensus       159 i~~Ple~vk~r~q~~~~~--~~~~y~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~f~~ye~lk~~~~~~~~~~  236 (283)
                      +++|+|++|+|+|.+...  ....|.+.++++++++++||+++||+|+.+++++++++.+++|..||.+|+.+.+.... 
T Consensus       128 ~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-  206 (292)
T d1okca_         128 FVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNV-  206 (292)
T ss_dssp             HHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGCS-
T ss_pred             hhhhhhhhheeeeccccccccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccccccc-
Confidence            999999999999998752  45678999999999999999999999999999999999999999999999977653221 


Q ss_pred             ccccccccCCcchHHHHhhhHHHHHHHHhhccchhhHhhhhhhhcc
Q psy1296         237 IEVSDQTRKTTPLVGTITAGSMAGISYWIVVDSVDRRGESMYIVEA  282 (283)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~t~Pldvvktr~q~~~~  282 (283)
                                 .....++++.++++++++++||+||||||||+++.
T Consensus       207 -----------~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~  241 (292)
T d1okca_         207 -----------HIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG  241 (292)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             -----------chHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCC
Confidence                       27889999999999999999999999999999864



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure