Psyllid ID: psy1304

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180----
Protein Sequence
MTGRITAVSLKPLLTQILFEGEYLIFSKGTVTAKVLSSRKQRKEDRIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKCT
Secondary Structure (PSIPRED)
ccccEEEEEEHHHHHHHHHcccEEEEEccEEEEEEEcccccccccccccccccccEEEEEEcEEEEEcccccccccEEEEEcccccccHHHHHccccccccccccccEEEEEcccHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHHHHHcccEEcc
Secondary Structure Prediction (SSPRO)
cccEEEEEccHHHHHHHHHcccEEEEEcccEEEEEEccccccccEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHccccccEEEEEcccHHHHHHcHccccEEEEEcccHHHHHHHHHHcEEEEEccccHHHccHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHHHHccccEcc
Coil and Loop (DISEMBL)
mtgritavslkpLLTQILFEGEYLIFSKGTVTAKVLSSRKqrkedrigesqpfrgqtlsvqdkirpgrgsnprpsaykadaptsnltrlgllgardclyrenliDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKthhvditgepyFMEYMQYEYNTRAQESEVQKCT
Flexible Loop (DISEMBL)
mtgritavslkpllTQILFEGEYLIFSKGTVTAKVlssrkqrkedrigesqpfrgqtlsvqdkirpgrgsnprpsaykadaptsnltrlGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNtraqesevqkct
Low Complexity Region (SEG)
MTGRITAVSLKPLLTQILFEGEYLIFSKGTVTAKVLSSRKQRKEDRIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKCT
Disordered region (IsUnstruct)
****ITAVSLKPLLTQILFEGEYLIFSKGTVTAKV**************************************************LTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYN************
Disordered Region (DISOPRED)
****I*AVSLKPLLTQILFEGEYLIFSKGTVTAKVLSSRKQRKEDRIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLL*********NLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKCT
Disordered Region (DISEMBL)
MTGRITAVSLKPLLTQILFEGEYLIFSKGTVT**********************GQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTR**********
Disordered Region (DISPRO)
*TGRITAVSLKPLLTQILFEGEYLIFSKGTVTAKVLSSRKQRKEDRIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESE*QKC*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTGRITAVSLKPLLTQILFEGEYLIFSKGTVTAKVLSSRKQRKEDRIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKCT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	184	2.2.26 [Sep-21-2011]
Q3T067	429	Saccharopine dehydrogenas	yes	N/A	0.413	0.177	0.513	5e-17
Q6AY30	429	Saccharopine dehydrogenas	yes	N/A	0.413	0.177	0.526	9e-17
Q8R127	429	Saccharopine dehydrogenas	yes	N/A	0.413	0.177	0.5	2e-16
Q8NBX0	429	Saccharopine dehydrogenas	yes	N/A	0.413	0.177	0.5	2e-16
Q5R5C9	429	Saccharopine dehydrogenas	yes	N/A	0.413	0.177	0.486	1e-15
Q8LGI2	454	Probable mitochondrial sa	yes	N/A	0.396	0.160	0.397	9e-12
Q7D745	419	Putative trans-acting eno	yes	N/A	0.472	0.207	0.375	1e-09
O53176	419	Putative trans-acting eno	yes	N/A	0.472	0.207	0.375	1e-09
P95139	418	Trans-acting enoyl reduct	yes	N/A	0.336	0.148	0.435	5e-09
A5U6W1	418	Trans-acting enoyl reduct	no	N/A	0.336	0.148	0.435	5e-09

>sp|Q3T067|SCPDL_BOVIN Saccharopine dehydrogenase-like oxidoreductase OS=Bos taurus GN=SCCPDH PE=2 SV=1

 Score = 87.0 bits (214), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 55/76 (72%)

Query: 105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFM 164
           ++ III D+ N +S+  MAK+  V+LNCVGPY +YGE V+KACIE  T  +DI+GEP F+
Sbjct: 71  EVGIIICDITNPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGTSCIDISGEPQFL 130

Query: 165 EYMQYEYNTRAQESEV 180
           E M ++Y+ +A E  V
Sbjct: 131 ELMYWKYHEKAAEKGV 146

Bos taurus (taxid: 9913)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q6AY30|SCPDL_RAT Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus GN=Sccpdh PE=2 SV=1

 Score = 86.7 bits (213), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 53/76 (69%)

Query: 105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFM 164
           ++ III D+ N +S+  MAKK  ++LNCVGPY +YGE VVKACIE  T  +DI GEP F+
Sbjct: 71  EVGIIICDISNPASLDEMAKKATLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEPQFL 130

Query: 165 EYMQYEYNTRAQESEV 180
           E M  +Y+ +A E  V
Sbjct: 131 ELMHVKYHEKAAEKGV 146

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8R127|SCPDL_MOUSE Saccharopine dehydrogenase-like oxidoreductase OS=Mus musculus GN=Sccpdh PE=2 SV=1

 Score = 85.5 bits (210), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 54/76 (71%)

Query: 105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFM 164
           ++ +II D+ N +S+  MAK+ +++LNCVGPY +YGE VVKACIE  T  +DI GEP F+
Sbjct: 71  EVGVIICDISNPASLDEMAKQAKLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEPQFL 130

Query: 165 EYMQYEYNTRAQESEV 180
           E M  +Y+ +A E  V
Sbjct: 131 ELMHAKYHEKAAEKGV 146

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8NBX0|SCPDL_HUMAN Saccharopine dehydrogenase-like oxidoreductase OS=Homo sapiens GN=SCCPDH PE=1 SV=1

 Score = 85.5 bits (210), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 54/76 (71%)

Query: 105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFM 164
           ++ III D+ N +S+  MAK+  V+LNCVGPY +YGE V+KACIE     +DI+GEP F+
Sbjct: 71  EVGIIICDIANPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGASCIDISGEPQFL 130

Query: 165 EYMQYEYNTRAQESEV 180
           E MQ +Y+ +A +  V
Sbjct: 131 ELMQLKYHEKAADKGV 146

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q5R5C9|SCPDL_PONAB Saccharopine dehydrogenase-like oxidoreductase OS=Pongo abelii GN=SCCPDH PE=2 SV=1

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 53/76 (69%)

Query: 105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFM 164
           ++ III D+ N +S+  MAK+  V+ NCVGPY +YGE V+KACIE     +DI+GEP F+
Sbjct: 71  EVGIIICDIANPASLDEMAKQATVVPNCVGPYRFYGEPVIKACIENGASCIDISGEPQFL 130

Query: 165 EYMQYEYNTRAQESEV 180
           E MQ +Y+ +A +  V
Sbjct: 131 ELMQLKYHEKAADKGV 146

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8LGI2|SCPDL_ARATH Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Arabidopsis thaliana GN=At5g39410 PE=1 SV=2

 Score = 69.7 bits (169), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 49/73 (67%)

Query: 106 IPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFME 165
           + I+ AD  +  S+  +  + ++ILNCVGP+  +G+ VV AC ++   ++DI+GEP FME
Sbjct: 72  VAILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYLDISGEPEFME 131

Query: 166 YMQYEYNTRAQES 178
            M+  Y+ RA+E+
Sbjct: 132 RMEANYHDRAEET 144

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q7D745|Y2525_MYCTU Putative trans-acting enoyl reductase MT2525 OS=Mycobacterium tuberculosis GN=MT2525 PE=3 SV=2

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)

Query: 91  LLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEA 150
           +L  R+ L  E+    PI+ AD    S++  MA + +V++  VGPYT YG  +V AC  A
Sbjct: 46  VLAVREAL-GESAQTWPILTADASLPSTLQAMAARAQVVVTTVGPYTRYGLPLVAACAAA 104

Query: 151 KTHHVDITGEPYFMEYMQYEYNTRAQES 178
            T + D+TGEP FM      Y+ +A ++
Sbjct: 105 GTDYADLTGEPMFMRNSIDLYHKQAADT 132

Mycobacterium tuberculosis (taxid: 1773)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|O53176|Y2449_MYCTU Putative trans-acting enoyl reductase Rv2449c OS=Mycobacterium tuberculosis GN=Rv2449c PE=1 SV=3

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)

Query: 91  LLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEA 150
           +L  R+ L  E+    PI+ AD    S++  MA + +V++  VGPYT YG  +V AC  A
Sbjct: 46  VLAVREAL-GESAQTWPILTADASLPSTLQAMAARAQVVVTTVGPYTRYGLPLVAACAAA 104

Query: 151 KTHHVDITGEPYFMEYMQYEYNTRAQES 178
            T + D+TGEP FM      Y+ +A ++
Sbjct: 105 GTDYADLTGEPMFMRNSIDLYHKQAADT 132

Mycobacterium tuberculosis (taxid: 1773)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P95139|TAER_MYCTU Trans-acting enoyl reductase OS=Mycobacterium tuberculosis GN=Rv2953 PE=1 SV=1

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 38/62 (61%)

Query: 102 NLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP 161
           N  D P+I+AD     ++  MA + +V+L  VGPYT YG  +V AC +A T + D+TGE 
Sbjct: 56  NAADWPLILADASQPLTLEAMAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGEL 115

Query: 162 YF 163
            F
Sbjct: 116 MF 117

Involved in the reduction of the double bond between C-4 and C-5 during phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) biosynthesis.

Mycobacterium tuberculosis (taxid: 1773)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|A5U6W1|TAER_MYCTA Trans-acting enoyl reductase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_2980 PE=3 SV=1

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 38/62 (61%)

Query: 102 NLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP 161
           N  D P+I+AD     ++  MA + +V+L  VGPYT YG  +V AC +A T + D+TGE 
Sbjct: 56  NAADWPLILADASQPLTLEAMAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGEL 115

Query: 162 YF 163
            F
Sbjct: 116 MF 117

Involved in the reduction of the double bond between C-4 and C-5 during phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) biosynthesis.

Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) (taxid: 419947)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
289739645	427	putative saccharopine dehydrogenase [Glo	0.434	0.187	0.6	2e-23
195451958	430	GK13975 [Drosophila willistoni] gi|19416	0.440	0.188	0.604	3e-23
195055899	431	GH13859 [Drosophila grimshawi] gi|193892	0.440	0.187	0.592	9e-23
158290701	430	AGAP002652-PA [Anopheles gambiae str. PE	0.434	0.186	0.6	1e-22
198450546	612	GA18705 [Drosophila pseudoobscura pseudo	0.440	0.132	0.580	4e-22
195453709	434	GK14366 [Drosophila willistoni] gi|19416	0.440	0.186	0.580	4e-22
194742644	433	GF17952 [Drosophila ananassae] gi|190626	0.467	0.198	0.539	9e-22
237651917	215	saccharopine dehydrogenase, partial [Dro	0.440	0.376	0.567	2e-21
157132590	425	hypothetical protein AaeL_AAEL002861 [Ae	0.434	0.188	0.55	3e-21
94469068	425	saccharopine dehydrogenase domain-contai	0.434	0.188	0.55	3e-21

>gi|289739645|gb|ADD18570.1| putative saccharopine dehydrogenase [Glossina morsitans morsitans]

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/80 (60%), Positives = 66/80 (82%)

Query: 101 ENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGE 160
           +NL+ IPII+AD+ +ESS+L MA++C V++NCVGPY +YGE VV+ACIE+ THHVD++GE
Sbjct: 56  KNLMSIPIIVADVDDESSLLQMARRCHVLVNCVGPYRFYGEPVVRACIESGTHHVDVSGE 115

Query: 161 PYFMEYMQYEYNTRAQESEV 180
           P +ME MQ +Y+  AQE  V
Sbjct: 116 PQYMETMQLKYDREAQEKNV 135

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195451958|ref|XP_002073150.1| GK13975 [Drosophila willistoni] gi|194169235|gb|EDW84136.1| GK13975 [Drosophila willistoni]

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 64/81 (79%)

Query: 100 RENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITG 159
           + +L   PIIIAD+ NESS+L MAK+CR+++N  GPY +YGE VVKACIEA THHVD++G
Sbjct: 56  KTDLSQTPIIIADVNNESSLLEMAKRCRIVVNTAGPYRFYGEKVVKACIEAGTHHVDVSG 115

Query: 160 EPYFMEYMQYEYNTRAQESEV 180
           EP +ME MQ +YN +A+E  V
Sbjct: 116 EPQYMETMQLKYNYKAKEKGV 136

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195055899|ref|XP_001994850.1| GH13859 [Drosophila grimshawi] gi|193892613|gb|EDV91479.1| GH13859 [Drosophila grimshawi]

 Score =  112 bits (279), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 48/81 (59%), Positives = 64/81 (79%)

Query: 100 RENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITG 159
           +++L   PIIIAD+ +E+S+L MAK CR+++N  GPY +YGE VV+ACIEA THHVD++G
Sbjct: 57  KKDLSQTPIIIADVNDEASLLDMAKSCRIVVNTAGPYRFYGEKVVRACIEAGTHHVDVSG 116

Query: 160 EPYFMEYMQYEYNTRAQESEV 180
           EP FME MQ +YN RA+E  V
Sbjct: 117 EPQFMESMQLKYNERAKERGV 137

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158290701|ref|XP_312273.4| AGAP002652-PA [Anopheles gambiae str. PEST] gi|347968293|ref|XP_003436201.1| AGAP002652-PB [Anopheles gambiae str. PEST] gi|157018022|gb|EAA08164.4| AGAP002652-PA [Anopheles gambiae str. PEST] gi|333468072|gb|EGK96812.1| AGAP002652-PB [Anopheles gambiae str. PEST]

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/80 (60%), Positives = 65/80 (81%)

Query: 101 ENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGE 160
           ++L ++PII ADLK++ S+  MA++C+V++NC GPY +YGE VVKACIEA THHVD++GE
Sbjct: 59  KDLSEVPIITADLKDDDSLKQMAERCKVLINCCGPYRFYGEPVVKACIEAGTHHVDVSGE 118

Query: 161 PYFMEYMQYEYNTRAQESEV 180
           P +ME MQ EY+ RAQE  V
Sbjct: 119 PQYMERMQLEYHQRAQERGV 138

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198450546|ref|XP_001358029.2| GA18705 [Drosophila pseudoobscura pseudoobscura] gi|198131084|gb|EAL27166.2| GA18705 [Drosophila pseudoobscura pseudoobscura]

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/81 (58%), Positives = 64/81 (79%)

Query: 100 RENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITG 159
           + +L   PIIIAD+ NE+S++ MAK+CR+++N  GPY ++GE VVKACIEA THHVD++G
Sbjct: 238 KTDLSQTPIIIADVNNEASLIEMAKRCRIVVNTAGPYRFFGENVVKACIEAGTHHVDVSG 297

Query: 160 EPYFMEYMQYEYNTRAQESEV 180
           EP +ME MQ +YN RA+E  V
Sbjct: 298 EPQYMETMQLKYNDRARERGV 318

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195453709|ref|XP_002073906.1| GK14366 [Drosophila willistoni] gi|194169991|gb|EDW84892.1| GK14366 [Drosophila willistoni]

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/81 (58%), Positives = 65/81 (80%)

Query: 100 RENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITG 159
           +++L  IPII+AD+ +E+S+L MAK+CR+++N  GPY +YGE VV ACIEA THHVD++G
Sbjct: 59  QKDLSQIPIIVADVFDEASLLEMAKRCRIVVNTAGPYRFYGEKVVSACIEAGTHHVDVSG 118

Query: 160 EPYFMEYMQYEYNTRAQESEV 180
           EP +ME MQ +YN RA+E  V
Sbjct: 119 EPQYMETMQLKYNERAKERGV 139

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194742644|ref|XP_001953811.1| GF17952 [Drosophila ananassae] gi|190626848|gb|EDV42372.1| GF17952 [Drosophila ananassae]

 Score =  108 bits (270), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 48/89 (53%), Positives = 66/89 (74%), Gaps = 3/89 (3%)

Query: 92  LGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAK 151
           +GA+    + +L   P++IAD+ NESS+L MAK+CRV++N  GPY ++GE VVKAC+EA 
Sbjct: 51  IGAKS---KTDLSQTPVVIADVNNESSLLEMAKRCRVVVNTAGPYRFFGENVVKACLEAG 107

Query: 152 THHVDITGEPYFMEYMQYEYNTRAQESEV 180
           THHVD++GEP +ME MQ  YN  A+E  V
Sbjct: 108 THHVDVSGEPQYMEQMQLRYNDLAKERGV 136

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|237651917|gb|ACR08647.1| saccharopine dehydrogenase, partial [Drosophila silvestris]

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 63/81 (77%)

Query: 100 RENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITG 159
           +++L   PIIIAD+ +E+S+L MAK CR+++N  GPY +YGE VV+AC+EA TH VD++G
Sbjct: 57  KKDLSQTPIIIADVNDEASLLEMAKSCRIVVNTAGPYRFYGEKVVRACLEAGTHQVDVSG 116

Query: 160 EPYFMEYMQYEYNTRAQESEV 180
           EP FME MQ +YN RA+E  V
Sbjct: 117 EPQFMESMQLKYNERAKERGV 137

Source: Drosophila silvestris

Species: Drosophila silvestris

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157132590|ref|XP_001656085.1| hypothetical protein AaeL_AAEL002861 [Aedes aegypti] gi|157132592|ref|XP_001656086.1| hypothetical protein AaeL_AAEL002861 [Aedes aegypti] gi|108881659|gb|EAT45884.1| AAEL002861-PB [Aedes aegypti] gi|108881660|gb|EAT45885.1| AAEL002861-PA [Aedes aegypti]

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 64/80 (80%)

Query: 101 ENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGE 160
           ++L + P++IAD+K+  S+  MA++CR+++NC GPY ++GE VVKACIEA THHVD++GE
Sbjct: 58  KDLSETPMVIADVKDPDSLKKMAEQCRIVVNCCGPYRFFGEPVVKACIEAGTHHVDVSGE 117

Query: 161 PYFMEYMQYEYNTRAQESEV 180
           P +ME MQ +YN +AQE  V
Sbjct: 118 PQYMEKMQLQYNEQAQEKGV 137

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|94469068|gb|ABF18383.1| saccharopine dehydrogenase domain-containing protein [Aedes aegypti]

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 64/80 (80%)

Query: 101 ENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGE 160
           ++L + P++IAD+K+  S+  MA++CR+++NC GPY ++GE VVKACIEA THHVD++GE
Sbjct: 58  KDLSETPMVIADVKDPDSLKKMAEQCRIVVNCCGPYRFFGEPVVKACIEAGTHHVDVSGE 117

Query: 161 PYFMEYMQYEYNTRAQESEV 180
           P +ME MQ +YN +AQE  V
Sbjct: 118 PQYMEKMQLQYNEQAQEKGV 137

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
FB|FBgn0038038	431	CG5167 [Drosophila melanogaste	0.467	0.199	0.516	1.1e-20
FB|FBgn0037298	430	CG2604 [Drosophila melanogaste	0.440	0.188	0.518	6.6e-20
ZFIN|ZDB-GENE-041010-211	429	sccpdhb "saccharopine dehydrog	0.472	0.202	0.471	1.4e-17
UNIPROTKB|F1MX05	429	SCCPDH "Saccharopine dehydroge	0.679	0.291	0.416	1.4e-16
UNIPROTKB|Q3T067	429	SCCPDH "Saccharopine dehydroge	0.679	0.291	0.416	1.4e-16
UNIPROTKB|F1Q2B1	385	SCCPDH "Uncharacterized protei	0.413	0.197	0.513	3.4e-16
RGD|1311440	429	Sccpdh "saccharopine dehydroge	0.413	0.177	0.526	3.8e-16
UNIPROTKB|Q6AY30	429	Sccpdh "Saccharopine dehydroge	0.413	0.177	0.526	3.8e-16
UNIPROTKB|Q8NBX0	429	SCCPDH "Saccharopine dehydroge	0.679	0.291	0.409	6.3e-16
UNIPROTKB|Q5ZMK3	434	SCCPDH "Uncharacterized protei	0.690	0.292	0.369	6.5e-16

FB|FBgn0038038 CG5167 [Drosophila melanogaster (taxid:7227)]

 Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
 Identities = 46/89 (51%), Positives = 66/89 (74%)

Query:    92 LGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAK 151
             +GA+    + +L   PI+IAD+ NE+S+L MAK+CR+++N  GPY ++GE VV+ACIEA 
Sbjct:    51 MGAKS---KTDLSQTPIVIADVNNEASLLEMAKRCRILVNTAGPYRFFGERVVRACIEAG 107

Query:   152 THHVDITGEPYFMEYMQYEYNTRAQESEV 180
             THHVD++GEP +ME MQ  Y+  A+E  V
Sbjct:   108 THHVDVSGEPQYMETMQLRYHDLAKERGV 136

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005811 "lipid particle" evidence=IDA

FB|FBgn0037298 CG2604 [Drosophila melanogaster (taxid:7227)]

 Score = 241 (89.9 bits), Expect = 6.6e-20, P = 6.6e-20
 Identities = 42/81 (51%), Positives = 62/81 (76%)

Query:   100 RENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITG 159
             +++L  +PI IAD+ +++S+L MAKKCR+++N  GPY ++GE VVK CIE+ THHVD++G
Sbjct:    56 KKDLSQVPIFIADVNDQASLLEMAKKCRIVVNTAGPYRFHGENVVKCCIESGTHHVDVSG 115

Query:   160 EPYFMEYMQYEYNTRAQESEV 180
             EP +ME MQ  Y+  A+E  V
Sbjct:   116 EPQYMETMQLRYDQLAREKGV 136

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005811 "lipid particle" evidence=IDA

GO:0035220 "wing disc development" evidence=IGI

GO:0022416 "chaeta development" evidence=IGI

ZFIN|ZDB-GENE-041010-211 sccpdhb "saccharopine dehydrogenase b" [Danio rerio (taxid:7955)]

 Score = 220 (82.5 bits), Expect = 1.4e-17, P = 1.4e-17
 Identities = 41/87 (47%), Positives = 59/87 (67%)

Query:    94 ARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTH 153
             A D L +  L  + +I+AD+    S+ IM K+  ++LNCVGPY +YGE VVKACIE   H
Sbjct:    62 AADALSKPELKSVEVIVADVAEAESLAIMCKQAVIVLNCVGPYRFYGEPVVKACIENGAH 121

Query:   154 HVDITGEPYFMEYMQYEYNTRAQESEV 180
              +DI GEP F+E +Q  Y+++A+E+ V
Sbjct:   122 CIDICGEPQFLEGIQLMYHSKAEENGV 148

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1MX05 SCCPDH "Saccharopine dehydrogenase-like oxidoreductase" [Bos taurus (taxid:9913)]

 Score = 211 (79.3 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 55/132 (41%), Positives = 79/132 (59%)

Query:    53 FRGQTLS---VQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLI-DIPI 108
             F GQ ++    ++++ P R S+  P A  A      L R+ L  A   L R  L  ++ I
Sbjct:    18 FTGQFVTEEVAREQVSPERTSH-LPWAV-AGRSREKLLRV-LERAAMKLGRPTLSSEVGI 74

Query:   109 IIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQ 168
             II D+ N +S+  MAK+  V+LNCVGPY +YGE V+KACIE  T  +DI+GEP F+E M 
Sbjct:    75 IICDITNPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGTSCIDISGEPQFLELMY 134

Query:   169 YEYNTRAQESEV 180
             ++Y+ +A E  V
Sbjct:   135 WKYHEKAAEKGV 146

GO:0030496 "midbody" evidence=IEA

GO:0005811 "lipid particle" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q3T067 SCCPDH "Saccharopine dehydrogenase-like oxidoreductase" [Bos taurus (taxid:9913)]

 Score = 211 (79.3 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 55/132 (41%), Positives = 79/132 (59%)

Query:    53 FRGQTLS---VQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLI-DIPI 108
             F GQ ++    ++++ P R S+  P A  A      L R+ L  A   L R  L  ++ I
Sbjct:    18 FTGQFVTEEVAREQVSPERTSH-LPWAV-AGRSREKLLRV-LERAAMKLGRPTLSSEVGI 74

Query:   109 IIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQ 168
             II D+ N +S+  MAK+  V+LNCVGPY +YGE V+KACIE  T  +DI+GEP F+E M 
Sbjct:    75 IICDITNPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGTSCIDISGEPQFLELMY 134

Query:   169 YEYNTRAQESEV 180
             ++Y+ +A E  V
Sbjct:   135 WKYHEKAAEKGV 146

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1Q2B1 SCCPDH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 206 (77.6 bits), Expect = 3.4e-16, P = 3.4e-16
 Identities = 39/76 (51%), Positives = 54/76 (71%)

Query:   105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFM 164
             ++ III D+ N +S+  MAK+  V+LNCVGPY +YGE V+KACIE  T  +DI GEP F+
Sbjct:    27 EVGIIICDITNPASLDEMAKQAAVVLNCVGPYRFYGEPVIKACIENGTSCIDICGEPQFL 86

Query:   165 EYMQYEYNTRAQESEV 180
             E M ++Y+ +A E  V
Sbjct:    87 ELMYWKYHEKAAEKGV 102

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|1311440 Sccpdh "saccharopine dehydrogenase (putative)" [Rattus norvegicus (taxid:10116)]

 Score = 207 (77.9 bits), Expect = 3.8e-16, P = 3.8e-16
 Identities = 40/76 (52%), Positives = 53/76 (69%)

Query:   105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFM 164
             ++ III D+ N +S+  MAKK  ++LNCVGPY +YGE VVKACIE  T  +DI GEP F+
Sbjct:    71 EVGIIICDISNPASLDEMAKKATLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEPQFL 130

Query:   165 EYMQYEYNTRAQESEV 180
             E M  +Y+ +A E  V
Sbjct:   131 ELMHVKYHEKAAEKGV 146

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005811 "lipid particle" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030496 "midbody" evidence=ISO

UNIPROTKB|Q6AY30 Sccpdh "Saccharopine dehydrogenase-like oxidoreductase" [Rattus norvegicus (taxid:10116)]

 Score = 207 (77.9 bits), Expect = 3.8e-16, P = 3.8e-16
 Identities = 40/76 (52%), Positives = 53/76 (69%)

Query:   105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFM 164
             ++ III D+ N +S+  MAKK  ++LNCVGPY +YGE VVKACIE  T  +DI GEP F+
Sbjct:    71 EVGIIICDISNPASLDEMAKKATLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEPQFL 130

Query:   165 EYMQYEYNTRAQESEV 180
             E M  +Y+ +A E  V
Sbjct:   131 ELMHVKYHEKAAEKGV 146

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8NBX0 SCCPDH "Saccharopine dehydrogenase-like oxidoreductase" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 6.3e-16, P = 6.3e-16
 Identities = 54/132 (40%), Positives = 77/132 (58%)

Query:    53 FRGQTLS---VQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLI-DIPI 108
             F GQ ++    ++++ P R S   P A  A      L R+ L  A   L R  L  ++ I
Sbjct:    18 FTGQFVTEEVAREQVDPERSSR-LPWAV-AGRSREKLQRV-LEKAALKLGRPTLSSEVGI 74

Query:   109 IIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQ 168
             II D+ N +S+  MAK+  V+LNCVGPY +YGE V+KACIE     +DI+GEP F+E MQ
Sbjct:    75 IICDIANPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGASCIDISGEPQFLELMQ 134

Query:   169 YEYNTRAQESEV 180
              +Y+ +A +  V
Sbjct:   135 LKYHEKAADKGV 146

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0030496 "midbody" evidence=IDA

GO:0005811 "lipid particle" evidence=IDA

UNIPROTKB|Q5ZMK3 SCCPDH "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 205 (77.2 bits), Expect = 6.5e-16, P = 6.5e-16
 Identities = 48/130 (36%), Positives = 76/130 (58%)

Query:    53 FRGQTLSVQDKIRPGRGSNPR-PSAYKADAPTSNLTRLGLLGARDCLYRENL-IDIPIII 110
             F GQ + V++  R   G   R P  +     + N  +  L  A + L +  L  ++ +++
Sbjct:    23 FTGQFV-VEEVARTASGGELRGPLRWAVAGRSRNKLQEVLERAAERLGKTALGPEVGVLL 81

Query:   111 ADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYE 170
              D+ + +S+  MAK+ RV+LNCVGPY ++GE VVKAC+E     +DI+GEP F+E M  +
Sbjct:    82 CDVGDPASLAAMAKQTRVVLNCVGPYRFFGEPVVKACVENGASCIDISGEPQFLEGMYLK 141

Query:   171 YNTRAQESEV 180
             YN +A E +V
Sbjct:   142 YNEKAAEKKV 151

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005811 "lipid particle" evidence=IEA

GO:0030496 "midbody" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3T067	SCPDL_BOVIN	1, ., -, ., -, ., -	0.5131	0.4130	0.1771	yes	N/A
Q6AY30	SCPDL_RAT	1, ., -, ., -, ., -	0.5263	0.4130	0.1771	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	184
COG3268	382	COG3268, COG3268, Uncharacterized conserved protei	2e-16
pfam03435	380	pfam03435, Saccharop_dh, Saccharopine dehydrogenas	6e-07
COG1748	389	COG1748, LYS9, Saccharopine dehydrogenase and rela	8e-04

>gnl|CDD|225807 COG3268, COG3268, Uncharacterized conserved protein [Function unknown]

 Score = 75.6 bits (186), Expect = 2e-16
 Identities = 29/72 (40%), Positives = 42/72 (58%)

Query: 112 DLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEY 171
            L   +++  MA + +V+LNCVGPYT YGE +V AC  A T + DITGE  F E     Y
Sbjct: 58  PLGVPAALEAMASRTQVVLNCVGPYTRYGEPLVAACAAAGTDYADITGEIMFFENSIDLY 117

Query: 172 NTRAQESEVQKC 183
           + +A ++  +  
Sbjct: 118 HAQAADAGARII 129

Length = 382

>gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase

 Score = 48.1 bits (115), Expect = 6e-07
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 6/73 (8%)

Query: 108 IIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYM 167
            I  D  N  +++ + K+  +++N   P+      V+KACIE   H+VD +    ++   
Sbjct: 49  AIAVDADNYEALVALLKEGDLVINLAPPF--LSLTVLKACIETGVHYVDTS----YLREA 102

Query: 168 QYEYNTRAQESEV 180
           Q   + +A+++ V
Sbjct: 103 QLALHEKAKDAGV 115

This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380

>gnl|CDD|224662 COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 12/69 (17%), Positives = 34/69 (49%), Gaps = 6/69 (8%)

Query: 112 DLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEY 171
           D  +  +++ + K   +++N   P+      ++KACI+    +VD +    + E   ++ 
Sbjct: 55  DAADVDALVALIKDFDLVINAAPPF--VDLTILKACIKTGVDYVDTS----YYEEPPWKL 108

Query: 172 NTRAQESEV 180
           +  A+++ +
Sbjct: 109 DEEAKKAGI 117

Length = 389

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	184
KOG2733|consensus	423		99.95
COG3268	382	Uncharacterized conserved protein [Function unknow	99.88
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	99.72
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.45
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	98.86
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.96
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	97.77
CHL00194	317	ycf39 Ycf39; Provisional	97.69
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.55
PLN03209	576	translocon at the inner envelope of chloroplast su	97.06
KOG2865|consensus	391		96.92
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	96.9
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.84
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	96.82
PLN02214	342	cinnamoyl-CoA reductase	96.8
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.74
KOG0172|consensus	445		96.51
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	96.5
PRK06179	270	short chain dehydrogenase; Provisional	96.39
PLN02427	386	UDP-apiose/xylose synthase	96.36
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	96.28
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.26
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.04
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	96.01
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	96.01
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	96.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	95.99
PLN00198	338	anthocyanidin reductase; Provisional	95.95
PRK09009	235	C factor cell-cell signaling protein; Provisional	95.92
PRK07856	252	short chain dehydrogenase; Provisional	95.86
PLN02695	370	GDP-D-mannose-3',5'-epimerase	95.84
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	95.8
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	95.77
PLN02653	340	GDP-mannose 4,6-dehydratase	95.67
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	95.62
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.61
PRK06182	273	short chain dehydrogenase; Validated	95.49
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	95.48
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.46
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.42
PLN02260	668	probable rhamnose biosynthetic enzyme	95.35
PRK05865	854	hypothetical protein; Provisional	95.34
PRK09186	256	flagellin modification protein A; Provisional	95.33
PRK06398	258	aldose dehydrogenase; Validated	95.26
PLN02650	351	dihydroflavonol-4-reductase	95.25
PLN02240	352	UDP-glucose 4-epimerase	95.24
PLN02253	280	xanthoxin dehydrogenase	95.12
PRK07326	237	short chain dehydrogenase; Provisional	95.12
PLN00016	378	RNA-binding protein; Provisional	95.09
PRK05876	275	short chain dehydrogenase; Provisional	95.08
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	94.98
PRK06138	252	short chain dehydrogenase; Provisional	94.91
PRK06523	260	short chain dehydrogenase; Provisional	94.88
PRK13304	265	L-aspartate dehydrogenase; Reviewed	94.87
PRK05867	253	short chain dehydrogenase; Provisional	94.8
PRK07024	257	short chain dehydrogenase; Provisional	94.8
PRK08264	238	short chain dehydrogenase; Validated	94.72
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.72
PRK05866	293	short chain dehydrogenase; Provisional	94.66
PRK05854	313	short chain dehydrogenase; Provisional	94.65
PRK06196	315	oxidoreductase; Provisional	94.63
PRK07478	254	short chain dehydrogenase; Provisional	94.57
KOG1502|consensus	327		94.55
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	94.54
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	94.51
PRK08265	261	short chain dehydrogenase; Provisional	94.48
PRK07453	322	protochlorophyllide oxidoreductase; Validated	94.47
PRK08309	177	short chain dehydrogenase; Provisional	94.47
PRK05884	223	short chain dehydrogenase; Provisional	94.45
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	94.42
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	94.35
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	94.35
PRK08267	260	short chain dehydrogenase; Provisional	94.3
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	94.21
PRK12320	699	hypothetical protein; Provisional	94.17
PRK12367	245	short chain dehydrogenase; Provisional	94.16
PRK06172	253	short chain dehydrogenase; Provisional	94.1
PF03447	117	NAD_binding_3: Homoserine dehydrogenase, NAD bindi	94.08
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	94.08
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	94.08
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.05
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.05
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.04
PRK08643	256	acetoin reductase; Validated	94.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.99
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	93.97
PRK07890	258	short chain dehydrogenase; Provisional	93.95
PRK07063	260	short chain dehydrogenase; Provisional	93.95
PRK07201	657	short chain dehydrogenase; Provisional	93.95
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	93.91
PRK06949	258	short chain dehydrogenase; Provisional	93.87
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	93.87
PRK06197	306	short chain dehydrogenase; Provisional	93.75
PRK06057	255	short chain dehydrogenase; Provisional	93.7
PRK06482	276	short chain dehydrogenase; Provisional	93.7
PRK06124	256	gluconate 5-dehydrogenase; Provisional	93.69
PRK05717	255	oxidoreductase; Validated	93.68
PRK08177	225	short chain dehydrogenase; Provisional	93.68
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	93.67
PRK08862	227	short chain dehydrogenase; Provisional	93.65
PRK06180	277	short chain dehydrogenase; Provisional	93.65
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	93.65
PRK07067	257	sorbitol dehydrogenase; Provisional	93.63
PRK07454	241	short chain dehydrogenase; Provisional	93.6
PRK09291	257	short chain dehydrogenase; Provisional	93.57
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	93.57
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	93.56
PRK09135	249	pteridine reductase; Provisional	93.53
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	93.49
PRK08251	248	short chain dehydrogenase; Provisional	93.49
PRK10675	338	UDP-galactose-4-epimerase; Provisional	93.48
PLN02896	353	cinnamyl-alcohol dehydrogenase	93.48
COG2910	211	Putative NADH-flavin reductase [General function p	93.47
PRK07825	273	short chain dehydrogenase; Provisional	93.47
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	93.46
PRK08339	263	short chain dehydrogenase; Provisional	93.46
PRK07062	265	short chain dehydrogenase; Provisional	93.45
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	93.44
PRK05993	277	short chain dehydrogenase; Provisional	93.43
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	93.4
PRK12828	239	short chain dehydrogenase; Provisional	93.35
PRK08628	258	short chain dehydrogenase; Provisional	93.31
PRK06194	287	hypothetical protein; Provisional	93.28
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	93.27
PRK07523	255	gluconate 5-dehydrogenase; Provisional	93.25
PRK05693	274	short chain dehydrogenase; Provisional	93.25
PRK07577	234	short chain dehydrogenase; Provisional	93.22
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	93.21
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	93.16
TIGR01746	367	Thioester-redct thioester reductase domain. It has	93.16
PRK10538	248	malonic semialdehyde reductase; Provisional	93.12
PRK06125	259	short chain dehydrogenase; Provisional	93.1
PRK07814	263	short chain dehydrogenase; Provisional	93.08
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	93.07
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.05
COG0300	265	DltE Short-chain dehydrogenases of various substra	93.03
PRK08936	261	glucose-1-dehydrogenase; Provisional	93.02
PRK06114	254	short chain dehydrogenase; Provisional	93.0
PLN02686	367	cinnamoyl-CoA reductase	92.98
PRK05650	270	short chain dehydrogenase; Provisional	92.96
PRK08226	263	short chain dehydrogenase; Provisional	92.95
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	92.92
PRK06841	255	short chain dehydrogenase; Provisional	92.9
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	92.9
PRK05875	276	short chain dehydrogenase; Provisional	92.9
PLN02583	297	cinnamoyl-CoA reductase	92.87
PRK08263	275	short chain dehydrogenase; Provisional	92.85
TIGR00036	266	dapB dihydrodipicolinate reductase.	92.82
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	92.82
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	92.81
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	92.79
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	92.78
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	92.78
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	92.72
PRK05872	296	short chain dehydrogenase; Provisional	92.72
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	92.69
PRK06181	263	short chain dehydrogenase; Provisional	92.67
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	92.67
PRK08589	272	short chain dehydrogenase; Validated	92.62
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	92.6
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	92.58
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	92.56
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	92.53
PRK06139	330	short chain dehydrogenase; Provisional	92.49
PRK06947	248	glucose-1-dehydrogenase; Provisional	92.48
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.42
PRK08277	278	D-mannonate oxidoreductase; Provisional	92.41
PRK08278	273	short chain dehydrogenase; Provisional	92.4
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	92.4
PRK06101	240	short chain dehydrogenase; Provisional	92.38
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	92.38
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.36
PLN02778	298	3,5-epimerase/4-reductase	92.35
PRK07806	248	short chain dehydrogenase; Provisional	92.34
PRK05855	582	short chain dehydrogenase; Validated	92.33
PRK06198	260	short chain dehydrogenase; Provisional	92.31
PRK07109	334	short chain dehydrogenase; Provisional	92.27
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	92.26
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	92.22
PRK09134	258	short chain dehydrogenase; Provisional	92.21
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	92.15
PRK07576	264	short chain dehydrogenase; Provisional	92.11
PRK08017	256	oxidoreductase; Provisional	92.08
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	92.05
PRK06914	280	short chain dehydrogenase; Provisional	92.04
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	92.04
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	92.01
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	91.99
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	91.93
PRK06483	236	dihydromonapterin reductase; Provisional	91.9
PRK07677	252	short chain dehydrogenase; Provisional	91.83
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	91.82
PRK07102	243	short chain dehydrogenase; Provisional	91.8
PRK07201	657	short chain dehydrogenase; Provisional	91.79
PRK07074	257	short chain dehydrogenase; Provisional	91.77
PRK07097	265	gluconate 5-dehydrogenase; Provisional	91.74
PRK08340	259	glucose-1-dehydrogenase; Provisional	91.7
PRK12829	264	short chain dehydrogenase; Provisional	91.66
PRK12935	247	acetoacetyl-CoA reductase; Provisional	91.65
PRK12939	250	short chain dehydrogenase; Provisional	91.51
PRK06500	249	short chain dehydrogenase; Provisional	91.46
PRK07041	230	short chain dehydrogenase; Provisional	91.44
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	91.41
PRK06701	290	short chain dehydrogenase; Provisional	91.4
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	91.33
PRK08219	227	short chain dehydrogenase; Provisional	91.31
PRK07023	243	short chain dehydrogenase; Provisional	91.3
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	91.29
PRK12746	254	short chain dehydrogenase; Provisional	91.28
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	91.27
PLN02572	442	UDP-sulfoquinovose synthase	91.27
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	91.26
PRK07831	262	short chain dehydrogenase; Provisional	91.26
PRK12937	245	short chain dehydrogenase; Provisional	91.26
TIGR02415	254	23BDH acetoin reductases. One member of this famil	91.25
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.16
PRK09072	263	short chain dehydrogenase; Provisional	91.14
PRK06123	248	short chain dehydrogenase; Provisional	91.11
PRK13303	265	L-aspartate dehydrogenase; Provisional	91.04
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	91.02
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	91.01
PRK06484	520	short chain dehydrogenase; Validated	91.01
PRK07774	250	short chain dehydrogenase; Provisional	90.97
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	90.96
TIGR03855	229	NAD_NadX aspartate dehydrogenase. Members of this	90.9
PRK07069	251	short chain dehydrogenase; Validated	90.88
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.66
PRK07832	272	short chain dehydrogenase; Provisional	90.52
PRK12548	289	shikimate 5-dehydrogenase; Provisional	90.49
PRK12744	257	short chain dehydrogenase; Provisional	90.47
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.44
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	90.44
PRK09242	257	tropinone reductase; Provisional	90.39
PRK07578	199	short chain dehydrogenase; Provisional	90.37
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	90.35
PRK06484	520	short chain dehydrogenase; Validated	90.27
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	90.22
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	90.18
PRK05599	246	hypothetical protein; Provisional	90.12
PRK07775	274	short chain dehydrogenase; Provisional	90.11
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.08
PRK08085	254	gluconate 5-dehydrogenase; Provisional	90.07
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.05
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	90.05
PRK08213	259	gluconate 5-dehydrogenase; Provisional	90.03
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	89.97
PLN02996	491	fatty acyl-CoA reductase	89.96
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	89.96
PLN02206	442	UDP-glucuronate decarboxylase	89.94
PRK07060	245	short chain dehydrogenase; Provisional	89.74
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	89.5
PRK12742	237	oxidoreductase; Provisional	89.49
PRK07904	253	short chain dehydrogenase; Provisional	89.44
PRK07791	286	short chain dehydrogenase; Provisional	89.37
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	89.35
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	89.22
KOG1430|consensus	361		89.02
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	88.84
PLN02166	436	dTDP-glucose 4,6-dehydratase	88.7
PRK06940	275	short chain dehydrogenase; Provisional	88.61
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	88.59
PRK12827	249	short chain dehydrogenase; Provisional	88.56
PRK12743	256	oxidoreductase; Provisional	88.53
PRK06349	426	homoserine dehydrogenase; Provisional	88.06
PRK12938	246	acetyacetyl-CoA reductase; Provisional	87.99
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	87.89
PLN00015	308	protochlorophyllide reductase	87.89
PRK13301	267	putative L-aspartate dehydrogenase; Provisional	87.84
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	87.67
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	87.62
PRK06924	251	short chain dehydrogenase; Provisional	87.55
PRK08703	239	short chain dehydrogenase; Provisional	87.51
PRK12824	245	acetoacetyl-CoA reductase; Provisional	87.44
TIGR01921	324	DAP-DH diaminopimelate dehydrogenase. This model r	87.42
PRK06953	222	short chain dehydrogenase; Provisional	87.38
PLN02383	344	aspartate semialdehyde dehydrogenase	87.32
PRK07035	252	short chain dehydrogenase; Provisional	87.23
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	86.99
TIGR03450	351	mycothiol_INO1 inositol 1-phosphate synthase, Acti	86.64
PRK06128	300	oxidoreductase; Provisional	86.56
KOG1200|consensus	256		86.56
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	86.53
PRK06720	169	hypothetical protein; Provisional	86.52
PRK08303	305	short chain dehydrogenase; Provisional	86.36
COG0673	342	MviM Predicted dehydrogenases and related proteins	86.26
PRK08324	681	short chain dehydrogenase; Validated	86.03
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	85.96
PLN02503	605	fatty acyl-CoA reductase 2	85.94
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	85.86
PRK11579	346	putative oxidoreductase; Provisional	85.48
PF07994	295	NAD_binding_5: Myo-inositol-1-phosphate synthase;	85.44
KOG0725|consensus	270		85.43
KOG1208|consensus	314		85.4
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	85.28
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	85.2
PRK07985	294	oxidoreductase; Provisional	85.17
PRK06270	341	homoserine dehydrogenase; Provisional	85.16
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	84.45
KOG1611|consensus	249		84.32
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	83.94
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	83.71
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	83.54
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	83.25
PRK12747	252	short chain dehydrogenase; Provisional	83.06
PRK10206	344	putative oxidoreductase; Provisional	82.87
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.72
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	82.42
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	81.07
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	80.68
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	80.38
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	80.06
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	80.05

>KOG2733|consensus

Probab=99.95  E-value=6.6e-28  Score=218.13  Aligned_cols=124  Identities=42%  Similarity=0.599  Sum_probs=112.2

Q ss_pred             ccccc-cccCccccceeeecccccCCCCCCCchhhhhhh--CCCCCceeEEeeeeccccc-----------ccCCCCCCE
Q psy1304          43 KEDRI-GESQPFRGQTLSVQDKIRPGRGSNPRPSAYKAD--APTSNLTRLGLLGARDCLY-----------RENLIDIPI  108 (184)
Q Consensus        43 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~--~~~~~~~~iaLAGrr~~lg-----------~~~~~~v~~  108 (184)
                      +||+| .+-++|+||-                +++++.+  ..++  ++||+|||++.+-           ...+.+..+
T Consensus         5 ~yDvVIyGASGfTG~y----------------ivee~v~~~~~~~--~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i   66 (423)
T KOG2733|consen    5 RYDVVIYGASGFTGKY----------------IVEEAVSSQVFEG--LSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVI   66 (423)
T ss_pred             eeeEEEEcccccccee----------------eHHHHhhhhcccC--ceEEEecCCHHHHHHHHHHHhhccCCCcccceE
Confidence            68887 8999999999                8888886  7777  9999999987422           223355559


Q ss_pred             EEEeCCCHHHHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeeeC
Q psy1304         109 IIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKCT  184 (184)
Q Consensus       109 v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Ivt  184 (184)
                      +.+|.+|+++|.+|++++.+||||+|||..+|++|++||+++|+||+|++||+.|++.++.+||++|+++||+||+
T Consensus        67 ~i~D~~n~~Sl~emak~~~vivN~vGPyR~hGE~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVs  142 (423)
T KOG2733|consen   67 LIADSANEASLDEMAKQARVIVNCVGPYRFHGEPVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKEKGVYIVS  142 (423)
T ss_pred             EEecCCCHHHHHHHHhhhEEEEeccccceecCcHHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHhcCeEEEe
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999985

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=99.88  E-value=3.5e-23  Score=186.18  Aligned_cols=125  Identities=30%  Similarity=0.426  Sum_probs=106.4

Q ss_pred             hhhccccc-cccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--CCCCCCEEEEeCCCH
Q psy1304          40 KQRKEDRI-GESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--NLIDIPIIIADLKNE  116 (184)
Q Consensus        40 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--~~~~v~~v~vDv~D~  116 (184)
                      +.|.+|.| -+-++|.|+.                +++||++.+-.    -+||||+..+-..  +.-..++...++.++
T Consensus         3 ~e~e~d~iiYGAtGy~G~l----------------vae~l~~~g~~----~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p   62 (382)
T COG3268           3 MEREYDIIIYGATGYAGGL----------------VAEYLAREGLT----AALAGRSSAKLDALRASLGPEAAVFPLGVP   62 (382)
T ss_pred             CCcceeEEEEccccchhHH----------------HHHHHHHcCCc----hhhccCCHHHHHHHHHhcCccccccCCCCH
Confidence            35778877 8999999999                99999998844    4999998743210  001244555556679


Q ss_pred             HHHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeeeC
Q psy1304         117 SSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKCT  184 (184)
Q Consensus       117 ~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Ivt  184 (184)
                      +.+++++.+++||+||||||..+|+++++||+.+||||+|||||..|++++|..||++|+++|+.||.
T Consensus        63 ~~~~~~~~~~~VVlncvGPyt~~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~  130 (382)
T COG3268          63 AALEAMASRTQVVLNCVGPYTRYGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIP  130 (382)
T ss_pred             HHHHHHHhcceEEEeccccccccccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999973

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=99.72  E-value=1.6e-17  Score=146.97  Aligned_cols=113  Identities=22%  Similarity=0.331  Sum_probs=88.7

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-----CCCCCCEEEEeCCCHHHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-----NLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-----~~~~v~~v~vDv~D~~sL~a  121 (184)
                      |.+. ++.|+.                ++.+|++.++.  .+|.+++|+.+....     ...+++++++|++|+++|.+
T Consensus         3 vlG~-G~vG~~----------------~~~~L~~~~~~--~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~   63 (386)
T PF03435_consen    3 VLGA-GRVGSA----------------IARLLARRGPF--EEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAE   63 (386)
T ss_dssp             EE---SHHHHH----------------HHHHHHCTTCE---EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHH
T ss_pred             EEcC-cHHHHH----------------HHHHHhcCCCC--CcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHH
Confidence            3455 777777                88999988877  599999998764321     22678999999999999999


Q ss_pred             HhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeeeC
Q psy1304         122 MAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKCT  184 (184)
Q Consensus       122 ~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Ivt  184 (184)
                      +++++|+||||+|||  ++.+++++|+++|+||||.+.   +... +++||++|+++|+++++
T Consensus        64 ~~~~~dvVin~~gp~--~~~~v~~~~i~~g~~yvD~~~---~~~~-~~~l~~~a~~~g~~~l~  120 (386)
T PF03435_consen   64 LLRGCDVVINCAGPF--FGEPVARACIEAGVHYVDTSY---VTEE-MLALDEEAKEAGVTALP  120 (386)
T ss_dssp             HHTTSSEEEE-SSGG--GHHHHHHHHHHHT-EEEESS----HHHH-HHHCHHHHHHTTSEEE-
T ss_pred             HHhcCCEEEECCccc--hhHHHHHHHHHhCCCeeccch---hHHH-HHHHHHHHHhhCCEEEe
Confidence            999999999999999  778999999999999999655   3444 48999999999999874

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.45  E-value=1.8e-13  Score=125.09  Aligned_cols=102  Identities=12%  Similarity=0.157  Sum_probs=84.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccchHHHHHHHH
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIE  149 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACie  149 (184)
                      ++..||+...   -+|.+|+|+.++-..    ..++++.+++|++|.++|.+++++.|+||||++||+..  .+++||++
T Consensus        16 va~~la~~~d---~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~~--~i~ka~i~   90 (389)
T COG1748          16 VAHKLAQNGD---GEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVDL--TILKACIK   90 (389)
T ss_pred             HHHHHHhCCC---ceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhhH--HHHHHHHH
Confidence            5555565543   589999997543221    12479999999999999999999999999999888765  99999999


Q ss_pred             cCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeeeC
Q psy1304         150 AKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKCT  184 (184)
Q Consensus       150 AGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Ivt  184 (184)
                      +|+||+|++...+.   . ++|+++|+++|+++|+
T Consensus        91 ~gv~yvDts~~~~~---~-~~~~~~a~~Agit~v~  121 (389)
T COG1748          91 TGVDYVDTSYYEEP---P-WKLDEEAKKAGITAVL  121 (389)
T ss_pred             hCCCEEEcccCCch---h-hhhhHHHHHcCeEEEc
Confidence            99999999988776   3 5899999999999874

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=98.86  E-value=5e-09  Score=105.75  Aligned_cols=123  Identities=20%  Similarity=0.192  Sum_probs=88.8

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCC----------CceeEEeeeeccccccc---CCCCCCEEEEeCCCHH
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTS----------NLTRLGLLGARDCLYRE---NLIDIPIIIADLKNES  117 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~----------~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D~~  117 (184)
                      ...+.|.+.|-|-=+-|+    ..+.+|++.+.-          ..+.++++.++.+....   ..++++.+++|+.|.+
T Consensus       565 ~~~~~~rIlVLGAG~VG~----~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e  640 (1042)
T PLN02819        565 VTKKSQNVLILGAGRVCR----PAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSE  640 (1042)
T ss_pred             ccccCCcEEEECCCHHHH----HHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHH
Confidence            345677777766333333    377888865321          01347777754432221   1246778999999999


Q ss_pred             HHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +|.++++++|+||+|++++  +...++++|+++|+||+|.+-.   ..++ .++++.|+++|++++
T Consensus       641 ~L~~~v~~~DaVIsalP~~--~H~~VAkaAieaGkHvv~eky~---~~e~-~~L~e~Ak~AGV~~m  700 (1042)
T PLN02819        641 SLLKYVSQVDVVISLLPAS--CHAVVAKACIELKKHLVTASYV---SEEM-SALDSKAKEAGITIL  700 (1042)
T ss_pred             HHHHhhcCCCEEEECCCch--hhHHHHHHHHHcCCCEEECcCC---HHHH-HHHHHHHHHcCCEEE
Confidence            9999999999999999543  3589999999999999999833   3344 689999999999986

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.96  E-value=1.6e-05  Score=62.25  Aligned_cols=91  Identities=15%  Similarity=0.157  Sum_probs=71.5

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|+-                ++.+|.+..    .++.+..|+...-.. ..++++++.|+.|++++.++++++
T Consensus         3 V~GatG~vG~~----------------l~~~L~~~~----~~V~~~~R~~~~~~~-~~~~~~~~~d~~d~~~~~~al~~~   61 (183)
T PF13460_consen    3 VFGATGFVGRA----------------LAKQLLRRG----HEVTALVRSPSKAED-SPGVEIIQGDLFDPDSVKAALKGA   61 (183)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----SEEEEEESSGGGHHH-CTTEEEEESCTTCHHHHHHHHTTS
T ss_pred             EECCCChHHHH----------------HHHHHHHCC----CEEEEEecCchhccc-ccccccceeeehhhhhhhhhhhhc
Confidence            56778888887                778888776    456666677664433 578999999999999999999999


Q ss_pred             cEEEecccccccc---chHHHHHHHHcCCC-EeeCC
Q psy1304         127 RVILNCVGPYTWY---GEAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       127 dVVIN~aGPf~~~---g~~VaeACieAGth-YVDlt  158 (184)
                      |+||+|+||-...   -..++++|.++|+. ++-++
T Consensus        62 d~vi~~~~~~~~~~~~~~~~~~a~~~~~~~~~v~~s   97 (183)
T PF13460_consen   62 DAVIHAAGPPPKDVDAAKNIIEAAKKAGVKRVVYLS   97 (183)
T ss_dssp             SEEEECCHSTTTHHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred             chhhhhhhhhcccccccccccccccccccccceeee
Confidence            9999999975542   26888999999995 66544

...

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=97.77  E-value=8.9e-05  Score=64.21  Aligned_cols=90  Identities=13%  Similarity=0.091  Sum_probs=64.0

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc----cCCCCCCEEEEeCCCHHHHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR----ENLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~----~~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      |-+.++|=|+-                ++..|.+..+.  ..|-+..++.....    ...+...++++|+.|++++.++
T Consensus         2 VTGgsGflG~~----------------iv~~Ll~~g~~--~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a   63 (280)
T PF01073_consen    2 VTGGSGFLGSH----------------IVRQLLERGYI--YEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEA   63 (280)
T ss_pred             EEcCCcHHHHH----------------HHHHHHHCCCc--eEEEEcccccccccchhhhcccceeEEEeccccHHHHHHH
Confidence            44567788877                88888877754  44444433332111    1112334899999999999999


Q ss_pred             hhcCcEEEeccccccccc---------------hHHHHHHHHcCCCE
Q psy1304         123 AKKCRVILNCVGPYTWYG---------------EAVVKACIEAKTHH  154 (184)
Q Consensus       123 l~~~dVVIN~aGPf~~~g---------------~~VaeACieAGthY  154 (184)
                      ++++|+|++||.|....+               .+|+++|.+.|+.+
T Consensus        64 ~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~Vkr  110 (280)
T PF01073_consen   64 LEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKR  110 (280)
T ss_pred             hcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence            999999999988753322               78999999999994

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.69  E-value=0.00029  Score=60.73  Aligned_cols=93  Identities=12%  Similarity=-0.024  Sum_probs=66.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+.++|-|.-                ++.+|.+..    -++....|+...... ...+++++..|+.|++++.+++++
T Consensus         5 VtGatG~iG~~----------------lv~~Ll~~g----~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g   64 (317)
T CHL00194          5 VIGATGTLGRQ----------------IVRQALDEG----YQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKG   64 (317)
T ss_pred             EECCCcHHHHH----------------HHHHHHHCC----CeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCC
Confidence            46777888877                777887653    345444555322110 114688999999999999999999


Q ss_pred             CcEEEecccccccc-----------chHHHHHHHHcCCC-EeeCCC
Q psy1304         126 CRVILNCVGPYTWY-----------GEAVVKACIEAKTH-HVDITG  159 (184)
Q Consensus       126 ~dVVIN~aGPf~~~-----------g~~VaeACieAGth-YVDltG  159 (184)
                      +|+||||+++....           ..++++||.++|+. +|-++.
T Consensus        65 ~d~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss  110 (317)
T CHL00194         65 VTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI  110 (317)
T ss_pred             CCEEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence            99999998754321           15799999999984 666554

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.55  E-value=9.4e-05  Score=60.56  Aligned_cols=77  Identities=12%  Similarity=0.114  Sum_probs=55.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccc--ccc-CCCCCCEEEEeCCCHHHHHHHhhcCcEEEecccccc----ccchHHHHH
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCL--YRE-NLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYT----WYGEAVVKA  146 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~l--g~~-~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~----~~g~~VaeA  146 (184)
                      ++.+|.+  ++  .++-..-|+...  ... .....+++.+|.+|+++|.++++++|.|+.+.++..    ....++++|
T Consensus        14 v~~~L~~--~~--~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~~~~~~li~A   89 (233)
T PF05368_consen   14 VVRALLS--AG--FSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSELEQQKNLIDA   89 (233)
T ss_dssp             HHHHHHH--TT--GCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHHHHHHHHHHH
T ss_pred             HHHHHHh--CC--CCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhhhhhhhHHHh
Confidence            8888888  44  666666565321  100 114578999999999999999999999999998662    334899999


Q ss_pred             HHHcCCCE
Q psy1304         147 CIEAKTHH  154 (184)
Q Consensus       147 CieAGthY  154 (184)
                      |.++|+.+
T Consensus        90 a~~agVk~   97 (233)
T PF05368_consen   90 AKAAGVKH   97 (233)
T ss_dssp             HHHHT-SE
T ss_pred             hhccccce
Confidence            99999994

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.06  E-value=0.00074  Score=65.21  Aligned_cols=101  Identities=15%  Similarity=0.090  Sum_probs=65.6

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----------------CCCCCCEEEEeCC
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----------------NLIDIPIIIADLK  114 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----------------~~~~v~~v~vDv~  114 (184)
                      .-+.||++-|-|--   .+---+++.+|++.  +  .+|.+..|+.+....                ...++.++++|+.
T Consensus        76 ~~~~gKvVLVTGAT---GgIG~aLAr~LLk~--G--~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt  148 (576)
T PLN03209         76 DTKDEDLAFVAGAT---GKVGSRTVRELLKL--G--FRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE  148 (576)
T ss_pred             ccCCCCEEEEECCC---CHHHHHHHHHHHHC--C--CeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCC
Confidence            34667777666621   11111255666654  3  566666675432110                0134789999999


Q ss_pred             CHHHHHHHhhcCcEEEeccccccc--------------cchHHHHHHHHcCCC-EeeCC
Q psy1304         115 NESSILIMAKKCRVILNCVGPYTW--------------YGEAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       115 D~~sL~a~l~~~dVVIN~aGPf~~--------------~g~~VaeACieAGth-YVDlt  158 (184)
                      |.+++.+.+.++|+||||+|....              ....++++|.+.|+. +|-++
T Consensus       149 D~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VS  207 (576)
T PLN03209        149 KPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVT  207 (576)
T ss_pred             CHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEc
Confidence            999999999999999999996521              126788999998874 66554

>KOG2865|consensus

Probab=96.92  E-value=0.002  Score=58.79  Aligned_cols=57  Identities=25%  Similarity=0.394  Sum_probs=51.1

Q ss_pred             CCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccc------------hHHHHHHHHcCCC-EeeCC
Q psy1304         102 NLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYG------------EAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       102 ~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g------------~~VaeACieAGth-YVDlt  158 (184)
                      .++++-+...|+.|++++.++++.+.||||.+|--+.++            +.+++.|-++|+. ||+++
T Consensus       107 dLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS  176 (391)
T KOG2865|consen  107 DLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVS  176 (391)
T ss_pred             cccceeeeccCCCCHHHHHHHHHhCcEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehh
Confidence            457889999999999999999999999999999766554            7899999999998 99976

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=96.90  E-value=0.0034  Score=52.24  Aligned_cols=93  Identities=8%  Similarity=0.045  Sum_probs=61.1

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc-----ccccc--CCCCCCEEEEeCCCHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD-----CLYRE--NLIDIPIIIADLKNESSI  119 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~-----~lg~~--~~~~v~~v~vDv~D~~sL  119 (184)
                      |.+.++|-|+.                ++.+|.+..++  .++.+..|..     ..-..  ...+++++.+|+.|++++
T Consensus         4 ItGatG~iG~~----------------l~~~l~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   65 (317)
T TIGR01181         4 VTGGAGFIGSN----------------FVRYILNEHPD--AEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELV   65 (317)
T ss_pred             EEcCCchHHHH----------------HHHHHHHhCCC--CEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHH
Confidence            45666777777                67777766655  4554443311     00000  113578899999999999


Q ss_pred             HHHhhc--CcEEEecccccccc----------------chHHHHHHHHc--CCCEeeC
Q psy1304         120 LIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEA--KTHHVDI  157 (184)
Q Consensus       120 ~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieA--GthYVDl  157 (184)
                      .+++++  +|+||||+|+....                ...++++|.+.  +..++-+
T Consensus        66 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~  123 (317)
T TIGR01181        66 SRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHI  123 (317)
T ss_pred             HHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence            999998  89999999975421                14688899886  3355544

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.84  E-value=0.005  Score=55.58  Aligned_cols=55  Identities=15%  Similarity=0.211  Sum_probs=44.6

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh----cCcEEEeccccccc-----------cchHHHHHHHHcCCC-EeeCC
Q psy1304         104 IDIPIIIADLKNESSILIMAK----KCRVILNCVGPYTW-----------YGEAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~----~~dVVIN~aGPf~~-----------~g~~VaeACieAGth-YVDlt  158 (184)
                      .+++++++|+.|++++.++++    ++|+||||+|+...           ...+++++|.+.|+. +|-++
T Consensus       111 ~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iS  181 (390)
T PLN02657        111 PGAEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLS  181 (390)
T ss_pred             CCceEEEeeCCCHHHHHHHHHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEe
Confidence            468899999999999999998    59999999986421           125789999999986 66554

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=96.82  E-value=0.0073  Score=50.78  Aligned_cols=87  Identities=17%  Similarity=0.326  Sum_probs=60.8

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+.++|-|+.                ++.+|++..    -++....|+...... ....++++.+|+.|++++.+++++
T Consensus         5 ItG~~G~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~   64 (328)
T TIGR03466         5 VTGATGFVGSA----------------VVRLLLEQG----EEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAG   64 (328)
T ss_pred             EECCccchhHH----------------HHHHHHHCC----CEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhC
Confidence            45667777776                677777654    345555565433211 113578999999999999999999


Q ss_pred             CcEEEeccccccccc--------------hHHHHHHHHcCCC
Q psy1304         126 CRVILNCVGPYTWYG--------------EAVVKACIEAKTH  153 (184)
Q Consensus       126 ~dVVIN~aGPf~~~g--------------~~VaeACieAGth  153 (184)
                      +|+|||+++++....              ..++++|.+.++.
T Consensus        65 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  106 (328)
T TIGR03466        65 CRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVE  106 (328)
T ss_pred             CCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999999998652211              5678889988763

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02214 cinnamoyl-CoA reductase

Probab=96.80  E-value=0.0038  Score=54.68  Aligned_cols=49  Identities=22%  Similarity=0.304  Sum_probs=41.7

Q ss_pred             CCCEEEEeCCCHHHHHHHhhcCcEEEecccccccc-----------chHHHHHHHHcCCC
Q psy1304         105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWY-----------GEAVVKACIEAKTH  153 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~-----------g~~VaeACieAGth  153 (184)
                      +++++.+|+.|++++.++++++|+||||+||+...           -..++++|.++|+.
T Consensus        61 ~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~  120 (342)
T PLN02214         61 RLILCKADLQDYEALKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVK  120 (342)
T ss_pred             cEEEEecCcCChHHHHHHHhcCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            46788999999999999999999999999997532           15789999999874

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.74  E-value=0.005  Score=51.75  Aligned_cols=90  Identities=6%  Similarity=-0.126  Sum_probs=64.5

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHh---
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMA---  123 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l---  123 (184)
                      |.+.++|-|+.                ++.+|.+..    .++....|+....  ....++.+.+|.+|+++|.+++   
T Consensus         4 VtGatG~iG~~----------------vv~~L~~~g----~~V~~~~R~~~~~--~~~~~~~~~~d~~d~~~l~~a~~~~   61 (285)
T TIGR03649         4 LTGGTGKTASR----------------IARLLQAAS----VPFLVASRSSSSS--AGPNEKHVKFDWLDEDTWDNPFSSD   61 (285)
T ss_pred             EEcCCChHHHH----------------HHHHHHhCC----CcEEEEeCCCccc--cCCCCccccccCCCHHHHHHHHhcc
Confidence            45677777776                777887653    3444555655432  2256778889999999999999   


Q ss_pred             ---hc-CcEEEeccccccc---cchHHHHHHHHcCCC-EeeCC
Q psy1304         124 ---KK-CRVILNCVGPYTW---YGEAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       124 ---~~-~dVVIN~aGPf~~---~g~~VaeACieAGth-YVDlt  158 (184)
                         ++ +|.|+.|.++...   ...+++++|.++|+. +|-++
T Consensus        62 ~~~~g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~S  104 (285)
T TIGR03649        62 DGMEPEISAVYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLS  104 (285)
T ss_pred             cCcCCceeEEEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEee
Confidence               67 9999999876532   246889999999985 55444

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG0172|consensus

Probab=96.51  E-value=0.0049  Score=57.69  Aligned_cols=101  Identities=16%  Similarity=0.205  Sum_probs=75.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc--CCCCCCEEEEeCCCHH-HHHHHhhcCcEEEeccccccccchHHHHHHHHc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE--NLIDIPIIIADLKNES-SILIMAKKCRVILNCVGPYTWYGEAVVKACIEA  150 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~--~~~~v~~v~vDv~D~~-sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieA  150 (184)
                      .+.|||+. .+  +.|.+|.+....++.  .-.+++.+.+|+.|++ .|++.++..|+|++.. ||..+ .-|+++|+..
T Consensus        17 ~~d~ls~~-~d--v~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSLl-P~t~h-~lVaK~~i~~   91 (445)
T KOG0172|consen   17 VADFLSRK-KD--VNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISLL-PYTFH-PLVAKGCIIT   91 (445)
T ss_pred             HHHHHhhc-CC--ceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeeec-cchhh-HHHHHHHHHh
Confidence            45677743 45  788888864432221  1145899999999988 9999999999999997 88654 7899999999


Q ss_pred             CCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         151 KTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       151 GthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +.|-+--+    |+..-..++++.|+.+|++++
T Consensus        92 ~~~~vtsS----yv~pe~~~L~~~~v~AG~ti~  120 (445)
T KOG0172|consen   92 KEDSVTSS----YVDPELEELEKAAVPAGSTIM  120 (445)
T ss_pred             hccccccc----ccCHHHHhhhhhccCCCceEe
Confidence            99866543    222223678999999999986

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=96.50  E-value=0.0092  Score=51.93  Aligned_cols=83  Identities=8%  Similarity=0.113  Sum_probs=56.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc-----cCCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccc----c-----
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR-----ENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTW----Y-----  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~-----~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~----~-----  139 (184)
                      ++.+|+...+.  .+|.+..|+.....     ....++.++.+|+.|++++.++++++|+|||++|....    .     
T Consensus        20 l~~~L~~~g~~--~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~   97 (324)
T TIGR03589        20 FISRLLENYNP--KKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNPFEC   97 (324)
T ss_pred             HHHHHHHhCCC--cEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECcccCCCchhhcCHHHH
Confidence            56666655433  45665555432210     01135788999999999999999999999999995321    1     


Q ss_pred             -------chHHHHHHHHcCCC-EeeCC
Q psy1304         140 -------GEAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       140 -------g~~VaeACieAGth-YVDlt  158 (184)
                             ...++++|.+.|+. .|-++
T Consensus        98 ~~~Nv~g~~~ll~aa~~~~~~~iV~~S  124 (324)
T TIGR03589        98 IRTNINGAQNVIDAAIDNGVKRVVALS  124 (324)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEe
Confidence                   15788999999874 55554

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.0058  Score=50.57  Aligned_cols=58  Identities=14%  Similarity=0.119  Sum_probs=43.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++..|++.  +  -++.+.+|+..... ...++.++++|+.|++++++++++       .|+||||+|+.
T Consensus        20 ~a~~l~~~--g--~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~   84 (270)
T PRK06179         20 TAEKLARA--G--YRVFGTSRNPARAA-PIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVG   84 (270)
T ss_pred             HHHHHHHC--C--CEEEEEeCChhhcc-ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            56666654  3  56777777654322 335788999999999999999885       59999999975

>PLN02427 UDP-apiose/xylose synthase

Probab=96.36  E-value=0.01  Score=52.45  Aligned_cols=94  Identities=15%  Similarity=0.074  Sum_probs=61.7

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc-------cc-cCCCCCCEEEEeCCCHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL-------YR-ENLIDIPIIIADLKNES  117 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l-------g~-~~~~~v~~v~vDv~D~~  117 (184)
                      .|-+.++|-|.-                ++.+|.... +  -+|....|+...       +. ....+++++..|+.|.+
T Consensus        18 lVTGgtGfIGs~----------------lv~~L~~~~-g--~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~   78 (386)
T PLN02427         18 CMIGAGGFIGSH----------------LCEKLMTET-P--HKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDS   78 (386)
T ss_pred             EEECCcchHHHH----------------HHHHHHhcC-C--CEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChH
Confidence            457778888877                667776542 2  233323333221       00 01136889999999999


Q ss_pred             HHHHHhhcCcEEEecccccc-----cc-----------chHHHHHHHHcCCCEeeCC
Q psy1304         118 SILIMAKKCRVILNCVGPYT-----WY-----------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~-----~~-----------g~~VaeACieAGthYVDlt  158 (184)
                      .+.++++++|+|||||+...     ..           ..+++++|.+.|..+|-++
T Consensus        79 ~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~S  135 (386)
T PLN02427         79 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS  135 (386)
T ss_pred             HHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence            99999999999999998321     10           1467888988886666554

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=96.28  E-value=0.021  Score=49.46  Aligned_cols=86  Identities=14%  Similarity=0.068  Sum_probs=58.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc------cc---c----CCCCCCEEEEeC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL------YR---E----NLIDIPIIIADL  113 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l------g~---~----~~~~v~~v~vDv  113 (184)
                      |-+.++|=|.-                ++.+|....    .+|.+..|+...      ..   .    ...+++++++|+
T Consensus         5 VTGatGfIG~~----------------l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl   64 (343)
T TIGR01472         5 ITGITGQDGSY----------------LAEFLLEKG----YEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDL   64 (343)
T ss_pred             EEcCCCcHHHH----------------HHHHHHHCC----CEEEEEecCCcccchhhhhhhhhccccccccceeEEEecc
Confidence            45667787777                667776553    445555554321      00   0    013478999999


Q ss_pred             CCHHHHHHHhhc--CcEEEecccccccc---------------c-hHHHHHHHHcCC
Q psy1304         114 KNESSILIMAKK--CRVILNCVGPYTWY---------------G-EAVVKACIEAKT  152 (184)
Q Consensus       114 ~D~~sL~a~l~~--~dVVIN~aGPf~~~---------------g-~~VaeACieAGt  152 (184)
                      .|.+++.+++++  +|+|||||++....               | .+++++|.++|+
T Consensus        65 ~d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~  121 (343)
T TIGR01472        65 TDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGL  121 (343)
T ss_pred             CCHHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999999996  59999999863210               1 578999999885

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.26  E-value=0.0016  Score=50.06  Aligned_cols=116  Identities=8%  Similarity=-0.027  Sum_probs=66.3

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCC--EEEEeCCCHHHHHHHhhcCcEEE
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIP--IIIADLKNESSILIMAKKCRVIL  130 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~--~v~vDv~D~~sL~a~l~~~dVVI  130 (184)
                      ++++.+.+-|-=.-|+.    ++.+|++.. .  -++.+.+|+.+..........  .+..+..|.   .++++++|+||
T Consensus        17 ~~~~~i~iiG~G~~g~~----~a~~l~~~g-~--~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi   86 (155)
T cd01065          17 LKGKKVLILGAGGAARA----VAYALAELG-A--AKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLII   86 (155)
T ss_pred             CCCCEEEEECCcHHHHH----HHHHHHHCC-C--CEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEE
Confidence            45566665552111222    555665543 3  467777765443221111111  122344443   34478999999


Q ss_pred             eccccccc--cchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         131 NCVGPYTW--YGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       131 N~aGPf~~--~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +|++|...  ........++..|+..+|++-.+...     .+.+++++.|+.++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~-----~l~~~~~~~g~~~v  136 (155)
T cd01065          87 NTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLET-----PLLKEARALGAKTI  136 (155)
T ss_pred             eCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCC-----HHHHHHHHCCCcee
Confidence            99987764  23344456788999999997554322     46667888887665

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.04  E-value=0.011  Score=50.80  Aligned_cols=64  Identities=16%  Similarity=0.114  Sum_probs=43.3

Q ss_pred             CHHHHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         115 NESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       115 D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      ...+++++++++|+||++..|...  ..++++|+++|+|.|  .|-+.|..+-.+++.+.++..++.+
T Consensus        50 ~~~dl~~ll~~~DvVid~t~p~~~--~~~~~~al~~G~~vv--igttG~s~~~~~~l~~aa~~~~v~~  113 (257)
T PRK00048         50 ITDDLEAVLADADVLIDFTTPEAT--LENLEFALEHGKPLV--IGTTGFTEEQLAELEEAAKKIPVVI  113 (257)
T ss_pred             ccCCHHHhccCCCEEEECCCHHHH--HHHHHHHHHcCCCEE--EECCCCCHHHHHHHHHHhcCCCEEE
Confidence            344577778899999999977654  689999999999966  2333333332356666554445443

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=96.01  E-value=0.022  Score=48.26  Aligned_cols=50  Identities=16%  Similarity=0.334  Sum_probs=40.2

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhcCcEEEecccccccc-c--------------hHHHHHHHHc-CCC
Q psy1304         104 IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWY-G--------------EAVVKACIEA-KTH  153 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~-g--------------~~VaeACieA-Gth  153 (184)
                      .+++++..|+.|++++.++++++|.|||++||.... .              ..++++|.+. ++.
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  120 (322)
T PLN02662         55 ERLHLFKANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVK  120 (322)
T ss_pred             CceEEEeccccCcchHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            367889999999999999999999999999985321 0              4578888887 663

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=96.01  E-value=0.021  Score=47.65  Aligned_cols=52  Identities=10%  Similarity=0.139  Sum_probs=40.2

Q ss_pred             CCCEEEEeCCCHHHHHHHhh--cCcEEEecccccccc----------------chHHHHHHHHcCCC-Eee
Q psy1304         105 DIPIIIADLKNESSILIMAK--KCRVILNCVGPYTWY----------------GEAVVKACIEAKTH-HVD  156 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~----------------g~~VaeACieAGth-YVD  156 (184)
                      +++++.+|+.|++++.++++  +.|+||||+|+....                ...++++|.+.|+. +|=
T Consensus        48 ~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  118 (328)
T TIGR01179        48 RVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIF  118 (328)
T ss_pred             ceEEEECCCCCHHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEE
Confidence            46688999999999999997  689999999965221                14678889988853 443

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=96.00  E-value=0.019  Score=50.19  Aligned_cols=91  Identities=14%  Similarity=0.024  Sum_probs=61.5

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc-----c-------cccCCCCCCEEEEeC
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC-----L-------YRENLIDIPIIIADL  113 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~-----l-------g~~~~~~v~~v~vDv  113 (184)
                      .|-+.++|-|..                ++.+|.+....  + +++. |...     +       +.....++.++..|+
T Consensus        19 lVtGatGfiG~~----------------lv~~L~~~g~~--V-~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di   78 (348)
T PRK15181         19 LITGVAGFIGSG----------------LLEELLFLNQT--V-IGLD-NFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI   78 (348)
T ss_pred             EEECCccHHHHH----------------HHHHHHHCCCE--E-EEEe-CCCCcchhhhhhhhhccccccCCceEEEEccC
Confidence            347888999988                67777765433  2 2332 2111     1       000113577899999


Q ss_pred             CCHHHHHHHhhcCcEEEeccccccc----c------------chHHHHHHHHcCCC-Eee
Q psy1304         114 KNESSILIMAKKCRVILNCVGPYTW----Y------------GEAVVKACIEAKTH-HVD  156 (184)
Q Consensus       114 ~D~~sL~a~l~~~dVVIN~aGPf~~----~------------g~~VaeACieAGth-YVD  156 (184)
                      .|.+.+.++++++|+|||+|+....    .            ..+++++|.+.|+. +|-
T Consensus        79 ~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~  138 (348)
T PRK15181         79 RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTY  138 (348)
T ss_pred             CCHHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence            9999999999999999999974221    1            15899999999984 443

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=95.99  E-value=0.017  Score=48.17  Aligned_cols=78  Identities=12%  Similarity=0.074  Sum_probs=55.5

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|+.                ++.+|....    -++.+..|+              ..|+.|++++.++++++
T Consensus         4 v~G~tG~iG~~----------------l~~~l~~~g----~~v~~~~r~--------------~~d~~~~~~~~~~~~~~   49 (287)
T TIGR01214         4 ITGANGQLGRE----------------LVQQLSPEG----RVVVALTSS--------------QLDLTDPEALERLLRAI   49 (287)
T ss_pred             EEcCCCHHHHH----------------HHHHHHhcC----CEEEEeCCc--------------ccCCCCHHHHHHHHHhC
Confidence            46677888887                777777653    233333332              47899999999999986


Q ss_pred             --cEEEecccccccc----------------chHHHHHHHHcCCCEeeCC
Q psy1304         127 --RVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       127 --dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDlt  158 (184)
                        |+||||+|+....                ...++++|.+.|.++|-++
T Consensus        50 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~S   99 (287)
T TIGR01214        50 RPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHIS   99 (287)
T ss_pred             CCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence              9999999974211                2567888988887766544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN00198 anthocyanidin reductase; Provisional

Probab=95.95  E-value=0.013  Score=50.46  Aligned_cols=97  Identities=20%  Similarity=0.168  Sum_probs=58.0

Q ss_pred             cccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc--------ccCCCCCCEEEEeCCCHHHH
Q psy1304          48 GESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY--------RENLIDIPIIIADLKNESSI  119 (184)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg--------~~~~~~v~~v~vDv~D~~sL  119 (184)
                      ++-+||+|+++-|.|-       +--|-.+|++..-..--++.+-.|+....        ....++++++.+|+.|++++
T Consensus         2 ~~~~~~~~~~vlItG~-------~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   74 (338)
T PLN00198          2 ATLTPTGKKTACVIGG-------TGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESF   74 (338)
T ss_pred             CcccCCCCCeEEEECC-------chHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHH
Confidence            3457788887777661       11244444422111113443333433210        00113577889999999999


Q ss_pred             HHHhhcCcEEEecccccccc-c--------------hHHHHHHHHcC
Q psy1304         120 LIMAKKCRVILNCVGPYTWY-G--------------EAVVKACIEAK  151 (184)
Q Consensus       120 ~a~l~~~dVVIN~aGPf~~~-g--------------~~VaeACieAG  151 (184)
                      ..+++++|.|||+|+|.... .              ..++++|.+.+
T Consensus        75 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~  121 (338)
T PLN00198         75 EAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK  121 (338)
T ss_pred             HHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999964211 0              35778887763

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=95.92  E-value=0.019  Score=46.47  Aligned_cols=61  Identities=11%  Similarity=0.067  Sum_probs=42.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh---cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK---KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~---~~dVVIN~aGPf~  137 (184)
                      ++.+|++..++  ..+.+..|+.... ....++.++++|+.|+++++++.+   +.|+|||++|...
T Consensus        16 ia~~l~~~~~~--~~v~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~~   79 (235)
T PRK09009         16 MVKQLLERYPD--ATVHATYRHHKPD-FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGMLH   79 (235)
T ss_pred             HHHHHHHhCCC--CEEEEEccCCccc-cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcccc
Confidence            77888877666  5655544433221 122567789999999998877654   6899999999763

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.013  Score=48.08  Aligned_cols=76  Identities=16%  Similarity=0.163  Sum_probs=49.3

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC------
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC------  126 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~------  126 (184)
                      |+||+.-|-|-   .++--..++.+|++.  +  .++.+.+|+.+. ......+.++++|+.|++++.++++..      
T Consensus         4 ~~~k~~lItGa---s~gIG~~la~~l~~~--g--~~v~~~~r~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          4 LTGRVVLVTGG---TRGIGAGIARAFLAA--G--ATVVVCGRRAPE-TVDGRPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCCCEEEEeCC---CchHHHHHHHHHHHC--C--CEEEEEeCChhh-hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56676666551   112011144555543  3  578888887643 112246789999999999999988754      


Q ss_pred             -cEEEeccccc
Q psy1304         127 -RVILNCVGPY  136 (184)
Q Consensus       127 -dVVIN~aGPf  136 (184)
                       |+|||++|..
T Consensus        76 id~vi~~ag~~   86 (252)
T PRK07856         76 LDVLVNNAGGS   86 (252)
T ss_pred             CCEEEECCCCC
Confidence             9999999854

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=95.84  E-value=0.029  Score=49.95  Aligned_cols=92  Identities=9%  Similarity=-0.071  Sum_probs=61.2

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC-CCCCEEEEeCCCHHHHHHHhh
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL-IDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~-~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .|.+.++|-|.-                ++.+|.+..    -+|....|+.....+.. ...+++..|+.|.+.+.++++
T Consensus        25 lVtGgtGfIG~~----------------l~~~L~~~G----~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   84 (370)
T PLN02695         25 CITGAGGFIASH----------------IARRLKAEG----HYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTK   84 (370)
T ss_pred             EEECCccHHHHH----------------HHHHHHhCC----CEEEEEEeccccccccccccceEEECCCCCHHHHHHHHh
Confidence            346777787776                677777643    34444445332111111 125788899999999999999


Q ss_pred             cCcEEEeccccccc-----------------cchHHHHHHHHcCC-CEeeC
Q psy1304         125 KCRVILNCVGPYTW-----------------YGEAVVKACIEAKT-HHVDI  157 (184)
Q Consensus       125 ~~dVVIN~aGPf~~-----------------~g~~VaeACieAGt-hYVDl  157 (184)
                      ++|+||||++....                 ...+++++|.+.|+ ++|-+
T Consensus        85 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~  135 (370)
T PLN02695         85 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYA  135 (370)
T ss_pred             CCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence            99999999976420                 01579999999998 45544

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=95.80  E-value=0.032  Score=48.65  Aligned_cols=52  Identities=10%  Similarity=0.173  Sum_probs=45.7

Q ss_pred             CCEEEEeCCCHHHHHHHhhc--CcEEEeccccccc-cchHHHHHHHHcCCCEeeC
Q psy1304         106 IPIIIADLKNESSILIMAKK--CRVILNCVGPYTW-YGEAVVKACIEAKTHHVDI  157 (184)
Q Consensus       106 v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~-~g~~VaeACieAGthYVDl  157 (184)
                      ...+..+..|.+++.+++++  .|+||+++.||.. ...+++++|.+.|++|+.+
T Consensus        44 ~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~   98 (256)
T TIGR00715        44 ALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQITTNATAVCKELGIPYVRF   98 (256)
T ss_pred             CceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEE
Confidence            34677888899999999986  8999999999974 4689999999999999998

This enzyme was found to be a monomer by gel filtration.

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=95.77  E-value=0.0094  Score=52.06  Aligned_cols=80  Identities=14%  Similarity=0.055  Sum_probs=56.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc---cCCCCCCEEEEeCCCHHHHHHHhhc----
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR---ENLIDIPIIIADLKNESSILIMAKK----  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~---~~~~~v~~v~vDv~D~~sL~a~l~~----  125 (184)
                      ++|-|+-+.|   -+-|    |--.||+..-..-=++-+.|||++.-.   +..+.....+||+.|.++++++++.    
T Consensus         3 ~tgnTiLITG---G~sG----IGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           3 TTGNTILITG---GASG----IGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             ccCcEEEEeC---Ccch----hhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhh
Confidence            5677766655   1122    778888655431137889999885322   2336788999999999998888764    


Q ss_pred             ---CcEEEecccccccc
Q psy1304         126 ---CRVILNCVGPYTWY  139 (184)
Q Consensus       126 ---~dVVIN~aGPf~~~  139 (184)
                         -+++|||||-....
T Consensus        76 ~P~lNvliNNAGIqr~~   92 (245)
T COG3967          76 YPNLNVLINNAGIQRNE   92 (245)
T ss_pred             CCchheeeecccccchh
Confidence               68999999988776

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=95.67  E-value=0.057  Score=46.63  Aligned_cols=87  Identities=11%  Similarity=0.005  Sum_probs=58.5

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc-cc---c--------CCCCCCEEEEeC
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL-YR---E--------NLIDIPIIIADL  113 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l-g~---~--------~~~~v~~v~vDv  113 (184)
                      .|-+.++|-|.-                ++..|+...    .++.+..|+... ..   +        ....++++.+|+
T Consensus        10 lVTGatGfiG~~----------------l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl   69 (340)
T PLN02653         10 LITGITGQDGSY----------------LTEFLLSKG----YEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDL   69 (340)
T ss_pred             EEECCCCccHHH----------------HHHHHHHCC----CEEEEEecccccccccchhhhccccccccCceEEEEecC
Confidence            346677777777                677777654    345444454321 00   0        013478899999


Q ss_pred             CCHHHHHHHhhc--CcEEEeccccccc------------c----chHHHHHHHHcCC
Q psy1304         114 KNESSILIMAKK--CRVILNCVGPYTW------------Y----GEAVVKACIEAKT  152 (184)
Q Consensus       114 ~D~~sL~a~l~~--~dVVIN~aGPf~~------------~----g~~VaeACieAGt  152 (184)
                      .|.+++.+++++  .|+||||||....            .    ...++++|.+.++
T Consensus        70 ~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~  126 (340)
T PLN02653         70 SDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQ  126 (340)
T ss_pred             CCHHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999986  5999999996321            0    1677899998885

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=95.62  E-value=0.013  Score=52.16  Aligned_cols=47  Identities=23%  Similarity=0.400  Sum_probs=41.0

Q ss_pred             EeCCCHHHHHHHhhc--CcEEEeccccccccc-----------------hHHHHHHHHcCCCEeeCC
Q psy1304         111 ADLKNESSILIMAKK--CRVILNCVGPYTWYG-----------------EAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       111 vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~g-----------------~~VaeACieAGthYVDlt  158 (184)
                      +|+.|++.+.+++++  .|+||||| .|....                 .+++++|.+.|..+|.++
T Consensus        34 ~Ditd~~~v~~~i~~~~PDvVIn~A-Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiS   99 (281)
T COG1091          34 LDITDPDAVLEVIRETRPDVVINAA-AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHIS   99 (281)
T ss_pred             ccccChHHHHHHHHhhCCCEEEECc-cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEee
Confidence            799999999999995  59999999 465543                 689999999999999887

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.61  E-value=0.0096  Score=49.49  Aligned_cols=82  Identities=12%  Similarity=0.016  Sum_probs=50.6

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |..++||+.-|-|--. +||----++.+|++.  +  .++.+.+|++.....    ......++++|+.|+++++++++.
T Consensus         2 ~~~l~~k~~lItGas~-~~gIG~a~a~~la~~--G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   76 (252)
T PRK06079          2 SGILSGKKIVVMGVAN-KRSIAWGCAQAIKDQ--G--ATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFAT   76 (252)
T ss_pred             ccccCCCEEEEeCCCC-CCchHHHHHHHHHHC--C--CEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHH
Confidence            3457888888877320 022111144444443  4  678888876432110    113467899999999999887653


Q ss_pred             -------CcEEEeccccc
Q psy1304         126 -------CRVILNCVGPY  136 (184)
Q Consensus       126 -------~dVVIN~aGPf  136 (184)
                             .|++||++|..
T Consensus        77 ~~~~~g~iD~lv~nAg~~   94 (252)
T PRK06079         77 IKERVGKIDGIVHAIAYA   94 (252)
T ss_pred             HHHHhCCCCEEEEccccc
Confidence                   69999999854

>PRK06182 short chain dehydrogenase; Validated

Probab=95.49  E-value=0.021  Score=47.61  Aligned_cols=59  Identities=15%  Similarity=0.076  Sum_probs=41.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  -++.+.+|+.+...+. ..++.++++|+.|+++++++++       +.|+|||++|+.
T Consensus        19 la~~l~~~--G--~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~   85 (273)
T PRK06182         19 TARRLAAQ--G--YTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYG   85 (273)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence            55555543  3  5677777765422111 1358899999999999999887       689999999964

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=95.48  E-value=0.037  Score=47.98  Aligned_cols=92  Identities=21%  Similarity=0.139  Sum_probs=59.0

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--CCCCCCEEEEeCC-CHHHHHHHh
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--NLIDIPIIIADLK-NESSILIMA  123 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--~~~~v~~v~vDv~-D~~sL~a~l  123 (184)
                      |.+.++|-|..                ++.+|.... +  -.|....|+......  ...+++++..|+. |.+.+.+++
T Consensus         6 VtGatGfiGs~----------------l~~~L~~~~-~--~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   66 (347)
T PRK11908          6 ILGVNGFIGHH----------------LSKRILETT-D--WEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHV   66 (347)
T ss_pred             EECCCcHHHHH----------------HHHHHHhCC-C--CeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHH
Confidence            46677887777                556665432 2  223333343221110  1245889999997 778899999


Q ss_pred             hcCcEEEeccccccc----------------cchHHHHHHHHcCCCEeeC
Q psy1304         124 KKCRVILNCVGPYTW----------------YGEAVVKACIEAKTHHVDI  157 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~----------------~g~~VaeACieAGthYVDl  157 (184)
                      +++|+||||++....                ...+++++|.+.|.++|-+
T Consensus        67 ~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~  116 (347)
T PRK11908         67 KKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFP  116 (347)
T ss_pred             cCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence            999999999874211                0147899999998776643

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.46  E-value=0.021  Score=48.78  Aligned_cols=49  Identities=22%  Similarity=0.365  Sum_probs=39.1

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhcCcEEEecccccccc---------------chHHHHHHHHc-CC
Q psy1304         104 IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWY---------------GEAVVKACIEA-KT  152 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~---------------g~~VaeACieA-Gt  152 (184)
                      .+++++..|+.|++++.++++++|+|||+|||+...               ...++++|.+. ++
T Consensus        56 ~~~~~~~~Dl~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v  120 (322)
T PLN02986         56 ERLKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSV  120 (322)
T ss_pred             CceEEEecCCCCcchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCc
Confidence            467899999999999999999999999999985210               04567888875 54

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.42  E-value=0.015  Score=46.47  Aligned_cols=87  Identities=15%  Similarity=0.164  Sum_probs=62.1

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc-cCCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR-ENLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~-~~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+.++|-|.-                ++.+|.+....  + +++..+++.... ....++++..+|+.|.+.+.++++.
T Consensus         3 I~GatG~iG~~----------------l~~~l~~~g~~--v-~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~   63 (236)
T PF01370_consen    3 ITGATGFIGSA----------------LVRQLLKKGHE--V-IVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEK   63 (236)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTTTE--E-EEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHH
T ss_pred             EEccCCHHHHH----------------HHHHHHHcCCc--c-ccccccccccccccccceEEEEEeeccccccccccccc
Confidence            56778888877                77888876654  2 244433322211 0112788999999999999999999


Q ss_pred             C--cEEEeccccccc-----c-----------chHHHHHHHHcCC
Q psy1304         126 C--RVILNCVGPYTW-----Y-----------GEAVVKACIEAKT  152 (184)
Q Consensus       126 ~--dVVIN~aGPf~~-----~-----------g~~VaeACieAGt  152 (184)
                      .  |+|++++|+...     .           ...++++|.+.++
T Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~  108 (236)
T PF01370_consen   64 ANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGV  108 (236)
T ss_dssp             HTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCceEEEEeeccccccccccccccccccccccccccccccccccc
Confidence            8  999999998521     0           1688999999998

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=95.35  E-value=0.059  Score=51.54  Aligned_cols=94  Identities=10%  Similarity=0.137  Sum_probs=63.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc------cc-ccCCCCCCEEEEeCCCHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC------LY-RENLIDIPIIIADLKNESSI  119 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~------lg-~~~~~~v~~v~vDv~D~~sL  119 (184)
                      |.+.++|-|+.                ++.+|.+..++  .+|....+.+.      +. .....+++++.+|+.|++.+
T Consensus        11 VTGatGfIG~~----------------lv~~Ll~~g~~--~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~   72 (668)
T PLN02260         11 ITGAAGFIASH----------------VANRLIRNYPD--YKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLV   72 (668)
T ss_pred             EECCCcHHHHH----------------HHHHHHHhCCC--CEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHH
Confidence            46667788877                77888877666  55544333211      00 00124688999999999988


Q ss_pred             HHHh--hcCcEEEecccccccc----------------chHHHHHHHHcC-C-CEeeCC
Q psy1304         120 LIMA--KKCRVILNCVGPYTWY----------------GEAVVKACIEAK-T-HHVDIT  158 (184)
Q Consensus       120 ~a~l--~~~dVVIN~aGPf~~~----------------g~~VaeACieAG-t-hYVDlt  158 (184)
                      ..++  .++|+|||||+.....                ...++++|.+.| + ++|-++
T Consensus        73 ~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~S  131 (668)
T PLN02260         73 NYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS  131 (668)
T ss_pred             HHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Confidence            8776  6799999999975321                146899999987 3 466544

>PRK05865 hypothetical protein; Provisional

Probab=95.34  E-value=0.098  Score=52.88  Aligned_cols=91  Identities=14%  Similarity=0.059  Sum_probs=63.6

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|+.                ++.+|....    .++.+..|+....  ...++.++.+|+.|.+++.++++++
T Consensus         5 VTGATGfIGs~----------------La~~Ll~~G----~~Vv~l~R~~~~~--~~~~v~~v~gDL~D~~~l~~al~~v   62 (854)
T PRK05865          5 VTGASGVLGRG----------------LTARLLSQG----HEVVGIARHRPDS--WPSSADFIAADIRDATAVESAMTGA   62 (854)
T ss_pred             EECCCCHHHHH----------------HHHHHHHCc----CEEEEEECCchhh--cccCceEEEeeCCCHHHHHHHHhCC
Confidence            45667777776                666776543    3454454543211  1135789999999999999999999


Q ss_pred             cEEEeccccccc---c----chHHHHHHHHcCCC-EeeCCC
Q psy1304         127 RVILNCVGPYTW---Y----GEAVVKACIEAKTH-HVDITG  159 (184)
Q Consensus       127 dVVIN~aGPf~~---~----g~~VaeACieAGth-YVDltG  159 (184)
                      |+||||+++...   .    ..+++++|.+.|+. .|-++.
T Consensus        63 D~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS  103 (854)
T PRK05865         63 DVVAHCAWVRGRNDHINIDGTANVLKAMAETGTGRIVFTSS  103 (854)
T ss_pred             CEEEECCCcccchHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence            999999986421   1    25789999999974 666554

>PRK09186 flagellin modification protein A; Provisional

Probab=95.33  E-value=0.032  Score=45.44  Aligned_cols=59  Identities=14%  Similarity=0.090  Sum_probs=39.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc--------c-CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR--------E-NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~--------~-~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++..|++..    .++.+.+|+.+...        . ....+.++++|+.|++++.+++++       .|+||||+|+.
T Consensus        20 ~a~~l~~~g----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~   94 (256)
T PRK09186         20 LVKAILEAG----GIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPR   94 (256)
T ss_pred             HHHHHHHCC----CEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccc
Confidence            455555443    56667776543211        0 112355779999999999999885       69999999864

>PRK06398 aldose dehydrogenase; Validated

Probab=95.26  E-value=0.038  Score=45.96  Aligned_cols=73  Identities=11%  Similarity=0.188  Sum_probs=48.3

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh-------
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK-------  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~-------  124 (184)
                      .++||+.-|.|-   .+|----++.+|++.  +  .++.+.+|+....    .++.++++|+.|+++++++++       
T Consensus         3 ~l~gk~vlItGa---s~gIG~~ia~~l~~~--G--~~Vi~~~r~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          3 GLKDKVAIVTGG---SQGIGKAVVNRLKEE--G--SNVINFDIKEPSY----NDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCCCCEEEEECC---CchHHHHHHHHHHHC--C--CeEEEEeCCcccc----CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            367777777661   122001134444443  3  5677777765432    367899999999999988886       


Q ss_pred             cCcEEEecccc
Q psy1304         125 KCRVILNCVGP  135 (184)
Q Consensus       125 ~~dVVIN~aGP  135 (184)
                      +.|++||++|.
T Consensus        72 ~id~li~~Ag~   82 (258)
T PRK06398         72 RIDILVNNAGI   82 (258)
T ss_pred             CCCEEEECCCC
Confidence            47999999984

>PLN02650 dihydroflavonol-4-reductase

Probab=95.25  E-value=0.055  Score=47.01  Aligned_cols=85  Identities=18%  Similarity=0.207  Sum_probs=57.9

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc--------cC-CCCCCEEEEeCCCHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR--------EN-LIDIPIIIADLKNES  117 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~-~~~v~~v~vDv~D~~  117 (184)
                      |-+.++|-|..                ++.+|++..    .+|.+..|+.....        .. ..+++++..|+.|++
T Consensus        10 VTGatGfIGs~----------------l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~   69 (351)
T PLN02650         10 VTGASGFIGSW----------------LVMRLLERG----YTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEG   69 (351)
T ss_pred             EeCCcHHHHHH----------------HHHHHHHCC----CEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChh
Confidence            46677787776                667777653    44554455432110        00 124678999999999


Q ss_pred             HHHHHhhcCcEEEecccccccc--------------c-hHHHHHHHHcC
Q psy1304         118 SILIMAKKCRVILNCVGPYTWY--------------G-EAVVKACIEAK  151 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~~~--------------g-~~VaeACieAG  151 (184)
                      ++.++++++|.||||+++....              | ..++++|.+.+
T Consensus        70 ~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~  118 (351)
T PLN02650         70 SFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAK  118 (351)
T ss_pred             hHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcC
Confidence            9999999999999999864211              0 46789999877

>PLN02240 UDP-glucose 4-epimerase

Probab=95.24  E-value=0.082  Score=45.43  Aligned_cols=54  Identities=7%  Similarity=0.046  Sum_probs=41.3

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh--cCcEEEecccccccc----------------chHHHHHHHHcCCC-EeeC
Q psy1304         104 IDIPIIIADLKNESSILIMAK--KCRVILNCVGPYTWY----------------GEAVVKACIEAKTH-HVDI  157 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~----------------g~~VaeACieAGth-YVDl  157 (184)
                      .++.++.+|+.|++++.++++  ++|.||||+|.....                ...++++|.+.|+. +|-+
T Consensus        58 ~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  130 (352)
T PLN02240         58 DNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFS  130 (352)
T ss_pred             ccceEEecCcCCHHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence            357889999999999999987  689999999853210                14788999998864 5543

>PLN02253 xanthoxin dehydrogenase

Probab=95.12  E-value=0.021  Score=47.60  Aligned_cols=77  Identities=12%  Similarity=0.106  Sum_probs=49.1

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHH
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      ..++||++-|-|-   .+    -|..++++..  .+  .++.+.+|+++....      ...++.++++|+.|++++.++
T Consensus        14 ~~l~~k~~lItGa---s~----gIG~~la~~l~~~G--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   84 (280)
T PLN02253         14 QRLLGKVALVTGG---AT----GIGESIVRLFHKHG--AKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRA   84 (280)
T ss_pred             cccCCCEEEEECC---Cc----hHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHH
Confidence            3456676666651   11    2444444222  23  677777775432110      113577999999999999998


Q ss_pred             hh-------cCcEEEeccccc
Q psy1304         123 AK-------KCRVILNCVGPY  136 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf  136 (184)
                      ++       +.|+|||++|..
T Consensus        85 ~~~~~~~~g~id~li~~Ag~~  105 (280)
T PLN02253         85 VDFTVDKFGTLDIMVNNAGLT  105 (280)
T ss_pred             HHHHHHHhCCCCEEEECCCcC
Confidence            87       589999999853

>PRK07326 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.025  Score=45.56  Aligned_cols=60  Identities=10%  Similarity=0.080  Sum_probs=42.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---C---CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---N---LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~---~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      ++.+|++.  +  .++.+.+|+......   .   ..++.++++|+.|++++.++++       ++|+|||++|++.
T Consensus        22 la~~l~~~--g--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~   94 (237)
T PRK07326         22 IAEALLAE--G--YKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGH   94 (237)
T ss_pred             HHHHHHHC--C--CEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            55666643  4  567777775432110   0   0457789999999999998887       6899999999864

>PLN00016 RNA-binding protein; Provisional

Probab=95.09  E-value=0.039  Score=48.95  Aligned_cols=87  Identities=10%  Similarity=-0.000  Sum_probs=57.8

Q ss_pred             ccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----------C--CCCCCEEEEeCCCH
Q psy1304          49 ESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----------N--LIDIPIIIADLKNE  116 (184)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----------~--~~~v~~v~vDv~D~  116 (184)
                      +.++|-|+.                ++.+|.+..    -+|.+..|+......          .  ...+++++.|+.| 
T Consensus        63 GatG~iG~~----------------lv~~L~~~G----~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d-  121 (378)
T PLN00016         63 GGHAFIGFY----------------LAKELVKAG----HEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD-  121 (378)
T ss_pred             CCceeEhHH----------------HHHHHHHCC----CEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH-
Confidence            778888877                677777654    334444454321100          0  1247888888877 


Q ss_pred             HHHHHHh--hcCcEEEeccccccccchHHHHHHHHcCC-CEeeCC
Q psy1304         117 SSILIMA--KKCRVILNCVGPYTWYGEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       117 ~sL~a~l--~~~dVVIN~aGPf~~~g~~VaeACieAGt-hYVDlt  158 (184)
                        +.+++  .++|+||+++|.....-.++++||.++|+ ++|-++
T Consensus       122 --~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~S  164 (378)
T PLN00016        122 --VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCS  164 (378)
T ss_pred             --HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEc
Confidence              44444  57999999998765555899999999999 466543

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.08  E-value=0.031  Score=47.31  Aligned_cols=77  Identities=16%  Similarity=0.204  Sum_probs=49.3

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .|.||+.-|.|-   +.|--..++..|++..    .++.+.+|+.....+       ...++.++.+|+.|++++.++++
T Consensus         3 ~~~~k~vlVTGa---s~gIG~ala~~La~~G----~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~   75 (275)
T PRK05876          3 GFPGRGAVITGG---ASGIGLATGTEFARRG----ARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLAD   75 (275)
T ss_pred             CcCCCEEEEeCC---CchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            377777777662   1221112555555543    567778776432110       11346788999999999998887


Q ss_pred             c-------CcEEEecccc
Q psy1304         125 K-------CRVILNCVGP  135 (184)
Q Consensus       125 ~-------~dVVIN~aGP  135 (184)
                      .       .|+|||++|.
T Consensus        76 ~~~~~~g~id~li~nAg~   93 (275)
T PRK05876         76 EAFRLLGHVDVVFSNAGI   93 (275)
T ss_pred             HHHHHcCCCCEEEECCCc
Confidence            5       5999999984

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=94.98  E-value=0.1  Score=43.79  Aligned_cols=81  Identities=11%  Similarity=0.010  Sum_probs=50.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc-cCCCCCCEEEEeCCCHHHHHHHhh----cCcEEEecccccccc---------
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR-ENLIDIPIIIADLKNESSILIMAK----KCRVILNCVGPYTWY---------  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~-~~~~~v~~v~vDv~D~~sL~a~l~----~~dVVIN~aGPf~~~---------  139 (184)
                      ++.+|.+....   .+.+.+|++.... .... ...+..|++|++.++.+.+    ++|+||||||+....         
T Consensus        14 l~~~L~~~g~~---~v~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~   89 (314)
T TIGR02197        14 LVKALNERGIT---DILVVDNLRDGHKFLNLA-DLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMME   89 (314)
T ss_pred             HHHHHHHcCCc---eEEEEecCCCchhhhhhh-heeeeccCcchhHHHHHHhhccCCCCEEEECccccCccccchHHHHH
Confidence            66777765431   2434444332211 0011 1346678888888888775    799999999864221         


Q ss_pred             -----chHHHHHHHHcCCCEeeCC
Q psy1304         140 -----GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       140 -----g~~VaeACieAGthYVDlt  158 (184)
                           ...++++|.+.+++.|-++
T Consensus        90 ~n~~~~~~ll~~~~~~~~~~v~~S  113 (314)
T TIGR02197        90 NNYQYSKRLLDWCAEKGIPFIYAS  113 (314)
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEc
Confidence                 1568999999998876544

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.91  E-value=0.017  Score=46.81  Aligned_cols=59  Identities=10%  Similarity=-0.012  Sum_probs=40.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC------CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN------LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~------~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  -++.+.+|+.+...+.      ..++.++++|+.|++++.++++       +.|+||||+|..
T Consensus        21 la~~l~~~--G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~   92 (252)
T PRK06138         21 TAKLFARE--G--ARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFG   92 (252)
T ss_pred             HHHHHHHC--C--CeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            44445543  3  5677777765322110      1346789999999999998876       579999999964

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.061  Score=44.12  Aligned_cols=75  Identities=15%  Similarity=0.158  Sum_probs=49.9

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh-------
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK-------  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~-------  124 (184)
                      .++||++-|.|-   .++---.++.+|++.  +  .++.+.+|+....  ...++.++++|+.|+++++++++       
T Consensus         6 ~~~~k~vlItGa---s~gIG~~ia~~l~~~--G--~~v~~~~r~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          6 ELAGKRALVTGG---TKGIGAATVARLLEA--G--ARVVTTARSRPDD--LPEGVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             CCCCCEEEEECC---CCchhHHHHHHHHHC--C--CEEEEEeCChhhh--cCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            467787777762   122112255555544  3  6777887765432  22457899999999998887765       


Q ss_pred             cCcEEEecccc
Q psy1304         125 KCRVILNCVGP  135 (184)
Q Consensus       125 ~~dVVIN~aGP  135 (184)
                      +.|+|||++|.
T Consensus        77 ~id~vi~~ag~   87 (260)
T PRK06523         77 GVDILVHVLGG   87 (260)
T ss_pred             CCCEEEECCcc
Confidence            46999999994

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=94.87  E-value=0.055  Score=46.71  Aligned_cols=59  Identities=14%  Similarity=0.216  Sum_probs=44.4

Q ss_pred             HHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCC----ChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITG----EPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltG----E~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++.++|+|+.|++|...  ..+++.|+++|.|.+.++-    +.++.    .++.+.|++.|+.+.
T Consensus        55 ~~ell~~~DvVvi~a~~~~~--~~~~~~al~~Gk~Vvv~s~gAl~d~~~~----~~L~~aA~~~g~~l~  117 (265)
T PRK13304         55 IDELVEDVDLVVECASVNAV--EEVVPKSLENGKDVIIMSVGALADKELF----LKLYKLAKENNCKIY  117 (265)
T ss_pred             HHHHhcCCCEEEEcCChHHH--HHHHHHHHHcCCCEEEEchHHhcCHHHH----HHHHHHHHHcCCEEE
Confidence            55566899999999977554  5888999999999888653    33332    467788999997654

>PRK05867 short chain dehydrogenase; Provisional

Probab=94.80  E-value=0.028  Score=46.14  Aligned_cols=78  Identities=10%  Similarity=0.121  Sum_probs=49.6

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      ++||+.-|.|-   ++|--.-++..|++.  +  .++.+.+|+.+..+.       ...++.++.+|+.|++++.++++ 
T Consensus         7 ~~~k~vlVtGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (253)
T PRK05867          7 LHGKRALITGA---STGIGKRVALAYVEA--G--AQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQ   79 (253)
T ss_pred             CCCCEEEEECC---CchHHHHHHHHHHHC--C--CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            56777766661   122111244444444  3  578888876432110       11356788999999999998876 


Q ss_pred             ------cCcEEEecccccc
Q psy1304         125 ------KCRVILNCVGPYT  137 (184)
Q Consensus       125 ------~~dVVIN~aGPf~  137 (184)
                            +.|++||++|.+.
T Consensus        80 ~~~~~g~id~lv~~ag~~~   98 (253)
T PRK05867         80 VTAELGGIDIAVCNAGIIT   98 (253)
T ss_pred             HHHHhCCCCEEEECCCCCC
Confidence                  6899999999653

>PRK07024 short chain dehydrogenase; Provisional

Probab=94.80  E-value=0.023  Score=46.95  Aligned_cols=59  Identities=17%  Similarity=0.235  Sum_probs=42.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---C---CCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---N---LIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~---~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+.+...+   .   ..++.++++|+.|++++.+++++       .|++||++|..
T Consensus        18 la~~l~~~--G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~   89 (257)
T PRK07024         18 LAREYARQ--G--ATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGIS   89 (257)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence            66677665  3  567788876532110   0   12678999999999999888765       69999999964

>PRK08264 short chain dehydrogenase; Validated

Probab=94.72  E-value=0.06  Score=43.47  Aligned_cols=59  Identities=8%  Similarity=0.000  Sum_probs=42.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc---CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK---CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~---~dVVIN~aGP  135 (184)
                      ++.+|++....   ++.+.+|+.....+...++.++.+|+.|++++.+++++   .|+|||++|.
T Consensus        22 la~~l~~~G~~---~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   83 (238)
T PRK08264         22 FVEQLLARGAA---KVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGI   83 (238)
T ss_pred             HHHHHHHCCcc---cEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            66666655421   56667676543321224688999999999999998885   7999999998

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.72  E-value=0.016  Score=46.83  Aligned_cols=59  Identities=12%  Similarity=0.070  Sum_probs=41.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC------CCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN------LIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~------~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.......      ..++.++++|+.|++++.+++++       .|+|||++|..
T Consensus        21 l~~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   92 (251)
T PRK07231         21 IARRFAAE--G--ARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTT   92 (251)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            55556544  3  5677778865322111      12366999999999999998875       59999999863

>PRK05866 short chain dehydrogenase; Provisional

Probab=94.66  E-value=0.041  Score=47.21  Aligned_cols=79  Identities=13%  Similarity=0.153  Sum_probs=50.9

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ..++||++-|.|-   ++|---.++..|++.  +  .+|.+.+|+.+...+       ...++.++.+|+.|++++.+++
T Consensus        36 ~~~~~k~vlItGa---sggIG~~la~~La~~--G--~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~  108 (293)
T PRK05866         36 VDLTGKRILLTGA---SSGIGEAAAEQFARR--G--ATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALV  108 (293)
T ss_pred             cCCCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            3467777777661   122111134444443  4  678888887543211       1134668999999999999998


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|+||||+|..
T Consensus       109 ~~~~~~~g~id~li~~AG~~  128 (293)
T PRK05866        109 ADVEKRIGGVDILINNAGRS  128 (293)
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            8       689999999854

>PRK05854 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.027  Score=48.75  Aligned_cols=78  Identities=14%  Similarity=0.129  Sum_probs=50.9

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC---------CCCCCEEEEeCCCHHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN---------LIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~---------~~~v~~v~vDv~D~~sL~a~  122 (184)
                      .++||+.-|.|-   .+|----++.+|++.  +  .+|.+++|+.+...+.         ..++.++.+|+.|.++++++
T Consensus        11 ~l~gk~~lITGa---s~GIG~~~a~~La~~--G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~   83 (313)
T PRK05854         11 DLSGKRAVVTGA---SDGLGLGLARRLAAA--G--AEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAAL   83 (313)
T ss_pred             ccCCCEEEEeCC---CChHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHH
Confidence            357777777662   122111144444443  3  6888888875432211         13577899999999999988


Q ss_pred             hhc-------CcEEEeccccc
Q psy1304         123 AKK-------CRVILNCVGPY  136 (184)
Q Consensus       123 l~~-------~dVVIN~aGPf  136 (184)
                      ++.       .|++||++|.+
T Consensus        84 ~~~~~~~~~~iD~li~nAG~~  104 (313)
T PRK05854         84 GEQLRAEGRPIHLLINNAGVM  104 (313)
T ss_pred             HHHHHHhCCCccEEEECCccc
Confidence            764       79999999954

>PRK06196 oxidoreductase; Provisional

Probab=94.63  E-value=0.035  Score=47.69  Aligned_cols=79  Identities=19%  Similarity=0.264  Sum_probs=50.8

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---CCCCCCEEEEeCCCHHHHHHHhh---
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---NLIDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      ..++||+.-|.|-   .+|---.++.+|++.  +  .++.+.+|+.+...+   ....+.++.+|+.|.++++++++   
T Consensus        22 ~~l~~k~vlITGa---sggIG~~~a~~L~~~--G--~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~   94 (315)
T PRK06196         22 HDLSGKTAIVTGG---YSGLGLETTRALAQA--G--AHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFL   94 (315)
T ss_pred             CCCCCCEEEEeCC---CchHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHH
Confidence            3467777777661   122111144444443  3  577788887643321   12347899999999999988875   


Q ss_pred             ----cCcEEEeccccc
Q psy1304         125 ----KCRVILNCVGPY  136 (184)
Q Consensus       125 ----~~dVVIN~aGPf  136 (184)
                          +.|+|||++|.+
T Consensus        95 ~~~~~iD~li~nAg~~  110 (315)
T PRK06196         95 DSGRRIDILINNAGVM  110 (315)
T ss_pred             hcCCCCCEEEECCCCC
Confidence                479999999954

>PRK07478 short chain dehydrogenase; Provisional

Probab=94.57  E-value=0.039  Score=45.22  Aligned_cols=77  Identities=10%  Similarity=0.145  Sum_probs=48.4

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      ++||+.-|.|-   ++|--.-++.+|++..    .++.+.+|+......       ...++.++.+|+.|+++++++++ 
T Consensus         4 ~~~k~~lItGa---s~giG~~ia~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (254)
T PRK07478          4 LNGKVAIITGA---SSGIGRAAAKLFAREG----AKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVAL   76 (254)
T ss_pred             CCCCEEEEeCC---CChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            45666666551   1221112445555433    578888876532110       11356788999999999998887 


Q ss_pred             ------cCcEEEeccccc
Q psy1304         125 ------KCRVILNCVGPY  136 (184)
Q Consensus       125 ------~~dVVIN~aGPf  136 (184)
                            +.|++||++|..
T Consensus        77 ~~~~~~~id~li~~ag~~   94 (254)
T PRK07478         77 AVERFGGLDIAFNNAGTL   94 (254)
T ss_pred             HHHhcCCCCEEEECCCCC
Confidence                  579999999853

>KOG1502|consensus

Probab=94.55  E-value=0.053  Score=49.35  Aligned_cols=48  Identities=23%  Similarity=0.364  Sum_probs=43.2

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccc---------------hHHHHHHHHcC
Q psy1304         104 IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYG---------------EAVVKACIEAK  151 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g---------------~~VaeACieAG  151 (184)
                      .++..+..|+.|+.++..++++||.|+++|-|+....               .+|++||.++.
T Consensus        57 ~~l~l~~aDL~d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~  119 (327)
T KOG1502|consen   57 ERLKLFKADLLDEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK  119 (327)
T ss_pred             ccceEEeccccccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC
Confidence            4588999999999999999999999999999986533               58999999999

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.54  E-value=0.032  Score=45.53  Aligned_cols=59  Identities=12%  Similarity=-0.008  Sum_probs=40.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++..    .+|.+.+|++....+       ...++.++++|+.|++++.+++++       .|+||||+|..
T Consensus        23 la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   95 (262)
T PRK13394         23 IALELARAG----AAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQ   95 (262)
T ss_pred             HHHHHHHCC----CeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence            556666554    456677776532110       113467899999999999988775       79999999964

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=94.51  E-value=0.064  Score=44.26  Aligned_cols=73  Identities=8%  Similarity=0.037  Sum_probs=47.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc-----
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK-----  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~-----  125 (184)
                      +.||+.-|-|   -.+|    |-.++++..  .+  .++.+.+++....  ...++.++++|+.|+++++++++.     
T Consensus         7 l~~k~vlItG---~s~g----IG~~la~~l~~~G--~~v~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          7 LQGKIIIVTG---GSSG----IGLAIVKELLANG--ANVVNADIHGGDG--QHENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             CCCCEEEEeC---CCCh----HHHHHHHHHHHCC--CEEEEEeCCcccc--ccCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5566666655   1112    444444221  23  6777877765432  224677899999999999988774     


Q ss_pred             --CcEEEeccccc
Q psy1304         126 --CRVILNCVGPY  136 (184)
Q Consensus       126 --~dVVIN~aGPf  136 (184)
                        .|+||||+|..
T Consensus        76 g~id~li~~Ag~~   88 (266)
T PRK06171         76 GRIDGLVNNAGIN   88 (266)
T ss_pred             CCCCEEEECCccc
Confidence              69999999953

>PRK08265 short chain dehydrogenase; Provisional

Probab=94.48  E-value=0.036  Score=46.08  Aligned_cols=77  Identities=12%  Similarity=0.094  Sum_probs=49.0

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhhc---
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAKK---  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~~---  125 (184)
                      ++||+.-|.|-   .++---.++.+|++.  +  .++.+.+|+.+....    ...++.++++|+.|++++.++++.   
T Consensus         4 ~~~k~vlItGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          4 LAGKVAIVTGG---ATLIGAAVARALVAA--G--ARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCEEEEECC---CChHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHH
Confidence            45666666551   112111255556554  3  578888887542111    114577899999999999888874   


Q ss_pred             ----CcEEEeccccc
Q psy1304         126 ----CRVILNCVGPY  136 (184)
Q Consensus       126 ----~dVVIN~aGPf  136 (184)
                          .|++||++|.+
T Consensus        77 ~~g~id~lv~~ag~~   91 (261)
T PRK08265         77 RFGRVDILVNLACTY   91 (261)
T ss_pred             HhCCCCEEEECCCCC
Confidence                69999999964

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=94.47  E-value=0.056  Score=46.52  Aligned_cols=59  Identities=12%  Similarity=-0.025  Sum_probs=42.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++..    .+|.+.+|+.+...+       ...++.++.+|+.|.+++.++++.       .|+|||++|.+
T Consensus        22 ~a~~L~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~   94 (322)
T PRK07453         22 AAKALAKRG----WHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVY   94 (322)
T ss_pred             HHHHHHHCC----CEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccc
Confidence            555666543    567777876543211       113577899999999999998875       89999999954

>PRK08309 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.12  Score=42.38  Aligned_cols=83  Identities=11%  Similarity=0.184  Sum_probs=60.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPYTWYG  140 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf~~~g  140 (184)
                      ++..|++..    .++.+.+|+.+....      ...++.++.+|++|++++.+++++       .|++++.+=..  ..
T Consensus        15 la~~L~~~G----~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~~--~~   88 (177)
T PRK08309         15 VSLWLCEKG----FHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIHSS--AK   88 (177)
T ss_pred             HHHHHHHCc----CEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEecccc--ch
Confidence            566777654    456666776432111      124577888999999999988874       56888887322  34


Q ss_pred             hHHHHHHHHcCCC-----EeeCCCChH
Q psy1304         141 EAVVKACIEAKTH-----HVDITGEPY  162 (184)
Q Consensus       141 ~~VaeACieAGth-----YVDltGE~~  162 (184)
                      ..++++|.+.|++     ++++.|...
T Consensus        89 ~~~~~~~~~~gv~~~~~~~~h~~gs~~  115 (177)
T PRK08309         89 DALSVVCRELDGSSETYRLFHVLGSAA  115 (177)
T ss_pred             hhHHHHHHHHccCCCCceEEEEeCCcC
Confidence            7999999999999     999999866

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.45  E-value=0.031  Score=45.80  Aligned_cols=59  Identities=19%  Similarity=0.197  Sum_probs=40.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC--CCCCCEEEEeCCCHHHHHHHhh----cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN--LIDIPIIIADLKNESSILIMAK----KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~--~~~v~~v~vDv~D~~sL~a~l~----~~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+.+.....  ..+..++++|+.|+++++++++    ..|++||++||.
T Consensus        16 ia~~l~~~--g--~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~   80 (223)
T PRK05884         16 IAEGFRND--G--HKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS   80 (223)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence            44444443  3  5777777765432111  1246789999999999998886    479999999864

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=94.42  E-value=0.093  Score=50.50  Aligned_cols=55  Identities=20%  Similarity=0.237  Sum_probs=41.8

Q ss_pred             CCCCEEEEeCCCHHH-HHHHhhcCcEEEeccccccc----------------cchHHHHHHHHcCCCEeeCC
Q psy1304         104 IDIPIIIADLKNESS-ILIMAKKCRVILNCVGPYTW----------------YGEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       104 ~~v~~v~vDv~D~~s-L~a~l~~~dVVIN~aGPf~~----------------~g~~VaeACieAGthYVDlt  158 (184)
                      .+++++..|+.|..+ +.++++++|+|||||+-...                ....+++||.++|.++|-++
T Consensus       360 ~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~S  431 (660)
T PRK08125        360 PRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPS  431 (660)
T ss_pred             CceEEEeccccCcHHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEc
Confidence            357889999998665 67888999999999973210                01578999999998877544

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=94.35  E-value=0.064  Score=45.78  Aligned_cols=47  Identities=19%  Similarity=0.394  Sum_probs=37.7

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhcCcEEEecccccccc----------------chHHHHHHHHc
Q psy1304         104 IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWY----------------GEAVVKACIEA  150 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~----------------g~~VaeACieA  150 (184)
                      .+++++++|+.|++++.++++++|+||||||+....                ...++++|.+.
T Consensus        56 ~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~  118 (325)
T PLN02989         56 ERLKLFKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKV  118 (325)
T ss_pred             CceEEEeCCCCCchHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHc
Confidence            357788999999999999999999999999974211                04677888875

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=94.35  E-value=0.034  Score=48.04  Aligned_cols=50  Identities=18%  Similarity=0.300  Sum_probs=33.8

Q ss_pred             EEeCCCHHHHHHHhhc--CcEEEecccccccc----------------chHHHHHHHHcCCCEeeCCC
Q psy1304         110 IADLKNESSILIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDITG  159 (184)
Q Consensus       110 ~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDltG  159 (184)
                      .+|+.|.+++.++++.  .|+||||+|--...                -..++++|.+.|+++|.++-
T Consensus        34 ~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~ST  101 (286)
T PF04321_consen   34 DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHIST  101 (286)
T ss_dssp             CS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEE
T ss_pred             hcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeec
Confidence            6789999999999886  89999999632100                15889999999999888763

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08267 short chain dehydrogenase; Provisional

Probab=94.30  E-value=0.047  Score=44.93  Aligned_cols=59  Identities=12%  Similarity=0.022  Sum_probs=42.0

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---C--CCCCCEEEEeCCCHHHHHHHhhc--------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---N--LIDIPIIIADLKNESSILIMAKK--------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~--~~~v~~v~vDv~D~~sL~a~l~~--------~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.....+   .  ..++.++++|+.|.+++.+++++        .|+||||+|..
T Consensus        17 la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~   88 (260)
T PRK08267         17 TALLFAAEG----WRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGIL   88 (260)
T ss_pred             HHHHHHHCC----CeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCC
Confidence            666776643    567777776542211   1  14688999999999999988764        49999999964

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.21  E-value=0.055  Score=45.09  Aligned_cols=81  Identities=11%  Similarity=0.022  Sum_probs=49.4

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ..++||+.-|.|--+ |+|----++..|++.  +  .++.+.+|+++..+      .......++++|+.|+++++++++
T Consensus         6 ~~~~~k~~lItGas~-g~GIG~a~a~~la~~--G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   80 (258)
T PRK07533          6 LPLAGKRGLVVGIAN-EQSIAWGCARAFRAL--G--AELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFA   80 (258)
T ss_pred             cccCCCEEEEECCCC-CCcHHHHHHHHHHHc--C--CEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHH
Confidence            346788887777221 012001144444443  3  67888887643110      111334578999999999988765


Q ss_pred             c-------CcEEEeccccc
Q psy1304         125 K-------CRVILNCVGPY  136 (184)
Q Consensus       125 ~-------~dVVIN~aGPf  136 (184)
                      .       .|++||++|.+
T Consensus        81 ~~~~~~g~ld~lv~nAg~~   99 (258)
T PRK07533         81 RIAEEWGRLDFLLHSIAFA   99 (258)
T ss_pred             HHHHHcCCCCEEEEcCccC
Confidence            3       69999999854

>PRK12320 hypothetical protein; Provisional

Probab=94.17  E-value=0.12  Score=51.16  Aligned_cols=90  Identities=11%  Similarity=0.027  Sum_probs=61.5

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|+.                ++.+|.+..    .+|....++....  ...++++++.|+.|+. +.+++.++
T Consensus         5 VTGAaGFIGs~----------------La~~Ll~~G----~~Vi~ldr~~~~~--~~~~ve~v~~Dl~d~~-l~~al~~~   61 (699)
T PRK12320          5 VTDATGAVGRS----------------VTRQLIAAG----HTVSGIAQHPHDA--LDPRVDYVCASLRNPV-LQELAGEA   61 (699)
T ss_pred             EECCCCHHHHH----------------HHHHHHhCC----CEEEEEeCChhhc--ccCCceEEEccCCCHH-HHHHhcCC
Confidence            46677888877                566666543    2343333433221  1246889999999984 88889999


Q ss_pred             cEEEecccccccc--------chHHHHHHHHcCCCEeeCCC
Q psy1304         127 RVILNCVGPYTWY--------GEAVVKACIEAKTHHVDITG  159 (184)
Q Consensus       127 dVVIN~aGPf~~~--------g~~VaeACieAGthYVDltG  159 (184)
                      |+||||+++....        ..+++++|.++|+..|-+++
T Consensus        62 D~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS  102 (699)
T PRK12320         62 DAVIHLAPVDTSAPGGVGITGLAHVANAAARAGARLLFVSQ  102 (699)
T ss_pred             CEEEEcCccCccchhhHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence            9999999854211        25789999999998776553

>PRK12367 short chain dehydrogenase; Provisional

Probab=94.16  E-value=0.096  Score=44.15  Aligned_cols=50  Identities=12%  Similarity=-0.081  Sum_probs=35.3

Q ss_pred             eeEEeeeecc-cccc-cCCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccc
Q psy1304          87 TRLGLLGARD-CLYR-ENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPY  136 (184)
Q Consensus        87 ~~iaLAGrr~-~lg~-~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf  136 (184)
                      .++.+.+|+. .... .......++.+|+.|.+++.+.+.+.|++||++|..
T Consensus        39 ~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~   90 (245)
T PRK12367         39 AKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN   90 (245)
T ss_pred             CEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence            5666666654 1111 011123578999999999999999999999999853

>PRK06172 short chain dehydrogenase; Provisional

Probab=94.10  E-value=0.038  Score=45.17  Aligned_cols=77  Identities=12%  Similarity=0.113  Sum_probs=49.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      ++||+.-|.|-   .++---.++.+|++.  +  .++.+.+|+.+...       ....++.++.+|+.|++++.+++++
T Consensus         5 l~~k~ilItGa---s~~iG~~ia~~l~~~--G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   77 (253)
T PRK06172          5 FSGKVALVTGG---AAGIGRATALAFARE--G--AKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQ   77 (253)
T ss_pred             CCCCEEEEeCC---CchHHHHHHHHHHHc--C--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            56777776661   122111244555544  3  56778877653211       0114578899999999999998875


Q ss_pred             C-------cEEEeccccc
Q psy1304         126 C-------RVILNCVGPY  136 (184)
Q Consensus       126 ~-------dVVIN~aGPf  136 (184)
                      +       |++||++|..
T Consensus        78 ~~~~~g~id~li~~ag~~   95 (253)
T PRK06172         78 TIAAYGRLDYAFNNAGIE   95 (253)
T ss_pred             HHHHhCCCCEEEECCCCC
Confidence            4       9999999854

>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway

Probab=94.08  E-value=0.15  Score=38.09  Aligned_cols=62  Identities=15%  Similarity=0.140  Sum_probs=42.0

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      +++++.  +.|+||.|.++  ......++.+++.|+|.|=.+=..-.-.....++.+.|++.|+.+
T Consensus        51 ~~~~~~~~~~dvvVE~t~~--~~~~~~~~~~L~~G~~VVt~nk~ala~~~~~~~L~~~A~~~g~~~  114 (117)
T PF03447_consen   51 LEELIDDPDIDVVVECTSS--EAVAEYYEKALERGKHVVTANKGALADEALYEELREAARKNGVRI  114 (117)
T ss_dssp             HHHHHTHTT-SEEEE-SSC--HHHHHHHHHHHHTTCEEEES-HHHHHSHHHHHHHHHHHHHHT-EE
T ss_pred             HHHHhcCcCCCEEEECCCc--hHHHHHHHHHHHCCCeEEEECHHHhhhHHHHHHHHHHHHHcCCEE
Confidence            456666  89999999764  444678899999999998765433221133468899999999876

Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=94.08  E-value=0.12  Score=44.47  Aligned_cols=51  Identities=22%  Similarity=0.195  Sum_probs=40.1

Q ss_pred             EEEeCCCHHHHHHHhh--cCcEEEecccccccc----------------chHHHHHHHHcCCCEeeCCC
Q psy1304         109 IIADLKNESSILIMAK--KCRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDITG  159 (184)
Q Consensus       109 v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDltG  159 (184)
                      +..|+.|++++.++++  ++|+|||||+.....                -..++++|.+.|+.+|-++.
T Consensus        36 ~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss  104 (299)
T PRK09987         36 YCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYST  104 (299)
T ss_pred             ccCCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcc
Confidence            4569999999999998  489999999865321                14689999999988776553

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=94.08  E-value=0.14  Score=49.99  Aligned_cols=109  Identities=17%  Similarity=0.231  Sum_probs=78.6

Q ss_pred             hhhhccccccccCccccceeeecccccCCCCC-CCchhhhhhhCCCCCceeEEeeeeccc--------cccc-CCCCCCE
Q psy1304          39 RKQRKEDRIGESQPFRGQTLSVQDKIRPGRGS-NPRPSAYKADAPTSNLTRLGLLGARDC--------LYRE-NLIDIPI  108 (184)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~La~~~~~~~~~iaLAGrr~~--------lg~~-~~~~v~~  108 (184)
                      |+.=+-|.=.-+.-|+||++-|.|    |-|| -.++...+++..|.   +|-+-++.+-        +... ...+..+
T Consensus       234 R~pV~~d~~~i~~~~~gK~vLVTG----agGSiGsel~~qil~~~p~---~i~l~~~~E~~~~~i~~el~~~~~~~~~~~  306 (588)
T COG1086         234 RPPVALDTELIGAMLTGKTVLVTG----GGGSIGSELCRQILKFNPK---EIILFSRDEYKLYLIDMELREKFPELKLRF  306 (588)
T ss_pred             CCCCCCCHHHHHhHcCCCEEEEeC----CCCcHHHHHHHHHHhcCCC---EEEEecCchHHHHHHHHHHHhhCCCcceEE
Confidence            444444544556779999999998    4444 34455666666665   7888887651        2110 1356779


Q ss_pred             EEEeCCCHHHHHHHhhc--CcEEEeccc----cccccc------------hHHHHHHHHcCCCE
Q psy1304         109 IIADLKNESSILIMAKK--CRVILNCVG----PYTWYG------------EAVVKACIEAKTHH  154 (184)
Q Consensus       109 v~vDv~D~~sL~a~l~~--~dVVIN~aG----Pf~~~g------------~~VaeACieAGthY  154 (184)
                      ..+|+.|.+.+..++++  +|+|.|+|-    |..+++            .++++||+++|+..
T Consensus       307 ~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~  370 (588)
T COG1086         307 YIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKK  370 (588)
T ss_pred             EecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCE
Confidence            99999999999999999  999999985    222332            79999999999994

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.05  E-value=0.12  Score=43.09  Aligned_cols=77  Identities=17%  Similarity=0.162  Sum_probs=46.7

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeeccccc------c---cCCCCCCEEEEeCCCHHHHHH
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDCLY------R---ENLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~lg------~---~~~~~v~~v~vDv~D~~sL~a  121 (184)
                      ++||+.-|.|-     +++..|-.++|+..  .+  .++.+..++++.+      .   +......++++|+.|++++++
T Consensus         4 l~~k~~lItGa-----s~~~GIG~aia~~la~~G--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~   76 (258)
T PRK07370          4 LTGKKALVTGI-----ANNRSIAWGIAQQLHAAG--AELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEE   76 (258)
T ss_pred             cCCcEEEEeCC-----CCCCchHHHHHHHHHHCC--CEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHH
Confidence            46777777661     11233555555322  33  5677665432211      0   011345688999999999998


Q ss_pred             Hhhc-------CcEEEeccccc
Q psy1304         122 MAKK-------CRVILNCVGPY  136 (184)
Q Consensus       122 ~l~~-------~dVVIN~aGPf  136 (184)
                      +++.       .|++||++|..
T Consensus        77 ~~~~~~~~~g~iD~lv~nag~~   98 (258)
T PRK07370         77 TFETIKQKWGKLDILVHCLAFA   98 (258)
T ss_pred             HHHHHHHHcCCCCEEEEccccc
Confidence            8763       69999999843

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.05  E-value=0.23  Score=41.22  Aligned_cols=76  Identities=11%  Similarity=0.034  Sum_probs=48.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CCCCCCEEEEeCCC-HHHHHHHh-hcCcEEEecccccccc---------
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NLIDIPIIIADLKN-ESSILIMA-KKCRVILNCVGPYTWY---------  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D-~~sL~a~l-~~~dVVIN~aGPf~~~---------  139 (184)
                      ++.+|+...    -+|....|+......   ...+++++++|+.| .+++...+ .++|+||+++|+-...         
T Consensus        33 l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~~~~~~~~~~~n  108 (251)
T PLN00141         33 IVEQLLAKG----FAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRRSFDPFAPWKVD  108 (251)
T ss_pred             HHHHHHhCC----CEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCCcCCCCCCceeee
Confidence            556666532    344444454332111   11358899999988 57787888 6899999998853210         


Q ss_pred             ---chHHHHHHHHcCCC
Q psy1304         140 ---GEAVVKACIEAKTH  153 (184)
Q Consensus       140 ---g~~VaeACieAGth  153 (184)
                         ...++++|.+.|+.
T Consensus       109 ~~~~~~ll~a~~~~~~~  125 (251)
T PLN00141        109 NFGTVNLVEACRKAGVT  125 (251)
T ss_pred             hHHHHHHHHHHHHcCCC
Confidence               26788999988854

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.04  E-value=0.087  Score=43.32  Aligned_cols=77  Identities=16%  Similarity=0.180  Sum_probs=45.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC--CCCCEEEEeCCCHHHHHHHhh------
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL--IDIPIIIADLKNESSILIMAK------  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~--~~v~~v~vDv~D~~sL~a~l~------  124 (184)
                      ++||+.-|.|-   .++----++.+|++..    .++.+..++........  .++.++.+|+.|++++.++++      
T Consensus         5 l~~k~~lItGa---s~gIG~~~a~~l~~~G----~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          5 FKGKVALITGG---TRGIGRAIAEAFLREG----AKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             cCCCEEEEeCC---CChHHHHHHHHHHHCC----CEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            45666655552   1110011455555543    45666655432111011  247789999999999999887      


Q ss_pred             -cCcEEEeccccc
Q psy1304         125 -KCRVILNCVGPY  136 (184)
Q Consensus       125 -~~dVVIN~aGPf  136 (184)
                       +.|+||||+|..
T Consensus        78 ~~id~li~~ag~~   90 (255)
T PRK06463         78 GRVDVLVNNAGIM   90 (255)
T ss_pred             CCCCEEEECCCcC
Confidence             469999999864

>PRK08643 acetoin reductase; Validated

Probab=94.00  E-value=0.062  Score=44.00  Aligned_cols=59  Identities=8%  Similarity=0.115  Sum_probs=41.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+......       ...++.++++|+.|++++.++++       +.|+||||+|.+
T Consensus        18 la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   90 (256)
T PRK08643         18 IAKRLVEDG----FKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVA   90 (256)
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            666776553    567777775432110       11356789999999999988887       469999999864

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.99  E-value=0.051  Score=44.06  Aligned_cols=60  Identities=15%  Similarity=0.203  Sum_probs=41.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      ++.+|++  .+  .++.+.+|+.....+       ...++.++.+|+.|++++.++++       +.|+|||++|+..
T Consensus        23 l~~~L~~--~G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~   96 (239)
T PRK07666         23 VAIALAK--EG--VNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISK   96 (239)
T ss_pred             HHHHHHH--CC--CEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCcccc
Confidence            4444443  34  577788776432110       11357789999999999999887       6899999998753

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=93.97  E-value=0.097  Score=50.94  Aligned_cols=107  Identities=10%  Similarity=0.039  Sum_probs=67.2

Q ss_pred             ceEEEEecceeeeeeechhhhhccccccccCccccceeeecccccCCCCCCCchhhhhhhC--CCCCceeEEeeeecccc
Q psy1304          21 GEYLIFSKGTVTAKVLSSRKQRKEDRIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADA--PTSNLTRLGLLGARDCL   98 (184)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~--~~~~~~~iaLAGrr~~l   98 (184)
                      |.|..++..-.-.+=--+.+|.|-.+.....+|+||+.-|-|-       +.-|-.++++.  -.+  .++.+..|+...
T Consensus       380 ~~~~~~~~~~~f~~eyw~~e~~kl~~~~~~~~l~gkvvLVTGa-------sggIG~aiA~~La~~G--a~Vvi~~r~~~~  450 (676)
T TIGR02632       380 SEYVSLPEQEAFDIEYWPLEEAKLRRMPKEKTLARRVAFVTGG-------AGGIGRETARRLAAEG--AHVVLADLNLEA  450 (676)
T ss_pred             cceecCchhhccchhhhhhhHHhhccCCCCcCCCCCEEEEeCC-------CcHHHHHHHHHHHhCC--CEEEEEeCCHHH
Confidence            4454444444433333356777776665556788999888772       12244454421  124  678787776432


Q ss_pred             ccc---------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          99 YRE---------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        99 g~~---------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ...         ....+..+++|+.|++++.++++       +.|+|||++|..
T Consensus       451 ~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~  504 (676)
T TIGR02632       451 AEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIA  504 (676)
T ss_pred             HHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCC
Confidence            110         01245688999999999999887       579999999964

>PRK07890 short chain dehydrogenase; Provisional

Probab=93.95  E-value=0.061  Score=43.86  Aligned_cols=59  Identities=12%  Similarity=-0.001  Sum_probs=41.0

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+......       ...++.++.+|+.|+++++++++       +.|+|||++|+.
T Consensus        21 la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~   93 (258)
T PRK07890         21 LAVRAARAG----ADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRV   93 (258)
T ss_pred             HHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccC
Confidence            555565443    567777776532111       11357889999999999988875       469999999864

>PRK07063 short chain dehydrogenase; Provisional

Probab=93.95  E-value=0.082  Score=43.47  Aligned_cols=77  Identities=16%  Similarity=0.154  Sum_probs=48.3

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ++||+.-|.|-   .+|--.-++.+|++..    .++.+.+|+.+...+         ...++.++++|+.|++++.+++
T Consensus         5 l~~k~vlVtGa---s~gIG~~~a~~l~~~G----~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (260)
T PRK07063          5 LAGKVALVTGA---AQGIGAAIARAFAREG----AAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAV   77 (260)
T ss_pred             cCCCEEEEECC---CchHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHH
Confidence            45666666551   1121111455555443    567777775432111         1134678999999999999888


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|++||++|..
T Consensus        78 ~~~~~~~g~id~li~~ag~~   97 (260)
T PRK07063         78 AAAEEAFGPLDVLVNNAGIN   97 (260)
T ss_pred             HHHHHHhCCCcEEEECCCcC
Confidence            7       589999999964

>PRK07201 short chain dehydrogenase; Provisional

Probab=93.95  E-value=0.1  Score=49.07  Aligned_cols=88  Identities=16%  Similarity=0.189  Sum_probs=58.0

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc-----c--CCCCCCEEEEeCCC----
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR-----E--NLIDIPIIIADLKN----  115 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~-----~--~~~~v~~v~vDv~D----  115 (184)
                      |-+.++|-|..                ++.+|.....+  -+|....|+.....     .  ...+++++..|+.|    
T Consensus         5 VTGatGfIG~~----------------lv~~Ll~~~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~   66 (657)
T PRK07201          5 VTGGTGFIGRR----------------LVSRLLDRRRE--ATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLG   66 (657)
T ss_pred             EeCCccHHHHH----------------HHHHHHhcCCC--CEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCC
Confidence            35667787776                66777643445  56666656432110     0  11467889999988    


Q ss_pred             --HHHHHHHhhcCcEEEecccccccc-------------chHHHHHHHHcCCC
Q psy1304         116 --ESSILIMAKKCRVILNCVGPYTWY-------------GEAVVKACIEAKTH  153 (184)
Q Consensus       116 --~~sL~a~l~~~dVVIN~aGPf~~~-------------g~~VaeACieAGth  153 (184)
                        .+.+.++ +++|+||||+|.+...             ...++++|.+.|+.
T Consensus        67 ~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~  118 (657)
T PRK07201         67 LSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAA  118 (657)
T ss_pred             cCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCC
Confidence              3567776 9999999999975321             15788999998754

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=93.91  E-value=0.072  Score=44.01  Aligned_cols=59  Identities=8%  Similarity=0.027  Sum_probs=41.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---C-CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---N-LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~-~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .+|.+.+|+.+....   . ..++.++++|+.|+++++++++       ..|++||++|++
T Consensus        22 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~   91 (263)
T PRK06200         22 LVERFLAE--G--ARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIW   91 (263)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCc
Confidence            55555554  3  567777876532211   1 1357789999999999988876       469999999964

>PRK06949 short chain dehydrogenase; Provisional

Probab=93.87  E-value=0.098  Score=42.64  Aligned_cols=79  Identities=16%  Similarity=0.123  Sum_probs=51.8

Q ss_pred             ccCccccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHH
Q psy1304          49 ESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSI  119 (184)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL  119 (184)
                      .+..+.||++-|-|       ....|..++++..  .+  .++.+.+|+.+....       ...++.++.+|+.|++++
T Consensus         3 ~~~~~~~k~ilItG-------asg~IG~~~a~~l~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~   73 (258)
T PRK06949          3 RSINLEGKVALVTG-------ASSGLGARFAQVLAQAG--AKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSI   73 (258)
T ss_pred             cccCCCCCEEEEEC-------CCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            34567788877766       1123445555322  23  577777776532110       113577899999999999


Q ss_pred             HHHhh-------cCcEEEeccccc
Q psy1304         120 LIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       120 ~a~l~-------~~dVVIN~aGPf  136 (184)
                      .++++       +.|++||++|..
T Consensus        74 ~~~~~~~~~~~~~~d~li~~ag~~   97 (258)
T PRK06949         74 KAAVAHAETEAGTIDILVNNSGVS   97 (258)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCC
Confidence            99887       479999999953

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=93.87  E-value=0.08  Score=47.57  Aligned_cols=92  Identities=10%  Similarity=0.090  Sum_probs=57.1

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEE-eeeeccccccc---CCCCCCE---EEEeCCCHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLG-LLGARDCLYRE---NLIDIPI---IIADLKNESSI  119 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~ia-LAGrr~~lg~~---~~~~v~~---v~vDv~D~~sL  119 (184)
                      |.+.+++.|+.                .+..|++. |+  .++. +...++..+..   ..+.+..   ..++-.|.   
T Consensus         5 IiGATG~vG~e----------------llr~L~~h-P~--~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~---   62 (346)
T TIGR01850         5 IVGASGYTGGE----------------LLRLLLNH-PE--VEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDE---   62 (346)
T ss_pred             EECCCCHHHHH----------------HHHHHHcC-CC--ceEEEEeccchhcCCChHHhCccccccCCceeecCCH---
Confidence            56778888887                77888755 66  6655 53333322221   1122221   11222233   


Q ss_pred             HHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChH
Q psy1304         120 LIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPY  162 (184)
Q Consensus       120 ~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~  162 (184)
                      +++++++|+|+-|++ . .....++..++++|++.||++++..
T Consensus        63 ~~~~~~~DvVf~alP-~-~~s~~~~~~~~~~G~~VIDlS~~fR  103 (346)
T TIGR01850        63 EEIAEDADVVFLALP-H-GVSAELAPELLAAGVKVIDLSADFR  103 (346)
T ss_pred             HHhhcCCCEEEECCC-c-hHHHHHHHHHHhCCCEEEeCChhhh
Confidence            345568999999984 4 3457888889999999999998654

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK06197 short chain dehydrogenase; Provisional

Probab=93.75  E-value=0.075  Score=45.28  Aligned_cols=77  Identities=17%  Similarity=0.110  Sum_probs=47.4

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ++||+.-|.|-   .+|----++..|++.  +  .++.+.+|+.+...+         ....+.++++|+.|.+++.+++
T Consensus        14 ~~~k~vlItGa---s~gIG~~~a~~l~~~--G--~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~   86 (306)
T PRK06197         14 QSGRVAVVTGA---NTGLGYETAAALAAK--G--AHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAA   86 (306)
T ss_pred             CCCCEEEEcCC---CCcHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHH
Confidence            45666666551   122001144444444  3  577788876432211         0135678899999999999887


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|+|||++|..
T Consensus        87 ~~~~~~~~~iD~li~nAg~~  106 (306)
T PRK06197         87 DALRAAYPRIDLLINNAGVM  106 (306)
T ss_pred             HHHHhhCCCCCEEEECCccc
Confidence            6       479999999853

>PRK06057 short chain dehydrogenase; Provisional

Probab=93.70  E-value=0.073  Score=43.77  Aligned_cols=77  Identities=8%  Similarity=0.045  Sum_probs=46.5

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC--CCCCEEEEeCCCHHHHHHHhhc-----
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL--IDIPIIIADLKNESSILIMAKK-----  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~--~~v~~v~vDv~D~~sL~a~l~~-----  125 (184)
                      ++||++-|.|-       +.-|..++++..-..-.++.+.+|+........  -...++++|+.|+++++++++.     
T Consensus         5 ~~~~~vlItGa-------sggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          5 LAGRVAVITGG-------GSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             CCCCEEEEECC-------CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            56666666551       112444444222111156777777654221111  1236899999999999988874     


Q ss_pred             --CcEEEeccccc
Q psy1304         126 --CRVILNCVGPY  136 (184)
Q Consensus       126 --~dVVIN~aGPf  136 (184)
                        .|+|||++|..
T Consensus        78 ~~id~vi~~ag~~   90 (255)
T PRK06057         78 GSVDIAFNNAGIS   90 (255)
T ss_pred             CCCCEEEECCCcC
Confidence              69999999854

>PRK06482 short chain dehydrogenase; Provisional

Probab=93.70  E-value=0.1  Score=43.42  Aligned_cols=59  Identities=8%  Similarity=0.025  Sum_probs=41.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc----ccCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY----RENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg----~~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++..    -++.+..|+.+..    .....++.++.+|+.|.+++.+++++       .|+||||+|..
T Consensus        18 la~~L~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   87 (276)
T PRK06482         18 MTERLLARG----DRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYG   87 (276)
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            667777653    4566666654211    11124678999999999999988763       79999999864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=93.69  E-value=0.055  Score=44.31  Aligned_cols=75  Identities=16%  Similarity=0.123  Sum_probs=49.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      +.||++-|.|       ....|..++++..  .+  .++.+.+|+.+...+       ...++.++.+|+.|++++.+++
T Consensus         9 ~~~k~ilItG-------as~~IG~~la~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (256)
T PRK06124          9 LAGQVALVTG-------SARGLGFEIARALAGAG--AHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAF   79 (256)
T ss_pred             CCCCEEEEEC-------CCchHHHHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            6677777765       2223555555322  24  688888887532111       1135789999999999998887


Q ss_pred             hc-------CcEEEeccccc
Q psy1304         124 KK-------CRVILNCVGPY  136 (184)
Q Consensus       124 ~~-------~dVVIN~aGPf  136 (184)
                      ++       .|+|||++|..
T Consensus        80 ~~~~~~~~~id~vi~~ag~~   99 (256)
T PRK06124         80 ARIDAEHGRLDILVNNVGAR   99 (256)
T ss_pred             HHHHHhcCCCCEEEECCCCC
Confidence            74       48999999953

>PRK05717 oxidoreductase; Validated

Probab=93.68  E-value=0.058  Score=44.35  Aligned_cols=80  Identities=11%  Similarity=0.013  Sum_probs=48.4

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      ...|+||+.-|.|-   .++--.-++.+|++.  +  .++.+.++++....+    ....+.++.+|+.|++++.++++.
T Consensus         5 ~~~~~~k~vlItG~---sg~IG~~~a~~l~~~--g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   77 (255)
T PRK05717          5 NPGHNGRVALVTGA---ARGIGLGIAAWLIAE--G--WQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAE   77 (255)
T ss_pred             CcccCCCEEEEeCC---cchHHHHHHHHHHHc--C--CEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHH
Confidence            34567777666662   111001144555544  3  567777765432211    113577899999999998776553


Q ss_pred             -------CcEEEeccccc
Q psy1304         126 -------CRVILNCVGPY  136 (184)
Q Consensus       126 -------~dVVIN~aGPf  136 (184)
                             .|+|||++|..
T Consensus        78 ~~~~~g~id~li~~ag~~   95 (255)
T PRK05717         78 VLGQFGRLDALVCNAAIA   95 (255)
T ss_pred             HHHHhCCCCEEEECCCcc
Confidence                   69999999854

>PRK08177 short chain dehydrogenase; Provisional

Probab=93.68  E-value=0.14  Score=41.42  Aligned_cols=59  Identities=8%  Similarity=0.003  Sum_probs=42.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc--cCCCCCCEEEEeCCCHHHHHHHhh-----cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR--ENLIDIPIIIADLKNESSILIMAK-----KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~--~~~~~v~~v~vDv~D~~sL~a~l~-----~~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .+|.+.+|+.....  ....++.+..+|+.|+++++++++     +.|+|||++|.+
T Consensus        17 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~   82 (225)
T PRK08177         17 LVDRLLER--G--WQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGIS   82 (225)
T ss_pred             HHHHHHhC--C--CEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCccc
Confidence            66777765  3  56777777653221  122467889999999999988887     479999999865

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=93.67  E-value=0.14  Score=41.65  Aligned_cols=57  Identities=9%  Similarity=0.125  Sum_probs=41.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+...  ....++.++++|+.|++++.+++++       .|+||||+|..
T Consensus        24 la~~l~~~--G--~~v~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   87 (252)
T PRK08220         24 VALAFVEA--G--AKVIGFDQAFLT--QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGIL   87 (252)
T ss_pred             HHHHHHHC--C--CEEEEEecchhh--hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            45555543  3  567777776511  1224578899999999999998875       69999999965

>PRK08862 short chain dehydrogenase; Provisional

Probab=93.65  E-value=0.087  Score=43.64  Aligned_cols=76  Identities=12%  Similarity=0.015  Sum_probs=48.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      ++||+.-|-|-   ++|-..-++..|++.  +  .++.+.+|++....+       ...++...++|+.|+++++++++ 
T Consensus         3 ~~~k~~lVtGa---s~GIG~aia~~la~~--G--~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (227)
T PRK08862          3 IKSSIILITSA---GSVLGRTISCHFARL--G--ATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDA   75 (227)
T ss_pred             CCCeEEEEECC---ccHHHHHHHHHHHHC--C--CEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHH
Confidence            56777777662   223111244444443  4  678888886642211       11346678899999999988764 


Q ss_pred             -------cCcEEEecccc
Q psy1304         125 -------KCRVILNCVGP  135 (184)
Q Consensus       125 -------~~dVVIN~aGP  135 (184)
                             +.|++||++|.
T Consensus        76 ~~~~~g~~iD~li~nag~   93 (227)
T PRK08862         76 IEQQFNRAPDVLVNNWTS   93 (227)
T ss_pred             HHHHhCCCCCEEEECCcc
Confidence                   57999999973

>PRK06180 short chain dehydrogenase; Provisional

Probab=93.65  E-value=0.088  Score=44.12  Aligned_cols=59  Identities=12%  Similarity=-0.043  Sum_probs=41.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc----cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR----ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~----~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...    ....++.++.+|+.|++++.++++       +.|+|||++|..
T Consensus        20 la~~l~~~--G--~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~   89 (277)
T PRK06180         20 LAQAALAA--G--HRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYG   89 (277)
T ss_pred             HHHHHHhC--c--CEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcc
Confidence            55566554  4  66777777653211    011457789999999999998887       479999999974

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=93.65  E-value=0.1  Score=43.21  Aligned_cols=77  Identities=8%  Similarity=0.001  Sum_probs=47.6

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeeccc-ccc--------cCCCCCCEEEEeCCCHHHH
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDC-LYR--------ENLIDIPIIIADLKNESSI  119 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~-lg~--------~~~~~v~~v~vDv~D~~sL  119 (184)
                      ..++||++-|-|       .+..|..++|+..  .+  .++.+.+|++. ...        ....++.++.+|+.|++++
T Consensus         4 ~~l~~k~vlItG-------as~gIG~~ia~~l~~~G--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   74 (260)
T PRK08416          4 NEMKGKTLVISG-------GTRGIGKAIVYEFAQSG--VNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETY   74 (260)
T ss_pred             cccCCCEEEEeC-------CCchHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            346777777765       2223555555221  23  56777665431 100        0113567899999999999


Q ss_pred             HHHhhc-------CcEEEeccccc
Q psy1304         120 LIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus       120 ~a~l~~-------~dVVIN~aGPf  136 (184)
                      +++++.       .|++||++|.+
T Consensus        75 ~~~~~~~~~~~g~id~lv~nAg~~   98 (260)
T PRK08416         75 KELFKKIDEDFDRVDFFISNAIIS   98 (260)
T ss_pred             HHHHHHHHHhcCCccEEEECcccc
Confidence            888774       69999999743

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=93.63  E-value=0.075  Score=43.62  Aligned_cols=59  Identities=10%  Similarity=0.029  Sum_probs=42.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+....    ...++.++.+|+.|+++++++++       ..|++|||+|..
T Consensus        22 ia~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~   91 (257)
T PRK07067         22 VAERYLAEG----ARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALF   91 (257)
T ss_pred             HHHHHHHcC----CEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            677777653    567777776542211    11357789999999999999887       479999999854

>PRK07454 short chain dehydrogenase; Provisional

Probab=93.60  E-value=0.058  Score=43.77  Aligned_cols=59  Identities=19%  Similarity=0.105  Sum_probs=41.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+......       ...++.++.+|+.|++++.++++.       .|+|||++|.+
T Consensus        22 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~   94 (241)
T PRK07454         22 TALAFAKA--G--WDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMA   94 (241)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcc
Confidence            56666653  3  567777776532110       114577899999999999888774       79999999965

>PRK09291 short chain dehydrogenase; Provisional

Probab=93.57  E-value=0.16  Score=41.45  Aligned_cols=59  Identities=14%  Similarity=-0.049  Sum_probs=40.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc-------ccCCCCCCEEEEeCCCHHHHHHHhh-cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY-------RENLIDIPIIIADLKNESSILIMAK-KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg-------~~~~~~v~~v~vDv~D~~sL~a~l~-~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+..|+....       .....++.++++|+.|++++.+++. +.|+||||+|+.
T Consensus        18 ia~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag~~   84 (257)
T PRK09291         18 VALRLARKG----HNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGIG   84 (257)
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECCCcC
Confidence            566666543    4455555543211       1112457899999999999999887 899999999854

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.57  E-value=0.075  Score=45.00  Aligned_cols=77  Identities=14%  Similarity=0.135  Sum_probs=48.1

Q ss_pred             ccccceeeeccccc---CCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHH
Q psy1304          52 PFRGQTLSVQDKIR---PGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        52 ~~~~~~~~~~~~~~---~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      .++||+.-|.|--+   -|+.    ++..|++.  +  .++.+.+|++....      ...+...++++|+.|+++++++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~a----iA~~la~~--G--a~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~   75 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWG----IAKQLAAQ--G--AELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAV   75 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHH----HHHHHHhC--C--CEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHH
Confidence            36778877777321   1222    44445443  3  67888877542110      0112234688999999999888


Q ss_pred             hh-------cCcEEEeccccc
Q psy1304         123 AK-------KCRVILNCVGPY  136 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf  136 (184)
                      ++       ..|++||++|..
T Consensus        76 ~~~~~~~~g~iD~lVnnAG~~   96 (271)
T PRK06505         76 FEALEKKWGKLDFVVHAIGFS   96 (271)
T ss_pred             HHHHHHHhCCCCEEEECCccC
Confidence            75       369999999943

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.56  E-value=0.11  Score=44.27  Aligned_cols=78  Identities=13%  Similarity=0.058  Sum_probs=47.3

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc---c---cCCCCCCEEEEeCCCHHHHHHHhhc-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY---R---ENLIDIPIIIADLKNESSILIMAKK-  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg---~---~~~~~v~~v~vDv~D~~sL~a~l~~-  125 (184)
                      ++||+.-|.|--. ++|    |-.++|+..-..-.++.+.+|+++..   .   .....-.++++|+.|+++++++++. 
T Consensus         3 l~~k~~lItGas~-~~G----IG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          3 MKGKKGLIVGVAN-NKS----IAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             cCCcEEEEECCCC-CCC----HHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHH
Confidence            4677777776210 123    55555532211116888888764210   0   0111115789999999999988754 


Q ss_pred             ------CcEEEecccc
Q psy1304         126 ------CRVILNCVGP  135 (184)
Q Consensus       126 ------~dVVIN~aGP  135 (184)
                            .|++||++|-
T Consensus        78 ~~~~g~iDilVnnAG~   93 (274)
T PRK08415         78 KKDLGKIDFIVHSVAF   93 (274)
T ss_pred             HHHcCCCCEEEECCcc
Confidence                  6999999994

>PRK09135 pteridine reductase; Provisional

Probab=93.53  E-value=0.099  Score=42.04  Aligned_cols=59  Identities=12%  Similarity=0.101  Sum_probs=39.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.....+         ......++.+|+.|.+++.++++.       .|+||||+|..
T Consensus        22 l~~~l~~~--g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   96 (249)
T PRK09135         22 IARTLHAA--G--YRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSF   96 (249)
T ss_pred             HHHHHHHC--C--CEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            56666654  3  566666665321100         013467899999999999998874       69999999953

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=93.49  E-value=0.31  Score=40.52  Aligned_cols=87  Identities=13%  Similarity=0.069  Sum_probs=60.7

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|.-                ++.+|.....+    +....|...........+.++..|+.|.+.+.+.++++
T Consensus         5 VtG~tGfiG~~----------------l~~~L~~~g~~----V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~   64 (314)
T COG0451           5 VTGGAGFIGSH----------------LVERLLAAGHD----VRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGV   64 (314)
T ss_pred             EEcCcccHHHH----------------HHHHHHhCCCe----EEEEeCCCccccccccccceeeecccchHHHHHHHhcC
Confidence            34557888866                67778766444    33333433322211146889999999999999999999


Q ss_pred             -cEEEeccccccccc-----------------hHHHHHHHHcCCC
Q psy1304         127 -RVILNCVGPYTWYG-----------------EAVVKACIEAKTH  153 (184)
Q Consensus       127 -dVVIN~aGPf~~~g-----------------~~VaeACieAGth  153 (184)
                       |+||++++......                 .+++++|.+.|+.
T Consensus        65 ~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~  109 (314)
T COG0451          65 PDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVK  109 (314)
T ss_pred             CCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence             99999999885322                 4678899887764

>PRK08251 short chain dehydrogenase; Provisional

Probab=93.49  E-value=0.089  Score=42.74  Aligned_cols=58  Identities=14%  Similarity=0.104  Sum_probs=40.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++.+|++..    .++.+.+|+.....+         ...++.++.+|+.|++++.++++       +.|+|||++|.
T Consensus        18 la~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~   91 (248)
T PRK08251         18 MAREFAAKG----RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGI   91 (248)
T ss_pred             HHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            556666553    467777776532110         11357789999999999988776       47999999983

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=93.48  E-value=0.36  Score=41.22  Aligned_cols=49  Identities=12%  Similarity=0.147  Sum_probs=38.2

Q ss_pred             CCCEEEEeCCCHHHHHHHhh--cCcEEEeccccccc----------------cchHHHHHHHHcCCC
Q psy1304         105 DIPIIIADLKNESSILIMAK--KCRVILNCVGPYTW----------------YGEAVVKACIEAKTH  153 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~----------------~g~~VaeACieAGth  153 (184)
                      ++.++.+|+.|++++.++++  ++|+|||++|....                .-..++++|.+.|+.
T Consensus        51 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  117 (338)
T PRK10675         51 HPTFVEGDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK  117 (338)
T ss_pred             CceEEEccCCCHHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            46788999999999999887  58999999974321                014778999998874

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=93.48  E-value=0.11  Score=45.39  Aligned_cols=70  Identities=11%  Similarity=0.050  Sum_probs=49.2

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~  120 (184)
                      |.+.++|=|..                ++.+|++..    .++.+..|+.....      ....+++++.+|+.|++++.
T Consensus        15 VtG~~GfIG~~----------------l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   74 (353)
T PLN02896         15 VTGATGYIGSW----------------LVKLLLQRG----YTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFD   74 (353)
T ss_pred             EECCCcHHHHH----------------HHHHHHHCC----CEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHH
Confidence            45667787777                777777654    34444445432211      01145778999999999999


Q ss_pred             HHhhcCcEEEeccccc
Q psy1304         121 IMAKKCRVILNCVGPY  136 (184)
Q Consensus       121 a~l~~~dVVIN~aGPf  136 (184)
                      ++++++|+|||++|+.
T Consensus        75 ~~~~~~d~Vih~A~~~   90 (353)
T PLN02896         75 EAVKGCDGVFHVAASM   90 (353)
T ss_pred             HHHcCCCEEEECCccc
Confidence            9999999999999864

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=93.47  E-value=0.24  Score=42.70  Aligned_cols=48  Identities=8%  Similarity=0.058  Sum_probs=37.6

Q ss_pred             ecccccccCCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccchH
Q psy1304          94 ARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEA  142 (184)
Q Consensus        94 rr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g~~  142 (184)
                      |+..+-. ..+.+.+++.|+.|++++...+.++|+||++.|+.+--...
T Consensus        32 Rn~~K~~-~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~   79 (211)
T COG2910          32 RNASKLA-ARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDNDE   79 (211)
T ss_pred             eChHhcc-ccccceeecccccChhhhHhhhcCCceEEEeccCCCCChhH
Confidence            4544432 22678899999999999999999999999999988544433

>PRK07825 short chain dehydrogenase; Provisional

Probab=93.47  E-value=0.069  Score=44.35  Aligned_cols=59  Identities=17%  Similarity=0.131  Sum_probs=40.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+   ....+.++.+|+.|++++++++++       .|++||++|..
T Consensus        21 la~~l~~~--G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~   89 (273)
T PRK07825         21 TARALAAL--G--ARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVM   89 (273)
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            45555543  3  567777776543221   113578999999999998777654       68999999854

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=93.46  E-value=0.12  Score=39.12  Aligned_cols=90  Identities=9%  Similarity=0.077  Sum_probs=56.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEe-eeecccccccCC---C---CCCEEEEeCCCHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGL-LGARDCLYRENL---I---DIPIIIADLKNESSI  119 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaL-AGrr~~lg~~~~---~---~v~~v~vDv~D~~sL  119 (184)
                      |.+.+++.|+.                +...|++ .|+  +.+.. .++++..|..-.   +   ...-..++-.|.+.+
T Consensus         4 IvGAtG~vG~~----------------l~~lL~~-hp~--~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (121)
T PF01118_consen    4 IVGATGYVGRE----------------LLRLLAE-HPD--FELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEEL   64 (121)
T ss_dssp             EESTTSHHHHH----------------HHHHHHH-TST--EEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHH
T ss_pred             EECCCCHHHHH----------------HHHHHhc-CCC--ccEEEeeeeccccCCeeehhccccccccceeEeecchhHh
Confidence            56778888888                6678888 556  55444 444442332111   1   122222222444433


Q ss_pred             HHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         120 LIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       120 ~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                          .++|+|+.|.+..  .....+...++.|+.-||++++.
T Consensus        65 ----~~~Dvvf~a~~~~--~~~~~~~~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   65 ----SDVDVVFLALPHG--ASKELAPKLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             ----TTESEEEE-SCHH--HHHHHHHHHHHTTSEEEESSSTT
T ss_pred             ----hcCCEEEecCchh--HHHHHHHHHhhCCcEEEeCCHHH
Confidence                8999999998633  23688888899999999999875

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK08339 short chain dehydrogenase; Provisional

Probab=93.46  E-value=0.11  Score=43.51  Aligned_cols=77  Identities=17%  Similarity=0.203  Sum_probs=49.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      |+||+.-|.|-   ++|---.++..|++.  +  .++.+.+|+.+....        ...++.++++|+.|+++++++++
T Consensus         6 l~~k~~lItGa---s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~   78 (263)
T PRK08339          6 LSGKLAFTTAS---SKGIGFGVARVLARA--G--ADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVK   78 (263)
T ss_pred             CCCCEEEEeCC---CCcHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            56777666551   122111244555544  3  578888876532110        11357789999999999999887


Q ss_pred             ------cCcEEEeccccc
Q psy1304         125 ------KCRVILNCVGPY  136 (184)
Q Consensus       125 ------~~dVVIN~aGPf  136 (184)
                            +.|++||++|..
T Consensus        79 ~~~~~g~iD~lv~nag~~   96 (263)
T PRK08339         79 ELKNIGEPDIFFFSTGGP   96 (263)
T ss_pred             HHHhhCCCcEEEECCCCC
Confidence                  379999999853

>PRK07062 short chain dehydrogenase; Provisional

Probab=93.45  E-value=0.071  Score=43.99  Aligned_cols=77  Identities=12%  Similarity=0.137  Sum_probs=47.4

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------C--CCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------N--LIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~--~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ++||+.-|.|-   ++|    |..++++..-..-.++.+.+|+.+....       .  ..++.++.+|+.|++++.+++
T Consensus         6 l~~k~~lItGa---s~g----iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   78 (265)
T PRK07062          6 LEGRVAVVTGG---SSG----IGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFA   78 (265)
T ss_pred             cCCCEEEEeCC---Cch----HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHH
Confidence            56777776661   222    4444443221111678888876532110       1  124568899999999998877


Q ss_pred             hc-------CcEEEeccccc
Q psy1304         124 KK-------CRVILNCVGPY  136 (184)
Q Consensus       124 ~~-------~dVVIN~aGPf  136 (184)
                      +.       .|++||++|..
T Consensus        79 ~~~~~~~g~id~li~~Ag~~   98 (265)
T PRK07062         79 AAVEARFGGVDMLVNNAGQG   98 (265)
T ss_pred             HHHHHhcCCCCEEEECCCCC
Confidence            63       69999999953

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=93.44  E-value=0.11  Score=46.48  Aligned_cols=40  Identities=10%  Similarity=0.133  Sum_probs=32.5

Q ss_pred             HhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHH
Q psy1304         122 MAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYF  163 (184)
Q Consensus       122 ~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~  163 (184)
                      ...++|+|+-|.+..  ....++.+|+++|+|-||++++..+
T Consensus        65 ~~~~vD~Vf~alP~~--~~~~~v~~a~~aG~~VID~S~~fR~  104 (343)
T PRK00436         65 ILAGADVVFLALPHG--VSMDLAPQLLEAGVKVIDLSADFRL  104 (343)
T ss_pred             HhcCCCEEEECCCcH--HHHHHHHHHHhCCCEEEECCcccCC
Confidence            457899999998543  3468888999999999999987654

>PRK05993 short chain dehydrogenase; Provisional

Probab=93.43  E-value=0.064  Score=45.06  Aligned_cols=59  Identities=8%  Similarity=-0.067  Sum_probs=40.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhc--------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKK--------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~--------~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+.+...+ ....+.++.+|+.|++++++++++        .|+|||++|..
T Consensus        20 la~~l~~~--G--~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~   87 (277)
T PRK05993         20 CARALQSD--G--WRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYG   87 (277)
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcC
Confidence            44555543  4  678888886543211 113578899999999998888763        59999999843

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.40  E-value=0.12  Score=43.08  Aligned_cols=79  Identities=18%  Similarity=0.201  Sum_probs=49.7

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhC--CCCCceeEEeeeecc--ccccc---CC-CCCCEEEEeCCCHHHHHHH
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADA--PTSNLTRLGLLGARD--CLYRE---NL-IDIPIIIADLKNESSILIM  122 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~--~~~~~~~iaLAGrr~--~lg~~---~~-~~v~~v~vDv~D~~sL~a~  122 (184)
                      +.|+||+.-|.|-- +++|    |..++|+.  ..+  .++.+.+|++  +....   .. .+..++++|+.|+++++++
T Consensus         3 ~~~~~k~~lItGa~-~s~G----IG~a~a~~la~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~   75 (256)
T PRK07889          3 GLLEGKRILVTGVI-TDSS----IAFHVARVAQEQG--AEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASL   75 (256)
T ss_pred             ccccCCEEEEeCCC-Ccch----HHHHHHHHHHHCC--CEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHH
Confidence            34778887777620 0123    54555532  123  6788887653  21110   11 3467899999999999888


Q ss_pred             hh-------cCcEEEeccccc
Q psy1304         123 AK-------KCRVILNCVGPY  136 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf  136 (184)
                      ++       +.|++||++|..
T Consensus        76 ~~~~~~~~g~iD~li~nAG~~   96 (256)
T PRK07889         76 ADRVREHVDGLDGVVHSIGFA   96 (256)
T ss_pred             HHHHHHHcCCCcEEEEccccc
Confidence            65       479999999854

>PRK12828 short chain dehydrogenase; Provisional

Probab=93.35  E-value=0.19  Score=40.06  Aligned_cols=59  Identities=17%  Similarity=0.214  Sum_probs=40.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc-----cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR-----ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~-----~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+.....     ......+++.+|+.|.+++.++++       +.|+|||++|.+
T Consensus        23 la~~l~~~--G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   93 (239)
T PRK12828         23 TAAWLAAR--G--ARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAF   93 (239)
T ss_pred             HHHHHHHC--C--CeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCccc
Confidence            55555544  4  56777777543211     011356788899999999998887       579999999854

>PRK08628 short chain dehydrogenase; Provisional

Probab=93.31  E-value=0.14  Score=41.99  Aligned_cols=76  Identities=12%  Similarity=0.076  Sum_probs=46.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      ++||++-|-|-   ..+---.++.+|++..    .++.+.+|++....      ....++.++.+|+.|++++.++++  
T Consensus         5 l~~~~ilItGa---sggiG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (258)
T PRK08628          5 LKDKVVIVTGG---ASGIGAAISLRLAEEG----AIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQT   77 (258)
T ss_pred             cCCCEEEEeCC---CChHHHHHHHHHHHcC----CcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            55666666551   1111111455555443    45566666553210      012457889999999999998887  


Q ss_pred             -----cCcEEEecccc
Q psy1304         125 -----KCRVILNCVGP  135 (184)
Q Consensus       125 -----~~dVVIN~aGP  135 (184)
                           +.|+|||++|-
T Consensus        78 ~~~~~~id~vi~~ag~   93 (258)
T PRK08628         78 VAKFGRIDGLVNNAGV   93 (258)
T ss_pred             HHhcCCCCEEEECCcc
Confidence                 47999999994

>PRK06194 hypothetical protein; Provisional

Probab=93.28  E-value=0.088  Score=43.92  Aligned_cols=59  Identities=12%  Similarity=0.120  Sum_probs=40.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+....       ...++.++.+|+.|++++++++++       .|+|||++|..
T Consensus        22 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~   94 (287)
T PRK06194         22 FARIGAAL--G--MKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVG   94 (287)
T ss_pred             HHHHHHHC--C--CEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55555544  3  567777775422110       113467799999999999999885       69999999864

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=93.27  E-value=0.25  Score=41.26  Aligned_cols=47  Identities=13%  Similarity=0.094  Sum_probs=36.4

Q ss_pred             EEeCCCHHHHHHHhhc--CcEEEeccccccc------c-----------chHHHHHHHHcCCC-Eee
Q psy1304         110 IADLKNESSILIMAKK--CRVILNCVGPYTW------Y-----------GEAVVKACIEAKTH-HVD  156 (184)
Q Consensus       110 ~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~------~-----------g~~VaeACieAGth-YVD  156 (184)
                      .+|+.|.+++.++++.  +|+|||||+++..      .           ...++++|.+.|+. +|=
T Consensus        32 ~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~   98 (306)
T PLN02725         32 ELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLF   98 (306)
T ss_pred             cCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEE
Confidence            4799999999999885  6999999986421      0           15699999999974 553

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=93.25  E-value=0.055  Score=44.40  Aligned_cols=77  Identities=13%  Similarity=0.138  Sum_probs=48.5

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.||++-|.|-   ..+--..++.+|++.  +  .+|.+.+|+......       ...++.++.+|+.|++++++++++
T Consensus         8 ~~~k~vlItGa---~g~iG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (255)
T PRK07523          8 LTGRRALVTGS---SQGIGYALAEGLAQA--G--AEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA   80 (255)
T ss_pred             CCCCEEEEECC---cchHHHHHHHHHHHc--C--CEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence            56676666651   111111145555543  4  677787776532111       113467889999999999999875


Q ss_pred             -------CcEEEeccccc
Q psy1304         126 -------CRVILNCVGPY  136 (184)
Q Consensus       126 -------~dVVIN~aGPf  136 (184)
                             .|+|||++|..
T Consensus        81 ~~~~~~~~d~li~~ag~~   98 (255)
T PRK07523         81 FEAEIGPIDILVNNAGMQ   98 (255)
T ss_pred             HHHhcCCCCEEEECCCCC
Confidence                   69999999864

>PRK05693 short chain dehydrogenase; Provisional

Probab=93.25  E-value=0.14  Score=42.60  Aligned_cols=58  Identities=10%  Similarity=0.059  Sum_probs=39.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++..|++.  +  .++.+.+|+...... ......++.+|+.|+++++++++       +.|+|||++|.
T Consensus        17 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~   82 (274)
T PRK05693         17 LADAFKAA--G--YEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGY   82 (274)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence            55666554  3  567777776532111 11346789999999999988875       46999999994

>PRK07577 short chain dehydrogenase; Provisional

Probab=93.22  E-value=0.26  Score=39.51  Aligned_cols=55  Identities=15%  Similarity=-0.001  Sum_probs=39.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+....    ...+++.+|+.|+++++++++      +.|+||||+|.+
T Consensus        19 ia~~l~~~G----~~v~~~~r~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   79 (234)
T PRK07577         19 LSLRLANLG----HQVIGIARSAIDD----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIA   79 (234)
T ss_pred             HHHHHHHCC----CEEEEEeCCcccc----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCC
Confidence            555555443    5677777765431    123688999999999988887      579999999965

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=93.21  E-value=0.091  Score=46.26  Aligned_cols=61  Identities=11%  Similarity=0.088  Sum_probs=44.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCC-----CCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENL-----IDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYTW  138 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~-----~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~~  138 (184)
                      ++..|+...    .++.|+|||.+.-++..     .....+.+|+.|+++++++++       +.|++||-||-+..
T Consensus        22 ~A~~l~~~G----~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g   94 (246)
T COG4221          22 TARALAEAG----AKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALG   94 (246)
T ss_pred             HHHHHHHCC----CeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcC
Confidence            444454444    79999999886322111     357799999999999877776       58999999996644

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=93.16  E-value=0.099  Score=48.35  Aligned_cols=79  Identities=9%  Similarity=0.104  Sum_probs=50.7

Q ss_pred             ccCccccceeeecccccCCCCCCCchhhhhhhC--CCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHH
Q psy1304          49 ESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADA--PTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~--~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      +.-.++||+.-|.|-   ..|    |-.++++.  ..+  .++.+.+|+.+....    ....+..+.+|+.|++++.+.
T Consensus       172 ta~sl~gK~VLITGA---SgG----IG~aLA~~La~~G--~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~  242 (406)
T PRK07424        172 TALSLKGKTVAVTGA---SGT----LGQALLKELHQQG--AKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAEL  242 (406)
T ss_pred             cccCCCCCEEEEeCC---CCH----HHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHH
Confidence            334567787777661   122    44555532  124  567666665432111    112356788999999999999


Q ss_pred             hhcCcEEEeccccc
Q psy1304         123 AKKCRVILNCVGPY  136 (184)
Q Consensus       123 l~~~dVVIN~aGPf  136 (184)
                      +.+.|++||++|..
T Consensus       243 l~~IDiLInnAGi~  256 (406)
T PRK07424        243 LEKVDILIINHGIN  256 (406)
T ss_pred             hCCCCEEEECCCcC
Confidence            99999999999854

>TIGR01746 Thioester-redct thioester reductase domain

Probab=93.16  E-value=0.22  Score=42.07  Aligned_cols=89  Identities=12%  Similarity=0.142  Sum_probs=58.1

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc----------------c-cCC-CCCCE
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY----------------R-ENL-IDIPI  108 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg----------------~-~~~-~~v~~  108 (184)
                      |.+.++|-|+.                ++..|.+..+.  .+|....|+....                . ... .++.+
T Consensus         4 vtGatG~lG~~----------------l~~~L~~~g~~--~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~   65 (367)
T TIGR01746         4 LTGATGFLGAY----------------LLEELLRRSTQ--AKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEV   65 (367)
T ss_pred             EeccchHHHHH----------------HHHHHHhCCCC--CEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEE
Confidence            35667777776                67777766544  4555555543210                0 000 46788


Q ss_pred             EEEeCCC------HHHHHHHhhcCcEEEecccccccc-------------chHHHHHHHHcCCC
Q psy1304         109 IIADLKN------ESSILIMAKKCRVILNCVGPYTWY-------------GEAVVKACIEAKTH  153 (184)
Q Consensus       109 v~vDv~D------~~sL~a~l~~~dVVIN~aGPf~~~-------------g~~VaeACieAGth  153 (184)
                      +..|+.+      .+.+..+.+++|+||||+|+....             ...++++|.+.++.
T Consensus        66 ~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~  129 (367)
T TIGR01746        66 VAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAK  129 (367)
T ss_pred             EeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCc
Confidence            8889864      457788889999999999864311             15678899888765

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=93.12  E-value=0.13  Score=42.20  Aligned_cols=58  Identities=19%  Similarity=0.138  Sum_probs=40.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++.+|++.  +  .++.+.+|+......    ...++.++.+|+.|++++.++++       +.|+|||++|.
T Consensus        16 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~   84 (248)
T PRK10538         16 ITRRFIQQ--G--HKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGL   84 (248)
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            55566554  3  567777776532110    11357889999999999988876       68999999985

>PRK06125 short chain dehydrogenase; Provisional

Probab=93.10  E-value=0.17  Score=41.66  Aligned_cols=77  Identities=14%  Similarity=0.228  Sum_probs=50.0

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ++||+.-|.|-   +++--.-++..|++.  +  .++.+.+|+.+....        ...++.++.+|+.|++++.++++
T Consensus         5 ~~~k~vlItG~---~~giG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (259)
T PRK06125          5 LAGKRVLITGA---SKGIGAAAAEAFAAE--G--CHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAA   77 (259)
T ss_pred             CCCCEEEEeCC---CchHHHHHHHHHHHc--C--CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            56777777662   233111255555554  4  678888876542211        12357789999999999988776


Q ss_pred             ---cCcEEEeccccc
Q psy1304         125 ---KCRVILNCVGPY  136 (184)
Q Consensus       125 ---~~dVVIN~aGPf  136 (184)
                         +.|++|||+|..
T Consensus        78 ~~g~id~lv~~ag~~   92 (259)
T PRK06125         78 EAGDIDILVNNAGAI   92 (259)
T ss_pred             HhCCCCEEEECCCCC
Confidence               489999999853

>PRK07814 short chain dehydrogenase; Provisional

Probab=93.08  E-value=0.14  Score=42.41  Aligned_cols=76  Identities=20%  Similarity=0.223  Sum_probs=47.3

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      ++||+.-|-|-   +++---.++.+|++.  +  .++.+.+|+.+...+       ...++.++.+|+.|++++.++++ 
T Consensus         8 ~~~~~vlItGa---sggIG~~~a~~l~~~--G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (263)
T PRK07814          8 LDDQVAVVTGA---GRGLGAAIALAFAEA--G--ADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQ   80 (263)
T ss_pred             CCCCEEEEECC---CChHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            56666666551   122001144445443  3  577777776532111       11356788999999999988776 


Q ss_pred             ------cCcEEEecccc
Q psy1304         125 ------KCRVILNCVGP  135 (184)
Q Consensus       125 ------~~dVVIN~aGP  135 (184)
                            +.|+|||++|.
T Consensus        81 ~~~~~~~id~vi~~Ag~   97 (263)
T PRK07814         81 AVEAFGRLDIVVNNVGG   97 (263)
T ss_pred             HHHHcCCCCEEEECCCC
Confidence                  57999999985

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=93.07  E-value=0.1  Score=43.19  Aligned_cols=75  Identities=15%  Similarity=0.138  Sum_probs=47.5

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhC--CCCCceeEEeeeeccccc-----ccCCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADA--PTSNLTRLGLLGARDCLY-----RENLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~--~~~~~~~iaLAGrr~~lg-----~~~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      +.||+.-|.|-   .+|    |-.++++.  -.+  .++.+.+|++...     .....++.++.+|+.|++++.++++.
T Consensus         6 l~~k~~lItGa---s~g----IG~aia~~l~~~G--~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12481          6 LNGKVAIITGC---NTG----LGQGMAIGLAKAG--ADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQ   76 (251)
T ss_pred             cCCCEEEEeCC---Cch----HHHHHHHHHHHCC--CEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHH
Confidence            55676666551   122    44444421  123  6777777754211     01114577899999999999998873


Q ss_pred             -------CcEEEeccccc
Q psy1304         126 -------CRVILNCVGPY  136 (184)
Q Consensus       126 -------~dVVIN~aGPf  136 (184)
                             .|++||++|.+
T Consensus        77 ~~~~~g~iD~lv~~ag~~   94 (251)
T PRK12481         77 AVEVMGHIDILINNAGII   94 (251)
T ss_pred             HHHHcCCCCEEEECCCcC
Confidence                   69999999964

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.05  E-value=0.067  Score=42.98  Aligned_cols=59  Identities=15%  Similarity=0.155  Sum_probs=40.0

Q ss_pred             hhhhhhhCCCCCceeEEee-eeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLL-GARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLA-Grr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+. +|+......       ...++.++.+|+.|++++.++++       +.|+||+++|+.
T Consensus        21 la~~l~~~--g--~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   94 (247)
T PRK05565         21 IAELLAKE--G--AKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS   94 (247)
T ss_pred             HHHHHHHC--C--CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcC
Confidence            44455543  3  566666 665432110       11347789999999999998887       689999999975

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=93.03  E-value=0.079  Score=46.83  Aligned_cols=66  Identities=20%  Similarity=0.233  Sum_probs=45.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC--------CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN--------LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYTW  138 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~--------~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~~  138 (184)
                      |-..+|+....+--.+.|-+|++++-.+.        ...+.++.+|+.|++++..+..       ..|++||+|| |..
T Consensus        18 IG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG-~g~   96 (265)
T COG0300          18 IGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAG-FGT   96 (265)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCC-cCC
Confidence            44555543333336788888987632211        1346799999999999998876       5899999998 544


Q ss_pred             cc
Q psy1304         139 YG  140 (184)
Q Consensus       139 ~g  140 (184)
                      ++
T Consensus        97 ~g   98 (265)
T COG0300          97 FG   98 (265)
T ss_pred             cc
Confidence            44

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=93.02  E-value=0.12  Score=42.70  Aligned_cols=77  Identities=12%  Similarity=0.096  Sum_probs=47.8

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .++||++-|-|--.   +--.-++.+|++..    .++.+.+|++.....        ...++.++.+|+.|++++.+++
T Consensus         4 ~~~~k~~lItGa~~---gIG~~ia~~l~~~G----~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~   76 (261)
T PRK08936          4 DLEGKVVVITGGST---GLGRAMAVRFGKEK----AKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLI   76 (261)
T ss_pred             CCCCCEEEEeCCCC---hHHHHHHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Confidence            46777777766211   10111445555443    567777774421100        1134668899999999999887


Q ss_pred             h-------cCcEEEecccc
Q psy1304         124 K-------KCRVILNCVGP  135 (184)
Q Consensus       124 ~-------~~dVVIN~aGP  135 (184)
                      +       ..|++||++|.
T Consensus        77 ~~~~~~~g~id~lv~~ag~   95 (261)
T PRK08936         77 QTAVKEFGTLDVMINNAGI   95 (261)
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            6       36999999995

>PRK06114 short chain dehydrogenase; Provisional

Probab=93.00  E-value=0.13  Score=42.28  Aligned_cols=77  Identities=19%  Similarity=0.152  Sum_probs=46.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ++||+.-|-|-   .+|---.++..|++.  +  .++.+.+|+.....        ....++.++.+|+.|++++.++++
T Consensus         6 ~~~k~~lVtG~---s~gIG~~ia~~l~~~--G--~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~   78 (254)
T PRK06114          6 LDGQVAFVTGA---GSGIGQRIAIGLAQA--G--ADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVA   78 (254)
T ss_pred             CCCCEEEEECC---CchHHHHHHHHHHHC--C--CEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            45666655551   122011144444443  3  56777777543110        011356789999999999998887


Q ss_pred             c-------CcEEEeccccc
Q psy1304         125 K-------CRVILNCVGPY  136 (184)
Q Consensus       125 ~-------~dVVIN~aGPf  136 (184)
                      .       .|+||||+|..
T Consensus        79 ~~~~~~g~id~li~~ag~~   97 (254)
T PRK06114         79 RTEAELGALTLAVNAAGIA   97 (254)
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence            5       49999999964

>PLN02686 cinnamoyl-CoA reductase

Probab=92.98  E-value=0.15  Score=45.44  Aligned_cols=48  Identities=21%  Similarity=0.326  Sum_probs=38.4

Q ss_pred             CCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccc----------------hHHHHHHHHc-CC
Q psy1304         105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYG----------------EAVVKACIEA-KT  152 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g----------------~~VaeACieA-Gt  152 (184)
                      ++.++..|+.|++++.++++++|.|++++++....+                .+++++|.+. |+
T Consensus       108 ~~~~v~~Dl~d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v  172 (367)
T PLN02686        108 GIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESV  172 (367)
T ss_pred             ceEEEEcCCCCHHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCc
Confidence            467889999999999999999999999998642211                4589999875 44

>PRK05650 short chain dehydrogenase; Provisional

Probab=92.96  E-value=0.18  Score=41.84  Aligned_cols=59  Identities=22%  Similarity=0.067  Sum_probs=41.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+.+...       ....++.++++|+.|++++.++++       +.|+|||++|+.
T Consensus        16 la~~l~~~--g--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~   88 (270)
T PRK05650         16 IALRWARE--G--WRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVA   88 (270)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55666654  3  56777777553211       012457789999999999988876       589999999965

>PRK08226 short chain dehydrogenase; Provisional

Probab=92.95  E-value=0.17  Score=41.61  Aligned_cols=58  Identities=17%  Similarity=0.198  Sum_probs=40.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGP  135 (184)
                      ++.+|++.  +  .++.+.+|+.....      ....++.++++|+.|+++++++++.       .|+|||++|.
T Consensus        22 la~~l~~~--G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~   92 (263)
T PRK08226         22 IARVFARH--G--ANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGV   92 (263)
T ss_pred             HHHHHHHC--C--CEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            56666654  3  67888887653211      0113467899999999999998774       6999999995

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=92.92  E-value=0.2  Score=43.26  Aligned_cols=45  Identities=4%  Similarity=0.021  Sum_probs=36.5

Q ss_pred             CCCEEEEeCCCHHHHHHHhhc--CcEEEecccccccc----------------chHHHHHHHH
Q psy1304         105 DIPIIIADLKNESSILIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIE  149 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACie  149 (184)
                      .++++.+|+.|++++.+++++  +|.||||+|+....                -..++++|.+
T Consensus        52 ~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~  114 (355)
T PRK10217         52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARA  114 (355)
T ss_pred             ceEEEECCCcChHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHH
Confidence            467889999999999999985  89999999975321                1568888876

>PRK06841 short chain dehydrogenase; Provisional

Probab=92.90  E-value=0.091  Score=42.86  Aligned_cols=77  Identities=13%  Similarity=0.120  Sum_probs=47.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhhc---
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAKK---  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~~---  125 (184)
                      .+||++-|.|       .+..|..++++..-..-.++.+.+|+......    ...+..++.+|+.|++++.+++++   
T Consensus        13 ~~~k~vlItG-------as~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   85 (255)
T PRK06841         13 LSGKVAVVTG-------GASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVIS   85 (255)
T ss_pred             CCCCEEEEEC-------CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4567766665       11235555553222111577777776542110    113456899999999999988864   


Q ss_pred             ----CcEEEeccccc
Q psy1304         126 ----CRVILNCVGPY  136 (184)
Q Consensus       126 ----~dVVIN~aGPf  136 (184)
                          .|+|||++|..
T Consensus        86 ~~~~~d~vi~~ag~~  100 (255)
T PRK06841         86 AFGRIDILVNSAGVA  100 (255)
T ss_pred             HhCCCCEEEECCCCC
Confidence                69999999864

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.90  E-value=0.14  Score=42.81  Aligned_cols=78  Identities=15%  Similarity=0.102  Sum_probs=48.0

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeeccccc---c---cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDCLY---R---ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~lg---~---~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ++||+.-|.|-     ++...|-.++|+..  .+  .++.+.+|++...   .   ...+....+++|+.|+++++++++
T Consensus         4 ~~~k~~lITGa-----~~~~GIG~a~a~~l~~~G--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   76 (261)
T PRK08690          4 LQGKKILITGM-----ISERSIAYGIAKACREQG--AELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFA   76 (261)
T ss_pred             cCCcEEEEECC-----CCCCcHHHHHHHHHHHCC--CEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHH
Confidence            57787777661     11122555555322  33  6777776543111   0   011334578999999999998875


Q ss_pred             -------cCcEEEecccccc
Q psy1304         125 -------KCRVILNCVGPYT  137 (184)
Q Consensus       125 -------~~dVVIN~aGPf~  137 (184)
                             +.|++||++|...
T Consensus        77 ~~~~~~g~iD~lVnnAG~~~   96 (261)
T PRK08690         77 DLGKHWDGLDGLVHSIGFAP   96 (261)
T ss_pred             HHHHHhCCCcEEEECCccCC
Confidence                   4799999999653

>PRK05875 short chain dehydrogenase; Provisional

Probab=92.90  E-value=0.13  Score=42.73  Aligned_cols=58  Identities=14%  Similarity=0.145  Sum_probs=39.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc------C---CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE------N---LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~------~---~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++.+|++..    .++.+.+|+.+....      .   ..++.++.+|+.|++++.++++       +.|+|||++|.
T Consensus        23 la~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~   96 (276)
T PRK05875         23 VAAGLVAAG----AAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGG   96 (276)
T ss_pred             HHHHHHHCC----CeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            555565543    567777765422110      0   1356788899999999998887       57999999984

>PLN02583 cinnamoyl-CoA reductase

Probab=92.87  E-value=0.43  Score=40.84  Aligned_cols=85  Identities=15%  Similarity=0.160  Sum_probs=57.3

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc-------cc-c-CCCCCCEEEEeCCCH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL-------YR-E-NLIDIPIIIADLKNE  116 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l-------g~-~-~~~~v~~v~vDv~D~  116 (184)
                      .|-+.++|-|+-                ++.+|.+..    -++.+..|+...       .. . ...+++++++|+.|+
T Consensus        10 lVTGatG~IG~~----------------lv~~Ll~~G----~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~   69 (297)
T PLN02583         10 CVMDASGYVGFW----------------LVKRLLSRG----YTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDY   69 (297)
T ss_pred             EEECCCCHHHHH----------------HHHHHHhCC----CEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCH
Confidence            445666777766                667777644    344444453110       10 0 113578899999999


Q ss_pred             HHHHHHhhcCcEEEecccccccc--------------chHHHHHHHHc
Q psy1304         117 SSILIMAKKCRVILNCVGPYTWY--------------GEAVVKACIEA  150 (184)
Q Consensus       117 ~sL~a~l~~~dVVIN~aGPf~~~--------------g~~VaeACieA  150 (184)
                      +++..++.+++.|+++++|....              -..++++|.+.
T Consensus        70 ~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~  117 (297)
T PLN02583         70 HSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQT  117 (297)
T ss_pred             HHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999988775421              16789999886

>PRK08263 short chain dehydrogenase; Provisional

Probab=92.85  E-value=0.093  Score=43.83  Aligned_cols=59  Identities=7%  Similarity=0.058  Sum_probs=40.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+....    ....+.++++|+.|++++.+++++       .|+||||+|..
T Consensus        19 ~a~~l~~~--g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   88 (275)
T PRK08263         19 WTEAALER--G--DRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYG   88 (275)
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCc
Confidence            45555543  3  567777776532210    124577889999999999888774       69999999965

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=92.82  E-value=0.14  Score=44.26  Aligned_cols=57  Identities=18%  Similarity=0.126  Sum_probs=42.6

Q ss_pred             HhhcCcEEEeccccccccchHHHHHHHHcCCCEee-CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         122 MAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVD-ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       122 ~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVD-ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +...+|+||.|..|-..  ...++.|+++|+|.|- .+|-   ..+...++.+.|+++|++++
T Consensus        65 l~~~~DvVIdfT~p~~~--~~~~~~al~~g~~vVigttg~---~~e~~~~l~~aA~~~g~~v~  122 (266)
T TIGR00036        65 VETDPDVLIDFTTPEGV--LNHLKFALEHGVRLVVGTTGF---SEEDKQELADLAEKAGIAAV  122 (266)
T ss_pred             hcCCCCEEEECCChHHH--HHHHHHHHHCCCCEEEECCCC---CHHHHHHHHHHHhcCCccEE
Confidence            34679999999977543  5899999999999774 5553   33333678888999887765

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=92.82  E-value=0.11  Score=42.93  Aligned_cols=59  Identities=8%  Similarity=0.040  Sum_probs=40.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---C-CCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---N-LIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~-~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+.+...+   . ..++.++.+|+.|.+++.++++.       .|++||++|.+
T Consensus        21 ia~~l~~~--G--~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~   90 (262)
T TIGR03325        21 IVDRFVAE--G--ARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIW   90 (262)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            55555554  3  677777876532111   1 13577899999999998887764       69999999864

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.81  E-value=0.1  Score=44.12  Aligned_cols=78  Identities=14%  Similarity=0.079  Sum_probs=47.3

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhhc-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAKK-  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~~-  125 (184)
                      ++||+.-|.|--+ |||----++..|++..    .++.+.+|++.+..      ...+...++.+|+.|+++++++++. 
T Consensus         4 l~~k~~lITGas~-~~GIG~aia~~la~~G----~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (262)
T PRK07984          4 LSGKRILVTGVAS-KLSIAYGIAQAMHREG----AELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAEL   78 (262)
T ss_pred             cCCCEEEEeCCCC-CccHHHHHHHHHHHCC----CEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHH
Confidence            5678777766211 1220011444454443    56777777532110      1123456788999999999988853 


Q ss_pred             ------CcEEEecccc
Q psy1304         126 ------CRVILNCVGP  135 (184)
Q Consensus       126 ------~dVVIN~aGP  135 (184)
                            .|++||++|-
T Consensus        79 ~~~~g~iD~linnAg~   94 (262)
T PRK07984         79 GKVWPKFDGFVHSIGF   94 (262)
T ss_pred             HhhcCCCCEEEECCcc
Confidence                  6999999984

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=92.79  E-value=0.12  Score=41.53  Aligned_cols=60  Identities=5%  Similarity=-0.012  Sum_probs=41.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      ++.+|++..    .+|.+.+|+.....       ....++.++.+|+.|++++.++++       .+|+|||++|.+.
T Consensus        22 l~~~l~~~g----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~   95 (251)
T PRK12826         22 IAVRLAADG----AEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFP   95 (251)
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            556666543    45666667632111       011347889999999999999886       5899999998764

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=92.78  E-value=0.37  Score=41.93  Aligned_cols=60  Identities=10%  Similarity=0.073  Sum_probs=43.9

Q ss_pred             HHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++++|+|+-|+++...  ..+++.|+++|.|.+..+  ..-..+. .++.+.|+++|+.+.
T Consensus        61 ~eell~~~D~Vvi~tp~~~h--~e~~~~aL~aGk~Vi~~s--~gal~~~-~~L~~~A~~~g~~l~  120 (271)
T PRK13302         61 LDQLATHADIVVEAAPASVL--RAIVEPVLAAGKKAIVLS--VGALLRN-EDLIDLARQNGGQII  120 (271)
T ss_pred             HHHHhcCCCEEEECCCcHHH--HHHHHHHHHcCCcEEEec--chhHHhH-HHHHHHHHHcCCEEE
Confidence            45567889999999976543  688899999999977653  2212233 578889999998763

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.78  E-value=0.18  Score=42.14  Aligned_cols=77  Identities=14%  Similarity=0.124  Sum_probs=47.3

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeeccccc---c---cC--CCCCCEEEEeCCCHHHHHHH
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDCLY---R---EN--LIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~lg---~---~~--~~~v~~v~vDv~D~~sL~a~  122 (184)
                      ++||+.-|.|--     ++..|-.++|+..  .+  .++.+.+|+....   +   ..  ..++.++++|+.|+++++++
T Consensus         5 ~~~k~~lItGa~-----~s~GIG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   77 (257)
T PRK08594          5 LEGKTYVVMGVA-----NKRSIAWGIARSLHNAG--AKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITAC   77 (257)
T ss_pred             cCCCEEEEECCC-----CCCCHHHHHHHHHHHCC--CEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHH
Confidence            678887777621     0122445555321  23  6777877642110   0   01  13567889999999999888


Q ss_pred             hh-------cCcEEEeccccc
Q psy1304         123 AK-------KCRVILNCVGPY  136 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf  136 (184)
                      ++       ..|++|||+|-+
T Consensus        78 ~~~~~~~~g~ld~lv~nag~~   98 (257)
T PRK08594         78 FETIKEEVGVIHGVAHCIAFA   98 (257)
T ss_pred             HHHHHHhCCCccEEEECcccC
Confidence            75       369999999843

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=92.72  E-value=0.14  Score=42.13  Aligned_cols=79  Identities=15%  Similarity=0.138  Sum_probs=49.0

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ..++||+.-|.|-   +.+--.-++.+|++.  +  .++.+.+|++....      ....++.++++|+.|++++.++++
T Consensus        11 ~~l~~k~vlItGa---s~gIG~~ia~~l~~~--G--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   83 (258)
T PRK06935         11 FSLDGKVAIVTGG---NTGLGQGYAVALAKA--G--ADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVK   83 (258)
T ss_pred             ccCCCCEEEEeCC---CchHHHHHHHHHHHC--C--CEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            3456666666651   122111155555544  3  56777776532110      011457789999999999999988


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             ..|++||++|..
T Consensus        84 ~~~~~~g~id~li~~ag~~  102 (258)
T PRK06935         84 EALEEFGKIDILVNNAGTI  102 (258)
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence                   569999999864

>PRK05872 short chain dehydrogenase; Provisional

Probab=92.72  E-value=0.095  Score=44.75  Aligned_cols=78  Identities=14%  Similarity=0.209  Sum_probs=47.8

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      .++||+.-|.|-   .+|----++.+|++.  +  .++.+.+|+.+....      ....+..+.+|+.|+++++++++ 
T Consensus         6 ~l~gk~vlItGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~   78 (296)
T PRK05872          6 SLAGKVVVVTGA---ARGIGAELARRLHAR--G--AKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEE   78 (296)
T ss_pred             CCCCCEEEEECC---CchHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHH
Confidence            467777777661   122011144444443  4  678888886532110      01234456699999999988875 


Q ss_pred             ------cCcEEEeccccc
Q psy1304         125 ------KCRVILNCVGPY  136 (184)
Q Consensus       125 ------~~dVVIN~aGPf  136 (184)
                            ..|+|||++|..
T Consensus        79 ~~~~~g~id~vI~nAG~~   96 (296)
T PRK05872         79 AVERFGGIDVVVANAGIA   96 (296)
T ss_pred             HHHHcCCCCEEEECCCcC
Confidence                  469999999964

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.69  E-value=0.099  Score=42.41  Aligned_cols=59  Identities=12%  Similarity=-0.062  Sum_probs=39.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGP  135 (184)
                      ++.+|++....  +- .+..|+.....+       ...++.++.+|+.|++++.+++++       .|+|||++|+
T Consensus        20 ~a~~l~~~g~~--v~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~   92 (250)
T PRK08063         20 IALRLAEEGYD--IA-VNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAAS   92 (250)
T ss_pred             HHHHHHHCCCE--EE-EEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            67777765433  22 233454432111       114577899999999999988874       6999999985

>PRK06181 short chain dehydrogenase; Provisional

Probab=92.67  E-value=0.2  Score=41.16  Aligned_cols=60  Identities=12%  Similarity=0.112  Sum_probs=40.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      ++.+|++.  +  .++.+.+|+.....       ....++.++.+|+.|++++.++++       +.|+||||+|+..
T Consensus        17 la~~l~~~--g--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~   90 (263)
T PRK06181         17 LAVRLARA--G--AQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITM   90 (263)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccc
Confidence            44555533  3  46667766543211       012357788999999999998887       5799999999754

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=92.67  E-value=0.14  Score=42.18  Aligned_cols=54  Identities=19%  Similarity=0.025  Sum_probs=39.4

Q ss_pred             hhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc----CcEEEeccccc
Q psy1304          75 SAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK----CRVILNCVGPY  136 (184)
Q Consensus        75 ~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~----~dVVIN~aGPf  136 (184)
                      +..|++..    .++.+.+|+....    ....++++|+.|.+++.++++.    .|+|||++|..
T Consensus         2 a~~l~~~G----~~Vv~~~r~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~   59 (241)
T PRK12428          2 ARLLRFLG----ARVIGVDRREPGM----TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVP   59 (241)
T ss_pred             hHHHHhCC----CEEEEEeCCcchh----hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCC
Confidence            34555533    5677777765432    1246789999999999999874    79999999964

>PRK08589 short chain dehydrogenase; Validated

Probab=92.62  E-value=0.13  Score=43.03  Aligned_cols=77  Identities=12%  Similarity=0.121  Sum_probs=48.0

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhhc-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAKK-  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~~-  125 (184)
                      ++||+.-|.|-   .+|----++.+|++.  +  .++.+.+|++.+..      ....++.++.+|+.|++++.++++. 
T Consensus         4 l~~k~vlItGa---s~gIG~aia~~l~~~--G--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   76 (272)
T PRK08589          4 LENKVAVITGA---STGIGQASAIALAQE--G--AYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEI   76 (272)
T ss_pred             CCCCEEEEECC---CchHHHHHHHHHHHC--C--CEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH
Confidence            56676666652   122011144445544  3  67788887632211      0113578899999999999888764 


Q ss_pred             ------CcEEEeccccc
Q psy1304         126 ------CRVILNCVGPY  136 (184)
Q Consensus       126 ------~dVVIN~aGPf  136 (184)
                            .|++||++|..
T Consensus        77 ~~~~g~id~li~~Ag~~   93 (272)
T PRK08589         77 KEQFGRVDVLFNNAGVD   93 (272)
T ss_pred             HHHcCCcCEEEECCCCC
Confidence                  69999999854

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=92.60  E-value=1.2  Score=36.27  Aligned_cols=90  Identities=18%  Similarity=0.112  Sum_probs=63.3

Q ss_pred             cccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcCc
Q psy1304          48 GESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCR  127 (184)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~d  127 (184)
                      .+-++|-|+-                ++..|.+.  +  -++..+.|+.+........+++...|..|+.++...+++.+
T Consensus         6 ~GatG~~G~~----------------~~~~L~~~--~--~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~~G~~   65 (275)
T COG0702           6 TGATGFVGGA----------------VVRELLAR--G--HEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAKGVD   65 (275)
T ss_pred             EecccchHHH----------------HHHHHHhC--C--CEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHhcccc
Confidence            4556666666                77888866  3  45666666655433222679999999999999999999999


Q ss_pred             EEEecccccc-------ccchHHHHHHHHcC---CCEeeC
Q psy1304         128 VILNCVGPYT-------WYGEAVVKACIEAK---THHVDI  157 (184)
Q Consensus       128 VVIN~aGPf~-------~~g~~VaeACieAG---thYVDl  157 (184)
                      .++++.+...       .....+++++..++   .|++.+
T Consensus        66 ~~~~i~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~  105 (275)
T COG0702          66 GVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSL  105 (275)
T ss_pred             EEEEEecccccccchhHHHHHHHHHHHHHhcCCceEEEEe
Confidence            9999998442       22356667777766   446553

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=92.58  E-value=0.17  Score=40.94  Aligned_cols=59  Identities=12%  Similarity=0.016  Sum_probs=41.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+......       ...++.++.+|+.|++++.++++       +.|+||+++|..
T Consensus        20 la~~l~~~--g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~   92 (258)
T PRK12429         20 IALALAKE--G--AKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQ   92 (258)
T ss_pred             HHHHHHHC--C--CeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55566544  3  567777776532211       11457789999999999998887       479999999854

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=92.56  E-value=0.14  Score=41.47  Aligned_cols=100  Identities=14%  Similarity=0.109  Sum_probs=59.1

Q ss_pred             cccceeeecccccCCCCCC-CchhhhhhhCCCCCceeEEeeeecccccccC------CCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          53 FRGQTLSVQDKIRPGRGSN-PRPSAYKADAPTSNLTRLGLLGARDCLYREN------LIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~-~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~------~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      ++|+++.|-|    |.|.- ..++.+|++.  +  .++.+.+|+.+.....      ....+...+|..|.+++.+.+++
T Consensus        26 l~~~~vlVlG----gtG~iG~~~a~~l~~~--g--~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   97 (194)
T cd01078          26 LKGKTAVVLG----GTGPVGQRAAVLLARE--G--ARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG   97 (194)
T ss_pred             CCCCEEEEEC----CCCHHHHHHHHHHHHC--C--CEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc
Confidence            5566655554    11211 1256666654  3  4677777765432110      12456777899999999999999


Q ss_pred             CcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         126 CRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       126 ~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      +|+||||. |.........+.+.+.+.-.+|+.--+
T Consensus        98 ~diVi~at-~~g~~~~~~~~~~~~~~~vv~D~~~~~  132 (194)
T cd01078          98 ADVVFAAG-AAGVELLEKLAWAPKPLAVAADVNAVP  132 (194)
T ss_pred             CCEEEECC-CCCceechhhhcccCceeEEEEccCCC
Confidence            99999985 665442233333444456677765433

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=92.53  E-value=0.14  Score=47.04  Aligned_cols=94  Identities=13%  Similarity=0.120  Sum_probs=58.5

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC-CCCCEEEEeCCCHHHHHHH-h
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL-IDIPIIIADLKNESSILIM-A  123 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~-~~v~~v~vDv~D~~sL~a~-l  123 (184)
                      .|.+.+++.|+.                +...|+.+ |.  .+|.+..+++..|..-. ........|..+.++++.. +
T Consensus        42 aIvGATG~vG~e----------------LlrlL~~h-P~--~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~  102 (381)
T PLN02968         42 FVLGASGYTGAE----------------VRRLLANH-PD--FEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADF  102 (381)
T ss_pred             EEECCCChHHHH----------------HHHHHHhC-CC--CeEEEEEChhhcCCCchhhCccccCccccceecCCHHHh
Confidence            458888888887                77878866 67  77777666555443211 1111222233222222222 4


Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      +++|+|+.|+|.  .....++.+ ++.|+..||++++.
T Consensus       103 ~~~DvVf~Alp~--~~s~~i~~~-~~~g~~VIDlSs~f  137 (381)
T PLN02968        103 SDVDAVFCCLPH--GTTQEIIKA-LPKDLKIVDLSADF  137 (381)
T ss_pred             cCCCEEEEcCCH--HHHHHHHHH-HhCCCEEEEcCchh
Confidence            899999999863  344677777 47899999999854

>PRK06139 short chain dehydrogenase; Provisional

Probab=92.49  E-value=0.24  Score=43.77  Aligned_cols=58  Identities=17%  Similarity=0.205  Sum_probs=40.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++..|++.  +  .++.+.+|+++...+       ...++.++.+|+.|+++++++++       +.|++||++|-
T Consensus        23 ia~~la~~--G--~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~   94 (330)
T PRK06139         23 TAEAFARR--G--ARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGV   94 (330)
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence            44445444  3  678888886542210       11356688999999999998874       57999999983

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=92.48  E-value=0.17  Score=41.08  Aligned_cols=33  Identities=18%  Similarity=0.310  Sum_probs=27.7

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304         104 IDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      .++.++.+|+.|++++.++++       ..|+|||++|..
T Consensus        52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~   91 (248)
T PRK06947         52 GRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIV   91 (248)
T ss_pred             CcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            357899999999999887775       479999999954

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=92.42  E-value=0.064  Score=42.82  Aligned_cols=59  Identities=8%  Similarity=0.129  Sum_probs=41.0

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.....       ....++.++.+|+.|++++.+++++       .|.|||++|..
T Consensus        21 l~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   93 (246)
T PRK05653         21 IALRLAADG----AKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGIT   93 (246)
T ss_pred             HHHHHHHCC----CEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcC
Confidence            677777653    34666666543211       0124577888999999999888875       49999999764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=92.41  E-value=0.13  Score=42.81  Aligned_cols=59  Identities=15%  Similarity=0.177  Sum_probs=40.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+.+....       ...++.++++|+.|++++.++++       +.|+|||++|..
T Consensus        26 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~   98 (278)
T PRK08277         26 MAKELARA--G--AKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGN   98 (278)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55555543  3  577888876532111       11356788999999999988876       579999999954

>PRK08278 short chain dehydrogenase; Provisional

Probab=92.40  E-value=0.3  Score=40.99  Aligned_cols=58  Identities=7%  Similarity=0.007  Sum_probs=39.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc--------------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEec
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR--------------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNC  132 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~--------------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~  132 (184)
                      ++.+|++..    .++.+.+|+.....              ..-.++.++.+|+.|++++.++++       +.|+|||+
T Consensus        22 ia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~   97 (273)
T PRK08278         22 IALRAARDG----ANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNN   97 (273)
T ss_pred             HHHHHHHCC----CEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            555565443    56777777543210              011346688999999999998877       57999999


Q ss_pred             ccc
Q psy1304         133 VGP  135 (184)
Q Consensus       133 aGP  135 (184)
                      +|.
T Consensus        98 ag~  100 (273)
T PRK08278         98 ASA  100 (273)
T ss_pred             CCC
Confidence            985

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=92.40  E-value=0.061  Score=41.35  Aligned_cols=59  Identities=14%  Similarity=0.085  Sum_probs=38.2

Q ss_pred             HHHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEe-eCCCChHHHHHHHHHhHHHHHHcCC
Q psy1304         117 SSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHV-DITGEPYFMEYMQYEYNTRAQESEV  180 (184)
Q Consensus       117 ~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYV-DltGE~~~~~~ii~~lhe~AkaaGV  180 (184)
                      .++++++..+|+||.+.-|-.  ....++.|++.|++.| =.||-.+.  + +..+.+.|++.++
T Consensus        59 ~~l~~~~~~~DVvIDfT~p~~--~~~~~~~~~~~g~~~ViGTTG~~~~--~-~~~l~~~a~~~~v  118 (124)
T PF01113_consen   59 DDLEELLEEADVVIDFTNPDA--VYDNLEYALKHGVPLVIGTTGFSDE--Q-IDELEELAKKIPV  118 (124)
T ss_dssp             S-HHHHTTH-SEEEEES-HHH--HHHHHHHHHHHT-EEEEE-SSSHHH--H-HHHHHHHTTTSEE
T ss_pred             hhHHHhcccCCEEEEcCChHH--hHHHHHHHHhCCCCEEEECCCCCHH--H-HHHHHHHhccCCE
Confidence            468889989999999986643  3589999999999965 36665443  2 2456666666333

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK06101 short chain dehydrogenase; Provisional

Probab=92.38  E-value=0.16  Score=41.54  Aligned_cols=58  Identities=10%  Similarity=0.046  Sum_probs=41.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CCCCCCEEEEeCCCHHHHHHHhhc----CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NLIDIPIIIADLKNESSILIMAKK----CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D~~sL~a~l~~----~dVVIN~aGP  135 (184)
                      ++..|++.  +  .++.+.+|+.+...+   ...++.++++|+.|++++++++++    .|.+||++|.
T Consensus        17 la~~L~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~   81 (240)
T PRK06101         17 LALDYAKQ--G--WQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD   81 (240)
T ss_pred             HHHHHHhC--C--CEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence            66666654  4  677788886543211   124678999999999999999987    4788888874

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=92.38  E-value=0.3  Score=44.75  Aligned_cols=85  Identities=12%  Similarity=0.134  Sum_probs=63.9

Q ss_pred             hhhhhhhCCCCC----ceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhh--cCcEEEeccc------------
Q psy1304          74 PSAYKADAPTSN----LTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAK--KCRVILNCVG------------  134 (184)
Q Consensus        74 ~~~~La~~~~~~----~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aG------------  134 (184)
                      .+.|+.+..|+-    .=|+.-||+.+.+..- ..++..+++.|+.|.+.+.++++  +.|+|||-|-            
T Consensus        16 fvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~   95 (340)
T COG1088          16 FVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPA   95 (340)
T ss_pred             HHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEEechhccccccccChh
Confidence            678888777763    1177788877655321 22689999999999999999999  5899999763            


Q ss_pred             cccccc----hHHHHHHHHcCC--CEeeCC
Q psy1304         135 PYTWYG----EAVVKACIEAKT--HHVDIT  158 (184)
Q Consensus       135 Pf~~~g----~~VaeACieAGt--hYVDlt  158 (184)
                      ||.+++    .++++|+.+...  .|++++
T Consensus        96 ~Fi~TNv~GT~~LLEaar~~~~~frf~HIS  125 (340)
T COG1088          96 PFIQTNVVGTYTLLEAARKYWGKFRFHHIS  125 (340)
T ss_pred             hhhhcchHHHHHHHHHHHHhcccceEEEec
Confidence            455554    688999988885  577766

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=92.36  E-value=0.28  Score=39.16  Aligned_cols=59  Identities=10%  Similarity=-0.045  Sum_probs=39.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc--------ccCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY--------RENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg--------~~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  -++.+.+|+....        .....++.++.+|+.|++++.++++       +.|.||+++|..
T Consensus        21 l~~~l~~~--G--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   94 (248)
T PRK05557         21 IAERLAAQ--G--ANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGIT   94 (248)
T ss_pred             HHHHHHHC--C--CEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            55566654  3  4565555554311        0012456788889999999988876       479999999864

>PLN02778 3,5-epimerase/4-reductase

Probab=92.35  E-value=0.3  Score=42.29  Aligned_cols=74  Identities=14%  Similarity=0.072  Sum_probs=50.2

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      |.+.++|=|..                ++.+|....-+    +.+                 ...|+.|.+.+...++  
T Consensus        14 VtG~tGfiG~~----------------l~~~L~~~g~~----V~~-----------------~~~~~~~~~~v~~~l~~~   56 (298)
T PLN02778         14 IYGKTGWIGGL----------------LGKLCQEQGID----FHY-----------------GSGRLENRASLEADIDAV   56 (298)
T ss_pred             EECCCCHHHHH----------------HHHHHHhCCCE----EEE-----------------ecCccCCHHHHHHHHHhc
Confidence            37888898888                67777765433    221                 1134567777777777  


Q ss_pred             cCcEEEeccccccc-----c--------------chHHHHHHHHcCCCEeeC
Q psy1304         125 KCRVILNCVGPYTW-----Y--------------GEAVVKACIEAKTHHVDI  157 (184)
Q Consensus       125 ~~dVVIN~aGPf~~-----~--------------g~~VaeACieAGthYVDl  157 (184)
                      ++|+||||||+...     .              ...++++|.+.|++.+-+
T Consensus        57 ~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~  108 (298)
T PLN02778         57 KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNY  108 (298)
T ss_pred             CCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence            68999999997521     0              157899999999875433

>PRK07806 short chain dehydrogenase; Provisional

Probab=92.34  E-value=0.26  Score=39.97  Aligned_cols=33  Identities=15%  Similarity=0.079  Sum_probs=27.5

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304         104 IDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      .++.++++|+.|++++.++++       +.|+|||++|..
T Consensus        56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   95 (248)
T PRK07806         56 GRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGG   95 (248)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCC
Confidence            346788999999999988876       479999999854

>PRK05855 short chain dehydrogenase; Validated

Probab=92.33  E-value=0.11  Score=47.10  Aligned_cols=79  Identities=15%  Similarity=0.108  Sum_probs=51.3

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ..|++++.-|-|-   .+|    |..++++.....--++.+.+|+.....+       ...++.++.+|+.|++++.+++
T Consensus       311 ~~~~~~~~lv~G~---s~g----iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  383 (582)
T PRK05855        311 GPFSGKLVVVTGA---GSG----IGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFA  383 (582)
T ss_pred             ccCCCCEEEEECC---cCH----HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            4567777766651   122    5555553222211578888886532211       1135678999999999999988


Q ss_pred             hc-------CcEEEeccccc
Q psy1304         124 KK-------CRVILNCVGPY  136 (184)
Q Consensus       124 ~~-------~dVVIN~aGPf  136 (184)
                      +.       .|+|||++|..
T Consensus       384 ~~~~~~~g~id~lv~~Ag~~  403 (582)
T PRK05855        384 EWVRAEHGVPDIVVNNAGIG  403 (582)
T ss_pred             HHHHHhcCCCcEEEECCccC
Confidence            75       69999999975

>PRK06198 short chain dehydrogenase; Provisional

Probab=92.31  E-value=0.21  Score=40.88  Aligned_cols=77  Identities=14%  Similarity=0.100  Sum_probs=46.4

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCcee-EEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTR-LGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~-iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ++||++-|.|-   ..+---.++.+|++.  +  .+ |.+.+|+.+...       ....++.++.+|+.|++++.++++
T Consensus         4 ~~~k~vlItGa---~g~iG~~la~~l~~~--G--~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   76 (260)
T PRK06198          4 LDGKVALVTGG---TQGLGAAIARAFAER--G--AAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVA   76 (260)
T ss_pred             CCCcEEEEeCC---CchHHHHHHHHHHHC--C--CCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            56666666551   122111133444433  2  45 777777643221       011346678999999999988876


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             +.|++|||+|..
T Consensus        77 ~~~~~~g~id~li~~ag~~   95 (260)
T PRK06198         77 AADEAFGRLDALVNAAGLT   95 (260)
T ss_pred             HHHHHhCCCCEEEECCCcC
Confidence                   479999999863

>PRK07109 short chain dehydrogenase; Provisional

Probab=92.27  E-value=0.14  Score=44.95  Aligned_cols=59  Identities=12%  Similarity=0.031  Sum_probs=41.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+       ...++.++.+|+.|+++++++++       +.|++||++|..
T Consensus        24 la~~la~~--G--~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~   96 (334)
T PRK07109         24 TARAFARR--G--AKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVT   96 (334)
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcC
Confidence            55555554  3  577787776532111       11356789999999999998876       579999999853

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=92.26  E-value=0.19  Score=40.83  Aligned_cols=77  Identities=16%  Similarity=0.122  Sum_probs=46.7

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-----ccCCCCCCEEEEeCCCHHHHHHHhh---
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-----RENLIDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-----~~~~~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      |+||++-|-|-   +.+----++.+|++.  +  .++.+.+|+....     ......+.++.+|+.|++++.++++   
T Consensus         3 ~~~k~vlItGa---s~gIG~~ia~~l~~~--G--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (248)
T TIGR01832         3 LEGKVALVTGA---NTGLGQGIAVGLAEA--G--ADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAV   75 (248)
T ss_pred             CCCCEEEEECC---CchHHHHHHHHHHHC--C--CEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            66777776651   111000134444443  3  5677777754110     0011357789999999999987775   


Q ss_pred             ----cCcEEEeccccc
Q psy1304         125 ----KCRVILNCVGPY  136 (184)
Q Consensus       125 ----~~dVVIN~aGPf  136 (184)
                          +.|++||++|-.
T Consensus        76 ~~~~~~d~li~~ag~~   91 (248)
T TIGR01832        76 EEFGHIDILVNNAGII   91 (248)
T ss_pred             HHcCCCCEEEECCCCC
Confidence                489999999853

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=92.22  E-value=0.24  Score=40.58  Aligned_cols=75  Identities=19%  Similarity=0.237  Sum_probs=45.4

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      ++||+.-|.|-   .++--.-++.+|++.  +  .++.+.+|++....      ....++.++.+|+.|++++.++++  
T Consensus         6 ~~~k~vlVtGa---s~gIG~~la~~l~~~--G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (260)
T PRK12823          6 FAGKVVVVTGA---AQGIGRGVALRAAAE--G--ARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAA   78 (260)
T ss_pred             cCCCEEEEeCC---CchHHHHHHHHHHHC--C--CEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHH
Confidence            56666666551   112001144445443  3  56777777642210      011346688999999999888877  


Q ss_pred             -----cCcEEEeccc
Q psy1304         125 -----KCRVILNCVG  134 (184)
Q Consensus       125 -----~~dVVIN~aG  134 (184)
                           +.|++||++|
T Consensus        79 ~~~~~~id~lv~nAg   93 (260)
T PRK12823         79 VEAFGRIDVLINNVG   93 (260)
T ss_pred             HHHcCCCeEEEECCc
Confidence                 4799999997

>PRK09134 short chain dehydrogenase; Provisional

Probab=92.21  E-value=0.19  Score=41.41  Aligned_cols=33  Identities=15%  Similarity=0.287  Sum_probs=28.1

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304         104 IDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      .++.++.+|+.|.+++.+++++       .|+||||+|+.
T Consensus        59 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~   98 (258)
T PRK09134         59 RRAVALQADLADEAEVRALVARASAALGPITLLVNNASLF   98 (258)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCC
Confidence            3577899999999999998875       59999999964

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=92.15  E-value=0.4  Score=42.76  Aligned_cols=91  Identities=12%  Similarity=0.036  Sum_probs=60.6

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhC-CCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHHHHHHh
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADA-PTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~-~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .|.+.+++.|+.                ++..|++. .|.  .++....+++..+... ....+....|+++.     .+
T Consensus         5 ~IvGAtG~vG~~----------------l~~lL~~~~hp~--~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~   61 (334)
T PRK14874          5 AVVGATGAVGRE----------------MLNILEERNFPV--DKLRLLASARSAGKELSFKGKELKVEDLTTF-----DF   61 (334)
T ss_pred             EEECCCCHHHHH----------------HHHHHHhCCCCc--ceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HH
Confidence            357888888888                77888853 455  4555554544433321 12345555566432     23


Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      +++|+|+.|+|-+  ....++...+++|+.-||++++.
T Consensus        62 ~~vDvVf~A~g~g--~s~~~~~~~~~~G~~VIDlS~~~   97 (334)
T PRK14874         62 SGVDIALFSAGGS--VSKKYAPKAAAAGAVVIDNSSAF   97 (334)
T ss_pred             cCCCEEEECCChH--HHHHHHHHHHhCCCEEEECCchh
Confidence            6899999999754  34678888889999999999864

>PRK07576 short chain dehydrogenase; Provisional

Probab=92.11  E-value=0.11  Score=43.28  Aligned_cols=74  Identities=12%  Similarity=0.068  Sum_probs=46.5

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ++||++-|-|-   .++    |..++++..  .+  .++.+.+|+.+....       ...+..++.+|+.|++++.+++
T Consensus         7 ~~~k~ilItGa---sgg----IG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~   77 (264)
T PRK07576          7 FAGKNVVVVGG---TSG----INLGIAQAFARAG--ANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAF   77 (264)
T ss_pred             CCCCEEEEECC---Cch----HHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHH
Confidence            56777666651   112    445444211  24  677777775432110       1134567899999999999988


Q ss_pred             hc-------CcEEEecccc
Q psy1304         124 KK-------CRVILNCVGP  135 (184)
Q Consensus       124 ~~-------~dVVIN~aGP  135 (184)
                      ++       .|+|||++|.
T Consensus        78 ~~~~~~~~~iD~vi~~ag~   96 (264)
T PRK07576         78 AQIADEFGPIDVLVSGAAG   96 (264)
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            75       5999999974

>PRK08017 oxidoreductase; Provisional

Probab=92.08  E-value=1.2  Score=36.18  Aligned_cols=58  Identities=16%  Similarity=0.035  Sum_probs=38.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhc--------CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKK--------CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~--------~dVVIN~aGP  135 (184)
                      ++.+|++..    .++.+.+|+.+..+. ....+.++++|+.|.+++..++++        .|.+||++|.
T Consensus        18 la~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~   84 (256)
T PRK08017         18 AALELKRRG----YRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGF   84 (256)
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCC
Confidence            667776553    456666676533211 112478899999999988776543        5899999984

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.05  E-value=0.2  Score=41.23  Aligned_cols=32  Identities=9%  Similarity=-0.051  Sum_probs=27.1

Q ss_pred             CCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304         105 DIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.++.+|+.|++++.++++.       .|+|||++|.+
T Consensus        68 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~  106 (256)
T PRK12748         68 RCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYS  106 (256)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence            578999999999998887764       69999999853

>PRK06914 short chain dehydrogenase; Provisional

Probab=92.04  E-value=0.14  Score=42.48  Aligned_cols=59  Identities=14%  Similarity=0.041  Sum_probs=39.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc--------C-CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE--------N-LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~-~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      ++..|++.  +  .++.+.+|+.+....        . ..++.++.+|+.|++++++ ++       +.|+||||+|...
T Consensus        19 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~   93 (280)
T PRK06914         19 TTLELAKK--G--YLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYAN   93 (280)
T ss_pred             HHHHHHhC--C--CEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccc
Confidence            66667655  3  567777775431110        0 1357889999999999876 44       3699999998643

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.04  E-value=0.23  Score=41.55  Aligned_cols=76  Identities=16%  Similarity=0.048  Sum_probs=45.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhC--CCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADA--PTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~--~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ++||+.-|.|--+     +.-|-.++|+.  -.+  .++.+.+|++...+      ...+...++++|+.|+++++++++
T Consensus         6 ~~~k~~lITGas~-----~~GIG~a~a~~la~~G--~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~   78 (260)
T PRK06603          6 LQGKKGLITGIAN-----NMSISWAIAQLAKKHG--AELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFD   78 (260)
T ss_pred             cCCcEEEEECCCC-----CcchHHHHHHHHHHcC--CEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHH
Confidence            5678877777322     11143444422  124  67888877532110      011222357899999999998885


Q ss_pred             -------cCcEEEecccc
Q psy1304         125 -------KCRVILNCVGP  135 (184)
Q Consensus       125 -------~~dVVIN~aGP  135 (184)
                             ..|++||++|.
T Consensus        79 ~~~~~~g~iDilVnnag~   96 (260)
T PRK06603         79 DIKEKWGSFDFLLHGMAF   96 (260)
T ss_pred             HHHHHcCCccEEEEcccc
Confidence                   37999999984

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.01  E-value=0.26  Score=41.71  Aligned_cols=81  Identities=17%  Similarity=0.104  Sum_probs=50.8

Q ss_pred             ccCccccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHH
Q psy1304          49 ESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~  120 (184)
                      +|.-++||+.-|-|-     +++..|-.++|+..  .+  .++.+.+|++...+      ...+...++++|+.|+++++
T Consensus         4 ~~~~~~~k~~lItGa-----s~~~GIG~aia~~la~~G--~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~   76 (272)
T PRK08159          4 ASGLMAGKRGLILGV-----ANNRSIAWGIAKACRAAG--AELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASID   76 (272)
T ss_pred             ccccccCCEEEEECC-----CCCCcHHHHHHHHHHHCC--CEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHH
Confidence            355567888777761     11223555555322  33  67888776531110      11233557899999999999


Q ss_pred             HHhhc-------CcEEEeccccc
Q psy1304         121 IMAKK-------CRVILNCVGPY  136 (184)
Q Consensus       121 a~l~~-------~dVVIN~aGPf  136 (184)
                      ++++.       .|++||++|-.
T Consensus        77 ~~~~~~~~~~g~iD~lv~nAG~~   99 (272)
T PRK08159         77 AVFETLEKKWGKLDFVVHAIGFS   99 (272)
T ss_pred             HHHHHHHHhcCCCcEEEECCccc
Confidence            88763       69999999843

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=91.99  E-value=0.21  Score=39.84  Aligned_cols=59  Identities=7%  Similarity=0.039  Sum_probs=39.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc-----c---cCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY-----R---ENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg-----~---~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+....     .   ....++.++.+|+.|++++++++++       .|.|||++|..
T Consensus        14 la~~l~~~--G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   87 (239)
T TIGR01830        14 IALKLAKE--G--AKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGIT   87 (239)
T ss_pred             HHHHHHHC--C--CEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            55666654  3  4566666654110     0   0112467899999999999988865       59999999964

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=91.93  E-value=0.26  Score=39.83  Aligned_cols=58  Identities=10%  Similarity=0.086  Sum_probs=39.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++.+|++..    .++.+..|+.....       ....++.++.+|+.|.++++++++       +.|+|||++|.
T Consensus        19 la~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~   90 (250)
T TIGR03206        19 TCRRFAEEG----AKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGW   90 (250)
T ss_pred             HHHHHHHCC----CEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            455555443    46666666543211       012457889999999999999886       47999999973

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06483 dihydromonapterin reductase; Provisional

Probab=91.90  E-value=0.19  Score=40.77  Aligned_cols=59  Identities=12%  Similarity=0.083  Sum_probs=39.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCC--CCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENL--IDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~--~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+........  ....++.+|+.|++++.+++++       .|++||++|-+
T Consensus        18 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~   85 (236)
T PRK06483         18 LAWHLLAQ--G--QPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDW   85 (236)
T ss_pred             HHHHHHHC--C--CeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccc
Confidence            44555543  3  57777777653211111  2367899999999999887654       69999999853

>PRK07677 short chain dehydrogenase; Provisional

Probab=91.83  E-value=0.16  Score=41.72  Aligned_cols=59  Identities=12%  Similarity=0.122  Sum_probs=40.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+......       ...++.++.+|+.|+++++++++       ..|+|||++|..
T Consensus        17 ia~~l~~~--G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~   89 (252)
T PRK07677         17 MAKRFAEE--G--ANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGN   89 (252)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCC
Confidence            55555554  3  567777776432110       11357789999999999988776       469999999854

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=91.82  E-value=0.19  Score=41.53  Aligned_cols=61  Identities=18%  Similarity=0.179  Sum_probs=40.8

Q ss_pred             hhhhhhhC--CCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHHHhhcC-----------cEEEe
Q psy1304          74 PSAYKADA--PTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILIMAKKC-----------RVILN  131 (184)
Q Consensus        74 ~~~~La~~--~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a~l~~~-----------dVVIN  131 (184)
                      ++.+|++.  ..+  .++.+.+|+.....+         ...++.++.+|+.|+++++++++..           ++|||
T Consensus        16 ~a~~la~~~~~~g--~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~   93 (256)
T TIGR01500        16 IAQELAKCLKSPG--SVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLIN   93 (256)
T ss_pred             HHHHHHHhhccCC--cEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEe
Confidence            44555542  245  788888886532110         1135678999999999998887642           58999


Q ss_pred             ccccc
Q psy1304         132 CVGPY  136 (184)
Q Consensus       132 ~aGPf  136 (184)
                      ++|-+
T Consensus        94 nAG~~   98 (256)
T TIGR01500        94 NAGTL   98 (256)
T ss_pred             CCccc
Confidence            99853

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07102 short chain dehydrogenase; Provisional

Probab=91.80  E-value=0.16  Score=41.41  Aligned_cols=59  Identities=17%  Similarity=0.114  Sum_probs=41.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHhhc----CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMAKK----CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l~~----~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+        ...++.++++|+.|+++++++++.    .|+|||++|..
T Consensus        17 ~a~~l~~~--G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~~ag~~   87 (243)
T PRK07102         17 CARRYAAA--G--ARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVLIAVGTL   87 (243)
T ss_pred             HHHHHHhc--C--CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEEECCcCC
Confidence            55666654  3  567777776532211        114678999999999999988775    59999999854

>PRK07201 short chain dehydrogenase; Provisional

Probab=91.79  E-value=0.19  Score=47.15  Aligned_cols=75  Identities=13%  Similarity=0.119  Sum_probs=49.7

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      .++||++-|.|-       ...|..++++..  .+  .++.+.+|+.+...+       ...++.++.+|+.|+++++++
T Consensus       368 ~~~~k~vlItGa-------s~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~  438 (657)
T PRK07201        368 PLVGKVVLITGA-------SSGIGRATAIKVAEAG--ATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHT  438 (657)
T ss_pred             CCCCCEEEEeCC-------CCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            466777777651       122545555321  23  678888876543211       124578899999999999998


Q ss_pred             hh-------cCcEEEecccc
Q psy1304         123 AK-------KCRVILNCVGP  135 (184)
Q Consensus       123 l~-------~~dVVIN~aGP  135 (184)
                      ++       +.|+|||++|.
T Consensus       439 ~~~~~~~~g~id~li~~Ag~  458 (657)
T PRK07201        439 VKDILAEHGHVDYLVNNAGR  458 (657)
T ss_pred             HHHHHHhcCCCCEEEECCCC
Confidence            87       58999999994

>PRK07074 short chain dehydrogenase; Provisional

Probab=91.77  E-value=0.15  Score=41.69  Aligned_cols=59  Identities=14%  Similarity=0.089  Sum_probs=40.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-----CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-----NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-----~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+......     ....+.++.+|+.|++++..++++       .|+|||++|..
T Consensus        18 la~~L~~~--g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   88 (257)
T PRK07074         18 LARRFLAA--G--DRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAA   88 (257)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            66677654  3  466777775432110     013577889999999999888874       79999999853

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=91.74  E-value=0.19  Score=41.71  Aligned_cols=59  Identities=15%  Similarity=0.144  Sum_probs=41.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+....       ...++.++++|+.|++++++++..       .|+||||+|..
T Consensus        26 ia~~l~~~G----~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~   98 (265)
T PRK07097         26 IAKAYAKAG----ATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGII   98 (265)
T ss_pred             HHHHHHHCC----CeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            556666543    567777765432110       113577899999999999998864       69999999964

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=91.70  E-value=0.14  Score=42.26  Aligned_cols=59  Identities=10%  Similarity=0.095  Sum_probs=41.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+......      ..+++.++++|+.|+++++++++       +.|+|||++|..
T Consensus        16 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~   87 (259)
T PRK08340         16 VARELLKK--G--ARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNV   87 (259)
T ss_pred             HHHHHHHc--C--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            55555554  3  678888876532110      11357789999999999998885       479999999953

>PRK12829 short chain dehydrogenase; Provisional

Probab=91.66  E-value=0.2  Score=40.90  Aligned_cols=59  Identities=15%  Similarity=0.180  Sum_probs=39.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CCC--CCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NLI--DIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~--~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    -++.+.+|++.....   ...  ++.++.+|+.|++++..+++       ++|+|||++|+.
T Consensus        27 ~a~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   97 (264)
T PRK12829         27 IAEAFAEAG----ARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIA   97 (264)
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            455555443    456677775432110   112  45789999999999988876       589999999976

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=91.65  E-value=0.17  Score=41.12  Aligned_cols=34  Identities=15%  Similarity=0.218  Sum_probs=29.3

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccccc
Q psy1304         104 IDIPIIIADLKNESSILIMAKK-------CRVILNCVGPYT  137 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf~  137 (184)
                      .++.++.+|+.|++++.+++++       .|+||||+|.+.
T Consensus        56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~   96 (247)
T PRK12935         56 HDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITR   96 (247)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            3577899999999999999887       699999999754

>PRK12939 short chain dehydrogenase; Provisional

Probab=91.51  E-value=0.24  Score=39.90  Aligned_cols=33  Identities=21%  Similarity=0.132  Sum_probs=28.2

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304         104 IDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      .++.++.+|+.|++++.++++       +.|+||||+|..
T Consensus        56 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   95 (250)
T PRK12939         56 GRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGIT   95 (250)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            457889999999999998885       589999999963

>PRK06500 short chain dehydrogenase; Provisional

Probab=91.46  E-value=0.22  Score=40.23  Aligned_cols=58  Identities=12%  Similarity=0.077  Sum_probs=38.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++.+|++..    .++.+.+|+.+...+    ...++.++++|+.|.+++.++++       +.|+|||++|.
T Consensus        22 la~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~   90 (249)
T PRK06500         22 TARQFLAEG----ARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGV   90 (249)
T ss_pred             HHHHHHHCC----CEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence            555555543    567777776432111    11356788999999988877655       57999999985

>PRK07041 short chain dehydrogenase; Provisional

Probab=91.44  E-value=0.26  Score=39.53  Aligned_cols=58  Identities=7%  Similarity=0.001  Sum_probs=41.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhhc---CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAKK---CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~~---~dVVIN~aGP  135 (184)
                      ++..|++..    .++.+.+|+.+....      ...++.++.+|+.|++++.++++.   .|++||++|-
T Consensus        13 ~a~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~   79 (230)
T PRK07041         13 LARAFAAEG----ARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAAD   79 (230)
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            666666553    567777776432110      124577899999999999999986   6999999984

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=91.41  E-value=0.15  Score=41.75  Aligned_cols=58  Identities=14%  Similarity=0.035  Sum_probs=40.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------C--CCCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------N--LIDIPIIIADLKNESSILIMAKK-------CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~--~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGP  135 (184)
                      ++.+|++.  +  .++.+.+|+......       .  ..++.++.+|+.|++++.+++++       .|+|||++|.
T Consensus        18 la~~l~~~--g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~   91 (259)
T PRK12384         18 LCHGLAEE--G--YRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGI   91 (259)
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            55666654  4  677777775421110       0  13577899999999999888764       6999999984

>PRK06701 short chain dehydrogenase; Provisional

Probab=91.40  E-value=0.23  Score=42.47  Aligned_cols=80  Identities=10%  Similarity=0.109  Sum_probs=49.8

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeCCCHHHHHH
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv~D~~sL~a  121 (184)
                      +..++||++-|.|-   +.+---.++.+|++.  +  .++.+.+|++....        ....++.++.+|+.|.+++.+
T Consensus        41 ~~~~~~k~iLItGa---sggIG~~la~~l~~~--G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~  113 (290)
T PRK06701         41 SGKLKGKVALITGG---DSGIGRAVAVLFAKE--G--ADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKD  113 (290)
T ss_pred             ccCCCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            34677888777762   222111134444443  3  67777777542110        011346789999999999988


Q ss_pred             Hhh-------cCcEEEeccccc
Q psy1304         122 MAK-------KCRVILNCVGPY  136 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGPf  136 (184)
                      +++       +.|+|||++|..
T Consensus       114 ~~~~i~~~~~~iD~lI~~Ag~~  135 (290)
T PRK06701        114 AVEETVRELGRLDILVNNAAFQ  135 (290)
T ss_pred             HHHHHHHHcCCCCEEEECCccc
Confidence            886       469999999853

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=91.33  E-value=0.28  Score=37.26  Aligned_cols=60  Identities=18%  Similarity=0.166  Sum_probs=44.0

Q ss_pred             hhhhhhhCCCCCceeEEeeeec--cc--------ccccCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGAR--DC--------LYRENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr--~~--------lg~~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++. .+  -++.+.+|+  ..        +. ....++.++++|+.|+++++++++       ..|++|||+|.+
T Consensus        16 ~a~~l~~~-g~--~~v~~~~r~~~~~~~~~l~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~   91 (167)
T PF00106_consen   16 LARALARR-GA--RVVILTSRSEDSEGAQELIQELK-APGAKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIF   91 (167)
T ss_dssp             HHHHHHHT-TT--EEEEEEESSCHHHHHHHHHHHHH-HTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCT
T ss_pred             HHHHHHhc-Cc--eEEEEeeeccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccc
Confidence            55666655 33  688888888  21        11 122668899999999999998876       468999999987


Q ss_pred             c
Q psy1304         137 T  137 (184)
Q Consensus       137 ~  137 (184)
                      .
T Consensus        92 ~   92 (167)
T PF00106_consen   92 S   92 (167)
T ss_dssp             T
T ss_pred             c
Confidence            6

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08219 short chain dehydrogenase; Provisional

Probab=91.31  E-value=0.2  Score=39.84  Aligned_cols=59  Identities=17%  Similarity=0.095  Sum_probs=40.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc---cCCCCCCEEEEeCCCHHHHHHHhh---cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR---ENLIDIPIIIADLKNESSILIMAK---KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~---~~~~~v~~v~vDv~D~~sL~a~l~---~~dVVIN~aGPf~  137 (184)
                      ++..|++. -    ++.+.+|+.....   .....+.++++|+.|++++.++++   +.|.|||++|...
T Consensus        19 l~~~l~~~-~----~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~   83 (227)
T PRK08219         19 IARELAPT-H----TLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVAD   83 (227)
T ss_pred             HHHHHHhh-C----CEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence            66666654 2    3455556543211   012457899999999999999998   4899999999753

>PRK07023 short chain dehydrogenase; Provisional

Probab=91.30  E-value=0.35  Score=39.30  Aligned_cols=59  Identities=7%  Similarity=-0.053  Sum_probs=39.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc--cCCCCCCEEEEeCCCHHHHHHHhhc-----------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR--ENLIDIPIIIADLKNESSILIMAKK-----------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~--~~~~~v~~v~vDv~D~~sL~a~l~~-----------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.....  ....++.++++|+.|++++++++.+           .|.+||++|..
T Consensus        17 ia~~l~~~--G--~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~   88 (243)
T PRK07023         17 LAEQLLQP--G--IAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTV   88 (243)
T ss_pred             HHHHHHhC--C--CEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCccc
Confidence            55666654  3  56666666543211  1114578899999999999986543           57999999864

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=91.29  E-value=0.3  Score=41.33  Aligned_cols=50  Identities=8%  Similarity=0.065  Sum_probs=31.7

Q ss_pred             EEEeCCCHHHHHH----Hhh-----cCcEEEeccccccc----------c----chHHHHHHHHcCCCEeeCC
Q psy1304         109 IIADLKNESSILI----MAK-----KCRVILNCVGPYTW----------Y----GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       109 v~vDv~D~~sL~a----~l~-----~~dVVIN~aGPf~~----------~----g~~VaeACieAGthYVDlt  158 (184)
                      ..+|+.|..+.+.    +++     ++|+||||||-...          .    ..+++++|.+.|+.+|-++
T Consensus        43 ~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~S  115 (308)
T PRK11150         43 VDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYAS  115 (308)
T ss_pred             hhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEc
Confidence            4456665443333    332     68999999972211          0    1579999999998866553

>PRK12746 short chain dehydrogenase; Provisional

Probab=91.28  E-value=0.29  Score=39.92  Aligned_cols=32  Identities=19%  Similarity=0.248  Sum_probs=27.7

Q ss_pred             CCCEEEEeCCCHHHHHHHhh-------------cCcEEEeccccc
Q psy1304         105 DIPIIIADLKNESSILIMAK-------------KCRVILNCVGPY  136 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~-------------~~dVVIN~aGPf  136 (184)
                      .+.++.+|+.|++++.++++             +.|+|||++|..
T Consensus        57 ~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~  101 (254)
T PRK12746         57 KAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIG  101 (254)
T ss_pred             cEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCC
Confidence            46789999999999998877             479999999964

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=91.27  E-value=0.24  Score=40.74  Aligned_cols=59  Identities=12%  Similarity=-0.034  Sum_probs=39.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+......       ...++.++.+|+.|.+++.++++.       .|++|||+|..
T Consensus        27 la~~l~~~G----~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~   99 (255)
T PRK06113         27 IAITFATAG----ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGG   99 (255)
T ss_pred             HHHHHHHCC----CeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            555555543    566677765432110       113567889999999999887764       59999999853

>PLN02572 UDP-sulfoquinovose synthase

Probab=91.27  E-value=0.79  Score=42.27  Aligned_cols=48  Identities=15%  Similarity=0.104  Sum_probs=38.5

Q ss_pred             CCCEEEEeCCCHHHHHHHhhc--CcEEEecccc----ccc-----------cc----hHHHHHHHHcCC
Q psy1304         105 DIPIIIADLKNESSILIMAKK--CRVILNCVGP----YTW-----------YG----EAVVKACIEAKT  152 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGP----f~~-----------~g----~~VaeACieAGt  152 (184)
                      +++++.+|+.|++++.+++++  +|+|||+++.    +..           .+    ..++++|.+.|+
T Consensus       114 ~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv  182 (442)
T PLN02572        114 EIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP  182 (442)
T ss_pred             cceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            578999999999999999985  8999999954    211           11    678899999886

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.26  E-value=0.41  Score=38.91  Aligned_cols=58  Identities=17%  Similarity=0.064  Sum_probs=39.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++..|++..    .++.+.+|+.....        ....++.++.+|+.|++++.++++       ..|+||||+|.
T Consensus        18 la~~L~~~g----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~   90 (256)
T PRK12745         18 IARALAAAG----FDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGV   90 (256)
T ss_pred             HHHHHHHCC----CEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCcc
Confidence            566666553    45666666532110        011357899999999999888776       46999999984

>PRK07831 short chain dehydrogenase; Provisional

Probab=91.26  E-value=0.24  Score=40.90  Aligned_cols=79  Identities=15%  Similarity=0.252  Sum_probs=48.9

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHH
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a  121 (184)
                      ..++||++-|-|--  |+|--..++..|++..    .++.+.+|+......         ...++.++++|+.|++++++
T Consensus        13 ~~~~~k~vlItG~s--g~gIG~~ia~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   86 (262)
T PRK07831         13 GLLAGKVVLVTAAA--GTGIGSATARRALEEG----ARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDA   86 (262)
T ss_pred             cccCCCEEEEECCC--cccHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHH
Confidence            34567887777621  1121122555555544    456776665421110         01356789999999999998


Q ss_pred             Hhh-------cCcEEEecccc
Q psy1304         122 MAK-------KCRVILNCVGP  135 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGP  135 (184)
                      +++       ..|+||||+|.
T Consensus        87 ~~~~~~~~~g~id~li~~ag~  107 (262)
T PRK07831         87 LIDAAVERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            886       46999999994

>PRK12937 short chain dehydrogenase; Provisional

Probab=91.26  E-value=0.21  Score=40.21  Aligned_cols=33  Identities=15%  Similarity=0.219  Sum_probs=28.5

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304         104 IDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      .++.++.+|+.|++++.++++       +.|+|||++|..
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   94 (245)
T PRK12937         55 GRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVM   94 (245)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            457889999999999999988       579999999953

>TIGR02415 23BDH acetoin reductases

Probab=91.25  E-value=0.26  Score=40.02  Aligned_cols=59  Identities=8%  Similarity=0.018  Sum_probs=39.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc-------ccCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY-------RENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg-------~~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+-+|+....       .....++.++.+|+.|++++.++++.       .|+|||++|..
T Consensus        16 la~~l~~~G----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~   88 (254)
T TIGR02415        16 IAERLAKDG----FAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVA   88 (254)
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            556666543    5666666653211       01123577889999999999888764       59999999864

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.16  E-value=0.18  Score=40.24  Aligned_cols=31  Identities=13%  Similarity=0.261  Sum_probs=27.0

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccc
Q psy1304         104 IDIPIIIADLKNESSILIMAKK-------CRVILNCVG  134 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aG  134 (184)
                      .++.++.+|+.|++++.+++++       .|+|||++|
T Consensus        56 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag   93 (249)
T PRK12825         56 RRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAG   93 (249)
T ss_pred             CceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            4578899999999999988864       699999999

>PRK09072 short chain dehydrogenase; Provisional

Probab=91.14  E-value=0.23  Score=40.94  Aligned_cols=59  Identities=22%  Similarity=0.160  Sum_probs=41.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhh------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAK------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+......      ...++.++.+|+.|++++.++++      ..|+|||++|..
T Consensus        21 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~~ag~~   91 (263)
T PRK09072         21 LAEALAAA--G--ARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVLINNAGVN   91 (263)
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            56666654  3  567777776532110      11367899999999999888766      469999999964

>PRK06123 short chain dehydrogenase; Provisional

Probab=91.11  E-value=0.28  Score=39.75  Aligned_cols=32  Identities=19%  Similarity=0.367  Sum_probs=27.7

Q ss_pred             CCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304         105 DIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      .+.++.+|+.|++++.++++       ..|+|||++|..
T Consensus        53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~   91 (248)
T PRK06123         53 EALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGIL   91 (248)
T ss_pred             cEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            46689999999999999887       469999999965

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=91.04  E-value=0.64  Score=40.18  Aligned_cols=59  Identities=12%  Similarity=0.152  Sum_probs=41.1

Q ss_pred             hhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         123 AKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       123 l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      -.+.|+||.|++|-..  ...++.|+++|.|.+-.+-..---.+....+.+.|++.|+.+.
T Consensus        59 ~~~~DvVve~t~~~~~--~e~~~~aL~aGk~Vvi~s~~Al~d~~~~~~L~~~A~~~g~~l~  117 (265)
T PRK13303         59 PQRPDLVVECAGHAAL--KEHVVPILKAGIDCAVISVGALADEALRERLEQAAEAGGARLH  117 (265)
T ss_pred             ccCCCEEEECCCHHHH--HHHHHHHHHcCCCEEEeChHHhcCHHHHHHHHHHHHHCCCEEE
Confidence            3569999999987633  6899999999999875432111112223567888999997653

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=91.02  E-value=0.36  Score=40.97  Aligned_cols=70  Identities=13%  Similarity=0.112  Sum_probs=42.9

Q ss_pred             cccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCC--HHHHHHHhhc
Q psy1304          48 GESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKN--ESSILIMAKK  125 (184)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D--~~sL~a~l~~  125 (184)
                      ..|++|-|.-                ++.+|++..    -++.+..++.........+++++.++..+  .+.+.+.+++
T Consensus        22 N~SSG~iG~a----------------LA~~L~~~G----~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~   81 (229)
T PRK06732         22 NHSTGQLGKI----------------IAETFLAAG----HEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKD   81 (229)
T ss_pred             CccchHHHHH----------------HHHHHHhCC----CEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcC
Confidence            5678888877                777777654    34444444332211112345666655433  2466677788


Q ss_pred             CcEEEecccccc
Q psy1304         126 CRVILNCVGPYT  137 (184)
Q Consensus       126 ~dVVIN~aGPf~  137 (184)
                      .|+||||||...
T Consensus        82 ~DivIh~AAvsd   93 (229)
T PRK06732         82 HDVLIHSMAVSD   93 (229)
T ss_pred             CCEEEeCCccCC
Confidence            999999999753

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=91.01  E-value=0.35  Score=41.74  Aligned_cols=46  Identities=7%  Similarity=-0.018  Sum_probs=36.5

Q ss_pred             CCCEEEEeCCCHHHHHHHhhc--CcEEEecccccccc----------------chHHHHHHHHc
Q psy1304         105 DIPIIIADLKNESSILIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEA  150 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieA  150 (184)
                      +++++.+|+.|.+++.+++++  +|+||||+|+....                ...++++|.+.
T Consensus        51 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~  114 (352)
T PRK10084         51 RYVFEHADICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNY  114 (352)
T ss_pred             ceEEEEecCCCHHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHh
Confidence            467889999999999999975  89999999964310                16788888763

>PRK06484 short chain dehydrogenase; Validated

Probab=91.01  E-value=0.64  Score=42.50  Aligned_cols=79  Identities=15%  Similarity=0.074  Sum_probs=49.3

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc----cCCCCCCEEEEeCCCHHHHHHHhhc-
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR----ENLIDIPIIIADLKNESSILIMAKK-  125 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~----~~~~~v~~v~vDv~D~~sL~a~l~~-  125 (184)
                      ..+.||+.-|-|--   +|----++..|++..    .++.+.+|+.....    ....+...+.+|+.|++++.++++. 
T Consensus       265 ~~~~~k~~lItGas---~gIG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  337 (520)
T PRK06484        265 LAESPRVVAITGGA---RGIGRAVADRFAAAG----DRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQI  337 (520)
T ss_pred             cccCCCEEEEECCC---cHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHH
Confidence            35678877776622   220011344444433    57888887653211    0113456789999999999988864 


Q ss_pred             ------CcEEEeccccc
Q psy1304         126 ------CRVILNCVGPY  136 (184)
Q Consensus       126 ------~dVVIN~aGPf  136 (184)
                            .|++||++|..
T Consensus       338 ~~~~g~id~li~nAg~~  354 (520)
T PRK06484        338 QARWGRLDVLVNNAGIA  354 (520)
T ss_pred             HHHcCCCCEEEECCCCc
Confidence                  69999999953

>PRK07774 short chain dehydrogenase; Provisional

Probab=90.97  E-value=0.38  Score=38.98  Aligned_cols=58  Identities=10%  Similarity=-0.054  Sum_probs=39.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++.+|+...    -++.+.+|+......       ......++.+|+.|++++.++++       ..|+|||++|.
T Consensus        22 la~~l~~~g----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~   93 (250)
T PRK07774         22 YAEALAREG----ASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAI   93 (250)
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence            566666543    567777775432110       11245688999999999988777       47999999994

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=90.96  E-value=0.35  Score=38.84  Aligned_cols=61  Identities=13%  Similarity=0.171  Sum_probs=38.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecc-ccc---------ccCCCCCCEEEEeCCCHHHHHHHhhcC-------cEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARD-CLY---------RENLIDIPIIIADLKNESSILIMAKKC-------RVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~-~lg---------~~~~~~v~~v~vDv~D~~sL~a~l~~~-------dVVIN~aGPf  136 (184)
                      ++.+|++.. .  .+|.|.||+. ...         .....++.++.+|+.|++++.+++++.       +.||+++|..
T Consensus        16 la~~La~~~-~--~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~   92 (181)
T PF08659_consen   16 LARWLAERG-A--RRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVL   92 (181)
T ss_dssp             HHHHHHHTT----SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-----
T ss_pred             HHHHHHHcC-C--CEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeee
Confidence            678888766 3  5899999882 110         011256889999999999999999764       5799999876


Q ss_pred             c
Q psy1304         137 T  137 (184)
Q Consensus       137 ~  137 (184)
                      .
T Consensus        93 ~   93 (181)
T PF08659_consen   93 A   93 (181)
T ss_dssp             -
T ss_pred             c
Confidence            4

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR03855 NAD_NadX aspartate dehydrogenase

Probab=90.90  E-value=0.59  Score=40.16  Aligned_cols=59  Identities=5%  Similarity=0.032  Sum_probs=42.5

Q ss_pred             HHHHh-hcCcEEEeccccccccchHHHHHHHHcCCC-EeeCCC---ChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMA-KKCRVILNCVGPYTWYGEAVVKACIEAKTH-HVDITG---EPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l-~~~dVVIN~aGPf~~~g~~VaeACieAGth-YVDltG---E~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++ .+.|+|+.|+++...  ..++..|+++|.| ++--.|   +.+..    .++-+.|++.|..++
T Consensus        30 ~~eLl~~~vDaVviatp~~~H--~e~a~~aL~aGkhVl~~s~gAlad~e~~----~~l~~aA~~~g~~l~   93 (229)
T TIGR03855        30 FDEFLPEDVDIVVEAASQEAV--KEYAEKILKNGKDLLIMSVGALADRELR----ERLREVARSSGRKVY   93 (229)
T ss_pred             HHHHhcCCCCEEEECCChHHH--HHHHHHHHHCCCCEEEECCcccCCHHHH----HHHHHHHHhcCCEEE
Confidence            44444 579999999987766  4899999999999 552223   33332    466778899988765

Members of this protein family are L-aspartate dehydrogenase, as shown for the NADP-dependent enzyme TM_1643 of Thermotoga maritima. Members lack homology to NadB, the aspartate oxidase (EC 1.4.3.16) of most mesophilic bacteria (described by TIGR00551), which this enzyme replaces in the generation of oxaloacetate from aspartate for the NAD biosynthetic pathway. All members of the seed alignment are found adjacent to other genes of NAD biosynthesis, although other uses of L-aspartate dehydrogenase may occur.

>PRK07069 short chain dehydrogenase; Validated

Probab=90.88  E-value=0.16  Score=41.06  Aligned_cols=60  Identities=12%  Similarity=0.020  Sum_probs=39.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeec-ccccc-------cCC--CCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGAR-DCLYR-------ENL--IDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr-~~lg~-------~~~--~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+ .....       ...  ....++++|+.|++++.++++       +.|+|||++|+.
T Consensus        15 ~a~~l~~~G----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   90 (251)
T PRK07069         15 IARRMAEQG----AKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVG   90 (251)
T ss_pred             HHHHHHHCC----CEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcC
Confidence            667777653    567777776 22110       010  112357899999999988776       469999999965


Q ss_pred             c
Q psy1304         137 T  137 (184)
Q Consensus       137 ~  137 (184)
                      .
T Consensus        91 ~   91 (251)
T PRK07069         91 S   91 (251)
T ss_pred             C
Confidence            3

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.66  E-value=0.29  Score=39.39  Aligned_cols=60  Identities=12%  Similarity=0.196  Sum_probs=39.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf~  137 (184)
                      ++..|++.  +  .++.+..|+.+...      ....++.++.+|+.|++++++++++       .|.+|+++|.+.
T Consensus        21 ~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~   93 (238)
T PRK05786         21 VAYFALKE--G--AQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYV   93 (238)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcC
Confidence            44444443  3  56667777554211      0113578899999999999887765       499999998653

>PRK07832 short chain dehydrogenase; Provisional

Probab=90.52  E-value=0.41  Score=39.90  Aligned_cols=59  Identities=14%  Similarity=0.000  Sum_probs=39.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------C-CCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------N-LIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~-~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+....       . .....+..+|+.|++++.++++.       .|+|||++|..
T Consensus        16 la~~la~~--G--~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~   89 (272)
T PRK07832         16 TALRLAAQ--G--AELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGIS   89 (272)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            56666654  3  567777775532110       0 01245578999999998887764       69999999965

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=90.49  E-value=0.36  Score=42.16  Aligned_cols=75  Identities=11%  Similarity=0.130  Sum_probs=46.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc---ccccc-------CCCCCCEEEEeCCCHHHHHHH
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD---CLYRE-------NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~---~lg~~-------~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      ++||+.-|-|-=--||.    ++.+|+....   -+|.+..|+.   +...+       ......+..+|++|.+++.+.
T Consensus       124 ~~~k~vlI~GAGGagrA----ia~~La~~G~---~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~  196 (289)
T PRK12548        124 VKGKKLTVIGAGGAATA----IQVQCALDGA---KEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAE  196 (289)
T ss_pred             cCCCEEEEECCcHHHHH----HHHHHHHCCC---CEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhh
Confidence            56777666663111222    4444554432   2488888874   22111       112345677899998899999


Q ss_pred             hhcCcEEEeccc
Q psy1304         123 AKKCRVILNCVG  134 (184)
Q Consensus       123 l~~~dVVIN~aG  134 (184)
                      ++.+|+||||..
T Consensus       197 ~~~~DilINaTp  208 (289)
T PRK12548        197 IASSDILVNATL  208 (289)
T ss_pred             hccCCEEEEeCC
Confidence            999999999983

>PRK12744 short chain dehydrogenase; Provisional

Probab=90.47  E-value=0.62  Score=38.29  Aligned_cols=31  Identities=19%  Similarity=0.285  Sum_probs=27.1

Q ss_pred             CCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304         105 DIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++.++++|+.|++++.++++       +.|++||++|.
T Consensus        62 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~   99 (257)
T PRK12744         62 KAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGK   99 (257)
T ss_pred             cEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcc
Confidence            57788999999999998876       47999999995

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.44  E-value=0.48  Score=38.14  Aligned_cols=56  Identities=9%  Similarity=0.046  Sum_probs=37.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCH-HHHHHHhhcCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNE-SSILIMAKKCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~-~sL~a~l~~~dVVIN~aGP  135 (184)
                      ++.+|++.  +  .++.+.+|+....  ...++.++.+|+.|+ +++.+.+.+.|+|||++|.
T Consensus        21 ia~~l~~~--G--~~v~~~~r~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~   77 (235)
T PRK06550         21 QARAFLAQ--G--AQVYGVDKQDKPD--LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI   77 (235)
T ss_pred             HHHHHHHC--C--CEEEEEeCCcccc--cCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence            55555544  3  5677777764321  124577899999987 5555555678999999994

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=90.44  E-value=0.8  Score=37.79  Aligned_cols=82  Identities=13%  Similarity=-0.016  Sum_probs=50.0

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|..                .+.+|.+..    .+|....|+..... ...  .....|..+ ..+...+.++
T Consensus         3 VtGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~-~~~--~~~~~~~~~-~~~~~~~~~~   58 (292)
T TIGR01777         3 ITGGTGFIGRA----------------LTQRLTKDG----HEVTILTRSPPAGA-NTK--WEGYKPWAP-LAESEALEGA   58 (292)
T ss_pred             EEcccchhhHH----------------HHHHHHHcC----CEEEEEeCCCCCCC-ccc--ceeeecccc-cchhhhcCCC
Confidence            56778888877                667777643    44555545443321 111  111223333 4566778899


Q ss_pred             cEEEecccccccc------------------chHHHHHHHHcCC
Q psy1304         127 RVILNCVGPYTWY------------------GEAVVKACIEAKT  152 (184)
Q Consensus       127 dVVIN~aGPf~~~------------------g~~VaeACieAGt  152 (184)
                      |+||||+|.....                  ...++++|.+.|+
T Consensus        59 D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~  102 (292)
T TIGR01777        59 DAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQ  102 (292)
T ss_pred             CEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCC
Confidence            9999999864210                  2688899999986

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK09242 tropinone reductase; Provisional

Probab=90.39  E-value=0.22  Score=40.91  Aligned_cols=76  Identities=11%  Similarity=0.127  Sum_probs=45.7

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------C--CCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------N--LIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~--~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ++||+.-|-|-   .++-...++..|++.  +  .++.+.+|+.+....       .  ..++.++.+|+.|++++.+++
T Consensus         7 ~~~k~~lItGa---~~gIG~~~a~~l~~~--G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (257)
T PRK09242          7 LDGQTALITGA---SKGIGLAIAREFLGL--G--ADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAIL   79 (257)
T ss_pred             cCCCEEEEeCC---CchHHHHHHHHHHHc--C--CEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence            45666655551   122111144444443  3  567777776532110       1  135678899999999988777


Q ss_pred             h-------cCcEEEecccc
Q psy1304         124 K-------KCRVILNCVGP  135 (184)
Q Consensus       124 ~-------~~dVVIN~aGP  135 (184)
                      +       +.|+|||++|.
T Consensus        80 ~~~~~~~g~id~li~~ag~   98 (257)
T PRK09242         80 DWVEDHWDGLHILVNNAGG   98 (257)
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            6       36999999985

>PRK07578 short chain dehydrogenase; Provisional

Probab=90.37  E-value=0.42  Score=37.85  Aligned_cols=29  Identities=17%  Similarity=0.313  Sum_probs=25.1

Q ss_pred             EEEEeCCCHHHHHHHhh---cCcEEEeccccc
Q psy1304         108 IIIADLKNESSILIMAK---KCRVILNCVGPY  136 (184)
Q Consensus       108 ~v~vDv~D~~sL~a~l~---~~dVVIN~aGPf  136 (184)
                      .+++|+.|+++++++++   +.|+|||++|..
T Consensus        35 ~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~   66 (199)
T PRK07578         35 DVQVDITDPASIRALFEKVGKVDAVVSAAGKV   66 (199)
T ss_pred             ceEecCCChHHHHHHHHhcCCCCEEEECCCCC
Confidence            57899999999999887   579999999853

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=90.35  E-value=1.2  Score=38.64  Aligned_cols=80  Identities=13%  Similarity=0.174  Sum_probs=57.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh--cCcEEEecccccccc-chHHHHHHHHc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK--KCRVILNCVGPYTWY-GEAVVKACIEA  150 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~-g~~VaeACieA  150 (184)
                      ++..|.+..-.  +-+.+++.-..   ......+.+.--..|.+++.++++  +.++||++.=||... ..++.++|.+.
T Consensus        17 la~~L~~~g~~--v~~Svat~~g~---~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~~is~~a~~ac~~~   91 (248)
T PRK08057         17 LARALAAAGVD--IVLSLAGRTGG---PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAAQISANAAAACRAL   91 (248)
T ss_pred             HHHHHHhCCCe--EEEEEccCCCC---cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHHHHHHHHHHHHHHh
Confidence            67777766433  55555554222   122345555555559999999998  589999999999754 58999999999


Q ss_pred             CCCEeeCC
Q psy1304         151 KTHHVDIT  158 (184)
Q Consensus       151 GthYVDlt  158 (184)
                      |+.|+-+-
T Consensus        92 ~ipyiR~e   99 (248)
T PRK08057         92 GIPYLRLE   99 (248)
T ss_pred             CCcEEEEe
Confidence            99998763

>PRK06484 short chain dehydrogenase; Validated

Probab=90.27  E-value=0.28  Score=44.83  Aligned_cols=75  Identities=17%  Similarity=0.095  Sum_probs=46.4

Q ss_pred             ccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhhc----
Q psy1304          54 RGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAKK----  125 (184)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~~----  125 (184)
                      +||+.-|-|-   ++|----++.+|++..    .++.+.+|+.....+    ...+..++++|+.|+++++++++.    
T Consensus         4 ~~k~~lITGa---s~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          4 QSRVVLVTGA---AGGIGRAACQRFARAG----DQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCeEEEEECC---CcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHH
Confidence            5666655551   1220111555555543    567777776532211    113466799999999999888764    


Q ss_pred             ---CcEEEecccc
Q psy1304         126 ---CRVILNCVGP  135 (184)
Q Consensus       126 ---~dVVIN~aGP  135 (184)
                         .|++||++|.
T Consensus        77 ~g~iD~li~nag~   89 (520)
T PRK06484         77 FGRIDVLVNNAGV   89 (520)
T ss_pred             hCCCCEEEECCCc
Confidence               7999999985

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=90.22  E-value=0.61  Score=42.15  Aligned_cols=92  Identities=10%  Similarity=0.048  Sum_probs=59.0

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhh-hCCCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHHHHHHh
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKA-DAPTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La-~~~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .|.+.+++.|+.                ..+-|+ +..|.  ..+.....++..|+.- ...   ...++.+.+.. + +
T Consensus         8 aIvGATG~vG~e----------------LlrlL~~~~hP~--~~l~~v~s~~~aG~~l~~~~---~~l~~~~~~~~-~-~   64 (336)
T PRK05671          8 AVVGATGTVGEA----------------LVQILEERDFPV--GTLHLLASSESAGHSVPFAG---KNLRVREVDSF-D-F   64 (336)
T ss_pred             EEEccCCHHHHH----------------HHHHHhhCCCCc--eEEEEEECcccCCCeeccCC---cceEEeeCChH-H-h
Confidence            368889999988                677888 34566  5554443333333211 122   22333332222 2 4


Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChH
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPY  162 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~  162 (184)
                      +++|+|+-|+++  .....++..+.++|+..||++++..
T Consensus        65 ~~vD~vFla~p~--~~s~~~v~~~~~~G~~VIDlS~~fR  101 (336)
T PRK05671         65 SQVQLAFFAAGA--AVSRSFAEKARAAGCSVIDLSGALP  101 (336)
T ss_pred             cCCCEEEEcCCH--HHHHHHHHHHHHCCCeEEECchhhc
Confidence            799999999863  4457799999999999999998753

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=90.18  E-value=0.33  Score=40.06  Aligned_cols=32  Identities=19%  Similarity=0.292  Sum_probs=27.3

Q ss_pred             CCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304         105 DIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.++++|+.|++++.++++       +.|++|||+|..
T Consensus        58 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~   96 (253)
T PRK08993         58 RFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLI   96 (253)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            46788999999999998887       479999999853

>PRK05599 hypothetical protein; Provisional

Probab=90.12  E-value=0.36  Score=39.94  Aligned_cols=51  Identities=10%  Similarity=0.055  Sum_probs=36.8

Q ss_pred             eeEEeeeeccccccc-------CC-CCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304          87 TRLGLLGARDCLYRE-------NL-IDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus        87 ~~iaLAGrr~~lg~~-------~~-~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      .++.+.+|+.+...+       .. ..+.++++|+.|+++++++++       +.|++||++|.+.
T Consensus        24 ~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~   89 (246)
T PRK05599         24 EDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILG   89 (246)
T ss_pred             CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCC
Confidence            788888886532211       11 236789999999999988765       3699999999763

>PRK07775 short chain dehydrogenase; Provisional

Probab=90.11  E-value=0.24  Score=41.55  Aligned_cols=59  Identities=15%  Similarity=0.071  Sum_probs=40.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+..|+.....+       ...++.++.+|+.|++++.++++       +.|+|||++|-.
T Consensus        26 la~~L~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~   98 (274)
T PRK07775         26 TAIELAAA--G--FPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDT   98 (274)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence            66677754  3  567676665422110       11356788899999999998887       469999999853

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.08  E-value=0.31  Score=39.51  Aligned_cols=32  Identities=13%  Similarity=0.092  Sum_probs=27.6

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhc--------CcEEEecccc
Q psy1304         104 IDIPIIIADLKNESSILIMAKK--------CRVILNCVGP  135 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~--------~dVVIN~aGP  135 (184)
                      .++.++++|+.|++++.+++++        .|++||++|.
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~   91 (253)
T PRK08642         52 DRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALA   91 (253)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCc
Confidence            3577899999999999988875        8999999974

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=90.07  E-value=0.33  Score=39.75  Aligned_cols=58  Identities=9%  Similarity=-0.011  Sum_probs=40.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGP  135 (184)
                      ++.+|++.  +  .++.+.+|+......       ...++.++.+|+.|++++.++++.       .|+|||++|.
T Consensus        25 ia~~L~~~--G--~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~   96 (254)
T PRK08085         25 LATGLAEY--G--AEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGI   96 (254)
T ss_pred             HHHHHHHc--C--CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence            55666654  3  577788876532111       113466788999999999988764       6999999984

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.05  E-value=0.3  Score=39.36  Aligned_cols=58  Identities=16%  Similarity=0.175  Sum_probs=38.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGP  135 (184)
                      ++.+|++.  +  .++.+..|+.....+       ...++.++++|+.|+++++++++.       .|+|||++|.
T Consensus        21 ~a~~l~~~--G--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~   92 (253)
T PRK08217         21 MAEYLAQK--G--AKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGI   92 (253)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            44555543  3  567777665432110       123567899999999998877764       5999999994

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=90.05  E-value=0.62  Score=41.92  Aligned_cols=90  Identities=14%  Similarity=0.048  Sum_probs=60.6

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhh-CCCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHHHHHHhh
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKAD-APTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~-~~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      |.+.+++.|+.                ++..|++ -.|.  .++.+..+++..|..- ....+....|++    ..+ ++
T Consensus         4 IvGAtG~vG~e----------------Li~lL~~~~hp~--~~l~~~as~~~~g~~~~~~~~~~~~~~~~----~~~-~~   60 (339)
T TIGR01296         4 IVGATGAVGQE----------------MLKILEERNFPI--DKLVLLASDRSAGRKVTFKGKELEVNEAK----IES-FE   60 (339)
T ss_pred             EEcCCCHHHHH----------------HHHHHHhCCCCh--hhEEEEeccccCCCeeeeCCeeEEEEeCC----hHH-hc
Confidence            56677888887                7788874 3566  6666555554443311 123456666664    122 47


Q ss_pred             cCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         125 KCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       125 ~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      ++|+|+-|+|..  ....++...+++|+.-||++++.
T Consensus        61 ~~D~v~~a~g~~--~s~~~a~~~~~~G~~VID~ss~~   95 (339)
T TIGR01296        61 GIDIALFSAGGS--VSKEFAPKAAKCGAIVIDNTSAF   95 (339)
T ss_pred             CCCEEEECCCHH--HHHHHHHHHHHCCCEEEECCHHH
Confidence            999999999755  34677888889999999999754

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=90.03  E-value=0.27  Score=40.37  Aligned_cols=58  Identities=24%  Similarity=0.244  Sum_probs=38.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++.+|++..    .++.+.+|+....+.       ...++.++.+|+.|++++.++++       ..|+|||++|-
T Consensus        28 la~~l~~~G----~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~   99 (259)
T PRK08213         28 IAEALGEAG----ARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGA   99 (259)
T ss_pred             HHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence            455555533    467777775432110       11356789999999999977765       47999999984

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=89.97  E-value=0.55  Score=39.32  Aligned_cols=79  Identities=13%  Similarity=0.034  Sum_probs=46.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc---cccc---cCCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD---CLYR---ENLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~---~lg~---~~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      +.||+.-|.|     -+++..|-.++|+..-..-.++.+.+|.+   +...   ...+...++.+|+.|+++++++++  
T Consensus         4 l~~k~vlItG-----as~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   78 (260)
T PRK06997          4 LAGKRILITG-----LLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASL   78 (260)
T ss_pred             cCCcEEEEeC-----CCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHH
Confidence            5677776665     11223355566632221116677765421   1100   011233478899999999998875  


Q ss_pred             -----cCcEEEeccccc
Q psy1304         125 -----KCRVILNCVGPY  136 (184)
Q Consensus       125 -----~~dVVIN~aGPf  136 (184)
                           +.|++||++|-.
T Consensus        79 ~~~~g~iD~lvnnAG~~   95 (260)
T PRK06997         79 GQHWDGLDGLVHSIGFA   95 (260)
T ss_pred             HHHhCCCcEEEEccccC
Confidence                 379999999854

>PLN02996 fatty acyl-CoA reductase

Probab=89.96  E-value=0.88  Score=42.70  Aligned_cols=47  Identities=11%  Similarity=0.104  Sum_probs=35.6

Q ss_pred             CCCCEEEEeCC-------CHHHHHHHhhcCcEEEeccccccccc-------------hHHHHHHHHc
Q psy1304         104 IDIPIIIADLK-------NESSILIMAKKCRVILNCVGPYTWYG-------------EAVVKACIEA  150 (184)
Q Consensus       104 ~~v~~v~vDv~-------D~~sL~a~l~~~dVVIN~aGPf~~~g-------------~~VaeACieA  150 (184)
                      .++.++..|+.       |.+.++.+++++|+|||||+......             ..++++|.+.
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~  150 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKC  150 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            45788889987       55667889999999999998643111             5678888875

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=89.96  E-value=0.41  Score=41.62  Aligned_cols=85  Identities=7%  Similarity=-0.014  Sum_probs=54.8

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~  120 (184)
                      |.+.++|-|.-                ++..|++..-    +|....|+......      ...++.++.+|+.|++++.
T Consensus         9 ItGatG~IG~~----------------l~~~L~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   68 (349)
T TIGR02622         9 VTGHTGFKGSW----------------LSLWLLELGA----EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLR   68 (349)
T ss_pred             EECCCChhHHH----------------HHHHHHHCCC----EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHH
Confidence            45666676665                6667776543    34334454321110      1124678899999999999


Q ss_pred             HHhhc--CcEEEeccccccc----------------cchHHHHHHHHcC
Q psy1304         121 IMAKK--CRVILNCVGPYTW----------------YGEAVVKACIEAK  151 (184)
Q Consensus       121 a~l~~--~dVVIN~aGPf~~----------------~g~~VaeACieAG  151 (184)
                      +++++  .|+||||+|....                ....++++|.+.+
T Consensus        69 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~  117 (349)
T TIGR02622        69 KAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG  117 (349)
T ss_pred             HHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC
Confidence            99996  5999999984211                0157788888876

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02206 UDP-glucuronate decarboxylase

Probab=89.94  E-value=0.56  Score=43.40  Aligned_cols=50  Identities=8%  Similarity=0.084  Sum_probs=35.6

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhcCcEEEecccccc----cc------------chHHHHHHHHcCCCEeeCC
Q psy1304         104 IDIPIIIADLKNESSILIMAKKCRVILNCVGPYT----WY------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~----~~------------g~~VaeACieAGthYVDlt  158 (184)
                      .+++++..|+.++     ++.++|+|||||++..    ..            ..+++++|.++|+++|-++
T Consensus       167 ~~~~~i~~D~~~~-----~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~S  232 (442)
T PLN02206        167 PNFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  232 (442)
T ss_pred             CceEEEECCccCh-----hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEC
Confidence            3466777777654     3468999999998432    10            1678999999999877554

>PRK07060 short chain dehydrogenase; Provisional

Probab=89.74  E-value=0.41  Score=38.58  Aligned_cols=77  Identities=14%  Similarity=0.179  Sum_probs=47.1

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--CCCCCCEEEEeCCCHHHHHHHhhc---Cc
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--NLIDIPIIIADLKNESSILIMAKK---CR  127 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--~~~~v~~v~vDv~D~~sL~a~l~~---~d  127 (184)
                      ++||++-|-|-   +.+--..++.+|++.  +  .++.+.+|+.+....  ......++.+|+.|++++.++++.   .|
T Consensus         7 ~~~~~~lItGa---~g~iG~~~a~~l~~~--g--~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d   79 (245)
T PRK07060          7 FSGKSVLVTGA---SSGIGRACAVALAQR--G--ARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFD   79 (245)
T ss_pred             cCCCEEEEeCC---cchHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCC
Confidence            55666655541   011111255555554  3  467777776532211  112467889999999999998874   79


Q ss_pred             EEEeccccc
Q psy1304         128 VILNCVGPY  136 (184)
Q Consensus       128 VVIN~aGPf  136 (184)
                      +|||++|..
T Consensus        80 ~vi~~ag~~   88 (245)
T PRK07060         80 GLVNCAGIA   88 (245)
T ss_pred             EEEECCCCC
Confidence            999999854

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=89.50  E-value=0.33  Score=41.78  Aligned_cols=79  Identities=9%  Similarity=0.036  Sum_probs=48.9

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc-ccc-------cCCCCCCEEEEeCCCHHHHHHH
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC-LYR-------ENLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~-lg~-------~~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      ..|+||+.-|.|-   ++|--.-++.+|++..    .++.+.+++.. ...       ....++.++.+|+.|++++.++
T Consensus         8 ~~l~~k~~lVTGa---s~gIG~~ia~~L~~~G----a~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~   80 (306)
T PRK07792          8 TDLSGKVAVVTGA---AAGLGRAEALGLARLG----ATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADEL   80 (306)
T ss_pred             cCCCCCEEEEECC---CChHHHHHHHHHHHCC----CEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            3467777777662   2221122555555543    56666665321 100       0113567899999999999988


Q ss_pred             hh------cCcEEEeccccc
Q psy1304         123 AK------KCRVILNCVGPY  136 (184)
Q Consensus       123 l~------~~dVVIN~aGPf  136 (184)
                      ++      +.|+|||++|-.
T Consensus        81 ~~~~~~~g~iD~li~nAG~~  100 (306)
T PRK07792         81 VATAVGLGGLDIVVNNAGIT  100 (306)
T ss_pred             HHHHHHhCCCCEEEECCCCC
Confidence            86      479999999954

>PRK12742 oxidoreductase; Provisional

Probab=89.49  E-value=0.47  Score=38.14  Aligned_cols=78  Identities=12%  Similarity=0.125  Sum_probs=44.9

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc-ccccc--CCCCCCEEEEeCCCHHHHHHHhhc---
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD-CLYRE--NLIDIPIIIADLKNESSILIMAKK---  125 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~-~lg~~--~~~~v~~v~vDv~D~~sL~a~l~~---  125 (184)
                      .++||++-|-|-   ..+---.++.+|++.  +  .++.+.++++ +...+  ......++.+|+.|.+++.++++.   
T Consensus         3 ~~~~k~vlItGa---sggIG~~~a~~l~~~--G--~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (237)
T PRK12742          3 AFTGKKVLVLGG---SRGIGAAIVRRFVTD--G--ANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGA   75 (237)
T ss_pred             CCCCCEEEEECC---CChHHHHHHHHHHHC--C--CEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCC
Confidence            356777666651   112011144444443  3  4566655432 11110  012356888999999999888865   


Q ss_pred             CcEEEeccccc
Q psy1304         126 CRVILNCVGPY  136 (184)
Q Consensus       126 ~dVVIN~aGPf  136 (184)
                      .|++||++|..
T Consensus        76 id~li~~ag~~   86 (237)
T PRK12742         76 LDILVVNAGIA   86 (237)
T ss_pred             CcEEEECCCCC
Confidence            79999999854

>PRK07904 short chain dehydrogenase; Provisional

Probab=89.44  E-value=0.77  Score=38.27  Aligned_cols=50  Identities=16%  Similarity=0.088  Sum_probs=34.7

Q ss_pred             eeEEeeeeccccc-c-------c-CCCCCCEEEEeCCCHHHHHHHhh------cCcEEEeccccc
Q psy1304          87 TRLGLLGARDCLY-R-------E-NLIDIPIIIADLKNESSILIMAK------KCRVILNCVGPY  136 (184)
Q Consensus        87 ~~iaLAGrr~~lg-~-------~-~~~~v~~v~vDv~D~~sL~a~l~------~~dVVIN~aGPf  136 (184)
                      .++.+.+|+.... .       . ...++.++.+|+.|++++.++++      +.|++||++|-+
T Consensus        34 ~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~   98 (253)
T PRK07904         34 ARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDVDVAIVAFGLL   98 (253)
T ss_pred             CeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCCCEEEEeeecC
Confidence            4677777765420 0       0 01257899999999998766654      689999999865

>PRK07791 short chain dehydrogenase; Provisional

Probab=89.37  E-value=0.46  Score=40.45  Aligned_cols=33  Identities=12%  Similarity=0.075  Sum_probs=27.0

Q ss_pred             CCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304         105 DIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      ++.++.+|+.|++++.++++       +.|++||++|.+.
T Consensus        65 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~  104 (286)
T PRK07791         65 EAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILR  104 (286)
T ss_pred             ceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            45688899999999988775       3699999999653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=89.35  E-value=0.39  Score=38.59  Aligned_cols=59  Identities=17%  Similarity=0.180  Sum_probs=39.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc----cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR----ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~----~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+...    ....++.++.+|+.|.+++.++++       +.|+||||+|..
T Consensus        22 la~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   91 (245)
T PRK12936         22 IARLLHAQG----AIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGIT   91 (245)
T ss_pred             HHHHHHHCC----CEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            556666543    35666665542111    011357788999999999988865       479999999953

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=89.22  E-value=0.23  Score=36.90  Aligned_cols=32  Identities=9%  Similarity=0.347  Sum_probs=26.7

Q ss_pred             CCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304         105 DIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.++.+|+.+++++++++..       .|.|||++|+.
T Consensus        54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~   92 (180)
T smart00822       54 EVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVL   92 (180)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccC
Confidence            456788999999999988765       49999999854

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1430|consensus

Probab=89.02  E-value=1.1  Score=41.26  Aligned_cols=89  Identities=18%  Similarity=0.195  Sum_probs=61.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc---cccc----CCCCCCEEEEeCCCHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC---LYRE----NLIDIPIIIADLKNESSI  119 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~---lg~~----~~~~v~~v~vDv~D~~sL  119 (184)
                      |.+-++|=|+-                ++.+|.+..+.  ..|-++-....   ...+    .-..++..++|+.|...+
T Consensus         9 VtGG~GflG~h----------------lv~~L~~~~~~--~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i   70 (361)
T KOG1430|consen    9 VTGGSGFLGQH----------------LVQALLENELK--LEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSI   70 (361)
T ss_pred             EECCccHHHHH----------------HHHHHHhcccc--cEEEEeccCccccccchhhhcccCCceeEEecchhhhhhh
Confidence            34556677766                66777766654  55555442211   0000    126688999999999999


Q ss_pred             HHHhhcCcEEEeccccccccc---------------hHHHHHHHHcCCC
Q psy1304         120 LIMAKKCRVILNCVGPYTWYG---------------EAVVKACIEAKTH  153 (184)
Q Consensus       120 ~a~l~~~dVVIN~aGPf~~~g---------------~~VaeACieAGth  153 (184)
                      ...+.++-||..+++|.....               ..++++|.++|+.
T Consensus        71 ~~a~~~~~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~  119 (361)
T KOG1430|consen   71 SNAFQGAVVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVK  119 (361)
T ss_pred             hhhccCceEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCC
Confidence            999999966666677765443               6899999999998

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=88.84  E-value=0.64  Score=37.26  Aligned_cols=33  Identities=18%  Similarity=0.214  Sum_probs=27.7

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304         104 IDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      .++.++.+|+.|++++.++++       ..|+|||++|..
T Consensus        50 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~   89 (242)
T TIGR01829        50 FDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGIT   89 (242)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCC
Confidence            457799999999999988776       379999999854

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=88.70  E-value=0.82  Score=42.28  Aligned_cols=49  Identities=8%  Similarity=0.091  Sum_probs=34.8

Q ss_pred             CCCEEEEeCCCHHHHHHHhhcCcEEEecccccc---c---------c----chHHHHHHHHcCCCEeeCC
Q psy1304         105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYT---W---------Y----GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~---~---------~----g~~VaeACieAGthYVDlt  158 (184)
                      +++++..|+.+.     .+.++|+|||||++..   .         .    ..+++++|.+.|+++|-++
T Consensus       169 ~~~~~~~Di~~~-----~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~S  233 (436)
T PLN02166        169 RFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTS  233 (436)
T ss_pred             ceEEEECccccc-----cccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEC
Confidence            456677777553     4578999999998432   1         0    1689999999998877554

>PRK06940 short chain dehydrogenase; Provisional

Probab=88.61  E-value=0.58  Score=39.50  Aligned_cols=61  Identities=11%  Similarity=0.064  Sum_probs=41.3

Q ss_pred             hhhhhhhCC-CCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh------cCcEEEeccccc
Q psy1304          74 PSAYKADAP-TSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~-~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~------~~dVVIN~aGPf  136 (184)
                      |-.++++.. .+  .++.+.+|+.+....       ...++.++.+|+.|++++.++++      ..|++||++|.+
T Consensus        13 IG~~la~~l~~G--~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li~nAG~~   87 (275)
T PRK06940         13 IGQAIARRVGAG--KKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAGVS   87 (275)
T ss_pred             HHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence            445555222 34  688888876432111       11346789999999999998886      479999999954

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=88.59  E-value=1.5  Score=32.00  Aligned_cols=93  Identities=13%  Similarity=0.103  Sum_probs=58.4

Q ss_pred             hhhhhCCCCCceeE-EeeeecccccccCC--CCCCEEEEeCCCHHHHHHHhh--cCcEEEeccccccccchHHHHHHHHc
Q psy1304          76 AYKADAPTSNLTRL-GLLGARDCLYRENL--IDIPIIIADLKNESSILIMAK--KCRVILNCVGPYTWYGEAVVKACIEA  150 (184)
Q Consensus        76 ~~La~~~~~~~~~i-aLAGrr~~lg~~~~--~~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieA  150 (184)
                      .++.+..|+  .++ ++..++.+......  -.++  ..  +|   ++++++  +.|+|+-|..+...  ..++..|+++
T Consensus        17 ~~~~~~~~~--~~v~~v~d~~~~~~~~~~~~~~~~--~~--~~---~~~ll~~~~~D~V~I~tp~~~h--~~~~~~~l~~   85 (120)
T PF01408_consen   17 RALLRSSPD--FEVVAVCDPDPERAEAFAEKYGIP--VY--TD---LEELLADEDVDAVIIATPPSSH--AEIAKKALEA   85 (120)
T ss_dssp             HHHHHTTTT--EEEEEEECSSHHHHHHHHHHTTSE--EE--SS---HHHHHHHTTESEEEEESSGGGH--HHHHHHHHHT
T ss_pred             HHHHhcCCC--cEEEEEEeCCHHHHHHHHHHhccc--ch--hH---HHHHHHhhcCCEEEEecCCcch--HHHHHHHHHc
Confidence            445567677  665 35555443222111  2233  22  22   667777  79999999866544  5999999999


Q ss_pred             CCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         151 KTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       151 Gth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      |.| +++  ++-+.+   +. +++-+.|+++|+.++
T Consensus        86 g~~v~~EKP~~~~~~---~~-~~l~~~a~~~~~~~~  117 (120)
T PF01408_consen   86 GKHVLVEKPLALTLE---EA-EELVEAAKEKGVKVM  117 (120)
T ss_dssp             TSEEEEESSSSSSHH---HH-HHHHHHHHHHTSCEE
T ss_pred             CCEEEEEcCCcCCHH---HH-HHHHHHHHHhCCEEE
Confidence            999 777  344333   43 567778888887764

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK12827 short chain dehydrogenase; Provisional

Probab=88.56  E-value=0.56  Score=37.67  Aligned_cols=34  Identities=12%  Similarity=0.079  Sum_probs=28.8

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304         104 IDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      .++.++.+|+.|++++.++++       +.|.|||++|+..
T Consensus        59 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~   99 (249)
T PRK12827         59 GKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIAT   99 (249)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            457789999999999998875       5899999999754

>PRK12743 oxidoreductase; Provisional

Probab=88.53  E-value=0.53  Score=38.77  Aligned_cols=59  Identities=17%  Similarity=0.075  Sum_probs=39.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccc-ccc-------cCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDC-LYR-------ENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~-lg~-------~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+..++.. ...       ....++.++.+|+.|+++++++++.       .|+||+++|..
T Consensus        18 ~a~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~   91 (256)
T PRK12743         18 CALLLAQQG----FDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAM   91 (256)
T ss_pred             HHHHHHHCC----CEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            566666543    56666654331 110       0114578999999999998888763       69999999964

>PRK06349 homoserine dehydrogenase; Provisional

Probab=88.06  E-value=1.6  Score=40.32  Aligned_cols=61  Identities=16%  Similarity=0.164  Sum_probs=45.5

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      +++++.  +.|+||.|.|+. ......+++|+++|.|-|  |.+.........++.+.|+++|+.+
T Consensus        64 ~~~ll~d~~iDvVve~tg~~-~~~~~~~~~aL~~GkhVV--taNK~~~a~~~~eL~~lA~~~gv~l  126 (426)
T PRK06349         64 PEELVNDPDIDIVVELMGGI-EPARELILKALEAGKHVV--TANKALLAVHGAELFAAAEEKGVDL  126 (426)
T ss_pred             HHHHhhCCCCCEEEECCCCc-hHHHHHHHHHHHCCCeEE--EcCHHHHHHHHHHHHHHHHHcCCcE
Confidence            456665  479999999876 345789999999999987  4444333333478999999999865

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=87.99  E-value=0.64  Score=37.66  Aligned_cols=32  Identities=16%  Similarity=0.084  Sum_probs=26.8

Q ss_pred             CCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304         105 DIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..+.+|+.|.+++.++++       +.|+||||+|..
T Consensus        54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~   92 (246)
T PRK12938         54 DFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGIT   92 (246)
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            45677899999999988876       479999999964

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=87.89  E-value=0.46  Score=38.89  Aligned_cols=61  Identities=15%  Similarity=0.139  Sum_probs=42.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhh--------cCcEEEeccccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAK--------KCRVILNCVGPYTW  138 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~--------~~dVVIN~aGPf~~  138 (184)
                      ++.+|++..    .++.+.+|+.+....      .....+++.+|+.|+++++++++        +.|++||++|....
T Consensus        12 ia~~l~~~G----a~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~   86 (241)
T PF13561_consen   12 IARALAEEG----ANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPP   86 (241)
T ss_dssp             HHHHHHHTT----EEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTG
T ss_pred             HHHHHHHCC----CEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEeccccccc
Confidence            444455444    889999987653100      00224579999999999998854        46999999987654

...

>PLN00015 protochlorophyllide reductase

Probab=87.89  E-value=0.67  Score=39.85  Aligned_cols=60  Identities=10%  Similarity=0.001  Sum_probs=40.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++...   -++.+.+|+.+....       ...++.++.+|+.|.++++++++       ..|++||++|.+
T Consensus        13 ia~~l~~~G~---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~   86 (308)
T PLN00015         13 TAKALAETGK---WHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVY   86 (308)
T ss_pred             HHHHHHHCCC---CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcC
Confidence            5556665541   356777776532211       11356788999999999988875       369999999954

>PRK13301 putative L-aspartate dehydrogenase; Provisional

Probab=87.84  E-value=2.3  Score=37.86  Aligned_cols=59  Identities=10%  Similarity=0.156  Sum_probs=42.3

Q ss_pred             HHHHH-hhcCcEEEeccccccccchHHHHHHHHcCCCEeeCC-C---ChHHHHHHHHHhHHHHHHcCCee
Q psy1304         118 SILIM-AKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDIT-G---EPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       118 sL~a~-l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDlt-G---E~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      +++++ ...+|+||.||||-..  ....+.++++|+|++=++ |   |..+.    .++.+.|++.|..+
T Consensus        54 ~l~~ll~~~~DlVVE~A~~~av--~e~~~~iL~~g~dlvv~SvGALaD~~~~----~~l~~~A~~~g~~i  117 (267)
T PRK13301         54 GLPGLLAWRPDLVVEAAGQQAI--AEHAEGCLTAGLDMIICSAGALADDALR----ARLIAAAEAGGARI  117 (267)
T ss_pred             CHHHHhhcCCCEEEECCCHHHH--HHHHHHHHhcCCCEEEEChhHhcCHHHH----HHHHHHHHhCCCEE
Confidence            36665 5779999999987644  477788999999987766 3   44444    35667788877544

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=87.67  E-value=1.1  Score=36.29  Aligned_cols=31  Identities=19%  Similarity=0.260  Sum_probs=26.3

Q ss_pred             CCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304         105 DIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      +..++.+|+.|++++..+++       +.|+|||++|.
T Consensus        57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~   94 (252)
T PRK06077         57 EGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGL   94 (252)
T ss_pred             eeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            45688899999999988877       46999999983

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=87.62  E-value=0.91  Score=36.69  Aligned_cols=59  Identities=15%  Similarity=0.093  Sum_probs=39.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+..|+.+...       ....++.++++|+.|++++.++++       +.|+||+++|..
T Consensus        17 l~~~l~~~--g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~   89 (255)
T TIGR01963        17 IALALAAA--G--ANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQ   89 (255)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            56666654  3  46667777543211       011457789999999997766554       469999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06924 short chain dehydrogenase; Provisional

Probab=87.55  E-value=0.57  Score=38.09  Aligned_cols=58  Identities=9%  Similarity=0.011  Sum_probs=38.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc-----ccCCCCCCEEEEeCCCHHHHHHHhhcCc-----------EEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY-----RENLIDIPIIIADLKNESSILIMAKKCR-----------VILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg-----~~~~~~v~~v~vDv~D~~sL~a~l~~~d-----------VVIN~aGP  135 (184)
                      ++.+|++..    .++.+.+|+....     .....++.++.+|+.|+++++++++.+.           .+|+++|-
T Consensus        17 ia~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~   90 (251)
T PRK06924         17 IANQLLEKG----THVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGM   90 (251)
T ss_pred             HHHHHHhcC----CEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEccee
Confidence            666666543    4566777764211     1112457789999999999998887531           68888774

>PRK08703 short chain dehydrogenase; Provisional

Probab=87.51  E-value=1.7  Score=35.23  Aligned_cols=58  Identities=21%  Similarity=0.136  Sum_probs=35.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCC--HHHHHHHh--------hcCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKN--ESSILIMA--------KKCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D--~~sL~a~l--------~~~dVVIN~aGP  135 (184)
                      ++.+|++.  +  .++.+.+|+......        ......++.+|+.|  .+++..++        ...|+||||+|.
T Consensus        22 la~~l~~~--g--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~   97 (239)
T PRK08703         22 VAKAYAAA--G--ATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGY   97 (239)
T ss_pred             HHHHHHHc--C--CEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccc
Confidence            44555543  3  678888876632110        11346678899865  44555443        357999999995

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=87.44  E-value=0.76  Score=36.90  Aligned_cols=58  Identities=7%  Similarity=-0.039  Sum_probs=38.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccc-----ccc---cCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDC-----LYR---ENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~-----lg~---~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGP  135 (184)
                      ++.+|++..    .++.+..|+..     ...   ....++.++.+|+.|++++.+++++       .|+|||++|-
T Consensus        18 la~~l~~~g----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~   90 (245)
T PRK12824         18 IARELLNDG----YRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGI   90 (245)
T ss_pred             HHHHHHHcC----CEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            555565543    45666666531     000   0113578999999999999888764       7999999983

>TIGR01921 DAP-DH diaminopimelate dehydrogenase

Probab=87.42  E-value=1.3  Score=40.36  Aligned_cols=61  Identities=13%  Similarity=0.045  Sum_probs=43.8

Q ss_pred             HHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHH--HHHHHHhHHHHHHc-CCeee
Q psy1304         119 ILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFM--EYMQYEYNTRAQES-EVQKC  183 (184)
Q Consensus       119 L~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~--~~ii~~lhe~Akaa-GV~Iv  183 (184)
                      ...++.+.|+|+-|.++...  .+.+..|+++|.|-||... + +.  .+....+++.|++. |+.++
T Consensus        54 ~~e~l~~iDVViIctPs~th--~~~~~~~L~aG~NVV~s~~-~-h~~~p~~~~~ld~AAk~~g~vsvi  117 (324)
T TIGR01921        54 DEKHLDDVDVLILCMGSATD--IPEQAPYFAQFANTVDSFD-N-HRDIPRHRQVMDAAAKAAGNVSVI  117 (324)
T ss_pred             HHHhccCCCEEEEcCCCccC--HHHHHHHHHcCCCEEECCC-c-ccCCHHHHHHHHHHHHHcCCEEEE
Confidence            34456889999999755444  6888899999999999964 2 22  23346788888875 56654

This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.

>PRK06953 short chain dehydrogenase; Provisional

Probab=87.38  E-value=0.76  Score=37.02  Aligned_cols=59  Identities=10%  Similarity=0.013  Sum_probs=40.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHHHHHHhh-----cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESSILIMAK-----KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~sL~a~l~-----~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+..++. ....+++.+|+.|.+++++++.     ..|+|||++|.+
T Consensus        17 la~~L~~~--G--~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~   81 (222)
T PRK06953         17 FVRQYRAD--G--WRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVY   81 (222)
T ss_pred             HHHHHHhC--C--CEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcc
Confidence            55566543  4  6777777765322110 1245789999999999998753     379999999986

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=87.32  E-value=2.2  Score=38.72  Aligned_cols=90  Identities=16%  Similarity=0.064  Sum_probs=56.0

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhh-CCCCCceeEE-eeeeccccccc-CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKAD-APTSNLTRLG-LLGARDCLYRE-NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~-~~~~~~~~ia-LAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      |.+.+++.|+.                +..-|+. -.|.  ..+. +++.+. .|.. .....+...-++ +++    .+
T Consensus        12 VvGAtG~vG~e----------------LlrlL~~~~hP~--~~l~~las~rs-aGk~~~~~~~~~~v~~~-~~~----~~   67 (344)
T PLN02383         12 IVGVTGAVGQE----------------FLSVLTDRDFPY--SSLKMLASARS-AGKKVTFEGRDYTVEEL-TED----SF   67 (344)
T ss_pred             EEcCCChHHHH----------------HHHHHHhCCCCc--ceEEEEEccCC-CCCeeeecCceeEEEeC-CHH----HH
Confidence            68889999988                6677774 3565  4553 344332 2211 112233333333 222    24


Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChH
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPY  162 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~  162 (184)
                      +++|+|+-|+|-  .....++..+.++|+..||++++..
T Consensus        68 ~~~D~vf~a~p~--~~s~~~~~~~~~~g~~VIDlS~~fR  104 (344)
T PLN02383         68 DGVDIALFSAGG--SISKKFGPIAVDKGAVVVDNSSAFR  104 (344)
T ss_pred             cCCCEEEECCCc--HHHHHHHHHHHhCCCEEEECCchhh
Confidence            789999999862  3456777778889999999998653

>PRK07035 short chain dehydrogenase; Provisional

Probab=87.23  E-value=0.54  Score=38.35  Aligned_cols=58  Identities=5%  Similarity=-0.047  Sum_probs=38.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGP  135 (184)
                      ++.+|++.  +  -++.+.+|+.....       +...+..++++|+.|.+++++++++       .|+|||++|.
T Consensus        24 l~~~l~~~--G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~   95 (252)
T PRK07035         24 IAKLLAQQ--G--AHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAA   95 (252)
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            44555544  3  46777777543111       0113467889999999999887764       7999999983

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=86.99  E-value=2  Score=38.19  Aligned_cols=65  Identities=12%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             EeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc--CcEEEeccccccc-cchHHHHHHHHcCCCEeeC
Q psy1304          90 GLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK--CRVILNCVGPYTW-YGEAVVKACIEAKTHHVDI  157 (184)
Q Consensus        90 aLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~-~g~~VaeACieAGthYVDl  157 (184)
                      .++|+-..+..   ...+.+.+---+.+.|.++++.  .|+||++.=||.. ...+.+++|-++|+.|+=+
T Consensus        32 s~t~~g~~l~~---~~~~~~~~G~l~~e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~gipy~r~   99 (257)
T COG2099          32 SLTGYGAKLAE---QIGPVRVGGFLGAEGLAAFLREEGIDLLIDATHPYAARISQNAARAAKETGIPYLRL   99 (257)
T ss_pred             Ecccccccchh---ccCCeeecCcCCHHHHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEE
Confidence            34444444433   3344666677789999999985  8999999999964 5699999999999999754

>TIGR03450 mycothiol_INO1 inositol 1-phosphate synthase, Actinobacterial type

Probab=86.64  E-value=1.6  Score=40.31  Aligned_cols=64  Identities=14%  Similarity=0.183  Sum_probs=45.0

Q ss_pred             HHHHHHHhhc--CcEEEeccccccc--cchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         116 ESSILIMAKK--CRVILNCVGPYTW--YGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       116 ~~sL~a~l~~--~dVVIN~aGPf~~--~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++.+.+.++.  +||+||-. |--.  ...-=+.||+++||.||..+-.  ++-.. .+|.++++++|++++
T Consensus       112 ~~dv~~~lk~~~~dVlvnyl-PvGs~~A~~~YA~AAl~aG~afVN~~P~--~ia~~-p~~a~~f~e~glPi~  179 (351)
T TIGR03450       112 PVDVVQALKDAKVDVLVSYL-PVGSEEADKFYAQCAIDAGVAFVNALPV--FIASD-PEWAKKFTDAGVPIV  179 (351)
T ss_pred             HHHHHHHHHhcCCCEEEECC-ccchHHHHHHHHHHHHHcCCceEeccCc--cccCC-HHHHHHHHHCCCCEe
Confidence            3456666765  89999965 3321  1245577999999999987643  33343 578889999999875

This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.

>PRK06128 oxidoreductase; Provisional

Probab=86.56  E-value=1.1  Score=38.16  Aligned_cols=77  Identities=13%  Similarity=0.110  Sum_probs=46.3

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc---------ccCCCCCCEEEEeCCCHHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY---------RENLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg---------~~~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      .++||+.-|-|-   .+|----++.+|++..    .++.+..++++..         .....+..++.+|+.|+++++++
T Consensus        52 ~l~~k~vlITGa---s~gIG~~~a~~l~~~G----~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~  124 (300)
T PRK06128         52 RLQGRKALITGA---DSGIGRATAIAFAREG----ADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQL  124 (300)
T ss_pred             ccCCCEEEEecC---CCcHHHHHHHHHHHcC----CEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence            466777777762   1221112444555443    4566655432110         00113466889999999999888


Q ss_pred             hh-------cCcEEEecccc
Q psy1304         123 AK-------KCRVILNCVGP  135 (184)
Q Consensus       123 l~-------~~dVVIN~aGP  135 (184)
                      ++       +.|+|||++|.
T Consensus       125 ~~~~~~~~g~iD~lV~nAg~  144 (300)
T PRK06128        125 VERAVKELGGLDILVNIAGK  144 (300)
T ss_pred             HHHHHHHhCCCCEEEECCcc
Confidence            76       46999999995

>KOG1200|consensus

Probab=86.56  E-value=0.7  Score=40.57  Aligned_cols=60  Identities=13%  Similarity=0.161  Sum_probs=40.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC------CCCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN------LIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~------~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf~  137 (184)
                      |+-.||+..    .|++.+-++..-.++.      -.+...+.||+.++.++..++++       .+++|||+|--.
T Consensus        30 ia~~la~~G----arv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItr  102 (256)
T KOG1200|consen   30 IAQLLAKKG----ARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITR  102 (256)
T ss_pred             HHHHHHhcC----cEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCcccc
Confidence            444444544    6777777655322111      14567899999999988886653       799999999653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=86.53  E-value=0.53  Score=40.80  Aligned_cols=60  Identities=10%  Similarity=-0.027  Sum_probs=40.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++..+   .++.+.+|+.....+       ...++.++.+|+.|.++++++++       +.|++||++|.+
T Consensus        19 ia~~L~~~G~---~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~   92 (314)
T TIGR01289        19 AAKALAATGE---WHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVY   92 (314)
T ss_pred             HHHHHHHcCC---CEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcc
Confidence            5555555441   367777776542211       11346788899999999988875       379999999954

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06720 hypothetical protein; Provisional

Probab=86.52  E-value=1.1  Score=36.29  Aligned_cols=78  Identities=10%  Similarity=0.109  Sum_probs=48.0

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      ++||..-|.|-   ++|-..-++.+|++..    .++.+.+++.....       .......++.+|+.|++++.++++ 
T Consensus        14 l~gk~~lVTGa---~~GIG~aia~~l~~~G----~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~   86 (169)
T PRK06720         14 LAGKVAIVTGG---GIGIGRNTALLLAKQG----AKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISI   86 (169)
T ss_pred             cCCCEEEEecC---CChHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            56777766662   1221112455555443    56777776543111       011345678999999999888663 


Q ss_pred             ------cCcEEEecccccc
Q psy1304         125 ------KCRVILNCVGPYT  137 (184)
Q Consensus       125 ------~~dVVIN~aGPf~  137 (184)
                            +.|++||++|-+.
T Consensus        87 ~~~~~G~iDilVnnAG~~~  105 (169)
T PRK06720         87 TLNAFSRIDMLFQNAGLYK  105 (169)
T ss_pred             HHHHcCCCCEEEECCCcCC
Confidence                  5899999998543

>PRK08303 short chain dehydrogenase; Provisional

Probab=86.36  E-value=0.83  Score=39.72  Aligned_cols=75  Identities=13%  Similarity=0.118  Sum_probs=46.9

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc----------c-------cCCCCCCEEEEeCCC
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY----------R-------ENLIDIPIIIADLKN  115 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg----------~-------~~~~~v~~v~vDv~D  115 (184)
                      ++||+.-|.|-   ++|----++.+|++.  +  .++.+.+|+....          .       ....++.++++|+.|
T Consensus         6 l~~k~~lITGg---s~GIG~aia~~la~~--G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~   78 (305)
T PRK08303          6 LRGKVALVAGA---TRGAGRGIAVELGAA--G--ATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLV   78 (305)
T ss_pred             CCCCEEEEeCC---CchHHHHHHHHHHHC--C--CEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCC
Confidence            56777777662   123111244455443  4  6788888863110          0       001245688999999


Q ss_pred             HHHHHHHhhc-------CcEEEecc-c
Q psy1304         116 ESSILIMAKK-------CRVILNCV-G  134 (184)
Q Consensus       116 ~~sL~a~l~~-------~dVVIN~a-G  134 (184)
                      +++++++++.       .|++||++ |
T Consensus        79 ~~~v~~~~~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         79 PEQVRALVERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHHHHHHHHHcCCccEEEECCcc
Confidence            9999988763       69999999 6

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=86.26  E-value=2.2  Score=36.56  Aligned_cols=61  Identities=13%  Similarity=0.053  Sum_probs=44.4

Q ss_pred             HHHHHHhhc--CcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         117 SSILIMAKK--CRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       117 ~sL~a~l~~--~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      .+++++++.  .|+|+.|..|...+  .++.+|+++|.| +++  ++-..   .+. +++-+.|+++|+.++
T Consensus        57 ~~~~~ll~~~~iD~V~Iatp~~~H~--e~~~~AL~aGkhVl~EKPla~t~---~ea-~~l~~~a~~~~~~l~  122 (342)
T COG0673          57 TDLEELLADPDIDAVYIATPNALHA--ELALAALEAGKHVLCEKPLALTL---EEA-EELVELARKAGVKLM  122 (342)
T ss_pred             CCHHHHhcCCCCCEEEEcCCChhhH--HHHHHHHhcCCEEEEcCCCCCCH---HHH-HHHHHHHHHcCCcee
Confidence            347778876  69999999666554  788999999999 666  33332   344 467788888887764

>PRK08324 short chain dehydrogenase; Validated

Probab=86.03  E-value=0.48  Score=45.90  Aligned_cols=80  Identities=13%  Similarity=0.138  Sum_probs=50.2

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---CC---CCCCEEEEeCCCHHHHHHHh
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---NL---IDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~---~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ..++.||++-|.|--   .+----++..|++.  +  .++.+.+|+......   ..   .++.++.+|+.|++++.+++
T Consensus       417 ~~~l~gk~vLVTGas---ggIG~~la~~L~~~--G--a~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~  489 (681)
T PRK08324        417 PKPLAGKVALVTGAA---GGIGKATAKRLAAE--G--ACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAF  489 (681)
T ss_pred             CcCCCCCEEEEecCC---CHHHHHHHHHHHHC--c--CEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHH
Confidence            345778887776611   11001144444443  3  578888776532110   00   36778999999999998887


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|+|||++|..
T Consensus       490 ~~~~~~~g~iDvvI~~AG~~  509 (681)
T PRK08324        490 EEAALAFGGVDIVVSNAGIA  509 (681)
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            6       579999999954

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=85.96  E-value=1.3  Score=40.17  Aligned_cols=95  Identities=9%  Similarity=-0.006  Sum_probs=59.8

Q ss_pred             hcccc-ccccCccccceeeecccccCCCCCCCchhhhhhh-CCCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHH
Q psy1304          42 RKEDR-IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKAD-APTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESS  118 (184)
Q Consensus        42 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~-~~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~s  118 (184)
                      +|+.+ |.+.+++.|+.                ....|+. ..|.  .+|.+..-++..|..- ....+ +.+.  +.+.
T Consensus         3 ~~~~vaIvGATG~vG~e----------------llrlL~~~~hP~--~~l~~laS~~saG~~~~~~~~~-~~v~--~~~~   61 (336)
T PRK08040          3 EGWNIALLGATGAVGEA----------------LLELLAERQFPV--GELYALASEESAGETLRFGGKS-VTVQ--DAAE   61 (336)
T ss_pred             CCCEEEEEccCCHHHHH----------------HHHHHhcCCCCc--eEEEEEEccCcCCceEEECCcc-eEEE--eCch
Confidence            34444 78999999999                7788884 4677  6665544333333211 11112 2222  1111


Q ss_pred             HHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         119 ILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       119 L~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                        ..++++|+|+-|++.  .....++..+.++|+..||++++.
T Consensus        62 --~~~~~~Dvvf~a~p~--~~s~~~~~~~~~~g~~VIDlS~~f  100 (336)
T PRK08040         62 --FDWSQAQLAFFVAGR--EASAAYAEEATNAGCLVIDSSGLF  100 (336)
T ss_pred             --hhccCCCEEEECCCH--HHHHHHHHHHHHCCCEEEECChHh
Confidence              123689999999853  245688888889999999999865

>PLN02503 fatty acyl-CoA reductase 2

Probab=85.94  E-value=2.7  Score=41.12  Aligned_cols=102  Identities=16%  Similarity=0.149  Sum_probs=63.1

Q ss_pred             cccccccCccccceeeecccccCCCCC-CCchhhhhhhCCCCCce-eEEeeeecc-----------cc------------
Q psy1304          44 EDRIGESQPFRGQTLSVQDKIRPGRGS-NPRPSAYKADAPTSNLT-RLGLLGARD-----------CL------------   98 (184)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~La~~~~~~~~-~iaLAGrr~-----------~l------------   98 (184)
                      .|-|+-.+-|+||++-|.|-    -|. -..+++.|.+.+|+  + +|-+.-|..           ++            
T Consensus       108 ~~~~~I~~f~~~k~VlVTGa----TGFLGk~LlekLLr~~~~--v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~  181 (605)
T PLN02503        108 ADGIGIAEFLRGKNFLITGA----TGFLAKVLIEKILRTNPD--VGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQET  181 (605)
T ss_pred             cCCcchhhhhcCCEEEEcCC----chHHHHHHHHHHHHhCCC--CcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHh
Confidence            45555566677777777661    110 01255666667777  4 666554421           10            


Q ss_pred             -ccc----CCCCCCEEEEeCCCH------HHHHHHhhcCcEEEeccccccccc-------------hHHHHHHHHcC
Q psy1304          99 -YRE----NLIDIPIIIADLKNE------SSILIMAKKCRVILNCVGPYTWYG-------------EAVVKACIEAK  151 (184)
Q Consensus        99 -g~~----~~~~v~~v~vDv~D~------~sL~a~l~~~dVVIN~aGPf~~~g-------------~~VaeACieAG  151 (184)
                       +..    ...++.++..|+.++      +.++.+.+++|+|||||+......             ..++++|.+.+
T Consensus       182 ~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~  258 (605)
T PLN02503        182 HGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCK  258 (605)
T ss_pred             cCccccccccccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence             000    124677899999986      566777888999999998753211             56888887764

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=85.86  E-value=0.43  Score=38.39  Aligned_cols=32  Identities=19%  Similarity=0.332  Sum_probs=27.6

Q ss_pred             CCCEEEEeCCCHHHHHHHhhcC-------cEEEeccccc
Q psy1304         105 DIPIIIADLKNESSILIMAKKC-------RVILNCVGPY  136 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~~~-------dVVIN~aGPf  136 (184)
                      ++.++.+|+.|++++.++++++       |+|||++|..
T Consensus        52 ~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~   90 (247)
T PRK09730         52 KAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGIL   90 (247)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            4678999999999999988864       7999999965

>PRK11579 putative oxidoreductase; Provisional

Probab=85.48  E-value=2.1  Score=37.77  Aligned_cols=60  Identities=20%  Similarity=0.107  Sum_probs=43.0

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  +.|+|+-|..|...  ..++..|+++|.| +++  ++-.   ..+. +++-+.|+++|+.++
T Consensus        55 ~~~ell~~~~vD~V~I~tp~~~H--~~~~~~al~aGkhVl~EKPla~t---~~ea-~~l~~~a~~~g~~l~  119 (346)
T PRK11579         55 EPQHLFNDPNIDLIVIPTPNDTH--FPLAKAALEAGKHVVVDKPFTVT---LSQA-RELDALAKSAGRVLS  119 (346)
T ss_pred             CHHHHhcCCCCCEEEEcCCcHHH--HHHHHHHHHCCCeEEEeCCCCCC---HHHH-HHHHHHHHHhCCEEE
Confidence            4567775  58999999876654  5899999999999 554  2222   2343 567778899998764

>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5

Probab=85.44  E-value=1.4  Score=39.57  Aligned_cols=39  Identities=21%  Similarity=-0.009  Sum_probs=27.8

Q ss_pred             HHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         142 AVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       142 ~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      --+.||+++||.||..+=..-.  .. ..+.+.|+++|++++
T Consensus       191 ~YA~AAl~~g~~fvN~tP~~~a--~~-P~l~ela~~~gvpi~  229 (295)
T PF07994_consen  191 LYAYAALEAGVPFVNGTPSNIA--DD-PALVELAEEKGVPIA  229 (295)
T ss_dssp             HHHHHHHHTTEEEEE-SSSTTT--TS-HHHHHHHHHHTEEEE
T ss_pred             HHHHHHHHCCCCeEeccCcccc--CC-HHHHHHHHHcCCCee
Confidence            3467899999999987654433  22 367778899998875

5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....

>KOG0725|consensus

Probab=85.43  E-value=0.73  Score=40.12  Aligned_cols=82  Identities=16%  Similarity=0.184  Sum_probs=54.6

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC----------CCCCCEEEEeCCCHHHHH
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN----------LIDIPIIIADLKNESSIL  120 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~----------~~~v~~v~vDv~D~~sL~  120 (184)
                      ..|.||+.-|-|   -.||-.--|+..|++..    .++.+.+|+.+...+.          .+++..+.||+.+++..+
T Consensus         4 ~~l~gkvalVTG---~s~GIG~aia~~la~~G----a~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   76 (270)
T KOG0725|consen    4 GRLAGKVALVTG---GSSGIGKAIALLLAKAG----AKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVE   76 (270)
T ss_pred             ccCCCcEEEEEC---CCChHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHH
Confidence            357788777766   23342233556666666    8899999977543211          145778999999887655


Q ss_pred             HHh--------hcCcEEEecccccccc
Q psy1304         121 IMA--------KKCRVILNCVGPYTWY  139 (184)
Q Consensus       121 a~l--------~~~dVVIN~aGPf~~~  139 (184)
                      +++        .+-|++||.+|.-...
T Consensus        77 ~l~~~~~~~~~GkidiLvnnag~~~~~  103 (270)
T KOG0725|consen   77 KLVEFAVEKFFGKIDILVNNAGALGLT  103 (270)
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCcCCCC
Confidence            554        3589999999976544

>KOG1208|consensus

Probab=85.40  E-value=1.1  Score=40.17  Aligned_cols=88  Identities=18%  Similarity=0.100  Sum_probs=60.9

Q ss_pred             ccccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC---------CCCCCEEEEeCCC
Q psy1304          45 DRIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN---------LIDIPIIIADLKN  115 (184)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~---------~~~v~~v~vDv~D  115 (184)
                      ..+.....+.|++.-|-|--. |=|  --+|..||...    .++.+++|+.+.+++.         ..++.++++|+.|
T Consensus        25 ~~~~~~~~~~~~~~vVTGans-GIG--~eta~~La~~G----a~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLss   97 (314)
T KOG1208|consen   25 LEVTHGIDLSGKVALVTGATS-GIG--FETARELALRG----AHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSS   97 (314)
T ss_pred             ceeeccccCCCcEEEEECCCC-chH--HHHHHHHHhCC----CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCC
Confidence            334455677888888887433 222  22455555555    7899999876443321         2456679999999


Q ss_pred             HHHHHHHhhc-------CcEEEecccccccc
Q psy1304         116 ESSILIMAKK-------CRVILNCVGPYTWY  139 (184)
Q Consensus       116 ~~sL~a~l~~-------~dVVIN~aGPf~~~  139 (184)
                      .+++.++.+.       -|+.||.||-+...
T Consensus        98 l~SV~~fa~~~~~~~~~ldvLInNAGV~~~~  128 (314)
T KOG1208|consen   98 LKSVRKFAEEFKKKEGPLDVLINNAGVMAPP  128 (314)
T ss_pred             HHHHHHHHHHHHhcCCCccEEEeCcccccCC
Confidence            9999998874       68999999977654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=85.28  E-value=1  Score=37.34  Aligned_cols=32  Identities=22%  Similarity=0.485  Sum_probs=23.3

Q ss_pred             CCCEEEEeCCCHHHHH----HHh-------hcCcEEEeccccc
Q psy1304         105 DIPIIIADLKNESSIL----IMA-------KKCRVILNCVGPY  136 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~----a~l-------~~~dVVIN~aGPf  136 (184)
                      +..++.+|+.|++++.    +++       .+.|+|||++|-+
T Consensus        53 ~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~   95 (267)
T TIGR02685        53 SAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAF   95 (267)
T ss_pred             ceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccC
Confidence            3457889999987653    333       2589999999953

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=85.20  E-value=0.75  Score=37.09  Aligned_cols=58  Identities=5%  Similarity=-0.101  Sum_probs=38.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccc-cc-------cCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCL-YR-------ENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~l-g~-------~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGP  135 (184)
                      ++..|++..    .++.+..+++.. ..       ....++.++.+|+.|++++.++++.       .|.+||++|-
T Consensus        14 ~a~~l~~~G----~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~   86 (239)
T TIGR01831        14 IANRLAADG----FEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGI   86 (239)
T ss_pred             HHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            556666543    456666554311 00       0124578999999999999888764       5899999984

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07985 oxidoreductase; Provisional

Probab=85.17  E-value=1.3  Score=37.90  Aligned_cols=77  Identities=10%  Similarity=0.033  Sum_probs=47.0

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc-c--------ccCCCCCCEEEEeCCCHHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL-Y--------RENLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l-g--------~~~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      .++||+.-|-|-   .+|----++..|++.  +  .++.+.+|++.. .        .....++.++.+|+.|++++.++
T Consensus        46 ~~~~k~vlITGa---s~gIG~aia~~L~~~--G--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  118 (294)
T PRK07985         46 RLKDRKALVTGG---DSGIGRAAAIAYARE--G--ADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSL  118 (294)
T ss_pred             ccCCCEEEEECC---CCcHHHHHHHHHHHC--C--CEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHH
Confidence            477888777762   222111144555544  3  566666653211 0        00113466889999999998887


Q ss_pred             hhc-------CcEEEecccc
Q psy1304         123 AKK-------CRVILNCVGP  135 (184)
Q Consensus       123 l~~-------~dVVIN~aGP  135 (184)
                      ++.       .|++||++|.
T Consensus       119 ~~~~~~~~g~id~lv~~Ag~  138 (294)
T PRK07985        119 VHEAHKALGGLDIMALVAGK  138 (294)
T ss_pred             HHHHHHHhCCCCEEEECCCC
Confidence            764       5999999984

>PRK06270 homoserine dehydrogenase; Provisional

Probab=85.16  E-value=3.7  Score=36.79  Aligned_cols=62  Identities=13%  Similarity=0.061  Sum_probs=44.5

Q ss_pred             HHHHhh--cCcEEEecccccccc---chHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWY---GEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~---g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      +.+++.  ..|+||.|.++....   +...++.|+++|.|-|=-+ .-+..... .++.+.|+++|+.+
T Consensus        81 ~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaN-K~pla~~~-~eL~~~A~~~g~~~  147 (341)
T PRK06270         81 GLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSN-KGPLALAY-KELKELAKKNGVRF  147 (341)
T ss_pred             HHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCC-cHHHHhhH-HHHHHHHHHcCCEE
Confidence            445553  589999999876543   3678899999999976432 23444444 68899999999865

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=84.45  E-value=1.6  Score=39.55  Aligned_cols=78  Identities=12%  Similarity=0.026  Sum_probs=52.5

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|.|.-                +.+-|+++ |+  +.+.-..-++.             .+..+   .+++++++
T Consensus         6 IvGasGy~G~e----------------l~rlL~~H-P~--~el~~l~s~~~-------------~~~~~---~~~~~~~~   50 (310)
T TIGR01851         6 IDGEAGTTGLQ----------------IRERLSGR-DD--IELLSIAPDRR-------------KDAAE---RAKLLNAA   50 (310)
T ss_pred             EECCCChhHHH----------------HHHHHhCC-CC--eEEEEEecccc-------------cCcCC---HhHhhcCC
Confidence            56788898887                67777766 66  55444321111             11112   34567899


Q ss_pred             cEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         127 RVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       127 dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      |+|+-|++ - ......+....++|+.-||++++.
T Consensus        51 D~vFlalp-~-~~s~~~~~~~~~~g~~VIDlSadf   83 (310)
T TIGR01851        51 DVAILCLP-D-DAAREAVSLVDNPNTCIIDASTAY   83 (310)
T ss_pred             CEEEECCC-H-HHHHHHHHHHHhCCCEEEECChHH
Confidence            99999984 3 244677777888999999999864

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>KOG1611|consensus

Probab=84.32  E-value=3.8  Score=36.28  Aligned_cols=96  Identities=17%  Similarity=0.105  Sum_probs=60.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeecc-ccc-----c--cCCCCCCEEEEeCCCHHHHHHHhh---------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARD-CLY-----R--ENLIDIPIIIADLKNESSILIMAK---------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~-~lg-----~--~~~~~v~~v~vDv~D~~sL~a~l~---------~~dVVIN~aGPf  136 (184)
                      ++..|. ..++  ..+-++++|+ ++.     .  ..++++.++++|+++.+++..+++         +.++.||++|-+
T Consensus        19 LVk~ll-k~~~--i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~   95 (249)
T KOG1611|consen   19 LVKELL-KDKG--IEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIA   95 (249)
T ss_pred             HHHHHh-cCCC--cEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEecccee
Confidence            556666 4455  6666777663 221     1  134789999999999999998875         578999999988


Q ss_pred             cccc------hHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHc
Q psy1304         137 TWYG------EAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQES  178 (184)
Q Consensus       137 ~~~g------~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~Akaa  178 (184)
                      ..|+      ..+.-.|.+..+-     |-....+.+ .-+-.+|+.+
T Consensus        96 ~~y~~~~~~~r~~~~~~~~tN~v-----~~il~~Q~~-lPLLkkaas~  137 (249)
T KOG1611|consen   96 LSYNTVLKPSRAVLLEQYETNAV-----GPILLTQAF-LPLLKKAASK  137 (249)
T ss_pred             eecccccCCcHHHHHHHhhhcch-----hHHHHHHHH-HHHHHHHhhc
Confidence            7765      4445556555432     333333443 4444444443

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=83.94  E-value=2  Score=32.82  Aligned_cols=43  Identities=19%  Similarity=0.338  Sum_probs=35.0

Q ss_pred             CHHHHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCC
Q psy1304         115 NESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       115 D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDlt  158 (184)
                      +.+.+..+++++|+||+|...+. ....+.+.|.+.|..|++..
T Consensus        82 ~~~~~~~~~~~~d~vi~~~d~~~-~~~~l~~~~~~~~~p~i~~~  124 (135)
T PF00899_consen   82 DEENIEELLKDYDIVIDCVDSLA-ARLLLNEICREYGIPFIDAG  124 (135)
T ss_dssp             SHHHHHHHHHTSSEEEEESSSHH-HHHHHHHHHHHTT-EEEEEE
T ss_pred             ccccccccccCCCEEEEecCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence            56778899999999999998753 34678889999999999865

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=83.71  E-value=2.3  Score=38.50  Aligned_cols=80  Identities=14%  Similarity=0.152  Sum_probs=47.5

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc--cc--CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY--RE--NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg--~~--~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      +.+++|++.-|-|-   .++--..++.+|++.  +  .++.+.+++....  .+  ..-...++.+|+.|+++++++++ 
T Consensus       205 ~~~~~g~~vlItGa---sggIG~~la~~l~~~--G--a~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  277 (450)
T PRK08261        205 DRPLAGKVALVTGA---ARGIGAAIAEVLARD--G--AHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEH  277 (450)
T ss_pred             ccCCCCCEEEEecC---CCHHHHHHHHHHHHC--C--CEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH
Confidence            34567888777661   122111244444443  3  5666665532110  00  00134688999999999988876 


Q ss_pred             ------cCcEEEeccccc
Q psy1304         125 ------KCRVILNCVGPY  136 (184)
Q Consensus       125 ------~~dVVIN~aGPf  136 (184)
                            +.|+|||++|..
T Consensus       278 ~~~~~g~id~vi~~AG~~  295 (450)
T PRK08261        278 LAERHGGLDIVVHNAGIT  295 (450)
T ss_pred             HHHhCCCCCEEEECCCcC
Confidence                  479999999954

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=83.54  E-value=0.57  Score=41.18  Aligned_cols=111  Identities=11%  Similarity=0.124  Sum_probs=61.6

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcCcEEEe
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILN  131 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN  131 (184)
                      ...|+++.|-|-=+-|+.    ++..|....    .++.+..|+..... .........+   +.+++.+.++++|+|||
T Consensus       148 ~l~gk~v~IiG~G~iG~a----vA~~L~~~G----~~V~v~~R~~~~~~-~~~~~g~~~~---~~~~l~~~l~~aDiVin  215 (287)
T TIGR02853       148 TIHGSNVMVLGFGRTGMT----IARTFSALG----ARVFVGARSSADLA-RITEMGLIPF---PLNKLEEKVAEIDIVIN  215 (287)
T ss_pred             CCCCCEEEEEcChHHHHH----HHHHHHHCC----CEEEEEeCCHHHHH-HHHHCCCeee---cHHHHHHHhccCCEEEE
Confidence            346888888774333333    344443332    46777766553211 0000111111   24567889999999999


Q ss_pred             ccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         132 CVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       132 ~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      |+ |........++ .+..++-.+|++-.+.-+     .| +.|++.|+..
T Consensus       216 t~-P~~ii~~~~l~-~~k~~aliIDlas~Pg~t-----df-~~Ak~~G~~a  258 (287)
T TIGR02853       216 TI-PALVLTADVLS-KLPKHAVIIDLASKPGGT-----DF-EYAKKRGIKA  258 (287)
T ss_pred             CC-ChHHhCHHHHh-cCCCCeEEEEeCcCCCCC-----CH-HHHHHCCCEE
Confidence            98 55444444433 346678899998654221     23 3567777554

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=83.25  E-value=2.7  Score=32.21  Aligned_cols=42  Identities=14%  Similarity=0.207  Sum_probs=34.5

Q ss_pred             HHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCC
Q psy1304         118 SILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGE  160 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE  160 (184)
                      .....++++|+||.|...+ ..-..+.++|.+.|++|+|....
T Consensus        82 ~~~~~~~~~diVi~~~d~~-~~~~~l~~~~~~~~i~~i~~~~~  123 (143)
T cd01483          82 NLDDFLDGVDLVIDAIDNI-AVRRALNRACKELGIPVIDAGGL  123 (143)
T ss_pred             hHHHHhcCCCEEEECCCCH-HHHHHHHHHHHHcCCCEEEEcCC
Confidence            3477889999999999875 33577899999999999997654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK12747 short chain dehydrogenase; Provisional

Probab=83.06  E-value=1.5  Score=35.82  Aligned_cols=31  Identities=19%  Similarity=0.204  Sum_probs=24.6

Q ss_pred             CCCEEEEeCCCHHHHHHHhh-------------cCcEEEecccc
Q psy1304         105 DIPIIIADLKNESSILIMAK-------------KCRVILNCVGP  135 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~-------------~~dVVIN~aGP  135 (184)
                      ....+.+|+.|.+++..+++             +.|++||++|.
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~   98 (252)
T PRK12747         55 SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI   98 (252)
T ss_pred             ceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCc
Confidence            45678899999888776553             58999999994

>PRK10206 putative oxidoreductase; Provisional

Probab=82.87  E-value=3.8  Score=36.52  Aligned_cols=60  Identities=13%  Similarity=0.119  Sum_probs=43.3

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  +.|+|+.|..|...  ..++.+|+++|.| +++  ++-+.   .+. +++-+.|+++|+.++
T Consensus        55 ~~~ell~~~~iD~V~I~tp~~~H--~~~~~~al~aGkhVl~EKPla~~~---~ea-~~l~~~a~~~~~~l~  119 (344)
T PRK10206         55 DLDEVLNDPDVKLVVVCTHADSH--FEYAKRALEAGKNVLVEKPFTPTL---AEA-KELFALAKSKGLTVT  119 (344)
T ss_pred             CHHHHhcCCCCCEEEEeCCchHH--HHHHHHHHHcCCcEEEecCCcCCH---HHH-HHHHHHHHHhCCEEE
Confidence            4677775  58999999866655  5899999999999 665  33332   343 566778888888764

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=82.72  E-value=1.3  Score=39.78  Aligned_cols=80  Identities=13%  Similarity=0.208  Sum_probs=51.9

Q ss_pred             CchhhhhhhCC----CCCceeEEeeeecccccccCC-----CCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccchH
Q psy1304          72 PRPSAYKADAP----TSNLTRLGLLGARDCLYRENL-----IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEA  142 (184)
Q Consensus        72 ~r~~~~La~~~----~~~~~~iaLAGrr~~lg~~~~-----~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g~~  142 (184)
                      |+.+-.|.+.+    .+  .++++.||+...|.+.+     .+.....++-.. .+++++++++|+||.|+|=-.     
T Consensus       142 p~ai~~ll~~~~i~~~G--k~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT-~~l~e~~~~ADIVIsavg~~~-----  213 (296)
T PRK14188        142 PLGCMMLLRRVHGDLSG--LNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT-RDLPAVCRRADILVAAVGRPE-----  213 (296)
T ss_pred             HHHHHHHHHHhCCCCCC--CEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC-CCHHHHHhcCCEEEEecCChh-----
Confidence            45555555443    34  79999999887776543     456666675333 257889999999999997322     


Q ss_pred             HHHH-HHHcCCCEeeCCC
Q psy1304         143 VVKA-CIEAKTHHVDITG  159 (184)
Q Consensus       143 VaeA-CieAGthYVDltG  159 (184)
                      .+++ -+..|++.||++-
T Consensus       214 ~v~~~~lk~GavVIDvGi  231 (296)
T PRK14188        214 MVKGDWIKPGATVIDVGI  231 (296)
T ss_pred             hcchheecCCCEEEEcCC
Confidence            2222 2666777766643

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=82.42  E-value=0.44  Score=41.20  Aligned_cols=115  Identities=11%  Similarity=0.040  Sum_probs=58.3

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC---CCCCEEEEeCCCHHHHHHHhhcCcE
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL---IDIPIIIADLKNESSILIMAKKCRV  128 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~---~~v~~v~vDv~D~~sL~a~l~~~dV  128 (184)
                      .++||+..|-|-=.-||.    ++.+|+....   .+|.+..|+.+...+..   .....+.++.    ++...+.++|+
T Consensus       120 ~~~~k~vlVlGaGg~a~a----i~~aL~~~g~---~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~----~~~~~~~~~Di  188 (278)
T PRK00258        120 DLKGKRILILGAGGAARA----VILPLLDLGV---AEITIVNRTVERAEELAKLFGALGKAELDL----ELQEELADFDL  188 (278)
T ss_pred             CCCCCEEEEEcCcHHHHH----HHHHHHHcCC---CEEEEEeCCHHHHHHHHHHhhhccceeecc----cchhccccCCE
Confidence            356666666663222233    5555554432   36888888654322111   1111011111    23466788999


Q ss_pred             EEeccccccccc----hHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         129 ILNCVGPYTWYG----EAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       129 VIN~aGPf~~~g----~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ||||.. -...+    .++...++..+...+|+.=.+.-     ..|-+.|+++|+.++
T Consensus       189 vInaTp-~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~-----T~ll~~A~~~G~~~~  241 (278)
T PRK00258        189 IINATS-AGMSGELPLPPLPLSLLRPGTIVYDMIYGPLP-----TPFLAWAKAQGARTI  241 (278)
T ss_pred             EEECCc-CCCCCCCCCCCCCHHHcCCCCEEEEeecCCCC-----CHHHHHHHHCcCeec
Confidence            999983 32211    24444566667777777432221     234445666666543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=81.07  E-value=1  Score=40.43  Aligned_cols=82  Identities=15%  Similarity=0.121  Sum_probs=49.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecc--------cccc-cCCCCCC----EEEEeCCCHHHHHHHhh--cCcEEEeccccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARD--------CLYR-ENLIDIP----IIIADLKNESSILIMAK--KCRVILNCVGPYTW  138 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~--------~lg~-~~~~~v~----~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~  138 (184)
                      ++.+|++..|.   +|-+-++++        ++.. ....+++    ++..|+.|.+.|..+++  ++|+|+|+|- |-+
T Consensus        14 L~rql~~~~p~---~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdiVfHaAA-~Kh   89 (293)
T PF02719_consen   14 LVRQLLRYGPK---KLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDIVFHAAA-LKH   89 (293)
T ss_dssp             HHHHHHCCB-S---EEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SEEEE-------
T ss_pred             HHHHHHhcCCC---eEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCEEEEChh-cCC
Confidence            56777777665   666777654        2210 0113343    34779999999999999  8999999995 322


Q ss_pred             cc-----------------hHHHHHHHHcCCC-EeeCCC
Q psy1304         139 YG-----------------EAVVKACIEAKTH-HVDITG  159 (184)
Q Consensus       139 ~g-----------------~~VaeACieAGth-YVDltG  159 (184)
                      -.                 .+++++|++.|+. +|-++=
T Consensus        90 Vpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~IST  128 (293)
T PF02719_consen   90 VPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFIST  128 (293)
T ss_dssp             HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEE
T ss_pred             CChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence            11                 7899999999998 666653

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=80.68  E-value=1.8  Score=36.18  Aligned_cols=85  Identities=15%  Similarity=0.259  Sum_probs=50.5

Q ss_pred             cccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc-------c----cc-----c----CCCCCC
Q psy1304          48 GESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC-------L----YR-----E----NLIDIP  107 (184)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~-------l----g~-----~----~~~~v~  107 (184)
                      -+.++|=|.-                +...|.+.+++  .+|-.--|...       +    ..     .    ...++.
T Consensus         2 TGaTGflG~~----------------ll~~Ll~~~~~--~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~   63 (249)
T PF07993_consen    2 TGATGFLGSH----------------LLEELLRQPPD--VKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIE   63 (249)
T ss_dssp             E-TTSHHHHH----------------HHHHHHHHS-T--TEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEE
T ss_pred             cCCCcHHHHH----------------HHHHHHcCCCC--cEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEE
Confidence            3567787777                67778877776  46666655321       1    00     0    147889


Q ss_pred             EEEEeCCCH------HHHHHHhhcCcEEEeccccccccc-------------hHHHHHHHHc
Q psy1304         108 IIIADLKNE------SSILIMAKKCRVILNCVGPYTWYG-------------EAVVKACIEA  150 (184)
Q Consensus       108 ~v~vDv~D~------~sL~a~l~~~dVVIN~aGPf~~~g-------------~~VaeACieA  150 (184)
                      ++..|+.++      +....+.+++|+||||++......             ..+++.|.+.
T Consensus        64 ~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~  125 (249)
T PF07993_consen   64 VVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG  125 (249)
T ss_dssp             EEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS
T ss_pred             EEeccccccccCCChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc
Confidence            999999874      578888899999999998765442             6788888843

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=80.38  E-value=0.11  Score=40.32  Aligned_cols=94  Identities=10%  Similarity=0.080  Sum_probs=55.4

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC---CCCCEEEEeCCCHHHHHHHhhcCcE
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL---IDIPIIIADLKNESSILIMAKKCRV  128 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~---~~v~~v~vDv~D~~sL~a~l~~~dV  128 (184)
                      .++|++.-|-|-=.-+|.    ++.+|+.....   +|.+.+|+.+...+..   ....+..++.++   +.+.+.++|+
T Consensus         9 ~l~~~~vlviGaGg~ar~----v~~~L~~~g~~---~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~Di   78 (135)
T PF01488_consen    9 DLKGKRVLVIGAGGAARA----VAAALAALGAK---EITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADI   78 (135)
T ss_dssp             TGTTSEEEEESSSHHHHH----HHHHHHHTTSS---EEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESE
T ss_pred             CcCCCEEEEECCHHHHHH----HHHHHHHcCCC---EEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCe
Confidence            467788777774334444    67777766433   6999998765433211   334555666644   5578899999


Q ss_pred             EEeccccccccchHHHHHHHHcC---C-CEeeCC
Q psy1304         129 ILNCVGPYTWYGEAVVKACIEAK---T-HHVDIT  158 (184)
Q Consensus       129 VIN~aGPf~~~g~~VaeACieAG---t-hYVDlt  158 (184)
                      ||||.+--..   .+-+..++.+   . -.+|++
T Consensus        79 vI~aT~~~~~---~i~~~~~~~~~~~~~~v~Dla  109 (135)
T PF01488_consen   79 VINATPSGMP---IITEEMLKKASKKLRLVIDLA  109 (135)
T ss_dssp             EEE-SSTTST---SSTHHHHTTTCHHCSEEEES-
T ss_pred             EEEecCCCCc---ccCHHHHHHHHhhhhceeccc
Confidence            9999742211   2233334444   2 578884

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=80.06  E-value=5.8  Score=35.44  Aligned_cols=36  Identities=14%  Similarity=0.139  Sum_probs=30.0

Q ss_pred             hhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCC
Q psy1304         123 AKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGE  160 (184)
Q Consensus       123 l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE  160 (184)
                      +.++|+|+.|+++.  ....++.++.++|++-||++|+
T Consensus        71 ~~~~DvVf~a~p~~--~s~~~~~~~~~~G~~VIDlsg~  106 (341)
T TIGR00978        71 SKDVDIVFSALPSE--VAEEVEPKLAEAGKPVFSNASN  106 (341)
T ss_pred             hccCCEEEEeCCHH--HHHHHHHHHHHCCCEEEECChh
Confidence            47899999999644  3457778999999999999987

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=80.05  E-value=0.43  Score=41.76  Aligned_cols=55  Identities=9%  Similarity=0.021  Sum_probs=29.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCC----CCCC-EEEEeCCCHHHHHHHhhcCcEEEec--cc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENL----IDIP-IIIADLKNESSILIMAKKCRVILNC--VG  134 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~----~~v~-~v~vDv~D~~sL~a~l~~~dVVIN~--aG  134 (184)
                      ++.+|+....   .+|.+..|+.++.+...    .... ......   +++.+.++++|+||||  +|
T Consensus       142 ia~aL~~~G~---~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~---~~~~~~~~~aDiVInaTp~G  203 (284)
T PRK12549        142 VAHALLTLGV---ERLTIFDVDPARAAALADELNARFPAARATAG---SDLAAALAAADGLVHATPTG  203 (284)
T ss_pred             HHHHHHHcCC---CEEEEECCCHHHHHHHHHHHHhhCCCeEEEec---cchHhhhCCCCEEEECCcCC
Confidence            4455555442   26888887654332111    1111 122222   2345677899999999  55

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	184
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	2e-08
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 49.0 bits (117), Expect = 2e-08
 Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFM 164
            +     D K+E+ +         +++   P+ +    + KA   A  H+ D+T +    
Sbjct: 49  GVATKQVDAKDEAGLAKALGGFDAVISAA-PF-FLTPIIAKAAKAAGAHYFDLTEDVAAT 106

Query: 165 EYMQYEYNTRAQ 176
             ++      +Q
Sbjct: 107 NAVR-ALVEDSQ 117

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 1e-04
 Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 35/174 (20%)

Query: 4   RITAV-SLKPLLTQILFEGEYLI------FSKGTVTAKVLSSRK--QRKEDRI-----GE 49
           R+     L+  L + L   + ++        K  V   V  S K   + + +I       
Sbjct: 133 RLQPYLKLRQALLE-LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191

Query: 50  SQPFRG-----QTLSVQ-DKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL 103
                      Q L  Q D     R  +      +  +  + L RL  L ++   Y   L
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL--LKSKP--YENCL 247

Query: 104 IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDI 157
           +    ++ +++N  +       C+++L      T   + V      A T H+ +
Sbjct: 248 L----VLLNVQNAKAWNAFNLSCKILL------TTRFKQVTDFLSAATTTHISL 291

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	184
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	99.64
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	99.17
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.12
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	99.11
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.72
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.52
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	98.23
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	98.21
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	98.01
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.99
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.99
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.97
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.92
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.91
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.81
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.81
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.79
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.77
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.76
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.75
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.73
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	97.71
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.65
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	97.63
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.62
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	97.57
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	97.56
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	97.55
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	97.49
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	97.48
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.46
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	97.45
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	97.44
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	97.44
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	97.41
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.41
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.4
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.39
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	97.36
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	97.34
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	97.29
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	97.26
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	97.25
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.25
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	97.13
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	97.1
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	97.05
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	97.03
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.99
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	96.96
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	96.86
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	96.85
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	96.84
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	96.84
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	96.79
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.79
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.77
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.76
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	96.75
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	96.75
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	96.71
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.7
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	96.69
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	96.65
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.61
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	96.61
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.59
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.59
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	96.55
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.54
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.51
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	96.48
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.47
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.44
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	96.43
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	96.41
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.4
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	96.4
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	96.37
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.37
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	96.33
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	96.29
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.26
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.26
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	96.25
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.22
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.22
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.14
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.12
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.11
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	96.11
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.09
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.09
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.03
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.02
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	96.02
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	95.99
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	95.98
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	95.97
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	95.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	95.95
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	95.94
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.93
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.92
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.92
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	95.87
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	95.85
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	95.85
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	95.85
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.85
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.84
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.84
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.84
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	95.82
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	95.82
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	95.81
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.79
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	95.78
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	95.78
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	95.77
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	95.77
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	95.76
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	95.75
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.73
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	95.72
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	95.72
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	95.72
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	95.7
4e4y_A	244	Short chain dehydrogenase family protein; structur	95.69
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	95.68
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.68
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.67
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.66
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.66
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.64
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	95.64
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	95.63
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	95.62
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.61
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	95.61
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	95.61
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.6
1spx_A	278	Short-chain reductase family member (5L265); paral	95.57
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	95.57
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	95.57
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	95.56
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	95.53
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.53
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	95.52
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.52
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	95.48
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	95.48
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.47
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.47
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	95.45
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	95.45
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	95.45
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	95.44
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.42
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	95.42
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.4
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.39
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.38
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	95.38
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.36
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	95.35
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.34
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	95.33
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	95.33
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	95.32
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.32
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	95.29
4f6c_A	427	AUSA reductase domain protein; thioester reductase	95.28
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	95.27
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	95.27
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.26
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.25
1xkq_A	280	Short-chain reductase family member (5D234); parra	95.25
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	95.24
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.23
3rih_A	293	Short chain dehydrogenase or reductase; structural	95.23
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.22
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	95.2
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	95.2
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	95.2
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	95.18
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	95.17
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.17
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	95.16
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	95.15
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.14
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	95.14
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	95.1
1xhl_A	297	Short-chain dehydrogenase/reductase family member	95.09
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	95.09
3cxt_A	291	Dehydrogenase with different specificities; rossma	95.08
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	95.06
4f6l_B	508	AUSA reductase domain protein; thioester reductase	95.06
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	95.06
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.06
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	95.05
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	95.05
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.04
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	95.04
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.03
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	95.03
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.02
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.02
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	95.02
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	95.02
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	95.02
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	95.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	94.95
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	94.94
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	94.94
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	94.94
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	94.91
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	94.9
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	94.9
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	94.89
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	94.89
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.88
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	94.88
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	94.87
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	94.86
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	94.86
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	94.85
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	94.85
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	94.84
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	94.84
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	94.83
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	94.83
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	94.81
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	94.8
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.79
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	94.79
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	94.76
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	94.74
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	94.73
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	94.73
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	94.73
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	94.73
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	94.72
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	94.7
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	94.69
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	94.68
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	94.62
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	94.62
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	94.61
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.61
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	94.6
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	94.6
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	94.6
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	94.53
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	94.51
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	94.49
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	94.47
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	94.44
1xq1_A	266	Putative tropinone reducatse; structural genomics,	94.39
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	94.38
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	94.37
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	94.36
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	94.31
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	94.3
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	94.22
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	94.21
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	94.12
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	94.02
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	94.0
3bio_A	304	Oxidoreductase, GFO/IDH/MOCA family; structural ge	93.91
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	93.89
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	93.89
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	93.84
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	93.81
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	93.76
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	93.72
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	93.7
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	93.64
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	93.63
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	93.62
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	93.61
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	93.57
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	93.54
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	93.45
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	93.36
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	93.27
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	93.22
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	93.21
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	93.11
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	93.05
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	93.04
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	92.99
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	92.86
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	92.83
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	92.68
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	92.68
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	92.66
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	92.46
4h3v_A	390	Oxidoreductase domain protein; structural genomics	92.28
1f06_A	320	MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH	92.16
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	92.1
3c8m_A	331	Homoserine dehydrogenase; structural genomics, APC	91.78
3c1a_A	315	Putative oxidoreductase; ZP_00056571.1, oxidoreduc	91.42
1lc0_A	294	Biliverdin reductase A; oxidoreductase, tetrapyrro	91.4
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	91.22
3fhl_A	362	Putative oxidoreductase; NAD-binding domain, PSI-2	91.05
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	91.04
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	91.03
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	90.94
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	90.84
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	90.82
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	90.75
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	90.73
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	90.57
2nu8_A	288	Succinyl-COA ligase [ADP-forming] subunit alpha; c	90.53
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	90.34
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	90.23
2p2s_A	336	Putative oxidoreductase; YP_050235.1, structural g	90.23
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	90.21
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	90.13
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	89.89
3upl_A	446	Oxidoreductase; rossmann fold, NADPH binding; 1.50	89.68
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	89.65
3f4l_A	345	Putative oxidoreductase YHHX; structural genomics,	89.57
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	89.53
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	89.5
1tlt_A	319	Putative oxidoreductase (virulence factor MVIM HO;	89.38
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	89.37
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	89.29
1ydw_A	362	AX110P-like protein; structural genomics, protein	89.28
2ixa_A	444	Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver	89.15
3kux_A	352	Putative oxidoreductase; oxidoreductase family, cs	89.09
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	89.02
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	88.97
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	88.88
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	88.79
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	88.71
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	88.56
3moi_A	387	Probable dehydrogenase; structural genomics, PSI2,	88.35
2yv1_A	294	Succinyl-COA ligase [ADP-forming] subunit alpha; C	88.2
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	88.01
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	87.97
4gmf_A	372	Yersiniabactin biosynthetic protein YBTU; rossmann	87.94
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	87.7
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	87.67
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	87.36
3mz0_A	344	Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd;	87.31
3gdo_A	358	Uncharacterized oxidoreductase YVAA; structural ge	87.06
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	86.98
3oa2_A	318	WBPB; oxidoreductase, sugar biosynthesis, dehydrog	86.83
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	86.78
1j5p_A	253	Aspartate dehydrogenase; TM1643, structural genomi	86.58
3oqb_A	383	Oxidoreductase; structural genomics, protein struc	86.5
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	86.38
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	86.31
4ew6_A	330	D-galactose-1-dehydrogenase protein; nysgrc, PSI-b	85.91
3v5n_A	417	Oxidoreductase; structural genomics, PSI-biology,	85.86
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	85.73
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	85.56
3dty_A	398	Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram	85.4
2yv2_A	297	Succinyl-COA synthetase alpha chain; COA-binding d	85.3
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	85.27
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	85.25
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	85.04
4had_A	350	Probable oxidoreductase protein; structural genomi	84.62
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	84.38
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	84.38
1h6d_A	433	Precursor form of glucose-fructose oxidoreductase;	84.37
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	84.27
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	84.07
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	83.7
3m2t_A	359	Probable dehydrogenase; PSI, SGXNY, structural gen	83.56
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	83.48
3ec7_A	357	Putative dehydrogenase; alpha-beta, structural gen	83.42
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	83.17
3u3x_A	361	Oxidoreductase; structural genomics, PSI-biology,	83.15
3ing_A	325	Homoserine dehydrogenase; NP_394635.1, structural	82.66
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	81.78
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	81.7
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	81.41
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	81.26
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	81.05
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	80.97
1cf2_P	337	Protein (glyceraldehyde-3-phosphate dehydrogenase)	80.67
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	80.63
3btv_A	438	Galactose/lactose metabolism regulatory protein GA	80.43
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	80.4
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	80.2
1vjp_A	394	MYO-inositol-1-phosphate synthase-related protein;	80.08

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=99.64  E-value=1.3e-16  Score=138.66  Aligned_cols=118  Identities=14%  Similarity=0.086  Sum_probs=91.8

Q ss_pred             hhhhccccc-cccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHH
Q psy1304          39 RKQRKEDRI-GESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNES  117 (184)
Q Consensus        39 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~  117 (184)
                      .|.||--++ .++ +|-|+.                ++.+|++.     -.|.+++++.+.-.........+++|++|.+
T Consensus        12 ~~g~~mkilvlGa-G~vG~~----------------~~~~L~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~   69 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRA----------------IAWDLKDE-----FDVYIGDVNNENLEKVKEFATPLKVDASNFD   69 (365)
T ss_dssp             ----CCEEEEECC-SHHHHH----------------HHHHHTTT-----SEEEEEESCHHHHHHHTTTSEEEECCTTCHH
T ss_pred             ccCCccEEEEECC-CHHHHH----------------HHHHHhcC-----CCeEEEEcCHHHHHHHhccCCcEEEecCCHH
Confidence            445554443 666 888887                77888753     3467788765433323356778899999999


Q ss_pred             HHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeeeC
Q psy1304         118 SILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKCT  184 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Ivt  184 (184)
                      +|.++++++|+||||+|||+  +.+++++|+++|+||||+|++.++.    +++|++|+++|++++.
T Consensus        70 ~l~~~~~~~DvVi~~~p~~~--~~~v~~~~~~~g~~yvD~s~~~~~~----~~l~~~a~~~g~~~i~  130 (365)
T 3abi_A           70 KLVEVMKEFELVIGALPGFL--GFKSIKAAIKSKVDMVDVSFMPENP----LELRDEAEKAQVTIVF  130 (365)
T ss_dssp             HHHHHHTTCSEEEECCCGGG--HHHHHHHHHHHTCEEEECCCCSSCG----GGGHHHHHHTTCEEEC
T ss_pred             HHHHHHhCCCEEEEecCCcc--cchHHHHHHhcCcceEeeeccchhh----hhhhhhhccCCceeee
Confidence            99999999999999999984  5799999999999999999988753    4689999999999874

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.12  E-value=1.1e-10  Score=83.09  Aligned_cols=97  Identities=12%  Similarity=0.086  Sum_probs=76.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccchHHHHHHHHcCC
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKT  152 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGt  152 (184)
                      ++.+|.+.. .  .++.+..|+...... ....+.++.+|+.|++++.++++++|+||||+|+..  ..+++++|.+.|+
T Consensus        20 ~~~~l~~~g-~--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~--~~~~~~~~~~~g~   94 (118)
T 3ic5_A           20 IAALLKTSS-N--YSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL--TPIIAKAAKAAGA   94 (118)
T ss_dssp             HHHHHHHCS-S--EEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG--HHHHHHHHHHTTC
T ss_pred             HHHHHHhCC-C--ceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh--hHHHHHHHHHhCC
Confidence            666676654 3  567777776543221 124577899999999999999999999999996543  4799999999999


Q ss_pred             CEeeCCCChHHHHHHHHHhHHHHH
Q psy1304         153 HHVDITGEPYFMEYMQYEYNTRAQ  176 (184)
Q Consensus       153 hYVDltGE~~~~~~ii~~lhe~Ak  176 (184)
                      +|+|++++.++.+.+ .+++++|+
T Consensus        95 ~~~~~~~~~~~~~~~-~~~~~~a~  117 (118)
T 3ic5_A           95 HYFDLTEDVAATNAV-RALVEDSQ  117 (118)
T ss_dssp             EEECCCSCHHHHHHH-HHHHHCC-
T ss_pred             CEEEecCcHHHHHHH-HHHHHhhc
Confidence            999999999999887 78888765

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=99.11  E-value=5e-11  Score=105.86  Aligned_cols=106  Identities=16%  Similarity=0.173  Sum_probs=81.5

Q ss_pred             hhhhhhhCCCCCc-eeEEeeeecccccccCC--------CCCCEEEEeCCCHHHHHHHhhc--CcEEEeccccccccchH
Q psy1304          74 PSAYKADAPTSNL-TRLGLLGARDCLYRENL--------IDIPIIIADLKNESSILIMAKK--CRVILNCVGPYTWYGEA  142 (184)
Q Consensus        74 ~~~~La~~~~~~~-~~iaLAGrr~~lg~~~~--------~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~g~~  142 (184)
                      ++.+|++.+ + . .+|++++|+.+......        .++..+++|++|.+++++++++  +|+||||+||+..  .+
T Consensus        16 ia~~L~~~g-~-~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin~ag~~~~--~~   91 (405)
T 4ina_A           16 VAHKMAMNR-E-VFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLNIALPYQD--LT   91 (405)
T ss_dssp             HHHHHHTCT-T-TCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEECSCGGGH--HH
T ss_pred             HHHHHHhCC-C-CceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEECCCcccC--hH
Confidence            666777654 2 0 27889998764332111        2578899999999999999998  9999999999864  69


Q ss_pred             HHHHHHHcCCCEeeCCCChHH-----HHHHHHHhHHHHHHcCCeee
Q psy1304         143 VVKACIEAKTHHVDITGEPYF-----MEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       143 VaeACieAGthYVDltGE~~~-----~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++|+++|+||+|++++.+.     .....+++++.|+++|+.++
T Consensus        92 v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i  137 (405)
T 4ina_A           92 IMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMAL  137 (405)
T ss_dssp             HHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEE
T ss_pred             HHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEE
Confidence            999999999999999886432     12223689999999999876

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.72  E-value=2.3e-08  Score=91.22  Aligned_cols=101  Identities=13%  Similarity=0.024  Sum_probs=76.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCC--CCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccchHHHHHHHHcC
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENL--IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAK  151 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~--~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAG  151 (184)
                      ++.+|++. ++  .+|.+++|+.+......  .++..+.+|+.|.+++.++++++|+||||+|+...  ..++++|+++|
T Consensus        38 ia~~L~~~-~g--~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~--~~v~~a~l~~g  112 (467)
T 2axq_A           38 VIDTLAAN-DD--INVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFH--PNVVKSAIRTK  112 (467)
T ss_dssp             HHHHHHTS-TT--EEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGH--HHHHHHHHHHT
T ss_pred             HHHHHHhC-CC--CeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhh--HHHHHHHHhcC
Confidence            55666654 35  68999998754322111  24667789999999999999999999999987643  46899999999


Q ss_pred             CCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         152 THHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       152 thYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +||+|++-..+..    ..+.+.|+++|+.++
T Consensus       113 ~~vvd~~~~~p~~----~~Ll~~Ak~aGv~~i  140 (467)
T 2axq_A          113 TDVVTSSYISPAL----RELEPEIVKAGITVM  140 (467)
T ss_dssp             CEEEECSCCCHHH----HHHHHHHHHHTCEEE
T ss_pred             CEEEEeecCCHHH----HHHHHHHHHcCCEEE
Confidence            9999998754432    467789999998876

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.52  E-value=3.2e-07  Score=82.89  Aligned_cols=101  Identities=13%  Similarity=0.105  Sum_probs=74.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCC---CCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccchHHHHHHHHc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENL---IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEA  150 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~---~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieA  150 (184)
                      ++.+|++  .+  .++.+++|+.+......   ..+..+++|+.|.+++.++++++|+||||+|++..  ..+.++|+++
T Consensus        18 ia~~L~~--~G--~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~--~~i~~a~l~~   91 (450)
T 1ff9_A           18 TLDVLTD--SG--IKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH--ATVIKSAIRQ   91 (450)
T ss_dssp             HHHHHHT--TT--CEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CH--HHHHHHHHHH
T ss_pred             HHHHHHh--Cc--CEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccc--hHHHHHHHhC
Confidence            6677775  34  67888888754332222   23567888999999999999999999999987544  3588999999


Q ss_pred             CCCEeeCCCChHHHHHHHHHhHHHHHHcCCeeeC
Q psy1304         151 KTHHVDITGEPYFMEYMQYEYNTRAQESEVQKCT  184 (184)
Q Consensus       151 GthYVDltGE~~~~~~ii~~lhe~AkaaGV~Ivt  184 (184)
                      |+||+|.+-..+..    ..+.+.|+++|+.+++
T Consensus        92 g~~vvd~~~~~~~~----~~l~~aA~~aGv~~i~  121 (450)
T 1ff9_A           92 KKHVVTTSYVSPAM----MELDQAAKDAGITVMN  121 (450)
T ss_dssp             TCEEEESSCCCHHH----HHTHHHHHHTTCEEEC
T ss_pred             CCeEEEeecccHHH----HHHHHHHHHCCCeEEe
Confidence            99999997544432    4678899999998763

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.23  E-value=1.7e-06  Score=67.83  Aligned_cols=93  Identities=8%  Similarity=0.009  Sum_probs=70.5

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      .|.+.++|-|+.                ++.+|++..    -++.+..|+.........+++++++|+.|++++.+++++
T Consensus         8 lItGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   67 (227)
T 3dhn_A            8 VLIGASGFVGSA----------------LLNEALNRG----FEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKG   67 (227)
T ss_dssp             EEETCCHHHHHH----------------HHHHHHTTT----CEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTT
T ss_pred             EEEcCCchHHHH----------------HHHHHHHCC----CEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcC
Confidence            356777888887                778887654    567777777655432336789999999999999999999


Q ss_pred             CcEEEecccccccc----------chHHHHHHHHcCC-CEeeCC
Q psy1304         126 CRVILNCVGPYTWY----------GEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       126 ~dVVIN~aGPf~~~----------g~~VaeACieAGt-hYVDlt  158 (184)
                      +|+||||+|+....          ...++++|.+.|+ ++|-++
T Consensus        68 ~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  111 (227)
T 3dhn_A           68 ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG  111 (227)
T ss_dssp             CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence            99999999997322          2689999999998 566655

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=98.21  E-value=6.2e-07  Score=83.06  Aligned_cols=54  Identities=11%  Similarity=0.132  Sum_probs=41.2

Q ss_pred             CCEEEEe--CCCHHH-HHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         106 IPIIIAD--LKNESS-ILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       106 v~~v~vD--v~D~~s-L~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      +++..++  .+|.++ +.+++++.|+|||++-||  ...+++++|+++|+||+|+|.|+
T Consensus        61 ~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s~~~--~~l~Im~acleaGv~YlDTa~E~  117 (480)
T 2ph5_A           61 VSFKLQQITPQNYLEVIGSTLEENDFLIDVSIGI--SSLALIILCNQKGALYINAATEP  117 (480)
T ss_dssp             CEEEECCCCTTTHHHHTGGGCCTTCEEEECCSSS--CHHHHHHHHHHHTCEEEESSCCC
T ss_pred             CceeEEeccchhHHHHHHHHhcCCCEEEECCccc--cCHHHHHHHHHcCCCEEECCCCc
Confidence            4555554  455544 667888889999987444  35799999999999999999864

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=98.01  E-value=1.8e-05  Score=60.46  Aligned_cols=92  Identities=13%  Similarity=0.042  Sum_probs=68.1

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+.++|-|+-                ++.+|++..    .++.+..|+....... ..++.++++|+.|++++.+++++
T Consensus         8 VtGatG~iG~~----------------l~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   67 (206)
T 1hdo_A            8 IFGATGQTGLT----------------TLAQAVQAG----YEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAG   67 (206)
T ss_dssp             EESTTSHHHHH----------------HHHHHHHTT----CEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTT
T ss_pred             EEcCCcHHHHH----------------HHHHHHHCC----CeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcC
Confidence            45666777776                677777653    4666666765433221 35788999999999999999999


Q ss_pred             CcEEEeccccccc---------cchHHHHHHHHcCC-CEeeCC
Q psy1304         126 CRVILNCVGPYTW---------YGEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       126 ~dVVIN~aGPf~~---------~g~~VaeACieAGt-hYVDlt  158 (184)
                      +|+||||+|+...         ....++++|.+.|+ ++|-++
T Consensus        68 ~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~S  110 (206)
T 1hdo_A           68 QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT  110 (206)
T ss_dssp             CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            9999999997642         13688999999997 466554

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.99  E-value=4.3e-06  Score=67.66  Aligned_cols=94  Identities=13%  Similarity=-0.024  Sum_probs=68.6

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+.++|-|+.                ++.+|++.+|+  .++....|+...... ...+++++.+|+.|++++.+++++
T Consensus         5 VtGatG~iG~~----------------l~~~L~~~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~   66 (287)
T 2jl1_A            5 VTGATGQLGGL----------------VIQHLLKKVPA--SQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAG   66 (287)
T ss_dssp             ETTTTSHHHHH----------------HHHHHTTTSCG--GGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTT
T ss_pred             EEcCCchHHHH----------------HHHHHHHhCCC--CeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhc
Confidence            45667787777                77788776556  666666665432210 014678999999999999999999


Q ss_pred             CcEEEeccccccc------cchHHHHHHHHcCC-CEeeCC
Q psy1304         126 CRVILNCVGPYTW------YGEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       126 ~dVVIN~aGPf~~------~g~~VaeACieAGt-hYVDlt  158 (184)
                      +|+||||+|+...      ...+++++|.++|+ ++|-++
T Consensus        67 ~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~S  106 (287)
T 2jl1_A           67 VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTG  106 (287)
T ss_dssp             CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred             CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence            9999999997432      12688999999998 555544

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.99  E-value=2.9e-05  Score=61.01  Aligned_cols=92  Identities=12%  Similarity=0.026  Sum_probs=68.5

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhh-hCCCCCceeEEeeeeccc-cccc---CCCCCCEEEEeCCCHHHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKA-DAPTSNLTRLGLLGARDC-LYRE---NLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La-~~~~~~~~~iaLAGrr~~-lg~~---~~~~v~~v~vDv~D~~sL~a  121 (184)
                      |.+.++|-|+-                ++.+|+ +.  +  .++.+..|+.+ ...+   ...++.++++|+.|++++.+
T Consensus        10 VtGasg~iG~~----------------~~~~l~~~~--g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~   69 (221)
T 3r6d_A           10 ILGAAGQIAQX----------------LTATLLTYT--D--MHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQ   69 (221)
T ss_dssp             EESTTSHHHHH----------------HHHHHHHHC--C--CEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHH
T ss_pred             EEeCCcHHHHH----------------HHHHHHhcC--C--ceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHH
Confidence            45566677766                777777 53  4  67777778765 3321   23678899999999999999


Q ss_pred             HhhcCcEEEeccccccccchHHHHHHHHcCC-CEeeCC
Q psy1304         122 MAKKCRVILNCVGPYTWYGEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       122 ~l~~~dVVIN~aGPf~~~g~~VaeACieAGt-hYVDlt  158 (184)
                      +++++|+|||++|+.......++++|.+.|+ ++|-++
T Consensus        70 ~~~~~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iS  107 (221)
T 3r6d_A           70 AVTNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVS  107 (221)
T ss_dssp             HHTTCSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             HHcCCCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEe
Confidence            9999999999999742225788999999997 466654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.97  E-value=1.5e-05  Score=64.87  Aligned_cols=91  Identities=9%  Similarity=-0.084  Sum_probs=66.9

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+.++|-|+-                ++.+|++. ++  .+|.+..|+...... ...+++++.+|+.|++++.+++++
T Consensus         5 VtGatG~iG~~----------------l~~~L~~~-~g--~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~   65 (289)
T 3e48_A            5 LTGATGHLGTH----------------ITNQAIAN-HI--DHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKG   65 (289)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHT-TC--TTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTT
T ss_pred             EEcCCchHHHH----------------HHHHHhhC-CC--CcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhC
Confidence            45677888877                77777765 23  455566676543221 125789999999999999999999


Q ss_pred             CcEEEecccccccc------chHHHHHHHHcCCC-Eee
Q psy1304         126 CRVILNCVGPYTWY------GEAVVKACIEAKTH-HVD  156 (184)
Q Consensus       126 ~dVVIN~aGPf~~~------g~~VaeACieAGth-YVD  156 (184)
                      +|+||||+|+....      -.+++++|.++|+. +|-
T Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~  103 (289)
T 3e48_A           66 MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIF  103 (289)
T ss_dssp             CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEE
Confidence            99999999976432      26899999999975 443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.92  E-value=2.6e-05  Score=61.18  Aligned_cols=93  Identities=11%  Similarity=-0.043  Sum_probs=68.8

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|+-                ++.+|++.+++  .++.+..|+.........++.++.+|+.|++++.++++++
T Consensus         9 VtGasG~iG~~----------------l~~~l~~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   70 (253)
T 1xq6_A            9 VTGASGRTGQI----------------VYKKLKEGSDK--FVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI   70 (253)
T ss_dssp             EESTTSHHHHH----------------HHHHHHHTTTT--CEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTC
T ss_pred             EEcCCcHHHHH----------------HHHHHHhcCCC--cEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCC
Confidence            45666777776                77888877656  6777777765432222356889999999999999999999


Q ss_pred             cEEEeccccccc-------------------------c----chHHHHHHHHcCCC-EeeC
Q psy1304         127 RVILNCVGPYTW-------------------------Y----GEAVVKACIEAKTH-HVDI  157 (184)
Q Consensus       127 dVVIN~aGPf~~-------------------------~----g~~VaeACieAGth-YVDl  157 (184)
                      |+||||+|+...                         .    ...++++|.+.|+. +|-+
T Consensus        71 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~  131 (253)
T 1xq6_A           71 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVV  131 (253)
T ss_dssp             SEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEE
T ss_pred             CEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEE
Confidence            999999996421                         0    16788999998874 5543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.91  E-value=2.2e-05  Score=61.59  Aligned_cols=91  Identities=10%  Similarity=0.003  Sum_probs=69.9

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCC-HHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKN-ESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D-~~sL~a~l~~  125 (184)
                      |.+.++|-|+-                ++.+|++..    .++.+..|+..... ...+++++++|+.| ++++.+++++
T Consensus         5 ItGatG~iG~~----------------l~~~L~~~g----~~V~~~~R~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~   63 (219)
T 3dqp_A            5 IVGSTGRVGKS----------------LLKSLSTTD----YQIYAGARKVEQVP-QYNNVKAVHFDVDWTPEEMAKQLHG   63 (219)
T ss_dssp             EESTTSHHHHH----------------HHHHHTTSS----CEEEEEESSGGGSC-CCTTEEEEECCTTSCHHHHHTTTTT
T ss_pred             EECCCCHHHHH----------------HHHHHHHCC----CEEEEEECCccchh-hcCCceEEEecccCCHHHHHHHHcC
Confidence            45667777776                677777653    56777777765433 23778999999999 9999999999


Q ss_pred             CcEEEecccccccc--------chHHHHHHHHcCC-CEeeCC
Q psy1304         126 CRVILNCVGPYTWY--------GEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       126 ~dVVIN~aGPf~~~--------g~~VaeACieAGt-hYVDlt  158 (184)
                      +|+||||+|+....        ...++++|.+.|+ ++|-++
T Consensus        64 ~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~S  105 (219)
T 3dqp_A           64 MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLS  105 (219)
T ss_dssp             CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEEC
Confidence            99999999976421        2689999999997 466555

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.81  E-value=5.8e-05  Score=60.29  Aligned_cols=82  Identities=11%  Similarity=0.105  Sum_probs=60.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccc--cchHHHHHHHHc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTW--YGEAVVKACIEA  150 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~--~g~~VaeACieA  150 (184)
                      ++.+|++.. .  .++.+..|+....... ..++.++++|+.|++++.++++++|+||||+|+...  ....++++|.+.
T Consensus        39 l~~~L~~~G-~--~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~  115 (236)
T 3qvo_A           39 VINQLADKQ-T--IKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKAC  115 (236)
T ss_dssp             HHHHHTTCT-T--EEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCC-C--ceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHc
Confidence            666666554 2  5677777776543321 256889999999999999999999999999997432  236789999999


Q ss_pred             CCC-EeeCC
Q psy1304         151 KTH-HVDIT  158 (184)
Q Consensus       151 Gth-YVDlt  158 (184)
                      |+. +|-++
T Consensus       116 ~~~~iV~iS  124 (236)
T 3qvo_A          116 DVKRLIFVL  124 (236)
T ss_dssp             TCCEEEEEC
T ss_pred             CCCEEEEEe
Confidence            975 65554

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.81  E-value=2.1e-05  Score=63.40  Aligned_cols=93  Identities=11%  Similarity=-0.000  Sum_probs=64.6

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+.++|-|+-                ++.+|.+..++  .++.+..|+...... ...+++++.+|+.|++++.+++++
T Consensus         4 VtGatG~iG~~----------------l~~~L~~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   65 (286)
T 2zcu_A            4 ITGATGQLGHY----------------VIESLMKTVPA--SQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQG   65 (286)
T ss_dssp             EESTTSHHHHH----------------HHHHHTTTSCG--GGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTT
T ss_pred             EEcCCchHHHH----------------HHHHHHhhCCC--ceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhC
Confidence            45566777776                67777766555  566666665432210 014678999999999999999999


Q ss_pred             CcEEEecccccc----ccchHHHHHHHHcCCC-EeeC
Q psy1304         126 CRVILNCVGPYT----WYGEAVVKACIEAKTH-HVDI  157 (184)
Q Consensus       126 ~dVVIN~aGPf~----~~g~~VaeACieAGth-YVDl  157 (184)
                      +|+||||+|+..    .....++++|.++|+. +|-+
T Consensus        66 ~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~  102 (286)
T 2zcu_A           66 VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYT  102 (286)
T ss_dssp             CSEEEECC--------CHHHHHHHHHHHHTCCEEEEE
T ss_pred             CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEE
Confidence            999999999642    2237899999999974 5544

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.79  E-value=3.3e-05  Score=63.71  Aligned_cols=90  Identities=8%  Similarity=0.025  Sum_probs=66.5

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc-c-----cccc----CCCCCCEEEEeCCC
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD-C-----LYRE----NLIDIPIIIADLKN  115 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~-~-----lg~~----~~~~v~~v~vDv~D  115 (184)
                      .|.+.++|-|+.                ++.+|++..    .++.+..|+. .     ....    ...+++++++|++|
T Consensus         8 lVtGatG~iG~~----------------l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d   67 (321)
T 3c1o_A            8 IIYGGTGYIGKF----------------MVRASLSFS----HPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEE   67 (321)
T ss_dssp             EEETTTSTTHHH----------------HHHHHHHTT----CCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred             EEEcCCchhHHH----------------HHHHHHhCC----CcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCC
Confidence            346677888877                778888754    3455555654 1     1000    11568899999999


Q ss_pred             HHHHHHHhhcCcEEEecccccc-ccchHHHHHHHHcC-CC-Ee
Q psy1304         116 ESSILIMAKKCRVILNCVGPYT-WYGEAVVKACIEAK-TH-HV  155 (184)
Q Consensus       116 ~~sL~a~l~~~dVVIN~aGPf~-~~g~~VaeACieAG-th-YV  155 (184)
                      ++++.++++++|+||||+|+.. .....++++|.++| +. +|
T Consensus        68 ~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           68 HEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             HHHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             HHHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            9999999999999999999763 44589999999999 64 44

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.77  E-value=5e-05  Score=61.90  Aligned_cols=87  Identities=13%  Similarity=0.077  Sum_probs=63.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc-------ccccc----CCCCCCEEEEeCCC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD-------CLYRE----NLIDIPIIIADLKN  115 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~-------~lg~~----~~~~v~~v~vDv~D  115 (184)
                      |.+.++|-|+.                ++.+|++..-    ++.+..|+.       +....    ...+++++++|+.|
T Consensus         7 VtGatG~iG~~----------------l~~~L~~~g~----~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d   66 (307)
T 2gas_A            7 ILGPTGAIGRH----------------IVWASIKAGN----PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND   66 (307)
T ss_dssp             EESTTSTTHHH----------------HHHHHHHHTC----CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred             EECCCchHHHH----------------HHHHHHhCCC----cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC
Confidence            46667777777                7788886542    344444654       11000    01468899999999


Q ss_pred             HHHHHHHhhcCcEEEecccccc-ccchHHHHHHHHcC-CC
Q psy1304         116 ESSILIMAKKCRVILNCVGPYT-WYGEAVVKACIEAK-TH  153 (184)
Q Consensus       116 ~~sL~a~l~~~dVVIN~aGPf~-~~g~~VaeACieAG-th  153 (184)
                      ++++.++++++|+||||+|+.. ....+++++|.++| +.
T Consensus        67 ~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~  106 (307)
T 2gas_A           67 HETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVK  106 (307)
T ss_dssp             HHHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCS
T ss_pred             HHHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcCCce
Confidence            9999999999999999999764 33478999999999 75

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.76  E-value=5.1e-05  Score=62.04  Aligned_cols=90  Identities=13%  Similarity=0.083  Sum_probs=65.6

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc-----cc----cCCCCCCEEEEeCCCH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL-----YR----ENLIDIPIIIADLKNE  116 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l-----g~----~~~~~v~~v~vDv~D~  116 (184)
                      .|.+.++|-|+.                ++.+|.+..    .++.+..|+...     ..    -...+++++++|+.|+
T Consensus         8 lVtGatG~iG~~----------------l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~   67 (313)
T 1qyd_A            8 LIVGGTGYIGKR----------------IVNASISLG----HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDH   67 (313)
T ss_dssp             EEESTTSTTHHH----------------HHHHHHHTT----CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCH
T ss_pred             EEEcCCcHHHHH----------------HHHHHHhCC----CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCH
Confidence            346777888877                778888764    345455565311     00    0125688999999999


Q ss_pred             HHHHHHhhcCcEEEecccccc-----ccchHHHHHHHHcC-CC-Ee
Q psy1304         117 SSILIMAKKCRVILNCVGPYT-----WYGEAVVKACIEAK-TH-HV  155 (184)
Q Consensus       117 ~sL~a~l~~~dVVIN~aGPf~-----~~g~~VaeACieAG-th-YV  155 (184)
                      +++.++++++|+||||+|+..     ....+++++|.++| +. +|
T Consensus        68 ~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           68 QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             HHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             HHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            999999999999999999762     23378999999999 65 44

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.75  E-value=4.9e-05  Score=62.01  Aligned_cols=88  Identities=15%  Similarity=0.120  Sum_probs=64.3

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc----------ccCCCCCCEEEEeCCC
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY----------RENLIDIPIIIADLKN  115 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg----------~~~~~~v~~v~vDv~D  115 (184)
                      .|.+.++|-|+.                ++.+|++..-    ++.+..|+....          .-...+++++++|++|
T Consensus         8 lVtGatG~iG~~----------------l~~~L~~~g~----~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d   67 (308)
T 1qyc_A            8 LLIGATGYIGRH----------------VAKASLDLGH----PTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD   67 (308)
T ss_dssp             EEESTTSTTHHH----------------HHHHHHHTTC----CEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTC
T ss_pred             EEEcCCcHHHHH----------------HHHHHHhCCC----CEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCC
Confidence            356777888877                7788887642    343444542110          0012568899999999


Q ss_pred             HHHHHHHhhcCcEEEecccccc-ccchHHHHHHHHcC-CC
Q psy1304         116 ESSILIMAKKCRVILNCVGPYT-WYGEAVVKACIEAK-TH  153 (184)
Q Consensus       116 ~~sL~a~l~~~dVVIN~aGPf~-~~g~~VaeACieAG-th  153 (184)
                      +++|.++++++|+||||+|+.. .....++++|.++| +.
T Consensus        68 ~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~  107 (308)
T 1qyc_A           68 HASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVK  107 (308)
T ss_dssp             HHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCS
T ss_pred             HHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCc
Confidence            9999999999999999999764 33479999999999 65

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.73  E-value=4.7e-05  Score=62.83  Aligned_cols=88  Identities=10%  Similarity=0.031  Sum_probs=65.0

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc-cccc----CCCCCCEEEEeCCCHHHHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC-LYRE----NLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~-lg~~----~~~~v~~v~vDv~D~~sL~  120 (184)
                      .|.+.++|-|+.                ++.+|.+..    .++.+..|+.. ....    ...+++++++|++|+++|.
T Consensus        15 lVtGatG~iG~~----------------l~~~L~~~g----~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~   74 (318)
T 2r6j_A           15 LIFGGTGYIGNH----------------MVKGSLKLG----HPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLV   74 (318)
T ss_dssp             EEETTTSTTHHH----------------HHHHHHHTT----CCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHH
T ss_pred             EEECCCchHHHH----------------HHHHHHHCC----CcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHH
Confidence            456777888887                778888764    33444456542 1100    1146889999999999999


Q ss_pred             HHhhcCcEEEecccccc-ccchHHHHHHHHcC-CC
Q psy1304         121 IMAKKCRVILNCVGPYT-WYGEAVVKACIEAK-TH  153 (184)
Q Consensus       121 a~l~~~dVVIN~aGPf~-~~g~~VaeACieAG-th  153 (184)
                      ++++++|+||||+|+.. ....+++++|.++| +.
T Consensus        75 ~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~  109 (318)
T 2r6j_A           75 ELMKKVDVVISALAFPQILDQFKILEAIKVAGNIK  109 (318)
T ss_dssp             HHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCC
T ss_pred             HHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCC
Confidence            99999999999999763 33479999999998 65

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=97.71  E-value=4.3e-05  Score=63.38  Aligned_cols=95  Identities=11%  Similarity=0.108  Sum_probs=69.4

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc----cC--CCCCCEEEEeCCCHHHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR----EN--LIDIPIIIADLKNESSI  119 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~----~~--~~~v~~v~vDv~D~~sL  119 (184)
                      .|-+.++|=|+-                ++.+|++..++  .+|.+..|+...+.    ..  ..++.++.+|+.|++++
T Consensus         8 lVTGatG~iG~~----------------l~~~L~~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   69 (348)
T 1oc2_A            8 IVTGGAGFIGSN----------------FVHYVYNNHPD--VHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELV   69 (348)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHHCTT--CEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHH
T ss_pred             EEeCCccHHHHH----------------HHHHHHHhCCC--CEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHH
Confidence            356778888887                77888877666  66766666432110    01  14678899999999999


Q ss_pred             HHHhhcCcEEEecccccccc----------------chHHHHHHHHcCCCEeeCC
Q psy1304         120 LIMAKKCRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       120 ~a~l~~~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDlt  158 (184)
                      .++++++|+||||+|+....                -..++++|.+.|+++|-++
T Consensus        70 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~S  124 (348)
T 1oc2_A           70 DKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVS  124 (348)
T ss_dssp             HHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEE
T ss_pred             HHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEec
Confidence            99999999999999976311                1578899999888766543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.65  E-value=9.1e-05  Score=62.13  Aligned_cols=88  Identities=17%  Similarity=0.116  Sum_probs=65.9

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNES  117 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~  117 (184)
                      .|.+.++|-|+.                ++.+|.+..-    ++.+..|+......        ...+++++.+|+.|++
T Consensus        14 lVtGatG~iG~~----------------l~~~L~~~g~----~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~   73 (346)
T 3i6i_A           14 LIAGATGFIGQF----------------VATASLDAHR----PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQE   73 (346)
T ss_dssp             EEECTTSHHHHH----------------HHHHHHHTTC----CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHH
T ss_pred             EEECCCcHHHHH----------------HHHHHHHCCC----CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHH
Confidence            457788899988                7888887653    34444454411000        0157899999999999


Q ss_pred             HHHHHhh--cCcEEEecccccccc-chHHHHHHHHcC-CC
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWY-GEAVVKACIEAK-TH  153 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~-g~~VaeACieAG-th  153 (184)
                      ++.++++  ++|+||||+|+.... ..+++++|.++| +.
T Consensus        74 ~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~  113 (346)
T 3i6i_A           74 AMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIK  113 (346)
T ss_dssp             HHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCS
T ss_pred             HHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCce
Confidence            9999999  999999999975333 379999999999 76

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=97.63  E-value=0.00011  Score=60.95  Aligned_cols=88  Identities=11%  Similarity=0.042  Sum_probs=66.0

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      .|.+.++|-|+-                ++.+|++..    .+|....|+...     .+++++++|+.|++++.+++++
T Consensus        23 lVtGatG~iG~~----------------l~~~L~~~G----~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~   77 (347)
T 4id9_A           23 LVTGSAGRVGRA----------------VVAALRTQG----RTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMG   77 (347)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHTT----CCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTT
T ss_pred             EEECCCChHHHH----------------HHHHHHhCC----CEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhC
Confidence            346777787777                777888664    345455555432     5689999999999999999999


Q ss_pred             CcEEEeccccccccc--------------hHHHHHHHHcCC-CEeeCC
Q psy1304         126 CRVILNCVGPYTWYG--------------EAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       126 ~dVVIN~aGPf~~~g--------------~~VaeACieAGt-hYVDlt  158 (184)
                      +|+||||+|+.....              ..++++|.+.|+ ++|-++
T Consensus        78 ~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~S  125 (347)
T 4id9_A           78 VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFAS  125 (347)
T ss_dssp             CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEE
T ss_pred             CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEC
Confidence            999999999764322              568999999998 455433

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.62  E-value=2.8e-05  Score=60.61  Aligned_cols=90  Identities=7%  Similarity=-0.075  Sum_probs=66.5

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+.++|-|+.                ++.+|++..    -++.+..|+...... ...+++++++|+.|+++  +.+++
T Consensus         5 VtGatG~iG~~----------------l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~   62 (224)
T 3h2s_A            5 VLGATGRAGSA----------------IVAEARRRG----HEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDS   62 (224)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTT
T ss_pred             EEcCCCHHHHH----------------HHHHHHHCC----CEEEEEEecccccccccCCCceEEecccccccH--hhccc
Confidence            45677788877                778888763    566666676543221 12578999999999888  88899


Q ss_pred             CcEEEeccccccc---------cchHHHHHHHHcCCCEeeCC
Q psy1304         126 CRVILNCVGPYTW---------YGEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       126 ~dVVIN~aGPf~~---------~g~~VaeACieAGthYVDlt  158 (184)
                      +|+||||+|+.+.         ....++++|.+.|.++|-++
T Consensus        63 ~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  104 (224)
T 3h2s_A           63 VDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL  104 (224)
T ss_dssp             CSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred             CCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence            9999999998521         12788999999997777664

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=97.57  E-value=0.00013  Score=60.26  Aligned_cols=93  Identities=11%  Similarity=0.134  Sum_probs=63.2

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHHHHHHhh
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .|.+.++|-|+-                ++.+|++..    -++.+..|+....... ..+++++.+|+.|++++.++++
T Consensus        17 lVtGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~   76 (342)
T 2x4g_A           17 AVLGATGLLGHH----------------AARAIRAAG----HDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALR   76 (342)
T ss_dssp             EEESTTSHHHHH----------------HHHHHHHTT----CEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTT
T ss_pred             EEECCCcHHHHH----------------HHHHHHHCC----CEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHc
Confidence            346778888887                777887653    4565666654322111 1368899999999999999999


Q ss_pred             cCcEEEecccccccc--------------chHHHHHHHHcCC-CEeeCC
Q psy1304         125 KCRVILNCVGPYTWY--------------GEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       125 ~~dVVIN~aGPf~~~--------------g~~VaeACieAGt-hYVDlt  158 (184)
                      ++|+||||+|+....              -..++++|.+.|+ ++|-++
T Consensus        77 ~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~S  125 (342)
T 2x4g_A           77 GLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVG  125 (342)
T ss_dssp             TCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEEC
T ss_pred             CCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEC
Confidence            999999999975421              1589999999996 565443

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=97.56  E-value=0.00013  Score=60.49  Aligned_cols=94  Identities=11%  Similarity=0.070  Sum_probs=67.3

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc----c---CCCCCCEEEEeCCCHHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR----E---NLIDIPIIIADLKNESS  118 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~----~---~~~~v~~v~vDv~D~~s  118 (184)
                      .|.+.++|-|+-                ++.+|.+..++  .++....|+.....    .   ...+++++++|+.|+++
T Consensus        28 lVtGatG~iG~~----------------l~~~L~~~g~~--~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~   89 (346)
T 4egb_A           28 LVTGGAGFIGSN----------------FVHYMLQSYET--YKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGEL   89 (346)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHHCTT--EEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred             EEECCccHHHHH----------------HHHHHHhhCCC--cEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHH
Confidence            346777888877                77888887766  66655544321110    0   11468899999999999


Q ss_pred             HHHHhhc--CcEEEecccccccc----------------chHHHHHHHHcCCC-EeeC
Q psy1304         119 ILIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEAKTH-HVDI  157 (184)
Q Consensus       119 L~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieAGth-YVDl  157 (184)
                      +.+++++  +|+||||+|+....                ...++++|.+.|+. +|-+
T Consensus        90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~  147 (346)
T 4egb_A           90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQV  147 (346)
T ss_dssp             HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEE
T ss_pred             HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence            9999998  99999999976422                16799999999987 5543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=97.55  E-value=9.8e-05  Score=62.09  Aligned_cols=94  Identities=19%  Similarity=0.124  Sum_probs=68.7

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--CCCCCCEEEEeCC-CHHHHHHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--NLIDIPIIIADLK-NESSILIM  122 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--~~~~v~~v~vDv~-D~~sL~a~  122 (184)
                      .|.+.++|-|+-                ++.+|.+. ++  -+|....|+......  ...+++++++|+. |++++.++
T Consensus        28 lVtGatG~iG~~----------------l~~~L~~~-~g--~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~   88 (372)
T 3slg_A           28 LILGVNGFIGHH----------------LSKRILET-TD--WEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYH   88 (372)
T ss_dssp             EEESCSSHHHHH----------------HHHHHHHH-SS--CEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHH
T ss_pred             EEECCCChHHHH----------------HHHHHHhC-CC--CEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHH
Confidence            456777888877                77778765 34  456666665432211  1267899999999 99999999


Q ss_pred             hhcCcEEEecccccccc----------------chHHHHHHHHcCCCEeeCC
Q psy1304         123 AKKCRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       123 l~~~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDlt  158 (184)
                      ++++|+||||+|.....                ...++++|.+.|.++|-++
T Consensus        89 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~S  140 (372)
T 3slg_A           89 VKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS  140 (372)
T ss_dssp             HHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEEC
T ss_pred             hccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeC
Confidence            99999999999965421                1578999999997776554

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=97.49  E-value=0.00026  Score=57.59  Aligned_cols=78  Identities=14%  Similarity=-0.026  Sum_probs=58.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccc------------h
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYG------------E  141 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g------------~  141 (184)
                      ++..|++.  +  -++.+..|+.....  ..++.++.+|+.|++++.++++++|+|||++|......            .
T Consensus        19 la~~L~~~--G--~~V~~~~r~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~   92 (267)
T 3rft_A           19 MRERLAPM--A--EILRLADLSPLDPA--GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLY   92 (267)
T ss_dssp             HHHHTGGG--E--EEEEEEESSCCCCC--CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHHHTHHHH
T ss_pred             HHHHHHhc--C--CEEEEEecCCcccc--CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCCHHHHHHHHHHHHH
Confidence            55555543  2  57777777665432  36788999999999999999999999999999753322            4


Q ss_pred             HHHHHHHHcCC-CEeeC
Q psy1304         142 AVVKACIEAKT-HHVDI  157 (184)
Q Consensus       142 ~VaeACieAGt-hYVDl  157 (184)
                      .++++|.+.|. +.|-+
T Consensus        93 ~l~~a~~~~~~~~iv~~  109 (267)
T 3rft_A           93 NLYEAARAHGQPRIVFA  109 (267)
T ss_dssp             HHHHHHHHTTCCEEEEE
T ss_pred             HHHHHHHHcCCCEEEEE
Confidence            78899999987 45544

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=97.48  E-value=0.00022  Score=59.38  Aligned_cols=80  Identities=10%  Similarity=0.039  Sum_probs=55.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc---cCCCCCCEEEEeCCCHHHHHHHhh--cCcEEEeccccccc----------
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR---ENLIDIPIIIADLKNESSILIMAK--KCRVILNCVGPYTW----------  138 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~---~~~~~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~----------  138 (184)
                      ++.+|++.  +  -+|.+..|+.....   ....++.++.+|+.|++++.++++  ++|+||||||+...          
T Consensus        36 l~~~L~~~--g--~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~  111 (330)
T 2pzm_A           36 LIEHWLPQ--G--HEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAAT  111 (330)
T ss_dssp             HHHHHGGG--T--CEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHH
T ss_pred             HHHHHHHC--C--CEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccCCCccccChhHHH
Confidence            45555544  3  46666666432211   122567899999999999999999  99999999997642          


Q ss_pred             --c-chHHHHHHHHcCC-CEeeC
Q psy1304         139 --Y-GEAVVKACIEAKT-HHVDI  157 (184)
Q Consensus       139 --~-g~~VaeACieAGt-hYVDl  157 (184)
                        . -..++++|.+.|+ ++|-+
T Consensus       112 N~~~~~~l~~a~~~~~~~~iV~~  134 (330)
T 2pzm_A          112 NVQGSINVAKAASKAGVKRLLNF  134 (330)
T ss_dssp             HTHHHHHHHHHHHHHTCSEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEe
Confidence              0 1578999999987 45543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.46  E-value=6.4e-05  Score=59.39  Aligned_cols=83  Identities=12%  Similarity=0.118  Sum_probs=58.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccc-------------c
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTW-------------Y  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~-------------~  139 (184)
                      ++.+|++....  .++.+.+|+...... ...++.++.+|+.|++++.++++++|+||||+|+...             .
T Consensus        34 l~~~L~~~G~~--~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~  111 (242)
T 2bka_A           34 LLKEILEQGLF--SKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDY  111 (242)
T ss_dssp             HHHHHHHHTCC--SEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHcCCCC--CEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcccccCCcccceeeeHHH
Confidence            67777765431  166677776543211 1145788999999999999999999999999997532             1


Q ss_pred             chHHHHHHHHcCC-CEeeCC
Q psy1304         140 GEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       140 g~~VaeACieAGt-hYVDlt  158 (184)
                      -..++++|.+.|+ ++|-++
T Consensus       112 ~~~~~~~~~~~~~~~iv~~S  131 (242)
T 2bka_A          112 VLKSAELAKAGGCKHFNLLS  131 (242)
T ss_dssp             HHHHHHHHHHTTCCEEEEEC
T ss_pred             HHHHHHHHHHCCCCEEEEEc
Confidence            2578889999887 465554

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=97.45  E-value=6e-05  Score=61.44  Aligned_cols=92  Identities=10%  Similarity=-0.128  Sum_probs=65.6

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      |.+.++|-|+.                ++.+|++.+++  -++.+..|+..... ...+++++.+|+.|++++.++++  
T Consensus         7 VtGatG~iG~~----------------l~~~L~~~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~   67 (312)
T 2yy7_A            7 IIGACGQIGTE----------------LTQKLRKLYGT--ENVIASDIRKLNTD-VVNSGPFEVVNALDFNQIEHLVEVH   67 (312)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHHHCG--GGEEEEESCCCSCH-HHHSSCEEECCTTCHHHHHHHHHHT
T ss_pred             EECCccHHHHH----------------HHHHHHHhCCC--CEEEEEcCCCcccc-ccCCCceEEecCCCHHHHHHHHhhc
Confidence            46677888877                67777765334  45555556543211 11457899999999999999999  


Q ss_pred             cCcEEEecccccccc---------------chHHHHHHHHcCC-CEeeC
Q psy1304         125 KCRVILNCVGPYTWY---------------GEAVVKACIEAKT-HHVDI  157 (184)
Q Consensus       125 ~~dVVIN~aGPf~~~---------------g~~VaeACieAGt-hYVDl  157 (184)
                      ++|+||||+|+....               -..++++|.+.|+ ++|-+
T Consensus        68 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~  116 (312)
T 2yy7_A           68 KITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWP  116 (312)
T ss_dssp             TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECC
T ss_pred             CCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence            899999999975321               1478999999998 55543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=97.44  E-value=0.00024  Score=60.58  Aligned_cols=79  Identities=6%  Similarity=-0.072  Sum_probs=56.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhcCcEEEecccccccc-------------
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWY-------------  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~-------------  139 (184)
                      ++.+|++..    -+|.+..|+...... ...+++++.+|+.|++++.++++++|+||||+|+....             
T Consensus        45 l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~  120 (379)
T 2c5a_A           45 IARRLKHEG----HYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYN  120 (379)
T ss_dssp             HHHHHHHTT----CEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHH
T ss_pred             HHHHHHHCC----CeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCcccccccCHHHHHHH
Confidence            666676653    455556565432211 12468899999999999999999999999999975321             


Q ss_pred             ----chHHHHHHHHcCC-CEee
Q psy1304         140 ----GEAVVKACIEAKT-HHVD  156 (184)
Q Consensus       140 ----g~~VaeACieAGt-hYVD  156 (184)
                          ...++++|.+.|+ ++|-
T Consensus       121 Nv~g~~~ll~a~~~~~~~~~V~  142 (379)
T 2c5a_A          121 NTMISFNMIEAARINGIKRFFY  142 (379)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCEEEE
Confidence                1478999999998 4543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=97.44  E-value=0.00024  Score=59.73  Aligned_cols=83  Identities=7%  Similarity=-0.035  Sum_probs=59.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccc--------------ccccCCCCCCEEEEeCCCHHHHHHH-hhcCcEEEeccccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDC--------------LYRENLIDIPIIIADLKNESSILIM-AKKCRVILNCVGPYTW  138 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~--------------lg~~~~~~v~~v~vDv~D~~sL~a~-l~~~dVVIN~aGPf~~  138 (184)
                      ++.+|++.+.+  .+|.+..|+..              .......++.++++|+.|++++.++ ..++|+||||||+...
T Consensus        26 l~~~L~~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~  103 (362)
T 3sxp_A           26 LAFHFQENHPK--AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDT  103 (362)
T ss_dssp             HHHHHHHHCTT--SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSCCSEEEECCCCCGG
T ss_pred             HHHHHHhhCCC--CeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccCCCEEEECCccCCc
Confidence            66777764455  67777666432              0011124578999999999999999 8999999999996542


Q ss_pred             c--------------chHHHHHHHHcCCCEeeCC
Q psy1304         139 Y--------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       139 ~--------------g~~VaeACieAGthYVDlt  158 (184)
                      .              -..++++|.+.|+.+|-++
T Consensus       104 ~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~S  137 (362)
T 3sxp_A          104 TMLNQELVMKTNYQAFLNLLEIARSKKAKVIYAS  137 (362)
T ss_dssp             GCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeC
Confidence            1              1578999999998866655

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=97.41  E-value=0.00018  Score=58.88  Aligned_cols=88  Identities=15%  Similarity=0.049  Sum_probs=63.2

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      |.+.++|-|+-                ++.+|++..++  -++.+..|+....    .++.++.+|+.|++++.++++  
T Consensus         4 VtGatG~iG~~----------------l~~~L~~~~~g--~~V~~~~r~~~~~----~~~~~~~~D~~d~~~~~~~~~~~   61 (317)
T 3ajr_A            4 VTGSSGQIGTE----------------LVPYLAEKYGK--KNVIASDIVQRDT----GGIKFITLDVSNRDEIDRAVEKY   61 (317)
T ss_dssp             EESTTSTTHHH----------------HHHHHHHHHCG--GGEEEEESSCCCC----TTCCEEECCTTCHHHHHHHHHHT
T ss_pred             EEcCCcHHHHH----------------HHHHHHHhcCC--CEEEEecCCCccc----cCceEEEecCCCHHHHHHHHhhc
Confidence            45667777777                77778765334  4455555554321    257899999999999999998  


Q ss_pred             cCcEEEecccccccc---------------chHHHHHHHHcCC-CEee
Q psy1304         125 KCRVILNCVGPYTWY---------------GEAVVKACIEAKT-HHVD  156 (184)
Q Consensus       125 ~~dVVIN~aGPf~~~---------------g~~VaeACieAGt-hYVD  156 (184)
                      ++|+||||+|+....               -..++++|.+.|+ ++|-
T Consensus        62 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~  109 (317)
T 3ajr_A           62 SIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVI  109 (317)
T ss_dssp             TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEE
Confidence            899999999975321               1578899999998 4543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.41  E-value=0.00011  Score=60.11  Aligned_cols=94  Identities=6%  Similarity=0.010  Sum_probs=65.9

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc-c--CCCCCCEEEEeCCCHHHHHHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR-E--NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~-~--~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      .|.+.++|-|+-                ++.+|++.. +  .+|....|+..... .  ...+++++.+|+.|++++.++
T Consensus         9 lVtGatG~iG~~----------------l~~~L~~~g-~--~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~   69 (299)
T 2wm3_A            9 VVFGGTGAQGGS----------------VARTLLEDG-T--FKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELA   69 (299)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHHC-S--SEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred             EEECCCchHHHH----------------HHHHHHhcC-C--ceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence            446677787777                677777654 2  34555556543210 0  114688999999999999999


Q ss_pred             hhcCcEEEeccccccc--------cchHHHHHHHHcCCC-EeeCC
Q psy1304         123 AKKCRVILNCVGPYTW--------YGEAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       123 l~~~dVVIN~aGPf~~--------~g~~VaeACieAGth-YVDlt  158 (184)
                      ++++|+||||+|++..        ....++++|.++|+. +|-++
T Consensus        70 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S  114 (299)
T 2wm3_A           70 LNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSG  114 (299)
T ss_dssp             HTTCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECC
T ss_pred             HhcCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence            9999999999986432        236889999999984 55443

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.40  E-value=0.00014  Score=60.45  Aligned_cols=91  Identities=12%  Similarity=-0.038  Sum_probs=63.7

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------CC------CCCCEEEEeCC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------NL------IDIPIIIADLK  114 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~------~~v~~v~vDv~  114 (184)
                      |.+.++|-|+-                ++.+|.+..    -++....|+......      ..      .+++++++|+.
T Consensus        30 VtGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   89 (351)
T 3ruf_A           30 ITGVAGFIGSN----------------LLEKLLKLN----QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIR   89 (351)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTT
T ss_pred             EECCCcHHHHH----------------HHHHHHHCC----CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCC
Confidence            46667777776                677777654    345555554321110      00      56889999999


Q ss_pred             CHHHHHHHhhcCcEEEecccccccc----------------chHHHHHHHHcCC-CEeeC
Q psy1304         115 NESSILIMAKKCRVILNCVGPYTWY----------------GEAVVKACIEAKT-HHVDI  157 (184)
Q Consensus       115 D~~sL~a~l~~~dVVIN~aGPf~~~----------------g~~VaeACieAGt-hYVDl  157 (184)
                      |++++.++++++|+||||+|+....                ...++++|.+.|+ ++|-+
T Consensus        90 d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~  149 (351)
T 3ruf_A           90 DLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYA  149 (351)
T ss_dssp             CHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEE
T ss_pred             CHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence            9999999999999999999963211                1468999999998 45544

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.39  E-value=9.4e-05  Score=57.14  Aligned_cols=90  Identities=9%  Similarity=-0.020  Sum_probs=65.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|+-                ++.+|++..    .++.+..|+.........+++++++|+.|+++  +.+.++
T Consensus         5 VtGatG~iG~~----------------l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~   62 (221)
T 3ew7_A            5 IIGATGRAGSR----------------ILEEAKNRG----HEVTAIVRNAGKITQTHKDINILQKDIFDLTL--SDLSDQ   62 (221)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--HHHTTC
T ss_pred             EEcCCchhHHH----------------HHHHHHhCC----CEEEEEEcCchhhhhccCCCeEEeccccChhh--hhhcCC
Confidence            45667777777                777888664    56667777654332122678999999999888  788999


Q ss_pred             cEEEecccccccc-------chHHHHHHHHcCC-CEeeCC
Q psy1304         127 RVILNCVGPYTWY-------GEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       127 dVVIN~aGPf~~~-------g~~VaeACieAGt-hYVDlt  158 (184)
                      |+||||+|+....       ...++++|.++|+ ++|-++
T Consensus        63 d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~S  102 (221)
T 3ew7_A           63 NVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVG  102 (221)
T ss_dssp             SEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred             CEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence            9999999985322       1689999999964 466554

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=97.36  E-value=0.00033  Score=58.42  Aligned_cols=80  Identities=10%  Similarity=0.099  Sum_probs=56.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC---CCCCCEEEEeCCCHHHHHHHhhc--CcEEEecccccccc---------
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN---LIDIPIIIADLKNESSILIMAKK--CRVILNCVGPYTWY---------  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~---~~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~---------  139 (184)
                      ++.+|++..    -+|.+..|+.....+.   ..++.++.+|+.|++++.+++++  +|+||||+|+....         
T Consensus        37 l~~~L~~~g----~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~  112 (333)
T 2q1w_A           37 IAELLLERG----DKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLT  112 (333)
T ss_dssp             HHHHHHHTT----CEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHH
T ss_pred             HHHHHHHCC----CEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECceecCCCccCChHHHH
Confidence            556666543    4565666653221111   14678899999999999999998  99999999976430         


Q ss_pred             ----chHHHHHHHHcCC-CEeeC
Q psy1304         140 ----GEAVVKACIEAKT-HHVDI  157 (184)
Q Consensus       140 ----g~~VaeACieAGt-hYVDl  157 (184)
                          -..++++|.+.|+ ++|-+
T Consensus       113 N~~~~~~l~~a~~~~~~~~iV~~  135 (333)
T 2q1w_A          113 NCVGGSNVVQAAKKNNVGRFVYF  135 (333)
T ss_dssp             HTHHHHHHHHHHHHTTCSEEEEE
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEE
Confidence                1578999999997 45543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=97.34  E-value=0.00041  Score=56.99  Aligned_cols=89  Identities=11%  Similarity=0.081  Sum_probs=65.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|+-                ++.+|.+..    -+|....|+... .. ..+++++.+|+. ++++.++++++
T Consensus         7 VtGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~-~~-~~~~~~~~~Dl~-~~~~~~~~~~~   63 (311)
T 3m2p_A            7 VTGGTGFLGQY----------------VVESIKNDG----NTPIILTRSIGN-KA-INDYEYRVSDYT-LEDLINQLNDV   63 (311)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEESCCC-------CCEEEECCCC-HHHHHHHTTTC
T ss_pred             EECCCcHHHHH----------------HHHHHHhCC----CEEEEEeCCCCc-cc-CCceEEEEcccc-HHHHHHhhcCC
Confidence            46778888887                778888664    355556565222 11 347899999999 99999999999


Q ss_pred             cEEEecccccccc------------chHHHHHHHHcCCC-EeeCC
Q psy1304         127 RVILNCVGPYTWY------------GEAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       127 dVVIN~aGPf~~~------------g~~VaeACieAGth-YVDlt  158 (184)
                      |+||||+|+....            ...++++|.++|+. +|-++
T Consensus        64 d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~S  108 (311)
T 3m2p_A           64 DAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAS  108 (311)
T ss_dssp             SEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence            9999999976421            16899999999987 55443

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=97.29  E-value=0.00038  Score=57.35  Aligned_cols=93  Identities=6%  Similarity=0.016  Sum_probs=66.0

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc---c-ccC---CCCCCEEEEeCCCHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL---Y-REN---LIDIPIIIADLKNESSI  119 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l---g-~~~---~~~v~~v~vDv~D~~sL  119 (184)
                      |.+.++|=|+-                ++.+|++..++  .++....|+...   . ...   ..++.++.+|+.|++++
T Consensus         8 VTGatG~iG~~----------------l~~~L~~~g~~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   69 (336)
T 2hun_A            8 VTGGMGFIGSN----------------FIRYILEKHPD--WEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELV   69 (336)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHHCTT--CEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHH
T ss_pred             EECCCchHHHH----------------HHHHHHHhCCC--CEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHH
Confidence            46677888877                77888877655  566666554210   0 001   24577899999999999


Q ss_pred             HHHhhcCcEEEecccccccc----------------chHHHHHHHHcCC--CEeeC
Q psy1304         120 LIMAKKCRVILNCVGPYTWY----------------GEAVVKACIEAKT--HHVDI  157 (184)
Q Consensus       120 ~a~l~~~dVVIN~aGPf~~~----------------g~~VaeACieAGt--hYVDl  157 (184)
                      .+++.++|+||||+|+....                -..++++|.+.+.  ++|-+
T Consensus        70 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~  125 (336)
T 2hun_A           70 KELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHV  125 (336)
T ss_dssp             HHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence            99999999999999976311                1578899999875  55543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=97.26  E-value=0.00051  Score=55.36  Aligned_cols=88  Identities=14%  Similarity=0.043  Sum_probs=63.1

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|+.                ++.+|++.  +  .++.+..|+....  ...++.++.+|+.|++++.++++++
T Consensus         7 VtGatG~iG~~----------------l~~~L~~~--g--~~V~~~~r~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~   64 (267)
T 3ay3_A            7 VTGAAGGVGSA----------------IRPHLGTL--A--HEVRLSDIVDLGA--AEAHEEIVACDLADAQAVHDLVKDC   64 (267)
T ss_dssp             EESTTSHHHHH----------------HGGGGGGT--E--EEEEECCSSCCCC--CCTTEEECCCCTTCHHHHHHHHTTC
T ss_pred             EECCCCHHHHH----------------HHHHHHhC--C--CEEEEEeCCCccc--cCCCccEEEccCCCHHHHHHHHcCC
Confidence            45666777766                66666654  3  5666666665421  1245678889999999999999999


Q ss_pred             cEEEecccccccc------------chHHHHHHHHcCC-CEee
Q psy1304         127 RVILNCVGPYTWY------------GEAVVKACIEAKT-HHVD  156 (184)
Q Consensus       127 dVVIN~aGPf~~~------------g~~VaeACieAGt-hYVD  156 (184)
                      |+||||+|+....            -..++++|.+.|+ ++|-
T Consensus        65 d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~  107 (267)
T 3ay3_A           65 DGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVF  107 (267)
T ss_dssp             SEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence            9999999975211            1578999999987 4553

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=97.25  E-value=0.00059  Score=56.08  Aligned_cols=92  Identities=8%  Similarity=0.025  Sum_probs=64.2

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC-CCCCEEEEeCCCHHHHHHHhh-
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL-IDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~-~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      |.+.++|=|+.                ++.+|++..    -++.+..|+.....+.. .+++++.+|+.|++++.++++ 
T Consensus         6 VtGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   65 (330)
T 2c20_A            6 ICGGAGYIGSH----------------AVKKLVDEG----LSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQ   65 (330)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHH
T ss_pred             EECCCcHHHHH----------------HHHHHHhCC----CEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhh
Confidence            45667788877                777787654    34545555432211111 368899999999999999999 


Q ss_pred             -cCcEEEecccccccc----------------chHHHHHHHHcCC-CEeeCC
Q psy1304         125 -KCRVILNCVGPYTWY----------------GEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       125 -~~dVVIN~aGPf~~~----------------g~~VaeACieAGt-hYVDlt  158 (184)
                       ++|+||||+|+....                -..++++|.+.|+ ++|-++
T Consensus        66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~S  117 (330)
T 2c20_A           66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSS  117 (330)
T ss_dssp             SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeC
Confidence             899999999976321                1578899999987 455443

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.25  E-value=0.00028  Score=60.41  Aligned_cols=93  Identities=9%  Similarity=-0.001  Sum_probs=66.0

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc----ccCCCCCCEEEEe-CCCHHHHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY----RENLIDIPIIIAD-LKNESSIL  120 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg----~~~~~~v~~v~vD-v~D~~sL~  120 (184)
                      .|.+.++|-|+.                ++.+|++..    -+|.+..|+....    .....+++++.+| +.|++++.
T Consensus         9 lVtGatG~iG~~----------------l~~~L~~~g----~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~   68 (352)
T 1xgk_A            9 AVVGATGRQGAS----------------LIRVAAAVG----HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMD   68 (352)
T ss_dssp             EEESTTSHHHHH----------------HHHHHHHTT----CCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHH
T ss_pred             EEECCCCHHHHH----------------HHHHHHhCC----CEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHH
Confidence            346677788877                677777643    3444555654321    0012467889999 99999999


Q ss_pred             HHhhcCcEEEeccccc----cccchHHHHHHHHcC-C-CEeeCC
Q psy1304         121 IMAKKCRVILNCVGPY----TWYGEAVVKACIEAK-T-HHVDIT  158 (184)
Q Consensus       121 a~l~~~dVVIN~aGPf----~~~g~~VaeACieAG-t-hYVDlt  158 (184)
                      ++++++|+||++++++    ...+.+++++|.++| + ++|-++
T Consensus        69 ~~~~~~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~S  112 (352)
T 1xgk_A           69 TLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS  112 (352)
T ss_dssp             HHHTTCSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred             HHHhcCCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeC
Confidence            9999999999988876    233588999999999 6 555544

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=97.13  E-value=0.00092  Score=54.97  Aligned_cols=93  Identities=16%  Similarity=0.117  Sum_probs=64.7

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--CCCCCCEEEEeCCC-HHHHHHHh
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--NLIDIPIIIADLKN-ESSILIMA  123 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--~~~~v~~v~vDv~D-~~sL~a~l  123 (184)
                      |.+.++|-|+.                ++.+|++. ++  -+|.+..|+......  ...+++++++|+.| .+.+.+++
T Consensus         5 VtGatG~iG~~----------------l~~~L~~~-~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   65 (345)
T 2bll_A            5 ILGVNGFIGNH----------------LTERLLRE-DH--YEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV   65 (345)
T ss_dssp             EETCSSHHHHH----------------HHHHHHHS-TT--CEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH
T ss_pred             EECCCcHHHHH----------------HHHHHHHh-CC--CEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhc
Confidence            45677787877                67777765 24  456666665433211  12467899999998 46789999


Q ss_pred             hcCcEEEecccccccc----------------chHHHHHHHHcCCCEeeCC
Q psy1304         124 KKCRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDlt  158 (184)
                      +++|+||||+|.....                ...++++|.+.|.++|-++
T Consensus        66 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~S  116 (345)
T 2bll_A           66 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS  116 (345)
T ss_dssp             HHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEEC
T ss_pred             cCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence            9999999999864310                1478899999886666544

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=97.10  E-value=0.0013  Score=54.53  Aligned_cols=91  Identities=11%  Similarity=-0.039  Sum_probs=62.0

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCC-CCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPT-SNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~-~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+.++|-|+.                ++.+|.+..+ ...-+|....|+.........+++++.+|+.|++++.+++++
T Consensus         6 VtGatG~iG~~----------------l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   69 (364)
T 2v6g_A            6 IVGVTGIIGNS----------------LAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSP   69 (364)
T ss_dssp             EETTTSHHHHH----------------HHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTT
T ss_pred             EECCCcHHHHH----------------HHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhc
Confidence            45667777776                6666665442 001355555565433211225688999999999999999999


Q ss_pred             ---CcEEEecccccccc-----------chHHHHHHHHc--CCC
Q psy1304         126 ---CRVILNCVGPYTWY-----------GEAVVKACIEA--KTH  153 (184)
Q Consensus       126 ---~dVVIN~aGPf~~~-----------g~~VaeACieA--Gth  153 (184)
                         +|+||||+|+....           -..++++|.+.  |+.
T Consensus        70 ~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~  113 (364)
T 2v6g_A           70 LTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLK  113 (364)
T ss_dssp             CTTCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCC
T ss_pred             CCCCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccc
Confidence               99999999965311           16889999987  554

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=97.05  E-value=0.00077  Score=56.30  Aligned_cols=53  Identities=13%  Similarity=0.019  Sum_probs=43.5

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccc------c----------chHHHHHHHHcCCC-Eee
Q psy1304         104 IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTW------Y----------GEAVVKACIEAKTH-HVD  156 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~------~----------g~~VaeACieAGth-YVD  156 (184)
                      .++.++++|+.|++++.++++++|+||||+|+...      .          ...++++|.+.|+. +|-
T Consensus        81 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~  150 (352)
T 1sb8_A           81 SNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTY  150 (352)
T ss_dssp             TTEEEEECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEE
T ss_pred             CceEEEECCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            46789999999999999999999999999997531      0          15789999999874 543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=97.03  E-value=0.0011  Score=54.77  Aligned_cols=94  Identities=9%  Similarity=0.082  Sum_probs=63.5

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhC-CCC-CceeEEeeeeccc------ccc-cCCCCCCEEEEeCCCHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADA-PTS-NLTRLGLLGARDC------LYR-ENLIDIPIIIADLKNES  117 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~-~~~-~~~~iaLAGrr~~------lg~-~~~~~v~~v~vDv~D~~  117 (184)
                      |.+.++|=|+-                ++.+|++. .++ ...++.+..|+..      +.. ....+++++.+|+.|++
T Consensus         5 VTGatG~iG~~----------------l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   68 (337)
T 1r6d_A            5 VTGGAGFIGSH----------------FVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAG   68 (337)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHH
T ss_pred             EECCccHHHHH----------------HHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHH
Confidence            45667788877                77778764 332 0024444445321      100 01246788999999999


Q ss_pred             HHHHHhhcCcEEEecccccccc----------------chHHHHHHHHcCC-CEee
Q psy1304         118 SILIMAKKCRVILNCVGPYTWY----------------GEAVVKACIEAKT-HHVD  156 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~~~----------------g~~VaeACieAGt-hYVD  156 (184)
                      ++.+++.++|+||||+|+....                -..++++|.+.|+ ++|-
T Consensus        69 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~  124 (337)
T 1r6d_A           69 LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVH  124 (337)
T ss_dssp             HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEE
T ss_pred             HHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            9999999999999999976310                1578999999998 5553

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.99  E-value=0.00076  Score=57.33  Aligned_cols=83  Identities=10%  Similarity=0.143  Sum_probs=59.0

Q ss_pred             hhhhhhhCCCCCce-eEEeeeeccccccc-----CCCCCCEEEEeCCCHHHHHHHhhcCcEEEecccccccc--------
Q psy1304          74 PSAYKADAPTSNLT-RLGLLGARDCLYRE-----NLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWY--------  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~-~iaLAGrr~~lg~~-----~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~--------  139 (184)
                      ++.+|++.+ +  . +|.+.+|+......     ...++.++.+|+.|++++.++++++|+|||+||.....        
T Consensus        37 l~~~L~~~~-g--~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~  113 (344)
T 2gn4_A           37 FVRKVLDTT-N--AKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLE  113 (344)
T ss_dssp             HHHHHHHHC-C--CSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHH
T ss_pred             HHHHHHhhC-C--CCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECCCCCCCCchhcCHHH
Confidence            666777652 2  3 56666665432110     12468899999999999999999999999999865311        


Q ss_pred             --------chHHHHHHHHcCCC-EeeCCC
Q psy1304         140 --------GEAVVKACIEAKTH-HVDITG  159 (184)
Q Consensus       140 --------g~~VaeACieAGth-YVDltG  159 (184)
                              ...++++|.+.|+. +|-++-
T Consensus       114 ~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS  142 (344)
T 2gn4_A          114 CIKTNIMGASNVINACLKNAISQVIALST  142 (344)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence                    15799999999984 666654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=96.96  E-value=0.0012  Score=52.67  Aligned_cols=84  Identities=15%  Similarity=0.005  Sum_probs=60.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc-
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK-  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~-  125 (184)
                      |.+.++|-|+-                ++.+|++   +  -++.+..|+....    .+   +.+|+.|++++.+++++ 
T Consensus         5 VtGatG~iG~~----------------l~~~L~~---g--~~V~~~~r~~~~~----~~---~~~Dl~~~~~~~~~~~~~   56 (273)
T 2ggs_A            5 ITGASGQLGIE----------------LSRLLSE---R--HEVIKVYNSSEIQ----GG---YKLDLTDFPRLEDFIIKK   56 (273)
T ss_dssp             EETTTSHHHHH----------------HHHHHTT---T--SCEEEEESSSCCT----TC---EECCTTSHHHHHHHHHHH
T ss_pred             EECCCChhHHH----------------HHHHHhc---C--CeEEEecCCCcCC----CC---ceeccCCHHHHHHHHHhc
Confidence            34556676766                6666663   3  4566666665431    22   88999999999999997 


Q ss_pred             -CcEEEecccccccc----------------chHHHHHHHHcCCCEeeCC
Q psy1304         126 -CRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       126 -~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDlt  158 (184)
                       +|+||||+|+....                ...++++|.+.|+++|-++
T Consensus        57 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~S  106 (273)
T 2ggs_A           57 RPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHIS  106 (273)
T ss_dssp             CCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEe
Confidence             99999999976421                2588999999988876554

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=96.86  E-value=0.00067  Score=55.53  Aligned_cols=85  Identities=11%  Similarity=0.065  Sum_probs=45.7

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc-
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK-  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~-  125 (184)
                      |.+.++|-|+-                ++.+|++..    -+|.+..|++..     ++  ++.+|+.|++++.+++++ 
T Consensus         7 VtGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~-----~~--~~~~Dl~d~~~~~~~~~~~   59 (315)
T 2ydy_A            7 VTGATGLLGRA----------------VHKEFQQNN----WHAVGCGFRRAR-----PK--FEQVNLLDSNAVHHIIHDF   59 (315)
T ss_dssp             EETTTSHHHHH----------------HHHHHHTTT----CEEEEEC-------------------------CHHHHHHH
T ss_pred             EECCCcHHHHH----------------HHHHHHhCC----CeEEEEccCCCC-----CC--eEEecCCCHHHHHHHHHhh
Confidence            45667777776                667777653    455555555432     12  788999999999999986 


Q ss_pred             -CcEEEecccccccc----------------chHHHHHHHHcCCCEeeCC
Q psy1304         126 -CRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       126 -~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDlt  158 (184)
                       +|+||||+|+....                -..++++|.+.|+++|-++
T Consensus        60 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  109 (315)
T 2ydy_A           60 QPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYIS  109 (315)
T ss_dssp             CCSEEEECC-------------------CHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence             89999999975321                1578999999998876543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=96.85  E-value=0.0016  Score=53.62  Aligned_cols=87  Identities=11%  Similarity=0.127  Sum_probs=61.6

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-------ccCCCCCCEEEEeCCCHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-------RENLIDIPIIIADLKNESSI  119 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-------~~~~~~v~~v~vDv~D~~sL  119 (184)
                      |.+.++|=|+-                ++.+|++..    -+|.+..|+....       ....++++++.+|+.|++++
T Consensus         6 VTGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~   65 (347)
T 1orr_A            6 ITGGCGFLGSN----------------LASFALSQG----IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDV   65 (347)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHH
T ss_pred             EeCCCchhHHH----------------HHHHHHhCC----CEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHH
Confidence            45677788877                777787653    4555555521100       00124588999999999999


Q ss_pred             HHHhhc--CcEEEecccccccc----------------chHHHHHHHHcCCC
Q psy1304         120 LIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEAKTH  153 (184)
Q Consensus       120 ~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieAGth  153 (184)
                      .+++++  +|+||||+|+....                -..++++|.+.++.
T Consensus        66 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~  117 (347)
T 1orr_A           66 TRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN  117 (347)
T ss_dssp             HHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999999  99999999975320                14789999999874

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=96.84  E-value=0.00043  Score=56.18  Aligned_cols=77  Identities=10%  Similarity=0.067  Sum_probs=57.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc-CcEEEecccccccc-----------ch
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK-CRVILNCVGPYTWY-----------GE  141 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~-~dVVIN~aGPf~~~-----------g~  141 (184)
                      ++.+|.+..    -+|....|+...   ...+++++.+|+.|++++.+++++ +|+||||+|+....           ..
T Consensus        18 l~~~L~~~g----~~V~~~~r~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~   90 (286)
T 3gpi_A           18 LARRLTAQG----HEVTGLRRSAQP---MPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLR   90 (286)
T ss_dssp             HHHHHHHTT----CCEEEEECTTSC---CCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHH
T ss_pred             HHHHHHHCC----CEEEEEeCCccc---cccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Confidence            778888764    345555565443   236799999999999999999998 99999999874211           26


Q ss_pred             HHHHHHHHcCCC-EeeC
Q psy1304         142 AVVKACIEAKTH-HVDI  157 (184)
Q Consensus       142 ~VaeACieAGth-YVDl  157 (184)
                      .++++|.+.|+. +|-+
T Consensus        91 ~ll~a~~~~~~~~~v~~  107 (286)
T 3gpi_A           91 NTLSALEGAPLQHVFFV  107 (286)
T ss_dssp             HHHHHTTTSCCCEEEEE
T ss_pred             HHHHHHhhCCCCEEEEE
Confidence            899999998864 5543

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=96.84  E-value=0.00084  Score=56.99  Aligned_cols=79  Identities=3%  Similarity=-0.074  Sum_probs=54.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC---CCCCCEEEEeCCCHHHHHHHhhcCcEEEecccccccc-----------
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN---LIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWY-----------  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~---~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~-----------  139 (184)
                      ++.+|++..+   -+|.+..|+.....+.   ..+++++.+|+.|++++.++++++|+||||+|+....           
T Consensus        48 l~~~L~~~g~---~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~  124 (377)
T 2q1s_A           48 LVKRLLELGV---NQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHE  124 (377)
T ss_dssp             HHHHHHHTTC---SEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHH
T ss_pred             HHHHHHHcCC---ceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHH
Confidence            6666766541   2444455543321111   2467889999999999999999999999999976321           


Q ss_pred             -----chHHHHHHHHc-CC-CEe
Q psy1304         140 -----GEAVVKACIEA-KT-HHV  155 (184)
Q Consensus       140 -----g~~VaeACieA-Gt-hYV  155 (184)
                           -..++++|.+. |+ ++|
T Consensus       125 ~nv~~~~~ll~a~~~~~~~~~~V  147 (377)
T 2q1s_A          125 NNTLTTLKLYERLKHFKRLKKVV  147 (377)
T ss_dssp             HHTHHHHHHHHHHTTCSSCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEE
Confidence                 25788999998 77 444

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=96.79  E-value=0.0012  Score=54.11  Aligned_cols=92  Identities=11%  Similarity=-0.041  Sum_probs=62.9

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|=|+-                ++.+|++.. .   .+++..++..........+.++.+|+.| +++.++++++
T Consensus         6 VTGatG~iG~~----------------l~~~L~~~g-~---~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~   64 (313)
T 3ehe_A            6 VTGGAGFIGSH----------------VVDKLSESN-E---IVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGA   64 (313)
T ss_dssp             EETTTSHHHHH----------------HHHHHTTTS-C---EEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTC
T ss_pred             EECCCchHHHH----------------HHHHHHhCC-C---EEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCC
Confidence            45667777776                667777654 2   3444433332222223568899999999 9999999999


Q ss_pred             cEEEecccccccc----------------chHHHHHHHHcCC-CEeeCCC
Q psy1304         127 RVILNCVGPYTWY----------------GEAVVKACIEAKT-HHVDITG  159 (184)
Q Consensus       127 dVVIN~aGPf~~~----------------g~~VaeACieAGt-hYVDltG  159 (184)
                      |+|||++|+....                -..++++|.+.|+ ++|-++.
T Consensus        65 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS  114 (313)
T 3ehe_A           65 EEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST  114 (313)
T ss_dssp             SEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             CEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence            9999999953211                1468899999997 4666553

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.79  E-value=0.0022  Score=52.84  Aligned_cols=93  Identities=8%  Similarity=-0.057  Sum_probs=65.6

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNES  117 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~  117 (184)
                      .|-+.++|=|+-                ++.+|++..    -++.+..|+......        ...++.++++|+.|++
T Consensus         9 lVTGatG~iG~~----------------l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   68 (341)
T 3enk_A            9 LVTGGAGYIGSH----------------TAVELLAHG----YDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDER   68 (341)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHTT----CEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHH
T ss_pred             EEecCCcHHHHH----------------HHHHHHHCC----CcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHH
Confidence            346667777776                777888764    456666665432211        0246889999999999


Q ss_pred             HHHHHhh--cCcEEEecccccccc----------------chHHHHHHHHcCC-CEeeCC
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWY----------------GEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~----------------g~~VaeACieAGt-hYVDlt  158 (184)
                      ++.++++  ++|+||||+|.....                ...++++|.+.|+ +.|-++
T Consensus        69 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~S  128 (341)
T 3enk_A           69 ALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSS  128 (341)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             HHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence            9999999  899999999975311                1478899999987 455543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.77  E-value=0.00069  Score=53.58  Aligned_cols=79  Identities=6%  Similarity=-0.027  Sum_probs=56.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC-CCCC-CEEEEeCCCHHHHHHHhhcCcEEEecccccccc------------
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN-LIDI-PIIIADLKNESSILIMAKKCRVILNCVGPYTWY------------  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~-~~~v-~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~------------  139 (184)
                      ++.+|++.  +  .++.+..|+....... ..++ +++++|+.  +++.+.++++|+|||++|+....            
T Consensus        37 l~~~L~~~--G--~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~  110 (236)
T 3e8x_A           37 LLSELKNK--G--HEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWG  110 (236)
T ss_dssp             HHHHHHHT--T--CEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHH
T ss_pred             HHHHHHhC--C--CeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCCCCCCCCccccchhhHHH
Confidence            56666654  3  5677777765432211 1467 89999998  78889999999999999986421            


Q ss_pred             chHHHHHHHHcCCC-EeeCC
Q psy1304         140 GEAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       140 g~~VaeACieAGth-YVDlt  158 (184)
                      ...++++|.+.|+. +|-++
T Consensus       111 ~~~l~~a~~~~~~~~iv~~S  130 (236)
T 3e8x_A          111 AIKTIQEAEKRGIKRFIMVS  130 (236)
T ss_dssp             HHHHHHHHHHHTCCEEEEEC
T ss_pred             HHHHHHHHHHcCCCEEEEEe
Confidence            25799999999864 65544

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.76  E-value=0.0011  Score=54.37  Aligned_cols=91  Identities=15%  Similarity=0.008  Sum_probs=62.1

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSI  119 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL  119 (184)
                      |.+.++|=|+-                ++.+|++..    -++.+..|+......       ...+++++.+|+.|++++
T Consensus         8 VtGatG~iG~~----------------l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   67 (345)
T 2z1m_A            8 ITGIRGQDGAY----------------LAKLLLEKG----YEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNI   67 (345)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHH
T ss_pred             EECCCChHHHH----------------HHHHHHHCC----CEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHH
Confidence            45566777766                667777653    456666665432110       113577889999999999


Q ss_pred             HHHhhc--CcEEEecccccccc----------------chHHHHHHHHcCC--CEeeC
Q psy1304         120 LIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEAKT--HHVDI  157 (184)
Q Consensus       120 ~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieAGt--hYVDl  157 (184)
                      .+++++  .|+||||||+....                -..++++|.+.|+  ++|-+
T Consensus        68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~  125 (345)
T 2z1m_A           68 IRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQA  125 (345)
T ss_dssp             HHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEE
Confidence            999987  59999999975311                1578899999885  55543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=96.75  E-value=0.002  Score=53.52  Aligned_cols=87  Identities=10%  Similarity=0.005  Sum_probs=60.5

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc---cc-ccC---CCCCCEEEEeCCCHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC---LY-REN---LIDIPIIIADLKNESSI  119 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~---lg-~~~---~~~v~~v~vDv~D~~sL  119 (184)
                      |-+.++|=|.-                ++.+|++. ++  .++.+..|+..   .. ...   ..++.++.+|+.|++++
T Consensus         5 VTGasG~iG~~----------------l~~~L~~~-~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   65 (361)
T 1kew_A            5 ITGGAGFIGSA----------------VVRHIIKN-TQ--DTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEI   65 (361)
T ss_dssp             EESTTSHHHHH----------------HHHHHHHH-CS--CEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHH
T ss_pred             EECCCchHhHH----------------HHHHHHhc-CC--CeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHH
Confidence            45667777776                67777763 24  45666555431   00 001   13577899999999999


Q ss_pred             HHHhh--cCcEEEecccccccc----------------chHHHHHHHHc--CC
Q psy1304         120 LIMAK--KCRVILNCVGPYTWY----------------GEAVVKACIEA--KT  152 (184)
Q Consensus       120 ~a~l~--~~dVVIN~aGPf~~~----------------g~~VaeACieA--Gt  152 (184)
                      .++++  ++|+||||+|+....                -..++++|.+.  |+
T Consensus        66 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v  118 (361)
T 1kew_A           66 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSAL  118 (361)
T ss_dssp             HHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence            99998  899999999976410                15788999988  74

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=96.75  E-value=0.00081  Score=54.47  Aligned_cols=81  Identities=20%  Similarity=0.094  Sum_probs=57.8

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc-
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK-  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~-  125 (184)
                      |.+.++|-|+.                ++.+|. .  +  -++....|+.          .++.+|+.|++++.+++++ 
T Consensus         5 VtGatG~iG~~----------------l~~~L~-~--g--~~V~~~~r~~----------~~~~~D~~d~~~~~~~~~~~   53 (299)
T 1n2s_A            5 LFGKTGQVGWE----------------LQRSLA-P--V--GNLIALDVHS----------KEFCGDFSNPKGVAETVRKL   53 (299)
T ss_dssp             EECTTSHHHHH----------------HHHHTT-T--T--SEEEEECTTC----------SSSCCCTTCHHHHHHHHHHH
T ss_pred             EECCCCHHHHH----------------HHHHhh-c--C--CeEEEecccc----------ccccccCCCHHHHHHHHHhc
Confidence            45566777766                556665 3  4  4555555543          2456899999999999997 


Q ss_pred             -CcEEEecccccccc----------------chHHHHHHHHcCCCEeeCC
Q psy1304         126 -CRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       126 -~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDlt  158 (184)
                       +|+||||+|+....                ...++++|.+.|+++|-++
T Consensus        54 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  103 (299)
T 1n2s_A           54 RPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYS  103 (299)
T ss_dssp             CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEE
T ss_pred             CCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEe
Confidence             99999999975411                2688999999998866544

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.71  E-value=0.00023  Score=54.83  Aligned_cols=89  Identities=12%  Similarity=0.074  Sum_probs=64.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|+.                ++.+|++....  .++.+..|+...   ...+++++.+|+.|++++.+++  +
T Consensus        10 VtGatG~iG~~----------------l~~~l~~~g~~--~~V~~~~r~~~~---~~~~~~~~~~D~~~~~~~~~~~--~   66 (215)
T 2a35_A           10 LAGATGLTGEH----------------LLDRILSEPTL--AKVIAPARKALA---EHPRLDNPVGPLAELLPQLDGS--I   66 (215)
T ss_dssp             EECTTSHHHHH----------------HHHHHHHCTTC--CEEECCBSSCCC---CCTTEECCBSCHHHHGGGCCSC--C
T ss_pred             EECCCcHHHHH----------------HHHHHHhCCCC--CeEEEEeCCCcc---cCCCceEEeccccCHHHHHHhh--h
Confidence            45667777776                77788876542  256666666543   2356778889999999988888  9


Q ss_pred             cEEEeccccccc--------------cchHHHHHHHHcCCC-EeeCC
Q psy1304         127 RVILNCVGPYTW--------------YGEAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       127 dVVIN~aGPf~~--------------~g~~VaeACieAGth-YVDlt  158 (184)
                      |+||||+|+...              ....++++|.+.|+. +|-++
T Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  113 (215)
T 2a35_A           67 DTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVS  113 (215)
T ss_dssp             SEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             cEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEEC
Confidence            999999997642              126788999999985 66554

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.70  E-value=0.0012  Score=55.42  Aligned_cols=79  Identities=15%  Similarity=0.096  Sum_probs=56.3

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHHHHHHhhc---C
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESSILIMAKK---C  126 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~sL~a~l~~---~  126 (184)
                      ..|+||+.-|.|-   ++|----++..|++..    .++.+.+|+.+...+. ..++..+++|+.|+++++++++.   .
T Consensus         7 dlf~GK~alVTGa---s~GIG~aia~~la~~G----a~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~i   79 (242)
T 4b79_A            7 DIYAGQQVLVTGG---SSGIGAAIAMQFAELG----AEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRL   79 (242)
T ss_dssp             TTTTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred             CCCCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCC
Confidence            4599999999872   3331111444455443    7899999877543322 25678999999999999998874   7


Q ss_pred             cEEEeccccc
Q psy1304         127 RVILNCVGPY  136 (184)
Q Consensus       127 dVVIN~aGPf  136 (184)
                      |++||+||-.
T Consensus        80 DiLVNNAGi~   89 (242)
T 4b79_A           80 DVLVNNAGIS   89 (242)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999944

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=96.69  E-value=0.001  Score=53.72  Aligned_cols=78  Identities=14%  Similarity=0.109  Sum_probs=56.7

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      |.+.++|-|+-                ++.+|.+.  +  .+|....|              ..+|+.|++++.++++  
T Consensus        10 VtGatG~iG~~----------------l~~~L~~~--g--~~V~~~~r--------------~~~D~~d~~~~~~~~~~~   55 (287)
T 3sc6_A           10 ITGANGQLGKQ----------------LQEELNPE--E--YDIYPFDK--------------KLLDITNISQVQQVVQEI   55 (287)
T ss_dssp             EESTTSHHHHH----------------HHHHSCTT--T--EEEEEECT--------------TTSCTTCHHHHHHHHHHH
T ss_pred             EECCCCHHHHH----------------HHHHHHhC--C--CEEEEecc--------------cccCCCCHHHHHHHHHhc
Confidence            45667777766                56666654  3  45555544              1268999999999999  


Q ss_pred             cCcEEEecccccccc----------------chHHHHHHHHcCCCEeeCC
Q psy1304         125 KCRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       125 ~~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDlt  158 (184)
                      ++|+||||+|+....                ...++++|.+.|+++|-++
T Consensus        56 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~S  105 (287)
T 3sc6_A           56 RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYIS  105 (287)
T ss_dssp             CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence            699999999976421                1479999999999877554

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=96.65  E-value=0.0052  Score=50.18  Aligned_cols=89  Identities=11%  Similarity=0.103  Sum_probs=60.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-ccCCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-RENLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-~~~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      |-+.++|-|+-                ++.+|++..    -++.+..|..... .....+++++++|+.|++++.++++ 
T Consensus         5 VTGatG~iG~~----------------l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   64 (311)
T 2p5y_A            5 VTGGAGFIGSH----------------IVEDLLARG----LEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFRE   64 (311)
T ss_dssp             EETTTSHHHHH----------------HHHHHHTTT----CEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHH
T ss_pred             EEeCCcHHHHH----------------HHHHHHHCC----CEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHh
Confidence            35566777766                667777653    3454444532211 1111467889999999999999998 


Q ss_pred             -cCcEEEecccccccc----------------chHHHHHHHHcCC-CEe
Q psy1304         125 -KCRVILNCVGPYTWY----------------GEAVVKACIEAKT-HHV  155 (184)
Q Consensus       125 -~~dVVIN~aGPf~~~----------------g~~VaeACieAGt-hYV  155 (184)
                       ++|+|||++|+....                -..++++|.+.|+ ++|
T Consensus        65 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv  113 (311)
T 2p5y_A           65 FRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLV  113 (311)
T ss_dssp             HCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEE
T ss_pred             cCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence             899999999975310                1578899999987 344

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.61  E-value=0.0037  Score=51.63  Aligned_cols=53  Identities=8%  Similarity=0.014  Sum_probs=42.7

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh--cCcEEEecccccccc----------------chHHHHHHHHcCCC-Eee
Q psy1304         104 IDIPIIIADLKNESSILIMAK--KCRVILNCVGPYTWY----------------GEAVVKACIEAKTH-HVD  156 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~----------------g~~VaeACieAGth-YVD  156 (184)
                      .++.++.+|+.|++++.++++  ++|+||||+|+....                -..++++|.+.|+. +|-
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~  129 (348)
T 1ek6_A           58 RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVF  129 (348)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CceEEEECCCCCHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence            467899999999999999999  899999999975310                15788999998873 443

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=96.61  E-value=0.0015  Score=55.13  Aligned_cols=87  Identities=13%  Similarity=0.017  Sum_probs=61.0

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc----ccCC--------C-CCCEEEEe
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY----RENL--------I-DIPIIIAD  112 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg----~~~~--------~-~v~~v~vD  112 (184)
                      .|.+.++|=|+-                ++.+|++..    -+|.+..|+....    ....        . ++.++.+|
T Consensus        32 lVtGatG~IG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   91 (381)
T 1n7h_A           32 LITGITGQDGSY----------------LTEFLLGKG----YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYAD   91 (381)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHTT----CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECC
T ss_pred             EEEcCCchHHHH----------------HHHHHHHCC----CEEEEEecCCccccchhhhhhhhccccccccceEEEECC
Confidence            457778888887                777787653    4555555654321    0011        1 57789999


Q ss_pred             CCCHHHHHHHhhc--CcEEEecccccccc----------------chHHHHHHHHcCC
Q psy1304         113 LKNESSILIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEAKT  152 (184)
Q Consensus       113 v~D~~sL~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieAGt  152 (184)
                      +.|++++.+++++  .|+||||+|+....                -..++++|.+.++
T Consensus        92 l~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~  149 (381)
T 1n7h_A           92 LTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI  149 (381)
T ss_dssp             TTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999999997  59999999975421                1578899988764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.59  E-value=0.0033  Score=51.33  Aligned_cols=81  Identities=10%  Similarity=0.050  Sum_probs=59.2

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc-
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK-  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~-  125 (184)
                      |-+.++|=|+-                ++.+|++..    -+|.+..|+... . .. ++.++.+|+.|++++.+++++ 
T Consensus        17 VTGatG~iG~~----------------l~~~L~~~G----~~V~~~~r~~~~-~-~l-~~~~~~~Dl~d~~~~~~~~~~~   73 (321)
T 2pk3_A           17 ITGVAGFVGKY----------------LANHLTEQN----VEVFGTSRNNEA-K-LP-NVEMISLDIMDSQRVKKVISDI   73 (321)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEESCTTC-C-CT-TEEEEECCTTCHHHHHHHHHHH
T ss_pred             EECCCChHHHH----------------HHHHHHHCC----CEEEEEecCCcc-c-cc-eeeEEECCCCCHHHHHHHHHhc
Confidence            46677888877                777787653    455556565443 2 12 678899999999999999987 


Q ss_pred             -CcEEEecccccccc----------------chHHHHHHHHc
Q psy1304         126 -CRVILNCVGPYTWY----------------GEAVVKACIEA  150 (184)
Q Consensus       126 -~dVVIN~aGPf~~~----------------g~~VaeACieA  150 (184)
                       +|+||||+|+....                -..++++|.+.
T Consensus        74 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~  115 (321)
T 2pk3_A           74 KPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDS  115 (321)
T ss_dssp             CCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHh
Confidence             99999999975411                15788899775

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.59  E-value=0.0021  Score=52.02  Aligned_cols=78  Identities=14%  Similarity=0.109  Sum_probs=55.9

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      |.+.++|-|+-                ++.+|++.  +  -+|....|+              .+|+.|++++.++++  
T Consensus        17 VtGatG~iG~~----------------l~~~L~~~--g--~~V~~~~r~--------------~~Dl~d~~~~~~~~~~~   62 (292)
T 1vl0_A           17 ITGANGQLGRE----------------IQKQLKGK--N--VEVIPTDVQ--------------DLDITNVLAVNKFFNEK   62 (292)
T ss_dssp             EESTTSHHHHH----------------HHHHHTTS--S--EEEEEECTT--------------TCCTTCHHHHHHHHHHH
T ss_pred             EECCCChHHHH----------------HHHHHHhC--C--CeEEeccCc--------------cCCCCCHHHHHHHHHhc
Confidence            45666777766                56666654  3  455555443              268999999999999  


Q ss_pred             cCcEEEecccccccc----------------chHHHHHHHHcCCCEeeCC
Q psy1304         125 KCRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       125 ~~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDlt  158 (184)
                      ++|+||||+|+....                -..++++|.+.|+++|-++
T Consensus        63 ~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~S  112 (292)
T 1vl0_A           63 KPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQIS  112 (292)
T ss_dssp             CCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEec
Confidence            799999999975310                1578999999998766544

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=96.55  E-value=0.0023  Score=52.80  Aligned_cols=93  Identities=18%  Similarity=0.164  Sum_probs=61.7

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeCCCHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADLKNES  117 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv~D~~  117 (184)
                      .|-+.++|-|+-                ++.+|.+..    -++....|+.....        ....+++++++|+.|++
T Consensus        13 lVTGatGfIG~~----------------l~~~Ll~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   72 (338)
T 2rh8_A           13 CVVGGTGFVASL----------------LVKLLLQKG----YAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDEL   72 (338)
T ss_dssp             EEECTTSHHHHH----------------HHHHHHHTT----CEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSS
T ss_pred             EEECCchHHHHH----------------HHHHHHHCC----CEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChH
Confidence            346677888877                677777654    33433334332100        01135778999999999


Q ss_pred             HHHHHhhcCcEEEecccccccc---------------chHHHHHHHHcC-C-CEeeCC
Q psy1304         118 SILIMAKKCRVILNCVGPYTWY---------------GEAVVKACIEAK-T-HHVDIT  158 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~~~---------------g~~VaeACieAG-t-hYVDlt  158 (184)
                      ++.++++++|+|||+|||....               ...++++|.++| + +.|-++
T Consensus        73 ~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~S  130 (338)
T 2rh8_A           73 SFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTS  130 (338)
T ss_dssp             SSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred             HHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEe
Confidence            9999999999999999975211               146889999986 5 355443

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.54  E-value=0.0017  Score=52.71  Aligned_cols=78  Identities=14%  Similarity=0.185  Sum_probs=51.4

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      +.++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+       ...++.++++|+.|++++++++
T Consensus         2 ~~l~~k~vlVTGa---s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   74 (257)
T 3imf_A            2 NAMKEKVVIITGG---SSGMGKGMATRFAKE--G--ARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMI   74 (257)
T ss_dssp             CTTTTCEEEETTT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            4567777766662   122001144555544  3  678888886542211       1246788999999999999998


Q ss_pred             h-------cCcEEEecccc
Q psy1304         124 K-------KCRVILNCVGP  135 (184)
Q Consensus       124 ~-------~~dVVIN~aGP  135 (184)
                      +       +.|++||++|.
T Consensus        75 ~~~~~~~g~id~lv~nAg~   93 (257)
T 3imf_A           75 EQIDEKFGRIDILINNAAG   93 (257)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            7       67999999993

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.51  E-value=0.0038  Score=52.68  Aligned_cols=51  Identities=10%  Similarity=0.023  Sum_probs=41.7

Q ss_pred             CCEEEEeCCCHHHHHHHhh--c-CcEEEecccccccc----------------chHHHHHHHHcCCC-Eee
Q psy1304         106 IPIIIADLKNESSILIMAK--K-CRVILNCVGPYTWY----------------GEAVVKACIEAKTH-HVD  156 (184)
Q Consensus       106 v~~v~vDv~D~~sL~a~l~--~-~dVVIN~aGPf~~~----------------g~~VaeACieAGth-YVD  156 (184)
                      +.++.+|+.|++++.++++  + +|+||||||+....                -..++++|.+.|+. +|-
T Consensus        71 ~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~  141 (397)
T 1gy8_A           71 AALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIF  141 (397)
T ss_dssp             CEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             EEEEECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEE
Confidence            7899999999999999998  6 99999999976421                15688999999873 443

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=96.48  E-value=0.0025  Score=53.75  Aligned_cols=55  Identities=15%  Similarity=0.030  Sum_probs=43.5

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhc--CcEEEeccccccc---------------c----chHHHHHHHHcCC--CEeeCC
Q psy1304         104 IDIPIIIADLKNESSILIMAKK--CRVILNCVGPYTW---------------Y----GEAVVKACIEAKT--HHVDIT  158 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~---------------~----g~~VaeACieAGt--hYVDlt  158 (184)
                      .++.++.+|+.|++++.+++++  +|+||||||+...               .    -..++++|.+.|+  ++|-++
T Consensus        77 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~S  154 (404)
T 1i24_A           77 KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLG  154 (404)
T ss_dssp             CCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             CceEEEECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeC
Confidence            4688999999999999999998  9999999996421               0    1578899999885  555443

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.47  E-value=0.0058  Score=50.89  Aligned_cols=91  Identities=10%  Similarity=0.074  Sum_probs=61.7

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~  120 (184)
                      |.+.++|=|+-                ++.+|++..    -+|.+..|+......      ...++.++++|+.|++++.
T Consensus        14 VtGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   73 (357)
T 1rkx_A           14 VTGHTGFKGGW----------------LSLWLQTMG----ATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLL   73 (357)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHH
T ss_pred             EECCCchHHHH----------------HHHHHHhCC----CeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHH
Confidence            45666777766                667777653    456666665432110      1246889999999999999


Q ss_pred             HHhhc--CcEEEecccccc-cc---------------chHHHHHHHHcC-C-CEeeC
Q psy1304         121 IMAKK--CRVILNCVGPYT-WY---------------GEAVVKACIEAK-T-HHVDI  157 (184)
Q Consensus       121 a~l~~--~dVVIN~aGPf~-~~---------------g~~VaeACieAG-t-hYVDl  157 (184)
                      +++++  +|+||||+|... ..               -..++++|.+.| + ++|-+
T Consensus        74 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~  130 (357)
T 1rkx_A           74 ESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI  130 (357)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEE
T ss_pred             HHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence            99997  899999999421 10               146899999886 4 44443

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.44  E-value=0.0023  Score=51.71  Aligned_cols=77  Identities=16%  Similarity=0.163  Sum_probs=48.7

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC----CCCCEEEEeCCCHHHHHHHhh----
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL----IDIPIIIADLKNESSILIMAK----  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~----~~v~~v~vDv~D~~sL~a~l~----  124 (184)
                      ++||+.-|.|-   ++|----++.+|++..    .++.+.+|+.+...+..    .++.++++|+.|+++++++++    
T Consensus         5 l~~k~~lVTGa---s~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            5 LKSRVFIVTGA---SSGLGAAVTRMLAQEG----ATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             CTTCEEEEEST---TSHHHHHHHHHHHHTT----CEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            55666655551   1220011555555553    67888888765433221    467899999999999999988    


Q ss_pred             ---cCcEEEeccccc
Q psy1304         125 ---KCRVILNCVGPY  136 (184)
Q Consensus       125 ---~~dVVIN~aGPf  136 (184)
                         +.|++||+||.+
T Consensus        78 ~~g~id~lv~nAg~~   92 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTA   92 (257)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HcCCCCEEEECCCCC
Confidence               789999999965

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=96.43  E-value=0.0047  Score=50.46  Aligned_cols=48  Identities=4%  Similarity=0.018  Sum_probs=38.8

Q ss_pred             EeCCCHHHHHHHhh--cCcEEEeccccccc-----------------cchHHHHHHHHcCC-CEeeCC
Q psy1304         111 ADLKNESSILIMAK--KCRVILNCVGPYTW-----------------YGEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       111 vDv~D~~sL~a~l~--~~dVVIN~aGPf~~-----------------~g~~VaeACieAGt-hYVDlt  158 (184)
                      +|+.|++++.++++  ++|+||||+|+...                 .-..++++|.+.|+ ++|-++
T Consensus        39 ~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  106 (321)
T 1e6u_A           39 LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLG  106 (321)
T ss_dssp             CCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence            68999999999999  99999999997641                 01478999999998 566544

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=96.41  E-value=0.004  Score=52.03  Aligned_cols=81  Identities=12%  Similarity=0.096  Sum_probs=53.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc-ccCCCCCCEEEEeCCCHHHHHHHhh-----cCcEEEecccccccc--------
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY-RENLIDIPIIIADLKNESSILIMAK-----KCRVILNCVGPYTWY--------  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg-~~~~~~v~~v~vDv~D~~sL~a~l~-----~~dVVIN~aGPf~~~--------  139 (184)
                      ++.+|++...   -++.+..|+.... .....++. +.+|+.|+++++++++     ++|+||||+|+....        
T Consensus        62 l~~~L~~~g~---~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~  137 (357)
T 2x6t_A           62 IVKALNDKGI---TDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMM  137 (357)
T ss_dssp             HHHHHHHTTC---CCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHH
T ss_pred             HHHHHHHCCC---cEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHH
Confidence            6666766541   2344444543221 11223444 7789999999999998     599999999976421        


Q ss_pred             ------chHHHHHHHHcCCCEeeCC
Q psy1304         140 ------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       140 ------g~~VaeACieAGthYVDlt  158 (184)
                            -..++++|.+.|+++|-++
T Consensus       138 ~~n~~~~~~ll~a~~~~~~r~V~~S  162 (357)
T 2x6t_A          138 DNNYQYSKELLHYCLEREIPFLYAS  162 (357)
T ss_dssp             HHTHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEc
Confidence                  1578999999988766544

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.40  E-value=0.0039  Score=48.84  Aligned_cols=62  Identities=6%  Similarity=-0.029  Sum_probs=45.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh---------cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK---------KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~---------~~dVVIN~aGPf~  137 (184)
                      ++..|++....  .++.+.+|+......    ...++.++.+|+.|++++.++++         +.|+|||++|...
T Consensus        19 la~~l~~~g~~--~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~   93 (250)
T 1yo6_A           19 LVQQLVKDKNI--RHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLL   93 (250)
T ss_dssp             HHHHHHTCTTC--CEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCC
T ss_pred             HHHHHHhcCCC--cEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccC
Confidence            66677766543  567777776543211    12467899999999999999988         8999999998654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=96.40  E-value=0.0019  Score=52.26  Aligned_cols=92  Identities=13%  Similarity=0.121  Sum_probs=60.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-ccCCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-RENLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-~~~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+.++|-|+-                ++.+|++...   -++.+..|+.... .....++. +..|+.|++++++++++
T Consensus         4 VtGatG~iG~~----------------l~~~L~~~g~---~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~   63 (310)
T 1eq2_A            4 VTGGAGFIGSN----------------IVKALNDKGI---TDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAG   63 (310)
T ss_dssp             EETTTSHHHHH----------------HHHHHHTTTC---CCEEEEECCSSGGGGHHHHTSC-CSEEEEHHHHHHHHHTT
T ss_pred             EEcCccHHHHH----------------HHHHHHHCCC---cEEEEEccCCCCchhhhcCcce-eccccccHHHHHHHHhc
Confidence            45667777776                6777776541   1233333433211 00112334 67899999999999985


Q ss_pred             -----CcEEEecccccccc--------------chHHHHHHHHcCCCEeeCC
Q psy1304         126 -----CRVILNCVGPYTWY--------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       126 -----~dVVIN~aGPf~~~--------------g~~VaeACieAGthYVDlt  158 (184)
                           +|+||||+|+....              -..++++|.+.|+++|-++
T Consensus        64 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  115 (310)
T 1eq2_A           64 EEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYAS  115 (310)
T ss_dssp             CCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             cccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence                 99999999976431              1578999999998776543

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=96.37  E-value=0.002  Score=52.48  Aligned_cols=90  Identities=13%  Similarity=-0.006  Sum_probs=62.6

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |-+.++|=|+-                ++.+|++..    -++.+..|+...... ....++++.+|+.|++ +.+++++
T Consensus         5 VtGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~   63 (312)
T 3ko8_A            5 VTGGAGFIGSH----------------LVDKLVELG----YEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG   63 (312)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC
T ss_pred             EECCCChHHHH----------------HHHHHHhCC----CEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC
Confidence            45667777777                777887654    455555554432211 2367889999999998 9999988


Q ss_pred             CcEEEecccccccc----------------chHHHHHHHHcCC-CEeeCC
Q psy1304         126 CRVILNCVGPYTWY----------------GEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       126 ~dVVIN~aGPf~~~----------------g~~VaeACieAGt-hYVDlt  158 (184)
                       |+||||+|+....                ...++++|.+.|+ ++|-++
T Consensus        64 -d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~S  112 (312)
T 3ko8_A           64 -DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFAS  112 (312)
T ss_dssp             -SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             -CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeC
Confidence             9999999953211                1478999999998 465544

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.37  E-value=0.0033  Score=51.70  Aligned_cols=90  Identities=13%  Similarity=-0.031  Sum_probs=61.4

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc----c---CCCCCCEEEEeCCCHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR----E---NLIDIPIIIADLKNESSI  119 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~----~---~~~~v~~v~vDv~D~~sL  119 (184)
                      |-+.++|-|+-                ++.+|++..    -+|.+..|+.....    .   ...+++++.+|+.|++++
T Consensus        19 VTGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   78 (335)
T 1rpn_A           19 VTGITGQDGAY----------------LAKLLLEKG----YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSV   78 (335)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHH
T ss_pred             EECCCChHHHH----------------HHHHHHHCC----CeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHH
Confidence            35666777766                667777653    45555556543210    0   113577899999999999


Q ss_pred             HHHhhc--CcEEEecccccccc----------------chHHHHHHHHcCC--CEee
Q psy1304         120 LIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEAKT--HHVD  156 (184)
Q Consensus       120 ~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieAGt--hYVD  156 (184)
                      .+++++  .|+||||+|+....                -..++++|.+.|+  ++|-
T Consensus        79 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~  135 (335)
T 1rpn_A           79 QRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ  135 (335)
T ss_dssp             HHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence            999997  59999999975321                1478999999885  5553

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=96.33  E-value=0.0028  Score=52.39  Aligned_cols=78  Identities=10%  Similarity=-0.040  Sum_probs=51.0

Q ss_pred             hhhhhhhCCCC---CceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhh-cCcEEEecccccccc---------
Q psy1304          74 PSAYKADAPTS---NLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAK-KCRVILNCVGPYTWY---------  139 (184)
Q Consensus        74 ~~~~La~~~~~---~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~-~~dVVIN~aGPf~~~---------  139 (184)
                      ++.+|++....   +.-++.+..|+...... ...++.++.+|+.|++++.++++ ++|+||||||+....         
T Consensus        30 l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~  109 (342)
T 2hrz_A           30 LTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGY  109 (342)
T ss_dssp             HHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEEEECCCCCHHHHHHCHHHHH
T ss_pred             HHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEEEECCccCcccccccHHHHH
Confidence            55666654310   00245555565432211 12457789999999999999995 899999999976421         


Q ss_pred             ------chHHHHHHHHcC
Q psy1304         140 ------GEAVVKACIEAK  151 (184)
Q Consensus       140 ------g~~VaeACieAG  151 (184)
                            -..++++|.+.+
T Consensus       110 ~~nv~g~~~l~~~~~~~~  127 (342)
T 2hrz_A          110 RINLDGTRYLFDAIRIAN  127 (342)
T ss_dssp             HHHTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcc
Confidence                  147888998876

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=96.29  E-value=0.0033  Score=55.91  Aligned_cols=83  Identities=8%  Similarity=0.042  Sum_probs=58.3

Q ss_pred             hhhhhhhCCC-CCceeEEeeeecccccc----------------------cCCCCCCEEEEeCC------CHHHHHHHhh
Q psy1304          74 PSAYKADAPT-SNLTRLGLLGARDCLYR----------------------ENLIDIPIIIADLK------NESSILIMAK  124 (184)
Q Consensus        74 ~~~~La~~~~-~~~~~iaLAGrr~~lg~----------------------~~~~~v~~v~vDv~------D~~sL~a~l~  124 (184)
                      ++.+|++.++ +  -+|.+..|+.....                      ....++.++.+|+.      |.+++.++++
T Consensus        89 l~~~Ll~~~~~g--~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~~  166 (478)
T 4dqv_A           89 LVLELLRRLDVD--GRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAE  166 (478)
T ss_dssp             HHHHHHHHSCTT--CEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCHHHHHHHHH
T ss_pred             HHHHHHhcCCCC--CEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCHHHHHHHHc
Confidence            5666665544 5  67777777543110                      01257889999998      7789999999


Q ss_pred             cCcEEEecccccccc------------chHHHHHHHHcCC-CEeeCC
Q psy1304         125 KCRVILNCVGPYTWY------------GEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       125 ~~dVVIN~aGPf~~~------------g~~VaeACieAGt-hYVDlt  158 (184)
                      ++|+||||+|+....            -..++++|.+.|+ ++|-++
T Consensus       167 ~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iS  213 (478)
T 4dqv_A          167 TVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVS  213 (478)
T ss_dssp             HCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEE
T ss_pred             CCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence            999999999974321            1679999999997 455443

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.26  E-value=0.0066  Score=49.75  Aligned_cols=78  Identities=12%  Similarity=0.121  Sum_probs=51.8

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC--------------CCCCCEEEEeCCCHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN--------------LIDIPIIIADLKNES  117 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~--------------~~~v~~v~vDv~D~~  117 (184)
                      .++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.......              ..++.++++|+.|++
T Consensus         3 ~l~~k~~lVTGa---s~GIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   75 (274)
T 3e03_A            3 TLSGKTLFITGA---SRGIGLAIALRAARD--G--ANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREED   75 (274)
T ss_dssp             CCTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHH
T ss_pred             CCCCcEEEEECC---CChHHHHHHHHHHHC--C--CEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            467777777662   222011144555554  3  6888998876432111              135678999999999


Q ss_pred             HHHHHhh-------cCcEEEeccccc
Q psy1304         118 SILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       118 sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      +++++++       +.|++||++|..
T Consensus        76 ~v~~~~~~~~~~~g~iD~lvnnAG~~  101 (274)
T 3e03_A           76 QVRAAVAATVDTFGGIDILVNNASAI  101 (274)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcc
Confidence            9999887       689999999954

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.26  E-value=0.0026  Score=52.61  Aligned_cols=86  Identities=17%  Similarity=0.186  Sum_probs=58.4

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc---c--cCC----CCCCEEEEeCCCH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY---R--ENL----IDIPIIIADLKNE  116 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg---~--~~~----~~v~~v~vDv~D~  116 (184)
                      .|-+.++|-|+-                ++.+|++..    -++....|+....   .  ...    .+++++++|+.|+
T Consensus         9 lVTGatGfIG~~----------------l~~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   68 (337)
T 2c29_D            9 CVTGASGFIGSW----------------LVMRLLERG----YTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADE   68 (337)
T ss_dssp             EETTTTSHHHHH----------------HHHHHHHTT----CEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTST
T ss_pred             EEECCchHHHHH----------------HHHHHHHCC----CEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCH
Confidence            346667787776                667777654    3444334543210   0  011    2467889999999


Q ss_pred             HHHHHHhhcCcEEEecccccccc---------------chHHHHHHHHcC
Q psy1304         117 SSILIMAKKCRVILNCVGPYTWY---------------GEAVVKACIEAK  151 (184)
Q Consensus       117 ~sL~a~l~~~dVVIN~aGPf~~~---------------g~~VaeACieAG  151 (184)
                      +++.++++++|+|||+|+|....               -.+++++|.+++
T Consensus        69 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  118 (337)
T 2c29_D           69 GSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAK  118 (337)
T ss_dssp             TTTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999986211               046889999987

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.25  E-value=0.005  Score=51.80  Aligned_cols=49  Identities=10%  Similarity=0.057  Sum_probs=39.8

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhc--CcEEEecccccccc----------------chHHHHHHHHcCC
Q psy1304         104 IDIPIIIADLKNESSILIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEAKT  152 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieAGt  152 (184)
                      .+++++.+|+.|++++.+++++  .|+||||+|+....                -..++++|.+.++
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~  145 (375)
T 1t2a_A           79 GNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGL  145 (375)
T ss_dssp             -CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred             CCceEEEccCCCHHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            3577899999999999999987  59999999975321                1478999999986

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.22  E-value=0.0036  Score=51.43  Aligned_cols=81  Identities=9%  Similarity=0.059  Sum_probs=54.3

Q ss_pred             cccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHH
Q psy1304          48 GESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSI  119 (184)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL  119 (184)
                      .....|+||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+        ...++.++++|+.|++++
T Consensus        20 ~~~~~l~~k~~lVTGa---s~GIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (277)
T 4fc7_A           20 FCPDLLRDKVAFITGG---GSGIGFRIAEIFMRH--G--CHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAV   92 (277)
T ss_dssp             BCTTTTTTCEEEEETT---TSHHHHHHHHHHHTT--T--CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHH
T ss_pred             CCccccCCCEEEEeCC---CchHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHH
Confidence            3445588998888772   223111134444443  3  688888887532111        124678999999999999


Q ss_pred             HHHhh-------cCcEEEecccc
Q psy1304         120 LIMAK-------KCRVILNCVGP  135 (184)
Q Consensus       120 ~a~l~-------~~dVVIN~aGP  135 (184)
                      +++++       +.|+|||++|.
T Consensus        93 ~~~~~~~~~~~g~id~lv~nAg~  115 (277)
T 4fc7_A           93 MAAVDQALKEFGRIDILINCAAG  115 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCcC
Confidence            99887       68999999984

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.22  E-value=0.0041  Score=51.13  Aligned_cols=76  Identities=11%  Similarity=0.042  Sum_probs=52.2

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh------
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK------  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~------  124 (184)
                      ..|+||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.....   .....+++|+.|+++++++++      
T Consensus        10 ~~~~~k~vlVTGa---s~GIG~aia~~l~~~--G--~~V~~~~r~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           10 EEFTDKVAIVTGG---SSGIGLAVVDALVRY--G--AKVVSVSLDEKSDV---NVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             CTTTTCEEEESST---TSHHHHHHHHHHHHT--T--CEEEEEESCC--CT---TSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CEEEEEeCCchhcc---CceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            3678888877762   222111144555554  3  67888888765432   457789999999999999987      


Q ss_pred             -cCcEEEeccccc
Q psy1304         125 -KCRVILNCVGPY  136 (184)
Q Consensus       125 -~~dVVIN~aGPf  136 (184)
                       +.|+|||+||..
T Consensus        80 g~iD~lv~nAg~~   92 (269)
T 3vtz_A           80 GRIDILVNNAGIE   92 (269)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCcC
Confidence             689999999854

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.14  E-value=0.0044  Score=50.21  Aligned_cols=77  Identities=10%  Similarity=0.076  Sum_probs=50.3

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh----
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK----  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~----  124 (184)
                      ++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+    ...+..++++|+.|+++++++++    
T Consensus         6 l~~k~vlVTGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            6 LEGKSALITGS---ARGIGRAFAEAYVRE--G--ATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             TTTCEEEEETC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            55666555551   122001155556555  3  678888876543211    11457889999999999999988    


Q ss_pred             ---cCcEEEeccccc
Q psy1304         125 ---KCRVILNCVGPY  136 (184)
Q Consensus       125 ---~~dVVIN~aGPf  136 (184)
                         +.|+|||+||..
T Consensus        79 ~~g~id~lv~~Ag~~   93 (259)
T 4e6p_A           79 HAGGLDILVNNAALF   93 (259)
T ss_dssp             HSSSCCEEEECCCCC
T ss_pred             HcCCCCEEEECCCcC
Confidence               799999999954

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.12  E-value=0.0031  Score=52.16  Aligned_cols=79  Identities=10%  Similarity=0.064  Sum_probs=53.4

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .++||+.-|.|-   ++|----++.+|++.  +  .++.+.+|+.+...+       ...++.++++|+.|+++++++++
T Consensus        29 ~l~gk~~lVTGa---s~GIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~  101 (276)
T 3r1i_A           29 DLSGKRALITGA---STGIGKKVALAYAEA--G--AQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLD  101 (276)
T ss_dssp             CCTTCEEEEEST---TSHHHHHHHHHHHHT--T--CEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            466777766662   122001145555554  3  678888887643221       12468899999999999999998


Q ss_pred             -------cCcEEEecccccc
Q psy1304         125 -------KCRVILNCVGPYT  137 (184)
Q Consensus       125 -------~~dVVIN~aGPf~  137 (184)
                             +.|+|||+||...
T Consensus       102 ~~~~~~g~iD~lvnnAg~~~  121 (276)
T 3r1i_A          102 QMTGELGGIDIAVCNAGIVS  121 (276)
T ss_dssp             HHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHcCCCCEEEECCCCCC
Confidence                   7899999999754

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.11  E-value=0.004  Score=50.31  Aligned_cols=59  Identities=10%  Similarity=0.095  Sum_probs=43.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC--------CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN--------LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~--------~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+.        ..++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        23 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~   96 (263)
T 3ai3_A           23 IAEGFAKE--G--AHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTG   96 (263)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            56666655  3  6788888865422110        2457789999999999999987       789999999964

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=96.11  E-value=0.0023  Score=51.25  Aligned_cols=52  Identities=13%  Similarity=0.116  Sum_probs=41.0

Q ss_pred             CCEEEEeCCCHHHHHHHhhc--CcEEEeccccccc-------------c----chHHHHHHHHcCCC-EeeC
Q psy1304         106 IPIIIADLKNESSILIMAKK--CRVILNCVGPYTW-------------Y----GEAVVKACIEAKTH-HVDI  157 (184)
Q Consensus       106 v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~-------------~----g~~VaeACieAGth-YVDl  157 (184)
                      ++++++|+.|++++.+++++  +|+||||+|+...             .    -..++++|.+.|+. +|-+
T Consensus        40 ~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~  111 (319)
T 4b8w_A           40 VSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSC  111 (319)
T ss_dssp             CCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             cCceecccCCHHHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence            45567899999999999998  9999999998531             0    04689999999985 5543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.09  E-value=0.008  Score=49.10  Aligned_cols=55  Identities=16%  Similarity=0.063  Sum_probs=42.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+...+    .++.++++|+.|+++++++++       +.|+|||++|..
T Consensus        24 ia~~l~~~G----~~V~~~~r~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~   85 (264)
T 2dtx_A           24 IAERFVDEG----SKVIDLSIHDPGE----AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE   85 (264)
T ss_dssp             HHHHHHHTT----CEEEEEESSCCCS----CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEecCcccC----CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            556666553    5777777766542    467899999999999999887       689999999954

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.09  E-value=0.0066  Score=50.57  Aligned_cols=91  Identities=9%  Similarity=0.012  Sum_probs=59.8

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc----cC--------CCCCCEEEEeCC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR----EN--------LIDIPIIIADLK  114 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~----~~--------~~~v~~v~vDv~  114 (184)
                      |.+.++|=|+-                ++.+|++..    .+|.+..|+.....    ..        ..++.++.+|+.
T Consensus         6 VtGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   65 (372)
T 1db3_A            6 ITGVTGQDGSY----------------LAEFLLEKG----YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLS   65 (372)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEECC---------------------CCEEECCCCSS
T ss_pred             EECCCChHHHH----------------HHHHHHHCC----CEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCC
Confidence            45666777776                667777653    45555556532110    00        135678889999


Q ss_pred             CHHHHHHHhhc--CcEEEecccccccc----------------chHHHHHHHHcCC----CEeeC
Q psy1304         115 NESSILIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEAKT----HHVDI  157 (184)
Q Consensus       115 D~~sL~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieAGt----hYVDl  157 (184)
                      |++++.+++++  .|+||||+|+....                -..++++|.+.++    ++|-+
T Consensus        66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~  130 (372)
T 1db3_A           66 DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQA  130 (372)
T ss_dssp             CHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEE
T ss_pred             CHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence            99999999987  69999999975311                1468899999986    55543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.03  E-value=0.008  Score=49.09  Aligned_cols=75  Identities=11%  Similarity=0.091  Sum_probs=50.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh-------c
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK-------K  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~-------~  125 (184)
                      ++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.....  ..++.++++|+.|+++++++++       +
T Consensus        26 ~~~k~vlVTGa---s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   96 (260)
T 3un1_A           26 NQQKVVVITGA---SQGIGAGLVRAYRDR--N--YRVVATSRSIKPSA--DPDIHTVAGDISKPETADRIVREGIERFGR   96 (260)
T ss_dssp             TTCCEEEESSC---SSHHHHHHHHHHHHT--T--CEEEEEESSCCCCS--STTEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CEEEEEeCChhhcc--cCceEEEEccCCCHHHHHHHHHHHHHHCCC
Confidence            45666555551   112001155556555  3  67888888765432  2468899999999999999988       7


Q ss_pred             CcEEEeccccc
Q psy1304         126 CRVILNCVGPY  136 (184)
Q Consensus       126 ~dVVIN~aGPf  136 (184)
                      .|+|||+||..
T Consensus        97 iD~lv~nAg~~  107 (260)
T 3un1_A           97 IDSLVNNAGVF  107 (260)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999854

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.02  E-value=0.0037  Score=51.70  Aligned_cols=82  Identities=12%  Similarity=0.025  Sum_probs=53.7

Q ss_pred             cccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          48 GESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ..+..++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+    ...++.++++|+.|++++++++
T Consensus        20 ~~~~~l~~k~vlVTGa---s~GIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   92 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGG---GSGIGRATAELFAKN--G--AYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMV   92 (277)
T ss_dssp             --CCTTTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHH
Confidence            4555677888777762   222011144444444  3  678888887642211    1246788999999999999998


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|+|||+||..
T Consensus        93 ~~~~~~~g~iD~lv~nAg~~  112 (277)
T 4dqx_A           93 EKTTAKWGRVDVLVNNAGFG  112 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            7       689999999954

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=96.02  E-value=0.002  Score=52.58  Aligned_cols=48  Identities=23%  Similarity=0.441  Sum_probs=37.9

Q ss_pred             CCCEEEEeCCCHHHHHHHhhcCcEEEecccccccc---------------chHHHHHHHHc-CC
Q psy1304         105 DIPIIIADLKNESSILIMAKKCRVILNCVGPYTWY---------------GEAVVKACIEA-KT  152 (184)
Q Consensus       105 ~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~---------------g~~VaeACieA-Gt  152 (184)
                      ++.++.+|+.|++++.++++++|+|||||+|....               ...++++|.+. |+
T Consensus        54 ~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~  117 (322)
T 2p4h_X           54 KLHFFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTV  117 (322)
T ss_dssp             HEEECCCCTTCGGGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred             ceEEEecCCCCHHHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            35678899999999999999999999999875210               14678889887 65

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=95.99  E-value=0.0045  Score=51.55  Aligned_cols=81  Identities=10%  Similarity=0.024  Sum_probs=53.1

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ..++||+.-|.|--. +||----++..|++.  +  .++.+.+|++.....      ..+...++++|+.|+++++++++
T Consensus        26 ~~l~~k~vlVTGasg-~~GIG~~ia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           26 MLMEGKKGVIIGVAN-DKSLAWGIAKAVCAQ--G--AEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             CTTTTCEEEEECCCS-TTSHHHHHHHHHHHT--T--CEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCC-CCCHHHHHHHHHHHC--C--CEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHH
Confidence            457888888877210 022111145555554  3  778888887532110      11456799999999999999987


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             +.|++||+||-.
T Consensus       101 ~~~~~~g~iD~lVnnAG~~  119 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFS  119 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCCcC
Confidence                   569999999854

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=95.98  E-value=0.0035  Score=51.03  Aligned_cols=79  Identities=9%  Similarity=0.068  Sum_probs=53.0

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ..++||+.-|.|-   ++|--.-++..|++.  +  .++.+.+|+.+...+       ...++.++++|+.|++++++++
T Consensus         7 ~~l~~k~vlVTGa---s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (264)
T 3ucx_A            7 GLLTDKVVVISGV---GPALGTTLARRCAEQ--G--ADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLV   79 (264)
T ss_dssp             CTTTTCEEEEESC---CTTHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCcCCcEEEEECC---CcHHHHHHHHHHHHC--c--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            3477888777762   222111144555544  3  678888886542211       1256789999999999999998


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|++||++|.+
T Consensus        80 ~~~~~~~g~id~lv~nAg~~   99 (264)
T 3ucx_A           80 DETMKAYGRVDVVINNAFRV   99 (264)
T ss_dssp             HHHHHHTSCCSEEEECCCSC
T ss_pred             HHHHHHcCCCcEEEECCCCC
Confidence            7       579999999764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=95.97  E-value=0.0055  Score=48.31  Aligned_cols=59  Identities=15%  Similarity=0.065  Sum_probs=43.0

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+......        ...++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        23 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   96 (248)
T 2pnf_A           23 IAEKLASA--G--STVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGIT   96 (248)
T ss_dssp             HHHHHHHT--T--CEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            56666664  3  577777776532110        12457889999999999999987       799999999964

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=95.96  E-value=0.0076  Score=48.55  Aligned_cols=59  Identities=10%  Similarity=0.066  Sum_probs=43.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+...+       ...++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        18 ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~   90 (256)
T 1geg_A           18 IALRLVKDG----FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVA   90 (256)
T ss_dssp             HHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            667777653    577788876532111       12457789999999999999988       799999999843

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=95.95  E-value=0.0051  Score=50.58  Aligned_cols=77  Identities=13%  Similarity=0.060  Sum_probs=50.1

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHHHHHHhh-------
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESSILIMAK-------  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~sL~a~l~-------  124 (184)
                      +.||+.-|.|-   ++|----++..|++..    .++.+.+|+.+...+. ..+..++++|+.|+++++++++       
T Consensus        14 ~~~k~vlVTGa---s~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (266)
T 3p19_A           14 SMKKLVVITGA---SSGIGEAIARRFSEEG----HPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYG   86 (266)
T ss_dssp             -CCCEEEEEST---TSHHHHHHHHHHHHTT----CCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence            55666555551   1220001455555543    6788888876533222 2467889999999999999987       


Q ss_pred             cCcEEEeccccc
Q psy1304         125 KCRVILNCVGPY  136 (184)
Q Consensus       125 ~~dVVIN~aGPf  136 (184)
                      +.|+|||+||..
T Consensus        87 ~iD~lvnnAg~~   98 (266)
T 3p19_A           87 PADAIVNNAGMM   98 (266)
T ss_dssp             SEEEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            689999999965

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=95.94  E-value=0.017  Score=47.63  Aligned_cols=53  Identities=11%  Similarity=0.121  Sum_probs=41.0

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhc--CcEEEecccccccc----------------chHHHHHHHHcCC-CEee
Q psy1304         104 IDIPIIIADLKNESSILIMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEAKT-HHVD  156 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieAGt-hYVD  156 (184)
                      .++.++.+|+.|++++.+++++  +|+||||||+....                -..++++|.+.|+ ++|-
T Consensus        50 ~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~  121 (338)
T 1udb_A           50 KHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIF  121 (338)
T ss_dssp             SCCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CcceEEEccCCCHHHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            3577899999999999999984  89999999964310                1467889988887 3443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.93  E-value=0.0046  Score=49.53  Aligned_cols=82  Identities=9%  Similarity=0.066  Sum_probs=52.1

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ..++||++-|.|--. .+|----++.+|++.  +  .++.+.+|++....      ...+++.++++|+.|+++++++++
T Consensus        10 ~~~~~k~vlITGa~~-~~giG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A           10 GFLDGKRILLTGLLS-NRSIAYGIAKACKRE--G--AELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             CTTTTCEEEECCCCS-TTSHHHHHHHHHHHT--T--CEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCC-CCcHHHHHHHHHHHc--C--CCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHH
Confidence            356777777766210 011001145555554  3  67888877642111      122568899999999999999987


Q ss_pred             -------cCcEEEecccccc
Q psy1304         125 -------KCRVILNCVGPYT  137 (184)
Q Consensus       125 -------~~dVVIN~aGPf~  137 (184)
                             +.|+|||+||...
T Consensus        85 ~~~~~~g~id~lv~nAg~~~  104 (271)
T 3ek2_A           85 SLKTHWDSLDGLVHSIGFAP  104 (271)
T ss_dssp             HHHHHCSCEEEEEECCCCCC
T ss_pred             HHHHHcCCCCEEEECCccCc
Confidence                   4599999998653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.92  E-value=0.0066  Score=49.38  Aligned_cols=79  Identities=16%  Similarity=0.204  Sum_probs=50.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-----ccCCCCCCEEEEeCCCHHHHHHHhh---
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-----RENLIDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-----~~~~~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      ++||+.-|.|-- .++|--.-++.+|++.  +  .++.+.+|+....     .....++.++.+|+.|+++++++++   
T Consensus         5 l~~k~vlVTGa~-~s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            5 LDGKRILVSGII-TDSSIAFHIARVAQEQ--G--AQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             TTTCEEEECCCS-STTSHHHHHHHHHHHT--T--CEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCC-CCCchHHHHHHHHHHC--C--CEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHH
Confidence            566666665510 0122011155566655  3  6788888765321     1111467899999999999999987   


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             +.|+|||++|..
T Consensus        80 ~~~g~~~~iD~lv~nAg~~   98 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFM   98 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCC
T ss_pred             HHhCCCCCceEEEECCccC
Confidence                   789999999854

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.92  E-value=0.0016  Score=53.25  Aligned_cols=75  Identities=4%  Similarity=-0.055  Sum_probs=51.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEE-EEeCCCHHHHHHHhhcCcEEEecccccccc-----
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPII-IADLKNESSILIMAKKCRVILNCVGPYTWY-----  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v-~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~-----  139 (184)
                      ++.+|++..    -++.+..|+......        ...+++++ .+|+.|++++.++++++|+||||||+....     
T Consensus        27 l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~  102 (342)
T 1y1p_A           27 VVEQLLEHG----YKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDE  102 (342)
T ss_dssp             HHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECCCCCSCCSCHHH
T ss_pred             HHHHHHHCC----CEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEEeCCCCCCCCCHHH
Confidence            566666553    456666665432110        01457777 789999999999999999999999986421     


Q ss_pred             --------chHHHHHHHH-cCC
Q psy1304         140 --------GEAVVKACIE-AKT  152 (184)
Q Consensus       140 --------g~~VaeACie-AGt  152 (184)
                              ...++++|.+ .|+
T Consensus       103 ~~~~n~~g~~~ll~~~~~~~~~  124 (342)
T 1y1p_A          103 VVTPAIGGTLNALRAAAATPSV  124 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCC
Confidence                    1578899984 554

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=95.87  E-value=0.0078  Score=49.72  Aligned_cols=77  Identities=13%  Similarity=0.156  Sum_probs=51.5

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------------CCCCCCEEEEeCCCHHH
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------------NLIDIPIIIADLKNESS  118 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------------~~~~v~~v~vDv~D~~s  118 (184)
                      ++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+....              ...++.++++|+.|+++
T Consensus         7 l~~k~vlVTGa---s~GIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   79 (285)
T 3sc4_A            7 LRGKTMFISGG---SRGIGLAIAKRVAAD--G--ANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDA   79 (285)
T ss_dssp             CTTCEEEEESC---SSHHHHHHHHHHHTT--T--CEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHH
T ss_pred             CCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            56777766661   122001144445444  3  688888887653211              11457889999999999


Q ss_pred             HHHHhh-------cCcEEEeccccc
Q psy1304         119 ILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       119 L~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++++++       +.|++||+||..
T Consensus        80 v~~~~~~~~~~~g~id~lvnnAg~~  104 (285)
T 3sc4_A           80 VAAAVAKTVEQFGGIDICVNNASAI  104 (285)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCC
Confidence            999988       789999999954

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=95.85  E-value=0.0029  Score=51.61  Aligned_cols=78  Identities=13%  Similarity=0.143  Sum_probs=51.4

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------C-CCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------N-LIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~-~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .++||+.-|.|-   ++|----++.+|++.  +  .++.+.+|+.+....       . ..++.++++|+.|++++++++
T Consensus         7 ~l~~k~vlVTGa---s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (262)
T 3pk0_A            7 DLQGRSVVVTGG---TKGIGRGIATVFARA--G--ANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALA   79 (262)
T ss_dssp             CCTTCEEEETTC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHH
Confidence            366777766662   122001144455544  3  678888886542211       1 146789999999999999998


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|++||+||.+
T Consensus        80 ~~~~~~~g~id~lvnnAg~~   99 (262)
T 3pk0_A           80 GRAVEEFGGIDVVCANAGVF   99 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHhCCCCEEEECCCCC
Confidence            7       789999999954

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=95.85  E-value=0.0049  Score=51.46  Aligned_cols=78  Identities=17%  Similarity=0.202  Sum_probs=51.8

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .|+||+.-|.|--   +|----++.+|++.  +  .++.+.+|+.+...+       ...++.++++|+.|+++++++++
T Consensus        28 ~l~gk~vlVTGas---~gIG~~la~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~  100 (301)
T 3tjr_A           28 GFDGRAAVVTGGA---SGIGLATATEFARR--G--ARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLAD  100 (301)
T ss_dssp             CSTTCEEEEETTT---SHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCC---CHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            3677777776621   12001144555544  3  678888887543211       12467899999999999999987


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             +.|+|||+||..
T Consensus       101 ~~~~~~g~id~lvnnAg~~  119 (301)
T 3tjr_A          101 EAFRLLGGVDVVFSNAGIV  119 (301)
T ss_dssp             HHHHHHSSCSEEEECCCCC
T ss_pred             HHHHhCCCCCEEEECCCcC
Confidence                   689999999954

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=95.85  E-value=0.002  Score=52.08  Aligned_cols=78  Identities=14%  Similarity=0.083  Sum_probs=52.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC----CCCCCEEEEeCCCHHHHHHHhh---
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN----LIDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      .++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+.    ..++.++++|+.|+++++++++   
T Consensus         3 ~l~gk~vlVTGa---s~gIG~a~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   75 (247)
T 3rwb_A            3 RLAGKTALVTGA---AQGIGKAIAARLAAD--G--ATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQ   75 (247)
T ss_dssp             TTTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            467777777662   122011144555544  3  6788888876432211    2467889999999999999988   


Q ss_pred             ----cCcEEEeccccc
Q psy1304         125 ----KCRVILNCVGPY  136 (184)
Q Consensus       125 ----~~dVVIN~aGPf  136 (184)
                          +.|++||++|..
T Consensus        76 ~~~g~id~lv~nAg~~   91 (247)
T 3rwb_A           76 ALTGGIDILVNNASIV   91 (247)
T ss_dssp             HHHSCCSEEEECCCCC
T ss_pred             HHCCCCCEEEECCCCC
Confidence                689999999954

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.85  E-value=0.0054  Score=48.59  Aligned_cols=59  Identities=12%  Similarity=-0.026  Sum_probs=43.1

Q ss_pred             hhhhhhh-CCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKAD-APTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~-~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++ ..    .++.+.+|+......       ...++.++.+|+.|+++++++++       +.|+|||+||..
T Consensus        20 ~a~~L~~~~g----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~   93 (276)
T 1wma_A           20 IVRDLCRLFS----GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA   93 (276)
T ss_dssp             HHHHHHHHSS----SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred             HHHHHHHhcC----CeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccc
Confidence            6666665 43    567777776432110       12468899999999999999988       789999999954

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.84  E-value=0.0082  Score=48.42  Aligned_cols=82  Identities=11%  Similarity=0.150  Sum_probs=55.2

Q ss_pred             ccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeCCCHHHHH
Q psy1304          49 ESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv~D~~sL~  120 (184)
                      ....++||+.-|.|--  |+|--.-++.+|++.  +  .++.+.+|+.+...        ....++.++++|+.|+++++
T Consensus        16 ~~~~l~~k~vlITGas--g~GIG~~~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~   89 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAA--GTGIGSTTARRALLE--G--ADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVD   89 (266)
T ss_dssp             CCSTTTTCEEEESSCS--SSSHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHH
T ss_pred             cccCCCCCEEEEECCC--CCchHHHHHHHHHHC--C--CEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHH
Confidence            3455889998888732  122111245555554  3  67888887653211        11246889999999999999


Q ss_pred             HHhh-------cCcEEEeccccc
Q psy1304         121 IMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       121 a~l~-------~~dVVIN~aGPf  136 (184)
                      ++++       +.|+|||++|..
T Consensus        90 ~~~~~~~~~~g~id~li~~Ag~~  112 (266)
T 3o38_A           90 ALITQTVEKAGRLDVLVNNAGLG  112 (266)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHhCCCcEEEECCCcC
Confidence            9987       469999999954

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.84  E-value=0.0058  Score=48.31  Aligned_cols=58  Identities=22%  Similarity=0.277  Sum_probs=42.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeec-cccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGAR-DCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr-~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++.+|++.  +  .++.+.+|+ ......       ...++.++.+|+.|+++++++++       +.|+|||++|.
T Consensus        23 ~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~   95 (258)
T 3afn_B           23 TARLFARA--G--AKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGG   95 (258)
T ss_dssp             HHHHHHHT--T--CEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred             HHHHHHHC--C--CEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            66666664  3  577777776 322110       12457889999999999999998       89999999995

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.84  E-value=0.013  Score=47.20  Aligned_cols=56  Identities=7%  Similarity=0.094  Sum_probs=42.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.++.  ..+ +.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        23 ia~~l~~~G----~~V~~~~r~~~~~--~~~-~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~   85 (250)
T 2fwm_X           23 TALAFVEAG----AKVTGFDQAFTQE--QYP-FATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGIL   85 (250)
T ss_dssp             HHHHHHHTT----CEEEEEESCCCSS--CCS-SEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCchhhh--cCC-ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            555666553    6777887876542  222 7889999999999999987       689999999954

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=95.82  E-value=0.015  Score=53.75  Aligned_cols=72  Identities=18%  Similarity=0.158  Sum_probs=50.3

Q ss_pred             eeEEeeeeccccccc--CCCCCCEEEEeCCCHHH-HHHHhhcCcEEEeccccccc----------------cchHHHHHH
Q psy1304          87 TRLGLLGARDCLYRE--NLIDIPIIIADLKNESS-ILIMAKKCRVILNCVGPYTW----------------YGEAVVKAC  147 (184)
Q Consensus        87 ~~iaLAGrr~~lg~~--~~~~v~~v~vDv~D~~s-L~a~l~~~dVVIN~aGPf~~----------------~g~~VaeAC  147 (184)
                      -+|.+..|+......  ...+++++.+|+.|+++ ++++++++|+||||+|....                ....++++|
T Consensus       341 ~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa  420 (660)
T 1z7e_A          341 YEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC  420 (660)
T ss_dssp             EEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHH
T ss_pred             CEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHH
Confidence            566666665432211  12467889999999765 88899999999999986431                015789999


Q ss_pred             HHcCCCEeeCC
Q psy1304         148 IEAKTHHVDIT  158 (184)
Q Consensus       148 ieAGthYVDlt  158 (184)
                      .+.|.++|-++
T Consensus       421 ~~~~~r~V~~S  431 (660)
T 1z7e_A          421 VKYRKRIIFPS  431 (660)
T ss_dssp             HHTTCEEEEEC
T ss_pred             HHhCCEEEEEe
Confidence            99886666544

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=95.82  E-value=0.0028  Score=53.54  Aligned_cols=75  Identities=13%  Similarity=0.154  Sum_probs=49.3

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCC--CCCceeEEeeeeccccccc-------CC--CCCCEEEEeCCCHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAP--TSNLTRLGLLGARDCLYRE-------NL--IDIPIIIADLKNESSIL  120 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~--~~~~~~iaLAGrr~~lg~~-------~~--~~v~~v~vDv~D~~sL~  120 (184)
                      .++||+.-|.|-   ++|    |..++++..  .+  .++.+.+|+.+....       ..  .++.++.+|+.|++++.
T Consensus         5 ~l~~k~vlVTGa---s~g----IG~~la~~l~~~G--~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~   75 (319)
T 3ioy_A            5 DFAGRTAFVTGG---ANG----VGIGLVRQLLNQG--CKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFK   75 (319)
T ss_dssp             CCTTCEEEEETT---TST----HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHH
T ss_pred             CCCCCEEEEcCC---chH----HHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHH
Confidence            356777666651   122    444444211  23  678888887643211       01  26788999999999999


Q ss_pred             HHhhc-------CcEEEecccc
Q psy1304         121 IMAKK-------CRVILNCVGP  135 (184)
Q Consensus       121 a~l~~-------~dVVIN~aGP  135 (184)
                      ++++.       .|+|||+||.
T Consensus        76 ~~~~~~~~~~g~id~lv~nAg~   97 (319)
T 3ioy_A           76 MAADEVEARFGPVSILCNNAGV   97 (319)
T ss_dssp             HHHHHHHHHTCCEEEEEECCCC
T ss_pred             HHHHHHHHhCCCCCEEEECCCc
Confidence            99874       5999999994

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=95.81  E-value=0.0066  Score=48.31  Aligned_cols=60  Identities=15%  Similarity=0.289  Sum_probs=43.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      ++.+|++.  +  .++.+.+|+......       ...++.++++|+.|+++++++++       +.|+|||++|...
T Consensus        29 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~  102 (260)
T 3awd_A           29 CVTALAEA--G--ARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICI  102 (260)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            55666654  3  678888876532110       12467899999999999999887       6899999999543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.79  E-value=0.011  Score=48.43  Aligned_cols=77  Identities=13%  Similarity=0.129  Sum_probs=49.8

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------------CCCCCCEEEEeCCCHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------------NLIDIPIIIADLKNESSI  119 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------------~~~~v~~v~vDv~D~~sL  119 (184)
                      .++||+.-|.|-   .+|---.++.+|++.  +  .++.+.+|+.+....            ...++.++++|+.|++++
T Consensus        15 ~l~~k~vlVTGa---sggIG~~la~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v   87 (303)
T 1yxm_A           15 LLQGQVAIVTGG---ATGIGKAIVKELLEL--G--SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEV   87 (303)
T ss_dssp             TTTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHH
Confidence            466676666651   111001145555554  3  578888876532110            124678999999999999


Q ss_pred             HHHhhc-------CcEEEecccc
Q psy1304         120 LIMAKK-------CRVILNCVGP  135 (184)
Q Consensus       120 ~a~l~~-------~dVVIN~aGP  135 (184)
                      .++++.       .|+|||+||.
T Consensus        88 ~~~~~~~~~~~g~id~li~~Ag~  110 (303)
T 1yxm_A           88 NNLVKSTLDTFGKINFLVNNGGG  110 (303)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            999875       8999999994

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=95.78  E-value=0.018  Score=53.16  Aligned_cols=87  Identities=9%  Similarity=0.008  Sum_probs=60.2

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeCCCHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADLKNESS  118 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv~D~~s  118 (184)
                      |.+.++|-|+-                ++.+|++..    -+|.+..|+.....        ....++.++++|+.|+++
T Consensus        16 VTGatG~IG~~----------------l~~~L~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~   75 (699)
T 1z45_A           16 VTGGAGYIGSH----------------TVVELIENG----YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKG   75 (699)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHH
T ss_pred             EECCCCHHHHH----------------HHHHHHHCc----CEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHH
Confidence            45566677766                667777653    45555555432110        012568899999999999


Q ss_pred             HHHHhh--cCcEEEecccccccc----------------chHHHHHHHHcCCC
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWY----------------GEAVVKACIEAKTH  153 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~----------------g~~VaeACieAGth  153 (184)
                      +.++++  ++|+||||||+....                -..++++|.+.|+.
T Consensus        76 l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~  128 (699)
T 1z45_A           76 LEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVS  128 (699)
T ss_dssp             HHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            999999  899999999976421                14688999998864

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=95.78  E-value=0.0048  Score=51.11  Aligned_cols=79  Identities=14%  Similarity=0.088  Sum_probs=52.6

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh---
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      .++||+.-|.|-   ++|--.-++..|++.  +  .++.+.+|+.+...+    ...++.++++|+.|+++++++++   
T Consensus        26 ~l~gk~vlVTGa---s~gIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (277)
T 3gvc_A           26 DLAGKVAIVTGA---GAGIGLAVARRLADE--G--CHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACV   98 (277)
T ss_dssp             -CTTCEEEETTT---TSTHHHHHHHHHHHT--T--CEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHH
Confidence            467887777662   222111144455544  4  678888887543221    12467899999999999999887   


Q ss_pred             ----cCcEEEecccccc
Q psy1304         125 ----KCRVILNCVGPYT  137 (184)
Q Consensus       125 ----~~dVVIN~aGPf~  137 (184)
                          +.|+|||++|...
T Consensus        99 ~~~g~iD~lvnnAg~~~  115 (277)
T 3gvc_A           99 AAFGGVDKLVANAGVVH  115 (277)
T ss_dssp             HHHSSCCEEEECCCCCC
T ss_pred             HHcCCCCEEEECCCCCC
Confidence                6799999999753

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=95.77  E-value=0.0054  Score=50.23  Aligned_cols=79  Identities=8%  Similarity=0.045  Sum_probs=52.3

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .|+||+.-|.|-- -+||----++..|++..    .++.+.+|+++...+        ...+..++++|+.|++++++++
T Consensus         3 ~l~gK~alVTGaa-~~~GIG~aiA~~la~~G----a~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   77 (256)
T 4fs3_A            3 NLENKTYVIMGIA-NKRSIAFGVAKVLDQLG----AKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGF   77 (256)
T ss_dssp             CCTTCEEEEECCC-STTCHHHHHHHHHHHTT----CEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCC-CCchHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHH
Confidence            4789998887611 01330011444555544    789999987542211        1146788999999999998887


Q ss_pred             h-------cCcEEEecccc
Q psy1304         124 K-------KCRVILNCVGP  135 (184)
Q Consensus       124 ~-------~~dVVIN~aGP  135 (184)
                      +       +.|++||++|-
T Consensus        78 ~~~~~~~G~iD~lvnnAg~   96 (256)
T 4fs3_A           78 EQIGKDVGNIDGVYHSIAF   96 (256)
T ss_dssp             HHHHHHHCCCSEEEECCCC
T ss_pred             HHHHHHhCCCCEEEecccc
Confidence            6       58999999983

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=95.77  E-value=0.0045  Score=49.97  Aligned_cols=59  Identities=8%  Similarity=-0.008  Sum_probs=42.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CC-CCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NL-IDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~-~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+   .. .++.++++|+.|+++++++++       +.|+|||++|..
T Consensus        28 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~   97 (263)
T 3ak4_A           28 IARALDKA--G--ATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVS   97 (263)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            55556654  3  678788776532211   11 257789999999999999988       799999999954

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=95.76  E-value=0.0046  Score=49.65  Aligned_cols=79  Identities=11%  Similarity=0.089  Sum_probs=52.3

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh---
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      .++||+.-|-|--   +|--.-++.+|++.  +  .++.+.+|+.....+    ...++.++.+|+.|+++++++++   
T Consensus         6 ~l~~k~vlITGas---~gIG~~~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            6 SLEGKVALITGAG---SGFGEGMAKRFAKG--G--AKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             TTTTCEEEEETTT---SHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCC---chHHHHHHHHHHHC--C--CEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHH
Confidence            4566766666521   12001155555554  3  678888887643221    12467899999999999999988   


Q ss_pred             ----cCcEEEecccccc
Q psy1304         125 ----KCRVILNCVGPYT  137 (184)
Q Consensus       125 ----~~dVVIN~aGPf~  137 (184)
                          +.|+|||++|...
T Consensus        79 ~~~g~id~li~~Ag~~~   95 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGH   95 (261)
T ss_dssp             HHHSCCCEEEECCCCCC
T ss_pred             HhcCCCCEEEECCccCC
Confidence                6799999999654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=95.75  E-value=0.0071  Score=49.18  Aligned_cols=59  Identities=15%  Similarity=0.075  Sum_probs=43.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+...+    ...++.++++|+.|+++++++++       +.|+|||+||..
T Consensus        21 ~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~   90 (281)
T 3m1a_A           21 IAEAAVAAG----DTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRT   90 (281)
T ss_dssp             HHHHHHHTT----CEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCE
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence            556666543    577777776543221    12568899999999999999988       689999999964

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.73  E-value=0.0046  Score=49.74  Aligned_cols=59  Identities=10%  Similarity=0.130  Sum_probs=42.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+......      ...++.++.+|+.|++++.++++       +.|+|||++|..
T Consensus        32 ~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~  103 (278)
T 2bgk_A           32 TAKLFVRY--G--AKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVL  103 (278)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence            55556654  3  567777775432110      11267899999999999999987       789999999854

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=95.72  E-value=0.0061  Score=48.64  Aligned_cols=59  Identities=15%  Similarity=0.121  Sum_probs=42.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC----CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN----LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.....+.    ..++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        28 ~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~   97 (265)
T 2o23_A           28 TAERLVGQ--G--ASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIA   97 (265)
T ss_dssp             HHHHHHHT--T--CEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccC
Confidence            55556554  3  5777777765422110    1467889999999999999998       899999999954

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=95.72  E-value=0.01  Score=51.28  Aligned_cols=80  Identities=13%  Similarity=0.096  Sum_probs=54.6

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------------CCCCCCEEEEeCCC
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------------NLIDIPIIIADLKN  115 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------------~~~~v~~v~vDv~D  115 (184)
                      ...|+||+.-|.|-   .+|--.-++..|++.  +  .++.+.+|+.+....              ...++.++++|+.|
T Consensus        40 ~~~l~gk~vlVTGa---s~GIG~aia~~La~~--G--a~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d  112 (346)
T 3kvo_A           40 TGRLAGCTVFITGA---SRGIGKAIALKAAKD--G--ANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD  112 (346)
T ss_dssp             CSTTTTCEEEEETT---TSHHHHHHHHHHHTT--T--CEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC
T ss_pred             CCCCCCCEEEEeCC---ChHHHHHHHHHHHHC--C--CEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC
Confidence            45678998888872   223011134444443  3  789999887653211              11457789999999


Q ss_pred             HHHHHHHhh-------cCcEEEeccccc
Q psy1304         116 ESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       116 ~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      +++++++++       +.|+|||+||..
T Consensus       113 ~~~v~~~~~~~~~~~g~iDilVnnAG~~  140 (346)
T 3kvo_A          113 EQQISAAVEKAIKKFGGIDILVNNASAI  140 (346)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            999999987       789999999954

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=95.72  E-value=0.0058  Score=50.46  Aligned_cols=59  Identities=20%  Similarity=0.159  Sum_probs=44.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+    ...++.++++|+.|+++++++++       +.|+|||+||..
T Consensus        44 ia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~  113 (272)
T 4dyv_A           44 VAVALAGA--G--YGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTG  113 (272)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55666655  3  678888887543221    11568899999999999999988       799999999964

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=95.70  E-value=0.0036  Score=51.53  Aligned_cols=78  Identities=15%  Similarity=0.118  Sum_probs=52.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC----CCCCCEEEEeCCCHHHHHHHhhc--
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN----LIDIPIIIADLKNESSILIMAKK--  125 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v~~v~vDv~D~~sL~a~l~~--  125 (184)
                      .++||+.-|.|-   .+|--.-++.+|++.  +  .++.+.+|+.......    ..++.++++|+.|+++++++++.  
T Consensus        13 ~l~gk~vlVTGa---s~gIG~~~a~~L~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   85 (291)
T 3rd5_A           13 SFAQRTVVITGA---NSGLGAVTARELARR--G--ATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVS   85 (291)
T ss_dssp             CCTTCEEEEECC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCCCCEEEEeCC---CChHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcC
Confidence            366777766651   112001144455544  3  6888888876433211    14678999999999999999984  


Q ss_pred             -CcEEEeccccc
Q psy1304         126 -CRVILNCVGPY  136 (184)
Q Consensus       126 -~dVVIN~aGPf  136 (184)
                       .|+|||+||.+
T Consensus        86 ~iD~lv~nAg~~   97 (291)
T 3rd5_A           86 GADVLINNAGIM   97 (291)
T ss_dssp             CEEEEEECCCCC
T ss_pred             CCCEEEECCcCC
Confidence             59999999965

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=95.69  E-value=0.018  Score=46.06  Aligned_cols=47  Identities=15%  Similarity=0.130  Sum_probs=38.0

Q ss_pred             eeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh-----cCcEEEeccccc
Q psy1304          87 TRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK-----KCRVILNCVGPY  136 (184)
Q Consensus        87 ~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~-----~~dVVIN~aGPf  136 (184)
                      .++.+.+|++...   ...+.++++|+.|+++++++++     +.|++||+||..
T Consensus        30 ~~v~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~   81 (244)
T 4e4y_A           30 HTVINIDIQQSFS---AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGIL   81 (244)
T ss_dssp             EEEEEEESSCCCC---CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCC
T ss_pred             cEEEEeccccccc---cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccC
Confidence            6777777766532   2567899999999999999997     679999999954

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=95.68  E-value=0.0056  Score=50.13  Aligned_cols=78  Identities=15%  Similarity=0.074  Sum_probs=52.4

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh---
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      .++||+.-|.|-   ++|--.-++.+|++..    .++.+.+|+.+...+    ...+..++++|+.|+++++++++   
T Consensus         8 ~l~~k~vlVTGa---s~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (271)
T 3tzq_B            8 ELENKVAIITGA---CGGIGLETSRVLARAG----ARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTI   80 (271)
T ss_dssp             TTTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECC---CcHHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHH
Confidence            466777666651   1220011455555543    678888887643211    12567899999999999999998   


Q ss_pred             ----cCcEEEeccccc
Q psy1304         125 ----KCRVILNCVGPY  136 (184)
Q Consensus       125 ----~~dVVIN~aGPf  136 (184)
                          +.|++||++|..
T Consensus        81 ~~~g~id~lv~nAg~~   96 (271)
T 3tzq_B           81 DTFGRLDIVDNNAAHS   96 (271)
T ss_dssp             HHHSCCCEEEECCCCC
T ss_pred             HHcCCCCEEEECCCCC
Confidence                789999999965

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.68  E-value=0.0077  Score=47.64  Aligned_cols=59  Identities=14%  Similarity=0.014  Sum_probs=42.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+......       ...++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        27 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   99 (255)
T 1fmc_A           27 IAITFATA--G--ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGG   99 (255)
T ss_dssp             HHHHHHTT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            55555554  3  677777776532110       12467789999999999999987       899999999854

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.67  E-value=0.0037  Score=50.59  Aligned_cols=61  Identities=8%  Similarity=0.029  Sum_probs=46.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC----CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN----LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++...+  .++.+.+|+.+.....    ..++.++++|+.|+++++++++       +.|++||++|..
T Consensus        18 ia~~l~~~g~~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~   89 (254)
T 3kzv_A           18 IVDVLFSLDKD--TVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVL   89 (254)
T ss_dssp             HHHHHHHHCSS--CEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred             HHHHHHhcCCC--eEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCccc
Confidence            66777777667  7888888765432110    1457889999999999999987       679999999974

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.66  E-value=0.0087  Score=47.33  Aligned_cols=59  Identities=14%  Similarity=0.063  Sum_probs=42.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.....        ....++.++++|+.|+++++++++       +.|+|||++|..
T Consensus        18 ~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~   91 (250)
T 2cfc_A           18 IATRFLARG----DRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGIT   91 (250)
T ss_dssp             HHHHHHHTT----CEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            667777653    56777777653211        011357789999999999999987       789999999853

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.66  E-value=0.018  Score=44.12  Aligned_cols=48  Identities=17%  Similarity=0.152  Sum_probs=37.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc---CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK---CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~---~dVVIN~aGPf  136 (184)
                      ++.+|+ .  +  .++.+.+|+..          ++.+|+.|++++++++++   .|+||||+|..
T Consensus        19 ~~~~l~-~--g--~~V~~~~r~~~----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~   69 (202)
T 3d7l_A           19 VKERLE-K--K--AEVITAGRHSG----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSA   69 (202)
T ss_dssp             HHHHHT-T--T--SEEEEEESSSS----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             HHHHHH-C--C--CeEEEEecCcc----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            566666 3  4  67777766543          578999999999999987   79999999943

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.64  E-value=0.0095  Score=46.63  Aligned_cols=54  Identities=13%  Similarity=0.073  Sum_probs=42.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.. .    ..+.++++|+.|+++++++++      +.|+|||++|..
T Consensus        18 la~~l~~~--G--~~V~~~~r~~~-~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~   77 (242)
T 1uay_A           18 AALALKAR--G--YRVVVLDLRRE-G----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVG   77 (242)
T ss_dssp             HHHHHHHH--T--CEEEEEESSCC-S----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEccCcc-c----cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccccc
Confidence            66677755  3  56777777765 2    456899999999999999998      789999999854

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=95.64  E-value=0.0032  Score=51.64  Aligned_cols=82  Identities=7%  Similarity=0.091  Sum_probs=50.6

Q ss_pred             ccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC--CCCCEEEEeCCCHHHHHHHhh--
Q psy1304          49 ESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL--IDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~--~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      ..-.++||+.-|.|-   ++|----++..|++.  +  .++.+.+|+.+...+..  ..+.++.+|+.|+++++++++  
T Consensus        21 ~~m~l~~k~vlVTGa---s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   93 (260)
T 3gem_A           21 GHMTLSSAPILITGA---SQRVGLHCALRLLEH--G--HRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLL   93 (260)
T ss_dssp             ------CCCEEESST---TSHHHHHHHHHHHHT--T--CCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHH
T ss_pred             cCcCCCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHH
Confidence            344577888777762   122011144455544  3  67888888764321111  247899999999999999987  


Q ss_pred             -----cCcEEEecccccc
Q psy1304         125 -----KCRVILNCVGPYT  137 (184)
Q Consensus       125 -----~~dVVIN~aGPf~  137 (184)
                           +.|+|||+||.+.
T Consensus        94 ~~~~g~iD~lv~nAg~~~  111 (260)
T 3gem_A           94 KTQTSSLRAVVHNASEWL  111 (260)
T ss_dssp             HHHCSCCSEEEECCCCCC
T ss_pred             HHhcCCCCEEEECCCccC
Confidence                 5899999999653

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=95.63  E-value=0.0088  Score=48.66  Aligned_cols=80  Identities=14%  Similarity=0.165  Sum_probs=52.2

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-------------------ccCCCCCCEEEE
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-------------------RENLIDIPIIIA  111 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-------------------~~~~~~v~~v~v  111 (184)
                      ..++||+.-|.|-   .+|--.-++..|++.  +  .++.+.+|++...                   .....++.++++
T Consensus         9 ~~l~gk~vlVTGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (278)
T 3sx2_A            9 GPLTGKVAFITGA---ARGQGRAHAVRLAAD--G--ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQA   81 (278)
T ss_dssp             CTTTTCEEEEEST---TSHHHHHHHHHHHHT--T--CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CCCCCCEEEEECC---CChHHHHHHHHHHHC--C--CeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeC
Confidence            4577888777762   122011145555554  3  6777877752100                   001256889999


Q ss_pred             eCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304         112 DLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus       112 Dv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      |+.|+++++++++       +.|++||+||...
T Consensus        82 D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~  114 (278)
T 3sx2_A           82 DVRDRESLSAALQAGLDELGRLDIVVANAGIAP  114 (278)
T ss_dssp             CTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999988       7899999999653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=95.62  E-value=0.0015  Score=50.28  Aligned_cols=48  Identities=23%  Similarity=0.214  Sum_probs=35.9

Q ss_pred             eEEeeeecccccccC---CCCCCEEEEeCCCHHHHHHHhh---cCcEEEeccccc
Q psy1304          88 RLGLLGARDCLYREN---LIDIPIIIADLKNESSILIMAK---KCRVILNCVGPY  136 (184)
Q Consensus        88 ~iaLAGrr~~lg~~~---~~~v~~v~vDv~D~~sL~a~l~---~~dVVIN~aGPf  136 (184)
                      ++.+.+|+.......   ... .++.+|+.|++++.++++   +.|+|||++|..
T Consensus        24 ~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A           24 DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            677777765322110   122 788899999999999999   899999999964

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.61  E-value=0.0074  Score=48.86  Aligned_cols=59  Identities=17%  Similarity=0.121  Sum_probs=43.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC----CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN----LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+.    ..++.++.+|+.|+++++++++       +.|++||++|..
T Consensus        16 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~   85 (248)
T 3asu_A           16 ITRRFIQQ--G--HKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLA   85 (248)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence            66777765  3  6788888865422110    1357889999999999999987       579999999853

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=95.61  E-value=0.0084  Score=48.62  Aligned_cols=77  Identities=14%  Similarity=0.210  Sum_probs=50.1

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------C--CCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------N--LIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~--~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      |+||+.-|.|-   .+|--.-++.+|++.  +  .++.+.+|+.+...+       .  ..++.++++|+.|++++++++
T Consensus        11 l~~k~vlVTGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   83 (267)
T 1iy8_A           11 FTDRVVLITGG---GSGLGRATAVRLAAE--G--AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV   83 (267)
T ss_dssp             CTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHH
Confidence            56666666551   122011155556654  3  678888876532211       0  245778999999999999998


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|+|||++|..
T Consensus        84 ~~~~~~~g~id~lv~nAg~~  103 (267)
T 1iy8_A           84 TATTERFGRIDGFFNNAGIE  103 (267)
T ss_dssp             HHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            7       579999999854

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=95.61  E-value=0.0046  Score=49.43  Aligned_cols=79  Identities=13%  Similarity=0.054  Sum_probs=52.1

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      -.|+||+.-|.|-   .+|--.-++.+|++..    .++.+.+|+.+....       ...++.++.+|+.|++++++++
T Consensus         5 ~~~~~k~vlITGa---s~giG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   77 (253)
T 3qiv_A            5 MRFENKVGIVTGS---GGGIGQAYAEALAREG----AAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMA   77 (253)
T ss_dssp             CTTTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECC---CChHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            3466777666652   1220111555555553    678888886542211       1245789999999999999998


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|+|||++|.+
T Consensus        78 ~~~~~~~g~id~li~~Ag~~   97 (253)
T 3qiv_A           78 DRTLAEFGGIDYLVNNAAIF   97 (253)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            8       789999999963

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.57  E-value=0.0089  Score=48.50  Aligned_cols=59  Identities=14%  Similarity=0.219  Sum_probs=41.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+          ...++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        22 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~   97 (278)
T 1spx_A           22 TAVLFARE--G--AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAA   97 (278)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC--
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55666654  3  678888876532110          11356789999999999999998       899999999854

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=95.57  E-value=0.0084  Score=48.43  Aligned_cols=58  Identities=14%  Similarity=0.172  Sum_probs=42.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC---------CCCCCEEEEeCCCHHHHHHHhh------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN---------LIDIPIIIADLKNESSILIMAK------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~---------~~~v~~v~vDv~D~~sL~a~l~------~~dVVIN~aGP  135 (184)
                      ++.+|++.  +  .++.+.+|+.+...+.         ..++.++.+|+.|+++++++++      +.|+|||++|.
T Consensus        23 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid~lv~~Ag~   95 (260)
T 2z1n_A           23 SALELARN--G--ARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGADILVYSTGG   95 (260)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCCEEEECCCC
Confidence            56666655  3  6788888865322110         1267889999999999999998      69999999994

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=95.57  E-value=0.0035  Score=53.30  Aligned_cols=79  Identities=15%  Similarity=0.054  Sum_probs=54.7

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC----CCCCCEEEEeCCCHHHHHHHhhc-
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN----LIDIPIIIADLKNESSILIMAKK-  125 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v~~v~vDv~D~~sL~a~l~~-  125 (184)
                      +-|+||+.-|.|-   ++|----++..|++..    .++++.+|+++...+.    ..+...+++|+.|+++++++++. 
T Consensus        25 ~rL~gKvalVTGa---s~GIG~aiA~~la~~G----a~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   97 (273)
T 4fgs_A           25 QRLNAKIAVITGA---TSGIGLAAAKRFVAEG----ARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKV   97 (273)
T ss_dssp             CTTTTCEEEEESC---SSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             chhCCCEEEEeCc---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHH
Confidence            4588999888772   3331112455555544    7899999876432211    15677899999999999988764 


Q ss_pred             ------CcEEEeccccc
Q psy1304         126 ------CRVILNCVGPY  136 (184)
Q Consensus       126 ------~dVVIN~aGPf  136 (184)
                            .|++||+||-.
T Consensus        98 ~~~~G~iDiLVNNAG~~  114 (273)
T 4fgs_A           98 KAEAGRIDVLFVNAGGG  114 (273)
T ss_dssp             HHHHSCEEEEEECCCCC
T ss_pred             HHHcCCCCEEEECCCCC
Confidence                  69999999844

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=95.56  E-value=0.0046  Score=50.51  Aligned_cols=79  Identities=19%  Similarity=0.172  Sum_probs=52.9

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .++||+.-|.|-   .+|--.-++..|++.  +  .++.+.+|+.+...+        ...++.++++|+.|++++++++
T Consensus        17 ~l~~k~vlVTGa---s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~   89 (266)
T 4egf_A           17 RLDGKRALITGA---TKGIGADIARAFAAA--G--ARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELA   89 (266)
T ss_dssp             CCTTCEEEETTT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHH
T ss_pred             CCCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            467888777662   122011144555544  3  678888886532211        1256889999999999999888


Q ss_pred             h-------cCcEEEecccccc
Q psy1304         124 K-------KCRVILNCVGPYT  137 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf~  137 (184)
                      +       +.|++||+||...
T Consensus        90 ~~~~~~~g~id~lv~nAg~~~  110 (266)
T 4egf_A           90 RRAAEAFGGLDVLVNNAGISH  110 (266)
T ss_dssp             HHHHHHHTSCSEEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcCC
Confidence            7       7899999999653

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=95.53  E-value=0.0053  Score=48.63  Aligned_cols=59  Identities=10%  Similarity=0.086  Sum_probs=42.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+......      ...++.++.+|+.|++++.+++++       .|+|||++|..
T Consensus        22 ~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~   93 (251)
T 1zk4_A           22 IATKFVEE--G--AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA   93 (251)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            55566654  3  577788776532110      114678999999999999998875       89999999954

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.53  E-value=0.0083  Score=48.21  Aligned_cols=58  Identities=12%  Similarity=0.133  Sum_probs=41.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      ++..|++..    .++.+.+|++....        ....++.++++|+.|+++++++++       +.|+|||+||+
T Consensus        23 ~a~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~   95 (264)
T 3i4f_A           23 VTEKLLAKG----YSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGP   95 (264)
T ss_dssp             HHHHHHHTT----CEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            566666553    56777766542110        011467899999999999999987       78999999994

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=95.52  E-value=0.0044  Score=50.31  Aligned_cols=59  Identities=14%  Similarity=-0.069  Sum_probs=43.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+       ...++.++++|+.|+++++++++      +.|++||++|..
T Consensus        23 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv~nAg~~   94 (252)
T 3h7a_A           23 IAKKFAAE--G--FTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVTIFNVGAN   94 (252)
T ss_dssp             HHHHHHHT--T--CEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEEEECCCcC
Confidence            55555555  3  678888887643221       12467899999999999999998      569999999954

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.52  E-value=0.014  Score=47.00  Aligned_cols=59  Identities=12%  Similarity=-0.000  Sum_probs=43.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccc--ccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCL--YRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~l--g~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+.  ..+       ...++.++++|+.|+++++++++       +.|+|||++|..
T Consensus        18 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~   92 (258)
T 3a28_C           18 ISEKLAAD--G--FDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIA   92 (258)
T ss_dssp             HHHHHHHH--T--CEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            66677765  3  678888876543  110       12457789999999999999887       789999999954

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=95.48  E-value=0.0055  Score=48.87  Aligned_cols=59  Identities=15%  Similarity=0.165  Sum_probs=41.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CC-----------CCCCEEEEeCCCHHHHHHHhhcC--------cEEEe
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NL-----------IDIPIIIADLKNESSILIMAKKC--------RVILN  131 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~-----------~~v~~v~vDv~D~~sL~a~l~~~--------dVVIN  131 (184)
                      ++.+|++.  +  .++.+.+|+......   ..           .++.++.+|+.|+++++++++++        |+|||
T Consensus        23 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~   98 (264)
T 2pd6_A           23 VSVRLAGE--G--ATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVS   98 (264)
T ss_dssp             HHHHHHHT--T--CEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEE
T ss_pred             HHHHHHHC--C--CEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            55666654  3  577777776532110   00           45788999999999999998874        99999


Q ss_pred             ccccc
Q psy1304         132 CVGPY  136 (184)
Q Consensus       132 ~aGPf  136 (184)
                      ++|..
T Consensus        99 ~Ag~~  103 (264)
T 2pd6_A           99 CAGIT  103 (264)
T ss_dssp             CCCCC
T ss_pred             CCCcC
Confidence            99954

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=95.48  E-value=0.006  Score=49.86  Aligned_cols=77  Identities=9%  Similarity=0.171  Sum_probs=50.3

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---C-----CCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---N-----LIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---~-----~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .++||+.-|.|-   .+|--.-++.+|++.  +  .++.+.+|+.....+   .     ..++.++.+|+.|++++++++
T Consensus        23 ~l~~k~vlITGa---sggiG~~la~~L~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~   95 (302)
T 1w6u_A           23 SFQGKVAFITGG---GTGLGKGMTTLLSSL--G--AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTV   95 (302)
T ss_dssp             TTTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEECC---CchHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHH
Confidence            466777666651   111001155555554  3  678888876532210   0     246789999999999999998


Q ss_pred             hcC-------cEEEecccc
Q psy1304         124 KKC-------RVILNCVGP  135 (184)
Q Consensus       124 ~~~-------dVVIN~aGP  135 (184)
                      +++       |+|||+||.
T Consensus        96 ~~~~~~~g~id~li~~Ag~  114 (302)
T 1w6u_A           96 SELIKVAGHPNIVINNAAG  114 (302)
T ss_dssp             HHHHHHTCSCSEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            865       999999994

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.47  E-value=0.0068  Score=50.08  Aligned_cols=59  Identities=17%  Similarity=0.157  Sum_probs=44.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhhcC-------cEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAKKC-------RVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~~~-------dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+...+      ...++.++++|+.|+++++++++++       |+|||++|..
T Consensus        37 ia~~La~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~  108 (272)
T 2nwq_A           37 CARRFAEAG----WSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLA  108 (272)
T ss_dssp             HHHHHHHTT----CEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            677777653    678888886532211      0136788999999999999999875       9999999854

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=95.47  E-value=0.0066  Score=50.57  Aligned_cols=81  Identities=16%  Similarity=0.112  Sum_probs=52.9

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ..++||+.-|.|--- +||----++.+|++..    .++.+.+|++....      ...+++.++++|+.|+++++++++
T Consensus        27 ~~l~gk~~lVTGasg-~~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  101 (293)
T 3grk_A           27 GLLQGKRGLILGVAN-NRSIAWGIAKAAREAG----AELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFE  101 (293)
T ss_dssp             CTTTTCEEEEECCCS-SSSHHHHHHHHHHHTT----CEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCC-CCcHHHHHHHHHHHCC----CEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHH
Confidence            347888887777210 0331112445555543    67888887643211      011457899999999999999987


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             +.|++||+||-.
T Consensus       102 ~~~~~~g~iD~lVnnAG~~  120 (293)
T 3grk_A          102 TLEKKWGKLDFLVHAIGFS  120 (293)
T ss_dssp             HHHHHTSCCSEEEECCCCC
T ss_pred             HHHHhcCCCCEEEECCccC
Confidence                   689999999955

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=95.45  E-value=0.0077  Score=49.46  Aligned_cols=79  Identities=20%  Similarity=0.233  Sum_probs=52.0

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh---
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      .++||+.-|.|-   ++|----++.+|++.  +  .++.+.+|+.+...+    ...++.++++|+.|+++++++++   
T Consensus        24 ~l~gk~vlVTGa---s~gIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           24 KLTGRKALVTGA---TGGIGEAIARCFHAQ--G--AIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             CCTTCEEEESST---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHH
Confidence            366777777662   122001144455544  3  678888886643221    11467899999999999999987   


Q ss_pred             ----cCcEEEecccccc
Q psy1304         125 ----KCRVILNCVGPYT  137 (184)
Q Consensus       125 ----~~dVVIN~aGPf~  137 (184)
                          +.|+|||+||...
T Consensus        97 ~~~g~iD~lvnnAg~~~  113 (266)
T 3grp_A           97 REMEGIDILVNNAGITR  113 (266)
T ss_dssp             HHHTSCCEEEECCCCC-
T ss_pred             HHcCCCCEEEECCCCCC
Confidence                6899999999653

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=95.45  E-value=0.0097  Score=46.97  Aligned_cols=59  Identities=15%  Similarity=0.036  Sum_probs=43.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+...        ....++.++++|+.|++++.++++       +.|++||++|..
T Consensus        18 ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~   91 (235)
T 3l77_A           18 IARALARDG----YALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLG   91 (235)
T ss_dssp             HHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccc
Confidence            566666553    67888888653211        112567899999999999999987       689999999964

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=95.45  E-value=0.0041  Score=50.31  Aligned_cols=78  Identities=14%  Similarity=0.086  Sum_probs=50.6

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC----CCCCCEEEEeCCCHHHHHHHhh---
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN----LIDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      .++||+.-|.|-   ++|----++.+|++.  +  .++.+.+|+++...+.    ..+..++++|+.|+++++++++   
T Consensus         6 ~l~gk~~lVTGa---s~gIG~a~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            6 NLEGKVALVTGA---SRGIGKAIAELLAER--G--AKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             CCTTCEEEESSC---SSHHHHHHHHHHHHT--T--CEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHH
Confidence            356777766662   122001144455544  3  6788888765422110    1346789999999999999988   


Q ss_pred             ----cCcEEEeccccc
Q psy1304         125 ----KCRVILNCVGPY  136 (184)
Q Consensus       125 ----~~dVVIN~aGPf  136 (184)
                          +.|++||+||..
T Consensus        79 ~~~g~iD~lv~nAg~~   94 (248)
T 3op4_A           79 DEFGGVDILVNNAGIT   94 (248)
T ss_dssp             HHHCCCSEEEECCCCC
T ss_pred             HHcCCCCEEEECCCCC
Confidence                789999999964

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=95.44  E-value=0.015  Score=45.94  Aligned_cols=59  Identities=8%  Similarity=-0.010  Sum_probs=41.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CCCCCCEEEEeCCCHHHHHHHhh---cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NLIDIPIIIADLKNESSILIMAK---KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D~~sL~a~l~---~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+......   .....+++.+|+.|+++++++++   +.|+|||++|..
T Consensus        23 ~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~   87 (244)
T 3d3w_A           23 TVQALHAT--G--ARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVA   87 (244)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCccC
Confidence            45555554  3  567777776532211   12356788999999999999997   479999999954

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.42  E-value=0.0065  Score=48.98  Aligned_cols=77  Identities=18%  Similarity=0.181  Sum_probs=48.3

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhh------c
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAK------K  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~------~  125 (184)
                      ++||+.-|.|-   .+|----++.+|++..    .++.+.+|+.+...+ ...++.++++|+.|+++++++++      +
T Consensus         7 l~~k~vlVTGa---s~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~   79 (257)
T 3tl3_A            7 IRDAVAVVTGG---ASGLGLATTKRLLDAG----AQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGT   79 (257)
T ss_dssp             ---CEEEEETT---TSHHHHHHHHHHHHHT----CEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             ecCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            55666656551   1120011555555543    567777775432111 22568899999999999999987      7


Q ss_pred             CcEEEeccccc
Q psy1304         126 CRVILNCVGPY  136 (184)
Q Consensus       126 ~dVVIN~aGPf  136 (184)
                      .|++||++|..
T Consensus        80 id~lv~nAg~~   90 (257)
T 3tl3_A           80 LRIVVNCAGTG   90 (257)
T ss_dssp             EEEEEECGGGS
T ss_pred             CCEEEECCCCC
Confidence            89999999954

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=95.42  E-value=0.0064  Score=49.46  Aligned_cols=59  Identities=10%  Similarity=0.011  Sum_probs=42.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CC-CCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NL-IDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~-~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+   .. .++.++++|+.|+++++++++       +.|+|||++|..
T Consensus        23 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~   92 (260)
T 1nff_A           23 HVRAMVAE--G--AKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL   92 (260)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55566654  3  678888876543211   11 236788999999999999998       799999999954

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.39  E-value=0.0098  Score=48.78  Aligned_cols=81  Identities=6%  Similarity=0.032  Sum_probs=52.7

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc--ccc---ccCCCCCCEEEEeCCCHHHHHHHhhc-
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD--CLY---RENLIDIPIIIADLKNESSILIMAKK-  125 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~--~lg---~~~~~~v~~v~vDv~D~~sL~a~l~~-  125 (184)
                      .++||+.-|-|--- ++|----++.+|++.  +  .++.+.+|+.  +..   ....+++.++.+|+.|+++++++++. 
T Consensus        23 ~l~~k~vlVTGasg-~~GIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           23 FLAGKKILITGLLS-NKSIAYGIAKAMHRE--G--AELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             TTTTCEEEECCCCS-TTCHHHHHHHHHHHT--T--CEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCC-CCCHHHHHHHHHHHc--C--CEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHH
Confidence            47788877776110 022111245555554  3  6788888875  110   01225688999999999999999875 


Q ss_pred             ------CcEEEecccccc
Q psy1304         126 ------CRVILNCVGPYT  137 (184)
Q Consensus       126 ------~dVVIN~aGPf~  137 (184)
                            .|+|||+||...
T Consensus        98 ~~~~g~id~li~nAg~~~  115 (280)
T 3nrc_A           98 GKVWDGLDAIVHSIAFAP  115 (280)
T ss_dssp             HHHCSSCCEEEECCCCCC
T ss_pred             HHHcCCCCEEEECCccCC
Confidence                  599999999653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.38  E-value=0.013  Score=47.65  Aligned_cols=55  Identities=13%  Similarity=0.068  Sum_probs=41.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++..|++..    .++.+.+|+.+..    ..+.++++|+.|++++++++++       .|+|||++|..
T Consensus        37 ia~~l~~~G----~~V~~~~r~~~~~----~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~   98 (253)
T 2nm0_A           37 IARAFADAG----DKVAITYRSGEPP----EGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVT   98 (253)
T ss_dssp             HHHHHHHTT----CEEEEEESSSCCC----TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCC
T ss_pred             HHHHHHHCC----CEEEEEeCChHhh----ccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            555566543    6777877765432    3478999999999999998875       59999999964

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=95.38  E-value=0.013  Score=47.28  Aligned_cols=59  Identities=15%  Similarity=0.107  Sum_probs=42.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccc-cccC--------CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCL-YREN--------LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~l-g~~~--------~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+. ..+.        ..++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        20 ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~   94 (260)
T 1x1t_A           20 IATALAAQG----ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ   94 (260)
T ss_dssp             HHHHHHHTT----CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHHcC----CEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            566666653    577787776543 1100        2357788899999999999987       689999999854

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.36  E-value=0.02  Score=46.84  Aligned_cols=32  Identities=13%  Similarity=0.183  Sum_probs=28.6

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304         104 IDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      .++.++++|+.|+++++++++       +.|++||++|.
T Consensus        76 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           76 RRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            467889999999999999987       68999999994

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=95.35  E-value=0.012  Score=48.28  Aligned_cols=77  Identities=12%  Similarity=0.053  Sum_probs=50.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      ++||+.-|.|-   .+|---.++.+|++.  +  .++.+.+|+.+...+       ...++.++.+|+.|+++++++++ 
T Consensus        20 l~~k~vlVTGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~   92 (277)
T 2rhc_B           20 QDSEVALVTGA---TSGIGLEIARRLGKE--G--LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA   92 (277)
T ss_dssp             TTSCEEEEETC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            66777666651   112011155556654  3  678888876532110       12457789999999999999887 


Q ss_pred             ------cCcEEEeccccc
Q psy1304         125 ------KCRVILNCVGPY  136 (184)
Q Consensus       125 ------~~dVVIN~aGPf  136 (184)
                            +.|+|||++|..
T Consensus        93 ~~~~~g~iD~lv~~Ag~~  110 (277)
T 2rhc_B           93 VVERYGPVDVLVNNAGRP  110 (277)
T ss_dssp             HHHHTCSCSEEEECCCCC
T ss_pred             HHHHhCCCCEEEECCCCC
Confidence                  689999999854

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.34  E-value=0.013  Score=46.95  Aligned_cols=59  Identities=19%  Similarity=0.094  Sum_probs=42.1

Q ss_pred             hhhhhhhCCCCCceeEEeeee-ccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGA-RDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGr-r~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+| +.+...+       ...++.++++|+.|+++++++++       +.|+|||++|..
T Consensus        20 ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~   93 (246)
T 2uvd_A           20 IAIDLAKQG----ANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT   93 (246)
T ss_dssp             HHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            566666653    56777777 4322110       12457789999999999999987       689999999954

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=95.33  E-value=0.01  Score=46.95  Aligned_cols=59  Identities=8%  Similarity=0.046  Sum_probs=44.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhhcC----cEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAKKC----RVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~~~----dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+...+    ...++.++.+|+.|++++++++++.    |+|||++|..
T Consensus        17 ~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag~~   83 (230)
T 3guy_A           17 LAKLYDAEG----KATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSG   83 (230)
T ss_dssp             HHHHHHHTT----CCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCCcC
Confidence            566666654    678888887643221    1256889999999999999999886    8999999954

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=95.33  E-value=0.005  Score=49.94  Aligned_cols=77  Identities=21%  Similarity=0.208  Sum_probs=51.0

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .++||+.-|.|--   +|----++.+|++.  +  .++.+.+|+.+....       ...++.++.+|+.|++++.++++
T Consensus        26 ~l~~k~vlITGas---~gIG~~la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   98 (262)
T 3rkr_A           26 SLSGQVAVVTGAS---RGIGAAIARKLGSL--G--ARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFAT   98 (262)
T ss_dssp             TTTTCEEEESSTT---SHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEECCC---ChHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHH
Confidence            4677777776621   12001144555544  4  678888886543211       12467899999999999999887


Q ss_pred             c-------CcEEEecccc
Q psy1304         125 K-------CRVILNCVGP  135 (184)
Q Consensus       125 ~-------~dVVIN~aGP  135 (184)
                      .       .|+|||++|.
T Consensus        99 ~~~~~~g~id~lv~~Ag~  116 (262)
T 3rkr_A           99 GVLAAHGRCDVLVNNAGV  116 (262)
T ss_dssp             HHHHHHSCCSEEEECCCC
T ss_pred             HHHHhcCCCCEEEECCCc
Confidence            5       7999999996

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=95.32  E-value=0.012  Score=48.07  Aligned_cols=79  Identities=16%  Similarity=0.104  Sum_probs=50.6

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHH
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      ..++||+.-|.|-   .+|----++.+|++.  +  .++.+.+|+.+...+        ...++.++.+|+.|+++++++
T Consensus        17 ~~l~~k~~lVTGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   89 (267)
T 1vl8_A           17 FDLRGRVALVTGG---SRGLGFGIAQGLAEA--G--CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKL   89 (267)
T ss_dssp             CCCTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            3456666666551   112001155556554  3  678888876532110        124567889999999999998


Q ss_pred             hh-------cCcEEEeccccc
Q psy1304         123 AK-------KCRVILNCVGPY  136 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf  136 (184)
                      ++       +.|+|||++|..
T Consensus        90 ~~~~~~~~g~iD~lvnnAg~~  110 (267)
T 1vl8_A           90 LEAVKEKFGKLDTVVNAAGIN  110 (267)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCcC
Confidence            87       689999999954

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.32  E-value=0.0039  Score=51.42  Aligned_cols=78  Identities=21%  Similarity=0.184  Sum_probs=53.3

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+       ...++.++++|+.|+++++++++
T Consensus        23 ~l~gk~~lVTGa---s~gIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~   95 (271)
T 4ibo_A           23 DLGGRTALVTGS---SRGLGRAMAEGLAVA--G--ARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFA   95 (271)
T ss_dssp             CCTTCEEEETTC---SSHHHHHHHHHHHHT--T--CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            477888888772   222111245555554  3  678888886542211       12467889999999999999988


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             +.|+|||+||..
T Consensus        96 ~~~~~~g~iD~lv~nAg~~  114 (271)
T 4ibo_A           96 RLDEQGIDVDILVNNAGIQ  114 (271)
T ss_dssp             HHHHHTCCCCEEEECCCCC
T ss_pred             HHHHHCCCCCEEEECCCCC
Confidence                   689999999964

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=95.29  E-value=0.013  Score=47.12  Aligned_cols=59  Identities=10%  Similarity=0.117  Sum_probs=42.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+....       ...++.++++|+.|+++++++++       +.|+|||++|..
T Consensus        23 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~   95 (247)
T 2jah_A           23 TARALAAE--G--AAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIM   95 (247)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55566655  3  678888876532111       12467889999999999998887       689999999954

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=95.28  E-value=0.0041  Score=53.75  Aligned_cols=54  Identities=11%  Similarity=0.325  Sum_probs=38.6

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccc-------------hHHHHHHHHcCCCEeeCC
Q psy1304         104 IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYG-------------EAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g-------------~~VaeACieAGthYVDlt  158 (184)
                      .++.++.+|+.|++++. .+.++|+||||+|+.....             ..++++|.+.+.++|-++
T Consensus       130 ~~v~~v~~Dl~d~~~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~S  196 (427)
T 4f6c_A          130 SNIEVIVGDFECMDDVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVS  196 (427)
T ss_dssp             TTEEEEEECC---CCCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CceEEEeCCCCCcccCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEEC
Confidence            57889999999988888 8889999999999764211             578999998555555443

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=95.27  E-value=0.0093  Score=48.32  Aligned_cols=77  Identities=17%  Similarity=0.228  Sum_probs=48.9

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      ++||+.-|.|-   .+|--.-++.+|++..    .++.+.+|+.+....       ...++.++.+|+.|++++.++++ 
T Consensus         5 l~~k~vlVTGa---s~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (262)
T 1zem_A            5 FNGKVCLVTGA---GGNIGLATALRLAEEG----TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS   77 (262)
T ss_dssp             TTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCC---CcHHHHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            55666655551   1220111555566543    678788776532110       12357789999999999988887 


Q ss_pred             ------cCcEEEeccccc
Q psy1304         125 ------KCRVILNCVGPY  136 (184)
Q Consensus       125 ------~~dVVIN~aGPf  136 (184)
                            +.|+|||++|..
T Consensus        78 ~~~~~g~id~lv~nAg~~   95 (262)
T 1zem_A           78 VVRDFGKIDFLFNNAGYQ   95 (262)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHhCCCCEEEECCCCC
Confidence                  689999999843

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.27  E-value=0.0076  Score=48.47  Aligned_cols=58  Identities=14%  Similarity=0.100  Sum_probs=42.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+   .. .+.++.+|+.|++++++++++       .|+|||++|..
T Consensus        21 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~   88 (245)
T 1uls_A           21 TLELFAKE--G--ARLVACDIEEGPLREAAEAV-GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGIT   88 (245)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHTT-TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHc-CCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            56666654  3  678888886543221   11 277899999999999998875       79999999954

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.26  E-value=0.0086  Score=47.13  Aligned_cols=59  Identities=14%  Similarity=0.142  Sum_probs=42.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+......   ...++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        21 ~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~   89 (234)
T 2ehd_A           21 TARLLHAKG----YRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVG   89 (234)
T ss_dssp             HHHHHHHTT----CEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            667777653    567777776532211   12368899999999999998886       679999999953

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.25  E-value=0.015  Score=47.67  Aligned_cols=79  Identities=11%  Similarity=0.090  Sum_probs=50.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      ++||+.-|.|--. ++|--..++.+|++.  +  .++.+.+|+.....      ...+.+.++.+|+.|+++++++++  
T Consensus        19 l~~k~vlVTGas~-~~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   93 (285)
T 2p91_A           19 LEGKRALITGVAN-ERSIAYGIAKSFHRE--G--AQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFL   93 (285)
T ss_dssp             TTTCEEEECCCSS-TTSHHHHHHHHHHHT--T--CEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCC-CCcHHHHHHHHHHHc--C--CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHH
Confidence            6777777766210 012011145555554  4  67888887653100      011347899999999999999887  


Q ss_pred             -----cCcEEEeccccc
Q psy1304         125 -----KCRVILNCVGPY  136 (184)
Q Consensus       125 -----~~dVVIN~aGPf  136 (184)
                           +.|+|||+||..
T Consensus        94 ~~~~g~iD~lv~~Ag~~  110 (285)
T 2p91_A           94 EENWGSLDIIVHSIAYA  110 (285)
T ss_dssp             HHHTSCCCEEEECCCCC
T ss_pred             HHHcCCCCEEEECCCCC
Confidence                 579999999854

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.25  E-value=0.0069  Score=49.56  Aligned_cols=59  Identities=17%  Similarity=0.236  Sum_probs=42.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCC---CCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLI---DIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~---~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+       ...   ++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        22 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~   97 (280)
T 1xkq_A           22 TAILFAQE--G--ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAA   97 (280)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            55666654  3  678888876532211       012   57789999999999999887       589999999954

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=95.24  E-value=0.008  Score=48.72  Aligned_cols=59  Identities=12%  Similarity=0.118  Sum_probs=43.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+....          ...++.++.+|+.|+++++++++       +.|++||+||.+
T Consensus        23 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~   98 (250)
T 3nyw_A           23 IAAGLATD--G--YRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMF   98 (250)
T ss_dssp             HHHHHHHH--T--CEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence            55566654  3  678888887542211          11567899999999999999887       579999999965

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.23  E-value=0.012  Score=46.88  Aligned_cols=59  Identities=10%  Similarity=0.008  Sum_probs=42.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.....+        ...++.++++|+.|++++++++++       .|+|||++|..
T Consensus        30 ~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~  103 (265)
T 1h5q_A           30 FTRAVAAA--G--ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVS  103 (265)
T ss_dssp             HHHHHHHT--T--EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCC
T ss_pred             HHHHHHHC--C--CeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence            56666654  3  678888875432110        124678899999999999988875       79999999964

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=95.23  E-value=0.014  Score=48.81  Aligned_cols=78  Identities=12%  Similarity=0.090  Sum_probs=52.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .++||+.-|.|-   ++|--.-++..|++.  +  .++.+.+|+.+...+        ...++.++++|+.|++++++++
T Consensus        38 ~l~~k~vlVTGa---s~GIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~  110 (293)
T 3rih_A           38 DLSARSVLVTGG---TKGIGRGIATVFARA--G--ANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAA  110 (293)
T ss_dssp             CCTTCEEEETTT---TSHHHHHHHHHHHHT--T--CEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHH
Confidence            467888777762   222111144455544  3  678888887643211        1146788999999999999888


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|+|||+||.+
T Consensus       111 ~~~~~~~g~iD~lvnnAg~~  130 (293)
T 3rih_A          111 RTVVDAFGALDVVCANAGIF  130 (293)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            7       469999999965

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=95.22  E-value=0.01  Score=48.80  Aligned_cols=81  Identities=17%  Similarity=0.129  Sum_probs=52.5

Q ss_pred             ccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc-ccc-------cCCCCCCEEEEeCCCHHHHH
Q psy1304          49 ESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC-LYR-------ENLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~-lg~-------~~~~~v~~v~vDv~D~~sL~  120 (184)
                      ....++||+.-|.|-   ++|--.-++..|++.  +  .++.+..++.. ...       ....++.++++|+.|+++++
T Consensus        25 ~~~~l~gk~~lVTGa---s~GIG~aia~~la~~--G--~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~   97 (271)
T 3v2g_A           25 TSISLAGKTAFVTGG---SRGIGAAIAKRLALE--G--AAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIE   97 (271)
T ss_dssp             TTTCCTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cccCCCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            344578888888772   222111245555554  3  67777755431 110       01256779999999999999


Q ss_pred             HHhh-------cCcEEEeccccc
Q psy1304         121 IMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       121 a~l~-------~~dVVIN~aGPf  136 (184)
                      ++++       +.|++||+||..
T Consensus        98 ~~~~~~~~~~g~iD~lvnnAg~~  120 (271)
T 3v2g_A           98 QAIRETVEALGGLDILVNSAGIW  120 (271)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHcCCCcEEEECCCCC
Confidence            9988       789999999854

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=95.20  E-value=0.019  Score=46.12  Aligned_cols=59  Identities=12%  Similarity=0.152  Sum_probs=42.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecc-ccccc----CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARD-CLYRE----NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~-~lg~~----~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+. +...+    ...++.++++|+.|+++++++++       +.|+|||++|..
T Consensus        23 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~   93 (249)
T 2ew8_A           23 IAERFAVE--G--ADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY   93 (249)
T ss_dssp             HHHHHHHT--T--CEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55556654  3  6788888765 32111    12467889999999999998875       689999999954

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=95.20  E-value=0.014  Score=47.51  Aligned_cols=77  Identities=18%  Similarity=0.206  Sum_probs=49.6

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      ++||+.-|.|-   .+|--..++.+|++.  +  .++.+.+|+......       ...++.++.+|+.|+++++++++ 
T Consensus        29 l~~k~vlITGa---sggIG~~la~~L~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~  101 (272)
T 1yb1_A           29 VTGEIVLITGA---GHGIGRLTAYEFAKL--K--SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK  101 (272)
T ss_dssp             CTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECC---CchHHHHHHHHHHHC--C--CEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHH
Confidence            56666666551   111001155555554  3  677777776532110       12467899999999999998887 


Q ss_pred             ------cCcEEEeccccc
Q psy1304         125 ------KCRVILNCVGPY  136 (184)
Q Consensus       125 ------~~dVVIN~aGPf  136 (184)
                            +.|+|||++|..
T Consensus       102 ~~~~~g~iD~li~~Ag~~  119 (272)
T 1yb1_A          102 VKAEIGDVSILVNNAGVV  119 (272)
T ss_dssp             HHHHTCCCSEEEECCCCC
T ss_pred             HHHHCCCCcEEEECCCcC
Confidence                  689999999854

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=95.20  E-value=0.0074  Score=50.10  Aligned_cols=80  Identities=13%  Similarity=0.155  Sum_probs=53.0

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc--------ccCCCCCCEEEEeCCCHHHHHH
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY--------RENLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg--------~~~~~~v~~v~vDv~D~~sL~a  121 (184)
                      +..++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|++...        .....++.++++|+.|++++++
T Consensus        42 ~~~l~gk~vlVTGa---s~GIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  114 (291)
T 3ijr_A           42 SEKLKGKNVLITGG---DSGIGRAVSIAFAKE--G--ANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKD  114 (291)
T ss_dssp             CSTTTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHH
T ss_pred             ccCCCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            34578888888772   222111244444444  3  6788888765311        1112467889999999999999


Q ss_pred             Hhh-------cCcEEEeccccc
Q psy1304         122 MAK-------KCRVILNCVGPY  136 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGPf  136 (184)
                      +++       +.|++||+||..
T Consensus       115 ~~~~~~~~~g~iD~lvnnAg~~  136 (291)
T 3ijr_A          115 IVQETVRQLGSLNILVNNVAQQ  136 (291)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCc
Confidence            887       689999999854

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=95.18  E-value=0.02  Score=45.04  Aligned_cols=58  Identities=7%  Similarity=-0.023  Sum_probs=41.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CCCCCCEEEEeCCCHHHHHHHhhc---CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NLIDIPIIIADLKNESSILIMAKK---CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D~~sL~a~l~~---~dVVIN~aGP  135 (184)
                      ++.+|++.  +  .++.+.+|+.....+   ...+.+++.+|+.|++++++++++   .|+|||++|.
T Consensus        23 ~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~   86 (244)
T 1cyd_A           23 TVKALHAS--G--AKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAAL   86 (244)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCcc
Confidence            55666654  3  567777776532111   124577889999999999999974   6999999994

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=95.17  E-value=0.0093  Score=49.23  Aligned_cols=59  Identities=15%  Similarity=0.110  Sum_probs=43.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+.+....       ...++.++.+|+.|+++++++++       +.|++||+||..
T Consensus        20 ia~~la~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~   92 (264)
T 3tfo_A           20 IARELGVA--G--AKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVM   92 (264)
T ss_dssp             HHHHHHHT--T--CEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55566655  3  678888887542211       12457788999999999999887       689999999965

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.17  E-value=0.013  Score=47.12  Aligned_cols=85  Identities=9%  Similarity=-0.131  Sum_probs=57.8

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+. +|-|+-                ++.+|.+..    -++....|+...... ...+++++++|+.|.+     +++
T Consensus        10 VtGa-G~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~   63 (286)
T 3ius_A           10 SFGH-GYTARV----------------LSRALAPQG----WRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDG   63 (286)
T ss_dssp             EETC-CHHHHH----------------HHHHHGGGT----CEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTT
T ss_pred             EECC-cHHHHH----------------HHHHHHHCC----CEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCC
Confidence            3445 888877                777887653    455555565543211 1156889999999844     789


Q ss_pred             CcEEEecccccccc---chHHHHHHHH--cCCC-EeeC
Q psy1304         126 CRVILNCVGPYTWY---GEAVVKACIE--AKTH-HVDI  157 (184)
Q Consensus       126 ~dVVIN~aGPf~~~---g~~VaeACie--AGth-YVDl  157 (184)
                      +|+||||+|+....   -..++++|.+  .|+. +|-+
T Consensus        64 ~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~  101 (286)
T 3ius_A           64 VTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYL  101 (286)
T ss_dssp             CCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEE
T ss_pred             CCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEe
Confidence            99999999987543   2678899998  5654 5543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=95.16  E-value=0.0084  Score=48.47  Aligned_cols=59  Identities=14%  Similarity=-0.032  Sum_probs=42.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---C-CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---N-LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~-~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+   . ..++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        21 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~   90 (254)
T 1hdc_A           21 AARQAVAA--G--ARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIS   90 (254)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55556654  3  678888886543211   1 1346788999999999999988       799999999954

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.15  E-value=0.0071  Score=48.84  Aligned_cols=57  Identities=16%  Similarity=0.112  Sum_probs=41.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC---CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN---LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~---~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+. .+.   ... .++++|+.|+++++++++       +.|+|||++|..
T Consensus        22 ia~~l~~~G----~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~   88 (256)
T 2d1y_A           22 IAQAFAREG----ALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIA   88 (256)
T ss_dssp             HHHHHHHTT----CEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            556666553    577788776543 211   123 788999999999998887       579999999954

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.14  E-value=0.011  Score=46.71  Aligned_cols=63  Identities=14%  Similarity=0.015  Sum_probs=43.6

Q ss_pred             hhhhhhhCCC---CCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPT---SNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~---~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++...   +-..++.+.+|+......       ...++.++.+|+.|++++.++++       +.|+|||++|..
T Consensus        18 la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~   97 (244)
T 2bd0_A           18 IALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG   97 (244)
T ss_dssp             HHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred             HHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcC
Confidence            6677775432   211277787776432110       12457889999999999999987       699999999954

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=95.14  E-value=0.0093  Score=48.54  Aligned_cols=77  Identities=17%  Similarity=0.076  Sum_probs=48.7

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ++||+.-|.|-   .++----++.+|++.  +  .+|.+.+|+.....+         ....+.++.+|+.|++++++++
T Consensus        30 l~~k~vlVTGa---sggIG~~la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~  102 (279)
T 1xg5_A           30 WRDRLALVTGA---SGGIGAAVARALVQQ--G--LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF  102 (279)
T ss_dssp             GTTCEEEEEST---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEECC---CchHHHHHHHHHHHC--C--CEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHH
Confidence            56777666651   111001145555554  4  678888776432110         0134678899999999999988


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|+|||++|..
T Consensus       103 ~~~~~~~g~iD~vi~~Ag~~  122 (279)
T 1xg5_A          103 SAIRSQHSGVDICINNAGLA  122 (279)
T ss_dssp             HHHHHHHCCCSEEEECCCCC
T ss_pred             HHHHHhCCCCCEEEECCCCC
Confidence            7       799999999943

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=95.10  E-value=0.013  Score=47.24  Aligned_cols=77  Identities=16%  Similarity=0.110  Sum_probs=49.4

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHh--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMA--  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l--  123 (184)
                      ++||+.-|.|-   ++|--..++.+|++.  +  .++.+.+|+.+...+       ...++.++++|+.|++++++++  
T Consensus         7 l~~k~vlVTGa---s~giG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (260)
T 2ae2_A            7 LEGCTALVTGG---SRGIGYGIVEELASL--G--ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT   79 (260)
T ss_dssp             CTTCEEEEESC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            55666666551   122011155566654  3  678888876532211       1135778999999999999988  


Q ss_pred             ------hcCcEEEeccccc
Q psy1304         124 ------KKCRVILNCVGPY  136 (184)
Q Consensus       124 ------~~~dVVIN~aGPf  136 (184)
                            .+.|+|||++|..
T Consensus        80 ~~~~~~g~id~lv~~Ag~~   98 (260)
T 2ae2_A           80 VANHFHGKLNILVNNAGIV   98 (260)
T ss_dssp             HHHHTTTCCCEEEECCCCC
T ss_pred             HHHHcCCCCCEEEECCCCC
Confidence                  4689999999954

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.09  E-value=0.0081  Score=50.11  Aligned_cols=77  Identities=17%  Similarity=0.292  Sum_probs=49.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCC---CCCEEEEeCCCHHHHHHH
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLI---DIPIIIADLKNESSILIM  122 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~---~v~~v~vDv~D~~sL~a~  122 (184)
                      ++||+.-|.|-   .+|--.-++..|++.  +  .++.+.+|+.+...+       ...   ++.++.+|+.|+++++++
T Consensus        24 l~~k~vlVTGa---s~gIG~aia~~L~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~   96 (297)
T 1xhl_A           24 FSGKSVIITGS---SNGIGRSAAVIFAKE--G--AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI   96 (297)
T ss_dssp             CTTCEEEETTC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHH
Confidence            56666666551   112001155555554  4  678888886532211       012   577899999999999998


Q ss_pred             hh-------cCcEEEeccccc
Q psy1304         123 AK-------KCRVILNCVGPY  136 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf  136 (184)
                      ++       +.|+|||++|..
T Consensus        97 ~~~~~~~~g~iD~lvnnAG~~  117 (297)
T 1xhl_A           97 INTTLAKFGKIDILVNNAGAN  117 (297)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHhcCCCCEEEECCCcC
Confidence            87       689999999954

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=95.09  E-value=0.014  Score=47.72  Aligned_cols=77  Identities=19%  Similarity=0.231  Sum_probs=49.9

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------CC----CCCCEEEEeCCCHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------NL----IDIPIIIADLKNESSILI  121 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~----~~v~~v~vDv~D~~sL~a  121 (184)
                      .|+||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+      ..    .++.++++|+.|++++++
T Consensus         8 ~l~~k~vlVTGa---s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~   80 (281)
T 3svt_A            8 SFQDRTYLVTGG---GSGIGKGVAAGLVAA--G--ASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETAR   80 (281)
T ss_dssp             CCTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHH
T ss_pred             CcCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHH
Confidence            456777666651   122001145555554  3  678888886532111      01    257889999999999999


Q ss_pred             Hhh-------cCcEEEecccc
Q psy1304         122 MAK-------KCRVILNCVGP  135 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGP  135 (184)
                      +++       +.|++||+||.
T Consensus        81 ~~~~~~~~~g~id~lv~nAg~  101 (281)
T 3svt_A           81 AVDAVTAWHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCc
Confidence            987       46999999995

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=95.06  E-value=0.0085  Score=48.31  Aligned_cols=59  Identities=8%  Similarity=0.070  Sum_probs=42.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC----CCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN----LIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+.+...+.    ..++.++++|+.|++++++++++       .|+|||++|..
T Consensus        22 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~   91 (253)
T 1hxh_A           22 VVKLLLGE--G--AKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGIL   91 (253)
T ss_dssp             HHHHHHHT--T--CEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55566654  3  6788887765422110    14577899999999999998875       59999999965

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=95.06  E-value=0.0055  Score=54.46  Aligned_cols=53  Identities=11%  Similarity=0.322  Sum_probs=40.3

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccc-------------hHHHHHHHHcCCCEeeC
Q psy1304         104 IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYG-------------EAVVKACIEAKTHHVDI  157 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g-------------~~VaeACieAGthYVDl  157 (184)
                      .++.++.+|+.|++++. ...++|+||||+|+.....             ..++++|.+.+.++|-+
T Consensus       211 ~~v~~v~~Dl~d~~~l~-~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~i  276 (508)
T 4f6l_B          211 SNIEVIVGDFECMDDVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYV  276 (508)
T ss_dssp             TTEEEEEEBTTBCSSCC-CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             CceEEEecCCcccccCC-CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEe
Confidence            67899999999988888 8889999999999753111             67899999866555543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=95.06  E-value=0.0097  Score=48.26  Aligned_cols=79  Identities=13%  Similarity=0.004  Sum_probs=52.2

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+       ...++.++++|+.|+++++++++
T Consensus         9 ~l~~k~vlVTGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   81 (256)
T 3gaf_A            9 HLNDAVAIVTGA---AAGIGRAIAGTFAKA--G--ASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIK   81 (256)
T ss_dssp             CCTTCEEEECSC---SSHHHHHHHHHHHHH--T--CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            466777666652   122011145555554  3  678888886542211       12567889999999999999987


Q ss_pred             -------cCcEEEecccccc
Q psy1304         125 -------KCRVILNCVGPYT  137 (184)
Q Consensus       125 -------~~dVVIN~aGPf~  137 (184)
                             +.|++||+||...
T Consensus        82 ~~~~~~g~id~lv~nAg~~~  101 (256)
T 3gaf_A           82 AALDQFGKITVLVNNAGGGG  101 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHcCCCCEEEECCCCCC
Confidence                   6899999999643

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.06  E-value=0.01  Score=47.51  Aligned_cols=63  Identities=19%  Similarity=0.098  Sum_probs=44.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhh---------cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAK---------KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~---------~~dVVIN~aGPf~  137 (184)
                      ++.+|++.... ..+|.+.+|+......      ...++.++.+|+.|+++++++++         +.|+|||++|...
T Consensus        37 la~~L~~~G~~-~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~  114 (267)
T 1sny_A           37 LVKALLNLPQP-PQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAP  114 (267)
T ss_dssp             HHHHHHTSSSC-CSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCC
T ss_pred             HHHHHHhcCCC-CcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCC
Confidence            55666655421 1477788776542110      12468899999999999999987         7999999999543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=95.05  E-value=0.009  Score=47.53  Aligned_cols=59  Identities=8%  Similarity=0.022  Sum_probs=43.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+       ...++.++.+|+.|+++++++++.       .|+|||++|..
T Consensus        21 ~a~~l~~~--G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~   93 (247)
T 3lyl_A           21 VAHALASK--G--ATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGIT   93 (247)
T ss_dssp             HHHHHHHT--T--CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            56666655  3  678888876532211       124678999999999999998874       69999999965

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=95.05  E-value=0.011  Score=48.33  Aligned_cols=77  Identities=17%  Similarity=0.278  Sum_probs=49.9

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---CCCCCCEEEEeCCCHHHHHHHhh-----
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---NLIDIPIIIADLKNESSILIMAK-----  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D~~sL~a~l~-----  124 (184)
                      ++||+.-|.|-   ++|----++.+|++.  +  .++.+.+|+.+...+   ...++.++++|+.|+++++++++     
T Consensus         7 l~~k~vlVTGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            7 YAGKVVVVTGG---GRGIGAGIVRAFVNS--G--ARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             TTTCEEEEETC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            56666666551   122011155555554  3  678888876542211   12347789999999999999887     


Q ss_pred             --cCcEEEeccccc
Q psy1304         125 --KCRVILNCVGPY  136 (184)
Q Consensus       125 --~~dVVIN~aGPf  136 (184)
                        +.|+|||++|..
T Consensus        80 ~g~iD~lv~nAg~~   93 (270)
T 1yde_A           80 FGRLDCVVNNAGHH   93 (270)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence              689999999854

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.04  E-value=0.018  Score=45.39  Aligned_cols=59  Identities=15%  Similarity=0.147  Sum_probs=38.8

Q ss_pred             hhhhhhhCCCCCceeEEee-eecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLL-GARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLA-Grr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+. .|+.....       ....++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        21 ~a~~l~~~G----~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   94 (247)
T 2hq1_A           21 IAWKLGNMG----ANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT   94 (247)
T ss_dssp             HHHHHHHTT----CEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---
T ss_pred             HHHHHHHCC----CEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            566666553    566666 34332111       012467889999999999999887       789999999965

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=95.04  E-value=0.0087  Score=48.05  Aligned_cols=59  Identities=15%  Similarity=0.217  Sum_probs=42.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC----CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN----LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+.    ..++.++.+|+.|+++++++++       +.|++||+||..
T Consensus        19 ~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~   88 (235)
T 3l6e_A           19 LTIGLVER--G--HQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTG   88 (235)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCC
Confidence            55666655  3  6788888876432110    0247889999999999999887       469999999954

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.03  E-value=0.017  Score=46.51  Aligned_cols=76  Identities=4%  Similarity=0.009  Sum_probs=49.0

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      ++||+.-|.|-   .+|--..++.+|++.  +  .++.+.+|+.+...+       ...++.++.+|+.|+++++++++ 
T Consensus        12 l~~k~vlVTGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (260)
T 2zat_A           12 LENKVALVTAS---TDGIGLAIARRLAQD--G--AHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAM   84 (260)
T ss_dssp             TTTCEEEESSC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            55666655541   111011155666654  3  678888876532110       12457788999999999999887 


Q ss_pred             ------cCcEEEecccc
Q psy1304         125 ------KCRVILNCVGP  135 (184)
Q Consensus       125 ------~~dVVIN~aGP  135 (184)
                            +.|+|||++|.
T Consensus        85 ~~~~~g~iD~lv~~Ag~  101 (260)
T 2zat_A           85 AVNLHGGVDILVSNAAV  101 (260)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence                  79999999984

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=95.03  E-value=0.017  Score=47.19  Aligned_cols=79  Identities=14%  Similarity=0.150  Sum_probs=51.2

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc-------------c------ccCCCCCCEEEEe
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL-------------Y------RENLIDIPIIIAD  112 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l-------------g------~~~~~~v~~v~vD  112 (184)
                      .++||+.-|.|-   .+|--.-++.+|++.  +  .++.+.+|++..             .      .....++.++++|
T Consensus         7 ~l~~k~~lVTGa---s~gIG~a~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   79 (281)
T 3s55_A            7 DFEGKTALITGG---ARGMGRSHAVALAEA--G--ADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVD   79 (281)
T ss_dssp             TTTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             ccCCCEEEEeCC---CchHHHHHHHHHHHC--C--CeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCC
Confidence            467777777661   122001144555544  3  678888885211             0      0112467889999


Q ss_pred             CCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304         113 LKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus       113 v~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      +.|+++++++++       +.|++||+||...
T Consensus        80 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~  111 (281)
T 3s55_A           80 VKDRAALESFVAEAEDTLGGIDIAITNAGIST  111 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            999999999987       6899999999653

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.02  E-value=0.045  Score=45.71  Aligned_cols=74  Identities=16%  Similarity=0.177  Sum_probs=51.6

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh-------
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK-------  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~-------  124 (184)
                      .++||+.-|.|-   ++|----++..|++..    .++.+.+|++..+   ..+.-++++|+.|+++++++++       
T Consensus         8 ~L~GK~alVTGa---s~GIG~aia~~la~~G----a~V~~~~r~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   77 (261)
T 4h15_A            8 NLRGKRALITAG---TKGAGAATVSLFLELG----AQVLTTARARPEG---LPEELFVEADLTTKEGCAIVAEATRQRLG   77 (261)
T ss_dssp             CCTTCEEEESCC---SSHHHHHHHHHHHHTT----CEEEEEESSCCTT---SCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred             CCCCCEEEEecc---CcHHHHHHHHHHHHcC----CEEEEEECCchhC---CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            478998888772   2331111344444444    7899998876532   3456689999999999998876       


Q ss_pred             cCcEEEecccc
Q psy1304         125 KCRVILNCVGP  135 (184)
Q Consensus       125 ~~dVVIN~aGP  135 (184)
                      +.|++||++|-
T Consensus        78 ~iDilVnnAG~   88 (261)
T 4h15_A           78 GVDVIVHMLGG   88 (261)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            47999999984

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.02  E-value=0.013  Score=47.39  Aligned_cols=58  Identities=10%  Similarity=0.034  Sum_probs=41.8

Q ss_pred             hhhhhhhCCCCCceeEEeeee-cccccccC--------CCCCCEEEEeCCCH----HHHHHHhh-------cCcEEEecc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGA-RDCLYREN--------LIDIPIIIADLKNE----SSILIMAK-------KCRVILNCV  133 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGr-r~~lg~~~--------~~~v~~v~vDv~D~----~sL~a~l~-------~~dVVIN~a  133 (184)
                      ++.+|++.  +  .++.+.+| +.+...+.        ..++.++++|+.|+    ++++++++       +.|+|||+|
T Consensus        27 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nA  102 (276)
T 1mxh_A           27 IAVRLHQQ--G--FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNA  102 (276)
T ss_dssp             HHHHHHHT--T--CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             HHHHHHHC--C--CEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            55666655  3  67888888 54321100        24578899999999    99998887       689999999


Q ss_pred             cc
Q psy1304         134 GP  135 (184)
Q Consensus       134 GP  135 (184)
                      |.
T Consensus       103 g~  104 (276)
T 1mxh_A          103 SA  104 (276)
T ss_dssp             CC
T ss_pred             CC
Confidence            94

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=95.02  E-value=0.013  Score=48.23  Aligned_cols=78  Identities=13%  Similarity=-0.008  Sum_probs=49.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      .+||+.-|.|-   .+|----++..|++.  +  .++.+.+|+.+...+       ...++.++++|+.|+++++++++ 
T Consensus        22 ~~~k~~lVTGa---s~GIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~   94 (279)
T 3sju_A           22 SRPQTAFVTGV---SSGIGLAVARTLAAR--G--IAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAA   94 (279)
T ss_dssp             ---CEEEEEST---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            45666655551   122001155566655  3  678888886542211       12567899999999999999887 


Q ss_pred             ------cCcEEEecccccc
Q psy1304         125 ------KCRVILNCVGPYT  137 (184)
Q Consensus       125 ------~~dVVIN~aGPf~  137 (184)
                            +.|+|||+||...
T Consensus        95 ~~~~~g~id~lv~nAg~~~  113 (279)
T 3sju_A           95 AVERFGPIGILVNSAGRNG  113 (279)
T ss_dssp             HHHHHCSCCEEEECCCCCC
T ss_pred             HHHHcCCCcEEEECCCCCC
Confidence                  5799999999653

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.02  E-value=0.015  Score=47.11  Aligned_cols=79  Identities=11%  Similarity=0.096  Sum_probs=51.0

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-------------------ccCCCCCCEEEEe
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-------------------RENLIDIPIIIAD  112 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-------------------~~~~~~v~~v~vD  112 (184)
                      .++||+.-|.|-   .+|----++..|++..    .++.+.+|+....                   .....++.++++|
T Consensus         7 ~l~gk~vlVTGa---s~gIG~~ia~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   79 (287)
T 3pxx_A            7 RVQDKVVLVTGG---ARGQGRSHAVKLAEEG----ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVD   79 (287)
T ss_dssp             TTTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECC
T ss_pred             ccCCCEEEEeCC---CChHHHHHHHHHHHCC----CeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEcc
Confidence            467777777662   1220011455555543    6788877752110                   0012467899999


Q ss_pred             CCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304         113 LKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus       113 v~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      +.|+++++++++       +.|+|||+||...
T Consensus        80 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~  111 (287)
T 3pxx_A           80 VRDRAAVSRELANAVAEFGKLDVVVANAGICP  111 (287)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCc
Confidence            999999999887       7899999999653

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=95.02  E-value=0.017  Score=47.16  Aligned_cols=77  Identities=16%  Similarity=0.134  Sum_probs=50.4

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHh--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMA--  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l--  123 (184)
                      ++||+.-|.|-   .+|--.-++.+|++.  +  .++.+.+|+.+...+       ...++.++++|+.|++++++++  
T Consensus        19 l~~k~vlVTGa---s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   91 (273)
T 1ae1_A           19 LKGTTALVTGG---SKGIGYAIVEELAGL--G--ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT   91 (273)
T ss_dssp             CTTCEEEEESC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECC---cchHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            56666666652   122111155666655  3  678888886532211       1245788999999999999888  


Q ss_pred             ------hcCcEEEeccccc
Q psy1304         124 ------KKCRVILNCVGPY  136 (184)
Q Consensus       124 ------~~~dVVIN~aGPf  136 (184)
                            .+.|+|||++|..
T Consensus        92 ~~~~~~g~id~lv~nAg~~  110 (273)
T 1ae1_A           92 VAHVFDGKLNILVNNAGVV  110 (273)
T ss_dssp             HHHHTTSCCCEEEECCCCC
T ss_pred             HHHHcCCCCcEEEECCCCC
Confidence                  4689999999964

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=95.00  E-value=0.021  Score=45.95  Aligned_cols=59  Identities=19%  Similarity=0.085  Sum_probs=42.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc-----ccCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY-----RENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg-----~~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+..     .....++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        20 ia~~l~~~G----~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~   90 (255)
T 2q2v_A           20 IAQVLARAG----ANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQ   90 (255)
T ss_dssp             HHHHHHHTT----CEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            566666653    5677777765310     0011456788899999999999998       899999999854

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=94.95  E-value=0.034  Score=46.11  Aligned_cols=79  Identities=10%  Similarity=0.072  Sum_probs=51.5

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc------------c-------ccCCCCCCEEEE
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL------------Y-------RENLIDIPIIIA  111 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l------------g-------~~~~~~v~~v~v  111 (184)
                      ..++||+.-|.|-   ++|----++..|++.  +  .++.+.+|++..            .       .....++.++++
T Consensus        24 ~~l~gk~~lVTGa---s~GIG~aia~~la~~--G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (299)
T 3t7c_A           24 GKVEGKVAFITGA---ARGQGRSHAITLARE--G--ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQV   96 (299)
T ss_dssp             CTTTTCEEEEEST---TSHHHHHHHHHHHHT--T--CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             cccCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEEC
Confidence            3578888877762   222111244555554  3  677777765210            0       011256789999


Q ss_pred             eCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304         112 DLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       112 Dv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      |+.|+++++++++       +.|++||++|..
T Consensus        97 Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~  128 (299)
T 3t7c_A           97 DVRDFDAMQAAVDDGVTQLGRLDIVLANAALA  128 (299)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            9999999999987       689999999943

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=94.94  E-value=0.015  Score=46.40  Aligned_cols=59  Identities=14%  Similarity=0.058  Sum_probs=41.8

Q ss_pred             hhhhhhhCCCCCceeEEeeee-ccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGA-RDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGr-r~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+| +......       ...++.++.+|+.|++++.++++       +.|+|||++|..
T Consensus        23 ~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~   96 (261)
T 1gee_A           23 MAIRFATE--K--AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLE   96 (261)
T ss_dssp             HHHHHHHT--T--CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            56666665  3  56777777 4321110       11356789999999999999887       789999999854

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=94.94  E-value=0.011  Score=48.08  Aligned_cols=79  Identities=14%  Similarity=0.153  Sum_probs=51.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-c-------cCCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-R-------ENLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-~-------~~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .|+||+.-|-|-   .+|--.-++..|++.  +  .++.+.+|+.... .       ....++.++.+|+.|++++.+++
T Consensus        26 ~l~~k~vlITGa---s~gIG~~la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   98 (271)
T 4iin_A           26 QFTGKNVLITGA---SKGIGAEIAKTLASM--G--LKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAI   98 (271)
T ss_dssp             CCSCCEEEETTC---SSHHHHHHHHHHHHT--T--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            467777777661   122001144455544  3  6788888743211 1       11246889999999999999998


Q ss_pred             h-------cCcEEEecccccc
Q psy1304         124 K-------KCRVILNCVGPYT  137 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf~  137 (184)
                      +       +.|+|||+||...
T Consensus        99 ~~~~~~~g~id~li~nAg~~~  119 (271)
T 4iin_A           99 QTIVQSDGGLSYLVNNAGVVR  119 (271)
T ss_dssp             HHHHHHHSSCCEEEECCCCCC
T ss_pred             HHHHHhcCCCCEEEECCCcCC
Confidence            7       7899999999653

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=94.94  E-value=0.025  Score=45.63  Aligned_cols=62  Identities=5%  Similarity=0.020  Sum_probs=43.4

Q ss_pred             HHHHh-hcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         119 ILIMA-KKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       119 L~a~l-~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      +++++ .++|+|+.|++|...  ..++..|+++|.|.++.+--..-..+...++.+.|+++|+.+
T Consensus        43 ~~~l~~~~~DvVv~~~~~~~~--~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~  105 (236)
T 2dc1_A           43 IDEFLQREMDVAVEAASQQAV--KDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRV  105 (236)
T ss_dssp             HHHHTTSCCSEEEECSCHHHH--HHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCE
T ss_pred             HHHHhcCCCCEEEECCCHHHH--HHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeE
Confidence            45566 699999999987633  577889999999999876322111222246677888888764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=94.91  E-value=0.016  Score=47.63  Aligned_cols=78  Identities=10%  Similarity=0.040  Sum_probs=51.7

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .++||+.-|.|-   ++|----++..|++.  +  .++.+.+|+.+...+       ...++.++++|+.|+++++++++
T Consensus        25 ~l~~k~~lVTGa---s~GIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   97 (270)
T 3ftp_A           25 TLDKQVAIVTGA---SRGIGRAIALELARR--G--AMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVE   97 (270)
T ss_dssp             TTTTCEEEETTC---SSHHHHHHHHHHHHT--T--CEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHH
Confidence            467777777662   122001145555554  3  678888876532211       12467899999999999999988


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             +.|+|||+||..
T Consensus        98 ~~~~~~g~iD~lvnnAg~~  116 (270)
T 3ftp_A           98 STLKEFGALNVLVNNAGIT  116 (270)
T ss_dssp             HHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence                   689999999954

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=94.90  E-value=0.02  Score=46.49  Aligned_cols=82  Identities=18%  Similarity=0.084  Sum_probs=48.5

Q ss_pred             cccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc-cc-------ccCCCCCCEEEEeCCCHHHH
Q psy1304          48 GESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC-LY-------RENLIDIPIIIADLKNESSI  119 (184)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~-lg-------~~~~~~v~~v~vDv~D~~sL  119 (184)
                      +.++.++||+.-|.|-   .+|--.-++.+|++.  +  .++.+.++++. ..       .....++.++.+|+.|++++
T Consensus        18 ~p~~~~~~k~vlITGa---s~gIG~~~a~~l~~~--G--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   90 (269)
T 3gk3_A           18 GPGSMQAKRVAFVTGG---MGGLGAAISRRLHDA--G--MAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESC   90 (269)
T ss_dssp             ------CCCEEEETTT---TSHHHHHHHHHHHTT--T--CEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHH
T ss_pred             CchhhhcCCEEEEECC---CchHHHHHHHHHHHC--C--CEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHH
Confidence            3344566777666551   122001145555544  3  67777774332 11       11225688999999999999


Q ss_pred             HHHhh-------cCcEEEeccccc
Q psy1304         120 LIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       120 ~a~l~-------~~dVVIN~aGPf  136 (184)
                      +++++       +.|+|||+||..
T Consensus        91 ~~~~~~~~~~~g~id~li~nAg~~  114 (269)
T 3gk3_A           91 ERCAEKVLADFGKVDVLINNAGIT  114 (269)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcC
Confidence            99887       789999999954

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=94.90  E-value=0.027  Score=40.34  Aligned_cols=86  Identities=8%  Similarity=0.019  Sum_probs=55.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCC-CCCCEEEEeCCCHHHHHHH-hhcCcEEEeccccccccchHHHHHHHHcC
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENL-IDIPIIIADLKNESSILIM-AKKCRVILNCVGPYTWYGEAVVKACIEAK  151 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~-~~v~~v~vDv~D~~sL~a~-l~~~dVVIN~aGPf~~~g~~VaeACieAG  151 (184)
                      ++..|.+..    .++.+..++.+.-.... ....++..|..|++.+.++ ++++|+||+|+|+....+..+++.|.+.|
T Consensus        21 ~a~~l~~~g----~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~   96 (144)
T 2hmt_A           21 IVKELHRMG----HEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELD   96 (144)
T ss_dssp             HHHHHHHTT----CCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchHHHHHHHHHHHHcC
Confidence            556666554    34455555443221111 2345677899999888876 88999999999865445567888888988


Q ss_pred             CCEee-CCCChHH
Q psy1304         152 THHVD-ITGEPYF  163 (184)
Q Consensus       152 thYVD-ltGE~~~  163 (184)
                      ..++= .+.+...
T Consensus        97 ~~~ii~~~~~~~~  109 (144)
T 2hmt_A           97 IPNIWVKAQNYYH  109 (144)
T ss_dssp             CSEEEEECCSHHH
T ss_pred             CCeEEEEeCCHHH
Confidence            87543 3334433

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=94.89  E-value=0.0062  Score=49.51  Aligned_cols=78  Identities=10%  Similarity=0.115  Sum_probs=51.2

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC----CCCCCEEEEeCCCHHHHHHHhh---
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN----LIDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      .|+||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+.    ..++.++++|+.|+++++++++   
T Consensus         5 ~l~gk~~lVTGa---s~gIG~a~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (255)
T 4eso_A            5 NYQGKKAIVIGG---THGMGLATVRRLVEG--G--AEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAG   77 (255)
T ss_dssp             TTTTCEEEEETC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHH
Confidence            467777766661   122001144555544  3  6788888876432111    1457899999999999998876   


Q ss_pred             ----cCcEEEeccccc
Q psy1304         125 ----KCRVILNCVGPY  136 (184)
Q Consensus       125 ----~~dVVIN~aGPf  136 (184)
                          +.|++||++|..
T Consensus        78 ~~~g~id~lv~nAg~~   93 (255)
T 4eso_A           78 QTLGAIDLLHINAGVS   93 (255)
T ss_dssp             HHHSSEEEEEECCCCC
T ss_pred             HHhCCCCEEEECCCCC
Confidence                579999999865

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=94.89  E-value=0.012  Score=47.57  Aligned_cols=59  Identities=14%  Similarity=0.076  Sum_probs=42.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCH-HHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNE-SSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~-~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .+|.+.+|+.....+        ...++.++.+|+.|+ ++++++++       +.|+|||+||..
T Consensus        28 ~a~~L~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~  102 (311)
T 3o26_A           28 ICKQLSSN--G--IMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVA  102 (311)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCccc
Confidence            45555554  4  688899887543211        114678999999998 88877776       789999999976

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=94.88  E-value=0.005  Score=50.98  Aligned_cols=77  Identities=12%  Similarity=0.151  Sum_probs=47.4

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC--------CCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN--------LIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~--------~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ++||+.-|.|-   ++|----++..|++.  +  .++.+.+|+.+...+.        ...+.++++|+.|+++++++++
T Consensus        31 l~gk~~lVTGa---s~GIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  103 (281)
T 4dry_A           31 GEGRIALVTGG---GTGVGRGIAQALSAE--G--YSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFA  103 (281)
T ss_dssp             ---CEEEETTT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHH
Confidence            56676666651   122001145555554  4  6788888876432111        1224889999999999999887


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             +.|+|||+||..
T Consensus       104 ~~~~~~g~iD~lvnnAG~~  122 (281)
T 4dry_A          104 AVRAEFARLDLLVNNAGSN  122 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence                   459999999854

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=94.88  E-value=0.012  Score=48.25  Aligned_cols=82  Identities=17%  Similarity=0.128  Sum_probs=51.9

Q ss_pred             ccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc-ccc-------cCCCCCCEEEEeCCCHHHHH
Q psy1304          49 ESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC-LYR-------ENLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~-lg~-------~~~~~v~~v~vDv~D~~sL~  120 (184)
                      ..-.++||+.-|.|-   ++|--.-++..|++..    .++.+..|+.. ...       ....++.++++|+.|+++++
T Consensus        22 ~~~~l~~k~vlVTGa---s~gIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~   94 (269)
T 4dmm_A           22 TALPLTDRIALVTGA---SRGIGRAIALELAAAG----AKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVE   94 (269)
T ss_dssp             --CTTTTCEEEETTC---SSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred             cccCCCCCEEEEECC---CCHHHHHHHHHHHHCC----CEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            344678888777762   1220111455555543    56777766321 110       11246788999999999999


Q ss_pred             HHhh-------cCcEEEecccccc
Q psy1304         121 IMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus       121 a~l~-------~~dVVIN~aGPf~  137 (184)
                      ++++       +.|+|||+||...
T Consensus        95 ~~~~~~~~~~g~id~lv~nAg~~~  118 (269)
T 4dmm_A           95 ALFAAVIERWGRLDVLVNNAGITR  118 (269)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCC
Confidence            9988       6899999999653

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=94.87  E-value=0.0057  Score=50.44  Aligned_cols=77  Identities=13%  Similarity=0.129  Sum_probs=49.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh----
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK----  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~----  124 (184)
                      ++||+.-|.|-   ++|--.-++.+|++..    .++.+.+|+.+...+    ...++.++++|+.|++++.++++    
T Consensus         3 l~gk~~lVTGa---s~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            3 LTGEVALITGG---ASGLGRALVDRFVAEG----ARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLA   75 (281)
T ss_dssp             TTTCEEEEETC---SSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECC---CcHHHHHHHHHHHHCc----CEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45666655551   1220011555555553    678888886542211    12567899999999999998887    


Q ss_pred             ---cCcEEEeccccc
Q psy1304         125 ---KCRVILNCVGPY  136 (184)
Q Consensus       125 ---~~dVVIN~aGPf  136 (184)
                         +.|++||+||.+
T Consensus        76 ~~g~iD~lvnnAg~~   90 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIW   90 (281)
T ss_dssp             HHSCCCEEECCCCCC
T ss_pred             hcCCCCEEEECCCcC
Confidence               469999999964

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=94.86  E-value=0.0057  Score=50.72  Aligned_cols=77  Identities=12%  Similarity=0.120  Sum_probs=50.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      ++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+       ...++.++++|+.|+++++++++ 
T Consensus         6 l~gk~vlVTGa---s~GIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   78 (280)
T 3tox_A            6 LEGKIAIVTGA---SSGIGRAAALLFARE--G--AKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVEL   78 (280)
T ss_dssp             TTTCEEEESST---TSHHHHHHHHHHHHT--T--CEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            56676666651   122001145555554  3  678888886532111       12567788999999999999987 


Q ss_pred             ------cCcEEEeccccc
Q psy1304         125 ------KCRVILNCVGPY  136 (184)
Q Consensus       125 ------~~dVVIN~aGPf  136 (184)
                            +.|++||+||.+
T Consensus        79 ~~~~~g~iD~lvnnAg~~   96 (280)
T 3tox_A           79 AVRRFGGLDTAFNNAGAL   96 (280)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCC
Confidence                  689999999954

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=94.86  E-value=0.0094  Score=49.17  Aligned_cols=78  Identities=15%  Similarity=0.102  Sum_probs=52.4

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+       ...++.++++|+.|+++++++++
T Consensus        30 ~l~gk~~lVTGa---s~GIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  102 (275)
T 4imr_A           30 GLRGRTALVTGS---SRGIGAAIAEGLAGA--G--AHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIE  102 (275)
T ss_dssp             CCTTCEEEETTC---SSHHHHHHHHHHHHT--T--CEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHH
T ss_pred             CCCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Confidence            467787777662   122111145555554  3  678888886643221       12567899999999999999887


Q ss_pred             ------cCcEEEeccccc
Q psy1304         125 ------KCRVILNCVGPY  136 (184)
Q Consensus       125 ------~~dVVIN~aGPf  136 (184)
                            +.|++||+||..
T Consensus       103 ~~~~~g~iD~lvnnAg~~  120 (275)
T 4imr_A          103 RAEAIAPVDILVINASAQ  120 (275)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHhCCCCEEEECCCCC
Confidence                  689999999953

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=94.85  E-value=0.0052  Score=51.66  Aligned_cols=78  Identities=23%  Similarity=0.179  Sum_probs=53.4

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      |+||+.-|.|-   ++|----++..|++..    .++++.+|+++...+       ...+..++++|+.|+++++++++ 
T Consensus         7 L~gKvalVTGa---s~GIG~aia~~la~~G----a~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~   79 (255)
T 4g81_D            7 LTGKTALVTGS---ARGLGFAYAEGLAAAG----ARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSK   79 (255)
T ss_dssp             CTTCEEEETTC---SSHHHHHHHHHHHHTT----CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            68999888772   2331112455555544    789999987643221       12567788999999999998876 


Q ss_pred             ------cCcEEEecccccc
Q psy1304         125 ------KCRVILNCVGPYT  137 (184)
Q Consensus       125 ------~~dVVIN~aGPf~  137 (184)
                            +.|++||+||-..
T Consensus        80 ~~~~~G~iDiLVNNAG~~~   98 (255)
T 4g81_D           80 LDAEGIHVDILINNAGIQY   98 (255)
T ss_dssp             HHHTTCCCCEEEECCCCCC
T ss_pred             HHHHCCCCcEEEECCCCCC
Confidence                  3699999998543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=94.85  E-value=0.014  Score=48.26  Aligned_cols=59  Identities=14%  Similarity=0.099  Sum_probs=43.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+.+...       ....++.++++|+.|+++++++++       +.|++||+||..
T Consensus        44 ia~~la~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~  116 (283)
T 3v8b_A           44 TALALAAD--G--VTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGIN  116 (283)
T ss_dssp             HHHHHHHT--T--CEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            55555554  3  67888888653211       112467899999999999999887       689999999954

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=94.84  E-value=0.01  Score=49.38  Aligned_cols=75  Identities=13%  Similarity=0.105  Sum_probs=50.4

Q ss_pred             cccceeeecc-cccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC------CCCCEEEEeCCCHHHHHHHhhc
Q psy1304          53 FRGQTLSVQD-KIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL------IDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        53 ~~~~~~~~~~-~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~------~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      ++||+.-|-| -=--||.    ++.+|++..    .+|.+.+|+.+...+..      .++.++.+|+.|++++.+++++
T Consensus       117 l~gk~vlVtGaaGGiG~a----ia~~L~~~G----~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~  188 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMR----SAALLAGEG----AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG  188 (287)
T ss_dssp             CTTCEEEEETCSSHHHHH----HHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT
T ss_pred             CCCCEEEEECCCcHHHHH----HHHHHHHCc----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHh
Confidence            5777776665 1111222    555555553    56888888653221110      2467889999999999999999


Q ss_pred             CcEEEecccc
Q psy1304         126 CRVILNCVGP  135 (184)
Q Consensus       126 ~dVVIN~aGP  135 (184)
                      +|+||||+|.
T Consensus       189 ~DvlVn~ag~  198 (287)
T 1lu9_A          189 AHFVFTAGAI  198 (287)
T ss_dssp             CSEEEECCCT
T ss_pred             CCEEEECCCc
Confidence            9999999973

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=94.84  E-value=0.022  Score=46.37  Aligned_cols=79  Identities=11%  Similarity=0.071  Sum_probs=48.9

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc---c---cCCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY---R---ENLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg---~---~~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      ++||+.-|.|--. ++|--.-++.+|++.  +  .++.+.+|+....   .   ...+.+.++.+|+.|+++++++++  
T Consensus         4 l~~k~vlVTGas~-~~gIG~~~a~~l~~~--G--~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   78 (275)
T 2pd4_A            4 LKGKKGLIVGVAN-NKSIAYGIAQSCFNQ--G--ATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSV   78 (275)
T ss_dssp             TTTCEEEEECCCS-TTSHHHHHHHHHHTT--T--CEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCC-CCcHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHH
Confidence            5566666655110 012001144455544  3  6788888875310   0   011347899999999999999887  


Q ss_pred             -----cCcEEEeccccc
Q psy1304         125 -----KCRVILNCVGPY  136 (184)
Q Consensus       125 -----~~dVVIN~aGPf  136 (184)
                           +.|+|||++|..
T Consensus        79 ~~~~g~id~lv~nAg~~   95 (275)
T 2pd4_A           79 KKDLGSLDFIVHSVAFA   95 (275)
T ss_dssp             HHHTSCEEEEEECCCCC
T ss_pred             HHHcCCCCEEEECCccC
Confidence                 569999999854

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=94.83  E-value=0.012  Score=47.67  Aligned_cols=59  Identities=10%  Similarity=0.018  Sum_probs=41.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------C--CCCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------N--LIDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~--~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++..|++.  +  .++.+.+|+.+....       .  ..++.++.+|+.|++++++++++       .|+|||++|..
T Consensus        23 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~   97 (267)
T 2gdz_A           23 FAEALLLK--G--AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN   97 (267)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55666655  3  677777776532110       0  13467899999999999998875       69999999965

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=94.83  E-value=0.011  Score=47.28  Aligned_cols=56  Identities=9%  Similarity=-0.081  Sum_probs=41.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh---------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK---------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~---------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.....   ....++.+|+.|+++++++++         +.|+|||++|..
T Consensus        23 ia~~l~~~--G--~~V~~~~r~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~   87 (241)
T 1dhr_A           23 CVQAFRAR--N--WWVASIDVVENEEA---SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGW   87 (241)
T ss_dssp             HHHHHHTT--T--CEEEEEESSCCTTS---SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred             HHHHHHhC--C--CEEEEEeCChhhcc---CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEccccc
Confidence            55666654  3  67888888765422   234677899999999998887         689999999953

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=94.81  E-value=0.017  Score=46.71  Aligned_cols=78  Identities=12%  Similarity=0.078  Sum_probs=50.0

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .++||+.-|-|-   .++--.-++.+|++.  +  .++.+.+|+......       ...++.++++|+.|+++++++++
T Consensus        31 ~l~~k~vlITGa---sggIG~~la~~L~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~  103 (279)
T 3ctm_A           31 SLKGKVASVTGS---SGGIGWAVAEAYAQA--G--ADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETIS  103 (279)
T ss_dssp             CCTTCEEEETTT---TSSHHHHHHHHHHHH--T--CEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHH
Confidence            367777766651   122011145555544  3  567777776532110       01457889999999999999887


Q ss_pred             c-------CcEEEeccccc
Q psy1304         125 K-------CRVILNCVGPY  136 (184)
Q Consensus       125 ~-------~dVVIN~aGPf  136 (184)
                      +       .|+|||++|..
T Consensus       104 ~~~~~~g~id~li~~Ag~~  122 (279)
T 3ctm_A          104 QQEKDFGTIDVFVANAGVT  122 (279)
T ss_dssp             HHHHHHSCCSEEEECGGGS
T ss_pred             HHHHHhCCCCEEEECCccc
Confidence            6       89999999844

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=94.80  E-value=0.016  Score=46.74  Aligned_cols=80  Identities=19%  Similarity=0.154  Sum_probs=51.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc-------c-CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR-------E-NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~-------~-~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .++||+.-|-|--- +||--.-++..|++.  +  .++.+.+|++....       . ...++.++++|+.|++++++++
T Consensus         4 ~l~~k~vlVTGasg-~~GIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   78 (266)
T 3oig_A            4 SLEGRNIVVMGVAN-KRSIAWGIARSLHEA--G--ARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCF   78 (266)
T ss_dssp             CCTTCEEEEECCCS-TTSHHHHHHHHHHHT--T--CEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHH
T ss_pred             ccCCCEEEEEcCCC-CCcHHHHHHHHHHHC--C--CEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHH
Confidence            36777777766210 023111245555554  3  67888877643211       0 1136889999999999999988


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|++||++|..
T Consensus        79 ~~~~~~~g~id~li~~Ag~~   98 (266)
T 3oig_A           79 ASIKEQVGVIHGIAHCIAFA   98 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHhCCeeEEEEccccc
Confidence            7       579999999854

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=94.79  E-value=0.032  Score=47.42  Aligned_cols=32  Identities=16%  Similarity=0.322  Sum_probs=29.1

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccc
Q psy1304         104 IDIPIIIADLKNESSILIMAK-------KCRVILNCVGP  135 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGP  135 (184)
                      .++.++.+|+.|+++++++++       +.|+|||+||.
T Consensus        59 ~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~   97 (324)
T 3u9l_A           59 VDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGH   97 (324)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred             CcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            568899999999999999998       79999999993

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.79  E-value=0.0091  Score=48.86  Aligned_cols=59  Identities=14%  Similarity=0.149  Sum_probs=42.8

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CC-CCCCEEEEeCCCHHHHHHHhhc-------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NL-IDIPIIIADLKNESSILIMAKK-------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~-~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+   .. .++.++++|+.|++++++++++       .|+|||++|..
T Consensus        22 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~   91 (263)
T 2a4k_A           22 ALDLFARE--G--ASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVA   91 (263)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGT
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCC
Confidence            55666655  3  678888887543211   11 4577899999999999998875       59999999954

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=94.76  E-value=0.018  Score=46.61  Aligned_cols=59  Identities=17%  Similarity=0.115  Sum_probs=41.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc---c---cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY---R---ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg---~---~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+....   .   ...+...++++|+.|+++++++++       +.|+|||++|..
T Consensus        27 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~   98 (265)
T 1qsg_A           27 IAQAMHRE--G--AELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFA   98 (265)
T ss_dssp             HHHHHHHT--T--CEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55556554  3  6788888765110   0   011345789999999999999987       579999999854

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=94.74  E-value=0.018  Score=47.52  Aligned_cols=78  Identities=17%  Similarity=0.046  Sum_probs=49.9

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc-cc--------cccCCCCCCEEEEeCCCHHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD-CL--------YRENLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~-~l--------g~~~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      .+.||+.-|.|-   ++|----++..|++..    .++.+.+|+. +.        ......++.++.+|+.|+++++++
T Consensus        22 ~l~~k~~lVTGa---s~GIG~~ia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   94 (281)
T 3v2h_A           22 SMMTKTAVITGS---TSGIGLAIARTLAKAG----ANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADM   94 (281)
T ss_dssp             CCTTCEEEEETC---SSHHHHHHHHHHHHTT----CEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHH
T ss_pred             ccCCCEEEEeCC---CcHHHHHHHHHHHHCC----CEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHH
Confidence            355666655551   1220011555566554    6788888743 11        110125678889999999999999


Q ss_pred             hh-------cCcEEEeccccc
Q psy1304         123 AK-------KCRVILNCVGPY  136 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf  136 (184)
                      ++       +.|+|||+||..
T Consensus        95 ~~~~~~~~g~iD~lv~nAg~~  115 (281)
T 3v2h_A           95 MAMVADRFGGADILVNNAGVQ  115 (281)
T ss_dssp             HHHHHHHTSSCSEEEECCCCC
T ss_pred             HHHHHHHCCCCCEEEECCCCC
Confidence            87       689999999964

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=94.73  E-value=0.014  Score=47.19  Aligned_cols=59  Identities=14%  Similarity=0.100  Sum_probs=41.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc---c---cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY---R---ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg---~---~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+....   .   +..+.+.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        26 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~   97 (261)
T 2wyu_A           26 IAAKLKEA--G--AEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFA   97 (261)
T ss_dssp             HHHHHHHH--T--CEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            55566654  3  6788888765310   0   011347789999999999999987       679999999854

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=94.73  E-value=0.012  Score=48.01  Aligned_cols=80  Identities=15%  Similarity=0.116  Sum_probs=51.2

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc-cc-------cCCCCCCEEEEeCCCHHHHHH
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL-YR-------ENLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l-g~-------~~~~~v~~v~vDv~D~~sL~a  121 (184)
                      ...++||+.-|.|-   ++|----++.+|++..    .++.+..++... ..       ....++.++++|+.|++++++
T Consensus        13 ~~~l~~k~~lVTGa---s~gIG~aia~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   85 (270)
T 3is3_A           13 PGRLDGKVALVTGS---GRGIGAAVAVHLGRLG----AKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVK   85 (270)
T ss_dssp             TTCCTTCEEEESCT---TSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCcCCCEEEEECC---CchHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            34578888777762   2220111445555443    667776554321 00       112567899999999999999


Q ss_pred             Hhh-------cCcEEEeccccc
Q psy1304         122 MAK-------KCRVILNCVGPY  136 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGPf  136 (184)
                      +++       +.|++||++|..
T Consensus        86 ~~~~~~~~~g~id~lvnnAg~~  107 (270)
T 3is3_A           86 LFDQAVAHFGHLDIAVSNSGVV  107 (270)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            987       579999999965

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=94.73  E-value=0.012  Score=48.53  Aligned_cols=77  Identities=17%  Similarity=0.079  Sum_probs=48.4

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc-ccc-------cCCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC-LYR-------ENLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~-lg~-------~~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .++||+.-|.|-   ++|----++.+|++.  +  .++.+.++++. ...       ....++.++++|+.|++++++++
T Consensus        26 ~~~~k~~lVTGa---s~GIG~aia~~la~~--G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   98 (280)
T 4da9_A           26 QKARPVAIVTGG---RRGIGLGIARALAAS--G--FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATV   98 (280)
T ss_dssp             CCCCCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHH
T ss_pred             ccCCCEEEEecC---CCHHHHHHHHHHHHC--C--CeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            356666666551   122001155555554  3  67878775332 110       01256889999999999999998


Q ss_pred             h-------cCcEEEecccc
Q psy1304         124 K-------KCRVILNCVGP  135 (184)
Q Consensus       124 ~-------~~dVVIN~aGP  135 (184)
                      +       +.|+|||+||.
T Consensus        99 ~~~~~~~g~iD~lvnnAg~  117 (280)
T 4da9_A           99 DAVVAEFGRIDCLVNNAGI  117 (280)
T ss_dssp             HHHHHHHSCCCEEEEECC-
T ss_pred             HHHHHHcCCCCEEEECCCc
Confidence            8       78999999996

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=94.73  E-value=0.027  Score=45.05  Aligned_cols=59  Identities=15%  Similarity=0.150  Sum_probs=42.0

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc--CCCCCCEEEEeCCCHHHHHHHhh---cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE--NLIDIPIIIADLKNESSILIMAK---KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~--~~~~v~~v~vDv~D~~sL~a~l~---~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+.+|+.+...+  ...++.++++|+.|+++++++++   +.|+|||++|..
T Consensus        22 ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~   85 (246)
T 2ag5_A           22 AALAFAREG----AKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFV   85 (246)
T ss_dssp             HHHHHHHTT----CEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccC
Confidence            556666553    678888876543221  12367789999999999987764   579999999954

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=94.72  E-value=0.0079  Score=48.42  Aligned_cols=82  Identities=11%  Similarity=0.074  Sum_probs=51.8

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-c--------cCCCCCCEEEEeCCCHHHHHH
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-R--------ENLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-~--------~~~~~v~~v~vDv~D~~sL~a  121 (184)
                      ..++||+.-|.|--. ++|----++.+|++.  +  .++.+.+|++... .        ....++.++++|+.|++++++
T Consensus        16 ~~l~~k~vlITGas~-~~giG~~~a~~l~~~--G--~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   90 (267)
T 3gdg_A           16 LSLKGKVVVVTGASG-PKGMGIEAARGCAEM--G--AAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEK   90 (267)
T ss_dssp             HCCTTCEEEETTCCS-SSSHHHHHHHHHHHT--S--CEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHH
T ss_pred             cCcCCCEEEEECCCC-CCChHHHHHHHHHHC--C--CeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHH
Confidence            357788877776210 022111144555544  3  6777777654321 0        012567889999999999999


Q ss_pred             Hhhc-------CcEEEecccccc
Q psy1304         122 MAKK-------CRVILNCVGPYT  137 (184)
Q Consensus       122 ~l~~-------~dVVIN~aGPf~  137 (184)
                      +++.       .|+|||+||...
T Consensus        91 ~~~~~~~~~g~id~li~nAg~~~  113 (267)
T 3gdg_A           91 LVKDVVADFGQIDAFIANAGATA  113 (267)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcCC
Confidence            9874       599999999653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.70  E-value=0.01  Score=47.11  Aligned_cols=56  Identities=2%  Similarity=-0.110  Sum_probs=41.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh---------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK---------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~---------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...   ....++.+|+.|+++++++++         +.|+|||++|..
T Consensus        19 ~a~~l~~~--G--~~V~~~~r~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~   83 (236)
T 1ooe_A           19 ILEFFKKN--G--YTVLNIDLSANDQA---DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGW   83 (236)
T ss_dssp             HHHHHHHT--T--EEEEEEESSCCTTS---SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEecCccccc---cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCccc
Confidence            56666655  4  67888888765432   234567899999999988886         689999999943

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=94.69  E-value=0.008  Score=49.51  Aligned_cols=77  Identities=19%  Similarity=0.201  Sum_probs=50.0

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      ++||+.-|.|-   .+|--.-++.+|++.  +  .++.+.+|+.+...+      ..+++.++.+|+.|+++++++++  
T Consensus        27 l~~k~vlVTGa---s~gIG~aia~~L~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~   99 (276)
T 2b4q_A           27 LAGRIALVTGG---SRGIGQMIAQGLLEA--G--ARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQAL   99 (276)
T ss_dssp             CTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CChHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHH
Confidence            67777766662   122011145555554  3  678888876532211      11256788899999999999887  


Q ss_pred             -----cCcEEEeccccc
Q psy1304         125 -----KCRVILNCVGPY  136 (184)
Q Consensus       125 -----~~dVVIN~aGPf  136 (184)
                           +.|+|||+||..
T Consensus       100 ~~~~g~iD~lvnnAg~~  116 (276)
T 2b4q_A          100 GELSARLDILVNNAGTS  116 (276)
T ss_dssp             HHHCSCCSEEEECCCCC
T ss_pred             HHhcCCCCEEEECCCCC
Confidence                 689999999954

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=94.68  E-value=0.022  Score=46.30  Aligned_cols=78  Identities=10%  Similarity=0.085  Sum_probs=50.8

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      .++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+....         ...++.++++|+.|+++++++
T Consensus         5 ~l~~k~~lVTGa---s~GIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~   77 (265)
T 3lf2_A            5 DLSEAVAVVTGG---SSGIGLATVELLLEA--G--AAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAF   77 (265)
T ss_dssp             CCTTCEEEEETC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHH
T ss_pred             CcCCCEEEEeCC---CChHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHH
Confidence            356777666651   122111155555555  3  678888886542211         113478899999999999988


Q ss_pred             hh-------cCcEEEeccccc
Q psy1304         123 AK-------KCRVILNCVGPY  136 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf  136 (184)
                      ++       +.|++||++|..
T Consensus        78 ~~~~~~~~g~id~lvnnAg~~   98 (265)
T 3lf2_A           78 AEACERTLGCASILVNNAGQG   98 (265)
T ss_dssp             HHHHHHHHCSCSEEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            86       579999999964

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=94.62  E-value=0.0099  Score=47.11  Aligned_cols=59  Identities=17%  Similarity=0.198  Sum_probs=41.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccC----CCCC-CEEEEeCCCHHHHHHHhh------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYREN----LIDI-PIIIADLKNESSILIMAK------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v-~~v~vDv~D~~sL~a~l~------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+.    ..++ .++.+|+.|+++++++++      +.|+|||++|..
T Consensus        27 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~Ag~~   96 (254)
T 2wsb_A           27 ICRAFAAS--G--ARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIA   96 (254)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEECCccC
Confidence            55666654  3  6788888865422110    1234 788999999999998874      689999999954

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=94.62  E-value=0.017  Score=46.18  Aligned_cols=77  Identities=12%  Similarity=0.044  Sum_probs=48.0

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeee-cccccc-------cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGA-RDCLYR-------ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGr-r~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ++||+.-|-|-   .++--.-++.+|++..    .++.+.+| +.....       ....++.++.+|+.|+++++++++
T Consensus        19 ~~~k~vlItGa---sggiG~~la~~l~~~G----~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   91 (274)
T 1ja9_A           19 LAGKVALTTGA---GRGIGRGIAIELGRRG----ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFD   91 (274)
T ss_dssp             TTTCEEEETTT---TSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CchHHHHHHHHHHHCC----CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            55666655551   1110011555666543    56777766 322110       012457789999999999999988


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             +.|+|||++|..
T Consensus        92 ~~~~~~~~~d~vi~~Ag~~  110 (274)
T 1ja9_A           92 KAVSHFGGLDFVMSNSGME  110 (274)
T ss_dssp             HHHHHHSCEEEEECCCCCC
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence                   789999999954

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=94.61  E-value=0.035  Score=45.43  Aligned_cols=79  Identities=11%  Similarity=0.055  Sum_probs=48.2

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ..++||+.-|.|-   .+|--..++..|++.  +  .++.+.+|+.+....       ...++.++.+|+.|++++++++
T Consensus        40 ~~l~~k~vlITGa---sggIG~~la~~L~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~  112 (285)
T 2c07_A           40 YCGENKVALVTGA---GRGIGREIAKMLAKS--V--SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVI  112 (285)
T ss_dssp             CCCSSCEEEEEST---TSHHHHHHHHHHTTT--S--SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCEEEEECC---CcHHHHHHHHHHHHc--C--CEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHH
Confidence            3456666666651   111000144444443  3  567776665432110       1245778999999999999988


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|+|||++|..
T Consensus       113 ~~~~~~~~~id~li~~Ag~~  132 (285)
T 2c07_A          113 NKILTEHKNVDILVNNAGIT  132 (285)
T ss_dssp             HHHHHHCSCCCEEEECCCCC
T ss_pred             HHHHHhcCCCCEEEECCCCC
Confidence            5       589999999964

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=94.61  E-value=0.021  Score=45.74  Aligned_cols=59  Identities=17%  Similarity=0.080  Sum_probs=41.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeecc-cccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARD-CLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~-~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+..++. +...       ....++.++++|+.|+++++++++       +.|++||+||..
T Consensus        20 ia~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~   93 (246)
T 3osu_A           20 IALQLAEEG----YNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT   93 (246)
T ss_dssp             HHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            566666654    5666665533 1110       112467789999999999999988       789999999965

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=94.60  E-value=0.014  Score=47.59  Aligned_cols=79  Identities=18%  Similarity=0.224  Sum_probs=51.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      .++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.+...+         ....+.++.+|+.|+++++++
T Consensus         7 ~l~~k~~lVTGa---s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~   79 (267)
T 3t4x_A            7 QLKGKTALVTGS---TAGIGKAIATSLVAE--G--ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDV   79 (267)
T ss_dssp             CCTTCEEEETTC---SSHHHHHHHHHHHHT--T--CEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHH
T ss_pred             ccCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHH
Confidence            356777666651   122001145555554  3  678888886532211         013467889999999999999


Q ss_pred             hh---cCcEEEecccccc
Q psy1304         123 AK---KCRVILNCVGPYT  137 (184)
Q Consensus       123 l~---~~dVVIN~aGPf~  137 (184)
                      ++   +.|++||++|.+.
T Consensus        80 ~~~~g~id~lv~nAg~~~   97 (267)
T 3t4x_A           80 IEKYPKVDILINNLGIFE   97 (267)
T ss_dssp             HHHCCCCSEEEECCCCCC
T ss_pred             HHhcCCCCEEEECCCCCC
Confidence            87   6899999999653

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=94.60  E-value=0.014  Score=47.67  Aligned_cols=80  Identities=9%  Similarity=0.121  Sum_probs=51.1

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeec-------------cccc-------ccCCCCCCEEE
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGAR-------------DCLY-------RENLIDIPIII  110 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr-------------~~lg-------~~~~~~v~~v~  110 (184)
                      ..++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+             .+..       .....++.+++
T Consensus        11 ~~l~gk~~lVTGa---s~gIG~a~a~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (280)
T 3pgx_A           11 GSLQGRVAFITGA---ARGQGRSHAVRLAAE--G--ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRV   83 (280)
T ss_dssp             CTTTTCEEEEEST---TSHHHHHHHHHHHHT--T--CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             cccCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEE
Confidence            3477887777662   122011144455544  3  678887763             1110       01124677899


Q ss_pred             EeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304         111 ADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus       111 vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      +|+.|+++++++++       +.|++||+||...
T Consensus        84 ~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~  117 (280)
T 3pgx_A           84 LDVRDDAALRELVADGMEQFGRLDVVVANAGVLS  117 (280)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred             cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            99999999999987       6899999999653

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=94.60  E-value=0.018  Score=45.79  Aligned_cols=80  Identities=10%  Similarity=0.130  Sum_probs=50.1

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      ..++||++-|-|-   .+|----++..|++.  +  .++.+.+|+.+....    ...++.+..+|+.|++++.++++  
T Consensus        10 ~~~~~k~vlVTGa---s~gIG~~~a~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   82 (249)
T 3f9i_A           10 IDLTGKTSLITGA---SSGIGSAIARLLHKL--G--SKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT   82 (249)
T ss_dssp             CCCTTCEEEETTT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC
T ss_pred             ccCCCCEEEEECC---CChHHHHHHHHHHHC--C--CEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc
Confidence            3456666666551   111000145555544  3  678888886543211    11467889999999999999998  


Q ss_pred             -cCcEEEecccccc
Q psy1304         125 -KCRVILNCVGPYT  137 (184)
Q Consensus       125 -~~dVVIN~aGPf~  137 (184)
                       +.|+|||++|...
T Consensus        83 ~~id~li~~Ag~~~   96 (249)
T 3f9i_A           83 SNLDILVCNAGITS   96 (249)
T ss_dssp             SCCSEEEECCC---
T ss_pred             CCCCEEEECCCCCC
Confidence             5799999999643

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=94.53  E-value=0.013  Score=47.76  Aligned_cols=58  Identities=10%  Similarity=0.060  Sum_probs=41.0

Q ss_pred             hhhhhhhCCCCCceeEEee-eecccccc-------cCCCCCCEEEEeCCCHHHHHHHhhc-------CcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLL-GARDCLYR-------ENLIDIPIIIADLKNESSILIMAKK-------CRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLA-Grr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~~-------~dVVIN~aGP  135 (184)
                      ++.+|++..    .++.+. +|+.....       ....++.++++|+.|+++++++++.       .|++||+||.
T Consensus        20 ia~~l~~~G----~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~   92 (258)
T 3oid_A           20 AAIRLAENG----YNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAAS   92 (258)
T ss_dssp             HHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            666666654    566665 56543211       1124678999999999999999875       4999999984

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=94.51  E-value=0.031  Score=43.87  Aligned_cols=59  Identities=14%  Similarity=0.055  Sum_probs=40.2

Q ss_pred             hhhhhhhCCCCCceeEEee-eeccccccc-------CCCCCCE-EEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLL-GARDCLYRE-------NLIDIPI-IIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLA-Grr~~lg~~-------~~~~v~~-v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+. +|+......       ...++.+ +.+|+.|+++++++++       +.|+|||++|..
T Consensus        17 ~a~~l~~~G----~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~   91 (245)
T 2ph3_A           17 IALRLAEDG----FALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGIT   91 (245)
T ss_dssp             HHHHHHTTT----CEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            667777653    456665 565432110       1134556 8899999999998876       789999999954

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=94.49  E-value=0.013  Score=47.34  Aligned_cols=78  Identities=17%  Similarity=0.150  Sum_probs=52.0

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeC--CCHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADL--KNESSILI  121 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv--~D~~sL~a  121 (184)
                      .++||+.-|.|-   ++|--.-++..|++.  +  .++.+.+|+.+...+        ...++.++.+|+  .|++++++
T Consensus         9 ~l~~k~vlVTGa---s~gIG~aia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   81 (252)
T 3f1l_A            9 LLNDRIILVTGA---SDGIGREAAMTYARY--G--ATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQ   81 (252)
T ss_dssp             TTTTCEEEEEST---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHH
T ss_pred             ccCCCEEEEeCC---CChHHHHHHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHH
Confidence            477888777762   222111144555544  3  678888887543211        113678999999  89999998


Q ss_pred             Hhh-------cCcEEEeccccc
Q psy1304         122 MAK-------KCRVILNCVGPY  136 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGPf  136 (184)
                      +++       +.|++||++|..
T Consensus        82 ~~~~~~~~~g~id~lv~nAg~~  103 (252)
T 3f1l_A           82 LAQRIAVNYPRLDGVLHNAGLL  103 (252)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCC
T ss_pred             HHHHHHHhCCCCCEEEECCccC
Confidence            887       689999999954

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=94.47  E-value=0.021  Score=44.87  Aligned_cols=59  Identities=15%  Similarity=0.044  Sum_probs=41.0

Q ss_pred             hhhhhhhCCCCCceeEEe-eeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGL-LGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaL-AGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+ .+|+......       ...++.++.+|+.|+++++++++       +.|+|||++|..
T Consensus        17 la~~l~~~G----~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~   90 (244)
T 1edo_A           17 IALSLGKAG----CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGIT   90 (244)
T ss_dssp             HHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            677777654    45555 3454322110       11357789999999999999988       689999999954

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=94.44  E-value=0.054  Score=43.48  Aligned_cols=74  Identities=12%  Similarity=0.116  Sum_probs=47.6

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh-------
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK-------  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~-------  124 (184)
                      .++||+.-|-|-   .+|--..++.+|++.  +  .++.+.+|+.+..    ..+..+.+|+.|+++++++++       
T Consensus        12 ~l~~k~vlVTGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g   80 (247)
T 1uzm_A           12 PFVSRSVLVTGG---NRGIGLAIAQRLAAD--G--HKVAVTHRGSGAP----KGLFGVEVDVTDSDAVDRAFTAVEEHQG   80 (247)
T ss_dssp             CCCCCEEEETTT---TSHHHHHHHHHHHHT--T--CEEEEEESSSCCC----TTSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CEEEEEeCChHHH----HHhcCeeccCCCHHHHHHHHHHHHHHcC
Confidence            356666666551   112001145555554  3  6788887765432    223358899999999998887       


Q ss_pred             cCcEEEeccccc
Q psy1304         125 KCRVILNCVGPY  136 (184)
Q Consensus       125 ~~dVVIN~aGPf  136 (184)
                      +.|+|||++|..
T Consensus        81 ~id~lv~~Ag~~   92 (247)
T 1uzm_A           81 PVEVLVSNAGLS   92 (247)
T ss_dssp             SCSEEEEECSCC
T ss_pred             CCCEEEECCCCC
Confidence            469999999964

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=94.39  E-value=0.028  Score=44.99  Aligned_cols=59  Identities=10%  Similarity=0.036  Sum_probs=41.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHh--------hcCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMA--------KKCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l--------~~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+......       ...++.++.+|+.|++++++++        .+.|+|||++|..
T Consensus        30 la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~  103 (266)
T 1xq1_A           30 IVEEFAGF--G--AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI  103 (266)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCC
Confidence            55556554  3  577777776532111       1245788999999999999888        4689999999954

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=94.38  E-value=0.029  Score=47.12  Aligned_cols=80  Identities=14%  Similarity=0.138  Sum_probs=51.5

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-------------------ccCCCCCCEEEE
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-------------------RENLIDIPIIIA  111 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-------------------~~~~~~v~~v~v  111 (184)
                      ..++||+.-|.|-   ++|--.-++..|++..    .++.+.+|++...                   .....++.++++
T Consensus        42 ~~l~gk~~lVTGa---s~GIG~aia~~la~~G----~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (317)
T 3oec_A           42 NRLQGKVAFITGA---ARGQGRTHAVRLAQDG----ADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQA  114 (317)
T ss_dssp             CTTTTCEEEESSC---SSHHHHHHHHHHHHTT----CEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             hccCCCEEEEeCC---CcHHHHHHHHHHHHCC----CeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEEC
Confidence            3578888888772   2221112445555543    5677766542100                   011246788999


Q ss_pred             eCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304         112 DLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus       112 Dv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      |+.|+++++++++       +.|++||+||...
T Consensus       115 Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~  147 (317)
T 3oec_A          115 DVRDLASLQAVVDEALAEFGHIDILVSNVGISN  147 (317)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999987       6899999999653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=94.37  E-value=0.026  Score=46.00  Aligned_cols=78  Identities=15%  Similarity=0.172  Sum_probs=49.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccc---ccc-------cCCCCCCEEEEeCCCHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDC---LYR-------ENLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~---lg~-------~~~~~v~~v~vDv~D~~sL~a  121 (184)
                      .++||+.-|.|-   ++|    |-.++|+..-..-.++.+.+|...   ...       ....++.++++|+.|++++++
T Consensus         8 ~l~~k~vlVTGa---s~G----IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   80 (262)
T 3ksu_A            8 DLKNKVIVIAGG---IKN----LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAK   80 (262)
T ss_dssp             CCTTCEEEEETC---SSH----HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHH
T ss_pred             CCCCCEEEEECC---Cch----HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            467777777662   223    445555321111167777654321   100       012457889999999999999


Q ss_pred             Hhh-------cCcEEEeccccc
Q psy1304         122 MAK-------KCRVILNCVGPY  136 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGPf  136 (184)
                      +++       +.|++||++|..
T Consensus        81 ~~~~~~~~~g~iD~lvnnAg~~  102 (262)
T 3ksu_A           81 LFDFAEKEFGKVDIAINTVGKV  102 (262)
T ss_dssp             HHHHHHHHHCSEEEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            987       679999999954

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=94.36  E-value=0.015  Score=47.17  Aligned_cols=78  Identities=17%  Similarity=0.072  Sum_probs=49.2

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc-cccc-------cCCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD-CLYR-------ENLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~-~lg~-------~~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .++||+.-|.|-   ++|----++.+|++..    .++.+..++. +...       ....++.++++|+.|++++++++
T Consensus         5 ~l~~k~vlVTGa---s~GIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   77 (259)
T 3edm_A            5 RFTNRTIVVAGA---GRDIGRACAIRFAQEG----ANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAI   77 (259)
T ss_dssp             TTTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECC---CchHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            466777666652   1220111555566553    5677764332 2110       11256889999999999999998


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|++||++|.+
T Consensus        78 ~~~~~~~g~id~lv~nAg~~   97 (259)
T 3edm_A           78 SAAADKFGEIHGLVHVAGGL   97 (259)
T ss_dssp             HHHHHHHCSEEEEEECCCCC
T ss_pred             HHHHHHhCCCCEEEECCCcc
Confidence            7       679999999844

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=94.31  E-value=0.032  Score=46.90  Aligned_cols=53  Identities=11%  Similarity=-0.022  Sum_probs=43.3

Q ss_pred             CCEEEEeC-CCHHHHHHHhhcCcEEEecccccccc------------chHHHHHHHHcCC--CEeeCC
Q psy1304         106 IPIIIADL-KNESSILIMAKKCRVILNCVGPYTWY------------GEAVVKACIEAKT--HHVDIT  158 (184)
Q Consensus       106 v~~v~vDv-~D~~sL~a~l~~~dVVIN~aGPf~~~------------g~~VaeACieAGt--hYVDlt  158 (184)
                      .+++.+|. .|++++.++++++|+||||+|+....            ...++++|.++|+  ++|-++
T Consensus        26 ~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S   93 (369)
T 3st7_A           26 HHIFEVHRQTKEEELESALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSS   93 (369)
T ss_dssp             CEEEECCTTCCHHHHHHHHHHCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEE
T ss_pred             CEEEEECCCCCHHHHHHHhccCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence            47888999 99999999999999999999975321            1679999999995  466554

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=94.30  E-value=0.019  Score=45.88  Aligned_cols=59  Identities=12%  Similarity=0.085  Sum_probs=40.1

Q ss_pred             hhhhhhhCCCCCcee-EEeeeeccccc--c----c-CCCCCCEEEEeCCCH-HHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTR-LGLLGARDCLY--R----E-NLIDIPIIIADLKNE-SSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~-iaLAGrr~~lg--~----~-~~~~v~~v~vDv~D~-~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .+ +.+.+|+....  .    . ...++.++.+|+.|+ ++++++++       +.|+|||++|..
T Consensus        21 ~a~~l~~~G----~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~   95 (254)
T 1sby_A           21 TSRELVKRN----LKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL   95 (254)
T ss_dssp             HHHHHHHTC----CSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            555666543    43 77777764210  0    0 013577899999998 88888877       789999999964

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=94.22  E-value=0.037  Score=45.21  Aligned_cols=78  Identities=17%  Similarity=0.138  Sum_probs=50.6

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-c-------cCCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-R-------ENLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-~-------~~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .++||+.-|.|-   ++|----++.+|++.  +  .++.+.+|+.... .       ....++.++.+|+.|++++.+++
T Consensus        26 ~~~~k~vlVTGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   98 (283)
T 1g0o_A           26 SLEGKVALVTGA---GRGIGREMAMELGRR--G--CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMF   98 (283)
T ss_dssp             CCTTCEEEETTT---TSHHHHHHHHHHHHT--T--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHH
Confidence            467787777662   122111245555554  3  6787877764311 0       01246788999999999998887


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|+|||++|..
T Consensus        99 ~~~~~~~g~iD~lv~~Ag~~  118 (283)
T 1g0o_A           99 EEAVKIFGKLDIVCSNSGVV  118 (283)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            6       589999999965

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=94.21  E-value=0.019  Score=46.17  Aligned_cols=79  Identities=11%  Similarity=0.155  Sum_probs=47.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCC-CCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHHH
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAP-TSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~-~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      ++||+.-|.|-   ++|--.-++.+|++.+ .+  .++.+.+|+.+...+         ...++.++.+|+.|+++++++
T Consensus         4 l~~k~~lVTGa---s~gIG~~ia~~l~~~~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~   78 (259)
T 1oaa_A            4 LGCAVCVLTGA---SRGFGRALAPQLARLLSPG--SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRL   78 (259)
T ss_dssp             CBSEEEEESSC---SSHHHHHHHHHHHTTBCTT--CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHH
T ss_pred             CCCcEEEEeCC---CChHHHHHHHHHHHhhcCC--CeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHH
Confidence            45666655551   1220001444444421 45  788888886532111         023577899999999999888


Q ss_pred             hhc---------Cc--EEEeccccc
Q psy1304         123 AKK---------CR--VILNCVGPY  136 (184)
Q Consensus       123 l~~---------~d--VVIN~aGPf  136 (184)
                      ++.         .|  +|||++|.+
T Consensus        79 ~~~~~~~~~~g~~d~~~lvnnAg~~  103 (259)
T 1oaa_A           79 LSAVRELPRPEGLQRLLLINNAATL  103 (259)
T ss_dssp             HHHHHHSCCCTTCCEEEEEECCCCC
T ss_pred             HHHHHhccccccCCccEEEECCccc
Confidence            753         47  999999853

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=94.12  E-value=0.047  Score=44.75  Aligned_cols=79  Identities=14%  Similarity=0.118  Sum_probs=49.4

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc-cccc--------cCCCCCCEEEEeCCC----HH
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD-CLYR--------ENLIDIPIIIADLKN----ES  117 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~-~lg~--------~~~~~v~~v~vDv~D----~~  117 (184)
                      ..++||+.-|.|-   ++|----++.+|++.  +  .++.+.+|+. +...        ....++.++.+|+.|    ++
T Consensus        19 ~~l~~k~~lVTGa---s~gIG~aia~~L~~~--G--~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~   91 (288)
T 2x9g_A           19 SHMEAPAAVVTGA---AKRIGRAIAVKLHQT--G--YRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPA   91 (288)
T ss_dssp             ---CCCEEEETTC---SSHHHHHHHHHHHHH--T--CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHH
T ss_pred             cCCCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHH
Confidence            3467777766651   122011144555544  3  6788888875 3211        112467889999999    99


Q ss_pred             HHHHHhh-------cCcEEEeccccc
Q psy1304         118 SILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       118 sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      +++++++       +.|+|||+||..
T Consensus        92 ~v~~~~~~~~~~~g~iD~lvnnAG~~  117 (288)
T 2x9g_A           92 SCEEIINSCFRAFGRCDVLVNNASAF  117 (288)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            9998887       689999999943

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=94.02  E-value=0.044  Score=45.35  Aligned_cols=88  Identities=8%  Similarity=-0.027  Sum_probs=56.5

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSI  119 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL  119 (184)
                      .|.+.++|-|+-                ++.+|++..    -+|.+..|+......      ...+++++.+|+.|+   
T Consensus        31 lVtGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---   87 (343)
T 2b69_A           31 LITGGAGFVGSH----------------LTDKLMMDG----HEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP---   87 (343)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHTT----CEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC---
T ss_pred             EEEcCccHHHHH----------------HHHHHHHCC----CEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh---
Confidence            346667777776                667777653    345555553211000      124578888998875   


Q ss_pred             HHHhhcCcEEEecccccccc----------------chHHHHHHHHcCCCEeeCC
Q psy1304         120 LIMAKKCRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDIT  158 (184)
Q Consensus       120 ~a~l~~~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDlt  158 (184)
                        .+.++|+||||+|+....                -..++++|.+.|+++|-++
T Consensus        88 --~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  140 (343)
T 2b69_A           88 --LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAS  140 (343)
T ss_dssp             --CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             --hhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEEC
Confidence              357899999999975421                1578999999998765543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=94.00  E-value=0.016  Score=48.61  Aligned_cols=78  Identities=12%  Similarity=0.098  Sum_probs=52.3

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ..+||+.-|.|   -++|----++..||+.  +  .++++.+|+++...+       .-.+..++++|+.|+++++++++
T Consensus         4 sL~gKvalVTG---as~GIG~aiA~~la~~--G--a~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~   76 (254)
T 4fn4_A            4 SLKNKVVIVTG---AGSGIGRAIAKKFALN--D--SIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVR   76 (254)
T ss_dssp             GGTTCEEEEET---TTSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeC---CCCHHHHHHHHHHHHc--C--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            35788877776   2233111144445544  3  789999987642211       12567889999999999999876


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             +.|++||+||-+
T Consensus        77 ~~~~~~G~iDiLVNNAGi~   95 (254)
T 4fn4_A           77 RTFETYSRIDVLCNNAGIM   95 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCccc
Confidence                   479999999843

>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}

Probab=93.91  E-value=0.039  Score=46.74  Aligned_cols=96  Identities=9%  Similarity=0.013  Sum_probs=58.2

Q ss_pred             hhhhhhhCCCCCceeEE-eeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccchHHHHHHHHcCC
Q psy1304          74 PSAYKADAPTSNLTRLG-LLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKT  152 (184)
Q Consensus        74 ~~~~La~~~~~~~~~ia-LAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGt  152 (184)
                      .+..|.+ .|+  +++. +.+++.+....  ..+++  -+.++   +.+. .++|+|+.|.+|...  ..++..|+++|.
T Consensus        24 ~~~~l~~-~~~--~elvav~d~~~~~~~~--~g~~~--~~~~~---l~~~-~~~DvViiatp~~~h--~~~~~~al~aG~   90 (304)
T 3bio_A           24 ALQALRE-APD--FEIAGIVRRNPAEVPF--ELQPF--RVVSD---IEQL-ESVDVALVCSPSREV--ERTALEILKKGI   90 (304)
T ss_dssp             HHHHHHH-CTT--EEEEEEECC---------CCTTS--CEESS---GGGS-SSCCEEEECSCHHHH--HHHHHHHHTTTC
T ss_pred             HHHHHhc-CCC--CEEEEEEcCCHHHHHH--cCCCc--CCHHH---HHhC-CCCCEEEECCCchhh--HHHHHHHHHcCC
Confidence            3344444 466  7764 66665443221  12221  12223   3333 789999999977655  488889999999


Q ss_pred             CEeeCCCC-hHHHHHHHHHhHHHHHHcCCeee
Q psy1304         153 HHVDITGE-PYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       153 hYVDltGE-~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      |.+|..-- .....+. .++.+.|+++|+.++
T Consensus        91 ~Vi~ekP~~a~~~~~~-~~l~~~a~~~g~~~~  121 (304)
T 3bio_A           91 CTADSFDIHDGILALR-RSLGDAAGKSGAAAV  121 (304)
T ss_dssp             EEEECCCCGGGHHHHH-HHHHHHHHHHTCEEE
T ss_pred             eEEECCCCCCCCHHHH-HHHHHHHHhCCCEEE
Confidence            99986442 3445555 688899999997643

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=93.89  E-value=0.014  Score=45.76  Aligned_cols=65  Identities=12%  Similarity=0.008  Sum_probs=47.2

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      |-+.++|=|+-                ++.+|++..    .++.+.+|+.....   .   .+.+|+.|+++++++++  
T Consensus         6 VtGasg~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~---~---~~~~D~~~~~~~~~~~~~~   59 (255)
T 2dkn_A            6 ITGSASGIGAA----------------LKELLARAG----HTVIGIDRGQADIE---A---DLSTPGGRETAVAAVLDRC   59 (255)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEESSSSSEE---C---CTTSHHHHHHHHHHHHHHH
T ss_pred             EeCCCcHHHHH----------------HHHHHHhCC----CEEEEEeCChhHcc---c---cccCCcccHHHHHHHHHHc
Confidence            44556676766                777787653    56777777654332   1   15689999999999997  


Q ss_pred             --cCcEEEecccccc
Q psy1304         125 --KCRVILNCVGPYT  137 (184)
Q Consensus       125 --~~dVVIN~aGPf~  137 (184)
                        +.|+|||++|...
T Consensus        60 ~~~~d~vi~~Ag~~~   74 (255)
T 2dkn_A           60 GGVLDGLVCCAGVGV   74 (255)
T ss_dssp             TTCCSEEEECCCCCT
T ss_pred             CCCccEEEECCCCCC
Confidence              8999999999764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=93.89  E-value=0.019  Score=47.28  Aligned_cols=80  Identities=20%  Similarity=0.206  Sum_probs=51.4

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ..++||+.-|.|-   ++|--.-++..|++.  +  .++.+.+|++.+..      ....++.++++|+.|+++++++.+
T Consensus        27 ~~l~gk~~lVTGa---s~GIG~aia~~la~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   99 (273)
T 3uf0_A           27 FSLAGRTAVVTGA---GSGIGRAIAHGYARA--G--AHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAE   99 (273)
T ss_dssp             TCCTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            3477888777762   222011144555544  3  67888876542211      112467899999999999988865


Q ss_pred             ------cCcEEEecccccc
Q psy1304         125 ------KCRVILNCVGPYT  137 (184)
Q Consensus       125 ------~~dVVIN~aGPf~  137 (184)
                            +.|+|||+||...
T Consensus       100 ~~~~~g~iD~lv~nAg~~~  118 (273)
T 3uf0_A          100 ELAATRRVDVLVNNAGIIA  118 (273)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHhcCCCcEEEECCCCCC
Confidence                  6899999999653

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=93.84  E-value=0.015  Score=48.43  Aligned_cols=80  Identities=14%  Similarity=0.136  Sum_probs=51.7

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCC-CCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAP-TSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~-~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a  121 (184)
                      .++||+.-|.|-   ++|----++..|++.. .+  .++.+.+|+.+...+         ...++.++++|+.|++++++
T Consensus        30 ~l~~k~~lVTGa---s~GIG~aia~~l~~~G~~~--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~  104 (287)
T 3rku_A           30 RLAKKTVLITGA---SAGIGKATALEYLEASNGD--MKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKP  104 (287)
T ss_dssp             HHTTCEEEEEST---TSHHHHHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHH
T ss_pred             hcCCCEEEEecC---CChHHHHHHHHHHHcCCCC--ceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHH
Confidence            366777766662   1220111445555433 33  588888887542211         12457789999999999999


Q ss_pred             Hhh-------cCcEEEeccccc
Q psy1304         122 MAK-------KCRVILNCVGPY  136 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGPf  136 (184)
                      +++       +.|+|||+||..
T Consensus       105 ~~~~~~~~~g~iD~lVnnAG~~  126 (287)
T 3rku_A          105 FIENLPQEFKDIDILVNNAGKA  126 (287)
T ss_dssp             HHHTSCGGGCSCCEEEECCCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCcC
Confidence            998       479999999954

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=93.81  E-value=0.056  Score=42.51  Aligned_cols=37  Identities=16%  Similarity=0.261  Sum_probs=31.4

Q ss_pred             eeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh---cCcEEEeccccc
Q psy1304          87 TRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK---KCRVILNCVGPY  136 (184)
Q Consensus        87 ~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~---~~dVVIN~aGPf  136 (184)
                      .++.+.+|+..             +|+.|+++++++++   +.|++||++|.+
T Consensus        31 ~~V~~~~r~~~-------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A           31 TIVHVASRQTG-------------LDISDEKSVYHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             EEEEEESGGGT-------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEecCCcc-------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            78888877654             79999999999987   579999999965

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=93.76  E-value=0.028  Score=47.01  Aligned_cols=78  Identities=9%  Similarity=0.019  Sum_probs=53.2

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      .++||+.-|.|   -++|----++..|++..    .++.+.+|+++...      ....+..++.+|+.|+++++++++ 
T Consensus         4 ~L~gKvalVTG---as~GIG~aia~~la~~G----a~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~   76 (258)
T 4gkb_A            4 NLQDKVVIVTG---GASGIGGAISMRLAEER----AIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQ   76 (258)
T ss_dssp             CCTTCEEEEET---TTSHHHHHHHHHHHHTT----CEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeC---CCCHHHHHHHHHHHHcC----CEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHH
Confidence            47888888876   22331111445555543    78888888764321      112578899999999999988876 


Q ss_pred             ------cCcEEEeccccc
Q psy1304         125 ------KCRVILNCVGPY  136 (184)
Q Consensus       125 ------~~dVVIN~aGPf  136 (184)
                            +.|++||+||-.
T Consensus        77 ~~~~~G~iDiLVNnAGi~   94 (258)
T 4gkb_A           77 TIATFGRLDGLVNNAGVN   94 (258)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHhCCCCEEEECCCCC
Confidence                  479999999954

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=93.72  E-value=0.027  Score=47.26  Aligned_cols=79  Identities=11%  Similarity=0.019  Sum_probs=51.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeec----------cccc-------ccCCCCCCEEEEeCC
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGAR----------DCLY-------RENLIDIPIIIADLK  114 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr----------~~lg-------~~~~~~v~~v~vDv~  114 (184)
                      .++||+.-|.|-   ++|----++..|++.  +  .++.+.+|+          .+..       .....++.++.+|+.
T Consensus        24 ~l~gk~vlVTGa---s~GIG~aia~~la~~--G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   96 (322)
T 3qlj_A           24 VVDGRVVIVTGA---GGGIGRAHALAFAAE--G--ARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVA   96 (322)
T ss_dssp             TTTTCEEEETTT---TSHHHHHHHHHHHHT--T--CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTT
T ss_pred             ccCCCEEEEECC---CcHHHHHHHHHHHHC--C--CEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCC
Confidence            477888777762   122111145555554  3  678887765          1100       001145678899999


Q ss_pred             CHHHHHHHhh-------cCcEEEecccccc
Q psy1304         115 NESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus       115 D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      |++++.++++       +.|+|||+||.+.
T Consensus        97 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~  126 (322)
T 3qlj_A           97 DWDQAAGLIQTAVETFGGLDVLVNNAGIVR  126 (322)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEECCCCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            9999999988       6899999999653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=93.70  E-value=0.042  Score=44.45  Aligned_cols=60  Identities=10%  Similarity=-0.050  Sum_probs=41.3

Q ss_pred             hhhhhhhCCCCCceeEEeee-ecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLG-ARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAG-rr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      ++.+|++..    .++.+.. |+.....       ....++.++.+|+.|+++++++++       +.|+|||++|...
T Consensus        42 la~~l~~~G----~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~  116 (267)
T 4iiu_A           42 IARQLAADG----FNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIAR  116 (267)
T ss_dssp             HHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCC
Confidence            666666654    4554433 4322111       122568899999999999999987       7899999999653

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=93.64  E-value=0.042  Score=44.26  Aligned_cols=57  Identities=14%  Similarity=0.026  Sum_probs=39.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhhc--------CcEEEeccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAKK--------CRVILNCVG  134 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~~--------~dVVIN~aG  134 (184)
                      ++.+|++.  +  .++.+.+|+.+...+       ...++.++.+|+.|+++++++++.        .|++||++|
T Consensus        21 ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg   92 (260)
T 2qq5_A           21 IALQLCKA--G--ATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAY   92 (260)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCc
Confidence            55666655  3  678888876532211       013577899999999999888754        499999994

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=93.63  E-value=0.031  Score=45.30  Aligned_cols=60  Identities=20%  Similarity=0.119  Sum_probs=41.2

Q ss_pred             hhhhhhhCCCCCceeEEee-eecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLL-GARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLA-Grr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      ++..|++..    .++.+. +|+++...       ....++.++.+|+.|+++++++++       +.|+|||+||...
T Consensus        42 ~a~~l~~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~  116 (272)
T 4e3z_A           42 VCRLAARQG----WRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVD  116 (272)
T ss_dssp             HHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHCC----CEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence            666666654    456555 34332111       112567899999999999999987       5799999999653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=93.62  E-value=0.052  Score=44.33  Aligned_cols=76  Identities=7%  Similarity=0.070  Sum_probs=48.0

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ++||+.-|.|-   .+|--.-++.+|++.  +  .++.+.+|+.+...+        ...++.++.+|+.|+++++++++
T Consensus        26 ~~~k~vlITGa---sggIG~~la~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~   98 (286)
T 1xu9_A           26 LQGKKVIVTGA---SKGIGREMAYHLAKM--G--AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA   98 (286)
T ss_dssp             GTTCEEEESSC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH
Confidence            56676666651   111001144555544  3  678888886542211        11257889999999999998887


Q ss_pred             -------cCcEEEec-ccc
Q psy1304         125 -------KCRVILNC-VGP  135 (184)
Q Consensus       125 -------~~dVVIN~-aGP  135 (184)
                             +.|+|||+ +|.
T Consensus        99 ~~~~~~g~iD~li~naag~  117 (286)
T 1xu9_A           99 QAGKLMGGLDMLILNHITN  117 (286)
T ss_dssp             HHHHHHTSCSEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCccC
Confidence                   68999999 564

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=93.61  E-value=0.017  Score=45.97  Aligned_cols=54  Identities=15%  Similarity=0.138  Sum_probs=40.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC----cEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC----RVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~----dVVIN~aGPf~  137 (184)
                      ++.+|++..    .++.+.+|+......     . +.+|+.|++++++++++.    |+|||++|...
T Consensus        17 ~a~~l~~~G----~~V~~~~r~~~~~~~-----~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A           17 TRKVLEAAG----HQIVGIDIRDAEVIA-----D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             HHHHHHHTT----CEEEEEESSSSSEEC-----C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred             HHHHHHHCC----CEEEEEeCCchhhcc-----c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence            667777653    577788887654321     1 668999999999999766    99999999764

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=93.57  E-value=0.045  Score=45.72  Aligned_cols=59  Identities=7%  Similarity=0.027  Sum_probs=43.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc---cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR---ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~---~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++..    .++++.+|+++...   ....+..++++|+.|+++++++++       +.|++||+||-+
T Consensus        18 ia~~la~~G----a~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~   86 (247)
T 3ged_A           18 ICLDFLEAG----DKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRG   86 (247)
T ss_dssp             HHHHHHHTT----CEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            555666554    78899988764322   123567889999999999998876       579999999754

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=93.54  E-value=0.053  Score=49.51  Aligned_cols=61  Identities=13%  Similarity=0.110  Sum_probs=42.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc----------ccCCCCCCEEEEeCCCHHHHHHHhhc--CcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY----------RENLIDIPIIIADLKNESSILIMAKK--CRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg----------~~~~~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~  137 (184)
                      ++.+|++..-   -++.+.+|+....          .....++.++.+|+.|++++.+++++  .|+|||++|...
T Consensus       275 lA~~La~~G~---~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~AGv~~  347 (511)
T 2z5l_A          275 LARRLAAEGA---ERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVFHTAGILD  347 (511)
T ss_dssp             HHHHHHHTTC---SEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHhCCC---cEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEEECCcccC
Confidence            4555654432   1588888865311          00114578899999999999999987  999999999653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=93.45  E-value=0.06  Score=43.32  Aligned_cols=53  Identities=11%  Similarity=-0.024  Sum_probs=39.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC-------cEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC-------RVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~-------dVVIN~aGP  135 (184)
                      ++.+|++.  +  .++.+.+|+.....     -..+.+|+.|+++++++++..       |+|||++|.
T Consensus        38 la~~l~~~--G--~~V~~~~r~~~~~~-----~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~   97 (251)
T 3orf_A           38 VVKFFKSK--S--WNTISIDFRENPNA-----DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGG   97 (251)
T ss_dssp             HHHHHHHT--T--CEEEEEESSCCTTS-----SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCccccc-----ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            55555554  3  67888888765432     246788999999999998764       999999994

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=93.36  E-value=0.03  Score=45.69  Aligned_cols=79  Identities=10%  Similarity=0.087  Sum_probs=50.0

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc-------------ccc-------ccCCCCCCEEEE
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD-------------CLY-------RENLIDIPIIIA  111 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~-------------~lg-------~~~~~~v~~v~v  111 (184)
                      .++||+.-|.|-   ++|--.-++..|++..    .++.+.+|+.             +..       .....++.++++
T Consensus         8 ~l~~k~~lVTGa---s~GIG~a~a~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (277)
T 3tsc_A            8 KLEGRVAFITGA---ARGQGRAHAVRMAAEG----ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVV   80 (277)
T ss_dssp             TTTTCEEEEEST---TSHHHHHHHHHHHHTT----CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             ccCCCEEEEECC---ccHHHHHHHHHHHHcC----CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEC
Confidence            467777777662   1220111455555543    6777777631             100       011256788999


Q ss_pred             eCCCHHHHHHHhhc-------CcEEEecccccc
Q psy1304         112 DLKNESSILIMAKK-------CRVILNCVGPYT  137 (184)
Q Consensus       112 Dv~D~~sL~a~l~~-------~dVVIN~aGPf~  137 (184)
                      |+.|+++++++++.       .|++||+||...
T Consensus        81 D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~  113 (277)
T 3tsc_A           81 DTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA  113 (277)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            99999999999874       899999999653

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=93.27  E-value=0.05  Score=45.62  Aligned_cols=59  Identities=12%  Similarity=0.118  Sum_probs=41.0

Q ss_pred             HHHHhh-cCcEEEeccccccccchHHHHHHHHcCCCEe-eCCCChHHHHHHHHHhHHHHHHc-CCee
Q psy1304         119 ILIMAK-KCRVILNCVGPYTWYGEAVVKACIEAKTHHV-DITGEPYFMEYMQYEYNTRAQES-EVQK  182 (184)
Q Consensus       119 L~a~l~-~~dVVIN~aGPf~~~g~~VaeACieAGthYV-DltGE~~~~~~ii~~lhe~Akaa-GV~I  182 (184)
                      +++++. ++|+||++..|-..  ...++.|+++|+|.| =.+|-.+   +...++.+.|+++ ++.+
T Consensus        38 l~~~~~~~~DvvIDfT~p~a~--~~~~~~a~~~g~~~VigTTG~~~---e~~~~l~~aa~~~~~~~v   99 (245)
T 1p9l_A           38 LSLLTDGNTEVVIDFTHPDVV--MGNLEFLIDNGIHAVVGTTGFTA---ERFQQVESWLVAKPNTSV   99 (245)
T ss_dssp             THHHHHTTCCEEEECSCTTTH--HHHHHHHHHTTCEEEECCCCCCH---HHHHHHHHHHHTSTTCEE
T ss_pred             HHHHhccCCcEEEEccChHHH--HHHHHHHHHcCCCEEEcCCCCCH---HHHHHHHHHHHhCCCCCE
Confidence            445554 89999999988643  688999999999954 3555322   2225677777765 6654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=93.22  E-value=0.061  Score=42.85  Aligned_cols=59  Identities=10%  Similarity=-0.126  Sum_probs=41.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeecc-cccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARD-CLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~-~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++.+..++. ....       ....++.++++|+.|.++++++++       +.|+|||+||..
T Consensus        29 ia~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~  102 (256)
T 3ezl_A           29 ICQRLHKDG----FRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT  102 (256)
T ss_dssp             HHHHHHHTT----EEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            566666653    6677766332 1110       112568899999999999999987       579999999954

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=93.21  E-value=0.049  Score=44.62  Aligned_cols=76  Identities=14%  Similarity=0.117  Sum_probs=49.1

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh------
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK------  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~------  124 (184)
                      ..++||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+.....    ......+|+.|.+++.++++      
T Consensus        24 ~~l~gk~vlVTGa---s~gIG~aia~~la~~--G--~~V~~~~r~~~~~~----~~~~~~~Dv~~~~~~~~~~~~~~~~~   92 (266)
T 3uxy_A           24 QGFEGKVALVTGA---AGGIGGAVVTALRAA--G--ARVAVADRAVAGIA----ADLHLPGDLREAAYADGLPGAVAAGL   92 (266)
T ss_dssp             --CTTCEEEESST---TSHHHHHHHHHHHHT--T--CEEEECSSCCTTSC----CSEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCHHHHH----hhhccCcCCCCHHHHHHHHHHHHHhc
Confidence            4577888777762   122011145555554  3  67888888765432    22445789999999988876      


Q ss_pred             -cCcEEEecccccc
Q psy1304         125 -KCRVILNCVGPYT  137 (184)
Q Consensus       125 -~~dVVIN~aGPf~  137 (184)
                       +.|+|||+||...
T Consensus        93 g~iD~lvnnAg~~~  106 (266)
T 3uxy_A           93 GRLDIVVNNAGVIS  106 (266)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence             6899999999653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=93.11  E-value=0.056  Score=44.64  Aligned_cols=59  Identities=14%  Similarity=0.084  Sum_probs=42.2

Q ss_pred             hhhhhhhCCCCCceeEEeee-ecccccc--------cCCCCCCEEEEeCCCHH-----------------HHHHHhh---
Q psy1304          74 PSAYKADAPTSNLTRLGLLG-ARDCLYR--------ENLIDIPIIIADLKNES-----------------SILIMAK---  124 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAG-rr~~lg~--------~~~~~v~~v~vDv~D~~-----------------sL~a~l~---  124 (184)
                      ++.+|++..    .++.+.+ |+.+...        ....++.++++|+.|++                 ++.++++   
T Consensus        25 ia~~la~~G----~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  100 (291)
T 1e7w_A           25 IAEGLHAEG----YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACY  100 (291)
T ss_dssp             HHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCC----CeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHH
Confidence            556666553    6788888 7643211        11246788999999999                 9988887   


Q ss_pred             ----cCcEEEeccccc
Q psy1304         125 ----KCRVILNCVGPY  136 (184)
Q Consensus       125 ----~~dVVIN~aGPf  136 (184)
                          +.|++||+||..
T Consensus       101 ~~~g~iD~lvnnAg~~  116 (291)
T 1e7w_A          101 THWGRCDVLVNNASSF  116 (291)
T ss_dssp             HHHSCCCEEEECCCCC
T ss_pred             HhcCCCCEEEECCCCC
Confidence                689999999854

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=93.05  E-value=0.024  Score=46.15  Aligned_cols=77  Identities=12%  Similarity=0.087  Sum_probs=50.4

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      ..++||+.-|-|-   .+|----++.+|++.  +  .++.+.+|+.+...+    ...++.++++|+.|+++++++++  
T Consensus        26 ~~l~~k~vlVTGa---s~GIG~aia~~l~~~--G--~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           26 KQFEGASAIVSGG---AGGLGEATVRRLHAD--G--LGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             GGGTTEEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             hccCCCEEEEECC---CChHHHHHHHHHHHC--C--CEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            3467777777662   122001145555554  3  678888887643221    11468899999999999999987  


Q ss_pred             ----cCcEEEeccc
Q psy1304         125 ----KCRVILNCVG  134 (184)
Q Consensus       125 ----~~dVVIN~aG  134 (184)
                          +.|++||+++
T Consensus        99 ~~~~~id~lv~~aa  112 (281)
T 3ppi_A           99 NQLGRLRYAVVAHG  112 (281)
T ss_dssp             TTSSEEEEEEECCC
T ss_pred             HHhCCCCeEEEccC
Confidence                5799999933

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=93.04  E-value=0.047  Score=45.26  Aligned_cols=80  Identities=13%  Similarity=0.031  Sum_probs=51.6

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc--c-------ccCCCCCCEEEEeCCCHHHHH
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL--Y-------RENLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l--g-------~~~~~~v~~v~vDv~D~~sL~  120 (184)
                      +..++||+.-|.|-   ++|----++..|++..    .++.+.+|++..  .       .....++.++++|+.|+++++
T Consensus        44 ~~~l~~k~vlVTGa---s~GIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  116 (294)
T 3r3s_A           44 SGRLKDRKALVTGG---DSGIGRAAAIAYAREG----ADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFAR  116 (294)
T ss_dssp             CSTTTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHH
T ss_pred             ccCCCCCEEEEeCC---CcHHHHHHHHHHHHCC----CEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHH
Confidence            34578888888772   2231112444555543    567777765221  0       011256788899999999999


Q ss_pred             HHhh-------cCcEEEeccccc
Q psy1304         121 IMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       121 a~l~-------~~dVVIN~aGPf  136 (184)
                      ++++       +.|++||++|..
T Consensus       117 ~~~~~~~~~~g~iD~lv~nAg~~  139 (294)
T 3r3s_A          117 SLVHKAREALGGLDILALVAGKQ  139 (294)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCc
Confidence            8886       689999999954

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=92.99  E-value=0.0067  Score=51.58  Aligned_cols=115  Identities=10%  Similarity=-0.024  Sum_probs=64.1

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC---C-CCCCEEEEeCCCHHHHHHHhhcCcE
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN---L-IDIPIIIADLKNESSILIMAKKCRV  128 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~---~-~~v~~v~vDv~D~~sL~a~l~~~dV  128 (184)
                      ++|+++.|-|-=.-||.    ++.+|++...   -+|.+..|+.+...+.   . .... ..+   +.+++.+.++++|+
T Consensus       139 l~~~~vlVlGaGg~g~a----ia~~L~~~G~---~~V~v~nR~~~ka~~la~~~~~~~~-~~~---~~~~~~~~~~~aDi  207 (297)
T 2egg_A          139 LDGKRILVIGAGGGARG----IYFSLLSTAA---ERIDMANRTVEKAERLVREGDERRS-AYF---SLAEAETRLAEYDI  207 (297)
T ss_dssp             CTTCEEEEECCSHHHHH----HHHHHHTTTC---SEEEEECSSHHHHHHHHHHSCSSSC-CEE---CHHHHHHTGGGCSE
T ss_pred             CCCCEEEEECcHHHHHH----HHHHHHHCCC---CEEEEEeCCHHHHHHHHHHhhhccC-cee---eHHHHHhhhccCCE
Confidence            45666666552111222    3445555431   2788888865432211   1 1111 112   33567888999999


Q ss_pred             EEeccccccccc---hHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         129 ILNCVGPYTWYG---EAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       129 VIN~aGPf~~~g---~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ||||++.-....   .++-..++..|...+|++=.+..+     .+.+.|+++|+..+
T Consensus       208 vIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~T-----~ll~~A~~~G~~~v  260 (297)
T 2egg_A          208 IINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLET-----KWLKEAKARGARVQ  260 (297)
T ss_dssp             EEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSSC-----HHHHHHHHTTCEEE
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCCC-----HHHHHHHHCcCEEE
Confidence            999996443211   123345677888999997654322     24567888887654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=92.86  E-value=0.041  Score=43.73  Aligned_cols=57  Identities=11%  Similarity=0.045  Sum_probs=39.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++.  +  .++.+.+|+.+...+.. .+.++++|+.| ++++++++       +.|+|||++|..
T Consensus        18 ~a~~l~~~--G--~~V~~~~r~~~~~~~~~-~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~   81 (239)
T 2ekp_A           18 IAEALVAR--G--YRVAIASRNPEEAAQSL-GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVN   81 (239)
T ss_dssp             HHHHHHHT--T--CEEEEEESSCHHHHHHH-TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCC
T ss_pred             HHHHHHHC--C--CEEEEEeCCHHHHHHhh-CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            66667665  3  67888888754311111 27788999998 77776654       689999999854

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=92.83  E-value=0.043  Score=44.97  Aligned_cols=78  Identities=14%  Similarity=0.031  Sum_probs=46.6

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeee-cccccc-------cCCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGA-RDCLYR-------ENLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGr-r~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .++||+.-|.|-   ++|--.-++..|++..    .++.+..+ +.....       ....++.++++|+.|++++++++
T Consensus        24 ~~~~k~~lVTGa---s~GIG~aia~~la~~G----~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   96 (267)
T 3u5t_A           24 METNKVAIVTGA---SRGIGAAIAARLASDG----FTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLF   96 (267)
T ss_dssp             ---CCEEEEESC---SSHHHHHHHHHHHHHT----CEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            356676666651   1220111555555553    56666533 221111       11256788999999999999998


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|++||+||..
T Consensus        97 ~~~~~~~g~iD~lvnnAG~~  116 (267)
T 3u5t_A           97 ATAEEAFGGVDVLVNNAGIM  116 (267)
T ss_dssp             HHHHHHHSCEEEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            7       689999999854

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=92.68  E-value=0.068  Score=45.25  Aligned_cols=77  Identities=12%  Similarity=0.038  Sum_probs=48.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeee-ecccccc--------cCCCCCCEEEEeCCCHH------
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLG-ARDCLYR--------ENLIDIPIIIADLKNES------  117 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAG-rr~~lg~--------~~~~~v~~v~vDv~D~~------  117 (184)
                      ++||+.-|.|-   .+|----++..|++.  +  .++.+.+ |+.+...        ....++.++.+|+.|++      
T Consensus        44 l~~k~~lVTGa---s~GIG~aia~~La~~--G--~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~  116 (328)
T 2qhx_A           44 PTVPVALVTGA---AKRLGRSIAEGLHAE--G--YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSG  116 (328)
T ss_dssp             -CCCEEEETTC---SSHHHHHHHHHHHHT--T--CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC---
T ss_pred             cCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccc
Confidence            56777666651   122011145555554  3  6788888 6543211        11246788999999999      


Q ss_pred             -----------HHHHHhh-------cCcEEEeccccc
Q psy1304         118 -----------SILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       118 -----------sL~a~l~-------~~dVVIN~aGPf  136 (184)
                                 +++++++       +.|+|||+||..
T Consensus       117 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~  153 (328)
T 2qhx_A          117 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF  153 (328)
T ss_dssp             ----CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             cccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence                       8988887       689999999853

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=92.68  E-value=0.064  Score=42.39  Aligned_cols=78  Identities=17%  Similarity=0.177  Sum_probs=49.9

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeC--CCHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADL--KNESSILI  121 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv--~D~~sL~a  121 (184)
                      .++||+.-|.|-   .+|--.-++.+|++.  +  .++.+.+|+.....        ....+..++.+|+  .|.+++.+
T Consensus        11 ~l~~k~vlITGa---s~gIG~~ia~~l~~~--G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~   83 (247)
T 3i1j_A           11 LLKGRVILVTGA---ARGIGAAAARAYAAH--G--ASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRE   83 (247)
T ss_dssp             TTTTCEEEESST---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHH
T ss_pred             cCCCCEEEEeCC---CChHHHHHHHHHHHC--C--CEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHH
Confidence            467777777662   122011144555544  3  67888888653211        1114567888888  89999888


Q ss_pred             Hhh-------cCcEEEeccccc
Q psy1304         122 MAK-------KCRVILNCVGPY  136 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGPf  136 (184)
                      +++       +.|+|||++|.+
T Consensus        84 ~~~~~~~~~g~id~lv~nAg~~  105 (247)
T 3i1j_A           84 LAARVEHEFGRLDGLLHNASII  105 (247)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHHhCCCCCEEEECCccC
Confidence            876       689999999964

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=92.66  E-value=0.093  Score=44.39  Aligned_cols=32  Identities=13%  Similarity=0.247  Sum_probs=28.5

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhc-----CcEEEecccc
Q psy1304         104 IDIPIIIADLKNESSILIMAKK-----CRVILNCVGP  135 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~-----~dVVIN~aGP  135 (184)
                      .++.++.+|+.|+++++++++.     .|+|||++|.
T Consensus        57 ~~~~~~~~Dv~d~~~v~~~~~~~~~g~iD~lVnnAG~   93 (327)
T 1jtv_A           57 GSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGL   93 (327)
T ss_dssp             TSEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCC
T ss_pred             CceEEEEecCCCHHHHHHHHHHHhcCCCCEEEECCCc
Confidence            4578899999999999999986     8999999984

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=92.46  E-value=0.073  Score=48.07  Aligned_cols=60  Identities=8%  Similarity=0.035  Sum_probs=42.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccc----------ccCCCCCCEEEEeCCCHHHHHHHhhcC------cEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLY----------RENLIDIPIIIADLKNESSILIMAKKC------RVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg----------~~~~~~v~~v~vDv~D~~sL~a~l~~~------dVVIN~aGPf  136 (184)
                      ++.+|++..-   -++.+.+|+....          .....++.++.+|+.|++++.+++++.      |+|||++|..
T Consensus       242 la~~La~~G~---~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~VIh~AG~~  317 (486)
T 2fr1_A          242 IARWLARRGA---PHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATL  317 (486)
T ss_dssp             HHHHHHHHTC---SEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCC
T ss_pred             HHHHHHHcCC---CEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcEEEECCccC
Confidence            5566665431   2588888865311          001245788999999999999999987      9999999965

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=92.28  E-value=0.38  Score=40.17  Aligned_cols=62  Identities=13%  Similarity=0.156  Sum_probs=46.2

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  +.|+|+-|..|...  .+++.+|+++|.| |+.  ++-+.+=.+++ .++-++++++|+.++
T Consensus        67 ~~~ll~~~~iDaV~I~tP~~~H--~~~~~~al~aGkhVl~EKPla~t~~ea~~l-~~~~~~~~~~g~~~~  133 (390)
T 4h3v_A           67 WRTLLERDDVQLVDVCTPGDSH--AEIAIAALEAGKHVLCEKPLANTVAEAEAM-AAAAAKAAAGGIRSM  133 (390)
T ss_dssp             HHHHTTCTTCSEEEECSCGGGH--HHHHHHHHHTTCEEEEESSSCSSHHHHHHH-HHHHHHHHHTTCCEE
T ss_pred             HHHHhcCCCCCEEEEeCChHHH--HHHHHHHHHcCCCceeecCcccchhHHHHH-HHHHHHHHhcCCceE
Confidence            566775  48999999866555  4899999999999 776  55555545555 466778888988764

>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*

Probab=92.16  E-value=0.19  Score=42.80  Aligned_cols=59  Identities=15%  Similarity=0.051  Sum_probs=42.1

Q ss_pred             HHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcC
Q psy1304         119 ILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESE  179 (184)
Q Consensus       119 L~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaG  179 (184)
                      +++++.++|+||.|.+|+..  ...+..|+++|.|.++-+--..-..++..++.+.|++.|
T Consensus        52 ~~~ll~~~DvViiatp~~~h--~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~  110 (320)
T 1f06_A           52 VDKHADDVDVLFLCMGSATD--IPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG  110 (320)
T ss_dssp             GGGTTTTCSEEEECSCTTTH--HHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred             HHHHhcCCCEEEEcCCcHHH--HHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence            34455889999999988764  477889999999998876432223333356777787766

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=92.10  E-value=0.051  Score=47.17  Aligned_cols=119  Identities=9%  Similarity=0.053  Sum_probs=64.9

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeec---ccccccCC------CCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGAR---DCLYRENL------IDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr---~~lg~~~~------~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ++||+.-|-|-=.-||.    ++.+|++....   +|.+..|+   .+...+..      ....+..++.++.+++.+.+
T Consensus       152 l~gk~~lVlGaGG~g~a----ia~~L~~~Ga~---~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l  224 (315)
T 3tnl_A          152 IIGKKMTICGAGGAATA----ICIQAALDGVK---EISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEI  224 (315)
T ss_dssp             CTTSEEEEECCSHHHHH----HHHHHHHTTCS---EEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH
T ss_pred             ccCCEEEEECCChHHHH----HHHHHHHCCCC---EEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhh
Confidence            56777777663111222    55666665422   78888887   33222111      12446677888888899999


Q ss_pred             hcCcEEEecccccccc---chHH-HHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         124 KKCRVILNCVGPYTWY---GEAV-VKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~---g~~V-aeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++|+||||..--...   ..++ -...+..+...+|+.=.+.-+     .|-.+|++.|..++
T Consensus       225 ~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T-----~ll~~A~~~G~~~~  283 (315)
T 3tnl_A          225 AESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKT-----RLLEIAEEQGCQTL  283 (315)
T ss_dssp             HTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSC-----HHHHHHHHTTCEEE
T ss_pred             cCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCC-----HHHHHHHHCCCeEe
Confidence            9999999997411110   1122 223344455556775433211     22234555665543

>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*

Probab=91.78  E-value=0.62  Score=40.15  Aligned_cols=64  Identities=14%  Similarity=0.106  Sum_probs=46.7

Q ss_pred             CHHHHHHHhhcCcEEEeccccc--cccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         115 NESSILIMAKKCRVILNCVGPY--TWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       115 D~~sL~a~l~~~dVVIN~aGPf--~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      |.+++-  -.+.|+||.|.++.  .......+..|+++|.|-|-.+ +.+..... .++.+.|+++|+.+
T Consensus        78 d~~~ll--~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtan-K~pla~~~-~eL~~~A~~~gv~~  143 (331)
T 3c8m_A           78 SASEAL--ARDFDIVVDATPASADGKKELAFYKETFENGKDVVTAN-KSGLANFW-PEIMEYARSNNRRI  143 (331)
T ss_dssp             CHHHHH--HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECC-CHHHHHHH-HHHHHHHHHHTCCE
T ss_pred             CHHHHh--CCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecC-chhhHHHH-HHHHHHHHHcCCEE
Confidence            444443  24789999999876  3344678999999999987653 44455554 78899999999764

>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}

Probab=91.42  E-value=0.38  Score=40.06  Aligned_cols=94  Identities=12%  Similarity=-0.007  Sum_probs=58.4

Q ss_pred             hhhhhhhCCCCCcee-EEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh--cCcEEEeccccccccchHHHHHHHHc
Q psy1304          74 PSAYKADAPTSNLTR-LGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK--KCRVILNCVGPYTWYGEAVVKACIEA  150 (184)
Q Consensus        74 ~~~~La~~~~~~~~~-iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieA  150 (184)
                      .+..|.+. |+  .+ +++..++.+........++  .  ..|   ++++++  ++|+|+.|..|...  ..++.+|+++
T Consensus        25 ~~~~l~~~-~~--~~~v~v~d~~~~~~~~~~~~~~--~--~~~---~~~~l~~~~~D~V~i~tp~~~h--~~~~~~al~~   92 (315)
T 3c1a_A           25 YIRTIAGL-PG--AALVRLASSNPDNLALVPPGCV--I--ESD---WRSVVSAPEVEAVIIATPPATH--AEITLAAIAS   92 (315)
T ss_dssp             HHHHHHHC-TT--EEEEEEEESCHHHHTTCCTTCE--E--ESS---THHHHTCTTCCEEEEESCGGGH--HHHHHHHHHT
T ss_pred             HHHHHHhC-CC--cEEEEEEeCCHHHHHHHHhhCc--c--cCC---HHHHhhCCCCCEEEEeCChHHH--HHHHHHHHHC
Confidence            55666654 45  55 4577766554332222211  1  223   456675  79999999976544  5888899999


Q ss_pred             CCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         151 KTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       151 Gth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      |.| +++  ++-+.   .+. .++.+.|+++|+.++
T Consensus        93 Gk~v~~eKP~~~~~---~~~-~~l~~~a~~~g~~~~  124 (315)
T 3c1a_A           93 GKAVLVEKPLTLDL---AEA-EAVAAAAKATGVMVW  124 (315)
T ss_dssp             TCEEEEESSSCSCH---HHH-HHHHHHHHHHCCCEE
T ss_pred             CCcEEEcCCCcCCH---HHH-HHHHHHHHHcCCEEE
Confidence            999 555  33333   333 467778888898764

>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*

Probab=91.40  E-value=0.39  Score=40.10  Aligned_cols=60  Identities=17%  Similarity=0.086  Sum_probs=44.1

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  +.|+|+.|..|...  ..++.+|+++|.| +++  ++-+.+   +. +++-+.|+++|+.++
T Consensus        56 ~~~ell~~~~vD~V~i~tp~~~H--~~~~~~al~aGkhVl~EKPla~~~~---ea-~~l~~~a~~~g~~~~  120 (294)
T 1lc0_A           56 SLEDALRSQEIDVAYICSESSSH--EDYIRQFLQAGKHVLVEYPMTLSFA---AA-QELWELAAQKGRVLH  120 (294)
T ss_dssp             CHHHHHHCSSEEEEEECSCGGGH--HHHHHHHHHTTCEEEEESCSCSCHH---HH-HHHHHHHHHTTCCEE
T ss_pred             CHHHHhcCCCCCEEEEeCCcHhH--HHHHHHHHHCCCcEEEeCCCCCCHH---HH-HHHHHHHHHhCCEEE
Confidence            4667776  68999999966544  5889999999999 776  333333   33 567778888998754

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=91.22  E-value=0.45  Score=39.37  Aligned_cols=59  Identities=20%  Similarity=0.191  Sum_probs=42.9

Q ss_pred             HHHHhhcCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++++|+|+-|..|...  ..++..|+++|.| +++  ++-+.+   +. .++.+.|+++|+.++
T Consensus        60 ~~~ll~~~D~V~i~tp~~~h--~~~~~~al~~gk~vl~EKP~~~~~~---~~-~~l~~~a~~~g~~~~  121 (308)
T 3uuw_A           60 IESLAKKCDCIFLHSSTETH--YEIIKILLNLGVHVYVDKPLASTVS---QG-EELIELSTKKNLNLM  121 (308)
T ss_dssp             HHHHHTTCSEEEECCCGGGH--HHHHHHHHHTTCEEEECSSSSSSHH---HH-HHHHHHHHHHTCCEE
T ss_pred             HHHHHhcCCEEEEeCCcHhH--HHHHHHHHHCCCcEEEcCCCCCCHH---HH-HHHHHHHHHcCCEEE
Confidence            55666699999999866644  5888899999999 554  444433   33 456778888887664

>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}

Probab=91.05  E-value=0.65  Score=39.55  Aligned_cols=88  Identities=15%  Similarity=0.088  Sum_probs=55.0

Q ss_pred             CCCCCceeE-EeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc--CcEEEeccccccccchHHHHHHHHcCCC-Eee
Q psy1304          81 APTSNLTRL-GLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK--CRVILNCVGPYTWYGEAVVKACIEAKTH-HVD  156 (184)
Q Consensus        81 ~~~~~~~~i-aLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~g~~VaeACieAGth-YVD  156 (184)
                      ..|+  ++| +++.++.+......+...  ..  .   +++++++.  .|+|+.|..|...  ..++.+|+++|.| +++
T Consensus        27 ~~~~--~~l~av~d~~~~~~~~~~~~~~--~~--~---~~~~ll~~~~vD~V~i~tp~~~H--~~~~~~al~aGkhVl~E   95 (362)
T 3fhl_A           27 TNPH--FELYKIVERSKELSKERYPQAS--IV--R---SFKELTEDPEIDLIVVNTPDNTH--YEYAGMALEAGKNVVVE   95 (362)
T ss_dssp             HCTT--EEEEEEECSSCCGGGTTCTTSE--EE--S---CSHHHHTCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEEE
T ss_pred             hCCC--eEEEEEEcCCHHHHHHhCCCCc--eE--C---CHHHHhcCCCCCEEEEeCChHHH--HHHHHHHHHCCCeEEEe
Confidence            3466  666 466665544221222222  11  2   35667766  8999999866544  5889999999999 665


Q ss_pred             --CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         157 --ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       157 --ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                        ++-+.+   +. +++-+.|+++|+.++
T Consensus        96 KP~a~~~~---ea-~~l~~~a~~~g~~~~  120 (362)
T 3fhl_A           96 KPFTSTTK---QG-EELIALAKKKGLMLS  120 (362)
T ss_dssp             SSCCSSHH---HH-HHHHHHHHHHTCCEE
T ss_pred             cCCCCCHH---HH-HHHHHHHHHcCCEEE
Confidence              433333   33 466778888888764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=91.04  E-value=0.096  Score=46.94  Aligned_cols=82  Identities=12%  Similarity=0.176  Sum_probs=53.5

Q ss_pred             ccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc--c--CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          49 ESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR--E--NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~--~--~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ...+++||+.-|.|--   +|----++.+|++.  +  .++.+.+|+.....  +  ......++.+|+.|+++++++++
T Consensus       207 ~~~~l~gk~~LVTGgs---gGIG~aiA~~La~~--G--a~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~  279 (454)
T 3u0b_A          207 WDKPLDGKVAVVTGAA---RGIGATIAEVFARD--G--ATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITA  279 (454)
T ss_dssp             TTSTTTTCEEEESSCS---SHHHHHHHHHHHHT--T--CEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHH
T ss_pred             cccCCCCCEEEEeCCc---hHHHHHHHHHHHHC--C--CEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHH
Confidence            3456788888777621   22112256666655  4  67888887542110  0  00245789999999999999886


Q ss_pred             --------cCcEEEecccccc
Q psy1304         125 --------KCRVILNCVGPYT  137 (184)
Q Consensus       125 --------~~dVVIN~aGPf~  137 (184)
                              ..|+|||++|-..
T Consensus       280 ~~~~~~g~~id~lV~nAGv~~  300 (454)
T 3u0b_A          280 HVTEHHGGKVDILVNNAGITR  300 (454)
T ss_dssp             HHHHHSTTCCSEEEECCCCCC
T ss_pred             HHHHHcCCCceEEEECCcccC
Confidence                    3899999999653

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=91.03  E-value=0.49  Score=39.30  Aligned_cols=59  Identities=14%  Similarity=0.013  Sum_probs=42.3

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  ++|+|+.|..|...  .+++..|+++|.| +++  ++.+.+   +. .++.+.|+++|+.++
T Consensus        54 ~~~~l~~~~~D~V~i~tp~~~h--~~~~~~al~~Gk~v~~ekP~~~~~~---~~-~~l~~~a~~~g~~~~  117 (332)
T 2glx_A           54 VEELVGDPDVDAVYVSTTNELH--REQTLAAIRAGKHVLCEKPLAMTLE---DA-REMVVAAREAGVVLG  117 (332)
T ss_dssp             HHHHHTCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEECSSSCSSHH---HH-HHHHHHHHHHTCCEE
T ss_pred             HHHHhcCCCCCEEEEeCChhHh--HHHHHHHHHCCCeEEEeCCCcCCHH---HH-HHHHHHHHHcCCEEE
Confidence            566776  59999999976654  5888899999999 565  333333   33 467778888887654

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=90.94  E-value=0.028  Score=47.55  Aligned_cols=59  Identities=14%  Similarity=0.053  Sum_probs=41.2

Q ss_pred             HHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEee-CCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         119 ILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVD-ITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       119 L~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVD-ltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      ++++++++|+||++..|-..  ...+++|+++|+|.|= .+|-.   .+...++.+.|++.++.+
T Consensus        66 l~~~l~~~DvVIDft~p~~~--~~~~~~a~~~G~~vVigTtG~~---~e~~~~L~~~a~~~~vv~  125 (273)
T 1dih_A           66 LDAVKDDFDVFIDFTRPEGT--LNHLAFCRQHGKGMVIGTTGFD---EAGKQAIRDAAADIAIVF  125 (273)
T ss_dssp             STTTTTSCSEEEECSCHHHH--HHHHHHHHHTTCEEEECCCCCC---HHHHHHHHHHTTTSCEEE
T ss_pred             HHHHhcCCCEEEEcCChHHH--HHHHHHHHhCCCCEEEECCCCC---HHHHHHHHHhcCCCCEEE
Confidence            44566799999999987743  6899999999999543 55432   222356777777766543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=90.82  E-value=0.021  Score=47.54  Aligned_cols=58  Identities=19%  Similarity=0.017  Sum_probs=37.7

Q ss_pred             HHHHhhcCcEEEeccccccccc--hHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAKKCRVILNCVGPYTWYG--EAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~~~dVVIN~aGPf~~~g--~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +.++++++|+||||+++.....  ..+-..++..|...+|++- .    .  ..+.+.|+++|+.++
T Consensus       180 ~~~~~~~aDiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~-~----~--t~ll~~a~~~g~~~v  239 (275)
T 2hk9_A          180 PEEVIDKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY-K----E--TKLLKKAKEKGAKLL  239 (275)
T ss_dssp             GGGTGGGCSEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS-S----C--CHHHHHHHHTTCEEE
T ss_pred             HHhhhcCCCEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC-C----h--HHHHHHHHHCcCEEE
Confidence            4557789999999997664311  2221245678899999976 1    1  234556777787655

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=90.75  E-value=0.076  Score=45.18  Aligned_cols=58  Identities=14%  Similarity=0.141  Sum_probs=41.2

Q ss_pred             HHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEee-CCCChHHHHHHHHHhHHHHHHcCC
Q psy1304         118 SILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVD-ITGEPYFMEYMQYEYNTRAQESEV  180 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVD-ltGE~~~~~~ii~~lhe~AkaaGV  180 (184)
                      +++++++++|+||++..|-..  ...++.|+++|+|.|= .+|   |..+...++.+.|++.++
T Consensus        66 dl~~ll~~~DVVIDfT~p~a~--~~~~~~al~~G~~vVigTTG---~s~~~~~~L~~aa~~~~v  124 (272)
T 4f3y_A           66 DIERVCAEADYLIDFTLPEGT--LVHLDAALRHDVKLVIGTTG---FSEPQKAQLRAAGEKIAL  124 (272)
T ss_dssp             CHHHHHHHCSEEEECSCHHHH--HHHHHHHHHHTCEEEECCCC---CCHHHHHHHHHHTTTSEE
T ss_pred             CHHHHhcCCCEEEEcCCHHHH--HHHHHHHHHcCCCEEEECCC---CCHHHHHHHHHHhccCCE
Confidence            466677899999999866533  5789999999999774 344   333333567777776554

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=90.73  E-value=0.73  Score=38.80  Aligned_cols=54  Identities=4%  Similarity=-0.037  Sum_probs=39.9

Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      .+.|+|+.|..|...  ..++.+|+++|.| +++  ++-+.   .+. +++-+.|+++|+.++
T Consensus        71 ~~vD~V~I~tP~~~H--~~~~~~al~aGkhVl~EKPla~~~---~ea-~~l~~~a~~~g~~~~  127 (312)
T 3o9z_A           71 EGVDYLSIASPNHLH--YPQIRMALRLGANALSEKPLVLWP---EEI-ARLKELEARTGRRVY  127 (312)
T ss_dssp             CCCSEEEECSCGGGH--HHHHHHHHHTTCEEEECSSSCSCH---HHH-HHHHHHHHHHCCCEE
T ss_pred             CCCcEEEECCCchhh--HHHHHHHHHCCCeEEEECCCCCCH---HHH-HHHHHHHHHcCCEEE
Confidence            579999999976655  5999999999999 555  33333   343 566778888898664

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=90.57  E-value=0.062  Score=45.63  Aligned_cols=100  Identities=10%  Similarity=-0.004  Sum_probs=54.5

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC-------CCCCEEEEeCCCHHHHHHHhh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL-------IDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~-------~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .++||+.-|-|-=.-||.    ++.+|++....   +|.+..|+.++..+..       ...++...+.   +++.+.++
T Consensus       124 ~l~~k~vlVlGaGG~g~a----ia~~L~~~G~~---~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~  193 (283)
T 3jyo_A          124 NAKLDSVVQVGAGGVGNA----VAYALVTHGVQ---KLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIA  193 (283)
T ss_dssp             TCCCSEEEEECCSHHHHH----HHHHHHHTTCS---EEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHH
T ss_pred             CcCCCEEEEECCcHHHHH----HHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHh
Confidence            356777666663112222    55666665422   6888888754332111       2344445554   34677889


Q ss_pred             cCcEEEecccc--ccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         125 KCRVILNCVGP--YTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       125 ~~dVVIN~aGP--f~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      ++|+||||..-  +-....++-..++..+...+|+.-.+
T Consensus       194 ~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P  232 (283)
T 3jyo_A          194 AADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMP  232 (283)
T ss_dssp             HSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSS
T ss_pred             cCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCC
Confidence            99999999831  11111233334455566667776544

>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*

Probab=90.53  E-value=0.61  Score=39.44  Aligned_cols=61  Identities=13%  Similarity=0.022  Sum_probs=45.8

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCCE-eeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTHH-VDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGthY-VDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++.+  .+|+||.|+.|...  ..+++.|+++|+|. |=++.-.+. ++. .++.+.|++.|+.++
T Consensus        56 l~el~~~~~~D~viI~tP~~~~--~~~~~ea~~~Gi~~iVi~t~G~~~-~~~-~~l~~~A~~~gv~li  119 (288)
T 2nu8_A           56 VREAVAATGATASVIYVPAPFC--KDSILEAIDAGIKLIITITEGIPT-LDM-LTVKVKLDEAGVRMI  119 (288)
T ss_dssp             HHHHHHHHCCCEEEECCCGGGH--HHHHHHHHHTTCSEEEECCCCCCH-HHH-HHHHHHHHHHTCEEE
T ss_pred             HHHHhhcCCCCEEEEecCHHHH--HHHHHHHHHCCCCEEEEECCCCCH-HHH-HHHHHHHHHcCCEEE
Confidence            566666  89999999976543  69999999999995 666653332 233 578889999998765

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=90.34  E-value=0.56  Score=39.19  Aligned_cols=59  Identities=8%  Similarity=0.090  Sum_probs=42.8

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  ++|+|+.|..|...  ..++..|+++|.| +++  ++-..+   +. .++.+.|+++|+.++
T Consensus        55 ~~~~l~~~~~D~V~i~tp~~~h--~~~~~~al~~gk~v~~EKP~~~~~~---~~-~~l~~~a~~~g~~~~  118 (331)
T 4hkt_A           55 IDAIEAAADIDAVVICTPTDTH--ADLIERFARAGKAIFCEKPIDLDAE---RV-RACLKVVSDTKAKLM  118 (331)
T ss_dssp             HHHHHHCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEECSCSCSSHH---HH-HHHHHHHHHTTCCEE
T ss_pred             HHHHhcCCCCCEEEEeCCchhH--HHHHHHHHHcCCcEEEecCCCCCHH---HH-HHHHHHHHHcCCeEE
Confidence            566776  79999999966544  4888999999999 555  333333   33 467778999998764

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=90.23  E-value=0.62  Score=39.79  Aligned_cols=60  Identities=13%  Similarity=0.072  Sum_probs=43.2

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  +.|+|+-|..|...  ..++.+|+++|.| +++  ++-+.+   +. .++-+.|+++|+.++
T Consensus        56 ~~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~aGkhVl~EKP~a~~~~---ea-~~l~~~a~~~g~~~~  120 (359)
T 3e18_A           56 SYEAVLADEKVDAVLIATPNDSH--KELAISALEAGKHVVCEKPVTMTSE---DL-LAIMDVAKRVNKHFM  120 (359)
T ss_dssp             CHHHHHHCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEEESSCCSSHH---HH-HHHHHHHHHHTCCEE
T ss_pred             CHHHHhcCCCCCEEEEcCCcHHH--HHHHHHHHHCCCCEEeeCCCcCCHH---HH-HHHHHHHHHhCCeEE
Confidence            3566776  78999999866544  5888999999999 665  444443   33 456678888888664

>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}

Probab=90.23  E-value=0.62  Score=38.98  Aligned_cols=60  Identities=12%  Similarity=0.025  Sum_probs=43.6

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  +.|+|+-|..+...  ..++.+|+++|.| +++  ++-+.+   +. .++-+.|+++|+.++
T Consensus        57 ~~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~aGkhVl~EKP~a~~~~---e~-~~l~~~a~~~g~~~~  121 (336)
T 2p2s_A           57 SAEQLITDASIDLIACAVIPCDR--AELALRTLDAGKDFFTAKPPLTTLE---QL-DAVQRRVAETGRKFA  121 (336)
T ss_dssp             CHHHHHTCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEECSSCCSCHH---HH-HHHHHHHHHHCCCEE
T ss_pred             CHHHHhhCCCCCEEEEeCChhhH--HHHHHHHHHCCCcEEEeCCCCCCHH---HH-HHHHHHHHHcCCEEE
Confidence            3567776  68999999865544  5888899999999 776  444443   33 466778888888664

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=90.21  E-value=0.034  Score=46.76  Aligned_cols=77  Identities=12%  Similarity=0.047  Sum_probs=52.5

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-----ccCCCCCCEEEEeCCCHHHHHHHhhc--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-----RENLIDIPIIIADLKNESSILIMAKK--  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-----~~~~~~v~~v~vDv~D~~sL~a~l~~--  125 (184)
                      ++||+.-|.|-   ++|----++..|++..    .++++.+|+....     .....+...+++|+.|+++++++++.  
T Consensus         7 L~GKvalVTGa---s~GIG~aiA~~la~~G----a~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~   79 (247)
T 4hp8_A            7 LEGRKALVTGA---NTGLGQAIAVGLAAAG----AEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAG   79 (247)
T ss_dssp             CTTCEEEETTT---TSHHHHHHHHHHHHTT----CEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTC
T ss_pred             CCCCEEEEeCc---CCHHHHHHHHHHHHcC----CEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCC
Confidence            47999888772   3331122455555554    7889998864210     11225678999999999998888764  


Q ss_pred             CcEEEeccccc
Q psy1304         126 CRVILNCVGPY  136 (184)
Q Consensus       126 ~dVVIN~aGPf  136 (184)
                      .|++||+||-.
T Consensus        80 iDiLVNNAGi~   90 (247)
T 4hp8_A           80 FDILVNNAGII   90 (247)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            79999999954

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=90.13  E-value=0.067  Score=42.39  Aligned_cols=78  Identities=17%  Similarity=0.123  Sum_probs=47.0

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEee-eecccccc-------cCCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLL-GARDCLYR-------ENLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLA-Grr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .++||+.-|.|-   .+|--.-++.+|++..    .++.+. +++.+...       ....++.++.+|+.|.+++++++
T Consensus         4 ~l~~k~vlITGa---s~gIG~~~a~~l~~~G----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   76 (255)
T 3icc_A            4 MLKGKVALVTGA---SRGIGRAIAKRLANDG----ALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALY   76 (255)
T ss_dssp             TTTTCEEEETTC---SSHHHHHHHHHHHHTT----CEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred             ccCCCEEEEECC---CChHHHHHHHHHHHCC----CeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHH
Confidence            356666666552   1220011455555543    456553 44432111       11245778899999999999887


Q ss_pred             hc-------------CcEEEeccccc
Q psy1304         124 KK-------------CRVILNCVGPY  136 (184)
Q Consensus       124 ~~-------------~dVVIN~aGPf  136 (184)
                      +.             .|++||++|..
T Consensus        77 ~~~~~~~~~~~~~~~id~lv~nAg~~  102 (255)
T 3icc_A           77 SSLDNELQNRTGSTKFDILINNAGIG  102 (255)
T ss_dssp             HHHHHHHHHHHSSSCEEEEEECCCCC
T ss_pred             HHHHHHhcccccCCcccEEEECCCCC
Confidence            64             89999999854

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=89.89  E-value=0.72  Score=38.76  Aligned_cols=60  Identities=17%  Similarity=-0.014  Sum_probs=43.1

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  ++|+|+.|..|...  ..++..|+++|.| +++  ++-+.   .+. .++.+.|+++|+.++
T Consensus        58 ~~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~~gk~vl~EKP~~~~~---~e~-~~l~~~a~~~g~~~~  122 (330)
T 3e9m_A           58 SYEELCKDETIDIIYIPTYNQGH--YSAAKLALSQGKPVLLEKPFTLNA---AEA-EELFAIAQEQGVFLM  122 (330)
T ss_dssp             SHHHHHHCTTCSEEEECCCGGGH--HHHHHHHHHTTCCEEECSSCCSSH---HHH-HHHHHHHHHTTCCEE
T ss_pred             CHHHHhcCCCCCEEEEcCCCHHH--HHHHHHHHHCCCeEEEeCCCCCCH---HHH-HHHHHHHHHcCCeEE
Confidence            3566776  79999999866644  5888999999999 554  33333   233 467788999998764

>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*

Probab=89.68  E-value=0.52  Score=43.04  Aligned_cols=62  Identities=16%  Similarity=0.014  Sum_probs=45.2

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  +.|+||.|.|+. .....++.+|+++|.|-+  |.+.+..-..-.++.+.|+++|+.+.
T Consensus        99 ~eeLL~d~dIDaVviaTp~p-~~H~e~a~~AL~AGKHVv--~~nk~l~~~eg~eL~~~A~e~Gvvl~  162 (446)
T 3upl_A           99 NDLILSNPLIDVIIDATGIP-EVGAETGIAAIRNGKHLV--MMNVEADVTIGPYLKAQADKQGVIYS  162 (446)
T ss_dssp             HHHHHTCTTCCEEEECSCCH-HHHHHHHHHHHHTTCEEE--ECCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             HHHHhcCCCCCEEEEcCCCh-HHHHHHHHHHHHcCCcEE--ecCcccCHHHHHHHHHHHHHhCCeee
Confidence            566776  589999999753 345689999999999966  33444432223688999999998763

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=89.65  E-value=0.17  Score=46.20  Aligned_cols=34  Identities=9%  Similarity=0.133  Sum_probs=29.6

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhc------CcEEEecccccc
Q psy1304         104 IDIPIIIADLKNESSILIMAKK------CRVILNCVGPYT  137 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~------~dVVIN~aGPf~  137 (184)
                      .++.++.||+.|++++.++++.      .|+|||++|-..
T Consensus       315 ~~v~~~~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~  354 (525)
T 3qp9_A          315 ATATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVD  354 (525)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCC
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCC
Confidence            4578999999999999999987      499999999653

>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}

Probab=89.57  E-value=1.2  Score=37.61  Aligned_cols=59  Identities=14%  Similarity=0.111  Sum_probs=41.5

Q ss_pred             HHHHhhc--CcEEEeccccccccchHHHHHHHHcCCCE-ee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAKK--CRVILNCVGPYTWYGEAVVKACIEAKTHH-VD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~~--~dVVIN~aGPf~~~g~~VaeACieAGthY-VD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++.  .|+|+.|..|...  ..++.+|+++|.|- ++  ++-+.+   +. .++-+.|+++|+.++
T Consensus        57 ~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~aGk~Vl~EKP~a~~~~---e~-~~l~~~a~~~g~~~~  120 (345)
T 3f4l_A           57 LDEVLNDPDVKLVVVCTHADSH--FEYAKRALEAGKNVLVEKPFTPTLA---QA-KELFALAKSKGLTVT  120 (345)
T ss_dssp             THHHHTCTTEEEEEECSCGGGH--HHHHHHHHHTTCEEEECSSSCSSHH---HH-HHHHHHHHHHTCCEE
T ss_pred             HHHHhcCCCCCEEEEcCChHHH--HHHHHHHHHcCCcEEEeCCCCCCHH---HH-HHHHHHHHHcCCeEE
Confidence            5667765  8999999965544  58889999999994 43  233333   33 456678888888664

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=89.53  E-value=0.83  Score=38.09  Aligned_cols=59  Identities=7%  Similarity=-0.088  Sum_probs=42.1

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHc-CCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQES-EVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~Akaa-GV~Iv  183 (184)
                      ++++++  ++|+|+.|.+|...  ..++..|+++|.| +++  ++-+.   .+. .++.+.|+++ |+.++
T Consensus        63 ~~~~l~~~~~D~V~i~tp~~~h--~~~~~~al~~G~~v~~eKp~~~~~---~~~-~~l~~~a~~~~~~~~~  127 (346)
T 3cea_A           63 YKDMIDTENIDAIFIVAPTPFH--PEMTIYAMNAGLNVFCEKPLGLDF---NEV-DEMAKVIKSHPNQIFQ  127 (346)
T ss_dssp             HHHHHTTSCCSEEEECSCGGGH--HHHHHHHHHTTCEEEECSCCCSCH---HHH-HHHHHHHHTCTTSCEE
T ss_pred             HHHHhcCCCCCEEEEeCChHhH--HHHHHHHHHCCCEEEEcCCCCCCH---HHH-HHHHHHHHhCCCCeEE
Confidence            566676  69999999976544  5788899999999 554  33333   233 4677788888 88764

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=89.50  E-value=0.14  Score=44.14  Aligned_cols=58  Identities=14%  Similarity=0.059  Sum_probs=41.5

Q ss_pred             HHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEee-CCCChHHHHHHHHHhHHHHHHcCC
Q psy1304         118 SILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVD-ITGEPYFMEYMQYEYNTRAQESEV  180 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVD-ltGE~~~~~~ii~~lhe~AkaaGV  180 (184)
                      ++++++.++|+||++..|-..  ...++.|+++|++.|= .||   |..+...++.+.|++.++
T Consensus        81 dl~~ll~~aDVvIDFT~p~a~--~~~~~~~l~~Gv~vViGTTG---~~~e~~~~L~~aa~~~~~  139 (288)
T 3ijp_A           81 DPESAFSNTEGILDFSQPQAS--VLYANYAAQKSLIHIIGTTG---FSKTEEAQIADFAKYTTI  139 (288)
T ss_dssp             CHHHHTTSCSEEEECSCHHHH--HHHHHHHHHHTCEEEECCCC---CCHHHHHHHHHHHTTSEE
T ss_pred             CHHHHhcCCCEEEEcCCHHHH--HHHHHHHHHcCCCEEEECCC---CCHHHHHHHHHHhCcCCE
Confidence            467788899999999866543  5788999999999764 455   333223567777776544

>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5

Probab=89.38  E-value=0.99  Score=37.46  Aligned_cols=61  Identities=18%  Similarity=0.179  Sum_probs=43.5

Q ss_pred             CCHHHHHHHhhcCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         114 KNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       114 ~D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +|.++|   ..++|+|+.|..|...  ..++.+|+++|.| +++  ++-+.   .+. .++.+.|+++|+.++
T Consensus        57 ~~~~~l---~~~~D~V~i~tp~~~h--~~~~~~al~~G~~v~~eKP~~~~~---~~~-~~l~~~a~~~g~~~~  120 (319)
T 1tlt_A           57 DSLSSL---AASCDAVFVHSSTASH--FDVVSTLLNAGVHVCVDKPLAENL---RDA-ERLVELAARKKLTLM  120 (319)
T ss_dssp             SSHHHH---HTTCSEEEECSCTTHH--HHHHHHHHHTTCEEEEESSSCSSH---HHH-HHHHHHHHHTTCCEE
T ss_pred             CcHHHh---hcCCCEEEEeCCchhH--HHHHHHHHHcCCeEEEeCCCCCCH---HHH-HHHHHHHHHcCCeEE
Confidence            455554   5789999999966544  5888899999999 665  33333   333 567788999998764

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=89.37  E-value=0.22  Score=45.45  Aligned_cols=60  Identities=12%  Similarity=0.128  Sum_probs=43.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc----------cCCCCCCEEEEeCCCHHHHHHHhhc------CcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR----------ENLIDIPIIIADLKNESSILIMAKK------CRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~----------~~~~~v~~v~vDv~D~~sL~a~l~~------~dVVIN~aGPf  136 (184)
                      ++.+|++....   ++.+.+|+.....          ..-.++.++.||+.|++++.++++.      .|+|||++|-.
T Consensus       255 lA~~La~~Ga~---~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~vVh~AGv~  330 (496)
T 3mje_A          255 VARRLAEQGAA---HLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPLTAVFHSAGVA  330 (496)
T ss_dssp             HHHHHHHTTCS---EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEEEEECCCCC
T ss_pred             HHHHHHHCCCc---EEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeEEEECCccc
Confidence            56666655422   7888888632110          0124678999999999999999985      68999999965

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=89.29  E-value=0.93  Score=37.97  Aligned_cols=60  Identities=18%  Similarity=0.090  Sum_probs=43.6

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  +.|+|+.|..|...  ..++.+|+++|.| +++  ++-+.+   +. .++-+.|+++|+.++
T Consensus        57 ~~~~ll~~~~vD~V~i~tp~~~H--~~~~~~al~~GkhVl~EKP~a~~~~---e~-~~l~~~a~~~~~~~~  121 (334)
T 3ohs_X           57 SYEELAKDPNVEVAYVGTQHPQH--KAAVMLCLAAGKAVLCEKPMGVNAA---EV-REMVTEARSRGLFLM  121 (334)
T ss_dssp             SHHHHHHCTTCCEEEECCCGGGH--HHHHHHHHHTTCEEEEESSSSSSHH---HH-HHHHHHHHHTTCCEE
T ss_pred             CHHHHhcCCCCCEEEECCCcHHH--HHHHHHHHhcCCEEEEECCCCCCHH---HH-HHHHHHHHHhCCEEE
Confidence            3566776  69999999965544  5889999999999 666  444433   33 456678888898764

>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A

Probab=89.28  E-value=0.55  Score=39.82  Aligned_cols=59  Identities=7%  Similarity=-0.036  Sum_probs=42.3

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  ++|+|+.|..|...  ..++.+|+++|.| +++  ++-+.   .+. .++.+.|+++|+.++
T Consensus        63 ~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~aGk~V~~EKP~a~~~---~e~-~~l~~~a~~~g~~~~  126 (362)
T 1ydw_A           63 YESLLEDPEIDALYVPLPTSLH--VEWAIKAAEKGKHILLEKPVAMNV---TEF-DKIVDACEANGVQIM  126 (362)
T ss_dssp             HHHHHHCTTCCEEEECCCGGGH--HHHHHHHHTTTCEEEECSSCSSSH---HHH-HHHHHHHHTTTCCEE
T ss_pred             HHHHhcCCCCCEEEEcCChHHH--HHHHHHHHHCCCeEEEecCCcCCH---HHH-HHHHHHHHHcCCEEE
Confidence            566776  59999999965544  5888899999999 444  22222   343 577888999998764

>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*

Probab=89.15  E-value=0.64  Score=40.96  Aligned_cols=60  Identities=12%  Similarity=-0.018  Sum_probs=43.6

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  +.|+|+.|..|...  ..++.+|+++|.| +++  ++-+.   .+. +++-+.|+++|+.++
T Consensus        82 ~~~~ll~~~~vD~V~i~tp~~~h--~~~~~~al~aGkhV~~EKP~a~~~---~ea-~~l~~~a~~~g~~~~  146 (444)
T 2ixa_A           82 DYKNMLKDKNIDAVFVSSPWEWH--HEHGVAAMKAGKIVGMEVSGAITL---EEC-WDYVKVSEQTGVPLM  146 (444)
T ss_dssp             THHHHTTCTTCCEEEECCCGGGH--HHHHHHHHHTTCEEEECCCCCSSH---HHH-HHHHHHHHHHCCCEE
T ss_pred             CHHHHhcCCCCCEEEEcCCcHHH--HHHHHHHHHCCCeEEEeCCCcCCH---HHH-HHHHHHHHHhCCeEE
Confidence            5777887  58999999966544  5888999999999 665  23333   333 567778888887654

>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}

Probab=89.09  E-value=0.78  Score=38.80  Aligned_cols=89  Identities=13%  Similarity=0.137  Sum_probs=55.5

Q ss_pred             hCCCCCceeE-EeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc--CcEEEeccccccccchHHHHHHHHcCCC-Ee
Q psy1304          80 DAPTSNLTRL-GLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK--CRVILNCVGPYTWYGEAVVKACIEAKTH-HV  155 (184)
Q Consensus        80 ~~~~~~~~~i-aLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~g~~VaeACieAGth-YV  155 (184)
                      +..|+  ++| +++.++.+...........    ..   +++++++.  .|+|+.|..|...  ..++.+|+++|.| |+
T Consensus        28 ~~~~~--~~l~av~d~~~~~~~~~~~~~~~----~~---~~~~ll~~~~vD~V~i~tp~~~H--~~~~~~al~aGkhV~~   96 (352)
T 3kux_A           28 MGTPG--LELAGVSSSDASKVHADWPAIPV----VS---DPQMLFNDPSIDLIVIPTPNDTH--FPLAQSALAAGKHVVV   96 (352)
T ss_dssp             HTSTT--EEEEEEECSCHHHHHTTCSSCCE----ES---CHHHHHHCSSCCEEEECSCTTTH--HHHHHHHHHTTCEEEE
T ss_pred             hhCCC--cEEEEEECCCHHHHHhhCCCCce----EC---CHHHHhcCCCCCEEEEeCChHHH--HHHHHHHHHCCCcEEE
Confidence            34566  665 4666655443222222221    12   35667765  9999999855544  5888999999999 66


Q ss_pred             e--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         156 D--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       156 D--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +  ++-+.   .+. .++-+.|+++|+.++
T Consensus        97 EKPla~~~---~e~-~~l~~~a~~~g~~~~  122 (352)
T 3kux_A           97 DKPFTVTL---SQA-NALKEHADDAGLLLS  122 (352)
T ss_dssp             CSSCCSCH---HHH-HHHHHHHHHTTCCEE
T ss_pred             ECCCcCCH---HHH-HHHHHHHHHcCCeEE
Confidence            5  33333   233 467788999998764

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=89.02  E-value=0.71  Score=38.86  Aligned_cols=59  Identities=17%  Similarity=0.230  Sum_probs=42.5

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  ++|+|+-|..|...  ..++..|+++|.| +++  ++-..+   +. .++.+.|+++|+.++
T Consensus        56 ~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~~gk~v~~EKP~~~~~~---e~-~~l~~~a~~~g~~~~  119 (344)
T 3ezy_A           56 PHELIEDPNVDAVLVCSSTNTH--SELVIACAKAKKHVFCEKPLSLNLA---DV-DRMIEETKKADVILF  119 (344)
T ss_dssp             HHHHHHCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEEESCSCSCHH---HH-HHHHHHHHHHTCCEE
T ss_pred             HHHHhcCCCCCEEEEcCCCcch--HHHHHHHHhcCCeEEEECCCCCCHH---HH-HHHHHHHHHhCCcEE
Confidence            566777  79999999966544  5888899999999 555  333333   33 466778888888664

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=88.97  E-value=0.65  Score=39.00  Aligned_cols=60  Identities=8%  Similarity=-0.045  Sum_probs=43.0

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  ++|+|+.|..|...  ..++.+|+++|.| +++  ++-+.+   +. .++.+.|+++|+.++
T Consensus        56 ~~~~~l~~~~~D~V~i~tp~~~h--~~~~~~al~~gk~v~~EKP~~~~~~---~~-~~l~~~a~~~g~~~~  120 (344)
T 3euw_A           56 SPDEVFARDDIDGIVIGSPTSTH--VDLITRAVERGIPALCEKPIDLDIE---MV-RACKEKIGDGASKVM  120 (344)
T ss_dssp             SHHHHTTCSCCCEEEECSCGGGH--HHHHHHHHHTTCCEEECSCSCSCHH---HH-HHHHHHHGGGGGGEE
T ss_pred             CHHHHhcCCCCCEEEEeCCchhh--HHHHHHHHHcCCcEEEECCCCCCHH---HH-HHHHHHHHhcCCeEE
Confidence            4677787  79999999966544  5888999999999 554  333333   33 467778888887654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=88.88  E-value=0.13  Score=41.31  Aligned_cols=78  Identities=12%  Similarity=0.151  Sum_probs=43.5

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCC-CHHHHHHHhhcCcE
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLK-NESSILIMAKKCRV  128 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~-D~~sL~a~l~~~dV  128 (184)
                      .+.++||+.-|.|-   .+|--..++..|++.  +  .++.+.+|+.+... ..+...++ +|+. +.+.+.+.+.+.|+
T Consensus        14 ~~~~~~k~vlVTGa---s~gIG~~~a~~l~~~--G--~~V~~~~r~~~~~~-~~~~~~~~-~D~~~~~~~~~~~~~~iD~   84 (249)
T 1o5i_A           14 ELGIRDKGVLVLAA---SRGIGRAVADVLSQE--G--AEVTICARNEELLK-RSGHRYVV-CDLRKDLDLLFEKVKEVDI   84 (249)
T ss_dssp             --CCTTCEEEEESC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHH-HTCSEEEE-CCTTTCHHHHHHHSCCCSE
T ss_pred             HhccCCCEEEEECC---CCHHHHHHHHHHHHC--C--CEEEEEcCCHHHHH-hhCCeEEE-eeHHHHHHHHHHHhcCCCE
Confidence            34577777777662   122001144555544  3  67888888764322 12345556 8982 33344444448899


Q ss_pred             EEeccccc
Q psy1304         129 ILNCVGPY  136 (184)
Q Consensus       129 VIN~aGPf  136 (184)
                      |||++|..
T Consensus        85 lv~~Ag~~   92 (249)
T 1o5i_A           85 LVLNAGGP   92 (249)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999854

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=88.79  E-value=0.14  Score=43.55  Aligned_cols=114  Identities=11%  Similarity=0.026  Sum_probs=59.9

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcCcEEEec
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNC  132 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~  132 (184)
                      ++||+.-|-|-=.-||.    ++.+|++....   +|.+..|+.+..........  ..   ..+++.+.++++|+||||
T Consensus       115 l~~k~vlvlGaGg~g~a----ia~~L~~~G~~---~v~v~~R~~~~a~~la~~~~--~~---~~~~~~~~~~~aDiVIna  182 (277)
T 3don_A          115 IEDAYILILGAGGASKG----IANELYKIVRP---TLTVANRTMSRFNNWSLNIN--KI---NLSHAESHLDEFDIIINT  182 (277)
T ss_dssp             GGGCCEEEECCSHHHHH----HHHHHHTTCCS---CCEEECSCGGGGTTCCSCCE--EE---CHHHHHHTGGGCSEEEEC
T ss_pred             cCCCEEEEECCcHHHHH----HHHHHHHCCCC---EEEEEeCCHHHHHHHHHhcc--cc---cHhhHHHHhcCCCEEEEC
Confidence            56777666653222222    55566665432   67778887766543323222  22   345678889999999999


Q ss_pred             cccc--cccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         133 VGPY--TWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       133 aGPf--~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      .+.-  .....++-...+..+...+|+.=.+.-+     .+-++|+++|+.++
T Consensus       183 Tp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T-----~ll~~A~~~G~~~~  230 (277)
T 3don_A          183 TPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKT-----PILIEAEQRGNPIY  230 (277)
T ss_dssp             CC-------CCSSCCTTCCSSCEEEESCCSSSSC-----HHHHHHHHTTCCEE
T ss_pred             ccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCC-----HHHHHHHHCcCEEe
Confidence            7321  1111111123345566677876433211     23445666776554

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=88.71  E-value=0.71  Score=39.48  Aligned_cols=89  Identities=15%  Similarity=0.097  Sum_probs=55.0

Q ss_pred             hCCCCCceeE-EeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Ee
Q psy1304          80 DAPTSNLTRL-GLLGARDCLYRENLIDIPIIIADLKNESSILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HV  155 (184)
Q Consensus        80 ~~~~~~~~~i-aLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YV  155 (184)
                      +..|+  +++ +++.++.+...........  .  .   +++++++  +.|+|+.|..|...  ..++.+|+++|.| ++
T Consensus        28 ~~~~~--~~l~av~d~~~~~~~~~~~~~~~--~--~---~~~~ll~~~~~D~V~i~tp~~~H--~~~~~~al~aGk~Vl~   96 (364)
T 3e82_A           28 RSVPG--LNLAFVASRDEEKVKRDLPDVTV--I--A---SPEAAVQHPDVDLVVIASPNATH--APLARLALNAGKHVVV   96 (364)
T ss_dssp             HTSTT--EEEEEEECSCHHHHHHHCTTSEE--E--S---CHHHHHTCTTCSEEEECSCGGGH--HHHHHHHHHTTCEEEE
T ss_pred             hhCCC--eEEEEEEcCCHHHHHhhCCCCcE--E--C---CHHHHhcCCCCCEEEEeCChHHH--HHHHHHHHHCCCcEEE
Confidence            44566  666 4666655432212222221  1  2   3667777  78999999865544  5888999999999 44


Q ss_pred             eC--CCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         156 DI--TGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       156 Dl--tGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +=  +-+.   .+. .++-+.|+++|+.++
T Consensus        97 EKPla~~~---~e~-~~l~~~a~~~g~~~~  122 (364)
T 3e82_A           97 DKPFTLDM---QEA-RELIALAEEKQRLLS  122 (364)
T ss_dssp             CSCSCSSH---HHH-HHHHHHHHHTTCCEE
T ss_pred             eCCCcCCH---HHH-HHHHHHHHHhCCeEE
Confidence            32  3332   333 567778999998764

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=88.56  E-value=0.97  Score=37.83  Aligned_cols=60  Identities=20%  Similarity=0.021  Sum_probs=43.3

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  ++|+|+.|..|...  ..++.+|+++|.| +++  ++-+.+   +. .++-+.|+++|+.++
T Consensus        58 ~~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~aGk~Vl~EKP~a~~~~---e~-~~l~~~a~~~~~~~~  122 (329)
T 3evn_A           58 KLEDMLADESIDVIYVATINQDH--YKVAKAALLAGKHVLVEKPFTLTYD---QA-NELFALAESCNLFLM  122 (329)
T ss_dssp             CHHHHHTCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEEESSCCSSHH---HH-HHHHHHHHHTTCCEE
T ss_pred             CHHHHhcCCCCCEEEECCCcHHH--HHHHHHHHHCCCeEEEccCCcCCHH---HH-HHHHHHHHHcCCEEE
Confidence            3567777  79999999866544  5888999999999 554  333333   33 466778889998664

>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}

Probab=88.35  E-value=0.76  Score=39.56  Aligned_cols=60  Identities=12%  Similarity=0.018  Sum_probs=42.7

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  +.|+|+.|..|...  ..++.+|+++|.| +++  ++-..   .+. .++.+.|+++|+.++
T Consensus        55 ~~~ell~~~~vD~V~i~tp~~~H--~~~~~~al~aGk~Vl~EKP~a~~~---~e~-~~l~~~a~~~g~~~~  119 (387)
T 3moi_A           55 TLAEMMQHVQMDAVYIASPHQFH--CEHVVQASEQGLHIIVEKPLTLSR---DEA-DRMIEAVERAGVHLV  119 (387)
T ss_dssp             SHHHHHHHSCCSEEEECSCGGGH--HHHHHHHHHTTCEEEECSCCCSCH---HHH-HHHHHHHHHHTCCEE
T ss_pred             CHHHHHcCCCCCEEEEcCCcHHH--HHHHHHHHHCCCceeeeCCccCCH---HHH-HHHHHHHHHhCCeEE
Confidence            3566666  49999999976544  4889999999999 555  33333   333 466778888888764

>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}

Probab=88.20  E-value=0.81  Score=38.88  Aligned_cols=62  Identities=18%  Similarity=0.080  Sum_probs=45.5

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-EeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++.+  .+|++|.++.|..  -..+++.|+++|++ -|=++.-.+- .+. .++.+.|++.|+.++
T Consensus        61 sl~el~~~~~~Dv~ii~vp~~~--~~~~v~ea~~~Gi~~vVi~t~G~~~-~~~-~~l~~~A~~~gi~vi  125 (294)
T 2yv1_A           61 TVKEAVKETDANASVIFVPAPF--AKDAVFEAIDAGIELIVVITEHIPV-HDT-MEFVNYAEDVGVKII  125 (294)
T ss_dssp             SHHHHHHHHCCCEEEECCCHHH--HHHHHHHHHHTTCSEEEECCSCCCH-HHH-HHHHHHHHHHTCEEE
T ss_pred             CHHHHhhcCCCCEEEEccCHHH--HHHHHHHHHHCCCCEEEEECCCCCH-HHH-HHHHHHHHHcCCEEE
Confidence            4566666  8999999997653  36899999999999 5655543222 233 578889999998765

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=88.01  E-value=0.087  Score=38.97  Aligned_cols=67  Identities=13%  Similarity=0.063  Sum_probs=39.6

Q ss_pred             eeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCC
Q psy1304          87 TRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITG  159 (184)
Q Consensus        87 ~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltG  159 (184)
                      .++.+.+|+.+..............+.++   +.++++++|+||+|.+.....   +...+++.|.+++|++-
T Consensus        45 ~~v~v~~r~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~Divi~at~~~~~~---~~~~~l~~g~~vid~~~  111 (144)
T 3oj0_A           45 YKVTVAGRNIDHVRAFAEKYEYEYVLIND---IDSLIKNNDVIITATSSKTPI---VEERSLMPGKLFIDLGN  111 (144)
T ss_dssp             CEEEEEESCHHHHHHHHHHHTCEEEECSC---HHHHHHTCSEEEECSCCSSCS---BCGGGCCTTCEEEECCS
T ss_pred             CEEEEEcCCHHHHHHHHHHhCCceEeecC---HHHHhcCCCEEEEeCCCCCcE---eeHHHcCCCCEEEEccC
Confidence            56888887654322111111222223333   566789999999999754221   12245677999999864

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=87.97  E-value=1  Score=37.99  Aligned_cols=60  Identities=13%  Similarity=0.180  Sum_probs=42.8

Q ss_pred             HHHHHh--hcCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMA--KKCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l--~~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  .++|+|+.|..|...  ..++.+|+++|.| +++  ++-..+   +. .++.+.|+++|+.++
T Consensus        57 ~~~~~l~~~~~D~V~i~tp~~~h--~~~~~~al~~gk~vl~EKP~~~~~~---~~-~~l~~~a~~~~~~~~  121 (354)
T 3db2_A           57 TMEALLAREDVEMVIITVPNDKH--AEVIEQCARSGKHIYVEKPISVSLD---HA-QRIDQVIKETGVKFL  121 (354)
T ss_dssp             SHHHHHHCSSCCEEEECSCTTSH--HHHHHHHHHTTCEEEEESSSCSSHH---HH-HHHHHHHHHHCCCEE
T ss_pred             CHHHHhcCCCCCEEEEeCChHHH--HHHHHHHHHcCCEEEEccCCCCCHH---HH-HHHHHHHHHcCCeEE
Confidence            356677  469999999976544  5888999999999 555  333333   33 466778888888664

>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*

Probab=87.94  E-value=0.26  Score=43.30  Aligned_cols=96  Identities=18%  Similarity=0.137  Sum_probs=58.3

Q ss_pred             hhhhhhCCCCCceeE-EeeeecccccccCC--CCCCEEEEeCCCHHHHHHHhhcCcEEEecccccccc--chHHHHHHHH
Q psy1304          75 SAYKADAPTSNLTRL-GLLGARDCLYRENL--IDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWY--GEAVVKACIE  149 (184)
Q Consensus        75 ~~~La~~~~~~~~~i-aLAGrr~~lg~~~~--~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~--g~~VaeACie  149 (184)
                      ..++++.+++  +++ +++.++.+......  -+++.    ..|   +++++++.|+|+-|+.+....  +..++++|++
T Consensus        22 ~~a~~~~~~~--~elvav~~~~~~~a~~~a~~~gv~~----~~~---~~~l~~~~D~v~i~~p~~~h~~~~~~~a~~al~   92 (372)
T 4gmf_A           22 LNAFMQPPEG--LELVGLLAQGSARSRELAHAFGIPL----YTS---PEQITGMPDIACIVVRSTVAGGAGTQLARHFLA   92 (372)
T ss_dssp             HHTTSSCCTT--EEEEEEECCSSHHHHHHHHHTTCCE----ESS---GGGCCSCCSEEEECCC--CTTSHHHHHHHHHHH
T ss_pred             HHHHHhCCCC--eEEEEEECCCHHHHHHHHHHhCCCE----ECC---HHHHhcCCCEEEEECCCcccchhHHHHHHHHHH
Confidence            3445555556  654 46666554332111  12332    123   445678999999888544332  2689999999


Q ss_pred             cCCC-EeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         150 AKTH-HVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       150 AGth-YVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +|.| ++.=   |--..+. .++-+.|+++|+.++
T Consensus        93 aGkhVl~EK---Pl~~~ea-~~l~~~A~~~g~~~~  123 (372)
T 4gmf_A           93 RGVHVIQEH---PLHPDDI-SSLQTLAQEQGCCYW  123 (372)
T ss_dssp             TTCEEEEES---CCCHHHH-HHHHHHHHHHTCCEE
T ss_pred             cCCcEEEec---CCCHHHH-HHHHHHHHHcCCEEE
Confidence            9999 5552   1113455 688899999998775

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=87.70  E-value=1.1  Score=37.81  Aligned_cols=98  Identities=5%  Similarity=-0.100  Sum_probs=58.3

Q ss_pred             hhhhhhhCCCCCceeE-EeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh--cCcEEEeccccccccchHHHHHHHHc
Q psy1304          74 PSAYKADAPTSNLTRL-GLLGARDCLYRENLIDIPIIIADLKNESSILIMAK--KCRVILNCVGPYTWYGEAVVKACIEA  150 (184)
Q Consensus        74 ~~~~La~~~~~~~~~i-aLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieA  150 (184)
                      .+..|.+.+|+  +++ +++.++.+.............+ .+|   ++++++  +.|+|+-|..|...  ..++.+|+++
T Consensus        34 ~~~~l~~~~~~--~~lvav~d~~~~~~~~~a~~~~~~~~-~~~---~~~ll~~~~vD~V~i~tp~~~H--~~~~~~al~a  105 (340)
T 1zh8_A           34 HLPALKNLSHL--FEITAVTSRTRSHAEEFAKMVGNPAV-FDS---YEELLESGLVDAVDLTLPVELN--LPFIEKALRK  105 (340)
T ss_dssp             HHHHHHTTTTT--EEEEEEECSSHHHHHHHHHHHSSCEE-ESC---HHHHHHSSCCSEEEECCCGGGH--HHHHHHHHHT
T ss_pred             HHHHHHhCCCc--eEEEEEEcCCHHHHHHHHHHhCCCcc-cCC---HHHHhcCCCCCEEEEeCCchHH--HHHHHHHHHC
Confidence            34445555466  666 6666654432211111111000 123   566776  58999999966554  5889999999


Q ss_pred             CCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         151 KTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       151 Gth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      |.| |++  ++-+.+   +. .++-+.|+++|+.++
T Consensus       106 GkhVl~EKPla~~~~---ea-~~l~~~a~~~g~~~~  137 (340)
T 1zh8_A          106 GVHVICEKPISTDVE---TG-KKVVELSEKSEKTVY  137 (340)
T ss_dssp             TCEEEEESSSSSSHH---HH-HHHHHHHHHCSSCEE
T ss_pred             CCcEEEeCCCCCCHH---HH-HHHHHHHHHcCCeEE
Confidence            999 776  333333   33 466778899998764

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=87.67  E-value=0.31  Score=42.36  Aligned_cols=37  Identities=5%  Similarity=-0.031  Sum_probs=31.3

Q ss_pred             hhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         123 AKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       123 l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      +.++|+|+-|+|.+.  ....+.+++++|++.||++++.
T Consensus        66 ~~~vDvV~~a~g~~~--s~~~a~~~~~aG~~VId~Sa~~  102 (345)
T 2ozp_A           66 LEPADILVLALPHGV--FAREFDRYSALAPVLVDLSADF  102 (345)
T ss_dssp             CCCCSEEEECCCTTH--HHHTHHHHHTTCSEEEECSSTT
T ss_pred             hcCCCEEEEcCCcHH--HHHHHHHHHHCCCEEEEcCccc
Confidence            479999999998664  3578889999999999999863

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=87.36  E-value=0.61  Score=38.83  Aligned_cols=95  Identities=9%  Similarity=-0.066  Sum_probs=53.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcCcEEEecccccccc-chHHHHHHHHcCC
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWY-GEAVVKACIEAKT  152 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~-g~~VaeACieAGt  152 (184)
                      ++.+|++....   +|.+..|+.+..++.......  .+.   +++.+.++++|+||||...-... ..++-...+..+.
T Consensus       123 i~~~L~~~G~~---~I~v~nR~~~ka~~la~~~~~--~~~---~~~~~~~~~aDiVInatp~gm~p~~~~i~~~~l~~~~  194 (253)
T 3u62_A          123 VIYALLQMGVK---DIWVVNRTIERAKALDFPVKI--FSL---DQLDEVVKKAKSLFNTTSVGMKGEELPVSDDSLKNLS  194 (253)
T ss_dssp             HHHHHHHTTCC---CEEEEESCHHHHHTCCSSCEE--EEG---GGHHHHHHTCSEEEECSSTTTTSCCCSCCHHHHTTCS
T ss_pred             HHHHHHHcCCC---EEEEEeCCHHHHHHHHHHccc--CCH---HHHHhhhcCCCEEEECCCCCCCCCCCCCCHHHhCcCC
Confidence            34455554431   577777766554322233322  223   34677889999999998321110 1233345677888


Q ss_pred             CEeeCCCChHHHHHHHHHhHHHHHHcCCe-ee
Q psy1304         153 HHVDITGEPYFMEYMQYEYNTRAQESEVQ-KC  183 (184)
Q Consensus       153 hYVDltGE~~~~~~ii~~lhe~AkaaGV~-Iv  183 (184)
                      ..+|+.-. +      ..+-++|++.|+. ++
T Consensus       195 ~V~Divy~-~------T~ll~~A~~~G~~~~~  219 (253)
T 3u62_A          195 LVYDVIYF-D------TPLVVKARKLGVKHII  219 (253)
T ss_dssp             EEEECSSS-C------CHHHHHHHHHTCSEEE
T ss_pred             EEEEeeCC-C------cHHHHHHHHCCCcEEE
Confidence            88998765 1      1344456667766 44

>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*

Probab=87.31  E-value=0.93  Score=38.11  Aligned_cols=96  Identities=5%  Similarity=-0.070  Sum_probs=56.6

Q ss_pred             hhhhhhhCCCCCceeEE-eeeecccccccCCCCCC--EEEEeCCCHHHHHHHhhc--CcEEEeccccccccchHHHHHHH
Q psy1304          74 PSAYKADAPTSNLTRLG-LLGARDCLYRENLIDIP--IIIADLKNESSILIMAKK--CRVILNCVGPYTWYGEAVVKACI  148 (184)
Q Consensus        74 ~~~~La~~~~~~~~~ia-LAGrr~~lg~~~~~~v~--~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~g~~VaeACi  148 (184)
                      .+.+|.+..|+  .++. +..++.+..........  ....  +   +++++++.  +|+|+.|..|...  ..++.+|+
T Consensus        17 ~~~~l~~~~~~--~~l~av~d~~~~~~~~~~~~~g~~~~~~--~---~~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al   87 (344)
T 3mz0_A           17 HINRITNKLSG--AEIVAVTDVNQEAAQKVVEQYQLNATVY--P---NDDSLLADENVDAVLVTSWGPAH--ESSVLKAI   87 (344)
T ss_dssp             HHHHHHHTCSS--EEEEEEECSSHHHHHHHHHHTTCCCEEE--S---SHHHHHHCTTCCEEEECSCGGGH--HHHHHHHH
T ss_pred             HHHHHHhhCCC--cEEEEEEcCCHHHHHHHHHHhCCCCeee--C---CHHHHhcCCCCCEEEECCCchhH--HHHHHHHH
Confidence            34445435566  6654 66665443221111111  1222  2   35667765  8999999965544  58888999


Q ss_pred             HcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         149 EAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       149 eAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      ++|.| +++  ++-+.+   +. +++-+.|+++|+.+
T Consensus        88 ~~Gk~vl~EKP~a~~~~---e~-~~l~~~a~~~g~~~  120 (344)
T 3mz0_A           88 KAQKYVFCEKPLATTAE---GC-MRIVEEEIKVGKRL  120 (344)
T ss_dssp             HTTCEEEECSCSCSSHH---HH-HHHHHHHHHHSSCC
T ss_pred             HCCCcEEEcCCCCCCHH---HH-HHHHHHHHHHCCEE
Confidence            99999 554  333332   33 46777888998754

>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A

Probab=87.06  E-value=1.1  Score=38.24  Aligned_cols=59  Identities=15%  Similarity=0.121  Sum_probs=42.7

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  +.|+|+.|..|...  ..++.+|+++|.| +++  ++-..+   +. .++-+.|+++|+.++
T Consensus        57 ~~~ll~~~~vD~V~i~tp~~~H--~~~~~~al~aGkhVl~EKPla~~~~---e~-~~l~~~a~~~g~~~~  120 (358)
T 3gdo_A           57 LEEITNDPAIELVIVTTPSGLH--YEHTMACIQAGKHVVMEKPMTATAE---EG-ETLKRAADEKGVLLS  120 (358)
T ss_dssp             THHHHTCTTCCEEEECSCTTTH--HHHHHHHHHTTCEEEEESSCCSSHH---HH-HHHHHHHHHHTCCEE
T ss_pred             HHHHhcCCCCCEEEEcCCcHHH--HHHHHHHHHcCCeEEEecCCcCCHH---HH-HHHHHHHHHcCCeEE
Confidence            566777  68999999966544  5889999999999 555  333333   33 456678888888764

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=86.98  E-value=1.1  Score=37.71  Aligned_cols=97  Identities=8%  Similarity=-0.025  Sum_probs=58.2

Q ss_pred             hhhhhhhCCCCCceeE-EeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh--cCcEEEeccccccccchHHHHHHHHc
Q psy1304          74 PSAYKADAPTSNLTRL-GLLGARDCLYRENLIDIPIIIADLKNESSILIMAK--KCRVILNCVGPYTWYGEAVVKACIEA  150 (184)
Q Consensus        74 ~~~~La~~~~~~~~~i-aLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieA  150 (184)
                      .+..|.+..|+  .++ ++..++.+..........+..  ..|   ++++++  ++|+|+-|..|...  ..++.+|+++
T Consensus        28 ~~~~l~~~~~~--~~lvav~d~~~~~~~~~~~~~~~~~--~~~---~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~~   98 (354)
T 3q2i_A           28 HFGALEKHADR--AELIDVCDIDPAALKAAVERTGARG--HAS---LTDMLAQTDADIVILTTPSGLH--PTQSIECSEA   98 (354)
T ss_dssp             HHHHHHHTTTT--EEEEEEECSSHHHHHHHHHHHCCEE--ESC---HHHHHHHCCCSEEEECSCGGGH--HHHHHHHHHT
T ss_pred             HHHHHHhCCCC--eEEEEEEcCCHHHHHHHHHHcCCce--eCC---HHHHhcCCCCCEEEECCCcHHH--HHHHHHHHHC
Confidence            44556666567  664 466665443221111112211  223   455665  79999999866644  4788999999


Q ss_pred             CCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         151 KTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       151 Gth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      |.| +++  ++.+.+   +. .++.+.|+++|+.++
T Consensus        99 gk~v~~EKP~a~~~~---~~-~~l~~~a~~~g~~~~  130 (354)
T 3q2i_A           99 GFHVMTEKPMATRWE---DG-LEMVKAADKAKKHLF  130 (354)
T ss_dssp             TCEEEECSSSCSSHH---HH-HHHHHHHHHHTCCEE
T ss_pred             CCCEEEeCCCcCCHH---HH-HHHHHHHHHhCCeEE
Confidence            999 443  344433   33 466778888887664

>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}

Probab=86.83  E-value=1.1  Score=37.88  Aligned_cols=54  Identities=9%  Similarity=0.126  Sum_probs=39.9

Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      .+.|+|+.|..|...  .+++.+|+++|.| |++  ++-+.+   +. +++-+.|+++|+.++
T Consensus        72 ~~vD~V~I~tP~~~H--~~~~~~al~aGkhVl~EKPla~~~~---ea-~~l~~~a~~~g~~~~  128 (318)
T 3oa2_A           72 TALDYVSICSPNYLH--YPHIAAGLRLGCDVICEKPLVPTPE---ML-DQLAVIERETDKRLY  128 (318)
T ss_dssp             TSCCEEEECSCGGGH--HHHHHHHHHTTCEEEECSSCCSCHH---HH-HHHHHHHHHHTCCEE
T ss_pred             CCCcEEEECCCcHHH--HHHHHHHHHCCCeEEEECCCcCCHH---HH-HHHHHHHHHhCCEEE
Confidence            569999999976655  5899999999999 766  333333   33 456678888888664

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=86.78  E-value=0.66  Score=39.28  Aligned_cols=59  Identities=20%  Similarity=0.139  Sum_probs=42.4

Q ss_pred             HHHHhhc--CcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAKK--CRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~~--~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++.  .|+|+.|..|...  ..++.+|+++|.| +++  ++-+   ..+. .++-+.|+++|+.++
T Consensus        57 ~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~aGk~Vl~EKP~a~~---~~e~-~~l~~~a~~~g~~~~  120 (349)
T 3i23_A           57 LNELLTDPEIELITICTPAHTH--YDLAKQAILAGKSVIVEKPFCDT---LEHA-EELFALGQEKGVVVM  120 (349)
T ss_dssp             THHHHSCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEECSCSCSS---HHHH-HHHHHHHHHTTCCEE
T ss_pred             HHHHhcCCCCCEEEEeCCcHHH--HHHHHHHHHcCCEEEEECCCcCC---HHHH-HHHHHHHHHcCCeEE
Confidence            5667765  8999999966544  5888999999999 554  2222   2344 567788999998764

>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*

Probab=86.58  E-value=0.18  Score=42.93  Aligned_cols=62  Identities=8%  Similarity=0.175  Sum_probs=43.0

Q ss_pred             HHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         119 ILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       119 L~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      ++++++++|+||.|+++...  ...+..++++|++.+=++...-.-.++.+.+.+.|++.|..+
T Consensus        54 ~d~lla~pD~VVe~A~~~av--~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l  115 (253)
T 1j5p_A           54 EFQVPSDVSTVVECASPEAV--KEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARV  115 (253)
T ss_dssp             SCCCCTTCCEEEECSCHHHH--HHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEE
T ss_pred             HHHHhhCCCEEEECCCHHHH--HHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeE
Confidence            34455689999999976522  356788999999988877432111333457788888888776

>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}

Probab=86.50  E-value=0.9  Score=38.71  Aligned_cols=59  Identities=14%  Similarity=0.101  Sum_probs=41.7

Q ss_pred             HHHHhhc--CcEEEeccccccccchHHHHHHHHcCCCEe-e--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAKK--CRVILNCVGPYTWYGEAVVKACIEAKTHHV-D--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~~--~dVVIN~aGPf~~~g~~VaeACieAGthYV-D--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++.  .|+|+.|..|...  ..++.+|+++|.|.+ .  ++-..   .+. .++-+.|+++|+.++
T Consensus        75 ~~~ll~~~~iD~V~i~tp~~~h--~~~~~~al~~Gk~V~~EKP~a~~~---~~~-~~l~~~a~~~~~~~~  138 (383)
T 3oqb_A           75 LDAALADKNDTMFFDAATTQAR--PGLLTQAINAGKHVYCEKPIATNF---EEA-LEVVKLANSKGVKHG  138 (383)
T ss_dssp             HHHHHHCSSCCEEEECSCSSSS--HHHHHHHHTTTCEEEECSCSCSSH---HHH-HHHHHHHHHTTCCEE
T ss_pred             HHHHhcCCCCCEEEECCCchHH--HHHHHHHHHCCCeEEEcCCCCCCH---HHH-HHHHHHHHHcCCeEE
Confidence            5667765  8999999876544  589999999999944 2  22222   343 567778899998653

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=86.38  E-value=1.5  Score=37.21  Aligned_cols=60  Identities=8%  Similarity=0.028  Sum_probs=43.1

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++  +.|+|+-|..|...  ..++.+|+++|.| +++  ++-+.+   +. .++-+.|+++|+.++
T Consensus        80 ~~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~aGk~Vl~EKP~a~~~~---ea-~~l~~~a~~~g~~~~  144 (350)
T 3rc1_A           80 GYPALLERDDVDAVYVPLPAVLH--AEWIDRALRAGKHVLAEKPLTTDRP---QA-ERLFAVARERGLLLM  144 (350)
T ss_dssp             SHHHHHTCTTCSEEEECCCGGGH--HHHHHHHHHTTCEEEEESSSCSSHH---HH-HHHHHHHHHTTCCEE
T ss_pred             CHHHHhcCCCCCEEEECCCcHHH--HHHHHHHHHCCCcEEEeCCCCCCHH---HH-HHHHHHHHHhCCEEE
Confidence            3566776  58999999865544  5888999999999 554  444433   33 466778899998764

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=86.31  E-value=1.5  Score=36.58  Aligned_cols=59  Identities=12%  Similarity=0.019  Sum_probs=43.1

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  +.|+|+-|..|...  ..++.+|+++|.| |+.  ++-+.   .+. +++-+.|+++|+.++
T Consensus        86 ~~ell~~~~iDaV~IatP~~~H--~~~a~~al~aGkhVl~EKPla~~~---~ea-~~l~~~a~~~g~~l~  149 (393)
T 4fb5_A           86 WRALIADPEVDVVSVTTPNQFH--AEMAIAALEAGKHVWCEKPMAPAY---ADA-ERMLATAERSGKVAA  149 (393)
T ss_dssp             HHHHHHCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEECSCSCSSH---HHH-HHHHHHHHHSSSCEE
T ss_pred             HHHHhcCCCCcEEEECCChHHH--HHHHHHHHhcCCeEEEccCCcccH---HHH-HHhhhhHHhcCCccc
Confidence            566775  47999999866655  4899999999999 766  33333   333 466778899998764

>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}

Probab=85.91  E-value=0.93  Score=38.36  Aligned_cols=61  Identities=11%  Similarity=0.110  Sum_probs=41.5

Q ss_pred             HHHHhh---cCcEEEeccccccccchHHHHHHHHcCCC-EeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK---KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~---~~dVVIN~aGPf~~~g~~VaeACieAGth-YVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++   +.|+|+.|..|...  ..++.+|+++|.| ++.=---.. ..+. .++-+.|+++|+.++
T Consensus        72 ~~~ll~~~~~vD~V~i~tp~~~H--~~~~~~al~aGkhVl~EKP~a~~-~~e~-~~l~~~a~~~g~~~~  136 (330)
T 4ew6_A           72 IEAMLDAEPSIDAVSLCMPPQYR--YEAAYKALVAGKHVFLEKPPGAT-LSEV-ADLEALANKQGASLF  136 (330)
T ss_dssp             HHHHHHHCTTCCEEEECSCHHHH--HHHHHHHHHTTCEEEECSSSCSS-HHHH-HHHHHHHHHHTCCEE
T ss_pred             HHHHHhCCCCCCEEEEeCCcHHH--HHHHHHHHHcCCcEEEeCCCCCC-HHHH-HHHHHHHHhcCCeEE
Confidence            455555   49999999865544  5999999999999 544211111 2344 567788999998664

>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}

Probab=85.86  E-value=1.3  Score=38.70  Aligned_cols=59  Identities=17%  Similarity=0.076  Sum_probs=42.4

Q ss_pred             HHHHhhc-------CcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAKK-------CRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~~-------~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++.       .|+|+-|..+...  ..++.+|+++|.| +++  ++-+.+   +. +++-+.|+++|+.++
T Consensus        97 ~~~ll~~~~~~~~~vD~V~I~tp~~~H--~~~~~~al~aGkhVl~EKPla~~~~---ea-~~l~~~a~~~g~~~~  165 (417)
T 3v5n_A           97 FKEMAIREAKLKNGIEAVAIVTPNHVH--YAAAKEFLKRGIHVICDKPLTSTLA---DA-KKLKKAADESDALFV  165 (417)
T ss_dssp             HHHHHHHHHHCTTCCSEEEECSCTTSH--HHHHHHHHTTTCEEEEESSSCSSHH---HH-HHHHHHHHHCSSCEE
T ss_pred             HHHHHhcccccCCCCcEEEECCCcHHH--HHHHHHHHhCCCeEEEECCCcCCHH---HH-HHHHHHHHHcCCEEE
Confidence            4556654       9999999866544  5899999999999 666  433333   33 456678899998764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=85.73  E-value=1.3  Score=42.51  Aligned_cols=49  Identities=10%  Similarity=0.173  Sum_probs=36.8

Q ss_pred             eEEeeeecccccc----------cCCCCCCEEEEeCCCHHHHHHHhhcC------cEEEeccccc
Q psy1304          88 RLGLLGARDCLYR----------ENLIDIPIIIADLKNESSILIMAKKC------RVILNCVGPY  136 (184)
Q Consensus        88 ~iaLAGrr~~lg~----------~~~~~v~~v~vDv~D~~sL~a~l~~~------dVVIN~aGPf  136 (184)
                      ++.+.+|+.....          ..-.++.++.||+.|+++++++++.+      |+|||+||-.
T Consensus       558 ~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id~lVnnAGv~  622 (795)
T 3slk_A          558 NLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLTAVVHAAGVL  622 (795)
T ss_dssp             EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCC
T ss_pred             EEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCCCEEEEECCCcC
Confidence            5888888732111          01245789999999999999999864      8999999854

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=85.56  E-value=0.021  Score=47.46  Aligned_cols=112  Identities=9%  Similarity=-0.048  Sum_probs=58.8

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---CCCC-CCEEEEeCCCHHHHHHHhhcCc
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---NLID-IPIIIADLKNESSILIMAKKCR  127 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~~-v~~v~vDv~D~~sL~a~l~~~d  127 (184)
                      .++||+..|-|-=--||.    ++.+|++..    .+|.+..|+.+...+   .... ..+   ++.+.+++.+  .++|
T Consensus       116 ~l~~k~vlViGaGg~g~a----~a~~L~~~G----~~V~v~~R~~~~~~~la~~~~~~~~~---~~~~~~~~~~--~~~D  182 (271)
T 1nyt_A          116 IRPGLRILLIGAGGASRG----VLLPLLSLD----CAVTITNRTVSRAEELAKLFAHTGSI---QALSMDELEG--HEFD  182 (271)
T ss_dssp             CCTTCEEEEECCSHHHHH----HHHHHHHTT----CEEEEECSSHHHHHHHHHHTGGGSSE---EECCSGGGTT--CCCS
T ss_pred             CcCCCEEEEECCcHHHHH----HHHHHHHcC----CEEEEEECCHHHHHHHHHHhhccCCe---eEecHHHhcc--CCCC
Confidence            356777777763111122    444555544    467778776432211   1110 022   2233233322  5899


Q ss_pred             EEEeccccccccc-hHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCe
Q psy1304         128 VILNCVGPYTWYG-EAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQ  181 (184)
Q Consensus       128 VVIN~aGPf~~~g-~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~  181 (184)
                      +||||+|...... .++-..++..|..++|+.-.+.-+     .+.+.|+++|..
T Consensus       183 ivVn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~t-----~~~~~a~~~G~~  232 (271)
T 1nyt_A          183 LIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKT-----PFLAWCEQRGSK  232 (271)
T ss_dssp             EEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCC-----HHHHHHHHTTCC
T ss_pred             EEEECCCCCCCCCCCCCCHHHcCCCCEEEEeccCCcCC-----HHHHHHHHcCCC
Confidence            9999997543211 112233456788899997654322     345678888875

>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}

Probab=85.40  E-value=1.4  Score=38.00  Aligned_cols=60  Identities=13%  Similarity=0.029  Sum_probs=42.4

Q ss_pred             HHHHHhhc-------CcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAKK-------CRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~~-------~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++.       .|+|+-|..+...  ..++.+|+++|.| +++  ++-+.+   +. +++-+.|+++|+.++
T Consensus        71 ~~~~ll~~~~~~~~~vD~V~i~tp~~~H--~~~~~~al~aGkhVl~EKPla~~~~---ea-~~l~~~a~~~g~~~~  140 (398)
T 3dty_A           71 DYLSMFEQEARRADGIQAVSIATPNGTH--YSITKAALEAGLHVVCEKPLCFTVE---QA-ENLRELSHKHNRIVG  140 (398)
T ss_dssp             SHHHHHHHHTTCTTCCSEEEEESCGGGH--HHHHHHHHHTTCEEEECSCSCSCHH---HH-HHHHHHHHHTTCCEE
T ss_pred             CHHHHHhcccccCCCCCEEEECCCcHHH--HHHHHHHHHCCCeEEEeCCCcCCHH---HH-HHHHHHHHHcCCeEE
Confidence            35556654       9999999866644  4899999999999 664  333333   33 466678888998764

>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}

Probab=85.30  E-value=2  Score=36.48  Aligned_cols=61  Identities=11%  Similarity=-0.017  Sum_probs=43.8

Q ss_pred             HHHHhh--c-CcEEEeccccccccchHHHHHHHHcCCC-EeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--K-CRVILNCVGPYTWYGEAVVKACIEAKTH-HVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~-~dVVIN~aGPf~~~g~~VaeACieAGth-YVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++.+  . +|++|.++.|..  -..+++.|+++|++ -|=++.-.+- .+. .++.+.|++.|+.++
T Consensus        62 l~el~~~~~~~DvaIi~vp~~~--~~~~v~ea~~~Gi~~vVi~t~G~~~-~~~-~~l~~~A~~~gi~vi  126 (297)
T 2yv2_A           62 VKEALAEHPEINTSIVFVPAPF--APDAVYEAVDAGIRLVVVITEGIPV-HDT-MRFVNYARQKGATII  126 (297)
T ss_dssp             HHHHHHHCTTCCEEEECCCGGG--HHHHHHHHHHTTCSEEEECCCCCCH-HHH-HHHHHHHHHHTCEEE
T ss_pred             HHHHhhcCCCCCEEEEecCHHH--HHHHHHHHHHCCCCEEEEECCCCCH-HHH-HHHHHHHHHcCCEEE
Confidence            555555  5 999999997653  36999999999999 5544533221 233 578889999998765

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=85.27  E-value=0.61  Score=41.64  Aligned_cols=70  Identities=9%  Similarity=-0.033  Sum_probs=43.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccc-----c---------
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTW-----Y---------  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~-----~---------  139 (184)
                      ++.+|.+..    -+|....|+...       .+.+.+|+.|.  +.+.++++|+||||+|+...     .         
T Consensus       163 l~~~L~~~G----~~V~~l~R~~~~-------~~~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~N  229 (516)
T 3oh8_A          163 LTAQLQTGG----HEVIQLVRKEPK-------PGKRFWDPLNP--ASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESR  229 (516)
T ss_dssp             HHHHHHHTT----CEEEEEESSSCC-------TTCEECCTTSC--CTTTTTTCSEEEECCCC-----CCGGGHHHHHHHT
T ss_pred             HHHHHHHCC----CEEEEEECCCCC-------ccceeecccch--hHHhcCCCCEEEECCCCccccccchhHHHHHHHHH
Confidence            666676553    455555555432       23366777653  56778899999999997521     0         


Q ss_pred             ---chHHHHH-HHHcCC-CEee
Q psy1304         140 ---GEAVVKA-CIEAKT-HHVD  156 (184)
Q Consensus       140 ---g~~VaeA-CieAGt-hYVD  156 (184)
                         -..++++ |...|+ ++|-
T Consensus       230 v~gt~~ll~a~a~~~~~~r~V~  251 (516)
T 3oh8_A          230 VLPTKFLAELVAESTQCTTMIS  251 (516)
T ss_dssp             HHHHHHHHHHHHHCSSCCEEEE
T ss_pred             HHHHHHHHHHHHhcCCCCEEEE
Confidence               1568888 666676 3553

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=85.25  E-value=1.7  Score=37.43  Aligned_cols=59  Identities=14%  Similarity=0.050  Sum_probs=42.6

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  +.|+|+.|..|...  ..++.+|+++|.| |+.  ++-+.+   +. +++-+.|+++|+.++
T Consensus        88 ~~~ll~~~~vD~V~I~tp~~~H--~~~~~~al~aGkhVl~EKP~a~~~~---ea-~~l~~~a~~~g~~~~  151 (412)
T 4gqa_A           88 WRELVNDPQVDVVDITSPNHLH--YTMAMAAIAAGKHVYCEKPLAVNEQ---QA-QEMAQAARRAGVKTM  151 (412)
T ss_dssp             HHHHHHCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEEESCSCSSHH---HH-HHHHHHHHHHTCCEE
T ss_pred             HHHHhcCCCCCEEEECCCcHHH--HHHHHHHHHcCCCeEeecCCcCCHH---HH-HHHHHHHHHhCCeee
Confidence            566776  58999999866555  4899999999999 676  333333   33 456678888888764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=85.04  E-value=0.3  Score=39.29  Aligned_cols=83  Identities=13%  Similarity=0.095  Sum_probs=51.4

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc---cccCC------CCCCEEEEeCCCH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL---YRENL------IDIPIIIADLKNE  116 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l---g~~~~------~~v~~v~vDv~D~  116 (184)
                      .|.+.++|-|+-                ++.+|++..    -++....|+...   .....      .+++++.+|+.  
T Consensus        11 lVtGatG~iG~~----------------l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--   68 (321)
T 3vps_A           11 LITGGAGFIGGH----------------LARALVASG----EEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS--   68 (321)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHTT----CCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT--
T ss_pred             EEECCCChHHHH----------------HHHHHHHCC----CEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc--
Confidence            356777888877                778888664    345555554431   11011      23445555543  


Q ss_pred             HHHHHHhhcCcEEEeccccccc---------------cchHHHHHHHHcCC-CEeeCC
Q psy1304         117 SSILIMAKKCRVILNCVGPYTW---------------YGEAVVKACIEAKT-HHVDIT  158 (184)
Q Consensus       117 ~sL~a~l~~~dVVIN~aGPf~~---------------~g~~VaeACieAGt-hYVDlt  158 (184)
                              ++|+||||+|+...               ....++++|.++|+ ++|-++
T Consensus        69 --------~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~S  118 (321)
T 3vps_A           69 --------DVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGS  118 (321)
T ss_dssp             --------TEEEEEECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             --------cCCEEEECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEec
Confidence                    89999999996531               11579999999996 465443

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=84.62  E-value=1.5  Score=36.72  Aligned_cols=59  Identities=7%  Similarity=-0.099  Sum_probs=41.9

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  +.|+|+-|..|...  .+++.+|+++|.| |+.  ++-+.+   +. +++-+.|+++|+.++
T Consensus        78 ~~ell~~~~iDaV~I~tP~~~H--~~~~~~al~aGkhVl~EKPla~~~~---ea-~~l~~~a~~~~~~l~  141 (350)
T 4had_A           78 YEEMLASDVIDAVYIPLPTSQH--IEWSIKAADAGKHVVCEKPLALKAG---DI-DAVIAARDRNKVVVT  141 (350)
T ss_dssp             HHHHHHCSSCSEEEECSCGGGH--HHHHHHHHHTTCEEEECSCCCSSGG---GG-HHHHHHHHHHTCCEE
T ss_pred             HHHHhcCCCCCEEEEeCCCchh--HHHHHHHHhcCCEEEEeCCcccchh---hH-HHHHHHHHHcCCcee
Confidence            566775  48999999866554  4899999999999 665  333333   33 455677888887764

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=84.38  E-value=1  Score=39.53  Aligned_cols=37  Identities=5%  Similarity=0.016  Sum_probs=30.7

Q ss_pred             hhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         123 AKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       123 l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      ++++|+|+.|.|-+.  ....+..++++|+.-||++++.
T Consensus        77 ~~~vDvvf~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~  113 (359)
T 4dpk_A           77 MDDVDIIFSPLPQGA--AGPVEEQFAKEGFPVISNSPDH  113 (359)
T ss_dssp             CTTCCEEEECCCTTT--HHHHHHHHHHTTCEEEECSSTT
T ss_pred             hcCCCEEEECCChHH--HHHHHHHHHHCCCEEEEcCCCc
Confidence            379999999997553  3578888999999999999864

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=84.38  E-value=1  Score=39.53  Aligned_cols=37  Identities=5%  Similarity=0.016  Sum_probs=30.7

Q ss_pred             hhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         123 AKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       123 l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      ++++|+|+.|.|-+.  ....+..++++|+.-||++++.
T Consensus        77 ~~~vDvvf~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~  113 (359)
T 4dpl_A           77 MDDVDIIFSPLPQGA--AGPVEEQFAKEGFPVISNSPDH  113 (359)
T ss_dssp             CTTCCEEEECCCTTT--HHHHHHHHHHTTCEEEECSSTT
T ss_pred             hcCCCEEEECCChHH--HHHHHHHHHHCCCEEEEcCCCc
Confidence            379999999997553  3578888999999999999864

>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*

Probab=84.37  E-value=1.3  Score=39.11  Aligned_cols=59  Identities=10%  Similarity=0.019  Sum_probs=41.8

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  +.|+|+-|..|...  ..++.+|+++|.| |++  ++-+.   .+. .++.+.|+++|+.++
T Consensus       142 ~~~ll~~~~vD~V~iatp~~~h--~~~~~~al~aGk~Vl~EKPla~~~---~e~-~~l~~~a~~~g~~~~  205 (433)
T 1h6d_A          142 FDKIAKDPKIDAVYIILPNSLH--AEFAIRAFKAGKHVMCEKPMATSV---ADC-QRMIDAAKAANKKLM  205 (433)
T ss_dssp             GGGGGGCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEECSSCCSSH---HHH-HHHHHHHHHHTCCEE
T ss_pred             HHHHhcCCCCCEEEEcCCchhH--HHHHHHHHHCCCcEEEcCCCCCCH---HHH-HHHHHHHHHhCCeEE
Confidence            345565  68999999966544  5888899999999 665  33333   333 567778888888764

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=84.27  E-value=0.75  Score=34.77  Aligned_cols=110  Identities=15%  Similarity=0.074  Sum_probs=58.4

Q ss_pred             ccCccccceeeeccc-ccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcCc
Q psy1304          49 ESQPFRGQTLSVQDK-IRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCR  127 (184)
Q Consensus        49 ~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~d  127 (184)
                      +|.-|+=+.++|.|- -+||+-. -+++.+|.+..    .+  +..++....  .....+     +  ..++.++.+..|
T Consensus         8 ~~~l~~p~~IavIGaS~~~g~~G-~~~~~~L~~~G----~~--V~~vnp~~~--~i~G~~-----~--~~s~~el~~~vD   71 (138)
T 1y81_A            8 GSNSKEFRKIALVGASKNPAKYG-NIILKDLLSKG----FE--VLPVNPNYD--EIEGLK-----C--YRSVRELPKDVD   71 (138)
T ss_dssp             ------CCEEEEETCCSCTTSHH-HHHHHHHHHTT----CE--EEEECTTCS--EETTEE-----C--BSSGGGSCTTCC
T ss_pred             cccccCCCeEEEEeecCCCCCHH-HHHHHHHHHCC----CE--EEEeCCCCC--eECCee-----e--cCCHHHhCCCCC
Confidence            566777777888772 1122211 14666666543    23  444443321  111111     1  112344455799


Q ss_pred             EEEeccccccccchHHHHHHHHcCCC--EeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         128 VILNCVGPYTWYGEAVVKACIEAKTH--HVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       128 VVIN~aGPf~~~g~~VaeACieAGth--YVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +||-|+.|  ..-..+++.|++.|+.  .++.+++       ..++.+.|+++|+.++
T Consensus        72 lvii~vp~--~~v~~v~~~~~~~g~~~i~~~~~~~-------~~~l~~~a~~~Gi~~i  120 (138)
T 1y81_A           72 VIVFVVPP--KVGLQVAKEAVEAGFKKLWFQPGAE-------SEEIRRFLEKAGVEYS  120 (138)
T ss_dssp             EEEECSCH--HHHHHHHHHHHHTTCCEEEECTTSC-------CHHHHHHHHHHTCEEE
T ss_pred             EEEEEeCH--HHHHHHHHHHHHcCCCEEEEcCccH-------HHHHHHHHHHCCCEEE
Confidence            99999854  4457888889999988  4555443       1456777888888775

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5

Probab=84.07  E-value=2.4  Score=35.25  Aligned_cols=54  Identities=6%  Similarity=-0.018  Sum_probs=39.6

Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      .++|+|+.|+.|...  ..++.+|+++|.| +++  ++-+..   +. .++.+.|+++|+.++
T Consensus        62 ~~~D~V~i~tp~~~h--~~~~~~al~~Gk~V~~EKP~~~~~~---~~-~~l~~~a~~~g~~~~  118 (323)
T 1xea_A           62 YGVDAVMIHAATDVH--STLAAFFLHLGIPTFVDKPLAASAQ---EC-ENLYELAEKHHQPLY  118 (323)
T ss_dssp             GCCSEEEECSCGGGH--HHHHHHHHHTTCCEEEESCSCSSHH---HH-HHHHHHHHHTTCCEE
T ss_pred             cCCCEEEEECCchhH--HHHHHHHHHCCCeEEEeCCCcCCHH---HH-HHHHHHHHhcCCeEE
Confidence            689999999976654  4888899999999 565  333332   33 467778889998764

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=83.70  E-value=1.2  Score=39.42  Aligned_cols=90  Identities=13%  Similarity=0.097  Sum_probs=55.9

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhC-CCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADA-PTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~-~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .|.+-+++.|+.                +..-|++. .|.  ..+.+..-++..|.. .....+...-+++. +    .+
T Consensus         6 aIvGATG~vG~e----------------LlrlL~~~~~p~--~el~~~as~~saG~~~~~~~~~~~~~~~~~-~----~~   62 (366)
T 3pwk_A            6 AVVGATGAVGAQ----------------MIKMLEESTLPI--DKIRYLASARSAGKSLKFKDQDITIEETTE-T----AF   62 (366)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHTCCCCE--EEEEEEECTTTTTCEEEETTEEEEEEECCT-T----TT
T ss_pred             EEECCCChHHHH----------------HHHHHhcCCCCc--EEEEEEEccccCCCcceecCCCceEeeCCH-H----Hh
Confidence            356778888888                66667753 466  555554322222211 01112333333332 2    24


Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCC
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGE  160 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE  160 (184)
                      +++|+|+-|.|.+.  ....+..++++|+.-||++++
T Consensus        63 ~~~Dvvf~a~~~~~--s~~~a~~~~~~G~~vIDlSa~   97 (366)
T 3pwk_A           63 EGVDIALFSAGSST--SAKYAPYAVKAGVVVVDNTSY   97 (366)
T ss_dssp             TTCSEEEECSCHHH--HHHHHHHHHHTTCEEEECSST
T ss_pred             cCCCEEEECCChHh--HHHHHHHHHHCCCEEEEcCCc
Confidence            79999999997443  357888889999999999985

>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}

Probab=83.56  E-value=1.4  Score=37.63  Aligned_cols=91  Identities=12%  Similarity=-0.016  Sum_probs=54.2

Q ss_pred             CCCCCceeE-EeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhc--CcEEEeccccccccchHHHHHHHHcCCC-Eee
Q psy1304          81 APTSNLTRL-GLLGARDCLYRENLIDIPIIIADLKNESSILIMAKK--CRVILNCVGPYTWYGEAVVKACIEAKTH-HVD  156 (184)
Q Consensus        81 ~~~~~~~~i-aLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~g~~VaeACieAGth-YVD  156 (184)
                      ..|+  .++ +++.++.+.............+ ..   +++++++.  .|+|+.|..|...  ..++.+|+++|.| +++
T Consensus        27 ~~~~--~~l~av~d~~~~~~~~~a~~~~~~~~-~~---~~~~ll~~~~vD~V~i~tp~~~H--~~~~~~al~aGkhVl~E   98 (359)
T 3m2t_A           27 QMQD--IRIVAACDSDLERARRVHRFISDIPV-LD---NVPAMLNQVPLDAVVMAGPPQLH--FEMGLLAMSKGVNVFVE   98 (359)
T ss_dssp             TCTT--EEEEEEECSSHHHHGGGGGTSCSCCE-ES---SHHHHHHHSCCSEEEECSCHHHH--HHHHHHHHHTTCEEEEC
T ss_pred             hCCC--cEEEEEEcCCHHHHHHHHHhcCCCcc-cC---CHHHHhcCCCCCEEEEcCCcHHH--HHHHHHHHHCCCeEEEE
Confidence            4466  665 4777655433222222211110 12   35667764  6999999865544  4888999999999 665


Q ss_pred             --CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         157 --ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       157 --ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                        ++-+.+   +. .++-+.|+++|+.++
T Consensus        99 KPla~~~~---e~-~~l~~~a~~~g~~~~  123 (359)
T 3m2t_A           99 KPPCATLE---EL-ETLIDAARRSDVVSG  123 (359)
T ss_dssp             SCSCSSHH---HH-HHHHHHHHHHTCCEE
T ss_pred             CCCcCCHH---HH-HHHHHHHHHcCCEEE
Confidence              333333   33 456678888888664

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=83.48  E-value=0.16  Score=44.44  Aligned_cols=39  Identities=13%  Similarity=0.147  Sum_probs=31.4

Q ss_pred             HHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         120 LIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       120 ~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      ++.++++|+|+.|+|.+..  ...+..+ ++|++.||++++.
T Consensus        77 ~~~~~~vDvVf~atp~~~s--~~~a~~~-~aG~~VId~sa~~  115 (359)
T 1xyg_A           77 DADFSTVDAVFCCLPHGTT--QEIIKEL-PTALKIVDLSADF  115 (359)
T ss_dssp             GCCGGGCSEEEECCCTTTH--HHHHHTS-CTTCEEEECSSTT
T ss_pred             hhHhcCCCEEEEcCCchhH--HHHHHHH-hCCCEEEECCccc
Confidence            3356799999999976643  5777888 9999999999864

>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}

Probab=83.42  E-value=2.1  Score=36.38  Aligned_cols=59  Identities=8%  Similarity=0.021  Sum_probs=42.2

Q ss_pred             HHHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         118 SILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       118 sL~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      +++++++  +.|+|+.|..|...  ..++.+|+++|.| +++  ++-+.+   +. .++-+.|+++|+.+
T Consensus        78 ~~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~aGk~Vl~EKPla~~~~---e~-~~l~~~a~~~g~~~  141 (357)
T 3ec7_A           78 DYHDLINDKDVEVVIITASNEAH--ADVAVAALNANKYVFCEKPLAVTAA---DC-QRVIEAEQKNGKRM  141 (357)
T ss_dssp             SHHHHHHCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEEESSSCSSHH---HH-HHHHHHHHHHTSCC
T ss_pred             CHHHHhcCCCCCEEEEcCCcHHH--HHHHHHHHHCCCCEEeecCccCCHH---HH-HHHHHHHHHhCCeE
Confidence            3566776  58999999866544  5889999999999 655  444433   33 45667888888754

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=83.17  E-value=2  Score=36.27  Aligned_cols=61  Identities=10%  Similarity=-0.125  Sum_probs=44.5

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-EeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++.+  .+|++|.++.|..  -..+++.|++.|++ -+=++.-.+- .+. .++.+.|++.|+.++
T Consensus        56 l~el~~~~~~Dv~Ii~vp~~~--~~~~~~ea~~~Gi~~vVi~t~G~~~-~~~-~~l~~~a~~~gi~vi  119 (288)
T 1oi7_A           56 VKEAVAHHEVDASIIFVPAPA--AADAALEAAHAGIPLIVLITEGIPT-LDM-VRAVEEIKALGSRLI  119 (288)
T ss_dssp             HHHHHHHSCCSEEEECCCHHH--HHHHHHHHHHTTCSEEEECCSCCCH-HHH-HHHHHHHHHHTCEEE
T ss_pred             HHHHhhcCCCCEEEEecCHHH--HHHHHHHHHHCCCCEEEEECCCCCH-HHH-HHHHHHHHHcCCEEE
Confidence            566666  8999999997653  36899999999999 5555533221 222 578889999998765

>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}

Probab=83.15  E-value=1.7  Score=37.06  Aligned_cols=60  Identities=7%  Similarity=-0.023  Sum_probs=43.2

Q ss_pred             HHHHHhhc--CcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAKK--CRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~~--~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++++++.  .|+|+-|..|...  ..++.+|+++|.| +++  ++-+.   .+. +++-+.|+++|+.++
T Consensus        79 ~~~~ll~~~~vD~V~I~tp~~~H--~~~~~~al~aGkhVl~EKPla~~~---~ea-~~l~~~a~~~g~~l~  143 (361)
T 3u3x_A           79 TAEEILEDENIGLIVSAAVSSER--AELAIRAMQHGKDVLVDKPGMTSF---DQL-AKLRRVQAETGRIFS  143 (361)
T ss_dssp             CHHHHHTCTTCCEEEECCCHHHH--HHHHHHHHHTTCEEEEESCSCSSH---HHH-HHHHHHHHTTCCCEE
T ss_pred             CHHHHhcCCCCCEEEEeCChHHH--HHHHHHHHHCCCeEEEeCCCCCCH---HHH-HHHHHHHHHcCCEEE
Confidence            45677765  8999999865544  5889999999999 766  33333   333 466778889998764

>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}

Probab=82.66  E-value=3.5  Score=35.64  Aligned_cols=56  Identities=7%  Similarity=0.055  Sum_probs=41.7

Q ss_pred             cCcEEEeccccccc--cchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCee
Q psy1304         125 KCRVILNCVGPYTW--YGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQK  182 (184)
Q Consensus       125 ~~dVVIN~aGPf~~--~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~I  182 (184)
                      +.|+||.|.++...  .+...+..|+++|.|-|--+= ..+.... .++.+.|+++|+.+
T Consensus        82 ~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK-~~la~~~-~eL~~lA~~~g~~~  139 (325)
T 3ing_A           82 AADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANK-SGLANKW-HDIMDSANQNSKYI  139 (325)
T ss_dssp             CCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCC-HHHHHHH-HHHHHHHHHHTCCE
T ss_pred             CCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCc-hhHHHHH-HHHHHHHHHcCCeE
Confidence            58999999987632  235789999999999886543 2333444 78999999999865

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=81.78  E-value=1.2  Score=39.04  Aligned_cols=90  Identities=11%  Similarity=0.060  Sum_probs=56.9

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhC-CCCCceeEEeeeecccccccC-CCCCCEEEEeCCCHHHHHHHh
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADA-PTSNLTRLGLLGARDCLYREN-LIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~-~~~~~~~iaLAGrr~~lg~~~-~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .|.+.+++.|+.                +..-|+++ .|.  ..+.+..-++..|..- ....+...-++++ +    .+
T Consensus         5 aIvGatG~vG~e----------------l~~lL~~h~fp~--~el~~~~s~~~aG~~~~~~~~~~~~~~~~~-~----~~   61 (344)
T 3tz6_A            5 GIVGATGQVGQV----------------MRTLLDERDFPA--SAVRFFASARSQGRKLAFRGQEIEVEDAET-A----DP   61 (344)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHTTCCE--EEEEEEECTTTSSCEEEETTEEEEEEETTT-S----CC
T ss_pred             EEECCCChHHHH----------------HHHHHHhCCCCc--eEEEEEECcccCCCceeecCCceEEEeCCH-H----Hh
Confidence            356778888887                66777754 477  6666554233222210 1112333334432 2    24


Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCC
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGE  160 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE  160 (184)
                      +++|+|+.|.|.+.  ....+..++++|+.-||++++
T Consensus        62 ~~~Dvvf~a~~~~~--s~~~a~~~~~~G~~vID~Sa~   96 (344)
T 3tz6_A           62 SGLDIALFSAGSAM--SKVQAPRFAAAGVTVIDNSSA   96 (344)
T ss_dssp             TTCSEEEECSCHHH--HHHHHHHHHHTTCEEEECSST
T ss_pred             ccCCEEEECCChHH--HHHHHHHHHhCCCEEEECCCc
Confidence            79999999997543  357888889999999999985

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=81.70  E-value=0.58  Score=35.64  Aligned_cols=58  Identities=14%  Similarity=0.095  Sum_probs=37.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----------CCCCCCEEEEeCCCH--HHHHHHhh------cCcEEEecccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----------NLIDIPIIIADLKNE--SSILIMAK------KCRVILNCVGP  135 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----------~~~~v~~v~vDv~D~--~sL~a~l~------~~dVVIN~aGP  135 (184)
                      ++..|++..    .++.+..|++.....          ...+...+.+|+.++  ++++++++      +.|++|||+|-
T Consensus        32 ~a~~La~~G----a~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnnAgg  107 (157)
T 3gxh_A           32 QFSLLKQAG----VDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHCLAN  107 (157)
T ss_dssp             HHHHHHHTT----CCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEECSBS
T ss_pred             HHHHHHHcC----CCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence            667777764    667777665432110          012344566799998  88877764      34999999984

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=81.41  E-value=0.77  Score=33.23  Aligned_cols=75  Identities=12%  Similarity=-0.024  Sum_probs=49.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHH-hhcCcEEEeccccccccchHHHHHHHHcC
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIM-AKKCRVILNCVGPYTWYGEAVVKACIEAK  151 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~-l~~~dVVIN~aGPf~~~g~~VaeACieAG  151 (184)
                      ++..|.+..    .++.+-.++.+.-.. ......++..|..|++.+.++ ++++|+||.|.| ....+..++..+.+.|
T Consensus        21 la~~L~~~g----~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~-~~~~n~~~~~~a~~~~   95 (141)
T 3llv_A           21 LVRELTAAG----KKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS-DDEFNLKILKALRSVS   95 (141)
T ss_dssp             HHHHHHHTT----CCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS-CHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHCC----CeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC-CHHHHHHHHHHHHHhC
Confidence            566666553    455555555432111 113577888999999999877 678999999997 3344566777777777


Q ss_pred             CC
Q psy1304         152 TH  153 (184)
Q Consensus       152 th  153 (184)
                      ..
T Consensus        96 ~~   97 (141)
T 3llv_A           96 DV   97 (141)
T ss_dssp             CC
T ss_pred             Cc
Confidence            44

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=81.26  E-value=1  Score=38.97  Aligned_cols=37  Identities=11%  Similarity=0.097  Sum_probs=31.5

Q ss_pred             hhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         123 AKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       123 l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      ++++|+|+.|.|.+.  ....+.+++++|+.-||+++..
T Consensus        66 ~~~~DvV~~a~g~~~--s~~~a~~~~~aG~kvId~Sa~~  102 (340)
T 2hjs_A           66 FSSVGLAFFAAAAEV--SRAHAERARAAGCSVIDLSGAL  102 (340)
T ss_dssp             GGGCSEEEECSCHHH--HHHHHHHHHHTTCEEEETTCTT
T ss_pred             hcCCCEEEEcCCcHH--HHHHHHHHHHCCCEEEEeCCCC
Confidence            579999999998664  3688899999999999999764

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=81.05  E-value=1.5  Score=38.19  Aligned_cols=90  Identities=13%  Similarity=0.114  Sum_probs=57.0

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc---cccccC------C-C--CCCEEEEeC
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD---CLYREN------L-I--DIPIIIADL  113 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~---~lg~~~------~-~--~v~~v~vDv  113 (184)
                      .|.+.+++.|+.                +...|..+ |+  ..+.....++   ..|..-      . +  ++.+...  
T Consensus         8 ~IvGatG~vG~~----------------l~~~L~~~-p~--~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--   66 (337)
T 3dr3_A            8 LIVGASGYAGAE----------------LVTYVNRH-PH--MNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--   66 (337)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHC-TT--EEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--
T ss_pred             EEECCCChHHHH----------------HHHHHHhC-CC--CcEEEEEecCchhhcCCchHHhCccccCccceeEecc--
Confidence            456778888887                66767754 66  6666554433   333210      1 1  2333222  


Q ss_pred             CCHHHHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         114 KNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       114 ~D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      .|.+   ++++++|+|+-|.|.+.  ....+..++++|+.-||++++.
T Consensus        67 ~~~~---~~~~~~Dvvf~a~p~~~--s~~~~~~~~~~g~~vIDlSa~f  109 (337)
T 3dr3_A           67 SDIS---EFSPGVDVVFLATAHEV--SHDLAPQFLEAGCVVFDLSGAF  109 (337)
T ss_dssp             SSGG---GTCTTCSEEEECSCHHH--HHHHHHHHHHTTCEEEECSSTT
T ss_pred             CCHH---HHhcCCCEEEECCChHH--HHHHHHHHHHCCCEEEEcCCcc
Confidence            1222   34479999999987443  3678888999999999999864

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=80.97  E-value=0.015  Score=48.56  Aligned_cols=59  Identities=10%  Similarity=0.068  Sum_probs=36.7

Q ss_pred             HHHhhcCcEEEeccccccccc---hHH-HHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         120 LIMAKKCRVILNCVGPYTWYG---EAV-VKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       120 ~a~l~~~dVVIN~aGPf~~~g---~~V-aeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      .+.+.++|+||||+|......   .++ -..++..|...+|+.=.+..+     .+.+.|+++|..++
T Consensus       188 ~~~~~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p~~t-----~ll~~a~~~G~~~~  250 (287)
T 1nvt_A          188 DVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLET-----VLLKEAKKVNAKTI  250 (287)
T ss_dssp             TCCCTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSC-----HHHHHHHTTTCEEE
T ss_pred             HHhhCCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCCccC-----HHHHHHHHCCCEEe
Confidence            345678999999998543211   122 234667788899997543221     24457888887654

>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1

Probab=80.67  E-value=1.8  Score=37.42  Aligned_cols=40  Identities=15%  Similarity=0.156  Sum_probs=33.4

Q ss_pred             HHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCC
Q psy1304         119 ILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGE  160 (184)
Q Consensus       119 L~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE  160 (184)
                      .++++.++|+|+.|.|++..  ...++.++++|++-+|.+++
T Consensus        72 ~~~~~~~vDvV~~atp~~~~--~~~a~~~l~aG~~VId~sp~  111 (337)
T 1cf2_P           72 VDDMLDEADIVIDCTPEGIG--AKNLKMYKEKGIKAIFQGGE  111 (337)
T ss_dssp             HHHHHHTCSEEEECCSTTHH--HHHHHHHHHHTCCEEECTTS
T ss_pred             HHHHhcCCCEEEECCCchhh--HHHHHHHHHcCCEEEEecCC
Confidence            44556799999999988754  46788999999999999986

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=80.63  E-value=1.1  Score=38.61  Aligned_cols=90  Identities=14%  Similarity=0.038  Sum_probs=54.9

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCC-CCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAP-TSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~-~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      |.+.+++.|+.                +...|...+ |+  +.+.....++..|.. .....++...|. |++    .++
T Consensus         8 I~GAtG~iG~~----------------llr~L~~~~~p~--~elv~i~s~~~~G~~~~~~~~~i~~~~~-~~~----~~~   64 (336)
T 2r00_A            8 IFGATGAVGET----------------MLEVLQEREFPV--DELFLLASERSEGKTYRFNGKTVRVQNV-EEF----DWS   64 (336)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTTCCE--EEEEEEECTTTTTCEEEETTEEEEEEEG-GGC----CGG
T ss_pred             EECCCCHHHHH----------------HHHHHhcCCCCC--EEEEEEECCCCCCCceeecCceeEEecC-ChH----Hhc
Confidence            45667777776                667777553 66  655544322222211 011122222333 222    347


Q ss_pred             cCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         125 KCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       125 ~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      ++|+|+.|.|-+.  ....+.+++++|+.-||++++.
T Consensus        65 ~vDvVf~a~g~~~--s~~~a~~~~~~G~~vId~s~~~   99 (336)
T 2r00_A           65 QVHIALFSAGGEL--SAKWAPIAAEAGVVVIDNTSHF   99 (336)
T ss_dssp             GCSEEEECSCHHH--HHHHHHHHHHTTCEEEECSSTT
T ss_pred             CCCEEEECCCchH--HHHHHHHHHHcCCEEEEcCCcc
Confidence            8999999998663  4688889999999999999873

>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A

Probab=80.43  E-value=2.5  Score=37.23  Aligned_cols=97  Identities=11%  Similarity=0.023  Sum_probs=60.7

Q ss_pred             hhhhhhhCCCCCceeE-EeeeecccccccCCC--CCC-EEEEeCCCHHHHHHHhh--cCcEEEeccccccccchHHHHHH
Q psy1304          74 PSAYKADAPTSNLTRL-GLLGARDCLYRENLI--DIP-IIIADLKNESSILIMAK--KCRVILNCVGPYTWYGEAVVKAC  147 (184)
Q Consensus        74 ~~~~La~~~~~~~~~i-aLAGrr~~lg~~~~~--~v~-~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~g~~VaeAC  147 (184)
                      .+.+|.+.+|+  .+| +++.++.+.......  .++ ....  .   +++++++  +.|+|+.|..+...  ..++.+|
T Consensus        39 ~~~~l~~~~~~--~~lvav~d~~~~~~~~~a~~~g~~~~~~~--~---~~~~ll~~~~vD~V~i~tp~~~H--~~~~~~a  109 (438)
T 3btv_A           39 HYPAILQLSSQ--FQITALYSPKIETSIATIQRLKLSNATAF--P---TLESFASSSTIDMIVIAIQVASH--YEVVMPL  109 (438)
T ss_dssp             HHHHHHHTTTT--EEEEEEECSSHHHHHHHHHHTTCTTCEEE--S---SHHHHHHCSSCSEEEECSCHHHH--HHHHHHH
T ss_pred             HHHHHHhcCCC--eEEEEEEeCCHHHHHHHHHHcCCCcceee--C---CHHHHhcCCCCCEEEEeCCcHHH--HHHHHHH
Confidence            56667766577  776 677665543221111  111 1111  2   3566776  58999999966544  5888899


Q ss_pred             HHcC------CC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         148 IEAK------TH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       148 ieAG------th-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +++|      .| |++  ++-+.+   +. .++-+.|+++|+.++
T Consensus       110 l~aG~~~~~~khVl~EKP~a~~~~---e~-~~l~~~a~~~g~~~~  150 (438)
T 3btv_A          110 LEFSKNNPNLKYLFVEWALACSLD---QA-ESIYKAAAERGVQTI  150 (438)
T ss_dssp             HHHGGGCTTCCEEEEESSCCSSHH---HH-HHHHHHHHTTTCEEE
T ss_pred             HHCCCCcccceeEEecCcccCCHH---HH-HHHHHHHHHcCCeEE
Confidence            9999      88 777  444433   33 466778889998764

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=80.40  E-value=0.98  Score=38.43  Aligned_cols=111  Identities=19%  Similarity=0.181  Sum_probs=58.3

Q ss_pred             cccceeeecccccCCCCCCCc-hhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcCcEEEe
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPR-PSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILN  131 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r-~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN  131 (184)
                      ++||+.-|-|-     |.--| ++.+|++...   -+|.+..|+.++..+....+..  .+.   +++.. + ++|+|||
T Consensus       120 ~~~k~vlvlGa-----GGaaraia~~L~~~G~---~~v~v~nRt~~ka~~La~~~~~--~~~---~~l~~-l-~~DivIn  184 (282)
T 3fbt_A          120 IKNNICVVLGS-----GGAARAVLQYLKDNFA---KDIYVVTRNPEKTSEIYGEFKV--ISY---DELSN-L-KGDVIIN  184 (282)
T ss_dssp             CTTSEEEEECS-----STTHHHHHHHHHHTTC---SEEEEEESCHHHHHHHCTTSEE--EEH---HHHTT-C-CCSEEEE
T ss_pred             ccCCEEEEECC-----cHHHHHHHHHHHHcCC---CEEEEEeCCHHHHHHHHHhcCc--ccH---HHHHh-c-cCCEEEE
Confidence            45666555552     22222 4555666542   2788888876554333343432  222   34555 4 8999999


Q ss_pred             cccc--cccc-chHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         132 CVGP--YTWY-GEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       132 ~aGP--f~~~-g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      |..-  +-.. ..++-..++..+...+|+.=.+.-+     .|-.+|+++|..++
T Consensus       185 aTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T-----~ll~~A~~~G~~~~  234 (282)
T 3fbt_A          185 CTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVET-----LFLKYARESGVKAV  234 (282)
T ss_dssp             CSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSC-----HHHHHHHHTTCEEE
T ss_pred             CCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCC-----HHHHHHHHCcCeEe
Confidence            9832  1111 1245556677777778886333211     22235566666544

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=80.20  E-value=0.21  Score=39.68  Aligned_cols=51  Identities=10%  Similarity=-0.014  Sum_probs=30.4

Q ss_pred             eeEEeeeeccccccc--CCCCCCEEEEeCCCHHHHHHH---h---hcCcEEEecccccc
Q psy1304          87 TRLGLLGARDCLYRE--NLIDIPIIIADLKNESSILIM---A---KKCRVILNCVGPYT  137 (184)
Q Consensus        87 ~~iaLAGrr~~lg~~--~~~~v~~v~vDv~D~~sL~a~---l---~~~dVVIN~aGPf~  137 (184)
                      .++.+.+|+.+....  ...++.++.+|+.|.++...+   +   .+.|+|||++|...
T Consensus        29 ~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~   87 (245)
T 3e9n_A           29 HIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVAR   87 (245)
T ss_dssp             SEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC----
T ss_pred             CeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCcCC
Confidence            567777776542211  135678889999887552222   2   26899999999653

>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*

Probab=80.08  E-value=0.74  Score=41.83  Aligned_cols=39  Identities=13%  Similarity=0.085  Sum_probs=27.5

Q ss_pred             HHHHHHHH-----cCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         142 AVVKACIE-----AKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       142 ~VaeACie-----AGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      --+.||++     +||.||..+-  .|.-.. ..+.+.|+++|++++
T Consensus       174 ~YA~AAl~~~~~~aG~~fVN~~P--~~ia~~-P~~~ela~~~gvpi~  217 (394)
T 1vjp_A          174 VYAYAAALYANKRGGAAFVNVIP--TFIAND-PAFVELAKENNLVVF  217 (394)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSS--SCSTTC-HHHHHHHHHTTEEEE
T ss_pred             HHHHHHHhhccccCCcceEecCC--ccccCC-HHHHHHHHHcCCCEE
Confidence            34689999     9999987654  333222 356778889998875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	184
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.91
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.4
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.33
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.24
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	96.82
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.81
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.45
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.2
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.17
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.1
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.06
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	96.02
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.0
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.97
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	95.97
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	95.94
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	95.87
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	95.86
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	95.8
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	95.78
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	95.59
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	95.58
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	95.56
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	95.48
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	95.46
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	95.45
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	95.45
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.41
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	95.36
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	95.22
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	95.18
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.17
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	95.13
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	95.09
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	95.07
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	95.06
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	94.94
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	94.94
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	94.84
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	94.83
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	94.82
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	94.81
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	94.79
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	94.76
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	94.69
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	94.66
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	94.53
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	94.5
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	94.47
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.44
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	94.25
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	93.91
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	93.67
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	93.67
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	93.49
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	93.25
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	93.17
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	93.07
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	92.82
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.69
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	92.44
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	92.03
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	91.89
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	91.82
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	91.78
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	91.24
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	91.17
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	90.94
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	90.77
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	90.72
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	90.58
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	90.36
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	90.29
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.03
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	89.48
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	89.38
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	89.18
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	89.06
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	89.03
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	88.99
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	88.68
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	88.17
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	88.06
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	88.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	87.33
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	87.33
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	87.24
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	86.91
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	85.37
d1vjpa1	275	Hypothetical protein TM1419 {Thermotoga maritima [	84.98
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	84.48
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.95
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	81.53
d1u1ia1	287	Myo-inositol 1-phosphate synthase {Archaeoglobus f	81.02
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	80.56
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	80.07

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=1.9e-05  Score=60.34  Aligned_cols=92  Identities=13%  Similarity=0.053  Sum_probs=68.3

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhhc
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAKK  125 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~~  125 (184)
                      |.+.++|-|.-                ++..|.+..    -++.+..|+..+... ...+++++.+|+.|++++.+++++
T Consensus         8 V~GatG~iG~~----------------v~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~   67 (205)
T d1hdoa_           8 IFGATGQTGLT----------------TLAQAVQAG----YEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAG   67 (205)
T ss_dssp             EESTTSHHHHH----------------HHHHHHHTT----CEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTT
T ss_pred             EECCCCHHHHH----------------HHHHHHHCc----CEEEEEEcChhhcccccccccccccccccchhhHHHHhcC
Confidence            46667777776                667777653    456666676554332 226789999999999999999999


Q ss_pred             CcEEEecccccccc---------chHHHHHHHHcCCC-EeeCC
Q psy1304         126 CRVILNCVGPYTWY---------GEAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       126 ~dVVIN~aGPf~~~---------g~~VaeACieAGth-YVDlt  158 (184)
                      +|+||+|+|+....         -.+++++|.++|+. ++-++
T Consensus        68 ~d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~s  110 (205)
T d1hdoa_          68 QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT  110 (205)
T ss_dssp             CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CCEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEe
Confidence            99999999975332         15799999999986 66654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.40  E-value=0.00022  Score=51.62  Aligned_cols=100  Identities=16%  Similarity=0.220  Sum_probs=75.5

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc---CCCCCCEEEEeCCCHHHHHHHhhcCcEEEeccccccccchHHHHHHHHc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE---NLIDIPIIIADLKNESSILIMAKKCRVILNCVGPYTWYGEAVVKACIEA  150 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieA  150 (184)
                      ++.+|++..    .+|.+..|+.+....   ..........+..+...+.+.+...|+++++. |+.. ...++..|.+.
T Consensus        17 ~a~~L~~~g----~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~-~~~~-~~~~~~~~~~~   90 (182)
T d1e5qa1          17 TLDVLTDSG----IKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI-PYTF-HATVIKSAIRQ   90 (182)
T ss_dssp             HHHHHHTTT----CEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECS-CGGG-HHHHHHHHHHH
T ss_pred             HHHHHHhCC----CEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeec-cchh-hhHHHHHHHhh
Confidence            677787663    689999998764432   22344455567788889999999999999886 6644 46888999999


Q ss_pred             CCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         151 KTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       151 GthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++||+|++...+.   + .++++.++.++..++
T Consensus        91 ~~~~~~~~~~~~~---~-~~l~~~~~~~~~~~~  119 (182)
T d1e5qa1          91 KKHVVTTSYVSPA---M-MELDQAAKDAGITVM  119 (182)
T ss_dssp             TCEEECSSCCCHH---H-HHTHHHHHHTTCEEE
T ss_pred             ccceeecccCcHH---H-HHHHHHhccccceee
Confidence            9999999876553   3 578888988887654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=6.2e-05  Score=58.60  Aligned_cols=100  Identities=11%  Similarity=0.049  Sum_probs=74.6

Q ss_pred             hccccccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc-cCCCCCCEEEEeCCCHHHHH
Q psy1304          42 RKEDRIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR-ENLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~-~~~~~v~~v~vDv~D~~sL~  120 (184)
                      .|-=.|.+.++|-|+-                ++.+|...+.-  .+|.+..|+..... .....+++..+|.++.+++.
T Consensus        14 ~k~IlItGaTG~iG~~----------------l~~~Ll~~g~~--~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~   75 (232)
T d2bkaa1          14 NKSVFILGASGETGRV----------------LLKEILEQGLF--SKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYA   75 (232)
T ss_dssp             CCEEEEECTTSHHHHH----------------HHHHHHHHTCC--SEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGG
T ss_pred             CCEEEEECCCcHHHHH----------------HHHHHHhCCCC--CEEEEEecChhhhcccccceeeeeeeccccccccc
Confidence            3433458999999998                77888866543  47777777654322 22367888889999999999


Q ss_pred             HHhhcCcEEEecccccccc-------------chHHHHHHHHcCCC-EeeCCC
Q psy1304         121 IMAKKCRVILNCVGPYTWY-------------GEAVVKACIEAKTH-HVDITG  159 (184)
Q Consensus       121 a~l~~~dVVIN~aGPf~~~-------------g~~VaeACieAGth-YVDltG  159 (184)
                      ..++++|+|++|+|.....             ...++++|.+.|+. ++-++.
T Consensus        76 ~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss  128 (232)
T d2bkaa1          76 SAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS  128 (232)
T ss_dssp             GGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             ccccccccccccccccccccchhhhhhhcccccceeeecccccCccccccCCc
Confidence            9999999999999875322             15799999999998 555553

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.24  E-value=0.00021  Score=52.41  Aligned_cols=72  Identities=10%  Similarity=-0.055  Sum_probs=57.2

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKC  126 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~  126 (184)
                      |.+.++|-|+-                ++.+|.+....  ..+....|+.........+++++.+|..|.+++.++++++
T Consensus         8 VtGatG~iG~~----------------l~~~Ll~~g~~--v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~   69 (252)
T d2q46a1           8 VTGASGRTGQI----------------VYKKLKEGSDK--FVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI   69 (252)
T ss_dssp             EESTTSTTHHH----------------HHHHHHHTTTT--CEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTC
T ss_pred             EECCccHHHHH----------------HHHHHHHCCCc--EEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccc
Confidence            57788899988                88899888766  6555444655443333478999999999999999999999


Q ss_pred             cEEEeccccc
Q psy1304         127 RVILNCVGPY  136 (184)
Q Consensus       127 dVVIN~aGPf  136 (184)
                      |.||++++..
T Consensus        70 d~vi~~a~~~   79 (252)
T d2q46a1          70 DALVILTSAV   79 (252)
T ss_dssp             SEEEECCCCC
T ss_pred             eeeEEEEeec
Confidence            9999999864

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.82  E-value=0.00022  Score=54.62  Aligned_cols=79  Identities=13%  Similarity=0.099  Sum_probs=55.5

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCC------CCCCEEEEeCCCHHHHHHHh
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENL------IDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~------~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ...++||+.-|-|-   ++|---.++..|++..    .++.+.+|+.+...+..      .++.+..+|+.|.+++++++
T Consensus        18 ~~~l~gK~vlItGa---sgGIG~~ia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAG---TGPVGMRSAALLAGEG----AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV   90 (191)
T ss_dssp             TSCCTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT
T ss_pred             CCCCCCCEEEEECC---CHHHHHHHHHHHHhhc----cchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh
Confidence            34678888888761   1121112555666554    67899999865432111      45678999999999999999


Q ss_pred             hcCcEEEecccc
Q psy1304         124 KKCRVILNCVGP  135 (184)
Q Consensus       124 ~~~dVVIN~aGP  135 (184)
                      .+.|+|||++|+
T Consensus        91 ~~iDilin~Ag~  102 (191)
T d1luaa1          91 KGAHFVFTAGAI  102 (191)
T ss_dssp             TTCSEEEECCCT
T ss_pred             cCcCeeeecCcc
Confidence            999999999985

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.81  E-value=0.00079  Score=50.65  Aligned_cols=64  Identities=14%  Similarity=0.021  Sum_probs=48.0

Q ss_pred             HHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         118 SILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++..+..+.|+|+.|.+|...  .+++..|+++|.|+|+......-.-+...++++.|++.|..++
T Consensus        51 ~~~~~~~~~D~Vvi~tp~~~h--~~~a~~aL~aG~~vv~~~~~~~~~~~~~~~l~~~A~~~~~~~~  114 (170)
T d1f06a1          51 DVDKHADDVDVLFLCMGSATD--IPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVAL  114 (170)
T ss_dssp             GGGGTTTTCSEEEECSCTTTH--HHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEE
T ss_pred             hhhhhccccceEEEeCCCccc--HHHHHHHHHCCCcEEEecCccccCHHHHHHHHHHHHhcCceEE
Confidence            345567889999999877754  5899999999999997655433322333689999999997754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.45  E-value=0.0013  Score=52.17  Aligned_cols=76  Identities=12%  Similarity=0.106  Sum_probs=54.5

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhh------
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAK------  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~------  124 (184)
                      .+|+||+.-|.|-   ++|----++..|++..    .+|.+.+|+++..    .++..+++|+.|+++++++++      
T Consensus         3 psl~gK~~lITGa---s~GIG~aia~~la~~G----a~V~~~~r~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           3 PPFVSRSVLVTGG---NRGIGLAIAQRLAADG----HKVAVTHRGSGAP----KGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCCEEEETTT---TSHHHHHHHHHHHHTT----CEEEEEESSSCCC----TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCcchh----cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            4699999988873   2331111344555543    7899998876543    567789999999999988876      


Q ss_pred             -cCcEEEecccccc
Q psy1304         125 -KCRVILNCVGPYT  137 (184)
Q Consensus       125 -~~dVVIN~aGPf~  137 (184)
                       +.|++||+||-+.
T Consensus        72 g~iDiLVnnAG~~~   85 (237)
T d1uzma1          72 GPVEVLVSNAGLSA   85 (237)
T ss_dssp             SSCSEEEEECSCCC
T ss_pred             CCceEEEeeecccc
Confidence             4799999999543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.20  E-value=0.001  Score=52.93  Aligned_cols=80  Identities=13%  Similarity=0.188  Sum_probs=54.3

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-----ccCCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-----RENLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-----~~~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      |-|+||+.-|.|-   ++|----++..|++..    .++.+.+|++...     +....++.++++|+.|+++++++++ 
T Consensus         1 qrL~gKvalVTGa---s~GIG~aia~~la~~G----a~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~   73 (247)
T d2ew8a1           1 QRLKDKLAVITGG---ANGIGRAIAERFAVEG----ADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQ   73 (247)
T ss_dssp             CTTTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            4588998888772   2330011444454444    7889998865321     1122567899999999999998875 


Q ss_pred             ------cCcEEEecccccc
Q psy1304         125 ------KCRVILNCVGPYT  137 (184)
Q Consensus       125 ------~~dVVIN~aGPf~  137 (184)
                            +.|++||+||.+.
T Consensus        74 ~~~~~G~iDilVnnAG~~~   92 (247)
T d2ew8a1          74 VISTFGRCDILVNNAGIYP   92 (247)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHHcCCCCEEEECCCCCC
Confidence                  5899999999764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.17  E-value=0.00071  Score=53.96  Aligned_cols=82  Identities=11%  Similarity=0.080  Sum_probs=56.3

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      |.-|+||+.-|-|-   .+|----++..|++..    .+|.+.+|+.+..++      ...++.++++|+.|++++++++
T Consensus         1 snrL~gK~alVTGa---s~GIG~aia~~la~~G----a~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   73 (251)
T d1zk4a1           1 SNRLDGKVAIITGG---TLGIGLAIATKFVEEG----AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLF   73 (251)
T ss_dssp             CCTTTTCEEEETTT---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHH
Confidence            34588999888872   2230111455555554    789999987643221      2256789999999999999887


Q ss_pred             hc-------CcEEEeccccccc
Q psy1304         124 KK-------CRVILNCVGPYTW  138 (184)
Q Consensus       124 ~~-------~dVVIN~aGPf~~  138 (184)
                      +.       .|++||++|....
T Consensus        74 ~~~~~~~G~iDiLVnnAg~~~~   95 (251)
T d1zk4a1          74 DATEKAFGPVSTLVNNAGIAVN   95 (251)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCC
T ss_pred             HHHHHHhCCceEEEeccccccc
Confidence            74       6999999997644

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=96.10  E-value=0.002  Score=51.88  Aligned_cols=89  Identities=11%  Similarity=0.076  Sum_probs=61.4

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEe---eeeccccc---ccCCCCCCEEEEeCCCHHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGL---LGARDCLY---RENLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaL---AGrr~~lg---~~~~~~v~~v~vDv~D~~sL~  120 (184)
                      |-+.++|=|+-                ++..|.+....  +.+.-   -+++....   .....+++++++|+.|.+.+.
T Consensus         5 ItG~tGfIG~~----------------l~~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~   66 (338)
T d1udca_           5 VTGGSGYIGSH----------------TCVQLLQNGHD--VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMT   66 (338)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTTCE--EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHH
T ss_pred             EECCCCHHHHH----------------HHHHHHHCcCE--EEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHH
Confidence            46788898888                77888877655  33310   01111111   012257999999999999999


Q ss_pred             HHhh--cCcEEEecccccc----cc--------c----hHHHHHHHHcCCC
Q psy1304         121 IMAK--KCRVILNCVGPYT----WY--------G----EAVVKACIEAKTH  153 (184)
Q Consensus       121 a~l~--~~dVVIN~aGPf~----~~--------g----~~VaeACieAGth  153 (184)
                      ++++  ++|+|||+|+.-.    ..        +    ..++++|.+.|+.
T Consensus        67 ~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~  117 (338)
T d1udca_          67 EILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK  117 (338)
T ss_dssp             HHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCC
Confidence            9998  7899999997321    10        0    4789999999975

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.00082  Score=53.74  Aligned_cols=80  Identities=20%  Similarity=0.060  Sum_probs=54.8

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------C--CCCCCEEEEeCCCHHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------N--LIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~--~~~v~~v~vDv~D~~sL~a~  122 (184)
                      -|+||+.-|.|   -++|    |-.++|+..-.+-.+|.+.+|+.+..++       .  ..++.+++||+.|+++++++
T Consensus         7 ~lk~Kv~lITG---as~G----IG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~   79 (257)
T d1xg5a_           7 RWRDRLALVTG---ASGG----IGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSM   79 (257)
T ss_dssp             GGTTCEEEEES---TTSH----HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEeC---CCCH----HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHH
Confidence            39999998887   2333    6556653331112789999987542111       1  13567889999999999988


Q ss_pred             hh-------cCcEEEeccccccc
Q psy1304         123 AK-------KCRVILNCVGPYTW  138 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf~~  138 (184)
                      ++       +.|++||++|.+..
T Consensus        80 v~~~~~~~g~iD~lVnnAg~~~~  102 (257)
T d1xg5a_          80 FSAIRSQHSGVDICINNAGLARP  102 (257)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCCC
T ss_pred             HHHHHHhcCCCCEEEecccccCC
Confidence            76       47999999997643

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=96.02  E-value=0.0057  Score=49.08  Aligned_cols=92  Identities=11%  Similarity=0.094  Sum_probs=66.6

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeee------cccccccCCCCCCEEEEeCCCHHHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGA------RDCLYRENLIDIPIIIADLKNESSI  119 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGr------r~~lg~~~~~~v~~v~vDv~D~~sL  119 (184)
                      .|-+.++|=|..                ++.+|.+...+  +++.....      ...+......+++++.+|+.|.+.+
T Consensus         6 LVTGgtGfIGs~----------------lv~~L~~~g~~--v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~   67 (346)
T d1oc2a_           6 IVTGGAGFIGSN----------------FVHYVYNNHPD--VHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELV   67 (346)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHHCTT--CEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHH
T ss_pred             EEeCCCcHHHHH----------------HHHHHHHCCCC--eEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHH
Confidence            357889999988                88899877666  66543211      1111111225789999999999999


Q ss_pred             HHHhhcCcEEEecccccccc----------------chHHHHHHHHcCCCEe
Q psy1304         120 LIMAKKCRVILNCVGPYTWY----------------GEAVVKACIEAKTHHV  155 (184)
Q Consensus       120 ~a~l~~~dVVIN~aGPf~~~----------------g~~VaeACieAGthYV  155 (184)
                      ..++.+++.|+++|++....                ..+++++|...+..++
T Consensus        68 ~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i  119 (346)
T d1oc2a_          68 DKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFH  119 (346)
T ss_dssp             HHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEE
T ss_pred             HHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhcccccccc
Confidence            99999999999999875321                1577899999997654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.00  E-value=0.0012  Score=52.58  Aligned_cols=78  Identities=14%  Similarity=0.077  Sum_probs=53.9

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      -|+||+.-|.|-   ++|----++..|++..    .+|.+.+|+.+...+        ...++.++++|+.|++++++++
T Consensus         6 ~l~gK~alITGa---s~GIG~aia~~la~~G----a~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~   78 (260)
T d1h5qa_           6 SFVNKTIIVTGG---NRGIGLAFTRAVAAAG----ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTI   78 (260)
T ss_dssp             CCTTEEEEEETT---TSHHHHHHHHHHHHTT----EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHH
Confidence            589999888873   2331111444455543    889999987643211        1246788999999999999888


Q ss_pred             h-------cCcEEEeccccc
Q psy1304         124 K-------KCRVILNCVGPY  136 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf  136 (184)
                      +       +.|++||++|-.
T Consensus        79 ~~~~~~~g~iDilVnnAg~~   98 (260)
T d1h5qa_          79 QQIDADLGPISGLIANAGVS   98 (260)
T ss_dssp             HHHHHHSCSEEEEEECCCCC
T ss_pred             HHHHHHhCCCcEeccccccc
Confidence            6       479999999854

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.97  E-value=0.007  Score=46.31  Aligned_cols=91  Identities=13%  Similarity=0.066  Sum_probs=64.2

Q ss_pred             ccccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc---------cCCCCCCEEEEeCCC
Q psy1304          45 DRIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR---------ENLIDIPIIIADLKN  115 (184)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~---------~~~~~v~~v~vDv~D  115 (184)
                      =.|.++++|-|+.                ++.+|.+..-.    +....|+.....         ....+++++++|+.|
T Consensus         6 ILVtGatG~iG~~----------------l~~~L~~~G~~----V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d   65 (312)
T d1qyda_           6 VLIVGGTGYIGKR----------------IVNASISLGHP----TYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD   65 (312)
T ss_dssp             EEEESTTSTTHHH----------------HHHHHHHTTCC----EEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSC
T ss_pred             EEEECCCCHHHHH----------------HHHHHHhCCCE----EEEEECCCcccchhHHHHHhhhccCCcEEEEeeccc
Confidence            3458899999998                77888876533    333345332110         012568899999999


Q ss_pred             HHHHHHHhhcCcEEEeccccccccc-----hHHHHHHHHcC-CCEe
Q psy1304         116 ESSILIMAKKCRVILNCVGPYTWYG-----EAVVKACIEAK-THHV  155 (184)
Q Consensus       116 ~~sL~a~l~~~dVVIN~aGPf~~~g-----~~VaeACieAG-thYV  155 (184)
                      .+++.+.+++++.+++++++.....     ..++++|.+++ .+++
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v  111 (312)
T d1qyda_          66 HQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRF  111 (312)
T ss_dssp             HHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEE
T ss_pred             chhhhhhccCcchhhhhhhhcccccchhhhhHHHHHHHHhcCCcEE
Confidence            9999999999999999997654321     57788888876 4443

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.97  E-value=0.0015  Score=51.79  Aligned_cols=78  Identities=12%  Similarity=0.078  Sum_probs=54.1

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc---cCCCCCCEEEEeCCCHHHHHHHhhc---C
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR---ENLIDIPIIIADLKNESSILIMAKK---C  126 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~---~~~~~v~~v~vDv~D~~sL~a~l~~---~  126 (184)
                      |+||+.-|-|-   ++|--.-++..|++..    .+|.+.+|+++...   ....++.++.+|+.|+++++++++.   .
T Consensus         3 l~GK~alITGa---s~GIG~aia~~la~~G----a~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~i   75 (242)
T d1cyda_           3 FSGLRALVTGA---GKGIGRDTVKALHASG----AKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPV   75 (242)
T ss_dssp             CTTCEEEEEST---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             CCCCEEEEeCC---CcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            78998888762   2330111344455443    78999998764321   1236788999999999999999985   6


Q ss_pred             cEEEecccccc
Q psy1304         127 RVILNCVGPYT  137 (184)
Q Consensus       127 dVVIN~aGPf~  137 (184)
                      |++||+||...
T Consensus        76 DilVnnAg~~~   86 (242)
T d1cyda_          76 DLLVNNAALVI   86 (242)
T ss_dssp             SEEEECCCCCC
T ss_pred             eEEEECCcccc
Confidence            99999998543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=95.94  E-value=0.0013  Score=52.66  Aligned_cols=78  Identities=14%  Similarity=0.188  Sum_probs=53.1

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      |+||+.-|-|-   ++|----++..|++..    .+|++.+|+.+...+         ...++..+++|+.|++++++++
T Consensus         2 l~gK~alITGa---s~GIG~aia~~la~~G----a~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~   74 (258)
T d1iy8a_           2 FTDRVVLITGG---GSGLGRATAVRLAAEG----AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV   74 (258)
T ss_dssp             CTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHH
Confidence            78888888772   2331111455555554    789999987643211         1135678899999999999887


Q ss_pred             h-------cCcEEEecccccc
Q psy1304         124 K-------KCRVILNCVGPYT  137 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf~  137 (184)
                      +       +.|++||+||...
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~   95 (258)
T d1iy8a_          75 TATTERFGRIDGFFNNAGIEG   95 (258)
T ss_dssp             HHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHhCCCCEEEECCcccc
Confidence            5       4799999999553

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.87  E-value=0.0015  Score=51.73  Aligned_cols=78  Identities=12%  Similarity=0.133  Sum_probs=52.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC--CCCCCEEEEeCCCHHHHHHHhh------
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN--LIDIPIIIADLKNESSILIMAK------  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~--~~~v~~v~vDv~D~~sL~a~l~------  124 (184)
                      |+||+.-|.|-   ++|----++.+|++..    .+|.+.+|+++...+.  .-+..++++|+.|+++++++++      
T Consensus         3 L~gK~~lITGa---s~GIG~aia~~l~~~G----~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           3 LKDKAVLITGA---AHGIGRATLELFAKEG----ARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             TTTCEEEEEST---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            67888777762   2220001344555443    7899999877533211  1356789999999999998875      


Q ss_pred             -cCcEEEecccccc
Q psy1304         125 -KCRVILNCVGPYT  137 (184)
Q Consensus       125 -~~dVVIN~aGPf~  137 (184)
                       +.|++||+||-+.
T Consensus        76 g~iDilVnnAG~~~   89 (242)
T d1ulsa_          76 GRLDGVVHYAGITR   89 (242)
T ss_dssp             SSCCEEEECCCCCC
T ss_pred             CCceEEEECCcccc
Confidence             4799999998653

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.86  E-value=0.004  Score=48.78  Aligned_cols=63  Identities=6%  Similarity=-0.045  Sum_probs=45.4

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh---------cCcEEEeccccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK---------KCRVILNCVGPYTW  138 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~---------~~dVVIN~aGPf~~  138 (184)
                      ++..|++....  .+|.+.+|+.+...+    ...++.++++|+.|.++++++++         +.|++||+||-+..
T Consensus        19 ~a~~la~~G~~--~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~   94 (250)
T d1yo6a1          19 LVQQLVKDKNI--RHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLS   94 (250)
T ss_dssp             HHHHHHTCTTC--CEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCC
T ss_pred             HHHHHHHCCCC--CEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCC
Confidence            55666666544  788888887654321    12568899999999999988764         27999999996543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.80  E-value=0.0012  Score=52.76  Aligned_cols=82  Identities=12%  Similarity=0.041  Sum_probs=55.3

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      |-.|+||+.-|.|-   ++|----++..|++..    .++.+.+|+++..++    ...+..++++|+.|+++++++++ 
T Consensus         1 ~G~L~gK~alITGa---s~GIG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   73 (244)
T d1nffa_           1 SGRLTGKVALVSGG---ARGMGASHVRAMVAEG----AKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDT   73 (244)
T ss_dssp             CCTTTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHH
Confidence            44588999888772   2220011444455444    789999987643221    11456789999999999988876 


Q ss_pred             ------cCcEEEeccccccc
Q psy1304         125 ------KCRVILNCVGPYTW  138 (184)
Q Consensus       125 ------~~dVVIN~aGPf~~  138 (184)
                            +.|++||+||.+..
T Consensus        74 ~~~~~g~idilinnAG~~~~   93 (244)
T d1nffa_          74 AVTAFGGLHVLVNNAGILNI   93 (244)
T ss_dssp             HHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHhCCCeEEEECCcccCC
Confidence                  47999999997643

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.0014  Score=52.42  Aligned_cols=79  Identities=16%  Similarity=0.269  Sum_probs=54.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc---cCCCCCCEEEEeCCCHHHHHHHhhc---
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR---ENLIDIPIIIADLKNESSILIMAKK---  125 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~---~~~~~v~~v~vDv~D~~sL~a~l~~---  125 (184)
                      -|+||+.-|.|-   .+|----++..|++.  +  .+|.+.+|+++...   +..++..++++|+.|+++++++++.   
T Consensus         3 rl~GK~alITGa---s~GIG~aia~~la~~--G--a~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   75 (250)
T d1ydea1           3 RYAGKVVVVTGG---GRGIGAGIVRAFVNS--G--ARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIR   75 (250)
T ss_dssp             TTTTCEEEEETC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHH
Confidence            488998888772   233001134444444  3  78999998764322   1235678999999999999998764   


Q ss_pred             ----CcEEEecccccc
Q psy1304         126 ----CRVILNCVGPYT  137 (184)
Q Consensus       126 ----~dVVIN~aGPf~  137 (184)
                          .|++||++|.+.
T Consensus        76 ~~g~iDilVnnAG~~~   91 (250)
T d1ydea1          76 RFGRLDCVVNNAGHHP   91 (250)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             hcCCCCEEEecccccc
Confidence                799999999653

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=95.59  E-value=0.0016  Score=51.65  Aligned_cols=79  Identities=13%  Similarity=0.077  Sum_probs=52.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccC----CCCCCEEEEeCCCHHHHHHHhh----
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYREN----LIDIPIIIADLKNESSILIMAK----  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~----~~~v~~v~vDv~D~~sL~a~l~----  124 (184)
                      |+||+.-|.|-   ++|--.-++.+|++.  +  .++.+.+|+++..++.    ..+...+++|+.|+++++++++    
T Consensus         2 l~gK~alITGa---s~GIG~a~a~~l~~~--G--~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (243)
T d1q7ba_           2 FEGKIALVTGA---SRGIGRAIAETLAAR--G--AKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRA   74 (243)
T ss_dssp             CTTCEEEESSC---SSHHHHHHHHHHHHT--T--CEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHc--C--CEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhc
Confidence            78888887762   233001134444444  3  7889999876432211    1456789999999999998887    


Q ss_pred             ---cCcEEEeccccccc
Q psy1304         125 ---KCRVILNCVGPYTW  138 (184)
Q Consensus       125 ---~~dVVIN~aGPf~~  138 (184)
                         +.|++||+||....
T Consensus        75 ~~g~iDilVnnAg~~~~   91 (243)
T d1q7ba_          75 EFGEVDILVNNAGITRD   91 (243)
T ss_dssp             HTCSCSEEEECCCCCCC
T ss_pred             ccCCcceehhhhhhccc
Confidence               48999999986644

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=95.58  E-value=0.0018  Score=51.48  Aligned_cols=78  Identities=14%  Similarity=0.108  Sum_probs=53.1

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh----
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK----  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~----  124 (184)
                      |+||+.-|.|-   ++|----++..|++..    .+|++.+|+.+...+    ...+..++.+|+.|+++++++++    
T Consensus         3 L~gK~alVTGa---s~GIG~aia~~la~~G----a~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           3 LDGKTALITGS---ARGIGRAFAEAYVREG----ARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             TTTEEEEEETC---SSHHHHHHHHHHHHTT----EEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            67888777762   2330111344444443    889999987643221    11567789999999999998876    


Q ss_pred             ---cCcEEEecccccc
Q psy1304         125 ---KCRVILNCVGPYT  137 (184)
Q Consensus       125 ---~~dVVIN~aGPf~  137 (184)
                         +.|++||++|.+.
T Consensus        76 ~~g~iDilVnnAg~~~   91 (256)
T d1k2wa_          76 RWGSIDILVNNAALFD   91 (256)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HhCCccEEEeeccccc
Confidence               4799999999654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=95.56  E-value=0.0021  Score=51.23  Aligned_cols=78  Identities=9%  Similarity=0.138  Sum_probs=52.9

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhh--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAK--  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~--  124 (184)
                      |+||+.-|.|   -++|----++.+|++.  +  .+|.+.+|+++..++      ....+.++.+|+.|+++++++++  
T Consensus         4 L~gKvalITG---as~GIG~aia~~la~~--G--a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (268)
T d2bgka1           4 LQDKVAIITG---GAGGIGETTAKLFVRY--G--AKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTT   76 (268)
T ss_dssp             TTTCEEEEES---TTSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeC---CCcHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHH
Confidence            6788877766   2223001145555554  3  789999987643221      22457789999999999999886  


Q ss_pred             -----cCcEEEecccccc
Q psy1304         125 -----KCRVILNCVGPYT  137 (184)
Q Consensus       125 -----~~dVVIN~aGPf~  137 (184)
                           +.|++||++|.+.
T Consensus        77 ~~~~g~iD~lVnnAG~~~   94 (268)
T d2bgka1          77 IAKHGKLDIMFGNVGVLS   94 (268)
T ss_dssp             HHHHSCCCEEEECCCCCC
T ss_pred             HHHcCCcceecccccccc
Confidence                 4799999999654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=95.48  E-value=0.0022  Score=51.07  Aligned_cols=78  Identities=18%  Similarity=0.230  Sum_probs=52.7

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      |+||+.-|.|-   ++|----++..|++..    .+|.+.+|+++...       +...++.++.+|+.|+++++++++ 
T Consensus         3 L~gK~alITGa---s~GIG~aia~~la~~G----a~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   75 (260)
T d1zema1           3 FNGKVCLVTGA---GGNIGLATALRLAEEG----TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS   75 (260)
T ss_dssp             TTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            78888888772   2220011445555544    78999998764221       112467789999999999998876 


Q ss_pred             ------cCcEEEecccccc
Q psy1304         125 ------KCRVILNCVGPYT  137 (184)
Q Consensus       125 ------~~dVVIN~aGPf~  137 (184)
                            +.|++||++|...
T Consensus        76 ~~~~~g~iDilVnnaG~~~   94 (260)
T d1zema1          76 VVRDFGKIDFLFNNAGYQG   94 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHHhCCCCeehhhhcccc
Confidence                  4899999999553

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=95.46  E-value=0.0017  Score=52.11  Aligned_cols=80  Identities=18%  Similarity=0.108  Sum_probs=54.6

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---CC-CCCCEEEEeCCCHHHHHHHhh---
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---NL-IDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---~~-~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      .|+||+.-|.|-   ++|----++..|++.  +  .+|.+.+|+++...+   .. .+..++++|+.|+++++++++   
T Consensus         2 dL~gK~alVTGa---s~GIG~aia~~la~~--G--a~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   74 (254)
T d1hdca_           2 DLSGKTVIITGG---ARGLGAEAARQAVAA--G--ARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAR   74 (254)
T ss_dssp             CCCCSEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCc---CCHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHH
Confidence            378999888772   233011134445444  4  789999987643221   11 457799999999999998875   


Q ss_pred             ----cCcEEEeccccccc
Q psy1304         125 ----KCRVILNCVGPYTW  138 (184)
Q Consensus       125 ----~~dVVIN~aGPf~~  138 (184)
                          +.|++||+||....
T Consensus        75 ~~~g~iDilVnnAg~~~~   92 (254)
T d1hdca_          75 EEFGSVDGLVNNAGISTG   92 (254)
T ss_dssp             HHHSCCCEEEECCCCCCC
T ss_pred             HHcCCccEEEecCccccc
Confidence                47999999986643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=95.45  E-value=0.011  Score=46.97  Aligned_cols=90  Identities=19%  Similarity=0.197  Sum_probs=58.1

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCC-CCCceeEEeeeeccccc-ccCCCCCCEEEEeCCCHHHHH-HHh
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAP-TSNLTRLGLLGARDCLY-RENLIDIPIIIADLKNESSIL-IMA  123 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~-~~~~~~iaLAGrr~~lg-~~~~~~v~~v~vDv~D~~sL~-a~l  123 (184)
                      |-+.++|=|.-                ++.+|.+.. ..  + ++|--.+.... .....++++++.|+.|.+++. .+.
T Consensus         5 ITG~tGfiG~~----------------l~~~Ll~~g~~~--V-~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~   65 (342)
T d2blla1           5 ILGVNGFIGNH----------------LTERLLREDHYE--V-YGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV   65 (342)
T ss_dssp             EETCSSHHHHH----------------HHHHHHHSTTCE--E-EEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH
T ss_pred             EECCCcHHHHH----------------HHHHHHHCCCCE--E-EEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHH
Confidence            45667888876                677877554 22  2 22221111111 112367899999998776554 488


Q ss_pred             hcCcEEEeccccccccc----------------hHHHHHHHHcCCCEe
Q psy1304         124 KKCRVILNCVGPYTWYG----------------EAVVKACIEAKTHHV  155 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g----------------~~VaeACieAGthYV  155 (184)
                      +++|+|+|||+......                ..++++|.+.++..+
T Consensus        66 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~  113 (342)
T d2blla1          66 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII  113 (342)
T ss_dssp             HHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEE
T ss_pred             hCCCccccccccccccccccCCcccccccccccccccccccccccccc
Confidence            89999999998643211                679999999999743

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.45  E-value=0.0026  Score=50.71  Aligned_cols=76  Identities=13%  Similarity=0.085  Sum_probs=53.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhC--CCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADA--PTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~--~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      -|+||+.-|.|   -++|    |-.++|+.  ..+  .+|.+.+|+++..++       ...+..++++|+.|+++++++
T Consensus         8 ~L~gK~alITG---as~G----IG~aia~~la~~G--a~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~   78 (255)
T d1fmca_           8 RLDGKCAIITG---AGAG----IGKEIAITFATAG--ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSAL   78 (255)
T ss_dssp             CCTTCEEEETT---TTSH----HHHHHHHHHHTTT--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEeC---CCcH----HHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHH
Confidence            37899988877   2233    55555532  234  789999987643221       125678899999999999887


Q ss_pred             hh-------cCcEEEeccccc
Q psy1304         123 AK-------KCRVILNCVGPY  136 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf  136 (184)
                      ++       +.|++||++|-.
T Consensus        79 ~~~~~~~~g~iDilvnnAG~~   99 (255)
T d1fmca_          79 ADFAISKLGKVDILVNNAGGG   99 (255)
T ss_dssp             HHHHHHHHSSCCEEEECCCCC
T ss_pred             HHHHHHHcCCCCEeeeCCcCC
Confidence            65       589999999954

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.41  E-value=0.014  Score=46.69  Aligned_cols=87  Identities=11%  Similarity=0.071  Sum_probs=60.6

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeee---c--cc---ccccCCCCCCEEEEeCCCHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGA---R--DC---LYRENLIDIPIIIADLKNESS  118 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGr---r--~~---lg~~~~~~v~~v~vDv~D~~s  118 (184)
                      |-+.++|=|..                ++.+|.+....  +..  ..+   +  +.   .......+++++++|+.|.+.
T Consensus         6 VTGatGfIG~~----------------lv~~Ll~~g~~--V~~--~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~   65 (347)
T d1z45a2           6 VTGGAGYIGSH----------------TVVELIENGYD--CVV--ADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKG   65 (347)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTTCE--EEE--EECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHH
T ss_pred             EeCCCcHHHHH----------------HHHHHHHCcCe--EEE--EECCCCcchhHHHhHHhhcccCCeEEEeecCCHHH
Confidence            45889999988                77888876544  322  211   0  00   000012578999999999999


Q ss_pred             HHHHhh--cCcEEEeccccccccc----------------hHHHHHHHHcCCC
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYG----------------EAVVKACIEAKTH  153 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g----------------~~VaeACieAGth  153 (184)
                      ++.+++  ++|+|+|||+......                ..++++|.+.++.
T Consensus        66 l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~  118 (347)
T d1z45a2          66 LEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVS  118 (347)
T ss_dssp             HHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccc
Confidence            999988  6899999998642111                5788999999974

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.36  E-value=0.0027  Score=50.77  Aligned_cols=81  Identities=11%  Similarity=0.099  Sum_probs=54.0

Q ss_pred             cCcc--ccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHH
Q psy1304          50 SQPF--RGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        50 ~~~~--~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~  120 (184)
                      ||-|  +||+.-|.|-   ++|----++..|++.  +  .+|.+.+|+++...       ....++.++.+|+.|+++++
T Consensus         1 s~~F~LkgK~alVTGa---s~GIG~aiA~~la~~--G--a~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   73 (259)
T d1xq1a_           1 SQRWSLKAKTVLVTGG---TKGIGHAIVEEFAGF--G--AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPERE   73 (259)
T ss_dssp             CCTTCCTTCEEEETTT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred             CCccCCCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHH
Confidence            5667  8999888873   233111145555554  3  78999998764221       12256789999999999988


Q ss_pred             HHhh-------c-CcEEEecccccc
Q psy1304         121 IMAK-------K-CRVILNCVGPYT  137 (184)
Q Consensus       121 a~l~-------~-~dVVIN~aGPf~  137 (184)
                      ++++       + .|++||++|-..
T Consensus        74 ~~~~~~~~~~~g~idilvnnAG~~~   98 (259)
T d1xq1a_          74 KLMQTVSSMFGGKLDILINNLGAIR   98 (259)
T ss_dssp             HHHHHHHHHHTTCCSEEEEECCC--
T ss_pred             HHHHHHHHHhCCCcccccccccccC
Confidence            8764       2 699999999553

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.0037  Score=49.36  Aligned_cols=76  Identities=14%  Similarity=0.136  Sum_probs=53.8

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhC--CCCCceeEEeeeeccccccc---CCCCCCEEEEeCCCHHHHHHHhhc--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADA--PTSNLTRLGLLGARDCLYRE---NLIDIPIIIADLKNESSILIMAKK--  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~--~~~~~~~iaLAGrr~~lg~~---~~~~v~~v~vDv~D~~sL~a~l~~--  125 (184)
                      .+||+.-|.|-   ++|    |-.++|+.  -.+  .+|.+.+|+++...+   ...+...+++|+.|+++++++++.  
T Consensus         5 L~GK~~lITGa---s~G----IG~aia~~la~~G--~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g   75 (244)
T d1pr9a_           5 LAGRRVLVTGA---GKG----IGRGTVQALHATG--ARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVG   75 (244)
T ss_dssp             CTTCEEEEEST---TSH----HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCC
T ss_pred             CCCCEEEEeCC---CCH----HHHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhC
Confidence            57888888772   233    44444432  234  789999987643221   235688999999999999999875  


Q ss_pred             -CcEEEecccccc
Q psy1304         126 -CRVILNCVGPYT  137 (184)
Q Consensus       126 -~dVVIN~aGPf~  137 (184)
                       .|++||++|...
T Consensus        76 ~iDilVnnAg~~~   88 (244)
T d1pr9a_          76 PVDLLVNNAAVAL   88 (244)
T ss_dssp             CCCEEEECCCCCC
T ss_pred             CceEEEecccccc
Confidence             699999998654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.18  E-value=0.0031  Score=50.20  Aligned_cols=77  Identities=17%  Similarity=0.113  Sum_probs=52.1

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--------CCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--------NLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--------~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      |+||+.-|.|-   ++|----++..|++..    .+|.+.+|+.+...+        ...++.++++|+.|+++++++++
T Consensus         3 l~gK~~lITGa---s~GIG~aia~~la~~G----a~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~   75 (251)
T d1vl8a_           3 LRGRVALVTGG---SRGLGFGIAQGLAEAG----CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE   75 (251)
T ss_dssp             CTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH
Confidence            67888777762   2231111455555554    789999987543211        11456789999999999998876


Q ss_pred             -------cCcEEEeccccc
Q psy1304         125 -------KCRVILNCVGPY  136 (184)
Q Consensus       125 -------~~dVVIN~aGPf  136 (184)
                             +.|++||+||-.
T Consensus        76 ~~~~~~g~iDiLVnnAG~~   94 (251)
T d1vl8a_          76 AVKEKFGKLDTVVNAAGIN   94 (251)
T ss_dssp             HHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence                   479999999954

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.17  E-value=0.022  Score=45.53  Aligned_cols=92  Identities=10%  Similarity=-0.003  Sum_probs=65.2

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-ccCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-RENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-~~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .|-+.++|=|+-                ++.+|.+..-.  +.  ...+++... .......++..+|+.|.+.+.++++
T Consensus        19 LVTGgsGfIGs~----------------lv~~L~~~g~~--V~--~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   78 (363)
T d2c5aa1          19 SITGAGGFIASH----------------IARRLKHEGHY--VI--ASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE   78 (363)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHTTCE--EE--EEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT
T ss_pred             EEECCCCHHHHH----------------HHHHHHHCcCE--EE--EEeCCCccchhhhcccCcEEEeechhHHHHHHHhh
Confidence            346888999988                77888875433  32  222322211 1122567899999999999999999


Q ss_pred             cCcEEEeccccccccc-----------------hHHHHHHHHcCCC-EeeC
Q psy1304         125 KCRVILNCVGPYTWYG-----------------EAVVKACIEAKTH-HVDI  157 (184)
Q Consensus       125 ~~dVVIN~aGPf~~~g-----------------~~VaeACieAGth-YVDl  157 (184)
                      ++|.||+++++.....                 ..++++|.+.|+. +|.+
T Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~  129 (363)
T d2c5aa1          79 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYA  129 (363)
T ss_dssp             TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             cCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccc
Confidence            9999999997765422                 5689999999986 5543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=95.13  E-value=0.018  Score=43.24  Aligned_cols=93  Identities=16%  Similarity=0.137  Sum_probs=68.4

Q ss_pred             hccccccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc----------cCCCCCCEEEE
Q psy1304          42 RKEDRIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR----------ENLIDIPIIIA  111 (184)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~----------~~~~~v~~v~v  111 (184)
                      ||.=.|.+.++|-|+-                ++.+|.+..-.    +....|+.....          .....++++..
T Consensus         3 kkKILVtGatG~iG~~----------------l~~~L~~~G~~----V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~   62 (307)
T d1qyca_           3 RSRILLIGATGYIGRH----------------VAKASLDLGHP----TFLLVRESTASSNSEKAQLLESFKASGANIVHG   62 (307)
T ss_dssp             CCCEEEESTTSTTHHH----------------HHHHHHHTTCC----EEEECCCCCTTTTHHHHHHHHHHHTTTCEEECC
T ss_pred             CCEEEEECCCcHHHHH----------------HHHHHHHCCCe----EEEEECCCccccchhHHHHHHhhccCCcEEEEe
Confidence            4444568889999988                77888876533    333334332110          01246889999


Q ss_pred             eCCCHHHHHHHhhcCcEEEeccccccccc-hHHHHHHHHcCCCE
Q psy1304         112 DLKNESSILIMAKKCRVILNCVGPYTWYG-EAVVKACIEAKTHH  154 (184)
Q Consensus       112 Dv~D~~sL~a~l~~~dVVIN~aGPf~~~g-~~VaeACieAGthY  154 (184)
                      |+.+...+.+.+++++.|++++++....+ ..++++|.++++..
T Consensus        63 d~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~a~~~~~~~~  106 (307)
T d1qyca_          63 SIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVK  106 (307)
T ss_dssp             CTTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCS
T ss_pred             ecccchhhhhhhhhceeeeecccccccchhhHHHHHHHHhcccc
Confidence            99999999999999999999999887666 78889999988863

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=95.09  E-value=0.0033  Score=49.57  Aligned_cols=78  Identities=14%  Similarity=0.153  Sum_probs=52.0

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh---
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK---  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~---  124 (184)
                      -|+||+.-|-|-   ++|----++..|++..    .+|.+.+|+.+...+    .-.+..++++|+.|+++++++++   
T Consensus         2 ~l~gK~alItGa---s~GIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~   74 (241)
T d2a4ka1           2 RLSGKTILVTGA---ASGIGRAALDLFAREG----ASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEAL   74 (241)
T ss_dssp             TTTTCEEEEEST---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            378888877762   2330111444444433    789999987753211    11456789999999999988876   


Q ss_pred             ----cCcEEEeccccc
Q psy1304         125 ----KCRVILNCVGPY  136 (184)
Q Consensus       125 ----~~dVVIN~aGPf  136 (184)
                          +.|++||++|..
T Consensus        75 ~~~g~iDiLinnAg~~   90 (241)
T d2a4ka1          75 EEFGRLHGVAHFAGVA   90 (241)
T ss_dssp             HHHSCCCEEEEGGGGT
T ss_pred             HHhCCccEeccccccc
Confidence                479999999754

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=95.07  E-value=0.003  Score=50.22  Aligned_cols=78  Identities=18%  Similarity=0.146  Sum_probs=51.6

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-CCCCCCEEEEeCCCHHHHHHHhh------
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-NLIDIPIIIADLKNESSILIMAK------  124 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-~~~~v~~v~vDv~D~~sL~a~l~------  124 (184)
                      .|+||+.-|-|   -++|----++..|++..    .+|.+.+|+++..+. ...+..++++|+.|+++++++++      
T Consensus         2 ~l~GK~alITG---as~GIG~aia~~la~~G----~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           2 LFAGKGVLVTG---GARGIGRAIAQAFAREG----ALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTTTCEEEEET---TTSHHHHHHHHHHHHTT----CEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeC---CCCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            47899888876   12230011344444444    789999987653211 11245688999999999998876      


Q ss_pred             -cCcEEEeccccc
Q psy1304         125 -KCRVILNCVGPY  136 (184)
Q Consensus       125 -~~dVVIN~aGPf  136 (184)
                       +.|++||+||-+
T Consensus        75 G~iDiLVnnAG~~   87 (248)
T d2d1ya1          75 GRVDVLVNNAAIA   87 (248)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCeEEEeCcCC
Confidence             479999999854

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.06  E-value=0.0044  Score=48.58  Aligned_cols=77  Identities=14%  Similarity=0.096  Sum_probs=53.4

Q ss_pred             ccccceeeecccc---cCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHH
Q psy1304          52 PFRGQTLSVQDKI---RPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        52 ~~~~~~~~~~~~~---~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      .++||+.-|-|--   --||.    ++.+|++..    .+|++.+|++.+...      ...+..++++|+.|+++++++
T Consensus         5 ~L~gK~alITGas~~~GIG~a----iA~~la~~G----a~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   76 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFA----IAAKLKEAG----AEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDAL   76 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHH----HHHHHHHTT----CEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHH----HHHHHHHCC----CEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHH
Confidence            4688988887621   01222    566666654    778888887643221      125677899999999999998


Q ss_pred             hh-------cCcEEEeccccc
Q psy1304         123 AK-------KCRVILNCVGPY  136 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf  136 (184)
                      ++       +.|++||++|..
T Consensus        77 ~~~~~~~~g~iDilVnnag~~   97 (256)
T d1ulua_          77 FAGVKEAFGGLDYLVHAIAFA   97 (256)
T ss_dssp             HHHHHHHHSSEEEEEECCCCC
T ss_pred             HHHHHHhcCCceEEEeccccc
Confidence            76       479999999854

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.94  E-value=0.0051  Score=48.82  Aligned_cols=60  Identities=13%  Similarity=-0.030  Sum_probs=44.2

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++.. +  .+|.+++|+.+..++       ...++.++++|+.|.++++++++       +.|++||.||-.
T Consensus        19 ~A~~la~~~-g--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~   92 (275)
T d1wmaa1          19 IVRDLCRLF-S--GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA   92 (275)
T ss_dssp             HHHHHHHHS-S--SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred             HHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcC
Confidence            455566542 3  689999998654321       22578899999999999988765       479999999954

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.94  E-value=0.0036  Score=50.05  Aligned_cols=79  Identities=16%  Similarity=0.228  Sum_probs=53.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----------CCCCCCEEEEeCCCHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----------NLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----------~~~~v~~v~vDv~D~~sL~a  121 (184)
                      -|+||+.-|-|-   ++|----++..|++..    .+|.+.+|+++..++          ...++.++++|+.|++++++
T Consensus         2 rL~gK~alVTGa---s~GIG~aia~~la~~G----a~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~   74 (272)
T d1xkqa_           2 RFSNKTVIITGS---SNGIGRTTAILFAQEG----ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQ   74 (272)
T ss_dssp             TTTTCEEEETTC---SSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEeCc---CcHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHH
Confidence            378888888772   2230111444555544    789999987642211          01346789999999999998


Q ss_pred             Hhh-------cCcEEEecccccc
Q psy1304         122 MAK-------KCRVILNCVGPYT  137 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGPf~  137 (184)
                      +++       +.|++||++|.+.
T Consensus        75 ~~~~~~~~~g~iDilvnnAG~~~   97 (272)
T d1xkqa_          75 IINSTLKQFGKIDVLVNNAGAAI   97 (272)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHhCCceEEEeCCcccC
Confidence            886       4799999999653

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=94.84  E-value=0.0042  Score=49.21  Aligned_cols=78  Identities=15%  Similarity=0.160  Sum_probs=50.6

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc-cc--------cCCCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL-YR--------ENLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l-g~--------~~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .+||+.-|.|-   ++|----++..|++..    .++.+.+|++.. .+        ....++.++.+|+.|++++++++
T Consensus         2 L~gK~alITGa---s~GIG~aiA~~la~~G----a~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~   74 (260)
T d1x1ta1           2 LKGKVAVVTGS---TSGIGLGIATALAAQG----ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLV   74 (260)
T ss_dssp             CTTCEEEETTC---SSHHHHHHHHHHHHTT----CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHH
T ss_pred             CCcCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            36777666552   1220011555555554    789999987421 11        01146778899999999999988


Q ss_pred             h-------cCcEEEecccccc
Q psy1304         124 K-------KCRVILNCVGPYT  137 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf~  137 (184)
                      +       +.|++||+||...
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~   95 (260)
T d1x1ta1          75 DNAVRQMGRIDILVNNAGIQH   95 (260)
T ss_dssp             HHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHhCCCcEEEeeccccc
Confidence            6       4799999999653

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=94.83  E-value=0.0075  Score=47.63  Aligned_cols=59  Identities=12%  Similarity=0.051  Sum_probs=43.6

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++..|++..    .+|.+.+|+++...+       ...++.++++|+.|+++++++++       +.|++||+||-.
T Consensus        18 ia~~la~~G----a~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~   90 (257)
T d2rhca1          18 IARRLGKEG----LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRP   90 (257)
T ss_dssp             HHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEeccccc
Confidence            555666554    789999987542211       12567889999999999998876       379999999854

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=94.81  E-value=0.011  Score=48.08  Aligned_cols=87  Identities=10%  Similarity=0.035  Sum_probs=58.1

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc---------ccc---ccCCCCCCEEEEeCC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD---------CLY---RENLIDIPIIIADLK  114 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~---------~lg---~~~~~~v~~v~vDv~  114 (184)
                      |-+.++|=|.-                ++.+|.+....    |-...|+.         .+.   .....+++++++|+.
T Consensus         6 ITGatGfiGs~----------------lv~~Ll~~g~~----V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   65 (357)
T d1db3a_           6 ITGVTGQDGSY----------------LAEFLLEKGYE----VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLS   65 (357)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTTCE----EEEECC---------------------CCEEECCCCSS
T ss_pred             EeCCCcHHHHH----------------HHHHHHHCcCE----EEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecC
Confidence            56778898887                67788766433    22222321         010   011257889999999


Q ss_pred             CHHHHHHHhhcC--cEEEecccccccc------------c----hHHHHHHHHcCCC
Q psy1304         115 NESSILIMAKKC--RVILNCVGPYTWY------------G----EAVVKACIEAKTH  153 (184)
Q Consensus       115 D~~sL~a~l~~~--dVVIN~aGPf~~~------------g----~~VaeACieAGth  153 (184)
                      |.+++.++++++  |+|+||++.....            +    .+++++|.+.++.
T Consensus        66 d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~  122 (357)
T d1db3a_          66 DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE  122 (357)
T ss_dssp             CHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT
T ss_pred             CHHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999999999965  9999999863211            1    5678999998764

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.79  E-value=0.0029  Score=50.80  Aligned_cols=78  Identities=17%  Similarity=0.269  Sum_probs=52.0

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----------CCCCCCEEEEeCCCHHHHHHH
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----------NLIDIPIIIADLKNESSILIM  122 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----------~~~~v~~v~vDv~D~~sL~a~  122 (184)
                      |+||+.-|.|-   ++|----++..|++.  +  .+|++.+|+++..++          ...++.++++|+.|+++++++
T Consensus         2 L~gK~alITGa---s~GIG~aia~~la~~--G--a~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (274)
T d1xhla_           2 FSGKSVIITGS---SNGIGRSAAVIFAKE--G--AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI   74 (274)
T ss_dssp             CTTCEEEETTC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHH
Confidence            78888877762   222001144455554  3  789999987642211          113467899999999999988


Q ss_pred             hh-------cCcEEEecccccc
Q psy1304         123 AK-------KCRVILNCVGPYT  137 (184)
Q Consensus       123 l~-------~~dVVIN~aGPf~  137 (184)
                      ++       +.|++||++|...
T Consensus        75 ~~~~~~~~G~iDilVnnAG~~~   96 (274)
T d1xhla_          75 INTTLAKFGKIDILVNNAGANL   96 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHcCCceEEEeeccccc
Confidence            76       4699999999653

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=94.76  E-value=0.0071  Score=47.95  Aligned_cols=78  Identities=13%  Similarity=0.204  Sum_probs=51.3

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----------CCCCCCEEEEeCCCHHHHHH
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----------NLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----------~~~~v~~v~vDv~D~~sL~a  121 (184)
                      -|+||+.-|-|-   ++|----++..|++..    .+|.+.+|+++...+          ...++.++++|+.|++++++
T Consensus         2 rl~gKvalVTGa---s~GIG~aia~~la~~G----a~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~   74 (264)
T d1spxa_           2 RFAEKVAIITGS---SNGIGRATAVLFAREG----AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDE   74 (264)
T ss_dssp             TTTTCEEEETTT---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEeCc---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHH
Confidence            478888887762   2331111344444443    789999987643211          11347789999999999998


Q ss_pred             Hhh-------cCcEEEeccccc
Q psy1304         122 MAK-------KCRVILNCVGPY  136 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGPf  136 (184)
                      +++       +.|++||++|..
T Consensus        75 ~~~~~~~~~g~iDilvnnAG~~   96 (264)
T d1spxa_          75 ILSTTLGKFGKLDILVNNAGAA   96 (264)
T ss_dssp             HHHHHHHHHSCCCEEEECCC--
T ss_pred             HHHHHHHHhCCCCEeecccccc
Confidence            886       479999999954

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=94.69  E-value=0.0043  Score=49.68  Aligned_cols=79  Identities=13%  Similarity=0.101  Sum_probs=52.1

Q ss_pred             ccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccc-cc-------cCCCCCCEEEEeCCCHHHHHHHh
Q psy1304          52 PFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCL-YR-------ENLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~l-g~-------~~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .|+||+.-|.|-   ++|--.-++..|++.  +  .+|.+.+|+.+. .+       ....++.++++|+.|++++++++
T Consensus         4 dL~gK~alITGa---s~GIG~aia~~la~~--G--~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~   76 (261)
T d1geea_           4 DLEGKVVVITGS---STGLGKSMAIRFATE--K--AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLV   76 (261)
T ss_dssp             GGTTCEEEETTC---SSHHHHHHHHHHHHT--T--CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCEEEEeCC---CcHHHHHHHHHHHHC--C--CEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            378888888762   222001134444444  3  789999987531 11       11145778999999999999888


Q ss_pred             h-------cCcEEEecccccc
Q psy1304         124 K-------KCRVILNCVGPYT  137 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf~  137 (184)
                      +       +.|++||++|-..
T Consensus        77 ~~~~~~~G~iDiLVnnAG~~~   97 (261)
T d1geea_          77 QSAIKEFGKLDVMINNAGLEN   97 (261)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHhCCCCEeeccceecC
Confidence            6       4799999998653

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.66  E-value=0.0085  Score=47.32  Aligned_cols=59  Identities=10%  Similarity=0.066  Sum_probs=43.9

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++.+|++..    .++++.+|+++..++       ...++.++++|+.|+++++++++       +.|++||+||-.
T Consensus        17 ia~~la~~G----a~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~   89 (255)
T d1gega_          17 IALRLVKDG----FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVA   89 (255)
T ss_dssp             HHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCC
T ss_pred             HHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeccccc
Confidence            566666654    789999987643221       12567889999999999998876       489999999843

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=94.53  E-value=0.0083  Score=47.65  Aligned_cols=85  Identities=7%  Similarity=0.075  Sum_probs=57.5

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeCCCHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADLKNESS  118 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv~D~~s  118 (184)
                      +.-+.-|+||+.-|.|--   +|----++..|++..    .+|.+.+|+.+...        ....+..++.+|+.|+++
T Consensus        17 ~~~~~~l~gK~alITGas---~GIG~aiA~~la~~G----a~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~   89 (294)
T d1w6ua_          17 MLPPNSFQGKVAFITGGG---TGLGKGMTTLLSSLG----AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDM   89 (294)
T ss_dssp             CSCTTTTTTCEEEEETTT---SHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHH
T ss_pred             CCCCCCCCCCEEEEeCCC---CHHHHHHHHHHHHcC----CEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHH
Confidence            345578999999998732   220011444444444    78999998763211        112557789999999999


Q ss_pred             HHHHhh-------cCcEEEeccccccc
Q psy1304         119 ILIMAK-------KCRVILNCVGPYTW  138 (184)
Q Consensus       119 L~a~l~-------~~dVVIN~aGPf~~  138 (184)
                      ++++++       +.|++||++|....
T Consensus        90 v~~~~~~~~~~~g~iDilvnnAg~~~~  116 (294)
T d1w6ua_          90 VQNTVSELIKVAGHPNIVINNAAGNFI  116 (294)
T ss_dssp             HHHHHHHHHHHTCSCSEEEECCCCCCC
T ss_pred             HHHHhhhhhhhccccchhhhhhhhccc
Confidence            988765       47999999997644

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=94.50  E-value=0.0053  Score=48.78  Aligned_cols=79  Identities=10%  Similarity=0.082  Sum_probs=53.0

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhhc---
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAKK---  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~~---  125 (184)
                      |+||+.-|.|-   .+|----++..|++..    .+|.+.+|+++..++    ...+..++++|+.|+++++++++.   
T Consensus         4 L~gK~alITGa---s~GIG~aia~~la~~G----a~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   76 (253)
T d1hxha_           4 LQGKVALVTGG---ASGVGLEVVKLLLGEG----AKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             TTTCEEEETTT---TSHHHHHHHHHHHHTT----CEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHH
Confidence            78888888772   2330011444444443    789999987643221    114567888999999999988764   


Q ss_pred             ----CcEEEeccccccc
Q psy1304         126 ----CRVILNCVGPYTW  138 (184)
Q Consensus       126 ----~dVVIN~aGPf~~  138 (184)
                          .|++||++|.+..
T Consensus        77 ~~g~iDilVnnAG~~~~   93 (253)
T d1hxha_          77 RLGTLNVLVNNAGILLP   93 (253)
T ss_dssp             HHCSCCEEEECCCCCCC
T ss_pred             HhCCCCeEEecccccCC
Confidence                7999999997643

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.47  E-value=0.013  Score=45.71  Aligned_cols=60  Identities=18%  Similarity=0.094  Sum_probs=42.9

Q ss_pred             hhhhhh-CCCCCceeEEeeeeccccccc------CCCCCCEEEEeCCCHHHHHHHhh---------cCcEEEeccccc
Q psy1304          75 SAYKAD-APTSNLTRLGLLGARDCLYRE------NLIDIPIIIADLKNESSILIMAK---------KCRVILNCVGPY  136 (184)
Q Consensus        75 ~~~La~-~~~~~~~~iaLAGrr~~lg~~------~~~~v~~v~vDv~D~~sL~a~l~---------~~dVVIN~aGPf  136 (184)
                      +..|++ +..+  .+|.+.+|+++..++      ..+++.++.+|+.|+++++++++         +.|++||++|-+
T Consensus        19 a~~l~~~a~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~   94 (248)
T d1snya_          19 VKALLNLPQPP--QHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIA   94 (248)
T ss_dssp             HHHHHTSSSCC--SEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCC
T ss_pred             HHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeecccc
Confidence            334443 3456  789999998754321      12578899999999999887765         379999999843

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.44  E-value=0.018  Score=44.68  Aligned_cols=88  Identities=10%  Similarity=0.161  Sum_probs=60.9

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeee--ecc---c-ccccCCCCCCEEEEeCCCHHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLG--ARD---C-LYRENLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAG--rr~---~-lg~~~~~~v~~v~vDv~D~~sL~  120 (184)
                      |-+.++|=|+-                ++.+|.+..-.  +.. +--  ++.   . .......+++++++|+.|.+++.
T Consensus         5 VTGatGfIGs~----------------lv~~Ll~~g~~--V~~-id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~   65 (338)
T d1orra_           5 ITGGCGFLGSN----------------LASFALSQGID--LIV-FDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVT   65 (338)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTTCE--EEE-EECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHH
T ss_pred             EECCCcHHHHH----------------HHHHHHHCcCE--EEE-EECCCcccchhHHHHhhccCCcEEEEcccCCHHHHH
Confidence            46778888887                77888765423  321 210  111   0 01113367999999999999999


Q ss_pred             HHhhcC--cEEEeccccccccc----------------hHHHHHHHHcCCC
Q psy1304         121 IMAKKC--RVILNCVGPYTWYG----------------EAVVKACIEAKTH  153 (184)
Q Consensus       121 a~l~~~--dVVIN~aGPf~~~g----------------~~VaeACieAGth  153 (184)
                      ++++++  |+|||||++.....                .+++++|.+.++.
T Consensus        66 ~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~  116 (338)
T d1orra_          66 RLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN  116 (338)
T ss_dssp             HHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccccc
Confidence            999875  99999998865432                4688899998886

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.0073  Score=47.98  Aligned_cols=77  Identities=18%  Similarity=0.195  Sum_probs=53.5

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhh--CCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKAD--APTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~--~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .+||+.-|-|-   ++|    |-.++|+  +--+  .+|.+.+|+.+..+       ....++.++.||+.|++++++++
T Consensus         5 l~Gkv~lITGa---s~G----IG~~ia~~la~~G--~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   75 (244)
T d1yb1a_           5 VTGEIVLITGA---GHG----IGRLTAYEFAKLK--SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSA   75 (244)
T ss_dssp             CTTCEEEEETT---TSH----HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCC---CcH----HHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence            67888888762   222    4444442  1223  78999998764321       12256789999999999999887


Q ss_pred             h-------cCcEEEeccccccc
Q psy1304         124 K-------KCRVILNCVGPYTW  138 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf~~  138 (184)
                      +       +.|++||++|-...
T Consensus        76 ~~i~~~~g~idilinnag~~~~   97 (244)
T d1yb1a_          76 KKVKAEIGDVSILVNNAGVVYT   97 (244)
T ss_dssp             HHHHHHTCCCSEEEECCCCCCC
T ss_pred             HHHHHHcCCCceeEeecccccc
Confidence            6       48999999996644

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=93.91  E-value=0.0084  Score=47.64  Aligned_cols=78  Identities=15%  Similarity=0.114  Sum_probs=50.9

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------CCCCCCEEEEeCCCHHHHHHHhh-
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------NLIDIPIIIADLKNESSILIMAK-  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~~~~v~~v~vDv~D~~sL~a~l~-  124 (184)
                      ++||+.-|.|-   ++|----++..|++.  +  .+|.+.+|+++...+       ...+..++++|+.|+++++++++ 
T Consensus         6 L~GK~alITGa---s~GIG~aia~~la~~--G--a~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   78 (259)
T d2ae2a_           6 LEGCTALVTGG---SRGIGYGIVEELASL--G--ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT   78 (259)
T ss_dssp             CTTCEEEEESC---SSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHH
Confidence            46888777762   222001144555554  3  789999987643221       12456788999999999888764 


Q ss_pred             -------cCcEEEecccccc
Q psy1304         125 -------KCRVILNCVGPYT  137 (184)
Q Consensus       125 -------~~dVVIN~aGPf~  137 (184)
                             ..|++||++|...
T Consensus        79 ~~~~~~~~idilvnnAG~~~   98 (259)
T d2ae2a_          79 VANHFHGKLNILVNNAGIVI   98 (259)
T ss_dssp             HHHHTTTCCCEEEECCCCCC
T ss_pred             HHHHhCCCceEEEECCceec
Confidence                   3699999999553

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.67  E-value=0.021  Score=45.05  Aligned_cols=77  Identities=13%  Similarity=0.057  Sum_probs=52.3

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhh--CCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKAD--APTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~--~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      +.||+.-|.|-   ++|    |-.++|+  +-.+  .++.+.+|+++...       ....++.++++|+.|++++++++
T Consensus         8 lenKvalITGa---s~G----IG~a~a~~la~~G--a~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~   78 (251)
T d2c07a1           8 GENKVALVTGA---GRG----IGREIAKMLAKSV--SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVI   78 (251)
T ss_dssp             CSSCEEEEEST---TSH----HHHHHHHHHTTTS--SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCH----HHHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            45777666651   223    5455553  2233  78999998764221       12246789999999999999888


Q ss_pred             h-------cCcEEEeccccccc
Q psy1304         124 K-------KCRVILNCVGPYTW  138 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf~~  138 (184)
                      +       +.|++||++|....
T Consensus        79 ~~~~~~~g~iDilvnnag~~~~  100 (251)
T d2c07a1          79 NKILTEHKNVDILVNNAGITRD  100 (251)
T ss_dssp             HHHHHHCSCCCEEEECCCCCCC
T ss_pred             HHHHHhcCCceeeeeccccccc
Confidence            6       58999999986644

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.67  E-value=0.015  Score=45.80  Aligned_cols=62  Identities=8%  Similarity=-0.017  Sum_probs=44.3

Q ss_pred             hhhhhhhCCCCCceeEEeeeeccccccc-------C--CCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYRE-------N--LIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~~-------~--~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      ++..|++.  +  .+|.+.+|+.+...+       .  ..++.++++|+.|+++++++++       +.|++||+||.+.
T Consensus        19 ia~~la~~--G--a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~   94 (254)
T d2gdza1          19 FAEALLLK--G--AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN   94 (254)
T ss_dssp             HHHHHHHT--T--CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeecccccccc
Confidence            44455544  3  789999987642211       1  1356788999999999998875       4799999999875


Q ss_pred             cc
Q psy1304         138 WY  139 (184)
Q Consensus       138 ~~  139 (184)
                      ..
T Consensus        95 ~~   96 (254)
T d2gdza1          95 EK   96 (254)
T ss_dssp             SS
T ss_pred             cc
Confidence            53

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=93.49  E-value=0.014  Score=45.98  Aligned_cols=82  Identities=15%  Similarity=0.144  Sum_probs=53.0

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecc-cccc-------cCCCCCCEEEEeCCCHHHHHH
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARD-CLYR-------ENLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~-~lg~-------~~~~~v~~v~vDv~D~~sL~a  121 (184)
                      |.|-+||+.-|-|-   ++|----++..|++..    .++.+..+++ ...+       ..-.++..+.+|+.|++++++
T Consensus         1 ~~~L~GK~alITGa---s~GIG~aia~~la~~G----~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~   73 (259)
T d1ja9a_           1 SKPLAGKVALTTGA---GRGIGRGIAIELGRRG----ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVA   73 (259)
T ss_dssp             CCTTTTCEEEETTT---TSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCCCCCEEEEeCC---CCHHHHHHHHHHHHcC----CEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHH
Confidence            56788999888772   2330112444444444    6677754433 2111       112567889999999999999


Q ss_pred             Hhh-------cCcEEEeccccccc
Q psy1304         122 MAK-------KCRVILNCVGPYTW  138 (184)
Q Consensus       122 ~l~-------~~dVVIN~aGPf~~  138 (184)
                      +++       +-|++||++|.+..
T Consensus        74 ~~~~~~~~~g~idilinnag~~~~   97 (259)
T d1ja9a_          74 LFDKAVSHFGGLDFVMSNSGMEVW   97 (259)
T ss_dssp             HHHHHHHHHSCEEEEECCCCCCCC
T ss_pred             HHHHHHHHcCCCcEEEeccccccc
Confidence            887       47999999997643

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.25  E-value=0.055  Score=42.58  Aligned_cols=78  Identities=6%  Similarity=0.004  Sum_probs=52.7

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhhc--CcEEEecccccccc------
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAKK--CRVILNCVGPYTWY------  139 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~------  139 (184)
                      ++.+|.+...+  +.  .-.|+.....      .....++++++|+.|++.+.+++++  .++|++++++....      
T Consensus        24 lv~~Ll~~g~~--V~--~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~   99 (356)
T d1rkxa_          24 LSLWLQTMGAT--VK--GYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEP   99 (356)
T ss_dssp             HHHHHHHTTCE--EE--EEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCH
T ss_pred             HHHHHHHCCCE--EE--EEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhhccccccccccCC
Confidence            66777766655  33  2224332111      0125799999999999999999885  58999999864331      


Q ss_pred             ----------chHHHHHHHHcCCCEe
Q psy1304         140 ----------GEAVVKACIEAKTHHV  155 (184)
Q Consensus       140 ----------g~~VaeACieAGthYV  155 (184)
                                -.+++++|.+.+..++
T Consensus       100 ~~~~~~Nv~g~~n~l~~~~~~~~~~~  125 (356)
T d1rkxa_         100 VETYSTNVMGTVYLLEAIRHVGGVKA  125 (356)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHCCCCE
T ss_pred             ccccccccccchhhhhhhhccccccc
Confidence                      1578899999886643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.17  E-value=0.018  Score=45.01  Aligned_cols=82  Identities=11%  Similarity=0.152  Sum_probs=52.6

Q ss_pred             cCccccceeeecccccCCCCCCCchhhhhhhC-CCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHH
Q psy1304          50 SQPFRGQTLSVQDKIRPGRGSNPRPSAYKADA-PTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSI  119 (184)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~-~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL  119 (184)
                      |..++||+.-|.|-   .+|----++..||+. ..+  .+|.+.+|+.+..++         ...++.++++|+.|++++
T Consensus         1 ~~~L~gKvalITGa---s~GIG~aiA~~lA~~~~~G--~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v   75 (259)
T d1oaaa_           1 ADGLGCAVCVLTGA---SRGFGRALAPQLARLLSPG--SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGV   75 (259)
T ss_dssp             CCCCBSEEEEESSC---SSHHHHHHHHHHHTTBCTT--CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHH
T ss_pred             CCCCCCCEEEEeCC---CCHHHHHHHHHHHhcccCC--CEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHH
Confidence            35677787767662   122001145555553 356  899999987643221         113567899999999999


Q ss_pred             HHHhh-----------cCcEEEeccccc
Q psy1304         120 LIMAK-----------KCRVILNCVGPY  136 (184)
Q Consensus       120 ~a~l~-----------~~dVVIN~aGPf  136 (184)
                      +++++           ..|++||++|.+
T Consensus        76 ~~l~~~~~~~~~~~~~~~~~lvnnag~~  103 (259)
T d1oaaa_          76 QRLLSAVRELPRPEGLQRLLLINNAATL  103 (259)
T ss_dssp             HHHHHHHHHSCCCTTCCEEEEEECCCCC
T ss_pred             HHHHHHHHHhhhhccCceEEEEeccccc
Confidence            98874           246899998854

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=93.07  E-value=0.026  Score=42.81  Aligned_cols=47  Identities=26%  Similarity=0.247  Sum_probs=35.8

Q ss_pred             EeCCCHHHHHHHhhc--CcEEEeccccccc------------c----chHHHHHHHHcCCCEeeC
Q psy1304         111 ADLKNESSILIMAKK--CRVILNCVGPYTW------------Y----GEAVVKACIEAKTHHVDI  157 (184)
Q Consensus       111 vDv~D~~sL~a~l~~--~dVVIN~aGPf~~------------~----g~~VaeACieAGthYVDl  157 (184)
                      .|+.|.+.+++++++  +|+||||||....            .    ...+.++|.+.+++++-+
T Consensus        38 ~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  102 (298)
T d1n2sa_          38 GDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHY  102 (298)
T ss_dssp             CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEE
T ss_pred             CcCCCHHHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhccccccccc
Confidence            589999999999986  5999999984321            0    157888999998875443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.82  E-value=0.028  Score=45.59  Aligned_cols=79  Identities=14%  Similarity=0.127  Sum_probs=52.8

Q ss_pred             CccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc------------cCCCCCCEEEEeCCCHHH
Q psy1304          51 QPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR------------ENLIDIPIIIADLKNESS  118 (184)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~------------~~~~~v~~v~vDv~D~~s  118 (184)
                      ..++||+.-|.|-   ++|----++..|++.  +  .+|.+.+|+.+...            ....++.++++|+.|+++
T Consensus         8 g~L~gKvalITGa---s~GIG~aia~~la~~--G--a~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~   80 (297)
T d1yxma1           8 GLLQGQVAIVTGG---ATGIGKAIVKELLEL--G--SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEE   80 (297)
T ss_dssp             TTTTTCEEEEETT---TSHHHHHHHHHHHHT--T--CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEeCC---CCHHHHHHHHHHHHC--C--CEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHH
Confidence            3488999888772   222001144455554  3  78999998753211            012457789999999999


Q ss_pred             HHHHhh-------cCcEEEeccccc
Q psy1304         119 ILIMAK-------KCRVILNCVGPY  136 (184)
Q Consensus       119 L~a~l~-------~~dVVIN~aGPf  136 (184)
                      ++++++       +.|++||++|-.
T Consensus        81 v~~~~~~~~~~~G~iDiLVnnAg~~  105 (297)
T d1yxma1          81 VNNLVKSTLDTFGKINFLVNNGGGQ  105 (297)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHhCCeEEEEeecccc
Confidence            998876       479999999854

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.69  E-value=0.086  Score=41.82  Aligned_cols=93  Identities=12%  Similarity=0.007  Sum_probs=63.7

Q ss_pred             hhccccccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc----ccCCCCCCEEEEeCCCH
Q psy1304          41 QRKEDRIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY----RENLIDIPIIIADLKNE  116 (184)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg----~~~~~~v~~v~vDv~D~  116 (184)
                      |+|-=.|.+.++|-|.-                ++.+|.+..-.  ++.  ..|+....    .....++++++.|+.|+
T Consensus         2 ~kktIlVtGatG~iG~~----------------lv~~Ll~~G~~--V~~--l~R~~~~~~~~~~~~~~~v~~~~gD~~d~   61 (350)
T d1xgka_           2 QKKTIAVVGATGRQGAS----------------LIRVAAAVGHH--VRA--QVHSLKGLIAEELQAIPNVTLFQGPLLNN   61 (350)
T ss_dssp             CCCCEEEESTTSHHHHH----------------HHHHHHHTTCC--EEE--EESCSCSHHHHHHHTSTTEEEEESCCTTC
T ss_pred             CCCEEEEECCChHHHHH----------------HHHHHHhCCCe--EEE--EECCcchhhhhhhcccCCCEEEEeeCCCc
Confidence            45555678889999988                78888876544  433  33432111    11336789999999885


Q ss_pred             H-HHHHHhhcCcEEEecccccccc----chHHHHHHHHcCCC
Q psy1304         117 S-SILIMAKKCRVILNCVGPYTWY----GEAVVKACIEAKTH  153 (184)
Q Consensus       117 ~-sL~a~l~~~dVVIN~aGPf~~~----g~~VaeACieAGth  153 (184)
                      . .+++++++++++.....+....    ..++++||.++|+.
T Consensus        62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~agv~  103 (350)
T d1xgka_          62 VPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTI  103 (350)
T ss_dssp             HHHHHHHHTTCSEEEECCCSTTSCHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHhcCCceEEeecccccchhhhhhhHHHHHHHHhCCC
Confidence            4 5788999999887766544333    37899999999973

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=92.44  E-value=0.054  Score=43.96  Aligned_cols=88  Identities=10%  Similarity=0.015  Sum_probs=58.9

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeec-----ccc-cccCCCCCCEEEEeCCCHHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGAR-----DCL-YRENLIDIPIIIADLKNESSIL  120 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr-----~~l-g~~~~~~v~~v~vDv~D~~sL~  120 (184)
                      |.+.++|=|.-                ++.+|.+....  +-+++--+.     +.+ ......+++++..|+.|+.++.
T Consensus         5 ItG~tGfIGs~----------------l~~~L~~~g~~--vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~   66 (361)
T d1kewa_           5 ITGGAGFIGSA----------------VVRHIIKNTQD--TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEIT   66 (361)
T ss_dssp             EESTTSHHHHH----------------HHHHHHHHCSC--EEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHH
T ss_pred             EECCCcHHHHH----------------HHHHHHHCCCC--EEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHH
Confidence            56778888887                77888876655  333332111     111 1112257889999999999999


Q ss_pred             HHhhc--CcEEEecccccccc----------------chHHHHHHHHcCC
Q psy1304         121 IMAKK--CRVILNCVGPYTWY----------------GEAVVKACIEAKT  152 (184)
Q Consensus       121 a~l~~--~dVVIN~aGPf~~~----------------g~~VaeACieAGt  152 (184)
                      .++++  +|+|+|||++....                -..++++|.+.|+
T Consensus        67 ~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~  116 (361)
T d1kewa_          67 RIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWS  116 (361)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99885  89999999754311                1368899988764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=92.03  E-value=0.017  Score=46.13  Aligned_cols=77  Identities=12%  Similarity=0.145  Sum_probs=51.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc----CCCCCCEEEEeCCCHHHHHHHhh----
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE----NLIDIPIIIADLKNESSILIMAK----  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~----~~~~v~~v~vDv~D~~sL~a~l~----  124 (184)
                      ++||+.-|.|-   .+|----++..|++..    .+|.+.+|+.+...+    ...++..+++|+.|+++++++++    
T Consensus         3 L~gK~alITGa---s~GIG~aia~~la~~G----a~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           3 LKGEAVLITGG---ASGLGRALVDRFVAEG----AKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             TTTCEEEEETT---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHH
Confidence            57787777661   1220011444454443    789999987643221    11457889999999999988875    


Q ss_pred             ---cCcEEEeccccc
Q psy1304         125 ---KCRVILNCVGPY  136 (184)
Q Consensus       125 ---~~dVVIN~aGPf  136 (184)
                         +.|++||++|.+
T Consensus        76 ~~g~idilvnnAG~~   90 (276)
T d1bdba_          76 RFGKIDTLIPNAGIW   90 (276)
T ss_dssp             HHSCCCEEECCCCCC
T ss_pred             HhCCccccccccccc
Confidence               479999999954

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=91.89  E-value=0.68  Score=33.27  Aligned_cols=53  Identities=6%  Similarity=-0.005  Sum_probs=38.0

Q ss_pred             cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         125 KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       125 ~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      +.|+|+-|..|...  ..++.+|+++|.| +++  ++-+..   +. .++-+.|++.|+.+.
T Consensus        62 ~iD~V~I~tp~~~H--~~~~~~al~~gk~V~~EKP~~~~~~---e~-~~l~~~a~~~~~~~~  117 (167)
T d1xeaa1          62 GVDAVMIHAATDVH--STLAAFFLHLGIPTFVDKPLAASAQ---EC-ENLYELAEKHHQPLY  117 (167)
T ss_dssp             CCSEEEECSCGGGH--HHHHHHHHHTTCCEEEESCSCSSHH---HH-HHHHHHHHHTTCCEE
T ss_pred             ccceeccccccccc--ccccccccccccccccCCCCcCCHH---HH-HHHHHHHHHcCCEEE
Confidence            68999999866655  4899999999999 665  444433   33 456667888887653

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=91.82  E-value=0.051  Score=42.60  Aligned_cols=61  Identities=13%  Similarity=-0.047  Sum_probs=41.8

Q ss_pred             hhhhhhhCCCCCceeEEeee-ecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEeccccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLG-ARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYTW  138 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAG-rr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~~  138 (184)
                      ++..|++..    .++.+.. |+++..+       ....++.++++|+.|+++++++++       +.|++||+||.+..
T Consensus        17 ~a~~la~~G----a~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~   92 (244)
T d1edoa_          17 IALSLGKAG----CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRD   92 (244)
T ss_dssp             HHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCC
T ss_pred             HHHHHHHCC----CEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccc
Confidence            555566554    6777764 4332111       011467789999999999998876       47999999997754

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.78  E-value=0.16  Score=37.62  Aligned_cols=91  Identities=11%  Similarity=0.039  Sum_probs=60.1

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhC--CCCCceeEEeeeecccccccCC-CCCCEEEEeCCCHHHHHHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADA--PTSNLTRLGLLGARDCLYRENL-IDIPIIIADLKNESSILIM  122 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~--~~~~~~~iaLAGrr~~lg~~~~-~~v~~v~vDv~D~~sL~a~  122 (184)
                      .|.+.+++.||.                +...|...  .|-  ..+.+.+.++..+.... ..-.....++.+.+.    
T Consensus         5 aIvGATG~VGqe----------------li~~Ll~~~~~p~--~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~----   62 (146)
T d1t4ba1           5 GFIGWRGMVGSV----------------LMQRMVEERDFDA--IRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA----   62 (146)
T ss_dssp             EEESTTSHHHHH----------------HHHHHHHTTGGGG--SEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH----
T ss_pred             EEECCccHHHHH----------------HHHHHHhCCCCCe--eEEEEeeccccccccccccCCceeeecccchhh----
Confidence            467889999997                56666633  355  67776655554443211 223334445555433    


Q ss_pred             hhcCcEEEeccccccccchHHHHHHHHcCCC--EeeCCCC
Q psy1304         123 AKKCRVILNCVGPYTWYGEAVVKACIEAKTH--HVDITGE  160 (184)
Q Consensus       123 l~~~dVVIN~aGPf~~~g~~VaeACieAGth--YVDltGE  160 (184)
                      ++++|+|+.|++  .......+..+.++|++  .+|.+.+
T Consensus        63 ~~~~DivF~a~~--~~~s~~~~~~~~~~g~~~~VID~Ss~  100 (146)
T d1t4ba1          63 LKALDIIVTCQG--GDYTNEIYPKLRESGWQGYWIDAASS  100 (146)
T ss_dssp             HHTCSEEEECSC--HHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             hhcCcEEEEecC--chHHHHhhHHHHhcCCCeecccCCcc
Confidence            579999999994  34457888889999986  7899874

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=91.24  E-value=0.046  Score=43.01  Aligned_cols=79  Identities=15%  Similarity=0.149  Sum_probs=52.5

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc--------ccCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY--------RENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg--------~~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      .+||+.-|.|-   .+|----++..|++..    .++.+.+++....        .....++.++++|+.|++++.++++
T Consensus        16 L~gK~~lITGa---s~GIG~aia~~la~~G----a~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~   88 (272)
T d1g0oa_          16 LEGKVALVTGA---GRGIGREMAMELGRRG----CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE   88 (272)
T ss_dssp             CTTCEEEETTT---TSHHHHHHHHHHHHTT----CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHcC----CEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHH
Confidence            78888888773   2230111444555543    7888887764211        1122568899999999999999876


Q ss_pred             c-------CcEEEeccccccc
Q psy1304         125 K-------CRVILNCVGPYTW  138 (184)
Q Consensus       125 ~-------~dVVIN~aGPf~~  138 (184)
                      .       .|++||++|....
T Consensus        89 ~~~~~~g~idilV~nag~~~~  109 (272)
T d1g0oa_          89 EAVKIFGKLDIVCSNSGVVSF  109 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHhCCCCccccccccchh
Confidence            3       6999999986644

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=91.17  E-value=1.2  Score=33.76  Aligned_cols=59  Identities=10%  Similarity=0.006  Sum_probs=41.4

Q ss_pred             HHHHhh--cCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAK--KCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~--~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++++++  +.|+|+-|..|+..  ..++..|+++|.| |++  ++...+   ++ +++.+.|+++|+.+.
T Consensus        92 ~~ell~~~~iD~V~I~tp~~~H--~~~~~~al~~gk~v~~EKPla~~~~---e~-~~l~~~a~~~~~~~~  155 (221)
T d1h6da1          92 FDKIAKDPKIDAVYIILPNSLH--AEFAIRAFKAGKHVMCEKPMATSVA---DC-QRMIDAAKAANKKLM  155 (221)
T ss_dssp             GGGGGGCTTCCEEEECSCGGGH--HHHHHHHHHTTCEEEECSSCCSSHH---HH-HHHHHHHHHHTCCEE
T ss_pred             hhhhcccccceeeeeccchhhh--hhHHHHhhhcchhhhcCCCccCCHH---HH-HHHHHHHHhcCCcEE
Confidence            344554  47899999877655  4889999999999 777  444443   33 456677888887653

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=90.94  E-value=0.038  Score=43.74  Aligned_cols=76  Identities=14%  Similarity=0.147  Sum_probs=50.4

Q ss_pred             ccceeeecccccCCCCCCCchhhhhhhC--CCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          54 RGQTLSVQDKIRPGRGSNPRPSAYKADA--PTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~r~~~~La~~--~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      +||+.-|-|-   .+|    |-.++|+.  -.+  .+|.+.+|+++...       ....++.++.+|+.|+++++++++
T Consensus         5 ~gK~alITGa---s~G----IG~aia~~la~~G--~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~   75 (258)
T d1ae1a_           5 KGTTALVTGG---SKG----IGYAIVEELAGLG--ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQ   75 (258)
T ss_dssp             TTCEEEEESC---SSH----HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCC---CCH----HHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHH
Confidence            6887777762   222    54444422  223  68999998763221       122556788999999999888764


Q ss_pred             --------cCcEEEeccccccc
Q psy1304         125 --------KCRVILNCVGPYTW  138 (184)
Q Consensus       125 --------~~dVVIN~aGPf~~  138 (184)
                              ..|++||++|....
T Consensus        76 ~~~~~~~g~idilinnag~~~~   97 (258)
T d1ae1a_          76 TVAHVFDGKLNILVNNAGVVIH   97 (258)
T ss_dssp             HHHHHTTSCCCEEEECCCCCCC
T ss_pred             HHHHHhCCCcEEEecccccccc
Confidence                    27899999997654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=90.77  E-value=0.048  Score=41.91  Aligned_cols=79  Identities=15%  Similarity=0.193  Sum_probs=48.2

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccc-----ccCCCCCCEEEEeCCCHHHHHHHhhc--
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLY-----RENLIDIPIIIADLKNESSILIMAKK--  125 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg-----~~~~~~v~~v~vDv~D~~sL~a~l~~--  125 (184)
                      .+||+.-|.|-- -+||--.-+|..||+..    .+|+|.+|+++..     +..-.+...+++|+.|+++++++++.  
T Consensus         4 l~gK~~lItGaa-g~~GIG~aiA~~la~~G----a~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           4 LDGKRILVSGII-TDSSIAFHIARVAQEQG----AQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             TTTCEEEECCCS-STTCHHHHHHHHHHHTT----CEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCC-CCCHHHHHHHHHHHHcC----CEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhh
Confidence            567777776510 01220001445555544    7889988865432     11125678999999999877666432  


Q ss_pred             --------CcEEEeccccc
Q psy1304         126 --------CRVILNCVGPY  136 (184)
Q Consensus       126 --------~dVVIN~aGPf  136 (184)
                              -|++||++|+.
T Consensus        79 ~~~~~~~~ld~~i~~ag~~   97 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFM   97 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCC
T ss_pred             hccccCCCcceeeeccccc
Confidence                    48999999954

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.72  E-value=0.012  Score=46.76  Aligned_cols=89  Identities=10%  Similarity=-0.046  Sum_probs=55.0

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEee----eecccccccCCCCCCEEEEeCCCHHHHHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLL----GARDCLYRENLIDIPIIIADLKNESSILI  121 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLA----Grr~~lg~~~~~~v~~v~vDv~D~~sL~a  121 (184)
                      .|-+.++|=|+-                ++.+|.+....  +.. +.    ++++.+.    .......+|+.|.+.++.
T Consensus         5 lVtG~sGfiG~~----------------lv~~L~~~g~~--V~~-~d~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~   61 (312)
T d2b69a1           5 LITGGAGFVGSH----------------LTDKLMMDGHE--VTV-VDNFFTGRKRNVE----HWIGHENFELINHDVVEP   61 (312)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHTTCE--EEE-EECCSSCCGGGTG----GGTTCTTEEEEECCTTSC
T ss_pred             EEECCCcHHHHH----------------HHHHHHHCcCE--EEE-EeCCCcCCHHHHH----HhcCCCceEEEehHHHHH
Confidence            457888999988                78888876544  222 21    1111111    112222334444444666


Q ss_pred             HhhcCcEEEecccccccc----------------chHHHHHHHHcCCCEeeC
Q psy1304         122 MAKKCRVILNCVGPYTWY----------------GEAVVKACIEAKTHHVDI  157 (184)
Q Consensus       122 ~l~~~dVVIN~aGPf~~~----------------g~~VaeACieAGthYVDl  157 (184)
                      ++.++|+|||||+.....                ..+++++|.+.|+++|-+
T Consensus        62 ~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~  113 (312)
T d2b69a1          62 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLA  113 (312)
T ss_dssp             CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             HHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            778999999999864321                158899999999987643

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.58  E-value=0.092  Score=40.44  Aligned_cols=63  Identities=8%  Similarity=-0.020  Sum_probs=44.1

Q ss_pred             hhhhhhhCCCCCceeEEeeeecccccc----------cCCCCCCEEEEeCCCHHHHHHHhhc------CcEEEecccccc
Q psy1304          74 PSAYKADAPTSNLTRLGLLGARDCLYR----------ENLIDIPIIIADLKNESSILIMAKK------CRVILNCVGPYT  137 (184)
Q Consensus        74 ~~~~La~~~~~~~~~iaLAGrr~~lg~----------~~~~~v~~v~vDv~D~~sL~a~l~~------~dVVIN~aGPf~  137 (184)
                      ++.+|++....   .|.|.||+.....          ....++.++.+|+.|++++.++++.      .|.|+|++|...
T Consensus        25 ~a~~la~~Ga~---~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~vv~~ag~~~  101 (259)
T d2fr1a1          25 IARWLARRGAP---HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLD  101 (259)
T ss_dssp             HHHHHHHHTCS---EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCC
T ss_pred             HHHHHHHCCCC---EEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccccccccccccccc
Confidence            56666665422   5888888642211          1114578999999999999999875      578999999765


Q ss_pred             cc
Q psy1304         138 WY  139 (184)
Q Consensus       138 ~~  139 (184)
                      ..
T Consensus       102 ~~  103 (259)
T d2fr1a1         102 DG  103 (259)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=90.36  E-value=0.045  Score=42.84  Aligned_cols=51  Identities=14%  Similarity=0.070  Sum_probs=37.1

Q ss_pred             eeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHHHHHhh-------cCcEEEecccccc
Q psy1304          87 TRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSILIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus        87 ~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL~a~l~-------~~dVVIN~aGPf~  137 (184)
                      ..+.+.+|+.+..+       ....+..++.+|+.|+++++++++       +.|++||++|-+.
T Consensus        33 ~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~   97 (240)
T d2bd0a1          33 PVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR   97 (240)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCC
T ss_pred             cEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeeccccccc
Confidence            45788888653221       112456789999999999998876       4799999999654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.29  E-value=0.18  Score=37.18  Aligned_cols=89  Identities=12%  Similarity=0.106  Sum_probs=58.4

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHh-h
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMA-K  124 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l-~  124 (184)
                      .|.+.++|-|+-                ++.+|.+.+--  .+|....|+...      ..+.+..+..|..++...+ .
T Consensus         6 lItGatG~iG~~----------------lv~~L~~~~~~--~~v~~~~r~~~~------~~~~~~~~~~d~~~~~~~~~~   61 (212)
T d2a35a1           6 LLAGATGLTGEH----------------LLDRILSEPTL--AKVIAPARKALA------EHPRLDNPVGPLAELLPQLDG   61 (212)
T ss_dssp             EEECTTSHHHHH----------------HHHHHHHCTTC--CEEECCBSSCCC------CCTTEECCBSCHHHHGGGCCS
T ss_pred             EEECCCcHHHHH----------------HHHHHHhCCCe--EEEEEEeCCchh------hcccccccccchhhhhhcccc
Confidence            468889999988                78888866543  566555454322      2233445555655554444 4


Q ss_pred             cCcEEEeccccccccc--------------hHHHHHHHHcCCC-EeeCC
Q psy1304         125 KCRVILNCVGPYTWYG--------------EAVVKACIEAKTH-HVDIT  158 (184)
Q Consensus       125 ~~dVVIN~aGPf~~~g--------------~~VaeACieAGth-YVDlt  158 (184)
                      .+|.|++|+|......              ..++++|.+.++. .+.++
T Consensus        62 ~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~S  110 (212)
T d2a35a1          62 SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVS  110 (212)
T ss_dssp             CCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             chheeeeeeeeeccccccccccccchhhhhhhccccccccccccccccc
Confidence            5899999998763221              5789999999987 55544

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=90.03  E-value=0.25  Score=39.61  Aligned_cols=52  Identities=10%  Similarity=0.039  Sum_probs=41.4

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh---cCcEEEecccccccc----------------chHHHHHHHHcCCCEe
Q psy1304         104 IDIPIIIADLKNESSILIMAK---KCRVILNCVGPYTWY----------------GEAVVKACIEAKTHHV  155 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~---~~dVVIN~aGPf~~~----------------g~~VaeACieAGthYV  155 (184)
                      ....+++.|+.|.+.|+++++   ++|+|+|+|++....                ...++++|...++..+
T Consensus        69 ~~~~~~~~Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~  139 (383)
T d1gy8a_          69 RYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKI  139 (383)
T ss_dssp             CCCEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             cceEEEECcccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccc
Confidence            457799999999999999987   469999999864321                1577889999997744

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=89.48  E-value=0.16  Score=37.22  Aligned_cols=92  Identities=13%  Similarity=0.047  Sum_probs=60.1

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCC-CCCceeEEeeeecccccccCC-CCCCEEEEeCCCHHHHHHHh
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAP-TSNLTRLGLLGARDCLYRENL-IDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~-~~~~~~iaLAGrr~~lg~~~~-~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .|.+.++|.|+.                +..-|++++ |.  ..+.+.+-++..|..-. ........+..+     ...
T Consensus         5 aIvGATGyvG~e----------------LirlL~~H~fp~--~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~-----~~~   61 (154)
T d2gz1a1           5 AVVGATGAVGAQ----------------MIKMLEESTLPI--DKIRYLASARSAGKSLKFKDQDITIEETTE-----TAF   61 (154)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHTCCSCE--EEEEEEECGGGTTCEEEETTEEEEEEECCT-----TTT
T ss_pred             EEECCCcHHHHH----------------HHHHHHcCCCCc--eEEEEecccccccccccccCCcccccccch-----hhh
Confidence            467899999998                677888665 77  77776654444443211 112222223322     234


Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChH
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPY  162 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~  162 (184)
                      .+.|++..|+++-.  ....+....+.|+..||++++..
T Consensus        62 ~~~d~~f~~~~~~~--s~~~~~~~~~~~~~VIDlSsdfR   98 (154)
T d2gz1a1          62 EGVDIALFSAGSST--SAKYAPYAVKAGVVVVDNTSYFR   98 (154)
T ss_dssp             TTCSEEEECSCHHH--HHHHHHHHHHTTCEEEECSSTTT
T ss_pred             hhhhhhhhccCccc--hhhHHhhhccccceehhcChhhh
Confidence            68999999986432  35777788899999999998643

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=89.38  E-value=0.28  Score=38.27  Aligned_cols=91  Identities=10%  Similarity=0.118  Sum_probs=60.8

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCC--ceeE-Ee-----eeecccccc-cCCCCCCEEEEeCCCHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSN--LTRL-GL-----LGARDCLYR-ENLIDIPIIIADLKNES  117 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~--~~~i-aL-----AGrr~~lg~-~~~~~v~~v~vDv~D~~  117 (184)
                      |.+.++|=|+-                ++.+|.+..-.-  .-++ .+     .+.+..+.. ....+++++..|..+..
T Consensus         5 ItG~tGfIG~~----------------l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   68 (322)
T d1r6da_           5 VTGGAGFIGSH----------------FVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAG   68 (322)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHH
T ss_pred             EECCCCHHHHH----------------HHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccch
Confidence            46788898887                777787543220  0121 11     122222211 12367889999999999


Q ss_pred             HHHHHhhcCcEEEeccccccccc----------------hHHHHHHHHcCCC
Q psy1304         118 SILIMAKKCRVILNCVGPYTWYG----------------EAVVKACIEAKTH  153 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~~~g----------------~~VaeACieAGth  153 (184)
                      .+......+|+|+++|++-....                ..++++|.+.++.
T Consensus        69 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~  120 (322)
T d1r6da_          69 LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG  120 (322)
T ss_dssp             HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCC
T ss_pred             hhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCc
Confidence            99999999999999997642211                5789999999875

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=89.18  E-value=0.058  Score=42.50  Aligned_cols=79  Identities=10%  Similarity=-0.009  Sum_probs=47.7

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc--------cCCCCCCEEEEeCC-CHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR--------ENLIDIPIIIADLK-NESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~--------~~~~~v~~v~vDv~-D~~sL~a~l  123 (184)
                      |+||+.-|.|-   .+|=---+|..|++..    .++.+.+|+.+...        ..-.++.+..+|+. |.+++++++
T Consensus         3 l~gK~vlITGg---s~GIG~~~A~~la~~G----~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   75 (254)
T d1sbya1           3 LTNKNVIFVAA---LGGIGLDTSRELVKRN----LKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLL   75 (254)
T ss_dssp             CTTCEEEEETT---TSHHHHHHHHHHHHTC----CSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHH
T ss_pred             CCCCEEEEecC---CCHHHHHHHHHHHHCC----CEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHH
Confidence            78888888772   2220011344444443    66666666553211        11145778999997 666677665


Q ss_pred             h-------cCcEEEeccccccc
Q psy1304         124 K-------KCRVILNCVGPYTW  138 (184)
Q Consensus       124 ~-------~~dVVIN~aGPf~~  138 (184)
                      .       +.|++||+||.+..
T Consensus        76 ~~~~~~~g~iDilvnnAG~~~~   97 (254)
T d1sbya1          76 KKIFDQLKTVDILINGAGILDD   97 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCT
T ss_pred             HHHHHHcCCCCEEEeCCCCCCH
Confidence            4       58999999996643

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=89.06  E-value=0.4  Score=35.53  Aligned_cols=92  Identities=12%  Similarity=-0.000  Sum_probs=58.3

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhh--hCCCCCceeEEeeeecccccccCC-CCCCEEEEeCCCHHHHHHH
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKA--DAPTSNLTRLGLLGARDCLYRENL-IDIPIIIADLKNESSILIM  122 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La--~~~~~~~~~iaLAGrr~~lg~~~~-~~v~~v~vDv~D~~sL~a~  122 (184)
                      .|.+.++|.|+.                ...-|.  +..|.  ..+.+...++..+.... ..-.....+..|.+    .
T Consensus         4 aIiGATGyvG~e----------------Li~lLl~~~~~p~--~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~~----~   61 (147)
T d1mb4a1           4 GLVGWRGMVGSV----------------LMQRMVEERDFDL--IEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIE----S   61 (147)
T ss_dssp             EEESCSSHHHHH----------------HHHHHHHTTGGGG--SEEEEEESSCCSSBCCCSSSCCCBCEETTCHH----H
T ss_pred             EEECCccHHHHH----------------HHHHHHhcCCCCc--eEEEEeccccccccccccCCcceeeecccchh----h
Confidence            467899999997                455555  23566  66665544444333221 22222333444543    3


Q ss_pred             hhcCcEEEeccccccccchHHHHHHHHcCCC--EeeCCCCh
Q psy1304         123 AKKCRVILNCVGPYTWYGEAVVKACIEAKTH--HVDITGEP  161 (184)
Q Consensus       123 l~~~dVVIN~aGPf~~~g~~VaeACieAGth--YVDltGE~  161 (184)
                      ++++|+|+.|++ - .....++....++|..  -||++++.
T Consensus        62 ~~~~DvvF~alp-~-~~s~~~~~~l~~~g~~~~VIDlSsdf  100 (147)
T d1mb4a1          62 LKQLDAVITCQG-G-SYTEKVYPALRQAGWKGYWIDAASTL  100 (147)
T ss_dssp             HTTCSEEEECSC-H-HHHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred             hccccEEEEecC-c-hHHHHHhHHHHHcCCceEEEeCCccc
Confidence            578999999984 3 3457888999999987  78999854

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=89.03  E-value=0.19  Score=38.74  Aligned_cols=80  Identities=13%  Similarity=0.056  Sum_probs=53.6

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhh--CCCCCceeEEeeeecccccc------cCCCCCCEEEEeCCCHHHHHHHhh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKAD--APTSNLTRLGLLGARDCLYR------ENLIDIPIIIADLKNESSILIMAK  124 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~--~~~~~~~~iaLAGrr~~lg~------~~~~~v~~v~vDv~D~~sL~a~l~  124 (184)
                      ++||+.-|-|-     +++.-|-.++|+  +-.+  .+|++.+|++.+.+      .......+.++|+.+++++.+++.
T Consensus         3 L~gK~alITGa-----ag~~GIG~AiA~~la~~G--a~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~   75 (274)
T d2pd4a1           3 LKGKKGLIVGV-----ANNKSIAYGIAQSCFNQG--ATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYN   75 (274)
T ss_dssp             TTTCEEEEECC-----CSTTSHHHHHHHHHHTTT--CEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECC-----CCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHH
Confidence            57888777761     111225555553  2333  88999998764221      122567889999999999888874


Q ss_pred             -------cCcEEEecccccccc
Q psy1304         125 -------KCRVILNCVGPYTWY  139 (184)
Q Consensus       125 -------~~dVVIN~aGPf~~~  139 (184)
                             ..|++||++|.+...
T Consensus        76 ~~~~~~g~id~lV~nag~~~~~   97 (274)
T d2pd4a1          76 SVKKDLGSLDFIVHSVAFAPKE   97 (274)
T ss_dssp             HHHHHTSCEEEEEECCCCCCGG
T ss_pred             HHHHHcCCCCeEEeeccccccc
Confidence                   589999999977543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.99  E-value=0.17  Score=40.70  Aligned_cols=50  Identities=12%  Similarity=-0.041  Sum_probs=39.3

Q ss_pred             CCCCEEEEeCCCHHHHHHHhhc--CcEEEecccccccc-------------------chHHHHHHHHcCCC
Q psy1304         104 IDIPIIIADLKNESSILIMAKK--CRVILNCVGPYTWY-------------------GEAVVKACIEAKTH  153 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~~--~dVVIN~aGPf~~~-------------------g~~VaeACieAGth  153 (184)
                      .++++++.|+.|.+.+..++++  .|+|+|+|+.....                   -..++++|.+.++.
T Consensus        67 ~~i~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~  137 (393)
T d1i24a_          67 KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE  137 (393)
T ss_dssp             CCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCcEEEEccCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccc
Confidence            5689999999999999999986  49999999743210                   14678999987744

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.68  E-value=0.12  Score=40.25  Aligned_cols=79  Identities=14%  Similarity=0.185  Sum_probs=53.4

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc--CCCCCCEEEEeCCCHHHHHHHhh---cCc
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE--NLIDIPIIIADLKNESSILIMAK---KCR  127 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~--~~~~v~~v~vDv~D~~sL~a~l~---~~d  127 (184)
                      |+||+.-|.|-   +||=-.-++..|++..    .+|.+.+|+++..++  .........+|+++.+.++.+.+   +.|
T Consensus         4 l~gK~alITGa---s~GIG~aia~~la~~G----~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id   76 (245)
T d2ag5a1           4 LDGKVIILTAA---AQGIGQAAALAFAREG----AKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLD   76 (245)
T ss_dssp             TTTCEEEESST---TSHHHHHHHHHHHHTT----CEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred             CCCCEEEEeCC---CCHHHHHHHHHHHHcC----CEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccce
Confidence            88999888772   3331112455565554    789999988754332  22557788999998887776655   589


Q ss_pred             EEEeccccccc
Q psy1304         128 VILNCVGPYTW  138 (184)
Q Consensus       128 VVIN~aGPf~~  138 (184)
                      ++||++|-...
T Consensus        77 ~lVn~ag~~~~   87 (245)
T d2ag5a1          77 VLFNVAGFVHH   87 (245)
T ss_dssp             EEEECCCCCCC
T ss_pred             eEEecccccCC
Confidence            99999986544

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=88.17  E-value=0.63  Score=33.36  Aligned_cols=59  Identities=15%  Similarity=0.162  Sum_probs=42.2

Q ss_pred             HHHHhhcCcEEEeccccccccchHHHHHHHHcCCC-Eee--CCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         119 ILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTH-HVD--ITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       119 L~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGth-YVD--ltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      ++.++++.|+|+-|..|...  ..++..|+++|.| |++  ++-+.   .+. .++-+.|+++|+.+.
T Consensus        55 ~~~l~~~~D~V~I~tp~~~h--~~~~~~al~~gk~V~~EKPla~~~---~e~-~~l~~~a~~~~~~~~  116 (164)
T d1tlta1          55 LSSLAASCDAVFVHSSTASH--FDVVSTLLNAGVHVCVDKPLAENL---RDA-ERLVELAARKKLTLM  116 (164)
T ss_dssp             HHHHHTTCSEEEECSCTTHH--HHHHHHHHHTTCEEEEESSSCSSH---HHH-HHHHHHHHHTTCCEE
T ss_pred             chhhhhhcccccccccchhc--cccccccccccceeeccccccCCH---HHH-HHHHHHHHHcCCcEE
Confidence            45566899999999855433  5899999999999 776  44333   343 456677888887653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=88.06  E-value=0.45  Score=35.54  Aligned_cols=44  Identities=16%  Similarity=0.189  Sum_probs=33.0

Q ss_pred             EeCCCHHHHHHHhh--cCcEEEeccccccccc----------------hHHHHHHHHcCCCE
Q psy1304         111 ADLKNESSILIMAK--KCRVILNCVGPYTWYG----------------EAVVKACIEAKTHH  154 (184)
Q Consensus       111 vDv~D~~sL~a~l~--~~dVVIN~aGPf~~~g----------------~~VaeACieAGthY  154 (184)
                      +|+.|.++++++++  +.|+||||++......                ..+.++|...+.++
T Consensus        36 ~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~   97 (281)
T d1vl0a_          36 LDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEI   97 (281)
T ss_dssp             CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEE
T ss_pred             ccCCCHHHHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccccccc
Confidence            48999999999998  4699999998764211                35566777777664

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.00  E-value=0.3  Score=38.32  Aligned_cols=89  Identities=8%  Similarity=-0.004  Sum_probs=59.6

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEee-----eeccc--------ccccCCCCCCEEEEe
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLL-----GARDC--------LYRENLIDIPIIIAD  112 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLA-----Grr~~--------lg~~~~~~v~~v~vD  112 (184)
                      .|-+.++|=|.-                ++.+|.+..-.  + +++-     .++..        .......+++++++|
T Consensus         6 LITG~tGfIGs~----------------lv~~Ll~~g~~--V-~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   66 (346)
T d1ek6a_           6 LVTGGAGYIGSH----------------TVLELLEAGYL--P-VVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMD   66 (346)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHTTCC--E-EEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECC
T ss_pred             EEECCCcHHHHH----------------HHHHHHHCcCE--E-EEEECCCccccccccchHHHHHHHHhcCCCcEEEEee
Confidence            357888999887                77888765544  2 2221     11110        001122678999999


Q ss_pred             CCCHHHHHHHhhcCc--EEEecccccccc---------------c-hHHHHHHHHcCCC
Q psy1304         113 LKNESSILIMAKKCR--VILNCVGPYTWY---------------G-EAVVKACIEAKTH  153 (184)
Q Consensus       113 v~D~~sL~a~l~~~d--VVIN~aGPf~~~---------------g-~~VaeACieAGth  153 (184)
                      +.|.+.|..++.+.+  +++++|+.....               | ..++++|.+.|+.
T Consensus        67 l~d~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~  125 (346)
T d1ek6a_          67 ILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK  125 (346)
T ss_dssp             TTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ccccccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcc
Confidence            999999999998866  688998743211               1 5789999999985

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.33  E-value=0.15  Score=39.19  Aligned_cols=74  Identities=12%  Similarity=0.200  Sum_probs=46.7

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCC-HHHHHHHhhcCcEEEe
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKN-ESSILIMAKKCRVILN  131 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D-~~sL~a~l~~~dVVIN  131 (184)
                      .+||+.-|.|-   .+|----++..|++..    .++.+.+|+++.-.+  ...+++.+|+.+ .+.+.+-+.+.|++||
T Consensus         2 LkgK~~lVTGa---s~GIG~aia~~l~~~G----a~V~~~~r~~~~l~~--~~~~~~~~Dv~~~~~~~~~~~g~iD~lVn   72 (234)
T d1o5ia_           2 IRDKGVLVLAA---SRGIGRAVADVLSQEG----AEVTICARNEELLKR--SGHRYVVCDLRKDLDLLFEKVKEVDILVL   72 (234)
T ss_dssp             CTTCEEEEESC---SSHHHHHHHHHHHHTT----CEEEEEESCHHHHHH--TCSEEEECCTTTCHHHHHHHSCCCSEEEE
T ss_pred             CCCCEEEEeCC---CcHHHHHHHHHHHHCC----CEEEEEECCHHHHHh--cCCcEEEcchHHHHHHHHHHhCCCcEEEe
Confidence            46777666652   1220011444555543    789999998765331  345688899975 3455666678999999


Q ss_pred             cccc
Q psy1304         132 CVGP  135 (184)
Q Consensus       132 ~aGP  135 (184)
                      +||-
T Consensus        73 nAG~   76 (234)
T d1o5ia_          73 NAGG   76 (234)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9984

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.33  E-value=0.074  Score=39.02  Aligned_cols=91  Identities=11%  Similarity=0.068  Sum_probs=60.5

Q ss_pred             cccccCccccceeeecccccCCCCCCCchhhhhh-hCCCCCceeEEeeeecccccccCC-CCCCEEEEeCCCHHHHHHHh
Q psy1304          46 RIGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKA-DAPTSNLTRLGLLGARDCLYRENL-IDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La-~~~~~~~~~iaLAGrr~~lg~~~~-~~v~~v~vDv~D~~sL~a~l  123 (184)
                      .|.+.+++.|+.                +..-|+ +..|.  .+|.+.+.++..|+.-. ...+....+.++     ..+
T Consensus         6 aIvGATGyvG~e----------------li~lL~~~~hP~--~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~-----~~~   62 (144)
T d2hjsa1           6 AVVGATGSVGEA----------------LVGLLDERDFPL--HRLHLLASAESAGQRMGFAESSLRVGDVDS-----FDF   62 (144)
T ss_dssp             EEETTTSHHHHH----------------HHHHHHHTTCCC--SCEEEEECTTTTTCEEEETTEEEECEEGGG-----CCG
T ss_pred             EEECCCCHHHHH----------------HHHHHHhcCCCc--eEEEEEeecccCCcceeeccccchhccchh-----hhh
Confidence            467889999998                777787 45677  77776655544443211 122222233322     235


Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      .++|+|+.|++  .......+....+.|+.-+|++++.
T Consensus        63 ~~~d~vf~a~p--~~~s~~~~~~~~~~g~~VID~Ss~f   98 (144)
T d2hjsa1          63 SSVGLAFFAAA--AEVSRAHAERARAAGCSVIDLSGAL   98 (144)
T ss_dssp             GGCSEEEECSC--HHHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ccceEEEecCC--cchhhhhccccccCCceEEeechhh
Confidence            78999999985  2345788888999999999999864

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=87.24  E-value=0.084  Score=39.27  Aligned_cols=96  Identities=11%  Similarity=0.035  Sum_probs=56.9

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccccCCCCCCEEEEeCCCHHHHHHHhhcCcEEEec
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRENLIDIPIIIADLKNESSILIMAKKCRVILNC  132 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~~~~~v~~v~vDv~D~~sL~a~l~~~dVVIN~  132 (184)
                      +++|++.|-|-=.-|+.    ++.+|.....   -++.+..|+.++.............+   -+++.+.+.++|+||+|
T Consensus        22 l~~~~ilviGaG~~g~~----v~~~L~~~g~---~~i~v~nRt~~ka~~l~~~~~~~~~~---~~~~~~~l~~~Divi~a   91 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKT----VAKSLVDRGV---RAVLVANRTYERAVELARDLGGEAVR---FDELVDHLARSDVVVSA   91 (159)
T ss_dssp             CTTCEEEEESCCHHHHH----HHHHHHHHCC---SEEEEECSSHHHHHHHHHHHTCEECC---GGGHHHHHHTCSEEEEC
T ss_pred             cccCeEEEECCCHHHHH----HHHHHHhcCC---cEEEEEcCcHHHHHHHHHhhhccccc---chhHHHHhccCCEEEEe
Confidence            45666666553222222    6667776432   26889988765443222222322333   35688899999999999


Q ss_pred             cc-cccccchHHHHHHHHcC-----CCEeeCC
Q psy1304         133 VG-PYTWYGEAVVKACIEAK-----THHVDIT  158 (184)
Q Consensus       133 aG-Pf~~~g~~VaeACieAG-----thYVDlt  158 (184)
                      .+ |..-.+...++..++..     .-.+|++
T Consensus        92 tss~~~ii~~~~i~~~~~~r~~~~~~~iiDla  123 (159)
T d1gpja2          92 TAAPHPVIHVDDVREALRKRDRRSPILIIDIA  123 (159)
T ss_dssp             CSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             cCCCCccccHhhhHHHHHhcccCCCeEEEeec
Confidence            97 44455666666655432     2489985

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=86.91  E-value=0.13  Score=38.24  Aligned_cols=99  Identities=12%  Similarity=0.132  Sum_probs=58.3

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc---------CCCCCCEEEEeCCCHHHHHHHh
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE---------NLIDIPIIIADLKNESSILIMA  123 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~---------~~~~v~~v~vDv~D~~sL~a~l  123 (184)
                      ++||++-|-|-=--+|+    ++.+|.+..+   -+|.++.|+.+....         ..........|..+.+.+...+
T Consensus        16 l~~k~vlIlGaGGaara----i~~al~~~g~---~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (182)
T d1vi2a1          16 IKGKTMVLLGAGGASTA----IGAQGAIEGL---KEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL   88 (182)
T ss_dssp             CTTCEEEEECCSHHHHH----HHHHHHHTTC---SEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH
T ss_pred             cCCCEEEEECCcHHHHH----HHHHHhhcCC---ceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhh
Confidence            56677666552111222    5566666643   378888886432110         0023446678999999999999


Q ss_pred             hcCcEEEeccc--cccccchHH--HHHHHHcCCCEeeCC
Q psy1304         124 KKCRVILNCVG--PYTWYGEAV--VKACIEAKTHHVDIT  158 (184)
Q Consensus       124 ~~~dVVIN~aG--Pf~~~g~~V--aeACieAGthYVDlt  158 (184)
                      ..+|+||||..  .+-...+.+  -...+..+...+|+.
T Consensus        89 ~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~  127 (182)
T d1vi2a1          89 ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV  127 (182)
T ss_dssp             HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred             cccceeccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence            99999999963  221111111  123455666677776

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.37  E-value=0.38  Score=38.73  Aligned_cols=78  Identities=14%  Similarity=0.055  Sum_probs=48.1

Q ss_pred             cccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeeccccccc-------------CCCCCCEEEEeCCCHHHH
Q psy1304          53 FRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYRE-------------NLIDIPIIIADLKNESSI  119 (184)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~~-------------~~~~v~~v~vDv~D~~sL  119 (184)
                      |+||+.-|.|-   ++|----++..|++..    .+|.+..++.+....             .........+|+.|.+++
T Consensus         5 l~gKvalITGa---s~GIG~aiA~~la~~G----a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~   77 (302)
T d1gz6a_           5 FDGRVVLVTGA---GGGLGRAYALAFAERG----ALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAG   77 (302)
T ss_dssp             CTTCEEEETTT---TSHHHHHHHHHHHHTT----CEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGH
T ss_pred             cCCCEEEEeCC---CCHHHHHHHHHHHHcC----CEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHH
Confidence            67998888772   2331112444555544    678887654321100             003456788999998877


Q ss_pred             HHHhh-------cCcEEEecccccc
Q psy1304         120 LIMAK-------KCRVILNCVGPYT  137 (184)
Q Consensus       120 ~a~l~-------~~dVVIN~aGPf~  137 (184)
                      +++++       +.|++||+||-+.
T Consensus        78 ~~~v~~~~~~~G~iDiLVnNAGi~~  102 (302)
T d1gz6a_          78 EKLVKTALDTFGRIDVVVNNAGILR  102 (302)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCC
Confidence            77665       5899999999653

>d1vjpa1 c.2.1.3 (A:0-209,A:317-381) Hypothetical protein TM1419 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1419
species: Thermotoga maritima [TaxId: 2336]

Probab=84.98  E-value=0.33  Score=39.69  Aligned_cols=56  Identities=16%  Similarity=0.222  Sum_probs=36.8

Q ss_pred             cCcEEEeccc--cccccc--------------------hHHHHHHH-----HcCCCEeeCCCChHHHHHHHHHhHHHHHH
Q psy1304         125 KCRVILNCVG--PYTWYG--------------------EAVVKACI-----EAKTHHVDITGEPYFMEYMQYEYNTRAQE  177 (184)
Q Consensus       125 ~~dVVIN~aG--Pf~~~g--------------------~~VaeACi-----eAGthYVDltGE~~~~~~ii~~lhe~Aka  177 (184)
                      +.+|||||+.  ||.-.|                    .-=+.||+     ++||.||..+=.  ++-.. ..+.+.|++
T Consensus       124 ~~~Vvvn~asTE~ylpvgs~~~~~~a~~~~~~~~i~aS~~YA~AAL~~~~~~aG~~fVN~~P~--~ia~~-Pal~ela~~  200 (275)
T d1vjpa1         124 DPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKERLTATQVYAYAAALYANKRGGAAFVNVIPT--FIAND-PAFVELAKE  200 (275)
T ss_dssp             CCSEEEECCCCCCCCCCSSHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHTCEEEEECSSS--CSTTC-HHHHHHHHH
T ss_pred             chhheeecccccccCCCCcHHHHHHHhhccCccccChHHHHHHHHHHhhhccCCceeEeccCc--cccCC-HHHHHHHHH
Confidence            4789999865  443322                    12245677     899999986542  32222 356778899


Q ss_pred             cCCeee
Q psy1304         178 SEVQKC  183 (184)
Q Consensus       178 aGV~Iv  183 (184)
                      +|++|+
T Consensus       201 ~gvPi~  206 (275)
T d1vjpa1         201 NNLVVF  206 (275)
T ss_dssp             TTEEEE
T ss_pred             cCCcEE
Confidence            999885

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.48  E-value=0.33  Score=38.12  Aligned_cols=92  Identities=13%  Similarity=0.038  Sum_probs=62.9

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEee--ee--c-------ccccccCCCCCCEEEEeCCC
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLL--GA--R-------DCLYRENLIDIPIIIADLKN  115 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLA--Gr--r-------~~lg~~~~~~v~~v~vDv~D  115 (184)
                      |-+.++|-|+-                ++.+|.+..-.  +. ++.  .+  .       .........+++++..|..|
T Consensus        21 VTG~tGfIGs~----------------lv~~L~~~g~~--V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d   81 (341)
T d1sb8a_          21 ITGVAGFIGSN----------------LLETLLKLDQK--VV-GLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN   81 (341)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTTCE--EE-EEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTS
T ss_pred             EecCCCHHHHH----------------HHHHHHHCcCE--EE-EEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccc
Confidence            46899999998                77888876544  21 121  00  0       01111122678899999999


Q ss_pred             HHHHHHHhhcCcEEEecccccccc----------------chHHHHHHHHcCCC-EeeC
Q psy1304         116 ESSILIMAKKCRVILNCVGPYTWY----------------GEAVVKACIEAKTH-HVDI  157 (184)
Q Consensus       116 ~~sL~a~l~~~dVVIN~aGPf~~~----------------g~~VaeACieAGth-YVDl  157 (184)
                      ...+.....+.+.|++++......                -..++++|.+.|+. +|-+
T Consensus        82 ~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~  140 (341)
T d1sb8a_          82 LDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYA  140 (341)
T ss_dssp             HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEE
T ss_pred             ccccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEc
Confidence            999999999999999998643211                15788999999984 5443

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.95  E-value=0.51  Score=35.46  Aligned_cols=42  Identities=12%  Similarity=-0.005  Sum_probs=34.5

Q ss_pred             HHHHHhhcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCCh
Q psy1304         118 SILIMAKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEP  161 (184)
Q Consensus       118 sL~a~l~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~  161 (184)
                      .+..+.+++|+||.|.|.|...  .-++..+++|+.+|=++++.
T Consensus        72 ~~~~~~~~vDvViEcTG~f~~~--~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          72 TLNDLLEKVDIIVDATPGGIGA--KNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             BHHHHHTTCSEEEECCSTTHHH--HHHHHHHHHTCEEEECTTSC
T ss_pred             hhhhhhccCCEEEECCCCCCCH--HHHHHHHHcCCCEEEECCCC
Confidence            3556678999999999998654  56688999999999998853

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.53  E-value=0.93  Score=34.66  Aligned_cols=87  Identities=14%  Similarity=-0.022  Sum_probs=58.0

Q ss_pred             ccccCccccceeeecccccCCCCCCCchhhhhhhCCCCCceeEEeeeecccccc-------cCCCCCCEEEEeCCCHHHH
Q psy1304          47 IGESQPFRGQTLSVQDKIRPGRGSNPRPSAYKADAPTSNLTRLGLLGARDCLYR-------ENLIDIPIIIADLKNESSI  119 (184)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~La~~~~~~~~~iaLAGrr~~lg~-------~~~~~v~~v~vDv~D~~sL  119 (184)
                      |.+.++|-|..                ++.+|.+..    -+|-...|+.....       ...+++.++.+|+.|.+.+
T Consensus         5 ItG~tGfiG~~----------------l~~~Ll~~g----~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~   64 (321)
T d1rpna_           5 VTGITGQDGAY----------------LAKLLLEKG----YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSV   64 (321)
T ss_dssp             EETTTSHHHHH----------------HHHHHHHTT----CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHH
T ss_pred             EECCCCHHHHH----------------HHHHHHHCc----CEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHh
Confidence            56778999888                778887654    23322233321110       0125678999999999999


Q ss_pred             HHHhhc--CcEEEeccccccccc----------------hHHHHHHHHcCCC
Q psy1304         120 LIMAKK--CRVILNCVGPYTWYG----------------EAVVKACIEAKTH  153 (184)
Q Consensus       120 ~a~l~~--~dVVIN~aGPf~~~g----------------~~VaeACieAGth  153 (184)
                      ..++..  .++++++++......                .+++++|.+.++.
T Consensus        65 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~  116 (321)
T d1rpna_          65 QRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE  116 (321)
T ss_dssp             HHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTT
T ss_pred             hhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCC
Confidence            988876  568888886543322                4668899988865

>d1u1ia1 c.2.1.3 (A:1-227,A:333-392) Myo-inositol 1-phosphate synthase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Myo-inositol 1-phosphate synthase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.02  E-value=0.68  Score=37.89  Aligned_cols=38  Identities=13%  Similarity=0.092  Sum_probs=27.1

Q ss_pred             HHHHHHHcCCCEeeCCCChHHHHHHHHHhHHHHHHcCCeee
Q psy1304         143 VVKACIEAKTHHVDITGEPYFMEYMQYEYNTRAQESEVQKC  183 (184)
Q Consensus       143 VaeACieAGthYVDltGE~~~~~~ii~~lhe~AkaaGV~Iv  183 (184)
                      =+.||+++||.||..+=..  .-.. -.+-+.|+++|++++
T Consensus       185 YA~AAl~aG~~fVN~tPs~--~a~~-Pal~ela~~~gvPia  222 (287)
T d1u1ia1         185 YAYAALKLGLPYANFTPSP--GSAI-PALKELAEKKGVPHA  222 (287)
T ss_dssp             HHHHHHHTTCCEEECSSSC--TTCS-HHHHHHHHTTTCEEE
T ss_pred             HHHHHHHcCCCEEeccCcc--ccCC-HHHHHHHHHcCCCEe
Confidence            4678999999999876432  1222 346678899999875

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.56  E-value=0.53  Score=36.33  Aligned_cols=34  Identities=21%  Similarity=0.131  Sum_probs=28.4

Q ss_pred             CCCCEEEEeCCCHHHHHHHhh--cCcEEEecccccc
Q psy1304         104 IDIPIIIADLKNESSILIMAK--KCRVILNCVGPYT  137 (184)
Q Consensus       104 ~~v~~v~vDv~D~~sL~a~l~--~~dVVIN~aGPf~  137 (184)
                      ..+++...|+.+.+++...++  ++|+|||+|++..
T Consensus        56 ~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~Aa~~~   91 (339)
T d1n7ha_          56 ALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSH   91 (339)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             cceEEEEccccCHHHHHHHHhhhccchhhhcccccc
Confidence            446788999999999999886  4699999998753

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.07  E-value=0.54  Score=34.26  Aligned_cols=55  Identities=13%  Similarity=0.138  Sum_probs=36.0

Q ss_pred             hcCcEEEeccccccccchHHHHHHHHcCCCEeeCCCChHHHHHHHHHhHHH-HHHcCCee
Q psy1304         124 KKCRVILNCVGPYTWYGEAVVKACIEAKTHHVDITGEPYFMEYMQYEYNTR-AQESEVQK  182 (184)
Q Consensus       124 ~~~dVVIN~aGPf~~~g~~VaeACieAGthYVDltGE~~~~~~ii~~lhe~-AkaaGV~I  182 (184)
                      .++|+||+..-|-..  ...++.|++.|++.|  .|-+.|..+-++++.+. ++++++++
T Consensus        43 ~~~DvvIDFS~p~~~--~~~~~~~~~~~~~~V--iGTTG~~~~~~~~l~~~~~~~~~ipi   98 (135)
T d1yl7a1          43 GNTEVVIDFTHPDVV--MGNLEFLIDNGIHAV--VGTTGFTAERFQQVESWLVAKPNTSV   98 (135)
T ss_dssp             TTCSEEEECCCTTTH--HHHHHHHHHTTCEEE--ECCCCCCHHHHHHHHHHHHSCTTCEE
T ss_pred             ccCCEEEEcccHHHH--HHHHHHHHhcCCCEE--EeccccchhHHHHHHHHHHhcCCCCE
Confidence            579999999877654  488999999999963  34444433222455553 33445554