Psyllid ID: psy13120

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380----
Protein Sequence
DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS
Secondary Structure (PSIPRED)
ccccEEEEEEEccccccEEEEccccEEEEccccccccccEEEEEEEEEEccccccccccEEEEEEEEEEEccccccccccccEEEEccccccccEEEEEEEEEcccccccEEEEEEEccccccEEEEcccEEEEEccccccccccEEEEEEEEEEccccccEEEEEEEEEEEEccccccEEEEEEEEEEEccccccccEEEEEEEEEcccccccEEEEEEccccccccEEEEccEEEEEEccccccccccEEEEEEEEEEccccccccccccEEEEEEEEEEccccccccccccEEEEEEcccccccccEEEEEEEEEcccccccEEEEEEEEEcccccccccccccccccEEEEccccEEEEccccccccccEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEccccccEEEEEccccEEEEEcccccccccEEEEEEEEEccccccccccccEEEEEEEEEEcccccccccccEEEEEccccccccEEEEEEEEccccccccEEEEEEEcccccEEEEEccccEEEEccccccccccEEEEEEEEEEccccEccccEEEEEEEEcccccccEEcccEEEEEEEcccccccEEEEccEEccccccccEEEEEEcccccccEEEEEccccEEEEEccccHHHcccEEEEEEEEccccccccccccEEEEEEEEEEEccccccccccccEEEEEccccccccEEEEEEEEEEcccccccccEEEEEEEcccccccEEEEccccccEEEEEccccEEEEEccccHHHcccEEEEEEEEcc
Coil and Loop (DISEMBL)
dngrleysivsgddeeiftinpsngtlsnlkhldretkSSYNLVVMAtdmakppqkrlssttQVSIVIRdvndnapefitanettipensplNTVVAALKAidrdegqnsyVEYSIinseatpfslgpvDGLLRVAQKLDREIKSNYTLEIkakdrgepskssRTKFFIRLLdendnnpifdsksysasvpeniSVGATVLQVsatdlddgingrVRYTIisgddnhdltisednGLLRIAKNLNYERKAQYSLTIqaedcggdteerirfDTATVSILVSdindnypvflhspYLALvnentlpgpsfrimtvqahdadslpfnGLVRYFLkdsgassgnsqtqggtgdlfrvnsttgdiyllKSLDREKQAEYLLTLQAMDS
Flexible Loop (DISEMBL)
DNGRLEYSivsgddeeiftinpsngtlsnlkhldRETKSSYNLVVMAtdmakppqkrlssttqvsiVIRDVNDNAPEFITanettipensplNTVVAALKAIDRDEGQNSYVEYSIINseatpfslgpVDGLLRVAQKLDReiksnytleikakdrgepskssrTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVsatdlddginGRVRYTiisgddnhdltiseDNGLLRIAKNLNYERKAQYSLTiqaedcggdTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGassgnsqtqggtgdlfrvnSTTGDIYLLKSLDREKQAEYLLTLQAMDS
Low Complexity Region (SEG)
DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDsgassgnsqtqggtgDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS
Disordered region (IsUnstruct)
*****************F************************LVV******************VSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTL*****************FFIRLLDE*****IF********VPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLK****************DLFRVNSTTGDIYLLKSLDREKQAEYLL*******
Disordered Region (DISOPRED)
DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSG*****GGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS
Disordered Region (DISEMBL)
DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDM***********TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKA**********RTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDS***********GTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS
Disordered Region (DISPRO)
*NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	384	2.2.26 [Sep-21-2011]
P33450	5147	Cadherin-related tumor su	yes	N/A	0.958	0.071	0.505	1e-110
Q2PZL6	4981	Protocadherin Fat 4 OS=Mu	yes	N/A	0.942	0.072	0.415	1e-73
Q6V0I7	4981	Protocadherin Fat 4 OS=Ho	yes	N/A	0.942	0.072	0.436	2e-73
Q14517	4588	Protocadherin Fat 1 OS=Ho	no	N/A	0.927	0.077	0.365	3e-54
Q9V5N8	3579	Protocadherin-like wing p	no	N/A	0.940	0.100	0.352	7e-51
Q8R508	4555	Protocadherin Fat 3 OS=Ra	no	N/A	0.934	0.078	0.348	3e-47
Q91ZI0	3301	Cadherin EGF LAG seven-pa	no	N/A	0.940	0.109	0.343	5e-47
Q9VW71	4705	Fat-like cadherin-related	no	N/A	0.919	0.075	0.341	8e-47
Q8BNA6	4555	Protocadherin Fat 3 OS=Mu	no	N/A	0.934	0.078	0.345	9e-47
O88278	3313	Cadherin EGF LAG seven-pa	no	N/A	0.940	0.108	0.343	1e-46

>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft PE=1 SV=3

 Score =  400 bits (1027), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/425 (50%), Positives = 281/425 (66%), Gaps = 57/425 (13%)

Query: 1    DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATD----------- 49
            +NG +EYSI +GD +  F I+ SNGT+   ++LDRE +S+Y L V A D           
Sbjct: 2058 NNGLIEYSITAGDVDSEFGID-SNGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSEL 2116

Query: 50   ----------------------MAKPPQKRLSSTTQVSIVIRDVNDNAPEFITANETTIP 87
                                  +A   Q+RLSST +V+I+I+DVND  P FI+ANET I 
Sbjct: 2117 EETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANETAIM 2176

Query: 88   ENSPLNTVVAALKAIDRDEGQNSYVEY--------SIINSEATPFSLGPVDGLLRVAQKL 139
            EN  +NTVV A+KA+D DEG+N Y++Y         +  S+  PFSL P DG LRV   L
Sbjct: 2177 ENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDAL 2236

Query: 140  DREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGAT 199
            DRE++S+Y L I A+DRGEP +S+ ++  IR+LDENDN+P+FD K YSASV EN S+GA 
Sbjct: 2237 DRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAM 2296

Query: 200  VLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAE 259
            VLQVSATD+D+G NGR+RY+I+ GD NHD +ISED G++R+AKNLNYER ++YSLT++AE
Sbjct: 2297 VLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAE 2356

Query: 260  DCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDA 319
            DC     E    DTA ++I + DINDN P FL SPYLA V ENT+P     ++TV A+DA
Sbjct: 2357 DCA---LENPAGDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDA 2413

Query: 320  DSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTL 379
            D+ P N  VRYFLK+            G  DLFR+N+++GDI LLK LDRE+Q+EY LTL
Sbjct: 2414 DTPPLNSQVRYFLKE------------GDSDLFRINASSGDIALLKPLDREQQSEYTLTL 2461

Query: 380  QAMDS 384
             AMD+
Sbjct: 2462 VAMDT 2466

Could function as a cell-adhesion protein. Acts as a tumor suppressor. Required for correct morphogenesis.
Drosophila melanogaster (taxid: 7227)

>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2

 Score =  276 bits (707), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 160/385 (41%), Positives = 227/385 (58%), Gaps = 23/385 (5%)

Query: 2    NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
            N +L YSI SGD    F ++  +G L  LK LDRE++S YNLV+   D+ +PP  R +ST
Sbjct: 1976 NSQLSYSIASGDSLGQFAVD-KHGVLKTLKALDRESQSFYNLVIQVHDLPQPPTSRFTST 2034

Query: 62   TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA 121
             QVSI++ DVNDN P F++   T IPEN+P++TVV   +A D D G NSY+EY+++N   
Sbjct: 2035 AQVSIILLDVNDNPPMFLSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPSG 2094

Query: 122  TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
              FS+G +DG + +  +LDRE  SNY+L + A D+G+P  SS T+  + +LD NDNNP+F
Sbjct: 2095 NKFSIGTIDGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVF 2154

Query: 182  DSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIA 241
                Y   + ENI  G  ++QVSA D D+G NG+VRY I+ G+ + +  I    G + +A
Sbjct: 2155 AQAMYRVQIKENILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVA 2214

Query: 242  KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301
            K+L+ E    Y+LT+QA D G       R D+ TV+I + D+ND  PVF  SPY   V E
Sbjct: 2215 KSLDRETTPAYTLTVQATDRGSSP----RTDSCTVAITLLDMNDFVPVFELSPYSVNVPE 2270

Query: 302  N--TLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTG 359
            N  TLP     I+ V A D D  P N  + Y L             GG  D   V + +G
Sbjct: 2271 NLGTLPR---AILQVVARDDDQGP-NSQLSYVLL------------GGNEDNAFVLTASG 2314

Query: 360  DIYLLKSLDREKQAEYLLTLQAMDS 384
            ++ + +SLDRE +  ++L + A D+
Sbjct: 2315 ELRVTQSLDREARDHFVLVVTAADA 2339

May function in the regulation of planar cell polarity. Cadherins are cell-cell interaction molecules.

Mus musculus (taxid: 10090)

>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2

 Score =  276 bits (706), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 168/385 (43%), Positives = 227/385 (58%), Gaps = 23/385 (5%)

Query: 2    NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
            N +L YSI SGD    FT++  NG L  LK LDRE++S YNLVV   D+ + P  R +ST
Sbjct: 1976 NSQLTYSIASGDSLGQFTVD-KNGVLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTST 2034

Query: 62   TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA 121
             QVSI++ DVNDN P F++   T IPEN+P++TVV   +A D D G NSY+EY+++N   
Sbjct: 2035 AQVSIILLDVNDNPPTFLSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLG 2094

Query: 122  TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
              FS+G +DG +R+  +LDRE  SNYTL + A D+G+PS SS T+  + +LD NDNNPIF
Sbjct: 2095 NKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIF 2154

Query: 182  DSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIA 241
                Y   + EN   G  ++QV A D D+G NG+VRY I++G+ N +  I    G + +A
Sbjct: 2155 AQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVA 2214

Query: 242  KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301
            K L+ E+   Y LT+QA D G       R DT+TVSI++ DIND  PVF  SPY   V E
Sbjct: 2215 KPLDREKTPTYHLTVQATDRGSTP----RTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270

Query: 302  N--TLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTG 359
            N  TLP     I+ V A D D    N  + Y L             GG  D     S +G
Sbjct: 2271 NLGTLPR---TILQVVARD-DDRGSNSKLSYVLF------------GGNEDNAFTLSASG 2314

Query: 360  DIYLLKSLDREKQAEYLLTLQAMDS 384
            ++ + +SLDRE +  ++L + A DS
Sbjct: 2315 ELGVTQSLDRETKERFVLMITATDS 2339

May function in the regulation of planar cell polarity (By similarity). Cadherins are cell-cell interaction molecules.

Homo sapiens (taxid: 9606)

>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2

 Score =  212 bits (540), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/386 (36%), Positives = 213/386 (55%), Gaps = 30/386 (7%)

Query: 2    NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
            N  + Y+++ G   E F +NP  G L     LDRE ++ Y+L+V ATD            
Sbjct: 3055 NAEITYTLL-GSGAEKFKLNPDTGELKTSTPLDREEQAVYHLLVRATDGG-------GRF 3106

Query: 62   TQVSIVI--RDVNDNAPEFIT-ANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIIN 118
             Q SIV+   DVNDNAPEF       T+ EN+   T++  ++A D D G N  + YS+I+
Sbjct: 3107 CQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAGLNRKILYSLID 3166

Query: 119  SEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRT-KFFIRLLDENDN 177
            S    FS+  + G++++ + LDRE+++ YTL +KA D+G P + + T    + +LD NDN
Sbjct: 3167 SADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTATGTVIVSVLDINDN 3226

Query: 178  NPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGL 237
             P+F+ + Y A+V E+I VG  VLQV A   D   N  + Y+IISG+++   +I    G 
Sbjct: 3227 PPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGA 3286

Query: 238  LRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLA 297
            + I +NL+YE   +Y LT++A D G  +      D ATV++ V+DINDN PVF    Y  
Sbjct: 3287 VFIIENLDYESSHEYYLTVEATDGGTPSLS----DVATVNVNVTDINDNTPVFSQDTYTT 3342

Query: 298  LVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNST 357
            +++E+ +   S  ++TV A DAD  P N  + Y + D           G  G  F ++  
Sbjct: 3343 VISEDAVLEQS--VITVMADDADG-PSNSHIHYSIID-----------GNQGSSFTIDPV 3388

Query: 358  TGDIYLLKSLDREKQAEYLLTLQAMD 383
             G++ + K LDRE  + Y LT+QA D
Sbjct: 3389 RGEVKVTKLLDRETISGYTLTVQASD 3414

Plays an essential role for cellular polarization, directed cell migration and modulating cell-cell contact.

Homo sapiens (taxid: 9606)

>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila melanogaster GN=stan PE=1 SV=4

 Score =  201 bits (511), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 137/389 (35%), Positives = 217/389 (55%), Gaps = 28/389 (7%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
           +N  + Y+I+ G+ +  F+I+  +G +S +K LD E+  SY LV+ A D   P +   S+
Sbjct: 615 NNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR---SN 671

Query: 61  TTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS 119
           TTQ+ + + D NDNAP F T+  + ++ EN P+   +  ++A D DEG N+ + YSI   
Sbjct: 672 TTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISER 731

Query: 120 EAT-PFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNN 178
           +   P ++ P  G ++  + LDRE +  +  ++ AKD G P KS+ +   I + D NDN+
Sbjct: 732 DDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND 791

Query: 179 PIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDN--G 236
           P F+ K Y A+V E+   G  V  V+ATD D+  + R+ Y I +G+      I+  N  G
Sbjct: 792 PAFNPKYYEANVGEDQPPGTPVTTVTATDPDE--DSRLHYEITTGNTRGRFAITSQNGRG 849

Query: 237 LLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYL 296
           L+ IA++L+Y+++ ++ LT+ A D GG      R DTATV I ++D N+  P+F ++PY 
Sbjct: 850 LITIAQSLDYKQEKRFLLTVAATDSGG------RSDTATVHINITDANNFAPIFENAPYS 903

Query: 297 ALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTG--DLFRV 354
           A V E+   G +  ++ V A D+D +  N  + Y L        N ++  G G  D F +
Sbjct: 904 ASVFEDAPVGTT--VLVVSATDSD-VGVNAQITYSL--------NEESINGLGSPDPFSI 952

Query: 355 NSTTGDIYLLKSLDREKQAEYLLTLQAMD 383
           N  TG I     LDRE  + YLLT+ A D
Sbjct: 953 NPQTGAIVTNAPLDRETTSGYLLTVTAKD 981

Involved in the fz signaling pathway that controls wing tissue polarity. Also mediates homophilic cell adhesion. May play a role in initiating prehair morphogenesis. May play a critical role in tissue polarity and in formation of normal dendrite fields.

Drosophila melanogaster (taxid: 7227)

>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1

 Score =  189 bits (481), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/385 (34%), Positives = 208/385 (54%), Gaps = 26/385 (6%)

Query: 2    NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
            NG + YS+    + + F ++P +G L  L  LDRE    YNL+  ATD       R  S+
Sbjct: 3060 NGDIRYSLYGSGNSDFF-LDPESGELKTLALLDRERVPVYNLIARATDGGG----RFCSS 3114

Query: 62   TQVSIVIRDVNDNAPEFITANET-TIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE 120
            T V +++ DVNDN P F + + T  + EN+    ++  ++A+D D G N  V YS+ +S 
Sbjct: 3115 T-VLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAVDPDVGINRKVVYSLEDSA 3173

Query: 121  ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE-PSKSSRTKFFIRLLDENDNNP 179
            +  FS+    G++ + Q LDRE +S+Y + ++A D+    S SS T   I +LD NDN P
Sbjct: 3174 SGVFSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQSLSSLTSVTITVLDINDNPP 3233

Query: 180  IFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLR 239
            +F+ + Y  +VPE+ S+G  VL V AT  D G N  + Y I SG++     I+   G + 
Sbjct: 3234 VFERRDYLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFRINPKTGGIS 3293

Query: 240  IAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALV 299
            + + L+YE   ++ L ++A+D G           ATVSI ++D+NDN P F    Y A++
Sbjct: 3294 VLEALDYEMCKRFYLVVEAKDGGTPALST----AATVSIDLTDVNDNPPRFSQDVYSAVI 3349

Query: 300  NENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTG 359
            +E+ L G S  ++ + A D DS P NG +R+           S   G   + F V+   G
Sbjct: 3350 SEDALEGDS--VILLIAEDVDSKP-NGQIRF-----------SIVGGDRDNEFAVDPILG 3395

Query: 360  DIYLLKSLDREKQAEYLLTLQAMDS 384
             + + K LDRE+ + Y L +QA+DS
Sbjct: 3396 LVKVKKKLDRERVSGYSLLIQAVDS 3420

May play a role in the interactions between neurites derived from specific subsets of neurons during development.

Rattus norvegicus (taxid: 10116)

>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus GN=Celsr3 PE=2 SV=2

 Score =  188 bits (478), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 135/393 (34%), Positives = 202/393 (51%), Gaps = 32/393 (8%)

Query: 3   GRLEYSI---VSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLS 59
           GRL YS+   ++    E+F+I+P +G +     LDRE+   + L V A D   P   RLS
Sbjct: 349 GRLIYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRVTAQDHGSP---RLS 405

Query: 60  STTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIIN 118
           +TT V++ + D ND+AP F  A    T+ EN      +  L+A D D   N+ + Y  + 
Sbjct: 406 ATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVG 465

Query: 119 SEAT------PFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRG-EPS-KSSRTKFFIR 170
           S A        F + P  GL+  + ++DRE   +Y L ++A D+G EP  +S+  +  I 
Sbjct: 466 SPAVRTAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHIT 525

Query: 171 LLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLT 230
           +LDENDN P F  K Y A V E++     VL+V+ATD D   NG V Y IISG+      
Sbjct: 526 VLDENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFA 585

Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I    G +++   L++E + +Y+L I+A+D G      +  +T   SI V DIND+ P+F
Sbjct: 586 IDSLTGEIQVMAPLDFEAEREYALRIRAQDAG---RPPLSNNTGLASIQVVDINDHAPIF 642

Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGD 350
           + +P+   V EN   G S  ++ +QA DAD    N  + Y L  +G +S           
Sbjct: 643 VSTPFQVSVLENAPLGHS--VIHIQAVDADHGE-NSRLEYSL--TGVASDTP-------- 689

Query: 351 LFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMD 383
            F +NS TG + +   LDRE    Y   ++A D
Sbjct: 690 -FVINSATGWVSVSGPLDRESVEHYFFGVEARD 721

Receptor that may have an important role in cell/cell signaling during nervous system formation.

Mus musculus (taxid: 10090)

>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila melanogaster GN=kug PE=2 SV=2

 Score =  187 bits (476), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 128/375 (34%), Positives = 190/375 (50%), Gaps = 22/375 (5%)

Query: 10   VSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIR 69
            +SG   + F+I   +G L     LDRET   Y LV    D     Q+  S   ++ I + 
Sbjct: 3120 LSGKGADDFSIGKESGILKVASALDRETTPKYKLVAHVQDGKDFTQECFS---EIIITVN 3176

Query: 70   DVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGP 128
            D+NDN P F  A    ++PE++ LNT++  + A+D+D G N  ++YS++      F +  
Sbjct: 3177 DINDNMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYFKISK 3236

Query: 129  VDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSA 188
              G++R+ + LDRE  S + L +KA+D G P   S     + +LD NDN P F  + YS 
Sbjct: 3237 STGIIRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSC 3296

Query: 189  SVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYER 248
             + EN + G  V +V AT +D G+N  + Y I+SG++     +    G L +   L+YE 
Sbjct: 3297 KILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLDYEM 3356

Query: 249  KAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPS 308
               Y LTIQA D G         + A V+I + DINDN P FL + Y   VNE+   G  
Sbjct: 3357 SKFYFLTIQAIDGGTPPLS----NNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGS- 3411

Query: 309  FRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLD 368
             +I+ V+A D DS   NGLV Y ++           +G     F ++   G I + + LD
Sbjct: 3412 -KILDVKATDEDS-DVNGLVTYNIE-----------RGDNIGQFSIDPKNGTISVSRPLD 3458

Query: 369  REKQAEYLLTLQAMD 383
            RE  + Y L +QA D
Sbjct: 3459 RETISHYTLEIQACD 3473

Required for the planar polarity of actin filament orientation at the basal side of ovarian follicle cells. Required for proper egg chamber shape; elongation of the egg chamber during oogenesis.

Drosophila melanogaster (taxid: 7227)

>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2

 Score =  187 bits (476), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 133/385 (34%), Positives = 208/385 (54%), Gaps = 26/385 (6%)

Query: 2    NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
            NG + YS+    + E F ++P +G L  L  LDRE    YNL+  ATD       R  S+
Sbjct: 3060 NGDIRYSLYGSGNNEFF-LDPESGELKTLAVLDRERVPVYNLIARATDGGG----RFCSS 3114

Query: 62   TQVSIVIRDVNDNAPEFITANET-TIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE 120
            + V +++ DVNDN P F + + T  + EN+    ++  ++A+D D G N  V YS+ +S 
Sbjct: 3115 S-VLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDPDVGINRKVVYSLEDSA 3173

Query: 121  ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE-PSKSSRTKFFIRLLDENDNNP 179
            +  FS+    G++ + Q LDRE +S+Y + ++A D+    S SS     I +LD NDN P
Sbjct: 3174 SGVFSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQSLSSLASVTITVLDINDNPP 3233

Query: 180  IFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLR 239
            +F+ + Y  +VPE+ S+G  VL V AT  D G N  + Y I SG++    +I+   G + 
Sbjct: 3234 VFERRDYLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFSINPKTGGIS 3293

Query: 240  IAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALV 299
            + + L+YE   ++ L ++A+D G           ATVSI ++D+NDN P F    Y A++
Sbjct: 3294 VLEALDYETCRRFYLVVEAKDGGTPALST----AATVSIDLTDVNDNPPRFSQDVYSAVI 3349

Query: 300  NENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTG 359
            +E+ L G S  ++ + A D DS P NG +R+           S   G   + F V+   G
Sbjct: 3350 SEDALEGDS--VILLIAEDVDSKP-NGQIRF-----------SIVGGDRDNEFAVDPILG 3395

Query: 360  DIYLLKSLDREKQAEYLLTLQAMDS 384
             + + K LDRE+ + Y L +QA+DS
Sbjct: 3396 LVKVKKKLDRERVSGYSLLIQAVDS 3420

May play a role in the interactions between neurites derived from specific subsets of neurons during development.

Mus musculus (taxid: 10090)

>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus GN=Celsr3 PE=2 SV=1

 Score =  187 bits (475), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 135/393 (34%), Positives = 202/393 (51%), Gaps = 32/393 (8%)

Query: 3   GRLEYSI---VSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLS 59
           GRL YS+   ++    E+F+I+P +G +     LDRE+   + L V A D   P   RLS
Sbjct: 349 GRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRVTAQDHGSP---RLS 405

Query: 60  STTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIIN 118
           +TT V++ + D ND+AP F  A    T+ EN      +  L+A D D   N+ + Y  + 
Sbjct: 406 ATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVG 465

Query: 119 S------EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRG-EPS-KSSRTKFFIR 170
           S       A  F + P  GL+  + ++DRE   +Y L ++A D+G EP  +S+  +  I 
Sbjct: 466 SPAARTAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHIT 525

Query: 171 LLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLT 230
           +LDENDN P F  K Y A V E++     VL+V+ATD D   NG V Y IISG+      
Sbjct: 526 VLDENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFA 585

Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I    G +++   L++E + +Y+L I+A+D G      +  +T   SI V DIND+ P+F
Sbjct: 586 IDSLTGEIQVMAPLDFEAEREYALRIRAQDAG---RPPLSNNTGLASIQVVDINDHSPIF 642

Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGD 350
           + +P+   V EN   G S  ++ +QA DAD    N  + Y L  +G +S           
Sbjct: 643 VSTPFQVSVLENAPLGHS--VIHIQAVDADHGE-NSRLEYSL--TGVASDTP-------- 689

Query: 351 LFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMD 383
            F +NS TG + +   LDRE    Y   ++A D
Sbjct: 690 -FVINSATGWVSVSGPLDRESVEHYFFGVEARD 721

Receptor that may have an important role in cell/cell signaling during nervous system formation.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
170032325	644	conserved hypothetical protein [Culex qu	0.963	0.574	0.594	1e-128
242014336	5078	protocadherin-16 precursor, putative [Pe	0.960	0.072	0.587	1e-126
270006423	3284	cadherin-like protein [Tribolium castane	0.966	0.112	0.583	1e-125
189236209	4974	PREDICTED: similar to AGAP007924-PA [Tri	0.966	0.074	0.583	1e-125
321458298	5030	hypothetical protein DAPPUDRAFT_329129 [	0.945	0.072	0.588	1e-122
357614377	3180	cadherin-like protein [Danaus plexippus]	0.955	0.115	0.576	1e-120
158297299	5159	AGAP007924-PA [Anopheles gambiae str. PE	0.963	0.071	0.532	1e-120
340708971	5085	PREDICTED: cadherin-related tumor suppre	0.963	0.072	0.572	1e-118
350418958	4964	PREDICTED: LOW QUALITY PROTEIN: cadherin	0.963	0.074	0.570	1e-117
312374399	3475	hypothetical protein AND_15952 [Anophele	0.963	0.106	0.505	1e-117

>gi|170032325|ref|XP_001844032.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167872318|gb|EDS35701.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/385 (59%), Positives = 298/385 (77%), Gaps = 15/385 (3%)

Query: 2   NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
           NGR+EYSI SGDD E F I  SNGT+   + LDRE+KSSY+L+V A D AK P+K+LSST
Sbjct: 256 NGRIEYSITSGDDNEDFQI-LSNGTIRTRRALDRESKSSYSLIVSARDCAKEPEKQLSST 314

Query: 62  TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA 121
            QV+IV++DVND APEF+T NET++ EN P+NTV+ A+KA+DRDEG+N YVEY +  +  
Sbjct: 315 VQVTIVLKDVNDLAPEFVTPNETSVAENIPINTVIMAIKAVDRDEGRNGYVEYQLDPAVQ 374

Query: 122 TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
           TPF++G  DGLLRV+ +LDRE KS+Y L + AKDRGEP KSS++K  I +LDENDN+PIF
Sbjct: 375 TPFTVGSADGLLRVSGRLDRETKSSYELTVTAKDRGEPPKSSQSKIRIHVLDENDNSPIF 434

Query: 182 DSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIA 241
           D K YSA++ EN S+GA+VLQVSATD+D+G NGRVR++I +GDDN D TISED+G++R+A
Sbjct: 435 DPKQYSAAIAENASIGASVLQVSATDIDEGANGRVRFSIAAGDDNRDFTISEDSGVVRVA 494

Query: 242 KNLNYERKAQYSLTIQAEDCGGDTE--ERIRFDTATVSILVSDINDNYPVFLHSPYLALV 299
           KNLNYERK+ Y++T++AED   DTE    +RFDTA +SI ++DINDN P FL SPYLA V
Sbjct: 495 KNLNYERKSHYTVTVRAEDSASDTENGSEVRFDTARLSITITDINDNPPTFLDSPYLAYV 554

Query: 300 NENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTG 359
            EN +P     ++TV+A+DAD+ PFN  VRYFLK+            G  D F++N++TG
Sbjct: 555 MENVIPPNGGYVITVRAYDADTPPFNSQVRYFLKE------------GDTDFFKINASTG 602

Query: 360 DIYLLKSLDREKQAEYLLTLQAMDS 384
           +I LL++LDRE QAEY+LTL AMD+
Sbjct: 603 EISLLRALDREMQAEYILTLVAMDT 627

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242014336|ref|XP_002427847.1| protocadherin-16 precursor, putative [Pediculus humanus corporis] gi|212512316|gb|EEB15109.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/383 (58%), Positives = 298/383 (77%), Gaps = 14/383 (3%)

Query: 2    NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
            NG +EY I+SGD+ E   I  +NGT+  +K LDRETKS+YNLVV  TD+A+PPQ+RLSST
Sbjct: 2003 NGAIEYKIISGDENEDLAI-ANNGTIYTVKELDRETKSAYNLVVTGTDLAEPPQQRLSST 2061

Query: 62   TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA 121
             QV+IV++DVND +PEFIT  +T++ EN PLNTVV A+KAID+DEG+NSY+EYS+ +   
Sbjct: 2062 VQVTIVLKDVNDMSPEFITPTKTSVSENIPLNTVVLAIKAIDKDEGRNSYLEYSLYDPTK 2121

Query: 122  TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
            T FS+G +DGLLRV  KLDRE  +NY+LE+ AKD+G+P + ++   F+ ++DENDN+P+F
Sbjct: 2122 T-FSVGTIDGLLRVVGKLDRETVANYSLEVVAKDKGDPPRYTKQNIFVNVVDENDNSPMF 2180

Query: 182  DSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIA 241
            D K YSAS+ EN S+GA+VLQVSATD+D+G+NG+VRY+I SGD+N D +ISED G++R+A
Sbjct: 2181 DPKHYSASIAENASIGASVLQVSATDVDEGLNGKVRYSIFSGDENRDFSISEDTGVVRVA 2240

Query: 242  KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301
            KNLN+ERK +Y LT++AED   + ++ IR+DTAT+SI+V DINDN PVFL SPY A V E
Sbjct: 2241 KNLNFERKPRYLLTVRAEDSSNNDDDNIRYDTATMSIIVRDINDNPPVFLDSPYYAYVME 2300

Query: 302  NTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDI 361
            NT+P P    +TV+A DADS  +NG VRYFLK+            G   LFR+N++TGD+
Sbjct: 2301 NTVPSPDGYFLTVRASDADSPQYNGQVRYFLKE------------GDAGLFRINASTGDL 2348

Query: 362  YLLKSLDREKQAEYLLTLQAMDS 384
            YL + LDREKQ+EYLLTL AMD+
Sbjct: 2349 YLSRPLDREKQSEYLLTLVAMDT 2371

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270006423|gb|EFA02871.1| cadherin-like protein [Tribolium castaneum]

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/387 (58%), Positives = 295/387 (76%), Gaps = 16/387 (4%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
           DNG++ + I +GD+   F + P NGT+   K LDRE +  YNLVV ATD AKPP +RLSS
Sbjct: 279 DNGKIVFRITAGDENGDFEMTP-NGTVITKKELDRERQGLYNLVVTATDQAKPPDQRLSS 337

Query: 61  TTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE 120
           T QV+I+++DVND +PEF+T NET++ EN  +NTVV A+KAID+DEG+N Y+EYS+    
Sbjct: 338 TVQVTIILKDVNDMSPEFVTPNETSVAENIAINTVVMAVKAIDKDEGRNGYIEYSLSPDS 397

Query: 121 ATP--FSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNN 178
           A+   FSLGPVDGLLRV+ ++DRE KSNYTL I A+DRG+P +++ TK F+R+LDENDN+
Sbjct: 398 ASSGTFSLGPVDGLLRVSGRIDRETKSNYTLSITARDRGDPPRATHTKIFVRILDENDNS 457

Query: 179 PIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLL 238
           P+FD K YSAS+ EN S+GA+VLQVSATD+DDG+NGRVRY+I SGD N D +I+ED G++
Sbjct: 458 PVFDPKQYSASIAENASIGASVLQVSATDVDDGLNGRVRYSINSGDTNRDFSIAEDTGVV 517

Query: 239 RIAKNLNYERKAQYSLTIQAEDCGGDT-EERIRFDTATVSILVSDINDNYPVFLHSPYLA 297
           R+AKNLNYERK++Y LT++AEDC GD   E +R DTA + I VSDINDN P FL SPYLA
Sbjct: 518 RVAKNLNYERKSRYVLTVRAEDCAGDVGGEVVRADTAEIVISVSDINDNPPTFLDSPYLA 577

Query: 298 LVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNST 357
            V ENT+P     ++TVQA+DAD+ P N LVRYF+K+            G  D F++N++
Sbjct: 578 YVMENTIPPNGGYVITVQAYDADTPPLNSLVRYFIKE------------GKPDTFKINAS 625

Query: 358 TGDIYLLKSLDREKQAEYLLTLQAMDS 384
           TG+I LL++LDRE QAEY L+L AMD+
Sbjct: 626 TGEISLLRALDREAQAEYTLSLGAMDT 652

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189236209|ref|XP_971084.2| PREDICTED: similar to AGAP007924-PA [Tribolium castaneum]

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/387 (58%), Positives = 295/387 (76%), Gaps = 16/387 (4%)

Query: 1    DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
            DNG++ + I +GD+   F + P NGT+   K LDRE +  YNLVV ATD AKPP +RLSS
Sbjct: 1969 DNGKIVFRITAGDENGDFEMTP-NGTVITKKELDRERQGLYNLVVTATDQAKPPDQRLSS 2027

Query: 61   TTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE 120
            T QV+I+++DVND +PEF+T NET++ EN  +NTVV A+KAID+DEG+N Y+EYS+    
Sbjct: 2028 TVQVTIILKDVNDMSPEFVTPNETSVAENIAINTVVMAVKAIDKDEGRNGYIEYSLSPDS 2087

Query: 121  ATP--FSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNN 178
            A+   FSLGPVDGLLRV+ ++DRE KSNYTL I A+DRG+P +++ TK F+R+LDENDN+
Sbjct: 2088 ASSGTFSLGPVDGLLRVSGRIDRETKSNYTLSITARDRGDPPRATHTKIFVRILDENDNS 2147

Query: 179  PIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLL 238
            P+FD K YSAS+ EN S+GA+VLQVSATD+DDG+NGRVRY+I SGD N D +I+ED G++
Sbjct: 2148 PVFDPKQYSASIAENASIGASVLQVSATDVDDGLNGRVRYSINSGDTNRDFSIAEDTGVV 2207

Query: 239  RIAKNLNYERKAQYSLTIQAEDCGGDT-EERIRFDTATVSILVSDINDNYPVFLHSPYLA 297
            R+AKNLNYERK++Y LT++AEDC GD   E +R DTA + I VSDINDN P FL SPYLA
Sbjct: 2208 RVAKNLNYERKSRYVLTVRAEDCAGDVGGEVVRADTAEIVISVSDINDNPPTFLDSPYLA 2267

Query: 298  LVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNST 357
             V ENT+P     ++TVQA+DAD+ P N LVRYF+K+            G  D F++N++
Sbjct: 2268 YVMENTIPPNGGYVITVQAYDADTPPLNSLVRYFIKE------------GKPDTFKINAS 2315

Query: 358  TGDIYLLKSLDREKQAEYLLTLQAMDS 384
            TG+I LL++LDRE QAEY L+L AMD+
Sbjct: 2316 TGEISLLRALDREAQAEYTLSLGAMDT 2342

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321458298|gb|EFX69368.1| hypothetical protein DAPPUDRAFT_329129 [Daphnia pulex]

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/386 (58%), Positives = 288/386 (74%), Gaps = 23/386 (5%)

Query: 1    DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
            DNG+L YSI+ G++ E F I   NGT+   + LDRET+S YNLV+MATD AKPP+KRLSS
Sbjct: 2012 DNGKLVYSIIGGNENEQFRIT-QNGTIMTSQSLDRETQSLYNLVIMATDQAKPPEKRLSS 2070

Query: 61   TTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE 120
            T QV+I+++DVND APEF+++NET + EN P+NTVV A+KAIDRDEG+NSY+EYS+   +
Sbjct: 2071 TVQVTIILKDVNDMAPEFVSSNETAVMENIPINTVVMAIKAIDRDEGRNSYIEYSLAPID 2130

Query: 121  ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPI 180
               F+LGPVDGLLRV+  LDRE ++NYTL + A DRG PS+S      +R+LDENDN+P+
Sbjct: 2131 DGCFTLGPVDGLLRVSALLDRESRANYTLHVMAYDRGLPSRSQSLDVLVRVLDENDNSPL 2190

Query: 181  FDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRI 240
            FD K YSASV EN ++G +VLQVSATDLD+G+NGRVRYTI+ GD N D  I ED+G++R+
Sbjct: 2191 FDPKVYSASVSENATIGLSVLQVSATDLDEGLNGRVRYTIVGGDINFDFHIGEDSGIIRV 2250

Query: 241  AKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVN 300
            AKNLN+ER++QY LTIQ ED G D    +R+DTAT +I + DINDN P+FL SPY+A V 
Sbjct: 2251 AKNLNFERRSQYVLTIQVEDSGND----VRYDTATATITIMDINDNAPIFLDSPYIAYVM 2306

Query: 301  E--NTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
            E  N LP P   I+TVQAHDADS P+N  VRY +KD            G   LFRVN TT
Sbjct: 2307 EENNRLPVP---IITVQAHDADSPPYN-RVRYLIKD------------GDKGLFRVNGTT 2350

Query: 359  GDIYLLKSLDREKQAEYLLTLQAMDS 384
            G+I +L+SLDRE Q+ Y + + AMDS
Sbjct: 2351 GEISVLRSLDRETQSRYEIIVVAMDS 2376

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357614377|gb|EHJ69044.1| cadherin-like protein [Danaus plexippus]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/385 (57%), Positives = 286/385 (74%), Gaps = 18/385 (4%)

Query: 2   NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
           NG+L YSI SGDD + F I+ SNGT+     LDRET   YNLV+ A D+AKPP+ RLS+T
Sbjct: 159 NGKLTYSIFSGDDNQDFKIS-SNGTIFTSSLLDRETIPIYNLVITAKDLAKPPEPRLSAT 217

Query: 62  TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA 121
            QV+I+++DVND APEFI+   T I EN PLNTV+  +KA+D+DEG+N YVEY +     
Sbjct: 218 VQVTILLKDVNDMAPEFISPKTTAISENIPLNTVIMTVKAVDKDEGRNGYVEYFMAPDPE 277

Query: 122 TP--FSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNP 179
               F+LG VDG+LR   KLDRE+KSN+T+ + AKDRG+P   ++ K FI++LDENDN+P
Sbjct: 278 VDGYFTLGNVDGILRATGKLDRELKSNFTILLTAKDRGDPPNVTKGKIFIKILDENDNSP 337

Query: 180 IFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLR 239
           +FD K YSASVPEN S+GA+VLQVSATD+D+GINGRVRY+I SGD+N D +ISED G++R
Sbjct: 338 VFDPKQYSASVPENASIGASVLQVSATDVDEGINGRVRYSIASGDENRDFSISEDTGIVR 397

Query: 240 IAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALV 299
           +AKNLN+ERK++Y L+I+AEDCG D    IRFDTA +SI + DINDN P FL +PYLA V
Sbjct: 398 VAKNLNFERKSRYILSIKAEDCGKDD---IRFDTAELSISIQDINDNPPTFLDTPYLAYV 454

Query: 300 NENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTG 359
            EN +P     I+TVQA+DADS PFN  VRYF+K+            G  DLF++N+++G
Sbjct: 455 MENVIPPYGGYILTVQAYDADSPPFNNQVRYFIKE------------GDSDLFKINASSG 502

Query: 360 DIYLLKSLDREKQAEYLLTLQAMDS 384
            I LL++LDRE Q EY L+L AMD+
Sbjct: 503 QISLLRTLDREAQDEYTLSLVAMDT 527

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158297299|ref|XP_317558.4| AGAP007924-PA [Anopheles gambiae str. PEST] gi|157015128|gb|EAA12848.4| AGAP007924-PA [Anopheles gambiae str. PEST]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/421 (53%), Positives = 299/421 (71%), Gaps = 51/421 (12%)

Query: 2    NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
            NGR+EYSI +GDD E F I  SNGT+   + LDRETKSSY+LVV A D AK P+KRLSST
Sbjct: 1993 NGRIEYSITAGDDNEDFQIM-SNGTIRTRRALDRETKSSYSLVVTARDCAKEPEKRLSST 2051

Query: 62   ----------------------------------TQVSIVIRDVNDNAPEFITANETTIP 87
                                              TQV+IV++D+ND APEF+T NET++ 
Sbjct: 2052 VQVAAADCCKILHTFTLSCSSYHHHSTYLSHATHTQVTIVLKDINDLAPEFVTPNETSVA 2111

Query: 88   ENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEAT---PFSLGPVDGLLRVAQKLDREIK 144
            EN P NTV+ A+KA+DRDEG+N YVEY + + + +   PF++G  DGLLRV+ +LDRE K
Sbjct: 2112 ENIPPNTVIMAIKAVDRDEGRNGYVEYQLEDDQGSLPSPFTVGQADGLLRVSGQLDREAK 2171

Query: 145  SNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVS 204
             +Y L + AKDRG+P + ++++  I +LDENDN+PIFD K YSA++ EN S+GA+VLQVS
Sbjct: 2172 PSYELNVIAKDRGDPPRMTQSRIRINVLDENDNSPIFDPKQYSAAIAENASIGASVLQVS 2231

Query: 205  ATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGD 264
            ATD+D+G NGRVR++I +GDDN D TISED+G++R+AKNLN+ERK+ Y++T++AEDC GD
Sbjct: 2232 ATDIDEGANGRVRFSIAAGDDNRDFTISEDSGVVRVAKNLNFERKSLYAITVRAEDCAGD 2291

Query: 265  TEE-RIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLP 323
            TE   +RFDTA +SI ++DINDN P FL SPYLA V EN +P  +  ++TV+A+DAD+ P
Sbjct: 2292 TENGEVRFDTARLSITITDINDNPPTFLDSPYLAYVMENVIPPNNGYVITVRAYDADTPP 2351

Query: 324  FNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMD 383
            FN  VRYFLK+            G  D F++N++TG+I LL++LDRE Q EY+LTL AMD
Sbjct: 2352 FNSQVRYFLKE------------GDTDFFKINASTGEISLLRALDREMQEEYILTLVAMD 2399

Query: 384  S 384
            +
Sbjct: 2400 T 2400

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340708971|ref|XP_003393090.1| PREDICTED: cadherin-related tumor suppressor-like [Bombus terrestris]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/384 (57%), Positives = 281/384 (73%), Gaps = 14/384 (3%)

Query: 1    DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
            DNGR+ Y++  GD+   F + P NGTL   K LDRE K  YNL++ ATD   PP   LSS
Sbjct: 2062 DNGRVIYAVAGGDENGDFGVAP-NGTLFTRKLLDREQKPLYNLILSATDSPLPPALPLSS 2120

Query: 61   TTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE 120
            T QV++V+ DVND +PEFI+  + +I EN+P NTVV A+KA+DRDEG+N YVEYS+ ++ 
Sbjct: 2121 TVQVTVVLLDVNDMSPEFISPTKISIIENAPSNTVVMAIKAVDRDEGRNGYVEYSLEDT- 2179

Query: 121  ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPI 180
              PF++GPVDGLLRV+  LDRE++SNYTLE+ AKDRGEP +SS T   + +LDENDN+P+
Sbjct: 2180 TLPFTVGPVDGLLRVSGSLDRELRSNYTLEVTAKDRGEPPRSSSTAVTVTVLDENDNSPV 2239

Query: 181  FDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRI 240
            FD + YSA+V EN S+GA+VLQVSA D D+G NGRVRY+I  GDDN D TISED G++R+
Sbjct: 2240 FDPRQYSATVAENASIGASVLQVSAMDRDEGANGRVRYSIAMGDDNRDFTISEDGGVIRV 2299

Query: 241  AKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVN 300
            AKNLN+ERK++Y LTI+ EDC  +  E  R DTA V+I V DINDN PVFL SPYLA V 
Sbjct: 2300 AKNLNFERKSRYYLTIRGEDCASEVGETPRGDTAQVTITVIDINDNAPVFLDSPYLAHVM 2359

Query: 301  ENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGD 360
            EN +P     ++ V+A+DAD+ P+N  VRYFLK+            G  DLFR+N++TGD
Sbjct: 2360 ENMVPPGGGFVIQVKAYDADTPPYNDQVRYFLKE------------GDTDLFRINASTGD 2407

Query: 361  IYLLKSLDREKQAEYLLTLQAMDS 384
            I+LL+ LDRE  AEY LTL AMD+
Sbjct: 2408 IFLLRPLDRELVAEYTLTLVAMDT 2431

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350418958|ref|XP_003492024.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor suppressor-like [Bombus impatiens]

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/384 (57%), Positives = 279/384 (72%), Gaps = 14/384 (3%)

Query: 1    DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
            DNGR+ Y++  GD+   F + P NGTL   K LDRE K  YNL++ ATD   PP   LS 
Sbjct: 1979 DNGRVIYAVAGGDENGDFGVAP-NGTLFTRKLLDREQKPLYNLILSATDSPLPPALPLSC 2037

Query: 61   TTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE 120
            T QV++V+ DVND +PEFI+  + +I EN+P NTVV A+KA+DRDEG+N YVEYS+ ++ 
Sbjct: 2038 TVQVTVVLLDVNDMSPEFISPTKISIIENAPSNTVVMAIKAVDRDEGRNGYVEYSLEDT- 2096

Query: 121  ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPI 180
              PF++GPVDGLLRV+  LDRE++SNYTLE+ AKDRGEP +SS T   + +LDENDN+P+
Sbjct: 2097 TLPFTVGPVDGLLRVSGSLDRELRSNYTLEVTAKDRGEPPRSSSTAVTVTVLDENDNSPV 2156

Query: 181  FDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRI 240
            FD + YSA+V EN S+GA+VLQVSA D D+G NGRVRY I  GDDN D TISED G++R+
Sbjct: 2157 FDPRQYSATVAENASIGASVLQVSAMDRDEGANGRVRYGIAMGDDNRDFTISEDGGVIRV 2216

Query: 241  AKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVN 300
            AKNLN+ERK++Y LTI+ EDC  +  E  R DTA V+I V DINDN PVFL SPYLA V 
Sbjct: 2217 AKNLNFERKSRYYLTIRGEDCASEVGETPRGDTAQVTITVIDINDNAPVFLDSPYLAHVM 2276

Query: 301  ENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGD 360
            EN +P     ++ V+A+DAD+ P+N  VRYFLK+            G  DLFR+N++TGD
Sbjct: 2277 ENMVPPGGGFVIQVKAYDADTPPYNDQVRYFLKE------------GDTDLFRINASTGD 2324

Query: 361  IYLLKSLDREKQAEYLLTLQAMDS 384
            I+LL+ LDRE  AEY LTL AMD+
Sbjct: 2325 IFLLRPLDRELVAEYTLTLVAMDT 2348

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374399|gb|EFR21960.1| hypothetical protein AND_15952 [Anopheles darlingi]

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/441 (50%), Positives = 299/441 (67%), Gaps = 71/441 (16%)

Query: 2   NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
           NGR+EYSI +GD++E F I  SNGT+   + LDRETK +YNLV+ A D AK P+KRLSST
Sbjct: 251 NGRVEYSITAGDEKEDFQIM-SNGTIRTRRMLDRETKGTYNLVITAQDCAKEPEKRLSST 309

Query: 62  TQV-----------------------------SIVIRDVNDNAPEFITANETTIPENSPL 92
            QV                             SI ++DVND APEF++ NET++ EN P+
Sbjct: 310 VQVGTSGKRKAKFGSILMHPLAIISSPVVVQVSISLKDVNDLAPEFVSPNETSVAENIPI 369

Query: 93  NTVVAALKAIDRDEGQNSYVEYSI----INSEATPFSLGPVDGLLRVAQKLDREIKSNYT 148
           NTV+ A+KA+DRDEG+N YVEY +     +    PF++GP DGLLRV+  LDREIK+ Y 
Sbjct: 370 NTVIMAIKAVDRDEGRNGYVEYQLDERSKDGTVVPFAVGPADGLLRVSGSLDREIKAAYD 429

Query: 149 LEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQ------ 202
           L++ AKDRG+PSKS++++  I +LDENDN+PIFD K YSA++ EN S+GA+VLQ      
Sbjct: 430 LQVVAKDRGDPSKSTQSRIRINVLDENDNSPIFDPKQYSAAIAENASIGASVLQVGSHHE 489

Query: 203 -----------------VSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLN 245
                            VSATD+D+G NGR+R++I +GDDN D TISED+G++R+AKNLN
Sbjct: 490 FTPRSASINGGPGDQDLVSATDIDEGANGRIRFSIAAGDDNRDFTISEDSGVVRVAKNLN 549

Query: 246 YERKAQYSLTIQAEDCGGDTE--ERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENT 303
           +ERK+ Y++T++AEDC GDT+    +RFDTA +SI ++DINDN P FL SPYLA + EN 
Sbjct: 550 FERKSLYTITVRAEDCAGDTDGGAEVRFDTARLSITITDINDNPPTFLDSPYLAYIMENV 609

Query: 304 LPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYL 363
           +P     ++TV+A+DADS PFN  VRYFLK+            G  D F++N++TG+I L
Sbjct: 610 IPPNGGYVITVRAYDADSPPFNSQVRYFLKE------------GDTDYFKINASTGEISL 657

Query: 364 LKSLDREKQAEYLLTLQAMDS 384
           L++LDRE Q EY+LTL AMD+
Sbjct: 658 LRALDRELQEEYILTLVAMDT 678

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
FB|FBgn0001075	5147	ft "fat" [Drosophila melanogas	0.833	0.062	0.553	1.4e-99
UNIPROTKB|Q6V0I7	4981	FAT4 "Protocadherin Fat 4" [Ho	0.838	0.064	0.462	4e-68
MGI|MGI:3045256	4981	Fat4 "FAT tumor suppressor hom	0.838	0.064	0.441	6.6e-68
UNIPROTKB|E1B949	4983	FAT4 "Uncharacterized protein"	0.838	0.064	0.444	8.4e-68
UNIPROTKB|E2RR85	4982	FAT4 "Uncharacterized protein"	0.838	0.064	0.447	1.2e-66
RGD|1564291	4981	Fat4 "FAT tumor suppressor hom	0.843	0.065	0.435	8.5e-66
UNIPROTKB|F1NLP0	4964	FAT4 "Uncharacterized protein"	0.843	0.065	0.447	4.6e-65
UNIPROTKB|F1NWW5	4592	FAT1 "Uncharacterized protein"	0.934	0.078	0.357	8e-52
UNIPROTKB|E1BKL9	4587	FAT1 "Uncharacterized protein"	0.833	0.069	0.388	1.5e-50
UNIPROTKB|F1SER9	4587	FAT1 "Uncharacterized protein"	0.833	0.069	0.382	3.1e-50

FB|FBgn0001075 ft "fat" [Drosophila melanogaster (taxid:7227)]

 Score = 931 (332.8 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
 Identities = 190/343 (55%), Positives = 246/343 (71%)

Query:    50 MAKPPQKRLSSTTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQN 109
             +A   Q+RLSST +V+I+I+DVND  P FI+ANET I EN  +NTVV A+KA+D DEG+N
Sbjct:  2139 LAHQKQQRLSSTVKVTILIKDVNDEVPVFISANETAIMENVAINTVVIAVKAVDNDEGRN 2198

Query:   110 SYVEY--------SIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSK 161
              Y++Y         +  S+  PFSL P DG LRV   LDRE++S+Y L I A+DRGEP +
Sbjct:  2199 GYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQ 2258

Query:   162 SSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTII 221
             S+ ++  IR+LDENDN+P+FD K YSASV EN S+GA VLQVSATD+D+G NGR+RY+I+
Sbjct:  2259 STESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIV 2318

Query:   222 SGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVS 281
              GD NHD +ISED G++R+AKNLNYER ++YSLT++AEDC     E    DTA ++I + 
Sbjct:  2319 LGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDCA---LENPAGDTAELTINIL 2375

Query:   282 DINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDXXXXXXX 341
             DINDN P FL SPYLA V ENT+P     ++TV A+DAD+ P N  VRYFLK+       
Sbjct:  2376 DINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDS---- 2431

Query:   342 XXXXXXXXDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
                     DLFR+N+++GDI LLK LDRE+Q+EY LTL AMD+
Sbjct:  2432 --------DLFRINASSGDIALLKPLDREQQSEYTLTLVAMDT 2466

GO:0005887 "integral to plasma membrane" evidence=ISS;NAS

GO:0000904 "cell morphogenesis involved in differentiation" evidence=IMP

GO:0016339 "calcium-dependent cell-cell adhesion" evidence=ISS;NAS

GO:0008283 "cell proliferation" evidence=IMP

GO:0007446 "imaginal disc growth" evidence=IMP

GO:0018149 "peptide cross-linking" evidence=IPI

GO:0016021 "integral to membrane" evidence=TAS

GO:0007156 "homophilic cell adhesion" evidence=IEA;ISS

GO:0050839 "cell adhesion molecule binding" evidence=ISS;IDA

GO:0004872 "receptor activity" evidence=ISS

GO:0045571 "negative regulation of imaginal disc growth" evidence=IMP;TAS

GO:0045317 "equator specification" evidence=IMP;NAS

GO:0042067 "establishment of ommatidial planar polarity" evidence=IGI;IMP;TAS

GO:0016318 "ommatidial rotation" evidence=TAS

GO:0001737 "establishment of imaginal disc-derived wing hair orientation" evidence=IMP;TAS

GO:0045198 "establishment of epithelial cell apical/basal polarity" evidence=IMP

GO:0007164 "establishment of tissue polarity" evidence=IMP;NAS

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=TAS

GO:0005886 "plasma membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0040008 "regulation of growth" evidence=IGI;IMP

GO:0045926 "negative regulation of growth" evidence=IMP

GO:0001736 "establishment of planar polarity" evidence=IGI;IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0048105 "establishment of body hair planar orientation" evidence=IMP

GO:0016337 "cell-cell adhesion" evidence=IMP

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

GO:0035329 "hippo signaling cascade" evidence=IGI

GO:0046620 "regulation of organ growth" evidence=IGI

GO:0035159 "regulation of tube length, open tracheal system" evidence=IMP

GO:0090176 "microtubule cytoskeleton organization involved in establishment of planar polarity" evidence=IMP

UNIPROTKB|Q6V0I7 FAT4 "Protocadherin Fat 4" [Homo sapiens (taxid:9606)]

 Score = 693 (249.0 bits), Expect = 4.0e-68, Sum P(2) = 4.0e-68
 Identities = 154/333 (46%), Positives = 204/333 (61%)

Query:     2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
             N +L YSI SGD    FT++  NG L  LK LDRE++S YNLVV   D+ + P  R +ST
Sbjct:  1976 NSQLTYSIASGDSLGQFTVD-KNGVLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTST 2034

Query:    62 TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA 121
              QVSI++ DVNDN P F++   T IPEN+P++TVV   +A D D G NSY+EY+++N   
Sbjct:  2035 AQVSIILLDVNDNPPTFLSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLG 2094

Query:   122 TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
               FS+G +DG +R+  +LDRE  SNYTL + A D+G+PS SS T+  + +LD NDNNPIF
Sbjct:  2095 NKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIF 2154

Query:   182 DSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIA 241
                 Y   + EN   G  ++QV A D D+G NG+VRY I++G+ N +  I    G + +A
Sbjct:  2155 AQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVA 2214

Query:   242 KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301
             K L+ E+   Y LT+QA D G       R DT+TVSI++ DIND  PVF  SPY   V E
Sbjct:  2215 KPLDREKTPTYHLTVQATDRGSTP----RTDTSTVSIVLLDINDFVPVFELSPYSVNVPE 2270

Query:   302 N--TLPGPSFRIMTVQAHDADSLPFNGLVRYFL 332
             N  TLP     I+ V A D D    N  + Y L
Sbjct:  2271 NLGTLPRT---ILQVVARD-DDRGSNSKLSYVL 2299

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:3045256 Fat4 "FAT tumor suppressor homolog 4 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 687 (246.9 bits), Expect = 6.6e-68, Sum P(2) = 6.6e-68
 Identities = 147/333 (44%), Positives = 203/333 (60%)

Query:     2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
             N +L YSI SGD    F ++  +G L  LK LDRE++S YNLV+   D+ +PP  R +ST
Sbjct:  1976 NSQLSYSIASGDSLGQFAVD-KHGVLKTLKALDRESQSFYNLVIQVHDLPQPPTSRFTST 2034

Query:    62 TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA 121
              QVSI++ DVNDN P F++   T IPEN+P++TVV   +A D D G NSY+EY+++N   
Sbjct:  2035 AQVSIILLDVNDNPPMFLSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPSG 2094

Query:   122 TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
               FS+G +DG + +  +LDRE  SNY+L + A D+G+P  SS T+  + +LD NDNNP+F
Sbjct:  2095 NKFSIGTIDGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVF 2154

Query:   182 DSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIA 241
                 Y   + ENI  G  ++QVSA D D+G NG+VRY I+ G+ + +  I    G + +A
Sbjct:  2155 AQAMYRVQIKENILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVA 2214

Query:   242 KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301
             K+L+ E    Y+LT+QA D G       R D+ TV+I + D+ND  PVF  SPY   V E
Sbjct:  2215 KSLDRETTPAYTLTVQATDRGSSP----RTDSCTVAITLLDMNDFVPVFELSPYSVNVPE 2270

Query:   302 N--TLPGPSFRIMTVQAHDADSLPFNGLVRYFL 332
             N  TLP     I+ V A D D  P N  + Y L
Sbjct:  2271 NLGTLPRA---ILQVVARDDDQGP-NSQLSYVL 2299

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1B949 FAT4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 686 (246.5 bits), Expect = 8.4e-68, Sum P(2) = 8.4e-68
 Identities = 148/333 (44%), Positives = 202/333 (60%)

Query:     2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
             N +L YSI SGD    FT++  NG L  LK LDRE++S YNLVV   D+ + P  R +ST
Sbjct:  1976 NSQLAYSIASGDSLGQFTVD-KNGVLKVLKPLDRESQSFYNLVVQVHDLPQLPASRFTST 2034

Query:    62 TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA 121
              Q+SI++ DVNDN P F++   T IPEN+P++T+V   +A D D G NSY+EY+++N   
Sbjct:  2035 AQISIILLDVNDNPPTFLSPKLTYIPENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPSG 2094

Query:   122 TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
               F++G +DG +R+  +LDRE  SNYTL + A D+G PS SS T+  + +LD NDNNP+F
Sbjct:  2095 NKFTIGTIDGEVRLTGELDREEVSNYTLTVVATDKGHPSLSSSTEVVVMVLDINDNNPVF 2154

Query:   182 DSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIA 241
                 Y   + EN   G  + QV A D D+G NG+VRY I+ G+ N +  I    G + +A
Sbjct:  2155 AQAMYKVEINENTLTGTDITQVFAADGDEGTNGQVRYGIVDGNANQEFRIDSVTGAITVA 2214

Query:   242 KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301
             K L+ E+   YSLT+QA D G       R DT+T+SI++ DIND  P+F  SPY   V E
Sbjct:  2215 KPLDREKTPTYSLTVQATDRGSTP----RTDTSTISIVLLDINDFVPIFELSPYSVNVPE 2270

Query:   302 N--TLPGPSFRIMTVQAHDADSLPFNGLVRYFL 332
             N  TLP     ++ V A D D    N  + Y L
Sbjct:  2271 NLGTLPRT---VLQVVARDDDQ-GSNSKLSYVL 2299

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

UNIPROTKB|E2RR85 FAT4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 678 (243.7 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
 Identities = 149/333 (44%), Positives = 202/333 (60%)

Query:     2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
             N +L +SI SGD    FT++  NG L  LK LDRE++S YNLVV   D+ + P  R +ST
Sbjct:  1976 NSQLAFSIASGDSLSQFTVD-KNGVLKVLKSLDRESQSFYNLVVQVHDLPQLPASRFTST 2034

Query:    62 TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA 121
               VSI++ DVNDN P F++   T IPEN+P++T+V   +A D D G NSY+EY+++N   
Sbjct:  2035 AHVSIILLDVNDNPPAFLSPKLTYIPENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPLG 2094

Query:   122 TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
               FS+G +DG +R+  +LDRE  SNYTL + A D+G+P+ SS T+  + +LD NDNNP+F
Sbjct:  2095 NKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPALSSSTEVVVMVLDINDNNPVF 2154

Query:   182 DSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIA 241
                 Y   + EN   G  ++QV A D D+G NG+VRY II G+ N +  I    G + +A
Sbjct:  2155 MQALYKVEINENTLTGTDIIQVYAADGDEGTNGQVRYGIIDGNANQEFRIDSVTGAITVA 2214

Query:   242 KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301
             K L+ E+   YSLT+QA D G       R DT TV+I++ DIND  P+F  SPY   V E
Sbjct:  2215 KPLDREKTPTYSLTVQATDRGSTP----RTDTTTVNIVLLDINDFVPMFELSPYSVNVPE 2270

Query:   302 N--TLPGPSFRIMTVQAHDADSLPFNGLVRYFL 332
             N  TLP     I+ V A D D    N  + Y L
Sbjct:  2271 NLGTLPRT---ILQVVARDDDQ-GSNSKLSYVL 2299

GO:0016021 "integral to membrane" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

RGD|1564291 Fat4 "FAT tumor suppressor homolog 4 (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 671 (241.3 bits), Expect = 8.5e-66, Sum P(2) = 8.5e-66
 Identities = 144/331 (43%), Positives = 199/331 (60%)

Query:     2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
             N +L YSI SGD    F ++  +G L  LK LDRE++S YNLV+   D+ +PP  R +ST
Sbjct:  1976 NSQLSYSIASGDSLGQFAVD-KHGVLKALKALDRESQSFYNLVIQVHDLPQPPASRFTST 2034

Query:    62 TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA 121
              QVSI++ DVNDN P F++   T IPEN+P++TVV   +A D D G NSY+EY+++N   
Sbjct:  2035 AQVSIILLDVNDNPPMFLSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPAG 2094

Query:   122 TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
               FS+G +DG + +  +LDRE  SNY+L + A D+G+P  SS T+  + +LD NDNNP+F
Sbjct:  2095 NKFSIGTIDGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVF 2154

Query:   182 DSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIA 241
                 Y   + EN   G  ++QVSA D D+G NG+VRY I+ G+ + +  I    G + +A
Sbjct:  2155 AQAMYRVQIKENTLTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVA 2214

Query:   242 KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301
             K+L+ E    Y LT+QA D G       R D+ TV+I + D+ND  PVF  SPY   V E
Sbjct:  2215 KSLDRETIPAYILTVQATDRGSSP----RTDSCTVAITLLDMNDFVPVFELSPYSVNVPE 2270

Query:   302 NTLPGPSFRIMTVQAHDADSLPFNGLVRYFL 332
             N    P   I+ V A D D  P N  + Y L
Sbjct:  2271 NLGALPR-TILQVVARDDDQGP-NSQLSYVL 2299

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NLP0 FAT4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 673 (242.0 bits), Expect = 4.6e-65, Sum P(2) = 4.6e-65
 Identities = 148/331 (44%), Positives = 201/331 (60%)

Query:     2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
             N +L +SI SGD    F I+ S G LS  + LDRE++S Y+LVV   DMA  P  R +ST
Sbjct:  1954 NSQLSFSIASGDSMGHFGIDNS-GVLSIQQPLDRESQSFYSLVVQVHDMAPLPASRYTST 2012

Query:    62 TQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA 121
              QVSI++ DVND+ P FI+   T IPEN+P++T+V   +A D D G NSY+EYS++    
Sbjct:  2013 AQVSIILLDVNDSPPSFISPKLTYIPENTPIDTIVFKAQATDPDSGPNSYIEYSLLRPLG 2072

Query:   122 TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
               FS+G +DG +R+  +LDRE  SNYTL + A D+G+PS SS T   + +LD NDNNP+F
Sbjct:  2073 NKFSIGTIDGEVRLIGELDREAVSNYTLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLF 2132

Query:   182 DSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIA 241
               K Y   + EN   G  ++QV ATD D+G NG+VRY+I+SGD  +   I    G++ +A
Sbjct:  2133 AQKLYRVELEENTLTGTDLIQVLATDGDEGTNGQVRYSIVSGDTGNQFRIDSVTGVITVA 2192

Query:   242 KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301
             K L+ E+K  Y L++Q+ D G       R DT TV+I++ D+ND  P F  SPY   V E
Sbjct:  2193 KPLDREKKPSYMLSVQSSDRGSSP----RTDTTTVNIVLKDVNDYVPTFELSPYNVNVPE 2248

Query:   302 NTLPGPSFRIMTVQAHDADSLPFNGLVRYFL 332
             N    P   I+ V A D D    N  + Y L
Sbjct:  2249 NLETLPKV-ILQVVARDDDQ-GLNSKLTYVL 2277

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NWW5 FAT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 557 (201.1 bits), Expect = 8.0e-52, P = 8.0e-52
 Identities = 138/386 (35%), Positives = 210/386 (54%)

Query:     2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
             N  + Y++  G   E F +    G L  L  LDRE ++ Y L+V ATD       R    
Sbjct:  3057 NAEITYTL-HGPGAEKFRLTADTGELKTLMPLDREQQAVYYLLVKATDGGG----RFCQA 3111

Query:    62 TQVSIVIRDVNDNAPEF-ITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE 120
               + + + DVNDNAPEF +     T+ EN+   T++  ++A D D G N  + YS++NS 
Sbjct:  3112 N-IILTLEDVNDNAPEFTVDPYSITVFENTEPKTLLTRVQATDADAGMNRKIHYSLVNSA 3170

Query:   121 ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSK-SSRTKFFIRLLDENDNNP 179
                FS+    G++R+ + LDRE+++ YTL ++A D G P + SS +   + +LD NDN P
Sbjct:  3171 EGQFSIDEFSGIIRLEKPLDRELQAVYTLTLRATDEGLPRRLSSTSNLIVSVLDINDNPP 3230

Query:   180 IFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDN-GLL 238
             +F+ + YSASV E+  VG  VLQ+ A   D   N  + Y+I+SG+++   +I     G +
Sbjct:  3231 VFEYREYSASVSEDTVVGTEVLQIHAASRDIEANAEITYSIVSGNEHGKFSIDSTTVGAI 3290

Query:   239 RIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLAL 298
              I  +L+YE   +Y LT++A D GG        D  TV+I V+DINDN PVF    Y A+
Sbjct:  3291 FIIDSLDYESSHEYYLTVEATD-GGTPSLS---DVVTVNINVTDINDNTPVFSQDTYTAV 3346

Query:   299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDXXXXXXXXXXXXXXXDLFRVNSTT 358
             ++E+ +   S  ++TV A DAD  P N  + Y + D               + F ++ + 
Sbjct:  3347 ISEDAVLEQS--VITVMADDADG-PSNNHIHYTITDGNQG-----------NPFTIDPSR 3392

Query:   359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
             G+I + K LDREK + Y LT+QA D+
Sbjct:  3393 GEIKVTKLLDREKISGYTLTVQASDN 3418

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0007015 "actin filament organization" evidence=IEA

GO:0007163 "establishment or maintenance of cell polarity" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

UNIPROTKB|E1BKL9 FAT1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 545 (196.9 bits), Expect = 1.5e-50, P = 1.5e-50
 Identities = 130/335 (38%), Positives = 192/335 (57%)

Query:     2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
             N  + Y++  G   E F +NP  G L     LDRE +++Y+L+V ATD       R    
Sbjct:  3055 NAEITYTLF-GPGAEKFKLNPDTGELKTSAPLDREEQAAYHLLVKATDGGG----RFCQA 3109

Query:    62 TQVSIVIRDVNDNAPEFITANET-TIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE 120
             + V + + DVNDNAPEF     T T+ EN+   T++  ++A D D G N  + YS++NS 
Sbjct:  3110 SVV-LTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDADAGLNRKISYSLLNSA 3168

Query:   121 ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRT-KFFIRLLDENDNNP 179
                FS+  + G++++ + LDRE+++ YTL +KA D G P + + T    I +LD NDN P
Sbjct:  3169 DGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDHGLPRRLTATGTIVISVLDINDNPP 3228

Query:   180 IFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLR 239
             +F+ + Y A+V E+I +G  VLQV A   D   N  + Y+IISG+++   +I    G + 
Sbjct:  3229 VFEYREYGATVSEDILIGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAIF 3288

Query:   240 IAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALV 299
             I +NL+YE   +Y LT++A D GG        D ATVSI V+DINDN PVF    Y A+V
Sbjct:  3289 IIENLDYESSHEYYLTVEATD-GGTPSLS---DVATVSINVTDINDNAPVFSQDTYTAVV 3344

Query:   300 NENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKD 334
             +E+ +   S  ++TV A DAD  P N  + Y + D
Sbjct:  3345 SEDAVLEQS--VITVMADDADG-PSNSHIHYAIID 3376

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0007163 "establishment or maintenance of cell polarity" evidence=IEA

GO:0007015 "actin filament organization" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1SER9 FAT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 542 (195.9 bits), Expect = 3.1e-50, P = 3.1e-50
 Identities = 128/335 (38%), Positives = 191/335 (57%)

Query:     2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
             N  + Y++  G   E F +NP  G L     LDRE +++YNL+V ATD       R    
Sbjct:  3054 NAEITYTLF-GPGAEKFKLNPDTGELKTSAPLDREEQATYNLLVKATDGGG----RFCQA 3108

Query:    62 TQVSIVIRDVNDNAPEFITANET-TIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE 120
               V + + DVNDNAPEF     T T+ EN+   T++  ++A D D G N  + YS+I+S 
Sbjct:  3109 NIV-LTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDADAGLNRKISYSLIDSA 3167

Query:   121 ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRT-KFFIRLLDENDNNP 179
                FS+  V G++++ + LDRE+++ YTL +KA D G P + + T    + +LD NDN P
Sbjct:  3168 DGQFSINEVSGIIQLEKPLDRELQAVYTLSLKAVDHGLPRRLTATGTVVVSVLDINDNPP 3227

Query:   180 IFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLR 239
             +F+ + Y A+V E++ +G  VLQV A   D   N  + Y+IISG+++   +I    G + 
Sbjct:  3228 VFEYREYGATVSEDVLIGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAIF 3287

Query:   240 IAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALV 299
             I +NL+YE   +Y LT++A D GG        D ATV+I V+DINDN PVF    Y A++
Sbjct:  3288 IIENLDYESSHEYYLTVEATD-GGTPSLS---DVATVNINVTDINDNTPVFSQDTYTAVI 3343

Query:   300 NENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKD 334
             +E+ +   S  ++TV A DAD  P N  + Y + D
Sbjct:  3344 SEDAVLEQS--VITVMADDADG-PSNSHIHYSIID 3375

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0007163 "establishment or maintenance of cell polarity" evidence=IEA

GO:0007015 "actin filament organization" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P33450	FAT_DROME	No assigned EC number	0.5058	0.9583	0.0714	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	384
cd11304	98	cd11304, Cadherin_repeat, Cadherin tandem repeat d	8e-31
cd11304	98	cd11304, Cadherin_repeat, Cadherin tandem repeat d	4e-28
smart00112	81	smart00112, CA, Cadherin repeats	5e-23
pfam00028	92	pfam00028, Cadherin, Cadherin domain	1e-22
cd11304	98	cd11304, Cadherin_repeat, Cadherin tandem repeat d	3e-22
smart00112	81	smart00112, CA, Cadherin repeats	4e-21
smart00112	81	smart00112, CA, Cadherin repeats	7e-21
pfam00028	92	pfam00028, Cadherin, Cadherin domain	5e-20
cd11304	98	cd11304, Cadherin_repeat, Cadherin tandem repeat d	6e-17
pfam00028	92	pfam00028, Cadherin, Cadherin domain	1e-16
pfam00028	92	pfam00028, Cadherin, Cadherin domain	2e-14
smart00112	81	smart00112, CA, Cadherin repeats	8e-11

>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain

 Score =  112 bits (283), Expect = 8e-31
 Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 4/102 (3%)

Query: 185 SYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNL 244
           SY  SVPEN   G  VL VSATD D G NG V Y+I+SG+++   +I    G +  AK L
Sbjct: 1   SYEVSVPENAPPGTVVLTVSATDPDSGENGEVTYSIVSGNEDGLFSIDPSTGEITTAKPL 60

Query: 245 NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDN 286
           + E ++ Y+LT+ A D GG         TATV+I V D+NDN
Sbjct: 61  DREEQSSYTLTVTATDGGGPP----LSSTATVTITVLDVNDN 98

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Length = 98

>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain

 Score =  105 bits (264), Expect = 4e-28
 Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 1/96 (1%)

Query: 83  ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSII-NSEATPFSLGPVDGLLRVAQKLDR 141
           E ++PEN+P  TVV  + A D D G+N  V YSI+  +E   FS+ P  G +  A+ LDR
Sbjct: 3   EVSVPENAPPGTVVLTVSATDPDSGENGEVTYSIVSGNEDGLFSIDPSTGEITTAKPLDR 62

Query: 142 EIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDN 177
           E +S+YTL + A D G P  SS     I +LD NDN
Sbjct: 63  EEQSSYTLTVTATDGGGPPLSSTATVTITVLDVNDN 98

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Length = 98

>gnl|CDD|214520 smart00112, CA, Cadherin repeats

 Score = 91.3 bits (227), Expect = 5e-23
 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 3/76 (3%)

Query: 1  DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
          +NG++ YSI+SG+D+ +F+I+P  G ++  K LDRE +  Y L V ATD   PP   LSS
Sbjct: 9  ENGKVTYSILSGNDDGLFSIDPETGEITTTKPLDREEQPEYTLTVEATDGGGPP---LSS 65

Query: 61 TTQVSIVIRDVNDNAP 76
          T  V+I + DVNDNAP
Sbjct: 66 TATVTITVLDVNDNAP 81

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Length = 81

>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain

 Score = 90.8 bits (226), Expect = 1e-22
 Identities = 43/95 (45%), Positives = 51/95 (53%), Gaps = 4/95 (4%)

Query: 186 YSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLN 245
           YSASVPEN  VG  VL V+ATD D G NGR+ Y+I+ G       I  D G L   K L+
Sbjct: 1   YSASVPENAPVGTEVLTVTATDADLGPNGRIFYSILGGGPGGWFRIDPDTGDLSTTKPLD 60

Query: 246 YERKAQYSLTIQAEDCGGDTEERIRFDTATVSILV 280
            E   +Y LT+ A D GG         T TV+I V
Sbjct: 61  RESIGEYELTVLATDSGG----PPLSSTTTVTITV 91

Length = 92

>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain

 Score = 90.1 bits (224), Expect = 3e-22
 Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 3/74 (4%)

Query: 1  DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
          +NG + YSIVSG+++ +F+I+PS G ++  K LDRE +SSY L V ATD   PP   LSS
Sbjct: 28 ENGEVTYSIVSGNEDGLFSIDPSTGEITTAKPLDREEQSSYTLTVTATDGGGPP---LSS 84

Query: 61 TTQVSIVIRDVNDN 74
          T  V+I + DVNDN
Sbjct: 85 TATVTITVLDVNDN 98

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Length = 98

>gnl|CDD|214520 smart00112, CA, Cadherin repeats

 Score = 86.2 bits (214), Expect = 4e-21
 Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 4/85 (4%)

Query: 204 SATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGG 263
           SATD D G NG+V Y+I+SG+D+   +I  + G +   K L+ E + +Y+LT++A D GG
Sbjct: 1   SATDADSGENGKVTYSILSGNDDGLFSIDPETGEITTTKPLDREEQPEYTLTVEATDGGG 60

Query: 264 DTEERIRFDTATVSILVSDINDNYP 288
                    TATV+I V D+NDN P
Sbjct: 61  ----PPLSSTATVTITVLDVNDNAP 81

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Length = 81

>gnl|CDD|214520 smart00112, CA, Cadherin repeats

 Score = 85.5 bits (212), Expect = 7e-21
 Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 100 KAIDRDEGQNSYVEYSII-NSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE 158
            A D D G+N  V YSI+  ++   FS+ P  G +   + LDRE +  YTL ++A D G 
Sbjct: 1   SATDADSGENGKVTYSILSGNDDGLFSIDPETGEITTTKPLDREEQPEYTLTVEATDGGG 60

Query: 159 PSKSSRTKFFIRLLDENDNNP 179
           P  SS     I +LD NDN P
Sbjct: 61  PPLSSTATVTITVLDVNDNAP 81

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Length = 81

>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain

 Score = 83.5 bits (207), Expect = 5e-20
 Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 85  TIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATP-FSLGPVDGLLRVAQKLDREI 143
           ++PEN+P+ T V  + A D D G N  + YSI+       F + P  G L   + LDRE 
Sbjct: 4   SVPENAPVGTEVLTVTATDADLGPNGRIFYSILGGGPGGWFRIDPDTGDLSTTKPLDRES 63

Query: 144 KSNYTLEIKAKDRGEPSKSSRTKFFIRLL 172
              Y L + A D G P  SS T   I +L
Sbjct: 64  IGEYELTVLATDSGGPPLSSTTTVTITVL 92

Length = 92

>gnl|CDD|206637 cd11304, Cadherin_repeat, Cadherin tandem repeat domain

 Score = 75.0 bits (185), Expect = 6e-17
 Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 14/91 (15%)

Query: 294 PYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFR 353
            Y   V EN  PG    ++TV A D DS   NG V Y +             G    LF 
Sbjct: 1   SYEVSVPENAPPG--TVVLTVSATDPDS-GENGEVTYSI-----------VSGNEDGLFS 46

Query: 354 VNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
           ++ +TG+I   K LDRE+Q+ Y LT+ A D 
Sbjct: 47  IDPSTGEITTAKPLDREEQSSYTLTVTATDG 77

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Length = 98

>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain

 Score = 74.3 bits (183), Expect = 1e-16
 Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 3/68 (4%)

Query: 1  DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
           NGR+ YSI+ G     F I+P  G LS  K LDRE+   Y L V+ATD   PP    SS
Sbjct: 27 PNGRIFYSILGGGPGGWFRIDPDTGDLSTTKPLDRESIGEYELTVLATDSGGPPL---SS 83

Query: 61 TTQVSIVI 68
          TT V+I +
Sbjct: 84 TTTVTITV 91

Length = 92

>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain

 Score = 68.1 bits (167), Expect = 2e-14
 Identities = 36/90 (40%), Positives = 44/90 (48%), Gaps = 14/90 (15%)

Query: 295 YLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRV 354
           Y A V EN   G    ++TV A DAD  P NG + Y +             GG G  FR+
Sbjct: 1   YSASVPENAPVGT--EVLTVTATDADLGP-NGRIFYSI-----------LGGGPGGWFRI 46

Query: 355 NSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
           +  TGD+   K LDRE   EY LT+ A DS
Sbjct: 47  DPDTGDLSTTKPLDRESIGEYELTVLATDS 76

Length = 92

>gnl|CDD|214520 smart00112, CA, Cadherin repeats

 Score = 57.4 bits (139), Expect = 8e-11
 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 12/70 (17%)

Query: 315 QAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAE 374
            A DADS   NG V Y +             G    LF ++  TG+I   K LDRE+Q E
Sbjct: 1   SATDADS-GENGKVTYSI-----------LSGNDDGLFSIDPETGEITTTKPLDREEQPE 48

Query: 375 YLLTLQAMDS 384
           Y LT++A D 
Sbjct: 49  YTLTVEATDG 58

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Length = 81

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	384
KOG4289|consensus	2531		100.0
KOG4289|consensus	2531		100.0
KOG1219|consensus	4289		100.0
KOG1219|consensus	4289		100.0
cd00031	199	CA Cadherin repeat domain; Cadherins are glycoprot	100.0
cd00031	199	CA Cadherin repeat domain; Cadherins are glycoprot	99.97
KOG1834|consensus	952		99.74
PF00028	93	Cadherin: Cadherin domain; InterPro: IPR002126 Cad	99.73
PF00028	93	Cadherin: Cadherin domain; InterPro: IPR002126 Cad	99.72
KOG1834|consensus	952		99.71
smart00112	79	CA Cadherin repeats. Cadherins are glycoproteins i	99.63
smart00112	79	CA Cadherin repeats. Cadherins are glycoproteins i	99.62
TIGR01965	99	VCBS_repeat VCBS repeat. This domain of about 100	97.22
PF08266	84	Cadherin_2: Cadherin-like; InterPro: IPR013164 Cad	97.11
smart00736	97	CADG Dystroglycan-type cadherin-like domains. Cadh	97.1
PF08758	90	Cadherin_pro: Cadherin prodomain like; InterPro: I	97.02
smart00736	97	CADG Dystroglycan-type cadherin-like domains. Cadh	96.98
PF08758	90	Cadherin_pro: Cadherin prodomain like; InterPro: I	96.88
PF08266	84	Cadherin_2: Cadherin-like; InterPro: IPR013164 Cad	96.82
TIGR01965	99	VCBS_repeat VCBS repeat. This domain of about 100	96.53
PF13750	158	Big_3_3: Bacterial Ig-like domain (group 3)	96.47
PF13750	158	Big_3_3: Bacterial Ig-like domain (group 3)	96.4
PF05345	49	He_PIG: Putative Ig domain; InterPro: IPR008009 Th	94.71
KOG3597|consensus	442		93.64
PF05345	49	He_PIG: Putative Ig domain; InterPro: IPR008009 Th	93.44
KOG3597|consensus	442		92.85
TIGR00845	928	caca sodium/calcium exchanger 1. This model is spe	92.4
TIGR00845	928	caca sodium/calcium exchanger 1. This model is spe	90.89
PF07495	66	Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi	88.96
TIGR00864	2740	PCC polycystin cation channel protein. Note: this	84.55
TIGR03660	137	T1SS_rpt_143 T1SS-143 repeat domain. This model re	84.31
TIGR00864	2740	PCC polycystin cation channel protein. Note: this	83.8
TIGR03660	137	T1SS_rpt_143 T1SS-143 repeat domain. This model re	82.07

>KOG4289|consensus

Probab=100.00  E-value=1.9e-61  Score=473.06  Aligned_cols=357  Identities=36%  Similarity=0.554  Sum_probs=338.5

Q ss_pred             CccEEEEEEeC---CCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEE
Q psy13120          2 NGRLEYSIVSG---DDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEF   78 (384)
Q Consensus         2 ~~~i~Y~i~~~---~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f   78 (384)
                      -+++.|++..-   -..++|+||+.+|.|++++.||||....+.|+|+|.|.+.|.   .|++++|+|.|.|+|||.|+|
T Consensus       193 a~rl~Ysm~al~dsRS~~lFslD~~sG~irta~~lDREt~e~HvlrVtA~d~~~P~---~SAtttv~V~V~D~nDhsPvF  269 (2531)
T KOG4289|consen  193 AGRLYYSMVALFDSRSQNLFSLDPMSGAIRTAKSLDRETKETHVLRVTAQDHGDPR---RSATTTVTVLVLDTNDHSPVF  269 (2531)
T ss_pred             cCceEEEeeeccchhccccEeeccccccchhhhhhhhhhhheeEEEEEeeecCCCc---ccceeEEEEEEeecCCCCccc
Confidence            36789999642   234689999999999999999999999999999999999875   699999999999999999999


Q ss_pred             ccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC-CCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeC
Q psy13120         79 ITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS-EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDR  156 (384)
Q Consensus        79 ~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~-~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~  156 (384)
                      .+. |...+.||.+.|..|.++.|+|.|.++|+.+.|++.++ ....|.|++.+|.|++..+||||+...|.|.|.|+|.
T Consensus       270 Eq~~Y~e~lREn~evGy~vLtvrAtD~Dsp~Nani~Yrl~eg~~~~~f~in~rSGvI~T~a~lDRE~~~~y~L~VeAsDq  349 (2531)
T KOG4289|consen  270 EQDEYREELRENLEVGYEVLTVRATDGDSPPNANIRYRLLEGNAKNVFEINPRSGVISTRAPLDREELESYQLDVEASDQ  349 (2531)
T ss_pred             chhHHHHHHhhccccCceEEEEEeccCCCCCCCceEEEecCCCccceeEEcCccceeeccCccCHHhhhheEEEEEeccC
Confidence            998 99999999999999999999999999999999999999 5678999999999999999999999999999999999


Q ss_pred             CCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCc
Q psy13120        157 GEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNG  236 (384)
Q Consensus       157 ~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G  236 (384)
                      |.++...++.|.|+|.|+|||+|+|....|.++|.|+..+++.|.+|.|+|.|.+.|+.+.|+|.+|+..+.|.||..+|
T Consensus       350 G~~pgp~Ta~V~itV~D~NDNaPqFse~~Yvvqv~Edvt~~avvlrV~AtDrD~g~Ng~VHYsi~Sgn~~G~f~id~~tG  429 (2531)
T KOG4289|consen  350 GRPPGPRTAMVEITVEDENDNAPQFSEKRYVVQVREDVTPPAVVLRVTATDRDKGTNGKVHYSIASGNGRGQFYIDSLTG  429 (2531)
T ss_pred             CCCCCCceEEEEEEEEecCCCCccccccceEEEecccCCCCceEEEEEecccCCCcCceEEEEeeccCccccEEEecccc
Confidence            99888889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEE
Q psy13120        237 LLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQA  316 (384)
Q Consensus       237 ~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a  316 (384)
                      +|.+..+||+|.. .|++.|+|.|++.|++    +.+.-+.|+|.|+|||+|.|...++.++|.|+.  +.|..+..+.|
T Consensus       430 el~vv~plD~e~~-~ytl~IrAqDggrPpL----sn~sgl~iqVlDINDhaPifvstpfq~tvlEnv--~lg~~v~~vqa  502 (2531)
T KOG4289|consen  430 ELDVVEPLDFENS-EYTLRIRAQDGGRPPL----SNTSGLVIQVLDINDHAPIFVSTPFQATVLENV--PLGYLVCHVQA  502 (2531)
T ss_pred             eEEEeccccccCC-eeEEEEEcccCCCCCc----cCCCceEEEEEecCCCCceeEechhhhhhhhcc--cccceEEEEec
Confidence            9999999999998 9999999999999987    677778899999999999999999999999999  55899999999


Q ss_pred             ecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccccEEEEEEEEEc
Q psy13120        317 HDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMD  383 (384)
Q Consensus       317 ~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D  383 (384)
                      .|+|.+. |+.+.|++.+              .+.|.|+..+|+|++++.||||+...|.|.|+|+|
T Consensus       503 idadsg~-na~l~y~laG--------------~~pf~I~~~SG~Itvtk~ldrEt~~~ysl~V~ard  554 (2531)
T KOG4289|consen  503 IDADSGE-NARLHYSLAG--------------VGPFQINNGSGWITVTKELDRETVEHYSLGVEARD  554 (2531)
T ss_pred             ccCCCCc-ccceeeeecc--------------CCCeeEecCCceEEEeecccccccceEEEEEEEcC
Confidence            9999999 9999999976              34899999999999999999999999999999998

>KOG4289|consensus

Probab=100.00  E-value=3.7e-58  Score=450.09  Aligned_cols=357  Identities=36%  Similarity=0.575  Sum_probs=336.3

Q ss_pred             CCccEEEEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEcc
Q psy13120          1 DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFIT   80 (384)
Q Consensus         1 ~~~~i~Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~   80 (384)
                      .|++|+|++.+|++...|.||+.+|.|+++.+||||+.+.|.|.|+|.|.|.++.+   .++.|.|+|.|+|||+|+|..
T Consensus       300 ~Nani~Yrl~eg~~~~~f~in~rSGvI~T~a~lDRE~~~~y~L~VeAsDqG~~pgp---~Ta~V~itV~D~NDNaPqFse  376 (2531)
T KOG4289|consen  300 PNANIRYRLLEGNAKNVFEINPRSGVISTRAPLDREELESYQLDVEASDQGRPPGP---RTAMVEITVEDENDNAPQFSE  376 (2531)
T ss_pred             CCCceEEEecCCCccceeEEcCccceeeccCccCHHhhhheEEEEEeccCCCCCCC---ceEEEEEEEEecCCCCccccc
Confidence            48999999999989899999999999999999999999999999999999987643   389999999999999999999


Q ss_pred             C-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC-CCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCC
Q psy13120         81 A-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS-EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE  158 (384)
Q Consensus        81 ~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~-~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~  158 (384)
                      . |.+.|.|+..+++.|.+++|+|.|.|.|+.+.|+|.++ ..|.|.|+..+|+|.+..+||+|.. .|++.|+|.|+|.
T Consensus       377 ~~Yvvqv~Edvt~~avvlrV~AtDrD~g~Ng~VHYsi~Sgn~~G~f~id~~tGel~vv~plD~e~~-~ytl~IrAqDggr  455 (2531)
T KOG4289|consen  377 KRYVVQVREDVTPPAVVLRVTATDRDKGTNGKVHYSIASGNGRGQFYIDSLTGELDVVEPLDFENS-EYTLRIRAQDGGR  455 (2531)
T ss_pred             cceEEEecccCCCCceEEEEEecccCCCcCceEEEEeeccCccccEEEecccceEEEeccccccCC-eeEEEEEcccCCC
Confidence            8 99999999999999999999999999999999999998 4788999999999999999999998 9999999999999


Q ss_pred             CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEE
Q psy13120        159 PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLL  238 (384)
Q Consensus       159 ~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l  238 (384)
                      |+++...-+.|.|+|+|||+|.|....+.++|.|+.+.|..+..+.|.|.|.+.++.+.|++. |  .+.|.|+..+|.|
T Consensus       456 PpLsn~sgl~iqVlDINDhaPifvstpfq~tvlEnv~lg~~v~~vqaidadsg~na~l~y~la-G--~~pf~I~~~SG~I  532 (2531)
T KOG4289|consen  456 PPLSNTSGLVIQVLDINDHAPIFVSTPFQATVLENVPLGYLVCHVQAIDADSGENARLHYSLA-G--VGPFQINNGSGWI  532 (2531)
T ss_pred             CCccCCCceEEEEEecCCCCceeEechhhhhhhhcccccceEEEEecccCCCCcccceeeeec-c--CCCeeEecCCceE
Confidence            999999999999999999999999999999999999999999999999999999999999997 3  2479999999999


Q ss_pred             EEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEEec
Q psy13120        239 RIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHD  318 (384)
Q Consensus       239 ~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D  318 (384)
                      ++++.||||+...|.|-|.|+|.+.+..    +++++|.|.+.|+||+.|.|.+..|...+.|++  +.|+.|.+++|.|
T Consensus       533 tvtk~ldrEt~~~ysl~V~ard~gtp~l----~tstsI~Vtv~dvndndP~Ft~~eytl~inED~--pvgsSI~tvtAvD  606 (2531)
T KOG4289|consen  533 TVTKELDRETVEHYSLGVEARDHGTPPL----STSTSISVTVLDVNDNDPTFTQKEYTLRINEDA--PVGSSIVTVTAVD  606 (2531)
T ss_pred             EEeecccccccceEEEEEEEcCCCCCcc----cccceEEEEecccCCCCCccccCceEEEecCCc--cccceEEEEEEec
Confidence            9999999999999999999999999986    889999999999999999999999999999999  6699999999999


Q ss_pred             CCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCc--ceEEEcccCCcccccEEEEEEEEEcC
Q psy13120        319 ADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT--GDIYLLKSLDREKQAEYLLTLQAMDS  384 (384)
Q Consensus       319 ~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~t--G~i~~~~~ld~e~~~~~~l~V~a~D~  384 (384)
                      .|.   +..++|.|.+           ++....|.|+...  |.|++.-++++.+.+.|.+.|+|+|+
T Consensus       607 ~d~---~s~ityqi~g-----------~ntrn~Fsi~si~g~Glitlalp~dkKqe~~~vl~vtAtDg  660 (2531)
T KOG4289|consen  607 RDA---NSVITYQITG-----------GNTRNRFSISSIGGGGLITLALPLDKKQERQYVLAVTATDG  660 (2531)
T ss_pred             ccc---ccceEEEecC-----------CcccccceeeccCCcceEEeecchhhcccceEEEEEEecCC
Confidence            997   6689999986           2347999998765  68888888999999999999999994

>KOG1219|consensus

Probab=100.00  E-value=1.3e-54  Score=437.29  Aligned_cols=360  Identities=34%  Similarity=0.526  Sum_probs=339.5

Q ss_pred             CCccEEEEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEcc
Q psy13120          1 DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFIT   80 (384)
Q Consensus         1 ~~~~i~Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~   80 (384)
                      +|++++|+|..  +.+.|+||+.||.+.+.+.||||.+..|+|.|+|.|.+.|.   +.+...+.|.|.|||||+|.|..
T Consensus       776 ~NG~v~fsL~n--~sdvfsIdp~tGivv~~~sLdrE~q~~y~l~I~a~dqp~pq---~~svv~l~vsvedVndnpPkci~  850 (4289)
T KOG1219|consen  776 NNGMVSFSLLN--KSDVFSIDPFTGIVVTSKSLDREGQTSYHLKIEARDQPPPQ---LFSVVELDVSVEDVNDNPPKCII  850 (4289)
T ss_pred             CCceEEEEecC--CcceEEecCcccEEEeccccCcccCceeEEEEEEcCCCCCc---eEEEEEEEEEEeeccCCCCcccc
Confidence            58999999975  56799999999999999999999999999999999998643   68888999999999999999998


Q ss_pred             C-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCCC
Q psy13120         81 A-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEP  159 (384)
Q Consensus        81 ~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~~  159 (384)
                      . +...|+|+.|.|+.+..+.|.|+|.|++++++|.+.....+ ++++..+|.+++.++||+|+...|.|.|.|.|+|.|
T Consensus       851 ~hsr~kipedlp~gt~~~~l~A~d~diGq~~kvry~l~~~~v~-~rvd~~sGavfi~~~LDf~k~~fynLsv~a~d~g~p  929 (4289)
T KOG1219|consen  851 RHSRSKIPEDLPYGTVTWQLVALDPDIGQLGKVRYYLTDDTVG-ERVDFPSGAVFIGKPLDFEKSDFYNLSVTAVDRGTP  929 (4289)
T ss_pred             ccccccCcccCCCceEEEEhhhcCcccCcCceeEEEEecCccc-cccccccccEEEecccccccccceEEEEEEecCCCc
Confidence            8 89999999999999999999999999999999999998765 599999999999999999999999999999999999


Q ss_pred             CCceeEEEEEEeccCCCC--CCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcE
Q psy13120        160 SKSSRTKFFIRLLDENDN--NPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGL  237 (384)
Q Consensus       160 ~~~~~~~v~I~V~dvnd~--~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~  237 (384)
                      .+++.|.+.|.+.|+|.|  ||.|..-.-.+.|.||++.|+.++++.|.|.|.+..+.+.|+|..|+..+.|+|+..+|.
T Consensus       930 ~lss~chl~Vevldv~enlhpp~F~~~v~e~~V~EnapiGT~vi~i~A~dedsgldg~l~Y~I~~gdg~g~FsId~~tG~ 1009 (4289)
T KOG1219|consen  930 ILSSICHLEVEVLDVNENLHPPEFISFVTEGHVLENAPIGTIVIRIQARDEDSGLDGELSYKIRTGDGDGIFSIDSTTGS 1009 (4289)
T ss_pred             ceeeeEEEEEEEeccCCCCCCcchheeeeeeeEeecCCcceEEEEEEEecCCCCccceEEEEEEcCCcceeEEecCCcce
Confidence            899999999999999887  899987777899999999999999999999999999999999999999999999999999


Q ss_pred             EEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEEe
Q psy13120        238 LRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAH  317 (384)
Q Consensus       238 l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~  317 (384)
                      |++.+.||+|....|.|+|.|+|.+..+.    ++.+.+.|.|+|+|||+|+|.++-|..+|.|++  +.+..+.++.|.
T Consensus      1010 irTl~~lDrE~ks~YwltveA~D~gt~~~----ssv~~vyI~ieDvNDn~Pq~s~pvy~asI~enS--p~~vsivq~ea~ 1083 (4289)
T KOG1219|consen 1010 IRTLKALDREKKSSYWLTVEAKDLGTVPL----SSVCEVYIEIEDVNDNVPQFSSPVYYASISENS--PETVSIVQAEAN 1083 (4289)
T ss_pred             EeechhhchhhcceEEEEEEEEecCCCcc----ccceeEEEEEEecCCCCcccCCceEeeeeccCC--CCceEEEEeccC
Confidence            99999999999999999999999999886    788999999999999999999999999999999  568899999999


Q ss_pred             cCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccccEEEEEEEEEcC
Q psy13120        318 DADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS  384 (384)
Q Consensus       318 D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D~  384 (384)
                      |+|... ++++.|.|.+           |+..++|+|++.||.|+..+.||||.+..|.|.|++.|+
T Consensus      1084 D~Dsss-n~kLmykI~s-----------Gnyq~FF~Id~~TG~iTt~r~LDRE~qdEHiLeVTi~D~ 1138 (4289)
T KOG1219|consen 1084 DPDSSS-NQKLMYKITS-----------GNYQGFFQIDPETGLITTIRRLDREKQDEHILEVTIQDN 1138 (4289)
T ss_pred             CCCccc-CcceEEEEcc-----------CCccceEEEccccceeeeehhhcccccccceEEEEEecC
Confidence            999766 8999999987           466799999999999999999999999999999999985

>KOG1219|consensus

Probab=100.00  E-value=3e-50  Score=405.99  Aligned_cols=359  Identities=31%  Similarity=0.489  Sum_probs=337.2

Q ss_pred             CccEEEEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccC
Q psy13120          2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITA   81 (384)
Q Consensus         2 ~~~i~Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~   81 (384)
                      |++++|-|..|+...-|.|+..+|.|.++++||+|....|.|.|+|.|.|.|.   .+++....|.|.|.|||+|.|.+.
T Consensus       672 ng~l~yvI~dgne~~~~~Id~qsg~itvas~ld~~~t~~yiLnvta~D~gtPq---kss~r~l~v~vkd~ndn~p~f~e~  748 (4289)
T KOG1219|consen  672 NGKLVYVIEDGNESICFLIDRQSGNITVASPLDNENTEQYILNVTAYDLGTPQ---KSSWRLLLVFVKDYNDNTPIFVER  748 (4289)
T ss_pred             CceEEEEEeCCccceEEEEecccceEEEecchhhhhhheeEEEEEEecCCCch---hhceeeEEEEEEecccCCcccccc
Confidence            78999999999988899999999999999999999999999999999999864   478888899999999999999988


Q ss_pred             -ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCCCC
Q psy13120         82 -NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPS  160 (384)
Q Consensus        82 -~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~~~  160 (384)
                       |.+.|.|+..+|+.|.++.+.|.|.|.|+.++|+|... ...|+|++.+|.+.+.++||||.+..|.|.|.|.|.+.|.
T Consensus       749 sy~vtvsedtepgs~Ia~vetnd~D~g~NG~v~fsL~n~-sdvfsIdp~tGivv~~~sLdrE~q~~y~l~I~a~dqp~pq  827 (4289)
T KOG1219|consen  749 SYHVTVSEDTEPGSFIAHVETNDTDGGNNGMVSFSLLNK-SDVFSIDPFTGIVVTSKSLDREGQTSYHLKIEARDQPPPQ  827 (4289)
T ss_pred             ceEEEEecCCCCCceEEEEEecccCCCCCceEEEEecCC-cceEEecCcccEEEeccccCcccCceeEEEEEEcCCCCCc
Confidence             99999999999999999999999999999999999985 3579999999999999999999999999999999999888


Q ss_pred             CceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEE
Q psy13120        161 KSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRI  240 (384)
Q Consensus       161 ~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~  240 (384)
                      +.+...+.|.|.|+|||+|.+....+...|+|+.+.|+++..+.|.|+|.|+.++++|.+..+.  ..+.++--+|.+.+
T Consensus       828 ~~svv~l~vsvedVndnpPkci~~hsr~kipedlp~gt~~~~l~A~d~diGq~~kvry~l~~~~--v~~rvd~~sGavfi  905 (4289)
T KOG1219|consen  828 LFSVVELDVSVEDVNDNPPKCIIRHSRSKIPEDLPYGTVTWQLVALDPDIGQLGKVRYYLTDDT--VGERVDFPSGAVFI  905 (4289)
T ss_pred             eEEEEEEEEEEeeccCCCCccccccccccCcccCCCceEEEEhhhcCcccCcCceeEEEEecCc--cccccccccccEEE
Confidence            9999999999999999999999999999999999999999999999999999999999998443  34588888999999


Q ss_pred             cccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCC--CCcccCCCeeEEEcCCCCCCCceEEEEEEEec
Q psy13120        241 AKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDN--YPVFLHSPYLALVNENTLPGPSFRIMTVQAHD  318 (384)
Q Consensus       241 ~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~--~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D  318 (384)
                      .++||||...-|+|.|+|.|++.+..    ++.+.+.|.+.|+|++  ||+|....-.+.|.||+  +.|+.++++.|.|
T Consensus       906 ~~~LDf~k~~fynLsv~a~d~g~p~l----ss~chl~Vevldv~enlhpp~F~~~v~e~~V~Ena--piGT~vi~i~A~d  979 (4289)
T KOG1219|consen  906 GKPLDFEKSDFYNLSVTAVDRGTPIL----SSICHLEVEVLDVNENLHPPEFISFVTEGHVLENA--PIGTIVIRIQARD  979 (4289)
T ss_pred             ecccccccccceEEEEEEecCCCcce----eeeEEEEEEEeccCCCCCCcchheeeeeeeEeecC--CcceEEEEEEEec
Confidence            99999999999999999999999854    8899999999999887  89999888889999999  6699999999999


Q ss_pred             CCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccccEEEEEEEEEcC
Q psy13120        319 ADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS  384 (384)
Q Consensus       319 ~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D~  384 (384)
                      .|.+. .+.++|+|..           |+..+.|+||..+|.|...+.||||....|-|+|.|+|.
T Consensus       980 edsgl-dg~l~Y~I~~-----------gdg~g~FsId~~tG~irTl~~lDrE~ks~YwltveA~D~ 1033 (4289)
T KOG1219|consen  980 EDSGL-DGELSYKIRT-----------GDGDGIFSIDSTTGSIRTLKALDREKKSSYWLTVEAKDL 1033 (4289)
T ss_pred             CCCCc-cceEEEEEEc-----------CCcceeEEecCCcceEeechhhchhhcceEEEEEEEEec
Confidence            99988 8999999997           456789999999999999999999999999999999984

>cd00031 CA Cadherin repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion; these domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium; plays a role in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-,CNR-,proto-,and FAT-family cadherin, desmocollin, and desmoglein, exists as monomers or dimers (hetero- and homo-); two copies of the repeat are present here

Probab=100.00  E-value=2.2e-31  Score=229.77  Aligned_cols=197  Identities=42%  Similarity=0.668  Sum_probs=181.9

Q ss_pred             ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCC-CCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCCCC
Q psy13120         82 NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA-TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPS  160 (384)
Q Consensus        82 ~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~-~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~~~  160 (384)
                      +.+.|.|+++.|+.++++.|.|+|.+.++.++|+|.++.. ++|.|++.+|.|++.+.||||....|.|.|.|+|.|.+.
T Consensus         2 ~~~~i~En~~~g~~v~~~~a~D~D~~~~~~~~y~i~~~~~~~~F~i~~~tG~l~~~~~lD~e~~~~~~l~v~a~D~g~~~   81 (199)
T cd00031           2 YSVSVPENAPPGTVVGTVSATDPDSGENGRVTYSILGGNEDGLFSIDPNTGVITTTKPLDREEQSEYTLTVVASDGGGPP   81 (199)
T ss_pred             eEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEEeCCCCcccEEEeCCCCEEEECCCCCCcCCceEEEEEEEEECCcCc
Confidence            5688999999999999999999999888889999999864 799999999999999999999999999999999988877


Q ss_pred             CceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEE
Q psy13120        161 KSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRI  240 (384)
Q Consensus       161 ~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~  240 (384)
                      .++...++|.|.|+||++|.|....|.+.+.|+.++|+.++++.|+|+|.+.++.+.|+|.++.....|.|++.+|.|.+
T Consensus        82 ~~~~~~v~I~V~d~Nd~~P~~~~~~~~~~v~e~~~~~~~i~~~~a~D~D~~~~~~~~y~l~~~~~~~~f~i~~~~G~i~~  161 (199)
T cd00031          82 LSSTATVTVTVLDVNDNPPVFEQSSYEASVPENAPPGTVVGTVTATDADSGENAKLTYSILSGNDKELFSIDPNTGIITL  161 (199)
T ss_pred             ceeEEEEEEEEccCCCCCCcccccceEEEEeCCCCCCCEEEEEEEEcCCCCCCccEEEEEeCCCCCCEEEEeCCceEEEe
Confidence            77999999999999999999998899999999999999999999999998878899999997665689999999999999


Q ss_pred             cccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120        241 AKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       241 ~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      .+.||||....|.|.|.|+|.+.+..    +.++.++|.|.|
T Consensus       162 ~~~ld~e~~~~~~l~v~a~D~~~~~~----~~~~~i~i~v~d  199 (199)
T cd00031         162 AKPLDREEKSSYELTVVATDGGGPPL----SSTATVTVTVLD  199 (199)
T ss_pred             CCccCCccCceEEEEEEEEECCCCCc----eeEEEEEEEEEC
Confidence            99999999999999999999986443    678888888865

>cd00031 CA Cadherin repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion; these domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium; plays a role in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-,CNR-,proto-,and FAT-family cadherin, desmocollin, and desmoglein, exists as monomers or dimers (hetero- and homo-); two copies of the repeat are present here

Probab=99.97  E-value=1.5e-28  Score=212.14  Aligned_cols=180  Identities=44%  Similarity=0.632  Sum_probs=165.4

Q ss_pred             eEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCC
Q psy13120        186 YSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDT  265 (384)
Q Consensus       186 ~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~  265 (384)
                      |.+.+.|+.+.|+.++++.|.|+|.+.+..+.|+|.++....+|.|++.+|.|.+.+.||||....|.|.|+|+|.+.+.
T Consensus         2 ~~~~i~En~~~g~~v~~~~a~D~D~~~~~~~~y~i~~~~~~~~F~i~~~tG~l~~~~~lD~e~~~~~~l~v~a~D~g~~~   81 (199)
T cd00031           2 YSVSVPENAPPGTVVGTVSATDPDSGENGRVTYSILGGNEDGLFSIDPNTGVITTTKPLDREEQSEYTLTVVASDGGGPP   81 (199)
T ss_pred             eEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEEeCCCCcccEEEeCCCCEEEECCCCCCcCCceEEEEEEEEECCcCc
Confidence            67899999999999999999999987778999999977666899999999999999999999999999999999976665


Q ss_pred             cceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCC
Q psy13120        266 EERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQ  345 (384)
Q Consensus       266 ~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~  345 (384)
                      .    +..+.|+|.|.|+||++|.|....|.+.+.|+..  .|..++++.|+|+|.+. ++.++|+|..           
T Consensus        82 ~----~~~~~v~I~V~d~Nd~~P~~~~~~~~~~v~e~~~--~~~~i~~~~a~D~D~~~-~~~~~y~l~~-----------  143 (199)
T cd00031          82 L----SSTATVTVTVLDVNDNPPVFEQSSYEASVPENAP--PGTVVGTVTATDADSGE-NAKLTYSILS-----------  143 (199)
T ss_pred             c----eeEEEEEEEEccCCCCCCcccccceEEEEeCCCC--CCCEEEEEEEEcCCCCC-CccEEEEEeC-----------
Confidence            3    5789999999999999999998999999999984  48899999999999875 7899999987           


Q ss_pred             CCC-CCceEEeCCcceEEEcccCCcccccEEEEEEEEEcC
Q psy13120        346 GGT-GDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS  384 (384)
Q Consensus       346 ~~~-~~~f~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D~  384 (384)
                       +. .++|.|++.+|.|.+.+.||||....|.|.|.|+|+
T Consensus       144 -~~~~~~f~i~~~~G~i~~~~~ld~e~~~~~~l~v~a~D~  182 (199)
T cd00031         144 -GNDKELFSIDPNTGIITLAKPLDREEKSSYELTVVATDG  182 (199)
T ss_pred             -CCCCCEEEEeCCceEEEeCCccCCccCceEEEEEEEEEC
Confidence             33 389999999999999999999999999999999995

>KOG1834|consensus

Probab=99.74  E-value=2.1e-16  Score=147.87  Aligned_cols=197  Identities=27%  Similarity=0.365  Sum_probs=155.9

Q ss_pred             EEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCC---CCceEEEEEEeCCCC-CCeEEECCC--cEEEEcc
Q psy13120        169 IRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDG---INGRVRYTIISGDDN-HDLTISEDN--GLLRIAK  242 (384)
Q Consensus       169 I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~---~~~~i~y~i~~~~~~-~~f~i~~~~--G~l~~~~  242 (384)
                      .....+|-+.|.. ...|...|.||--.=.....+.|.|.|.+   .+.-.-|.|.+.+-+ ...-+|..|  |.|+...
T Consensus        21 ~~aarankhkpwi-e~ey~gvV~Endntvll~Ppl~aLdkdaplr~ageiC~fklhgq~vPFdavVvdK~TGegvlRaK~   99 (952)
T KOG1834|consen   21 HHAARANKHKPWI-EEEYHGVVTENDNTVLLDPPLAALDKDAPLRYAGEICGFKLHGQPVPFDAVVVDKYTGEGVLRAKE   99 (952)
T ss_pred             cccccccccCccc-ccceeEEEEeCCceEEeCCCeeeecCCCCcccccccceeEecCCCCCceEEEEeccCCceEEeecC
Confidence            4455677777876 56789999999754344456888999874   223467888643221 122346555  5788889


Q ss_pred             cCCccccCeEEEEEEEEECCCCCcc--eeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEEecCC
Q psy13120        243 NLNYERKAQYSLTIQAEDCGGDTEE--RIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDAD  320 (384)
Q Consensus       243 ~lD~e~~~~~~l~V~a~D~~~~~~~--~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D~D  320 (384)
                      +||.|.++.|+|+|+|.|++..+..  ..++..++|.|.|.|||+++|+|....|.+.|.|+..   ...|++|.|.|.|
T Consensus       100 ~lDCelqkeytf~iQAydCg~gpdgtn~kKShkatvhIrVkDvNe~AP~f~ep~Yka~V~EGK~---yd~il~veAiD~D  176 (952)
T KOG1834|consen  100 PLDCELQKEYTFTIQAYDCGNGPDGTNTKKSHKATVHIRVKDVNEFAPVFKEPWYKAHVTEGKV---YDSILRVEAIDKD  176 (952)
T ss_pred             cccccccccceEEEEEEecCCCCCccccccccceEEEEEeccccccCchhcccceeeEEeccee---eeeeEEEEeecCC
Confidence            9999999999999999998876532  2357789999999999999999999999999999974   4579999999999


Q ss_pred             CCCCCceE-EEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccccEEEEEEEEEc
Q psy13120        321 SLPFNGLV-RYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMD  383 (384)
Q Consensus       321 ~~~~~~~i-~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D  383 (384)
                      .++.+++| .|.|..             ..-.|.|| +.|.|..+.+|+|.....|.|+|+|.|
T Consensus       177 Cspq~sqIC~YEI~t-------------~d~PFaId-n~G~irnTekLny~ke~~Y~ltVtAyD  226 (952)
T KOG1834|consen  177 CSPQYSQICEYEITT-------------PDVPFAID-NDGNIRNTEKLNYTKEHQYKLTVTAYD  226 (952)
T ss_pred             CCCcccceeEEEecC-------------CCCceEEc-CCCccccccccccccceeEEEEEEEEe
Confidence            98766676 566664             66789998 589999999999999999999999987

>PF00028 Cadherin: Cadherin domain; InterPro: IPR002126 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,]

Probab=99.73  E-value=1.6e-16  Score=119.20  Aligned_cols=92  Identities=40%  Similarity=0.584  Sum_probs=85.5

Q ss_pred             eEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEEC-CCC
Q psy13120        186 YSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDC-GGD  264 (384)
Q Consensus       186 ~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~-~~~  264 (384)
                      |.+.|+|+.++|+.++++.|.|+|.+.++.+.|+|.+++..++|.|++.+|.|.+.+.||||....|+|.|.|+|. +.+
T Consensus         1 Y~~~v~E~~~~g~~v~~v~a~D~D~~~n~~i~y~i~~~~~~~~F~I~~~tg~i~~~~~LD~E~~~~y~l~v~a~D~~~~~   80 (93)
T PF00028_consen    1 YSFSVPENAPPGTVVGQVTATDPDSGPNSQITYSILGGNPDGLFSIDPNTGEISLKKPLDRETQSSYQLTVRATDSGGSP   80 (93)
T ss_dssp             EEEEEETTGSTSSEEEEEEEEESSTSTTSSEEEEEEETTSTTSEEEETTTTEEEESSSSCTTTTSEEEEEEEEEETTTSS
T ss_pred             CEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEecCcccCceEEeeeeeccccceecCcccCCEEEEEEEEEECCCCC
Confidence            7899999999999999999999999899999999999988999999999999999999999999999999999999 555


Q ss_pred             CcceeeeeEEEEEEEEe
Q psy13120        265 TEERIRFDTATVSILVS  281 (384)
Q Consensus       265 ~~~~~~~~~~~v~i~V~  281 (384)
                      +    +++.++|+|+|+
T Consensus        81 ~----~~~~~~V~I~V~   93 (93)
T PF00028_consen   81 P----LSSTATVTINVL   93 (93)
T ss_dssp             E----EEEEEEEEEEEE
T ss_pred             C----CEEEEEEEEEEC
Confidence            5    478888888874

Cadherin-mediated cell-cell junctions are formed as a result of interaction between extracellular domains of identical cadherins, which are located on the membranes of the neighbouring cells. The stability of these adhesive junctions is ensured by binding of the intracellular cadherin domain with the actin cytoskeleton. There are a number of different isoforms distributed in a tissue-specific manner in a wide variety of organisms. Cells containing different cadherins tend to segregate in vitro, while those that contain the same cadherins tend to preferentially aggregate together. This observation is linked to the finding that cadherin expression causes morphological changes involving the positional segregation of cells into layers, suggesting they may play an important role in the sorting of different cell types during morphogenesis, histogenesis and regeneration. They may also be involved in the regulation of tight and gap junctions, and in the control of intercellular spacing. Cadherins are evolutionary related to the desmogleins which are component of intercellular desmosome junctions involved in the interaction of plaque proteins. Structurally, cadherins comprise a number of domains: classically, these include a signal sequence; a propeptide of around 130 residues; a single transmembrane domain and five tandemly repeated extracellular cadherin domains, 4 of which are cadherin repeats, and the fifth contains 4 conserved cysteines and a N-terminal cytoplasmic domain []. However, proteins are designated as members of the broadly defined cadherin family if they have one or more cadherin repeats. A cadherin repeat is an independently folding sequence of approximately 110 amino acids that contains motifs with the conserved sequences DRE, DXNDNAPXF, and DXD. Crystal structures have revealed that multiple cadherin domains form Ca2+-dependent rod-like structures with a conserved Ca2+-binding pocket at the domain-domain interface. Cadherins depend on calcium for their function: calcium ions bind to specific residues in each cadherin repeat to ensure its proper folding, to confer rigidity upon the extracellular domain and is essential for cadherin adhesive function and for protection against protease digestion.; GO: 0005509 calcium ion binding, 0007156 homophilic cell adhesion, 0016020 membrane; PDB: 2A4E_A 2A4C_B 2O72_A 2QVI_A 1NCJ_A 3Q2W_A 3Q2N_A 3LNH_B 3LNI_A 3Q2L_A ....

>PF00028 Cadherin: Cadherin domain; InterPro: IPR002126 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,]

Probab=99.72  E-value=1e-16  Score=120.31  Aligned_cols=91  Identities=38%  Similarity=0.626  Sum_probs=86.3

Q ss_pred             ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeC-CCC
Q psy13120         82 NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDR-GEP  159 (384)
Q Consensus        82 ~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~-~~~  159 (384)
                      |.++|+|++++|+.++++.|.|+|.+.++.+.|+|.++. .++|.|++.+|.|.+.++||||....|.|.|.|+|. +.|
T Consensus         1 Y~~~v~E~~~~g~~v~~v~a~D~D~~~n~~i~y~i~~~~~~~~F~I~~~tg~i~~~~~LD~E~~~~y~l~v~a~D~~~~~   80 (93)
T PF00028_consen    1 YSFSVPENAPPGTVVGQVTATDPDSGPNSQITYSILGGNPDGLFSIDPNTGEISLKKPLDRETQSSYQLTVRATDSGGSP   80 (93)
T ss_dssp             EEEEEETTGSTSSEEEEEEEEESSTSTTSSEEEEEEETTSTTSEEEETTTTEEEESSSSCTTTTSEEEEEEEEEETTTSS
T ss_pred             CEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEecCcccCceEEeeeeeccccceecCcccCCEEEEEEEEEECCCCC
Confidence            578999999999999999999999999999999999996 789999999999999999999999999999999999 888


Q ss_pred             CCceeEEEEEEec
Q psy13120        160 SKSSRTKFFIRLL  172 (384)
Q Consensus       160 ~~~~~~~v~I~V~  172 (384)
                      ++++.++|+|+|.
T Consensus        81 ~~~~~~~V~I~V~   93 (93)
T PF00028_consen   81 PLSSTATVTINVL   93 (93)
T ss_dssp             EEEEEEEEEEEEE
T ss_pred             CCEEEEEEEEEEC
Confidence            9999999999874

Cadherin-mediated cell-cell junctions are formed as a result of interaction between extracellular domains of identical cadherins, which are located on the membranes of the neighbouring cells. The stability of these adhesive junctions is ensured by binding of the intracellular cadherin domain with the actin cytoskeleton. There are a number of different isoforms distributed in a tissue-specific manner in a wide variety of organisms. Cells containing different cadherins tend to segregate in vitro, while those that contain the same cadherins tend to preferentially aggregate together. This observation is linked to the finding that cadherin expression causes morphological changes involving the positional segregation of cells into layers, suggesting they may play an important role in the sorting of different cell types during morphogenesis, histogenesis and regeneration. They may also be involved in the regulation of tight and gap junctions, and in the control of intercellular spacing. Cadherins are evolutionary related to the desmogleins which are component of intercellular desmosome junctions involved in the interaction of plaque proteins. Structurally, cadherins comprise a number of domains: classically, these include a signal sequence; a propeptide of around 130 residues; a single transmembrane domain and five tandemly repeated extracellular cadherin domains, 4 of which are cadherin repeats, and the fifth contains 4 conserved cysteines and a N-terminal cytoplasmic domain []. However, proteins are designated as members of the broadly defined cadherin family if they have one or more cadherin repeats. A cadherin repeat is an independently folding sequence of approximately 110 amino acids that contains motifs with the conserved sequences DRE, DXNDNAPXF, and DXD. Crystal structures have revealed that multiple cadherin domains form Ca2+-dependent rod-like structures with a conserved Ca2+-binding pocket at the domain-domain interface. Cadherins depend on calcium for their function: calcium ions bind to specific residues in each cadherin repeat to ensure its proper folding, to confer rigidity upon the extracellular domain and is essential for cadherin adhesive function and for protection against protease digestion.; GO: 0005509 calcium ion binding, 0007156 homophilic cell adhesion, 0016020 membrane; PDB: 2A4E_A 2A4C_B 2O72_A 2QVI_A 1NCJ_A 3Q2W_A 3Q2N_A 3LNH_B 3LNI_A 3Q2L_A ....

>KOG1834|consensus

Probab=99.71  E-value=8.1e-16  Score=144.02  Aligned_cols=209  Identities=28%  Similarity=0.423  Sum_probs=167.1

Q ss_pred             EEEEeecCCCCEEccCceeEeeCCCCCCcEEEEEEEEeCCCCC---CceEEEEEEcCCCCCeee---eCcc--eEEEEce
Q psy13120         66 IVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQ---NSYVEYSIINSEATPFSL---GPVD--GLLRVAQ  137 (384)
Q Consensus        66 I~V~dvNd~~P~f~~~~~~~v~E~~~~gt~v~~~~a~D~D~~~---~~~~~y~l~~~~~~~F~i---~~~~--G~i~~~~  137 (384)
                      ....-+|-+.|.....|...|.||...=.....+.|-|.|.+-   ....-|.|.+.+ -+|.+   |..+  |.|+.+.
T Consensus        21 ~~aarankhkpwie~ey~gvV~Endntvll~Ppl~aLdkdaplr~ageiC~fklhgq~-vPFdavVvdK~TGegvlRaK~   99 (952)
T KOG1834|consen   21 HHAARANKHKPWIEEEYHGVVTENDNTVLLDPPLAALDKDAPLRYAGEICGFKLHGQP-VPFDAVVVDKYTGEGVLRAKE   99 (952)
T ss_pred             cccccccccCcccccceeEEEEeCCceEEeCCCeeeecCCCCcccccccceeEecCCC-CCceEEEEeccCCceEEeecC
Confidence            4456678889999888999999996433333458888888731   223577777753 45654   5555  5899999


Q ss_pred             eCCccCCCeEEEEEEEEeCCCC------CCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCC
Q psy13120        138 KLDREIKSNYTLEIKAKDRGEP------SKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDG  211 (384)
Q Consensus       138 ~ld~e~~~~~~l~V~a~d~~~~------~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~  211 (384)
                      +||.|.++.|+|+|+|.|.|..      ..+..+++.|.|.|+|+.+|+|....|.+.|.|.. .-..|++|.|.|.|-+
T Consensus       100 ~lDCelqkeytf~iQAydCg~gpdgtn~kKShkatvhIrVkDvNe~AP~f~ep~Yka~V~EGK-~yd~il~veAiD~DCs  178 (952)
T KOG1834|consen  100 PLDCELQKEYTFTIQAYDCGNGPDGTNTKKSHKATVHIRVKDVNEFAPVFKEPWYKAHVTEGK-VYDSILRVEAIDKDCS  178 (952)
T ss_pred             cccccccccceEEEEEEecCCCCCccccccccceEEEEEeccccccCchhcccceeeEEecce-eeeeeEEEEeecCCCC
Confidence            9999999999999999997643      35778999999999999999999999999999985 4577899999999975


Q ss_pred             -CCc-eEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeec
Q psy13120        212 -ING-RVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDI  283 (384)
Q Consensus       212 -~~~-~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dv  283 (384)
                       +++ -..|.|+.  ..-.|.||. .|.|+.+.+|.|.....|.|+|+|.|++....    .+.+.|+|.|..+
T Consensus       179 pq~sqIC~YEI~t--~d~PFaIdn-~G~irnTekLny~ke~~Y~ltVtAyDCg~kra----a~d~lV~v~Vkp~  245 (952)
T KOG1834|consen  179 PQYSQICEYEITT--PDVPFAIDN-DGNIRNTEKLNYTKEHQYKLTVTAYDCGKKRA----ASDSLVTVHVKPT  245 (952)
T ss_pred             CcccceeEEEecC--CCCceEEcC-CCccccccccccccceeEEEEEEEEecccccc----cCcceEEEEecCc
Confidence             333 46899984  556799986 69999999999999999999999999998763    3447888888766

>smart00112 CA Cadherin repeats

Probab=99.63  E-value=2.7e-15  Score=108.81  Aligned_cols=78  Identities=40%  Similarity=0.645  Sum_probs=73.1

Q ss_pred             EeCCCCCCceEEEEEEcCCC-CCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCCCCCceeEEEEEEeccCCCCCC
Q psy13120        102 IDRDEGQNSYVEYSIINSEA-TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNP  179 (384)
Q Consensus       102 ~D~D~~~~~~~~y~l~~~~~-~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P  179 (384)
                      +|+|.+.++.+.|+|.++.. ++|.|++.+|.|.+.++||||....|.|.|.|+|.+.|++++.+.|+|.|.|+|||+|
T Consensus         1 ~D~D~g~n~~i~Y~i~~~~~~~~F~i~~~tg~i~~~~~LD~e~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~D~Nd~~P   79 (79)
T smart00112        1 TDADSGENGKVTYSILSGNEDGLFSIDPETGEITTTKPLDREEQPEYTLTVEATDGGGPPLSSTATVTVTVLDVNDNAP   79 (79)
T ss_pred             CCCCCCcCcEEEEEEecCCCCCEEEEeCCccEEEeCCccCeeCCCeEEEEEEEEECCCCCcccEEEEEEEEEECCCCCC
Confidence            47888888999999998865 8999999999999999999999999999999999999889999999999999999998

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium.

>smart00112 CA Cadherin repeats

Probab=99.62  E-value=4.9e-15  Score=107.45  Aligned_cols=79  Identities=42%  Similarity=0.689  Sum_probs=72.1

Q ss_pred             EeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCC
Q psy13120        206 TDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDIND  285 (384)
Q Consensus       206 ~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd  285 (384)
                      +|+|.+.++.+.|+|.+++...+|.|++.+|.|.+.++||||....|.|.|.|+|.+.+..    ++.++|+|.|.|+||
T Consensus         1 ~D~D~g~n~~i~Y~i~~~~~~~~F~i~~~tg~i~~~~~LD~e~~~~y~l~v~a~D~~~~~~----~~~~~v~I~V~D~Nd   76 (79)
T smart00112        1 TDADSGENGKVTYSILSGNEDGLFSIDPETGEITTTKPLDREEQPEYTLTVEATDGGGPPL----SSTATVTVTVLDVND   76 (79)
T ss_pred             CCCCCCcCcEEEEEEecCCCCCEEEEeCCccEEEeCCccCeeCCCeEEEEEEEEECCCCCc----ccEEEEEEEEEECCC
Confidence            4788888889999999777668999999999999999999999999999999999988754    789999999999999


Q ss_pred             CCC
Q psy13120        286 NYP  288 (384)
Q Consensus       286 ~~P  288 (384)
                      ++|
T Consensus        77 ~~P   79 (79)
T smart00112       77 NAP   79 (79)
T ss_pred             CCC
Confidence            998

Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium.

>TIGR01965 VCBS_repeat VCBS repeat

Probab=97.22  E-value=0.0031  Score=46.73  Aligned_cols=87  Identities=22%  Similarity=0.270  Sum_probs=58.6

Q ss_pred             EEEEEEeCCCCCCceEEEEEE--cCCCCCeeeeCcceEEEEc--------eeCCccCCCeEEEEEEEEeCCCCCCceeEE
Q psy13120         97 AALKAIDRDEGQNSYVEYSII--NSEATPFSLGPVDGLLRVA--------QKLDREIKSNYTLEIKAKDRGEPSKSSRTK  166 (384)
Q Consensus        97 ~~~~a~D~D~~~~~~~~y~l~--~~~~~~F~i~~~~G~i~~~--------~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~  166 (384)
                      ++|.++|+|.++.  .++++.  .+..|.|.|++ .|.....        +.|.....-.-.|+|.+.|+      ...+
T Consensus         2 G~Lt~sD~D~gd~--~~~s~~~~~g~yGtlti~~-~G~wtYtl~n~~~avq~L~~Ge~~tdsFtvtv~DG------tt~~   72 (99)
T TIGR01965         2 GQLTISDADAGQA--HFIAQTDAAGQYGTFSIDA-DGQWTYQADNSQTAVQALKAGETLTDTFTVTSADG------TSQT   72 (99)
T ss_pred             CceEEeCCCCCCc--eEEecccccCCcEEEEECC-CCcEEEEeCCCcHHHHhhcCCCEEEEEEEEEEeCC------CeEE
Confidence            5788999998665  556553  33466789987 6765543        12332233456788888886      2788


Q ss_pred             EEEEeccCCCCCCceeccceEEEEecCC
Q psy13120        167 FFIRLLDENDNNPIFDSKSYSASVPENI  194 (384)
Q Consensus       167 v~I~V~dvnd~~P~f~~~~~~~~v~E~~  194 (384)
                      |+|+|...|| +|+..... ...+.|+.
T Consensus        73 vtItI~GtND-apvi~~~~-~g~v~ED~   98 (99)
T TIGR01965        73 VTITITGAND-AAVIGGAD-TGSVTEDS   98 (99)
T ss_pred             EEEEEEccCC-CCEEeccc-ceeEecCC
Confidence            9999999999 88765433 46676653

This domain of about 100 residues is found multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion.

>PF08266 Cadherin_2: Cadherin-like; InterPro: IPR013164 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,]

Probab=97.11  E-value=0.00046  Score=49.76  Aligned_cols=62  Identities=23%  Similarity=0.383  Sum_probs=40.6

Q ss_pred             eEEEEecCCCCCcEEEEEEEEeCCCCCC--ceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccc
Q psy13120        186 YSASVPENISVGATVLQVSATDLDDGIN--GRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYER  248 (384)
Q Consensus       186 ~~~~v~E~~~~g~~v~~v~a~D~D~~~~--~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~  248 (384)
                      ...+|+|..+.|+.|+.+ |.|......  ....|.+.+.....+|.++..+|.|.+...+|||.
T Consensus         3 i~YsV~EE~~~Gt~IGni-a~dL~l~~~~l~~~~~ri~s~~~~~~~~v~~~tG~L~v~~rIDRE~   66 (84)
T PF08266_consen    3 IRYSVPEEMPPGTVIGNI-AKDLGLDPQSLSSRNFRIVSEGNSQYFRVNEKTGDLFVSERIDREE   66 (84)
T ss_dssp             EEEEEESS--TT-EEEEC-CCCCT--HHHHCCTTBEEE-SSSS-SEEE-TTTSEEEESS--SCCC
T ss_pred             eEEEeecCCCCCCEEEEh-HHhhCCCcccccccceEEeecCCcceeEecCCceeEEeCCccCHHH
Confidence            357899999999999998 445432210  12457777777788999999999999999999996

Cadherin-mediated cell-cell junctions are formed as a result of interaction between extracellular domains of identical cadherins, which are located on the membranes of the neighbouring cells. The stability of these adhesive junctions is ensured by binding of the intracellular cadherin domain with the actin cytoskeleton. There are a number of different isoforms distributed in a tissue-specific manner in a wide variety of organisms. Cells containing different cadherins tend to segregate in vitro, while those that contain the same cadherins tend to preferentially aggregate together. This observation is linked to the finding that cadherin expression causes morphological changes involving the positional segregation of cells into layers, suggesting they may play an important role in the sorting of different cell types during morphogenesis, histogenesis and regeneration. They may also be involved in the regulation of tight and gap junctions, and in the control of intercellular spacing. Cadherins are evolutionary related to the desmogleins which are component of intercellular desmosome junctions involved in the interaction of plaque proteins. Structurally, cadherins comprise a number of domains: classically, these include a signal sequence; a propeptide of around 130 residues; a single transmembrane domain and five tandemly repeated extracellular cadherin domains, 4 of which are cadherin repeats, and the fifth contains 4 conserved cysteines and a N-terminal cytoplasmic domain []. However, proteins are designated as members of the broadly defined cadherin family if they have one or more cadherin repeats. A cadherin repeat is an independently folding sequence of approximately 110 amino acids that contains motifs with the conserved sequences DRE, DXNDNAPXF, and DXD. Crystal structures have revealed that multiple cadherin domains form Ca2+-dependent rod-like structures with a conserved Ca2+-binding pocket at the domain-domain interface. Cadherins depend on calcium for their function: calcium ions bind to specific residues in each cadherin repeat to ensure its proper folding, to confer rigidity upon the extracellular domain and is essential for cadherin adhesive function and for protection against protease digestion. This entry represents a cadherin domain that is usually found at the N terminus of cadherin proteins.; PDB: 1WUZ_A 1WYJ_A.

>smart00736 CADG Dystroglycan-type cadherin-like domains

Probab=97.10  E-value=0.0092  Score=44.59  Aligned_cols=65  Identities=28%  Similarity=0.366  Sum_probs=50.9

Q ss_pred             CccEEEEEEeCC---CCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecC
Q psy13120          2 NGRLEYSIVSGD---DEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVND   73 (384)
Q Consensus         2 ~~~i~Y~i~~~~---~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd   73 (384)
                      +..++|++...+   -+.|.+.|+.++.|+-. +.... ...|.|+|.|+|..|     .++...++|.|.+.|+
T Consensus        29 ~~~lty~~~~~~~~~lP~Wl~fd~~~~~~~Gt-P~~~~-~g~~~i~v~a~D~~g-----~~~~~~f~i~V~~~~~   96 (97)
T smart00736       29 GDTLTYSATLSDGSALPSWLSFDSDTGTLSGT-PTNSD-VGSLSLKVTATDSSG-----ASASDTFTITVVNTND   96 (97)
T ss_pred             CCeEEEEEEeCCCCCCCCeEEEeCCCCEEEEE-CCCCC-CcEEEEEEEEEECCC-----CEEEEEEEEEEeCCCC
Confidence            567899997543   24799999999998874 33333 466999999999987     3788899999999886

Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions.

>PF08758 Cadherin_pro: Cadherin prodomain like; InterPro: IPR014868 Cadherins are a group of proteins that mediate calcium dependent cell-cell adhesion

Probab=97.02  E-value=0.011  Score=43.27  Aligned_cols=80  Identities=26%  Similarity=0.396  Sum_probs=43.9

Q ss_pred             CCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEE
Q psy13120        178 NPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQ  257 (384)
Q Consensus       178 ~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~  257 (384)
                      .|-|....|.+.|+.+...|..+++|.-.|...  +..+.|...  +  ..|.|.. .|.|.+++++.... ..-.+.|.
T Consensus         3 ~pGF~~~~~~~~Vp~~l~~g~~lg~V~f~dC~~--~~~~~~~ss--D--pdF~V~~-DGsVy~~r~v~l~~-~~~~F~V~   74 (90)
T PF08758_consen    3 RPGFSQKKYTFEVPSNLEAGQPLGKVNFEDCTG--RRRVIFESS--D--PDFRVLE-DGSVYAKRPVQLSS-EQRSFTVH   74 (90)
T ss_dssp             --B--S-EEEE----SS-SS--EEE---B--SS-----EEEE-------SEEEEET-TTEEEEES--S-SS-S-EEEEEE
T ss_pred             cCCcccceEEEEcCchhhCCcEEEEEEeccCCC--CCceEEecC--C--CCEEEcC-CCeEEEeeeEecCC-CceEEEEE
Confidence            478999999999999999999999999999963  455777653  2  2799987 59999999986543 34589999


Q ss_pred             EEECCCCC
Q psy13120        258 AEDCGGDT  265 (384)
Q Consensus       258 a~D~~~~~  265 (384)
                      |.|..+..
T Consensus        75 a~D~~~~~   82 (90)
T PF08758_consen   75 AWDSQTQE   82 (90)
T ss_dssp             EEETTTTE
T ss_pred             EECCCCCe
Confidence            99988764

They are activated through cleavage of a prosequence in the late Golgi. This protein corresponds to the folded region of the prosequence, and is termed the prodomain. The prodomain shows structural resemblance to the cadherin domain, but lacks all the features known to be important for cadherin-cadherin interactions []. ; GO: 0007155 cell adhesion, 0016021 integral to membrane; PDB: 1OP4_A.

>smart00736 CADG Dystroglycan-type cadherin-like domains

Probab=96.98  E-value=0.018  Score=42.98  Aligned_cols=70  Identities=27%  Similarity=0.309  Sum_probs=53.0

Q ss_pred             EEeCCCCCCceEEEEEEeC---CCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEe
Q psy13120        205 ATDLDDGINGRVRYTIISG---DDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVS  281 (384)
Q Consensus       205 a~D~D~~~~~~i~y~i~~~---~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~  281 (384)
                      ..|+|   +..++|++...   ..+.|..+++.++.+.-. +.. +..+.|.+.|+|+|+.+.      +....++|.|.
T Consensus        24 F~d~d---~~~lty~~~~~~~~~lP~Wl~fd~~~~~~~Gt-P~~-~~~g~~~i~v~a~D~~g~------~~~~~f~i~V~   92 (97)
T smart00736       24 FTDAD---GDTLTYSATLSDGSALPSWLSFDSDTGTLSGT-PTN-SDVGSLSLKVTATDSSGA------SASDTFTITVV   92 (97)
T ss_pred             eECCC---CCeEEEEEEeCCCCCCCCeEEEeCCCCEEEEE-CCC-CCCcEEEEEEEEEECCCC------EEEEEEEEEEe
Confidence            45666   45788988643   336799999999988764 433 235679999999999874      56889999999


Q ss_pred             ecCC
Q psy13120        282 DIND  285 (384)
Q Consensus       282 dvNd  285 (384)
                      +.|+
T Consensus        93 ~~~~   96 (97)
T smart00736       93 NTND   96 (97)
T ss_pred             CCCC
Confidence            9886

Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions.

>PF08758 Cadherin_pro: Cadherin prodomain like; InterPro: IPR014868 Cadherins are a group of proteins that mediate calcium dependent cell-cell adhesion

Probab=96.88  E-value=0.0064  Score=44.48  Aligned_cols=76  Identities=24%  Similarity=0.264  Sum_probs=40.5

Q ss_pred             CCcccCCCeeEEEcCCCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEccc
Q psy13120        287 YPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKS  366 (384)
Q Consensus       287 ~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~  366 (384)
                      .|-|.+..|.+.|+.+.  ..|..+++|...|...   +..+.|...+               ..|.|.+ .|.|+++++
T Consensus         3 ~pGF~~~~~~~~Vp~~l--~~g~~lg~V~f~dC~~---~~~~~~~ssD---------------pdF~V~~-DGsVy~~r~   61 (90)
T PF08758_consen    3 RPGFSQKKYTFEVPSNL--EAGQPLGKVNFEDCTG---RRRVIFESSD---------------PDFRVLE-DGSVYAKRP   61 (90)
T ss_dssp             --B--S-EEEE----SS---SS--EEE---B--SS------EEEE------------------SEEEEET-TTEEEEES-
T ss_pred             cCCcccceEEEEcCchh--hCCcEEEEEEeccCCC---CCceEEecCC---------------CCEEEcC-CCeEEEeee
Confidence            58899999999999997  4589999999999864   5578887654               4899985 799999999


Q ss_pred             CCcccccEEEEEEEEEcC
Q psy13120        367 LDREKQAEYLLTLQAMDS  384 (384)
Q Consensus       367 ld~e~~~~~~l~V~a~D~  384 (384)
                      +...... -.|.|.|.|+
T Consensus        62 v~l~~~~-~~F~V~a~D~   78 (90)
T PF08758_consen   62 VQLSSEQ-RSFTVHAWDS   78 (90)
T ss_dssp             -S-SSS--EEEEEEEEET
T ss_pred             EecCCCc-eEEEEEEECC
Confidence            8755443 4799999885

They are activated through cleavage of a prosequence in the late Golgi. This protein corresponds to the folded region of the prosequence, and is termed the prodomain. The prodomain shows structural resemblance to the cadherin domain, but lacks all the features known to be important for cadherin-cadherin interactions []. ; GO: 0007155 cell adhesion, 0016021 integral to membrane; PDB: 1OP4_A.

>PF08266 Cadherin_2: Cadherin-like; InterPro: IPR013164 Cadherins are a family of adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in all solid tissues of the organism which modulate a wide variety of processes including cell polarisation and migration [, ,]

Probab=96.82  E-value=0.00055  Score=49.35  Aligned_cols=60  Identities=25%  Similarity=0.406  Sum_probs=37.3

Q ss_pred             eeEeeCCCCCCcEEEEEEEEeCCCCCC--ceEEEEEEcC-CCCCeeeeCcceEEEEceeCCccC
Q psy13120         83 ETTIPENSPLNTVVAALKAIDRDEGQN--SYVEYSIINS-EATPFSLGPVDGLLRVAQKLDREI  143 (384)
Q Consensus        83 ~~~v~E~~~~gt~v~~~~a~D~D~~~~--~~~~y~l~~~-~~~~F~i~~~~G~i~~~~~ld~e~  143 (384)
                      ..+|+|..+.|+.||.+. .|......  ..-.|++.+. ...+|.++..+|.|.++..+|||.
T Consensus         4 ~YsV~EE~~~Gt~IGnia-~dL~l~~~~l~~~~~ri~s~~~~~~~~v~~~tG~L~v~~rIDRE~   66 (84)
T PF08266_consen    4 RYSVPEEMPPGTVIGNIA-KDLGLDPQSLSSRNFRIVSEGNSQYFRVNEKTGDLFVSERIDREE   66 (84)
T ss_dssp             EEEEESS--TT-EEEECC-CCCT--HHHHCCTTBEEE-SSSS-SEEE-TTTSEEEESS--SCCC
T ss_pred             EEEeecCCCCCCEEEEhH-HhhCCCcccccccceEEeecCCcceeEecCCceeEEeCCccCHHH
Confidence            468999999999999994 45432211  1124665554 466899999999999999999996

Cadherin-mediated cell-cell junctions are formed as a result of interaction between extracellular domains of identical cadherins, which are located on the membranes of the neighbouring cells. The stability of these adhesive junctions is ensured by binding of the intracellular cadherin domain with the actin cytoskeleton. There are a number of different isoforms distributed in a tissue-specific manner in a wide variety of organisms. Cells containing different cadherins tend to segregate in vitro, while those that contain the same cadherins tend to preferentially aggregate together. This observation is linked to the finding that cadherin expression causes morphological changes involving the positional segregation of cells into layers, suggesting they may play an important role in the sorting of different cell types during morphogenesis, histogenesis and regeneration. They may also be involved in the regulation of tight and gap junctions, and in the control of intercellular spacing. Cadherins are evolutionary related to the desmogleins which are component of intercellular desmosome junctions involved in the interaction of plaque proteins. Structurally, cadherins comprise a number of domains: classically, these include a signal sequence; a propeptide of around 130 residues; a single transmembrane domain and five tandemly repeated extracellular cadherin domains, 4 of which are cadherin repeats, and the fifth contains 4 conserved cysteines and a N-terminal cytoplasmic domain []. However, proteins are designated as members of the broadly defined cadherin family if they have one or more cadherin repeats. A cadherin repeat is an independently folding sequence of approximately 110 amino acids that contains motifs with the conserved sequences DRE, DXNDNAPXF, and DXD. Crystal structures have revealed that multiple cadherin domains form Ca2+-dependent rod-like structures with a conserved Ca2+-binding pocket at the domain-domain interface. Cadherins depend on calcium for their function: calcium ions bind to specific residues in each cadherin repeat to ensure its proper folding, to confer rigidity upon the extracellular domain and is essential for cadherin adhesive function and for protection against protease digestion. This entry represents a cadherin domain that is usually found at the N terminus of cadherin proteins.; PDB: 1WUZ_A 1WYJ_A.

>TIGR01965 VCBS_repeat VCBS repeat

Probab=96.53  E-value=0.031  Score=41.43  Aligned_cols=87  Identities=20%  Similarity=0.213  Sum_probs=55.0

Q ss_pred             EEEEEEeCCCCCCceEEEEEEe-CCCCCCeEEECCCcEEEEc--------ccCCccccCeEEEEEEEEECCCCCcceeee
Q psy13120        201 LQVSATDLDDGINGRVRYTIIS-GDDNHDLTISEDNGLLRIA--------KNLNYERKAQYSLTIQAEDCGGDTEERIRF  271 (384)
Q Consensus       201 ~~v~a~D~D~~~~~~i~y~i~~-~~~~~~f~i~~~~G~l~~~--------~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~  271 (384)
                      +++.++|+|.+.  ...+++.. ....+.|.|++ .|.....        +.|.--+...-.|+|++.|+.         
T Consensus         2 G~Lt~sD~D~gd--~~~~s~~~~~g~yGtlti~~-~G~wtYtl~n~~~avq~L~~Ge~~tdsFtvtv~DGt---------   69 (99)
T TIGR01965         2 GQLTISDADAGQ--AHFIAQTDAAGQYGTFSIDA-DGQWTYQADNSQTAVQALKAGETLTDTFTVTSADGT---------   69 (99)
T ss_pred             CceEEeCCCCCC--ceEEecccccCCcEEEEECC-CCcEEEEeCCCcHHHHhhcCCCEEEEEEEEEEeCCC---------
Confidence            457888888643  34555531 12345578876 5655432        223322344678889999962         


Q ss_pred             eEEEEEEEEeecCCCCCcccCCCeeEEEcCC
Q psy13120        272 DTATVSILVSDINDNYPVFLHSPYLALVNEN  302 (384)
Q Consensus       272 ~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~  302 (384)
                       .++|+|+|.-.|| +|+... .-...+.|+
T Consensus        70 -t~~vtItI~GtND-apvi~~-~~~g~v~ED   97 (99)
T TIGR01965        70 -SQTVTITITGAND-AAVIGG-ADTGSVTED   97 (99)
T ss_pred             -eEEEEEEEEccCC-CCEEec-ccceeEecC
Confidence             5889999999999 887653 334666665

This domain of about 100 residues is found multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion.

>PF13750 Big_3_3: Bacterial Ig-like domain (group 3)

Probab=96.47  E-value=0.38  Score=39.41  Aligned_cols=128  Identities=23%  Similarity=0.365  Sum_probs=70.1

Q ss_pred             CCeEEEEE-EEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCC-CcEEEEEEEEeCCCCCCceEEEEEE
Q psy13120        144 KSNYTLEI-KAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISV-GATVLQVSATDLDDGINGRVRYTII  221 (384)
Q Consensus       144 ~~~~~l~V-~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~-g~~v~~v~a~D~D~~~~~~i~y~i~  221 (384)
                      ...|.+++ .|.|..+  ......+...+. ++..+|.+.. .....+..+... +..=..+.++|..... .--..+|.
T Consensus        14 dG~Y~l~~~~a~D~ag--N~~~~~~~~~~~-iD~T~Ptisi-~~~~~~~~g~~v~~~~~i~i~~tD~~~~~-~i~sv~l~   88 (158)
T PF13750_consen   14 DGSYTLTVVTATDAAG--NTSTSTVSETFT-IDNTPPTISI-SDGASVANGSTVYGLVNISINVTDNSDDS-KITSVSLT   88 (158)
T ss_pred             CccEEEEEEEEEecCC--CEEEEEEeeEEE-EcCCCCEEEE-ecCCccCCCccccceeeeEEEEEeCCCCc-eEEEEEEE
Confidence            46899999 7999865  333344332222 2345887754 111233333322 2233457777766433 33556776


Q ss_pred             eCCCCCCeEEE--C-CCcEEEEc--ccC-CccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120        222 SGDDNHDLTIS--E-DNGLLRIA--KNL-NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       222 ~~~~~~~f~i~--~-~~G~l~~~--~~l-D~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      +|.......+.  . ..|...+.  +.+ ..|....|+|+|.|+|..+..      .+..+......
T Consensus        89 Gg~~~d~v~ls~~~~~~~~~~~~yp~~fpsle~~~~YtLtV~a~D~aGN~------~~~si~F~y~P  149 (158)
T PF13750_consen   89 GGPASDSVSLSWTNKGNGVYTLEYPRIFPSLEADDSYTLTVSATDKAGNQ------STKSISFSYMP  149 (158)
T ss_pred             CCcccceEEEeeEeccCceEEeecccccCCcCCCCeEEEEEEEEecCCCE------EEEEEEEEEeC
Confidence            55544433321  1 13333332  111 236678999999999998874      46666666553

>PF13750 Big_3_3: Bacterial Ig-like domain (group 3)

Probab=96.40  E-value=0.42  Score=39.13  Aligned_cols=127  Identities=21%  Similarity=0.331  Sum_probs=71.7

Q ss_pred             CCcEEEEEE-EEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccCceeEeeCCCCC-CcEEEEEEEEeCCCCCCceEEE
Q psy13120         37 TKSSYNLVV-MATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITANETTIPENSPL-NTVVAALKAIDRDEGQNSYVEY  114 (384)
Q Consensus        37 ~~~~~~l~v-~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~v~E~~~~-gt~v~~~~a~D~D~~~~~~~~y  114 (384)
                      ....|.+++ +|.|..|.     ..+..+..++. +...||.+.-.....+..+... +..-..+.++|...+. ..-..
T Consensus        13 ~dG~Y~l~~~~a~D~agN-----~~~~~~~~~~~-iD~T~Ptisi~~~~~~~~g~~v~~~~~i~i~~tD~~~~~-~i~sv   85 (158)
T PF13750_consen   13 PDGSYTLTVVTATDAAGN-----TSTSTVSETFT-IDNTPPTISISDGASVANGSTVYGLVNISINVTDNSDDS-KITSV   85 (158)
T ss_pred             CCccEEEEEEEEEecCCC-----EEEEEEeeEEE-EcCCCCEEEEecCCccCCCccccceeeeEEEEEeCCCCc-eEEEE
Confidence            456899999 89999874     34444443333 3456888755222223333222 3333457787776543 34567


Q ss_pred             EEEcCCC-CCe--eeeC-cceEEEEc--ee-CCccCCCeEEEEEEEEeCCCCCCceeEEEEEEec
Q psy13120        115 SIINSEA-TPF--SLGP-VDGLLRVA--QK-LDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLL  172 (384)
Q Consensus       115 ~l~~~~~-~~F--~i~~-~~G~i~~~--~~-ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~  172 (384)
                      +|.++.. ..-  .... ..|...+.  +. ...|....|+|+|.|.|..+  ...+..+.....
T Consensus        86 ~l~Gg~~~d~v~ls~~~~~~~~~~~~yp~~fpsle~~~~YtLtV~a~D~aG--N~~~~si~F~y~  148 (158)
T PF13750_consen   86 SLTGGPASDSVSLSWTNKGNGVYTLEYPRIFPSLEADDSYTLTVSATDKAG--NQSTKSISFSYM  148 (158)
T ss_pred             EEECCcccceEEEeeEeccCceEEeecccccCCcCCCCeEEEEEEEEecCC--CEEEEEEEEEEe
Confidence            7776642 211  1111 13333332  11 13477889999999999865  556666666554

>PF05345 He_PIG: Putative Ig domain; InterPro: IPR008009 This alignment represents the conserved core region of a ~90 residue repeat found in several haemagglutinins and other cell surface proteins

Probab=94.71  E-value=0.14  Score=32.77  Aligned_cols=36  Identities=22%  Similarity=0.299  Sum_probs=29.3

Q ss_pred             CCCCceEEeCCcceEEEcccCCcc-cccEEEEEEEEEcC
Q psy13120        347 GTGDLFRVNSTTGDIYLLKSLDRE-KQAEYLLTLQAMDS  384 (384)
Q Consensus       347 ~~~~~f~Id~~tG~i~~~~~ld~e-~~~~~~l~V~a~D~  384 (384)
                      .-+.++.||+.+|.|+-.  .+.. ..+.|.+.|.|+|+
T Consensus        11 ~LP~gLs~d~~tG~isGt--p~~~~~~G~y~~~vtatd~   47 (49)
T PF05345_consen   11 GLPSGLSLDPSTGTISGT--PTSSVQPGTYTFTVTATDG   47 (49)
T ss_pred             CCCCcEEEeCCCCEEEee--cCCCccccEEEEEEEEEcC
Confidence            457899999999999987  3333 34799999999985

Sequence similarities to Hyalin (IPR003410 from INTERPRO) and the PKD domain (IPR000601 from INTERPRO) suggest an Ig-like fold so this family may be similar in function to the (IPR003791 from INTERPRO) and (IPR003790 from INTERPRO) protein families.

>KOG3597|consensus

Probab=93.64  E-value=4.4  Score=38.81  Aligned_cols=153  Identities=20%  Similarity=0.218  Sum_probs=86.2

Q ss_pred             EEEEEEEEEeecCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCC-----eeeeC------
Q psy13120         61 TTQVSIVIRDVNDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATP-----FSLGP------  128 (384)
Q Consensus        61 ~~~v~I~V~dvNd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~~~-----F~i~~------  128 (384)
                      +....|.|..+||.+..+... +.+.+.|+...-.....+.+.|+|.+.- .+.|++.+.....     |..-.      
T Consensus        25 ~~~~~i~v~pvndpp~~~~~~~~~l~~~~~~~k~l~~~~l~~~d~d~~~~-~l~f~v~~t~~~~~~~~~~~~~g~~~~~F  103 (442)
T KOG3597|consen   25 TDVLRIHVNPVNDPPSLIFPSGSLLVILEGGQKVLDPELLTAADPDSAPL-PLEFQVLGTSSVPLPVLKFDVPGAPATEF  103 (442)
T ss_pred             EeeecccccccCCCcceeecccceEEeecCCceeccceEeeccCCCCCcc-ceEEEEccCCCCCCccceeeccCCcccce
Confidence            456779999999955555554 6688888876555566788999997543 3788888764322     33322      


Q ss_pred             -----cceEEEEceeCCcc--CCCeEEEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceecc-ceEEEEecCCCCCcEE
Q psy13120        129 -----VDGLLRVAQKLDRE--IKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSK-SYSASVPENISVGATV  200 (384)
Q Consensus       129 -----~~G~i~~~~~ld~e--~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~-~~~~~v~E~~~~g~~v  200 (384)
                           ..|.+.+    ++.  +.....++..++|+-.   .+. .+.....   ...|.+-.. .....+.-....--.-
T Consensus       104 s~~~v~~g~~~y----vh~g~el~~~~~~~~~SDg~~---~S~-~~i~~~~---~~~~~~~~~~~~gL~v~~gS~~~IT~  172 (442)
T KOG3597|consen  104 SYEEVEDGSLSY----VHSGTELRESELQLRVSDGLL---VSE-RAILKVE---ATGPAPHLARNTGLKVLQGSTAPITP  172 (442)
T ss_pred             EehHhhcCceeE----EecCcccccceEEEEeecceE---eee-eEEeccc---CCCcceeeecccceEEccCccccccH
Confidence                 1222222    222  2456788899999832   222 2212222   123333111 1123333332222222


Q ss_pred             EEEEEEeCCCCCCceEEEEEEeCCC
Q psy13120        201 LQVSATDLDDGINGRVRYTIISGDD  225 (384)
Q Consensus       201 ~~v~a~D~D~~~~~~i~y~i~~~~~  225 (384)
                      ..+.+.|.|.+....+.|.|.....
T Consensus       173 ~~L~ved~d~~~d~~v~~~i~~~P~  197 (442)
T KOG3597|consen  173 SNLSVEDNDSSPDDEVRYDITPPPQ  197 (442)
T ss_pred             hHceeecCCCCCCcEEEEEecCCCC
Confidence            3488889887667789999985443

>PF05345 He_PIG: Putative Ig domain; InterPro: IPR008009 This alignment represents the conserved core region of a ~90 residue repeat found in several haemagglutinins and other cell surface proteins

Probab=93.44  E-value=0.43  Score=30.46  Aligned_cols=45  Identities=29%  Similarity=0.465  Sum_probs=31.7

Q ss_pred             EEEEE---eCCCCCcEEEeCCCcEEEECccCCcC-CCcEEEEEEEEEeCCC
Q psy13120          6 EYSIV---SGDDEEIFTINPSNGTLSNLKHLDRE-TKSSYNLVVMATDMAK   52 (384)
Q Consensus         6 ~Y~i~---~~~~~~~F~id~~tG~i~~~~~lD~E-~~~~~~l~v~a~d~~~   52 (384)
                      +|++.   .+.-+.+..+|+.+|.|+-.-.  .. ....|.++|+|+|..|
T Consensus         1 Tys~~~~~~~~LP~gLs~d~~tG~isGtp~--~~~~~G~y~~~vtatd~~G   49 (49)
T PF05345_consen    1 TYSLTTPTGGGLPSGLSLDPSTGTISGTPT--SSVQPGTYTFTVTATDGSG   49 (49)
T ss_pred             CEEEEcCCCCCCCCcEEEeCCCCEEEeecC--CCccccEEEEEEEEEcCCC
Confidence            36763   2233468999999999986633  22 2358999999999764

Sequence similarities to Hyalin (IPR003410 from INTERPRO) and the PKD domain (IPR000601 from INTERPRO) suggest an Ig-like fold so this family may be similar in function to the (IPR003791 from INTERPRO) and (IPR003790 from INTERPRO) protein families.

>KOG3597|consensus

Probab=92.85  E-value=7.2  Score=37.42  Aligned_cols=153  Identities=14%  Similarity=0.070  Sum_probs=84.5

Q ss_pred             eeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCC----CCeEEECC----
Q psy13120        163 SRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDN----HDLTISED----  234 (384)
Q Consensus       163 ~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~----~~f~i~~~----  234 (384)
                      .+....|.|..+||.+..+....+.+.+.|+...-.....+.+.|+|... ..+.|++......    ..|.....    
T Consensus        24 ~~~~~~i~v~pvndpp~~~~~~~~~l~~~~~~~k~l~~~~l~~~d~d~~~-~~l~f~v~~t~~~~~~~~~~~~~g~~~~~  102 (442)
T KOG3597|consen   24 QTDVLRIHVNPVNDPPSLIFPSGSLLVILEGGQKVLDPELLTAADPDSAP-LPLEFQVLGTSSVPLPVLKFDVPGAPATE  102 (442)
T ss_pred             EEeeecccccccCCCcceeecccceEEeecCCceeccceEeeccCCCCCc-cceEEEEccCCCCCCccceeeccCCcccc
Confidence            45667899999999666565555568888887655555668888988753 3478888732111    11332221    


Q ss_pred             -------CcEEEEcccCCcc--ccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccC-CCeeEEEcCCCC
Q psy13120        235 -------NGLLRIAKNLNYE--RKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLH-SPYLALVNENTL  304 (384)
Q Consensus       235 -------~G~l~~~~~lD~e--~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~-~~~~~~v~e~~~  304 (384)
                             .|.+..    ++.  ......++..++|+-.-       +. .+.......   .|.+.. ......|.-+..
T Consensus       103 Fs~~~v~~g~~~y----vh~g~el~~~~~~~~~SDg~~~-------S~-~~i~~~~~~---~~~~~~~~~~gL~v~~gS~  167 (442)
T KOG3597|consen  103 FSYEEVEDGSLSY----VHSGTELRESELQLRVSDGLLV-------SE-RAILKVEAT---GPAPHLARNTGLKVLQGST  167 (442)
T ss_pred             eEehHhhcCceeE----EecCcccccceEEEEeecceEe-------ee-eEEecccCC---CcceeeecccceEEccCcc
Confidence                   222222    222  24567788888887542       11 222222222   333221 112233433332


Q ss_pred             CCCceEEEEEEEecCCCCCCCceEEEEEec
Q psy13120        305 PGPSFRIMTVQAHDADSLPFNGLVRYFLKD  334 (384)
Q Consensus       305 ~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~  334 (384)
                      .  -..-..+++.|.|..+ ...+.|.|..
T Consensus       168 ~--~IT~~~L~ved~d~~~-d~~v~~~i~~  194 (442)
T KOG3597|consen  168 A--PITPSNLSVEDNDSSP-DDEVRYDITP  194 (442)
T ss_pred             c--cccHhHceeecCCCCC-CcEEEEEecC
Confidence            1  1112358889998655 6789999886

>TIGR00845 caca sodium/calcium exchanger 1

Probab=92.40  E-value=17  Score=38.44  Aligned_cols=146  Identities=21%  Similarity=0.280  Sum_probs=78.0

Q ss_pred             ecCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCC---CCeeeeCcceEEEEc----------
Q psy13120         71 VNDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA---TPFSLGPVDGLLRVA----------  136 (384)
Q Consensus        71 vNd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~---~~F~i~~~~G~i~~~----------  136 (384)
                      .||.++.+... ....|.|+.  |+.-..+.-...|.+..-.+.|+..++.+   ..|.-  .+|.|...          
T Consensus       395 ~dd~~s~i~Fe~~~Y~V~En~--GtV~VtV~R~GGdl~~tVsVdY~T~DGTA~AG~DY~~--~sGTLtF~PGEt~KtItV  470 (928)
T TIGR00845       395 ENDPVSKIFFEPGHYTCLENC--GTVALTVVRRGGDLTNTVYVDYRTEDGTANAGSDYEF--TEGTLVFKPGETQKEFRI  470 (928)
T ss_pred             ccCCcceEEecCCeEEEeecC--cEEEEEEEEccCCCCceEEEEEEccCCccCCCCCccc--cCceEEECCCceEEEEEE
Confidence            44545566555 678899995  77666665544454444568898877732   12321  23444321          


Q ss_pred             eeCC---ccCCCeEEEEEEEEeCCC-------------CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEE
Q psy13120        137 QKLD---REIKSNYTLEIKAKDRGE-------------PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATV  200 (384)
Q Consensus       137 ~~ld---~e~~~~~~l~V~a~d~~~-------------~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v  200 (384)
                      .-+|   +|..+.|.+.+.--..+.             ..+......+|+|.| ||++|.|....-...|.|+.  |..-
T Consensus       471 ~IIDDdi~E~DE~F~V~LSNp~~g~~~G~~~~~~~~~~A~Lg~ps~ATVTIlD-DD~aGIfsFe~~~~sV~Es~--G~vt  547 (928)
T TIGR00845       471 GIIDDDIFEEDEHFYVRLSNLRVGSEDGILEANHVSAVAQLASPNTATVTILD-DDHAGIFTFEEDVFHVSESI--GIME  547 (928)
T ss_pred             EEccCCCCCCCceEEEEEeCCCCCCcccccccccccccceecCCceEEEEEec-CcccCcccccCceEEEEcCC--CEEE
Confidence            1122   455556665554322110             112233456677777 66788877666668899985  4443


Q ss_pred             EEEE-EEeCCCCCCceEEEEEEeCCC
Q psy13120        201 LQVS-ATDLDDGINGRVRYTIISGDD  225 (384)
Q Consensus       201 ~~v~-a~D~D~~~~~~i~y~i~~~~~  225 (384)
                      .+|. ..+.+  ..-.+.|....|..
T Consensus       548 vtV~RtsGa~--G~VtV~Y~T~dGTA  571 (928)
T TIGR00845       548 VKVLRTSGAR--GTVIVPYRTVEGTA  571 (928)
T ss_pred             EEEEEcCCCC--eeEEEEEEeecCcc
Confidence            3332 22221  12346677765543

This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family

>TIGR00845 caca sodium/calcium exchanger 1

Probab=90.89  E-value=24  Score=37.30  Aligned_cols=148  Identities=18%  Similarity=0.154  Sum_probs=75.7

Q ss_pred             CCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCC--CeEEECCCcEEEEccc--------
Q psy13120        174 ENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNH--DLTISEDNGLLRIAKN--------  243 (384)
Q Consensus       174 vnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~--~f~i~~~~G~l~~~~~--------  243 (384)
                      .||..+.+....-...|.|+.  |+.-.+|.-...|....-.+.|+...|....  -|.  +..|.|.....        
T Consensus       395 ~dd~~s~i~Fe~~~Y~V~En~--GtV~VtV~R~GGdl~~tVsVdY~T~DGTA~AG~DY~--~~sGTLtF~PGEt~KtItV  470 (928)
T TIGR00845       395 ENDPVSKIFFEPGHYTCLENC--GTVALTVVRRGGDLTNTVYVDYRTEDGTANAGSDYE--FTEGTLVFKPGETQKEFRI  470 (928)
T ss_pred             ccCCcceEEecCCeEEEeecC--cEEEEEEEEccCCCCceEEEEEEccCCccCCCCCcc--ccCceEEECCCceEEEEEE
Confidence            445455555555567899985  5665555544435444456889887664432  232  23455543211        


Q ss_pred             --CC---ccccCeEEEEEEEEECCCCC-----------cceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCC
Q psy13120        244 --LN---YERKAQYSLTIQAEDCGGDT-----------EERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGP  307 (384)
Q Consensus       244 --lD---~e~~~~~~l~V~a~D~~~~~-----------~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~  307 (384)
                        +|   +|....  |.|..++.....           ...........+|+|.| ||++|.|.-..-...|.|+.    
T Consensus       471 ~IIDDdi~E~DE~--F~V~LSNp~~g~~~G~~~~~~~~~~A~Lg~ps~ATVTIlD-DD~aGIfsFe~~~~sV~Es~----  543 (928)
T TIGR00845       471 GIIDDDIFEEDEH--FYVRLSNLRVGSEDGILEANHVSAVAQLASPNTATVTILD-DDHAGIFTFEEDVFHVSESI----  543 (928)
T ss_pred             EEccCCCCCCCce--EEEEEeCCCCCCcccccccccccccceecCCceEEEEEec-CcccCcccccCceEEEEcCC----
Confidence              11   233333  444444322110           00001122455666677 67899887666677889986    


Q ss_pred             ceEEEEEEEecCCCCCCCceEEEEEec
Q psy13120        308 SFRIMTVQAHDADSLPFNGLVRYFLKD  334 (384)
Q Consensus       308 g~~i~~v~a~D~D~~~~~~~i~y~l~~  334 (384)
                      |....+|.-+-.-.+  .-.+.|...+
T Consensus       544 G~vtvtV~RtsGa~G--~VtV~Y~T~d  568 (928)
T TIGR00845       544 GIMEVKVLRTSGARG--TVIVPYRTVE  568 (928)
T ss_pred             CEEEEEEEEcCCCCe--eEEEEEEeec
Confidence            444444433321111  2346677665

This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family

>PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators

Probab=88.96  E-value=4.9  Score=27.06  Aligned_cols=60  Identities=22%  Similarity=0.293  Sum_probs=35.5

Q ss_pred             CCceEEEEEEcCCCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCCCCCceeEEEEEEe
Q psy13120        108 QNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRL  171 (384)
Q Consensus       108 ~~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V  171 (384)
                      .+-...|.|.+.+..+..+...+-.+...    .-..+.|+|.|+|.|..+.......++.|.|
T Consensus         6 ~~~~Y~Y~l~g~d~~W~~~~~~~~~~~~~----~L~~G~Y~l~V~a~~~~~~~~~~~~~l~i~I   65 (66)
T PF07495_consen    6 ENIRYRYRLEGFDDEWITLGSYSNSISYT----NLPPGKYTLEVRAKDNNGKWSSDEKSLTITI   65 (66)
T ss_dssp             TTEEEEEEEETTESSEEEESSTS-EEEEE----S--SEEEEEEEEEEETTS-B-SS-EEEEEEE
T ss_pred             CceEEEEEEECCCCeEEECCCCcEEEEEE----eCCCEEEEEEEEEECCCCCcCcccEEEEEEE
Confidence            34457788887766666665432244433    2246899999999997664444446666665

However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.

>TIGR00864 PCC polycystin cation channel protein

Probab=84.55  E-value=98  Score=37.02  Aligned_cols=31  Identities=10%  Similarity=0.247  Sum_probs=22.3

Q ss_pred             CccCCCeEEEEEEEEeCCCCCCceeEEEEEEecc
Q psy13120        140 DREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLD  173 (384)
Q Consensus       140 d~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~d  173 (384)
                      .|.....|++++.|++..+.   ...++.|.|.+
T Consensus      1563 TY~spGtYtVtLTvtN~~Gs---~~~T~~i~V~~ 1593 (2740)
T TIGR00864      1563 TFRSVGTFNIIVTAENDVGA---AQASIFLFVLQ 1593 (2740)
T ss_pred             eecCCceEEEEEEEecCCCc---cceeEEEEEee
Confidence            36778999999999998652   34555666654

Note: this model has been restricted to the amino half because for technical reasons.

>TIGR03660 T1SS_rpt_143 T1SS-143 repeat domain

Probab=84.31  E-value=19  Score=28.62  Aligned_cols=65  Identities=26%  Similarity=0.490  Sum_probs=44.4

Q ss_pred             cEEE--eCCCcE--EEECccCCcCC---CcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccCceeEeeCC
Q psy13120         17 IFTI--NPSNGT--LSNLKHLDRET---KSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITANETTIPEN   89 (384)
Q Consensus        17 ~F~i--d~~tG~--i~~~~~lD~E~---~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~v~E~   89 (384)
                      .|+|  + ..|.  +.+..+||+..   .-...|.|.|+|..|..     ....+.|+|.|  | .|........+|.|+
T Consensus        57 Vftvtl~-~~GsYtftL~~~lDH~~g~d~l~l~~~v~a~D~DGD~-----s~~~l~VtI~D--D-~P~~~~~~~~~V~E~  127 (137)
T TIGR03660        57 VFTLTLN-ADGSYEFTLEGPLDHAAGSDELTLNFPIIATDFDGDT-----SSITLPVTIVD--D-VPTITDVDALTVDED  127 (137)
T ss_pred             EEEEEEC-CCccEEEEEcccccCCCCCceEEEeeeEEEEeCCCCc-----cccEEEEEEEC--C-CCeeccccceEEecc
Confidence            4555  3 2564  44568898854   33578889999988752     34578888877  6 688766656788886


Q ss_pred             C
Q psy13120         90 S   90 (384)
Q Consensus        90 ~   90 (384)
                      .
T Consensus       128 ~  128 (137)
T TIGR03660       128 D  128 (137)
T ss_pred             c
Confidence            4

This model represents a domain of about 143 amino acids that may occur singly or in up to 23 tandem repeats in very large proteins in the genus Vibrio, and in related species such as Legionella pneumophila, Photobacterium profundum, Rhodopseudomonas palustris, Shewanella pealeana, and Aeromonas hydrophila. Proteins with these domains represent a subset of a broader set of proteins with a particular signal for type 1 secretion, consisting of several glycine-rich repeats modeled by pfam00353, followed by a C-terminal domain modeled by TIGR03661. Proteins with this domain tend to share several properties with the RtxA (Repeats in Toxin) protein of Vibrio cholerae, including a large size often containing tandemly repeated domains and a C-terminal signal for type 1 secretion.

>TIGR00864 PCC polycystin cation channel protein

Probab=83.80  E-value=1.1e+02  Score=36.78  Aligned_cols=204  Identities=14%  Similarity=0.145  Sum_probs=94.8

Q ss_pred             cCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccC-c---eeEeeC----CCCCCcEEEEEEEEeCCC
Q psy13120         35 RETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITA-N---ETTIPE----NSPLNTVVAALKAIDRDE  106 (384)
Q Consensus        35 ~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~-~---~~~v~E----~~~~gt~v~~~~a~D~D~  106 (384)
                      |.....|++++.|++..|      +...++.|.|.+....- .+... .   ...+.|    ..+.+ ....+.+.-.| 
T Consensus      1564 Y~spGtYtVtLTvtN~~G------s~~~T~~i~V~~~I~Gl-qI~~~~~~gg~~~~~~~~~~~~~t~-~~v~l~~~~~~- 1634 (2740)
T TIGR00864      1564 FRSVGTFNIIVTAENDVG------AAQASIFLFVLQEIEGL-QILGETAEGGGGGVQELDGCYFETN-HTVQFHAGFKD- 1634 (2740)
T ss_pred             ecCCceEEEEEEEecCCC------ccceeEEEEEeecccce-EEEeecccccCCcccccccceeccC-CEEEeeeccCC-
Confidence            455678999999999887      44566677776532210 00000 0   000000    01111 12345554333 


Q ss_pred             CCCceEEEEEEc--CC--CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCCCCCceeEEEEEEeccCCCCCCcee
Q psy13120        107 GQNSYVEYSIIN--SE--ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFD  182 (384)
Q Consensus       107 ~~~~~~~y~l~~--~~--~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~  182 (384)
                      |.+  ++|+..-  ..  ++...  ..+|.-.   .+-+.+...|.+++.|++.-+   ...+.-++.|.+-   .+.+ 
T Consensus      1635 GTn--vsysW~~~~~n~~dg~~~--~~tGk~~---~vt~~~pG~Y~VtL~aSN~vG---~~t~s~~i~v~ep---i~~L- 1700 (2740)
T TIGR00864      1635 GTN--LSFSWNAILDNEPDGPAF--AGSGKGA---KLNPLEAGPCDIFLQAANLLG---QATADCTIDFLEP---AGNL- 1700 (2740)
T ss_pred             CCe--eEEEEEEecCCCCCCccc--cccCcee---EEecCCCceEEEEEEEeeccc---ceeeEEEEEEEEE---cCce-
Confidence            344  4554422  11  11111  1234321   234567799999999999743   2233333444321   1111 


Q ss_pred             ccceEEEEecCCC-CCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEEC
Q psy13120        183 SKSYSASVPENIS-VGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDC  261 (384)
Q Consensus       183 ~~~~~~~v~E~~~-~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~  261 (384)
                          .+.+..+.. +|..| .+.+.-..   +..++|++.-++...+..=++     +.  ...|.....|.++|+|.+.
T Consensus      1701 ----~L~aS~~~aavn~~V-~fs~~lt~---GS~vty~W~~gdG~s~~~s~p-----~~--tHtf~~~G~y~VtVta~N~ 1765 (2740)
T TIGR00864      1701 ----MLQASDNPAAVNALI-NLSAELAE---GSGLQYRWFLEEGDDLETSEP-----FM--SHSFPSAGLHLVTMKAFNE 1765 (2740)
T ss_pred             ----EEeccCCcccCCCeE-EEEEEecC---CCCcEEEEEECCCCCcccCCC-----ce--EEEccCCceEEEEEEEEcc
Confidence                112222211 23333 34442222   344666655343322110000     01  1236678899999999998


Q ss_pred             CCCCcceeeeeEEEEEEEEeec
Q psy13120        262 GGDTEERIRFDTATVSILVSDI  283 (384)
Q Consensus       262 ~~~~~~~~~~~~~~v~i~V~dv  283 (384)
                      .+..       ..++.|.|.+.
T Consensus      1766 vss~-------~~s~~V~Vqep 1780 (2740)
T TIGR00864      1766 LGSA-------NASEEVDVQEP 1780 (2740)
T ss_pred             cccc-------ceeEEEEEEec
Confidence            7643       45677777544

Note: this model has been restricted to the amino half because for technical reasons.

>TIGR03660 T1SS_rpt_143 T1SS-143 repeat domain

Probab=82.07  E-value=7.5  Score=30.91  Aligned_cols=47  Identities=30%  Similarity=0.487  Sum_probs=33.1

Q ss_pred             cCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCC
Q psy13120        249 KAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLP  305 (384)
Q Consensus       249 ~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~  305 (384)
                      .-.+.|.|.|+|..+..      ....+.|+|.|  | .|+..... ...|.|+..+
T Consensus        84 ~l~l~~~v~a~D~DGD~------s~~~l~VtI~D--D-~P~~~~~~-~~~V~E~~L~  130 (137)
T TIGR03660        84 ELTLNFPIIATDFDGDT------SSITLPVTIVD--D-VPTITDVD-ALTVDEDDLP  130 (137)
T ss_pred             eEEEeeeEEEEeCCCCc------cccEEEEEEEC--C-CCeecccc-ceEEeccccc
Confidence            34678889999988764      34588888877  5 68766443 4688886654

This model represents a domain of about 143 amino acids that may occur singly or in up to 23 tandem repeats in very large proteins in the genus Vibrio, and in related species such as Legionella pneumophila, Photobacterium profundum, Rhodopseudomonas palustris, Shewanella pealeana, and Aeromonas hydrophila. Proteins with these domains represent a subset of a broader set of proteins with a particular signal for type 1 secretion, consisting of several glycine-rich repeats modeled by pfam00353, followed by a C-terminal domain modeled by TIGR03661. Proteins with this domain tend to share several properties with the RtxA (Repeats in Toxin) protein of Vibrio cholerae, including a large size often containing tandemly repeated domains and a C-terminal signal for type 1 secretion.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	384
2a62_A	322	Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length		1e-32
2a62_A	322	Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length		1e-17
2a62_A	322	Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length		1e-10
3q2w_A	559	Crystal Structure Of Mouse N-Cadherin Ectodomain Le		2e-23
3q2w_A	559	Crystal Structure Of Mouse N-Cadherin Ectodomain Le		7e-12
3q2v_A	550	Crystal Structure Of Mouse E-Cadherin Ectodomain Le		5e-20
1q55_A	880	W-Shaped Trans Interactions Of Cadherins Model Base		2e-18
1q55_A	880	W-Shaped Trans Interactions Of Cadherins Model Base		1e-16
1q55_A	880	W-Shaped Trans Interactions Of Cadherins Model Base		1e-07
1l3w_A	546	C-Cadherin Ectodomain Length = 546		2e-18
1l3w_A	546	C-Cadherin Ectodomain Length = 546		5e-17
1l3w_A	546	C-Cadherin Ectodomain Length = 546		6e-08
1edh_A	226	E-Cadherin Domains 1 And 2 In Complex With Calcium		1e-17
1edh_A	226	E-Cadherin Domains 1 And 2 In Complex With Calcium		4e-09
3lnd_A	207	Crystal Structure Of Cadherin-6 Ec12 W4a Length = 2		1e-17
3lnd_A	207	Crystal Structure Of Cadherin-6 Ec12 W4a Length = 2		5e-06
3mvs_A	210	Structure Of The N-Terminus Of Cadherin 23 Length =		3e-17
3mvs_A	210	Structure Of The N-Terminus Of Cadherin 23 Length =		4e-09
3ubh_A	419	Crystal Structure Of Drosophila N-Cadherin Ec1-4 Le		4e-17
4aqe_A	214	Crystal Structure Of Deafness Associated Mutant Mou		9e-17
4aqe_A	214	Crystal Structure Of Deafness Associated Mutant Mou		3e-09
1ncj_A	215	N-Cadherin, Two-Domain Fragment Length = 215		1e-16
1ncj_A	215	N-Cadherin, Two-Domain Fragment Length = 215		4e-12
2wcp_A	214	Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length		1e-16
2wcp_A	214	Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length		4e-09
2qvi_A	215	Crystal Structure Of N-Cadherin Domains Ec12 Length		1e-16
2qvi_A	215	Crystal Structure Of N-Cadherin Domains Ec12 Length		5e-12
2a4e_A	215	Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length		5e-16
2a4e_A	215	Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length		3e-09
2wd0_A	214	Crystal Structure Of Nonsyndromic Deafness (Dfnb12)		5e-16
2wd0_A	214	Crystal Structure Of Nonsyndromic Deafness (Dfnb12)		2e-08
1ff5_A	219	Structure Of E-Cadherin Double Domain Length = 219		1e-15
1ff5_A	219	Structure Of E-Cadherin Double Domain Length = 219		4e-09
3ppe_A	203	Crystal Structure Of Chicken Ve-Cadherin Ec1-2 Leng		2e-14
3lni_A	213	Crystal Structure Of E-Cadherin Ec12 E89a Length =		7e-14
3lni_A	213	Crystal Structure Of E-Cadherin Ec12 E89a Length =		2e-08
3ubf_A	316	Crystal Structure Of Drosophila N-Cadherin Ec1-3, I		9e-14
3q2l_A	213	Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213		9e-14
3q2l_A	213	Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213		2e-09
3lne_A	213	Crystal Structure Of E-Cadherin Ec12 K14e Length =		1e-13
3lne_A	213	Crystal Structure Of E-Cadherin Ec12 K14e Length =		5e-09
3lng_A	215	Crystal Structure Of E-Cadherin Ec12 Aa Extension L		1e-13
3lng_A	215	Crystal Structure Of E-Cadherin Ec12 Aa Extension L		4e-09
3lnf_A	213	Crystal Structure Of E-Cadherin Ec12 K14ew2a Length		1e-13
3lnf_A	213	Crystal Structure Of E-Cadherin Ec12 K14ew2a Length		4e-09
1q1p_A	212	E-Cadherin Activation Length = 212		1e-13
1q1p_A	212	E-Cadherin Activation Length = 212		5e-09
2qvf_B	213	Mouse E-cadherin Domains 1,2 Length = 213		1e-13
2qvf_B	213	Mouse E-cadherin Domains 1,2 Length = 213		5e-09
3lnh_A	213	Crystal Structure Of E-Cadherin Ec12 W2a Length = 2		1e-13
3lnh_A	213	Crystal Structure Of E-Cadherin Ec12 W2a Length = 2		4e-09
3qrb_A	213	Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Lengt		1e-13
3qrb_A	213	Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Lengt		4e-09
3q2n_A	213	Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213		1e-13
3q2n_A	213	Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213		4e-08
2o72_A	213	Crystal Structure Analysis Of Human E-Cadherin (1-2		2e-13
2o72_A	213	Crystal Structure Analysis Of Human E-Cadherin (1-2		2e-09
2yst_A	119	Solution Structure Of The Third Cadherin Domain Fro		5e-11
3k5s_A	217	Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Len		2e-10
3k5s_A	217	Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Len		6e-06
2ee0_A	114	Solution Structures Of The Ca Domain Of Human Proto		7e-10
2ee0_A	114	Solution Structures Of The Ca Domain Of Human Proto		3e-04
3k5r_A	218	Crystal Structure Of Mouse T-Cadherin Ec1 Ec2 Lengt		7e-09
4apx_B	242	Crystal Structure Of Mouse Cadherin-23 Ec1-2 And Pr		1e-08
1suh_A	146	Amino-Terminal Domain Of Epithelial Cadherin In The		3e-08
1suh_A	146	Amino-Terminal Domain Of Epithelial Cadherin In The		4e-05
1zxk_A	98	Crystal Structure Of Cadherin8 Ec1 Domain Length =		4e-05
1nch_A	110	Structural Basis Of Cell-Cell Adhesion By Cadherins		3e-04

>pdb|2A62|A Chain A, Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length = 322

Iteration: 1
 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/293 (36%), Positives = 154/293 (52%), Gaps = 21/293 (7%)
Query: 4   RLEYSIVSGDDE-EIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTT 62
           +++Y I+SGD    IF IN   G +  +K LDRE K+ Y L   A D      K L   +
Sbjct: 34  KIKY-ILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET--NKPLEPPS 90
Query: 63  QVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDE---GQNSYVEYSIIN 118
           +  I ++D+NDNAPEF+      T+PE S L T V  + A D D+   G ++ + YSI+ 
Sbjct: 91  EFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSIL- 149
Query: 119 SEATP-FSLGPVDGLLRVA-QKLDREIKSNYTLEIKAKDRGEPSK--SSRTKFFIRLLDE 174
            E  P FS+ P   +++ A   +DRE K  Y + I+AKD G  S   S  T   + L D 
Sbjct: 150 -EGQPYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDV 208
Query: 175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISED 234
           NDN P F    Y  SVPE++ +G  + +V A D D G N +  Y II GD      I+ D
Sbjct: 209 NDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSD 268
Query: 235 ----NGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRF---DTATVSILV 280
               +G++R+ K L++E K  Y+L ++A +   D     R    DTATV I+V
Sbjct: 269 AQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRFSSRGPFKDTATVKIVV 321

>pdb|2A62|A Chain A, Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length = 322

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 29/271 (10%)
Query: 121 ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSK--SSRTKFFIRLLDENDNN 178
            T F +  + G +   ++LDRE K+ YTL  +A D  E +K     ++F I++ D NDN 
Sbjct: 45  GTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDF-ETNKPLEPPSEFIIKVQDINDNA 103
Query: 179 PIFDSKSYSASVPENISVGATVLQVSATDLDDGING---RVRYTIISGDDNHDLTISEDN 235
           P F +  Y A+VPE   +G +V  V+ATD DD + G   ++ Y+I+ G      +I  + 
Sbjct: 104 PEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPY--FSIEPET 161
Query: 236 GLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSP 294
            +++ A  N++ E K +Y + IQA+D GG +       T T+++ ++D+NDN P F  S 
Sbjct: 162 AIIKTALPNMDREAKEEYLVVIQAKDMGGHSGG--LSGTTTLTVTLTDVNDNPPKFAQSL 219
Query: 295 YLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDXXXXXXXXXXXXXXXDLFRV 354
           Y   V E+ + G +  I  V+A+D D +  N    Y + D                LF +
Sbjct: 220 YHFSVPEDVVLGTA--IGRVKANDQD-IGENAQSSYDIIDGDGTA-----------LFEI 265
Query: 355 NSTT----GDIYLLKSLDREKQAEYLLTLQA 381
            S      G I L K LD E +  Y L ++A
Sbjct: 266 TSDAQAQDGVIRLRKPLDFETKKSYTLKVEA 296

>pdb|2A62|A Chain A, Crystal Structure Of Mouse Cadherin-8 Ec1-3 Length = 322

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 98/201 (48%), Gaps = 33/201 (16%)
Query: 189 SVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDL-TISEDNGLLRIAKNLNYE 247
           S PE I VG        TDLD G + +++Y I+SGD    +  I++  G +   K L+ E
Sbjct: 14  SGPEPILVGRL-----HTDLDPG-SKKIKY-ILSGDGAGTIFQINDITGDIHAIKRLDRE 66
Query: 248 RKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGP 307
            KA+Y+LT QA D   +T + +   +  + I V DINDN P FL+ PY A V E ++ G 
Sbjct: 67  EKAEYTLTAQAVDF--ETNKPLEPPSEFI-IKVQDINDNAPEFLNGPYHATVPEMSILGT 123
Query: 308 SFRIMTVQAHDADSLPFNG----LVRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGDIY- 362
           S  +  V A DAD  P  G    LV   L+                  F +   T  I  
Sbjct: 124 S--VTNVTATDADD-PVYGNSAKLVYSILEGQP--------------YFSIEPETAIIKT 166
Query: 363 LLKSLDREKQAEYLLTLQAMD 383
            L ++DRE + EYL+ +QA D
Sbjct: 167 ALPNMDREAKEEYLVVIQAKD 187

>pdb|3Q2W|A Chain A, Crystal Structure Of Mouse N-Cadherin Ectodomain Length = 559

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 176/393 (44%), Gaps = 44/393 (11%)
Query: 2   NGRLEYSIVS-GDDEE---IFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKR 57
           N  L YS+   G D+    IF INP +G LS  K LDRE  + ++L   A D+      +
Sbjct: 31  NLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDING---NQ 87
Query: 58  LSSTTQVSIVIRDVNDNAPEFI-TANETTIPENSPLNTVVAALKAIDRDE--GQNSYVEY 114
           + +   + I + D+NDN PEF+      ++PE S   T V  + AID D+    N  + Y
Sbjct: 88  VENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRY 147
Query: 115 SIIN-SEATP----FSLGPVDG-LLRVAQKLDREIKSNYTLEIKAKD-RGEPSK--SSRT 165
            I++ + +TP    F++    G ++ VA  LDRE    YTL I+A D  G P+   S+  
Sbjct: 148 RILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTA 207
Query: 166 KFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGIN--GRVRYTIISG 223
              I + D NDN P F + ++   VPEN  V   V  ++ TD D          Y I  G
Sbjct: 208 TAVITVTDVNDNPPEFTAMTFYGEVPEN-RVDVIVANLTVTDKDQPHTPAWNAAYRISGG 266
Query: 224 DDNHDLTISED----NGLLRIAKNLNYERKAQYSLTIQAEDCGGDTE--ERIRFDTATVS 277
           D      I  D    +GL+ + K +++E    + LT+ AE+     +  +     TATVS
Sbjct: 267 DPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVS 326
Query: 278 ILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDXXX 337
           + V D+N+N P F  +P +    E    G     +T Q  D          RY  ++   
Sbjct: 327 VTVIDVNEN-PYFAPNPKIIRQEEGLHAGTMLTTLTAQDPD----------RYMQQN--- 372
Query: 338 XXXXXXXXXXXXDLFRVNSTTGDIYLLKSLDRE 370
                       +  +++   G I  +  LDRE
Sbjct: 373 --IRYTKLSDPANWLKIDPVNGQITTIAVLDRE 403

>pdb|3Q2W|A Chain A, Crystal Structure Of Mouse N-Cadherin Ectodomain Length = 559

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I+  +G L + K L+ E  A++ L   A D  G+  E    +   + I V D+NDN P F
Sbjct: 53  INPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVE----NPIDIVINVIDMNDNRPEF 108
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADSL-PFNGLVRYFLKDXXXXXXXXXXXXXXX 349
           LH  +   V E + PG    +MTV A DAD     NG++RY +                 
Sbjct: 109 LHQVWNGSVPEGSKPG--TYVMTVTAIDADDPNALNGMLRYRI-------LSQAPSTPSP 159
Query: 350 DLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
           ++F +N+ TGDI  + + LDREK  +Y L +QA D
Sbjct: 160 NMFTINNETGDIITVAAGLDREKVQQYTLIIQATD 194

>pdb|3Q2V|A Chain A, Crystal Structure Of Mouse E-Cadherin Ectodomain Length = 550

Iteration: 1
 Score = 94.4 bits (233), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 175/388 (45%), Gaps = 43/388 (11%)
Query: 17  IFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAP 76
           +F I    G L   + LDRE  + Y L   A        + +    ++ I + D NDN P
Sbjct: 50  VFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNG---EAVEDPMEIVITVTDQNDNRP 106
Query: 77  EFIT-ANETTIPENSPLNTVVAALKAIDRDEGQNSY---VEYSIINSEA-----TPFSLG 127
           EF     E ++ E +   T V  + A D D+  N+Y   + Y+I++ +        F++ 
Sbjct: 107 EFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVN 166
Query: 128 PVDGLLRV-AQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSY 186
              G++ V    LDRE    YTL ++A D      S+  K  I + D NDN P+F+  +Y
Sbjct: 167 RDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTY 226
Query: 187 SASVPENISVGATVLQVSATDLDDGIN---GRVRYTIISGDDNHDLTISE---DNGLLRI 240
              VPEN  V A +  +  TD DD  N    +  YT+++  D   + +++   ++G+L+ 
Sbjct: 227 QGQVPEN-EVNARIATLKVTD-DDAPNTPAWKAVYTVVNDPDQQFVVVTDPTTNDGILKT 284
Query: 241 AKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVN 300
           AK L++E K QY L ++ E+     E  +   TATV++ V D+N+  P+F+ +     V 
Sbjct: 285 AKGLDFEAKQQYILHVRVEN-EEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVP 342
Query: 301 ENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGD 360
           E+   G    I +  A + D+     +     +D               +   +N  TG 
Sbjct: 343 EDF--GVGQEITSYTAREPDTFMDQKITYRIWRD-------------TANWLEINPETGA 387
Query: 361 IYLLKSLDRE-----KQAEYLLTLQAMD 383
           I+    +DRE     K + Y+  + A D
Sbjct: 388 IFTRAEMDREDAEHVKNSTYVALIIATD 415

>pdb|1Q55|A Chain A, W-Shaped Trans Interactions Of Cadherins Model Based On Fitting C- Cadherin (1l3w) To 3d Map Of Desmosomes Obtained By Electron Tomography Length = 880

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 127/277 (45%), Gaps = 23/277 (8%)
Query: 4   RLEYSIVS-GDD---EEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLS 59
           ++ YSI   G D   + +F I    G +   + LDRE    Y L   A      P   + 
Sbjct: 188 KVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSP---VE 244
Query: 60  STTQVSIVIRDVNDNAPEFIT-ANETTIPENSPLNTVVAALKAIDRD---EGQNSYVEYS 115
              +++I + D NDN P+F       ++ E     T V A+ A D D   +  N  + YS
Sbjct: 245 EPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYS 304
Query: 116 IINS---EATP--FSLGPVDGLLR-VAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFI 169
           I+     E  P  F++    G++  +   LDRE    YTL ++A D      S   K  I
Sbjct: 305 ILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAII 364
Query: 170 RLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLD-DGINGRVRYTIISGDDNHD 228
           ++ D NDN PIFD K+Y+A VPEN  +G  V ++S TDLD  G         I  ++   
Sbjct: 365 QITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGF 423
Query: 229 LTISED----NGLLRIAKNLNYERKAQYSLTIQAEDC 261
             I+ D     G+L  AK L++E + QY L I  E+ 
Sbjct: 424 FNITTDPESNQGILTTAKGLDFELRKQYVLQITVENA 460

>pdb|1Q55|A Chain A, W-Shaped Trans Interactions Of Cadherins Model Based On Fitting C- Cadherin (1l3w) To 3d Map Of Desmosomes Obtained By Electron Tomography Length = 880

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 155/342 (45%), Gaps = 38/342 (11%)
Query: 2   NGRLEYSIVSGDDEE----IFTINPSNGTLSNL-KHLDRETKSSYNLVVMATDMAKPPQK 56
           NG L YSI+  D EE    +FTIN   G +S +   LDRE    Y L V ATD+      
Sbjct: 298 NGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEG---A 354
Query: 57  RLSSTTQVSIVIRDVNDNAPEFITANETT-IPENSPLNTVVAALKAIDRD-EGQNSY-VE 113
            LS   +  I I D NDNAP F     T  +PEN  +   V  L   D D  G  ++   
Sbjct: 355 GLSVEGKAIIQITDANDNAPIFDPKTYTALVPENE-IGFEVQRLSVTDLDMPGTPAWQAV 413
Query: 114 YSIINSEATPFSLG----PVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSK---SSRTK 166
           Y I  +E   F++        G+L  A+ LD E++  Y L+I  ++  EP      + T 
Sbjct: 414 YKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVEN-AEPFSVPLPTSTA 472
Query: 167 FFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDN 226
                +++ +  P F        V E++S G  ++ + A D D     ++ Y  I  D  
Sbjct: 473 TVTVTVEDVNEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSY-FIGNDPA 531
Query: 227 HDLTISEDNGLLRIAKNLN----YERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
             LT+++DNG++    NL+    Y +   Y++ +   D G      +   T T+ + V D
Sbjct: 532 RWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDG----VSVGTGTGTLILHVLD 587
Query: 283 INDNYPVFLHSP-YLALVNENTLPGPSFRIMTVQAHDADSLP 323
           +NDN PV   SP    + ++N    P  +++T+   DAD  P
Sbjct: 588 VNDNGPV--PSPRVFTMCDQN----PEPQVLTIS--DADIPP 621

>pdb|1Q55|A Chain A, W-Shaped Trans Interactions Of Cadherins Model Based On Fitting C- Cadherin (1l3w) To 3d Map Of Desmosomes Obtained By Electron Tomography Length = 880

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 22/177 (12%)
Query: 215 RVRYTIIS-GDDNHD---LTISEDNGLLRIAKNLNYERKAQYSLTIQA-EDCGGDTEERI 269
           +V Y+I   G DN       I  + G + + + L+ E   +Y L+  A  + G   EE +
Sbjct: 188 KVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPM 247
Query: 270 RFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSL--PFNGL 327
                 ++I V D NDN P F    +   V E   PG   ++M V A D D      NG+
Sbjct: 248 E-----ITINVIDQNDNRPKFTQDVFRGSVREGVQPG--TQVMAVSATDEDDNIDSLNGV 300
Query: 328 VRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
           + Y +                 +LF +N  TG I L+ + LDREK  EY LT+QA D
Sbjct: 301 LSYSI-------LKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATD 350

>pdb|1L3W|A Chain A, C-Cadherin Ectodomain Length = 546

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 127/277 (45%), Gaps = 23/277 (8%)
Query: 4   RLEYSIVS-GDD---EEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLS 59
           ++ YSI   G D   + +F I    G +   + LDRE    Y L   A      P   + 
Sbjct: 39  KVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSP---VE 95
Query: 60  STTQVSIVIRDVNDNAPEFIT-ANETTIPENSPLNTVVAALKAIDRD---EGQNSYVEYS 115
              +++I + D NDN P+F       ++ E     T V A+ A D D   +  N  + YS
Sbjct: 96  EPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYS 155
Query: 116 IINS---EATP--FSLGPVDGLLR-VAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFI 169
           I+     E  P  F++    G++  +   LDRE    YTL ++A D      S   K  I
Sbjct: 156 ILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAII 215
Query: 170 RLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLD-DGINGRVRYTIISGDDNHD 228
           ++ D NDN PIFD K+Y+A VPEN  +G  V ++S TDLD  G         I  ++   
Sbjct: 216 QITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGF 274
Query: 229 LTISED----NGLLRIAKNLNYERKAQYSLTIQAEDC 261
             I+ D     G+L  AK L++E + QY L I  E+ 
Sbjct: 275 FNITTDPESNQGILTTAKGLDFELRKQYVLQITVENA 311

>pdb|1L3W|A Chain A, C-Cadherin Ectodomain Length = 546

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 152/341 (44%), Gaps = 36/341 (10%)
Query: 2   NGRLEYSIVSGDDEE----IFTINPSNGTLSNL-KHLDRETKSSYNLVVMATDMAKPPQK 56
           NG L YSI+  D EE    +FTIN   G +S +   LDRE    Y L V ATD+      
Sbjct: 149 NGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEG---A 205
Query: 57  RLSSTTQVSIVIRDVNDNAPEFITANETT-IPENSPLNTVVAALKAIDRD-EGQNSY-VE 113
            LS   +  I I D NDNAP F     T  +PEN  +   V  L   D D  G  ++   
Sbjct: 206 GLSVEGKAIIQITDANDNAPIFDPKTYTALVPENE-IGFEVQRLSVTDLDMPGTPAWQAV 264
Query: 114 YSIINSEATPFSLG----PVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFI 169
           Y I  +E   F++        G+L  A+ LD E++  Y L+I  ++    S    T    
Sbjct: 265 YKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTAT 324
Query: 170 RLLDENDNN--PIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNH 227
             +   D N  P F        V E++S G  ++ + A D D     ++ Y  I  D   
Sbjct: 325 VTVTVEDVNEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSY-FIGNDPAR 383
Query: 228 DLTISEDNGLLRIAKNLN----YERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDI 283
            LT+++DNG++    NL+    Y +   Y++ +   D G      +   T T+ + V D+
Sbjct: 384 WLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDG----VSVGTGTGTLILHVLDV 439
Query: 284 NDNYPVFLHSP-YLALVNENTLPGPSFRIMTVQAHDADSLP 323
           NDN PV   SP    + ++N    P  +++T+   DAD  P
Sbjct: 440 NDNGPV--PSPRVFTMCDQN----PEPQVLTI--SDADIPP 472

>pdb|1L3W|A Chain A, C-Cadherin Ectodomain Length = 546

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 26/179 (14%)
Query: 215 RVRYTIIS-GDDNHD---LTISEDNGLLRIAKNLNYERKAQYSLTIQA-EDCGGDTEERI 269
           +V Y+I   G DN       I  + G + + + L+ E   +Y L+  A  + G   EE +
Sbjct: 39  KVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPM 98
Query: 270 RFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDA----DSLPFN 325
                 ++I V D NDN P F    +   V E   PG   ++M V A D     DSL  N
Sbjct: 99  E-----ITINVIDQNDNRPKFTQDVFRGSVREGVQPG--TQVMAVSATDEDDNIDSL--N 149
Query: 326 GLVRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
           G++ Y +                 +LF +N  TG I L+ + LDREK  EY LT+QA D
Sbjct: 150 GVLSYSI-------LKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATD 201

>pdb|1EDH|A Chain A, E-Cadherin Domains 1 And 2 In Complex With Calcium Length = 226

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 83/168 (49%), Gaps = 12/168 (7%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 60  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 119
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 120 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTS 179
Query: 243 NLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
            L+ E    Y+L +QA D  G+        TA   I V DINDN PVF
Sbjct: 180 GLDRESYPTYTLVVQAADLQGEGLST----TAKAVITVKDINDNAPVF 223

>pdb|1EDH|A Chain A, E-Cadherin Domains 1 And 2 In Complex With Calcium Length = 226

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 229 LTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYP 288
             I  + G L++ + L+ E  A+Y L   A    G+  E    D   + I V+D NDN P
Sbjct: 53  FIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVE----DPMEIVITVTDQNDNRP 108
Query: 289 VFLHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXX 346
            F    +   V E  +PG S  +M V A DAD     +N  + Y +              
Sbjct: 109 EFTQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPEL 159
Query: 347 XXXDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
              ++F VN  TG I +L S LDRE    Y L +QA D
Sbjct: 160 PHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 197

>pdb|3LND|A Chain A, Crystal Structure Of Cadherin-6 Ec12 W4a Length = 207

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDR--GEPSKSSRTKFFIRLLDENDNNPIFDSKSYSA 188
           G ++  ++LDRE K  Y L  +A +R  G P +   ++F I++ D NDN PIF    Y+A
Sbjct: 55  GDIQATKRLDREEKPVYILRAQAVNRRTGRPVEP-ESEFIIKIHDINDNEPIFTKDVYTA 113
Query: 189 SVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISEDNGLLRIA-KNL 244
           +VPE   VG  V+QV+ATD DD   G + +V Y+I+ G      ++  + G+++ A  N+
Sbjct: 114 TVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPY--FSVESETGIIKTALLNM 171
Query: 245 NYERKAQYSLTIQAEDCGG 263
           + E + QY + IQA+D GG
Sbjct: 172 DRENREQYQVVIQAKDMGG 190

>pdb|3LND|A Chain A, Crystal Structure Of Cadherin-6 Ec12 W4a Length = 207

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 206 TDLDDGINGRVRYTIISGDDNHDL-TISEDNGLLRIAKNLNYERKAQYSLTIQAED--CG 262
           +D D G +G ++Y I+SGD   DL  I+E+ G ++  K L+ E K  Y L  QA +   G
Sbjct: 26  SDQDRG-DGSLKY-ILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTG 83
Query: 263 GDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSL 322
              E    F      I + DINDN P+F    Y A V E    G +F ++ V A DAD  
Sbjct: 84  RPVEPESEF-----IIKIHDINDNEPIFTKDVYTATVPEMADVG-TF-VVQVTATDADDP 136
Query: 323 PFNGLVRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGDIY-LLKSLDREKQAEYLLTLQA 381
            +    +                      F V S TG I   L ++DRE + +Y + +QA
Sbjct: 137 TYGNSAKVVYS-----------ILQGQPYFSVESETGIIKTALLNMDRENREQYQVVIQA 185
Query: 382 MD 383
            D
Sbjct: 186 KD 187

>pdb|3MVS|A Chain A, Structure Of The N-Terminus Of Cadherin 23 Length = 210

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 86  IPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPF-SLGPVDGLLRVAQKLDREIK 144
           I E++P+ + V  L A D D   N  + + +   EA+ F ++ P  G++ + Q LDRE K
Sbjct: 19  ISEDTPVGSSVTQLLARDMD---NDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETK 75
Query: 145 SNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVS 204
           S +T+E    D          K  I++ D NDN P F ++ YS  +PEN  VG  +  V+
Sbjct: 76  SEFTVEFSVSDH---QGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVN 132
Query: 205 ATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGD 264
           ATD D G  G V Y+      +    I    G++ + + L+YE    Y LT+ A D    
Sbjct: 133 ATDPDLGAGGSVLYSF--QPPSPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD---Q 187
Query: 265 TEERIRFDTATVSILVSDIND 285
            + R     A ++I+++D+ D
Sbjct: 188 DKTRPLSTLANLAIIITDMQD 208

>pdb|3MVS|A Chain A, Structure Of The N-Terminus Of Cadherin 23 Length = 210

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 26/194 (13%)
Query: 190 VPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERK 249
           + E+  VG++V Q+ A D+D   N  + + +   + +    +  D G++ + + L+ E K
Sbjct: 19  ISEDTPVGSSVTQLLARDMD---NDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETK 75
Query: 250 AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSF 309
           +++++     D  G         T  V+I V D+NDN P F + PY   + ENT  G   
Sbjct: 76  SEFTVEFSVSDHQGVI-------TRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTP- 127
Query: 310 RIMTVQAHDADSLPFNGLVRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGDIYLLKSLDR 369
            I  V A D D L   G V Y  +                  F ++S  G + +++ LD 
Sbjct: 128 -IFIVNATDPD-LGAGGSVLYSFQ-------------PPSPFFAIDSARGIVTVIQELDY 172
Query: 370 EKQAEYLLTLQAMD 383
           E    Y LT+ A D
Sbjct: 173 EVTQAYQLTVNATD 186

>pdb|3UBH|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-4 Length = 419

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 161/360 (44%), Gaps = 46/360 (12%)
Query: 3   GRLEYSIVSGDDEEIFTI---NP-----SNGTLSNLKHLDRET---KSSYNLVVMATDMA 51
           G+  + +    D+E F I   NP     +NG +   K  D E    + + +  V+ T+M 
Sbjct: 25  GKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMG 84
Query: 52  KPPQKRLSSTTQVSIVIRDVNDNAPEFIT---ANETTIPENSPLNTVVAALKAIDRDEGQ 108
                + +   +V I+++DVND  P FI      +  +  N+P NT V  L+A D D   
Sbjct: 85  HNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDH 144
Query: 109 NSYVEYSII-NSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKF 167
           N  + Y I+ +     F +    G++R       ++   Y L +KA+D+       R   
Sbjct: 145 N--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRR--- 199
Query: 168 FIRLLDE------NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTI- 220
           F    +E          P F   SY A +PEN    + ++ + A    D     +RYT+ 
Sbjct: 200 FQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFAD---REIRYTLK 256
Query: 221 ISGDDNHDLTISEDNGLLRIAKNLNYERKAQ---YSLTIQA-EDCGGDTEERIRFDTAT- 275
             G       I   +G++++AK L++E   Q   YSL + A ED GG       F T+  
Sbjct: 257 AQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG-------FSTSVD 309
Query: 276 VSILVSDINDNYPVFLHSPYLAL-VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKD 334
           ++I V+D+NDN P F    Y A  V+E+   G S  I+ V+A D+DS   N  + Y + D
Sbjct: 310 LTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTS--ILRVKAMDSDSGS-NAEIEYLVSD 366

>pdb|4AQE|A Chain A, Crystal Structure Of Deafness Associated Mutant Mouse Cadherin-23 Ec1-2s70p And Protocadherin-15 Ec1-2 Form I Length = 214

Iteration: 1
 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 86  IPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPF-SLGPVDGLLRVAQKLDREIK 144
           I E++P+ + V  L A D D   N  + + +   EA+ F ++ P  G++ + Q LDRE K
Sbjct: 20  ISEDTPVGSSVTQLLARDMD---NDPLVFGVPGEEASRFFAVEPDTGVVWLRQPLDRETK 76
Query: 145 SNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVS 204
           S +T+E    D          K  I++ D NDN P F ++ YS  +PEN  VG  +  V+
Sbjct: 77  SEFTVEFSVSDH---QGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVN 133
Query: 205 ATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGD 264
           ATD D G  G V Y+      +    I    G++ + + L+YE    Y LT+ A D    
Sbjct: 134 ATDPDLGAGGSVLYSF--QPPSPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD---Q 188
Query: 265 TEERIRFDTATVSILVSDI 283
            + R     A ++I+++D+
Sbjct: 189 DKTRPLSTLANLAIIITDL 207

>pdb|4AQE|A Chain A, Crystal Structure Of Deafness Associated Mutant Mouse Cadherin-23 Ec1-2s70p And Protocadherin-15 Ec1-2 Form I Length = 214

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 26/192 (13%)
Query: 192 ENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQ 251
           E+  VG++V Q+ A D+D   N  + + +   + +    +  D G++ + + L+ E K++
Sbjct: 22  EDTPVGSSVTQLLARDMD---NDPLVFGVPGEEASRFFAVEPDTGVVWLRQPLDRETKSE 78
Query: 252 YSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRI 311
           +++     D  G         T  V+I V D+NDN P F + PY   + ENT  G    I
Sbjct: 79  FTVEFSVSDHQGVI-------TRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTP--I 129
Query: 312 MTVQAHDADSLPFNGLVRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGDIYLLKSLDREK 371
             V A D D L   G V Y  +                  F ++S  G + +++ LD E 
Sbjct: 130 FIVNATDPD-LGAGGSVLYSFQ-------------PPSPFFAIDSARGIVTVIQELDYEV 175
Query: 372 QAEYLLTLQAMD 383
              Y LT+ A D
Sbjct: 176 TQAYQLTVNATD 187

>pdb|1NCJ|A Chain A, N-Cadherin, Two-Domain Fragment Length = 215

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 18/211 (8%)
Query: 86  IPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSEA--TP---FSLGPVDGLLRVAQK 138
           +PENS  P    +  +++ DRD  +N  + YS+    A   P   F + P+ G L V + 
Sbjct: 9   LPENSRGPFPQELVRIRS-DRD--KNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 65
Query: 139 LDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGA 198
           LDRE+ + + L   A D       +     I ++D NDN P F  + ++ SVPE    G 
Sbjct: 66  LDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGT 125
Query: 199 TVLQVSATDLDD--GINGRVRYTIISGDDN----HDLTISEDNG-LLRIAKNLNYERKAQ 251
            V+ V+A D DD   +NG +RY I+S   +    +  TI+ + G ++ +A  L+ E+  Q
Sbjct: 126 YVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQ 185
Query: 252 YSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
           Y+L IQA D  G+    +  +TAT  I V+D
Sbjct: 186 YTLIIQATDMEGNPTYGLS-NTATAVITVTD 215

>pdb|1NCJ|A Chain A, N-Cadherin, Two-Domain Fragment Length = 215

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I+  +G L + K L+ E  A++ L   A D  G+  E    +   + I V D+NDN P F
Sbjct: 53  INPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVE----NPIDIVINVIDMNDNRPEF 108
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADSL-PFNGLVRYFLKDXXXXXXXXXXXXXXX 349
           LH  +   V E + PG    +MTV A DAD     NG++RY +                 
Sbjct: 109 LHQVWNGSVPEGSKPG--TYVMTVTAIDADDPNALNGMLRYRI-------VSQAPSTPSP 159
Query: 350 DLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
           ++F +N+ TGDI  + + LDREK  +Y L +QA D
Sbjct: 160 NMFTINNETGDIITVAAGLDREKVQQYTLIIQATD 194

>pdb|2WCP|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length = 214

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 86  IPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPF-SLGPVDGLLRVAQKLDREIK 144
           I E++P+ + V  L A D D   N  + + +   EA+ F ++ P  G++ + Q LDRE K
Sbjct: 20  ISEDTPVGSSVTQLLARDMD---NDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETK 76
Query: 145 SNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVS 204
           S +T+E    D          K  I++ D NDN P F ++ YS  +PEN  VG  +  V+
Sbjct: 77  SEFTVEFSVSDH---QGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVN 133
Query: 205 ATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGD 264
           ATD D G  G V Y+      +    I    G++ + + L+YE    Y LT+ A D    
Sbjct: 134 ATDPDLGAGGSVLYSF--QPPSPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD---Q 188
Query: 265 TEERIRFDTATVSILVSDI 283
            + R     A ++I+++D+
Sbjct: 189 DKTRPLSTLANLAIIITDL 207

>pdb|2WCP|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1-2 Length = 214

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 26/194 (13%)
Query: 190 VPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERK 249
           + E+  VG++V Q+ A D+D   N  + + +   + +    +  D G++ + + L+ E K
Sbjct: 20  ISEDTPVGSSVTQLLARDMD---NDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETK 76
Query: 250 AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSF 309
           +++++     D  G         T  V+I V D+NDN P F + PY   + ENT  G   
Sbjct: 77  SEFTVEFSVSDHQGVI-------TRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTP- 128
Query: 310 RIMTVQAHDADSLPFNGLVRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGDIYLLKSLDR 369
            I  V A D D L   G V Y  +                  F ++S  G + +++ LD 
Sbjct: 129 -IFIVNATDPD-LGAGGSVLYSFQ-------------PPSPFFAIDSARGIVTVIQELDY 173
Query: 370 EKQAEYLLTLQAMD 383
           E    Y LT+ A D
Sbjct: 174 EVTQAYQLTVNATD 187

>pdb|2QVI|A Chain A, Crystal Structure Of N-Cadherin Domains Ec12 Length = 215

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 18/211 (8%)
Query: 86  IPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSEA--TP---FSLGPVDGLLRVAQK 138
           +PENS  P    +  +++ DRD  +N  + YS+    A   P   F + P+ G L V + 
Sbjct: 9   LPENSRGPFPQELVRIRS-DRD--KNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 65
Query: 139 LDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGA 198
           LDRE+ + + L   A D       +     I ++D NDN P F  + ++ SVPE    G 
Sbjct: 66  LDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGT 125
Query: 199 TVLQVSATDLDD--GINGRVRYTIISGDDN----HDLTISEDNG-LLRIAKNLNYERKAQ 251
            V+ V+A D DD   +NG +RY I+S   +    +  TI+ + G ++ +A  L+ E+  Q
Sbjct: 126 YVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQ 185
Query: 252 YSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
           Y+L IQA D  G+    +  +TAT  I V+D
Sbjct: 186 YTLIIQATDMEGNPTYGLS-NTATAVITVTD 215

>pdb|2QVI|A Chain A, Crystal Structure Of N-Cadherin Domains Ec12 Length = 215

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I+  +G L + K L+ E  A++ L   A D  G+  E    +   + I V D+NDN P F
Sbjct: 53  INPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVE----NPIDIVINVIDMNDNRPEF 108
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADSL-PFNGLVRYFLKDXXXXXXXXXXXXXXX 349
           LH  +   V E + PG    +MTV A DAD     NG++RY +                 
Sbjct: 109 LHQVWNGSVPEGSKPG--TYVMTVTAIDADDPNALNGMLRYRI-------LSQAPSTPSP 159
Query: 350 DLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
           ++F +N+ TGDI  + + LDREK  +Y L +QA D
Sbjct: 160 NMFTINNETGDIITVAAGLDREKVQQYTLIIQATD 194

>pdb|2A4E|A Chain A, Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length = 215

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 26/199 (13%)
Query: 77  EFITANETTIPENSPLNTVVAALKA-IDRDEGQNSYVEYSIINSEA--TPFSLGPVDGLL 133
           +F    E T P+  P+  +V  L + ID  +G   Y    I++ E   T F +    G +
Sbjct: 7   QFFVIEEYTGPD--PV--LVGRLHSDIDSGDGNIKY----ILSGEGAGTIFVIDDKSGNI 58
Query: 134 RVAQKLDREIKSNYTLEIKAKDRG-----EPSKSSRTKFFIRLLDENDNNPIFDSKSYSA 188
              + LDRE ++ YTL  +A DR      EP     ++F +++ D NDN P F  + Y A
Sbjct: 59  HATKTLDREERAQYTLMAQAVDRDTNRPLEPP----SEFIVKVQDINDNPPEFLHEIYHA 114
Query: 189 SVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISEDNGLLRIA-KNL 244
           +VPE  +VG +V+QV+A+D DD   G + ++ Y+I+ G      ++    G++R A  N+
Sbjct: 115 NVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQPY--FSVEAQTGIIRTALPNM 172
Query: 245 NYERKAQYSLTIQAEDCGG 263
           + E K +Y + IQA+D GG
Sbjct: 173 DREAKEEYHVVIQAKDMGG 191

>pdb|2A4E|A Chain A, Crystal Structure Of Mouse Cadherin-11 Ec1-2 Length = 215

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 26/183 (14%)
Query: 206 TDLDDGINGRVRYTIISGDDNHDLTISED-NGLLRIAKNLNYERKAQYSLTIQAEDCGGD 264
           +D+D G +G ++Y I+SG+    + + +D +G +   K L+ E +AQY+L  QA D   D
Sbjct: 27  SDIDSG-DGNIKY-ILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDR--D 82
Query: 265 TEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPF 324
           T   +   +  + + V DINDN P FLH  Y A V E +  G S  ++ V A DAD   +
Sbjct: 83  TNRPLEPPSEFI-VKVQDINDNPPEFLHEIYHANVPERSNVGTS--VIQVTASDADDPTY 139
Query: 325 NG---LVRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGDIY-LLKSLDREKQAEYLLTLQ 380
                LV   L+                  F V + TG I   L ++DRE + EY + +Q
Sbjct: 140 GNSAKLVYSILEGQP--------------YFSVEAQTGIIRTALPNMDREAKEEYHVVIQ 185
Query: 381 AMD 383
           A D
Sbjct: 186 AKD 188

>pdb|2WD0|A Chain A, Crystal Structure Of Nonsyndromic Deafness (Dfnb12) Associated Mutant D124g Of Mouse Cadherin-23 Ec1-2 Length = 214

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 86  IPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPF-SLGPVDGLLRVAQKLDREIK 144
           I E++P+ + V  L A D D   N  + + +   EA+ F ++ P  G++ + Q LDRE K
Sbjct: 20  ISEDTPVGSSVTQLLARDMD---NDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETK 76
Query: 145 SNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVS 204
           S +T+E    D          K  I++   NDN P F ++ YS  +PEN  VG  +  V+
Sbjct: 77  SEFTVEFSVSDH---QGVITRKVNIQVGGVNDNAPTFHNQPYSVRIPENTPVGTPIFIVN 133
Query: 205 ATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGD 264
           ATD D G  G V Y+      +    I    G++ + + L+YE    Y LT+ A D    
Sbjct: 134 ATDPDLGAGGSVLYSF--QPPSPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD---Q 188
Query: 265 TEERIRFDTATVSILVSDI 283
            + R     A ++I+++D+
Sbjct: 189 DKTRPLSTLANLAIIITDL 207

>pdb|2WD0|A Chain A, Crystal Structure Of Nonsyndromic Deafness (Dfnb12) Associated Mutant D124g Of Mouse Cadherin-23 Ec1-2 Length = 214

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 26/194 (13%)
Query: 190 VPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERK 249
           + E+  VG++V Q+ A D+D   N  + + +   + +    +  D G++ + + L+ E K
Sbjct: 20  ISEDTPVGSSVTQLLARDMD---NDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETK 76
Query: 250 AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSF 309
           +++++     D  G         T  V+I V  +NDN P F + PY   + ENT  G   
Sbjct: 77  SEFTVEFSVSDHQGVI-------TRKVNIQVGGVNDNAPTFHNQPYSVRIPENTPVGTP- 128
Query: 310 RIMTVQAHDADSLPFNGLVRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGDIYLLKSLDR 369
            I  V A D D L   G V Y  +                  F ++S  G + +++ LD 
Sbjct: 129 -IFIVNATDPD-LGAGGSVLYSFQ-------------PPSPFFAIDSARGIVTVIQELDY 173
Query: 370 EKQAEYLLTLQAMD 383
           E    Y LT+ A D
Sbjct: 174 EVTQAYQLTVNATD 187

>pdb|1FF5|A Chain A, Structure Of E-Cadherin Double Domain Length = 219

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 59  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 118
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 119 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTS 178
Query: 243 NLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDN 286
            L+ E    Y+L +QA D  G+        TA   I V DINDN
Sbjct: 179 GLDRESYPTYTLVVQAADLQGEGLST----TAKAVITVKDINDN 218

>pdb|1FF5|A Chain A, Structure Of E-Cadherin Double Domain Length = 219

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I  + G L++ + L+ E  A+Y L   A    G+  E    D   + I V+D NDN P F
Sbjct: 54  IERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVE----DPMEIVITVTDQNDNRPEF 109
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXXXX 348
               +   V E  +PG S  +M V A DAD     +N  + Y +                
Sbjct: 110 TQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPELPH 160
Query: 349 XDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
            ++F VN  TG I +L S LDRE    Y L +QA D
Sbjct: 161 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 196

>pdb|3PPE|A Chain A, Crystal Structure Of Chicken Ve-Cadherin Ec1-2 Length = 203

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 116 IINSEA--TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDR-GEPSKSSRTKFFIRLL 172
           II  E+  T F +   DG +   ++LDRE K+ Y L     DR    S    +KF I++ 
Sbjct: 36  IIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVS 95
Query: 173 DENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDL 229
           D NDN PIF  K ++ SVPE   +G +V +V+A D DD     +  V Y II G  N   
Sbjct: 96  DINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKG--NEYF 153
Query: 230 TISEDNGLLRIAK-NLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
           T+ +D+G++  A+ +L+ E ++ Y + ++A+D  G T E     TATV I ++D
Sbjct: 154 TV-DDSGVIFTARADLDRESQSAYEIIVKAKDALGLTGES---STATVIIRLTD 203

>pdb|3LNI|A Chain A, Crystal Structure Of E-Cadherin Ec12 E89a Length = 213

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      + +   +  I + D+NDN P F  + +  SV
Sbjct: 58  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVADPMEIVITVTDQNDNRPEFTQEVFEGSV 117
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 118 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTS 177
Query: 243 NLNYERKAQYSLTIQAEDCGGD 264
            L+ E    Y+L +QA D  G+
Sbjct: 178 GLDRESYPTYTLVVQAADLQGE 199

>pdb|3LNI|A Chain A, Crystal Structure Of E-Cadherin Ec12 E89a Length = 213

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I  + G L++ + L+ E  A+Y L   A    G+       D   + I V+D NDN P F
Sbjct: 53  IERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVA----DPMEIVITVTDQNDNRPEF 108
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXXXX 348
               +   V E  +PG S  +M V A DAD     +N  + Y +                
Sbjct: 109 TQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPELPH 159
Query: 349 XDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
            ++F VN  TG I +L S LDRE    Y L +QA D
Sbjct: 160 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 195

>pdb|3UBF|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-3, I Length = 316

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 137/311 (44%), Gaps = 42/311 (13%)
Query: 3   GRLEYSIVSGDDEEIFTI---NP-----SNGTLSNLKHLDRET---KSSYNLVVMATDMA 51
           G+  + +    D+E F I   NP     +NG +   K  D E    + + +  V+ T+M 
Sbjct: 20  GKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMG 79
Query: 52  KPPQKRLSSTTQVSIVIRDVNDNAPEFIT---ANETTIPENSPLNTVVAALKAIDRDEGQ 108
                + +   +V I+++DVND  P FI      +  +  N+P NT V  L+A D D   
Sbjct: 80  HNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDH 139
Query: 109 NSYVEYSII-NSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKF 167
           N  + Y I+ +     F +    G++R       ++   Y L +KA+D+       R   
Sbjct: 140 N--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRR--- 194
Query: 168 FIRLLDE------NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTI- 220
           F    +E          P F   SY A +PEN    + ++ + A    D     +RYT+ 
Sbjct: 195 FQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFAD---REIRYTLK 251
Query: 221 ISGDDNHDLTISEDNGLLRIAKNLNYERKAQ---YSLTIQA-EDCGGDTEERIRFDTAT- 275
             G       I   +G++++AK L++E   Q   YSL + A ED GG       F T+  
Sbjct: 252 AQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG-------FSTSVD 304
Query: 276 VSILVSDINDN 286
           ++I V+D+NDN
Sbjct: 305 LTIRVTDVNDN 315

>pdb|3Q2L|A Chain A, Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 58  GWLKVTQPLDREAIAKYILYSHADSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 117
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 118 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTS 177
Query: 243 NLNYERKAQYSLTIQAEDCGGD 264
            L+ E    Y+L +QA D  G+
Sbjct: 178 GLDRESYPTYTLVVQAADLQGE 199

>pdb|3Q2L|A Chain A, Mouse E-Cadherin Ec1-2 V81d Mutant Length = 213

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I  + G L++ + L+ E  A+Y L   A+   G+  E    D   + I V+D NDN P F
Sbjct: 53  IERETGWLKVTQPLDREAIAKYILYSHADSSNGEAVE----DPMEIVITVTDQNDNRPEF 108
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXXXX 348
               +   V E  +PG S  +M V A DAD     +N  + Y +                
Sbjct: 109 TQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPELPH 159
Query: 349 XDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
            ++F VN  TG I +L S LDRE    Y L +QA D
Sbjct: 160 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 195

>pdb|3LNE|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14e Length = 213

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 58  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 117
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 118 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTS 177
Query: 243 NLNYERKAQYSLTIQAEDCGGD 264
            L+ E    Y+L +QA D  G+
Sbjct: 178 GLDRESYPTYTLVVQAADLQGE 199

>pdb|3LNE|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14e Length = 213

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I  + G L++ + L+ E  A+Y L   A    G+  E    D   + I V+D NDN P F
Sbjct: 53  IERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVE----DPMEIVITVTDQNDNRPEF 108
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXXXX 348
               +   V E  +PG S  +M V A DAD     +N  + Y +                
Sbjct: 109 TQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPELPH 159
Query: 349 XDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
            ++F VN  TG I +L S LDRE    Y L +QA D
Sbjct: 160 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 195

>pdb|3LNG|A Chain A, Crystal Structure Of E-Cadherin Ec12 Aa Extension Length = 215

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 60  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 119
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 120 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTS 179
Query: 243 NLNYERKAQYSLTIQAEDCGGD 264
            L+ E    Y+L +QA D  G+
Sbjct: 180 GLDRESYPTYTLVVQAADLQGE 201

>pdb|3LNG|A Chain A, Crystal Structure Of E-Cadherin Ec12 Aa Extension Length = 215

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I  + G L++ + L+ E  A+Y L   A    G+  E    D   + I V+D NDN P F
Sbjct: 55  IERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVE----DPMEIVITVTDQNDNRPEF 110
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXXXX 348
               +   V E  +PG S  +M V A DAD     +N  + Y +                
Sbjct: 111 TQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPELPH 161
Query: 349 XDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
            ++F VN  TG I +L S LDRE    Y L +QA D
Sbjct: 162 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 197

>pdb|3LNF|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14ew2a Length = 213

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 58  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 117
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 118 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTS 177
Query: 243 NLNYERKAQYSLTIQAEDCGGD 264
            L+ E    Y+L +QA D  G+
Sbjct: 178 GLDRESYPTYTLVVQAADLQGE 199

>pdb|3LNF|A Chain A, Crystal Structure Of E-Cadherin Ec12 K14ew2a Length = 213

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I  + G L++ + L+ E  A+Y L   A    G+  E    D   + I V+D NDN P F
Sbjct: 53  IERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVE----DPMEIVITVTDQNDNRPEF 108
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXXXX 348
               +   V E  +PG S  +M V A DAD     +N  + Y +                
Sbjct: 109 TQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPELPH 159
Query: 349 XDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
            ++F VN  TG I +L S LDRE    Y L +QA D
Sbjct: 160 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 195

>pdb|1Q1P|A Chain A, E-Cadherin Activation Length = 212

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 57  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 116
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 117 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTS 176
Query: 243 NLNYERKAQYSLTIQAEDCGGD 264
            L+ E    Y+L +QA D  G+
Sbjct: 177 GLDRESYPTYTLVVQAADLQGE 198

>pdb|1Q1P|A Chain A, E-Cadherin Activation Length = 212

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I  + G L++ + L+ E  A+Y L   A    G+  E    D   + I V+D NDN P F
Sbjct: 52  IERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVE----DPMEIVITVTDQNDNRPEF 107
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXXXX 348
               +   V E  +PG S  +M V A DAD     +N  + Y +                
Sbjct: 108 TQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPELPH 158
Query: 349 XDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
            ++F VN  TG I +L S LDRE    Y L +QA D
Sbjct: 159 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 194

>pdb|2QVF|B Chain B, Mouse E-cadherin Domains 1,2 Length = 213

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 58  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 117
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 118 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTS 177
Query: 243 NLNYERKAQYSLTIQAEDCGGD 264
            L+ E    Y+L +QA D  G+
Sbjct: 178 GLDRESYPTYTLVVQAADLQGE 199

>pdb|2QVF|B Chain B, Mouse E-cadherin Domains 1,2 Length = 213

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I  + G L++ + L+ E  A+Y L   A    G+  E    D   + I V+D NDN P F
Sbjct: 53  IERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVE----DPMEIVITVTDQNDNRPEF 108
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXXXX 348
               +   V E  +PG S  +M V A DAD     +N  + Y +                
Sbjct: 109 TQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPELPH 159
Query: 349 XDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
            ++F VN  TG I +L S LDRE    Y L +QA D
Sbjct: 160 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 195

>pdb|3LNH|A Chain A, Crystal Structure Of E-Cadherin Ec12 W2a Length = 213

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 58  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 117
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 118 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTS 177
Query: 243 NLNYERKAQYSLTIQAEDCGGD 264
            L+ E    Y+L +QA D  G+
Sbjct: 178 GLDRESYPTYTLVVQAADLQGE 199

>pdb|3LNH|A Chain A, Crystal Structure Of E-Cadherin Ec12 W2a Length = 213

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I  + G L++ + L+ E  A+Y L   A    G+  E    D   + I V+D NDN P F
Sbjct: 53  IERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVE----DPMEIVITVTDQNDNRPEF 108
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXXXX 348
               +   V E  +PG S  +M V A DAD     +N  + Y +                
Sbjct: 109 TQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPELPH 159
Query: 349 XDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
            ++F VN  TG I +L S LDRE    Y L +QA D
Sbjct: 160 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 195

>pdb|3QRB|A Chain A, Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Length = 213

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 58  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 117
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 118 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTS 177
Query: 243 NLNYERKAQYSLTIQAEDCGGD 264
            L+ E    Y+L +QA D  G+
Sbjct: 178 GLDRESYPTYTLVVQAADLQGE 199

>pdb|3QRB|A Chain A, Crystal Structure Of E-Cadherin Ec1-2 P5a P6a Length = 213

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I  + G L++ + L+ E  A+Y L   A    G+  E    D   + I V+D NDN P F
Sbjct: 53  IERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVE----DPMEIVITVTDQNDNRPEF 108
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXXXX 348
               +   V E  +PG S  +M V A DAD     +N  + Y +                
Sbjct: 109 TQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPELPH 159
Query: 349 XDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
            ++F VN  TG I +L S LDRE    Y L +QA D
Sbjct: 160 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 195

>pdb|3Q2N|A Chain A, Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 58  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 117
Query: 191 PENISVGATVLQVSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRI-AK 242
            E    G +V++VSATD DD +   N  + YTI+S D      +  T++ D G++ +   
Sbjct: 118 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVDTS 177
Query: 243 NLNYERKAQYSLTIQAEDCGGD 264
            L+ E    Y+L +QA D  G+
Sbjct: 178 GLDRESYPTYTLVVQAADLQGE 199

>pdb|3Q2N|A Chain A, Mouse E-Cadherin Ec1-2 L175d Mutant Length = 213

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           I  + G L++ + L+ E  A+Y L   A    G+  E    D   + I V+D NDN P F
Sbjct: 53  IERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVE----DPMEIVITVTDQNDNRPEF 108
Query: 291 LHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDXXXXXXXXXXXXXX 348
               +   V E  +PG S  +M V A DAD     +N  + Y +                
Sbjct: 109 TQEVFEGSVAEGAVPGTS--VMKVSATDADDDVNTYNAAIAYTI-------VSQDPELPH 159
Query: 349 XDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
            ++F VN  TG I +  S LDRE    Y L +QA D
Sbjct: 160 KNMFTVNRDTGVISVDTSGLDRESYPTYTLVVQAAD 195

>pdb|2O72|A Chain A, Crystal Structure Analysis Of Human E-Cadherin (1-213) Length = 213

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 16/190 (8%)
Query: 88  ENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA-TP----FSLGPVDGLLRVAQKLDRE 142
           E  P    +  +K+    EG+   V YSI    A TP    F +    G L+V + LDRE
Sbjct: 13  EKGPFPKNLVQIKSNKDKEGK---VFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRE 69
Query: 143 IKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQ 202
             + YTL   A      +     +  I + D+NDN P F  + +  SV E    G +V++
Sbjct: 70  RIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVMEGALPGTSVME 129
Query: 203 VSATDLDDGI---NGRVRYTIISGD----DNHDLTISEDNGLLRIA-KNLNYERKAQYSL 254
           V+ATD DD +   N  + YTI+S D    D +  TI+ + G++ +    L+ E    Y+L
Sbjct: 130 VTATDADDDVNTYNAAIAYTILSQDPELPDKNMFTINRNTGVISVVTTGLDRESFPTYTL 189
Query: 255 TIQAEDCGGD 264
            +QA D  G+
Sbjct: 190 VVQAADLQGE 199

>pdb|2O72|A Chain A, Crystal Structure Analysis Of Human E-Cadherin (1-213) Length = 213

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 214 GRVRYTIIS-GDDNHDL---TISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERI 269
           G+V Y+I   G D   +    I  + G L++ + L+ ER A Y+L   A    G+  E  
Sbjct: 32  GKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVE-- 89
Query: 270 RFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADS--LPFNGL 327
             D   + I V+D NDN P F    +   V E  LPG S  +M V A DAD     +N  
Sbjct: 90  --DPMEILITVTDQNDNKPEFTQEVFKGSVMEGALPGTS--VMEVTATDADDDVNTYNAA 145
Query: 328 VRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMD 383
           + Y +                 ++F +N  TG I ++ + LDRE    Y L +QA D
Sbjct: 146 IAYTI-------LSQDPELPDKNMFTINRNTGVISVVTTGLDRESFPTYTLVVQAAD 195

>pdb|2YST|A Chain A, Solution Structure Of The Third Cadherin Domain From Human Protocadherin 7 Length = 119

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDN--HDLTIS 232
           NDN+P F+   Y A + EN + G  +LQ+ A DLD G+NG++ Y   +  ++    L + 
Sbjct: 8   NDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLD 67
Query: 233 EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYP 288
           E +G L +   ++ E   Q   T+ A D G    +  + D ATV + + D NDN P
Sbjct: 68  ETSGWLSVLHRIDREEVNQLRFTVMARDRG----QPPKTDKATVVLNIKDENDNVP 119

>pdb|3K5S|A Chain A, Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Length = 217

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 16/218 (7%)
Query: 79  ITANETTIPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSEATP-FSLGPVDGLLRV 135
           I A    IPEN   P    V  +   +  EG    +    ++ +    F +  + G + V
Sbjct: 2   ILATPILIPENQRPPFPRSVGKVIRSEGTEGAKFRLSGKGVDQDPKGIFRINEISGDVSV 61
Query: 136 AQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENIS 195
            + LDRE  +NY LE++  D          +  I ++D+NDN P+F    Y   V E   
Sbjct: 62  TRPLDREAIANYQLEVEVTDLSGKIIDGPVRLDISVIDQNDNRPMFKEGPYVGHVMEGSP 121
Query: 196 VGATVLQVSATDLDDGI--NGRVRYTII-----SGDDNHDLTISEDNGLLRIAKNLNYER 248
            G TV++++A D DD    N  +RY I+         N      E   ++ +   +  +R
Sbjct: 122 TGTTVMRMTAFDADDPSTDNALLRYNILKQTPTKPSPNMFYIDPEKGDIVTVVSPVLLDR 181
Query: 249 KA----QYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
           +     +Y L I+A+D GG   +     TAT +IL+ D
Sbjct: 182 ETMETPKYELVIEAKDMGG--HDVGLTGTATATILIDD 217

>pdb|3K5S|A Chain A, Crystal Structure Of Chicken T-Cadherin Ec1 Ec2 Length = 217

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDT-EERIRFDTATVSILVSDINDNYPV 289
           I+E +G + + + L+ E  A Y L ++  D  G   +  +R D     I V D NDN P+
Sbjct: 52  INEISGDVSVTRPLDREAIANYQLEVEVTDLSGKIIDGPVRLD-----ISVIDQNDNRPM 106
Query: 290 FLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPF-NGLVRY-FLKDXXXXXXXXXXXXX 347
           F   PY+  V E +  G +  +M + A DAD     N L+RY  LK              
Sbjct: 107 FKEGPYVGHVMEGSPTGTT--VMRMTAFDADDPSTDNALLRYNILK--------QTPTKP 156
Query: 348 XXDLFRVNSTTGDIYLLKS---LDRE--KQAEYLLTLQAMD 383
             ++F ++   GDI  + S   LDRE  +  +Y L ++A D
Sbjct: 157 SPNMFYIDPEKGDIVTVVSPVLLDRETMETPKYELVIEAKD 197

>pdb|2EE0|A Chain A, Solution Structures Of The Ca Domain Of Human Protocadherin 9 Length = 114

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTI---ISGDDNHDLTI 231
           NDN P+F        +PEN  VG +V+Q+ ATD D G N  +RY     ++        +
Sbjct: 8   NDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFAL 67
Query: 232 SEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDIN 284
           +   GL+ + ++L+ E  A + +T+ A D G  T  R     ATV+I V+D+N
Sbjct: 68  NNTTGLITVQRSLDREETAIHKVTVLASD-GSSTPAR-----ATVTINVTDVN 114

>pdb|2EE0|A Chain A, Solution Structures Of The Ca Domain Of Human Protocadherin 9 Length = 114

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 284 NDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDXXXXXXXXX 343
           NDN PVF        + EN   G S  ++ + A DAD +  N  +RY             
Sbjct: 8   NDNRPVFKEGQVEVHIPENAPVGTS--VIQLHATDAD-IGSNAEIRYIFG--------AQ 56
Query: 344 XXXXXXDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMD 383
                  LF +N+TTG I + +SLDRE+ A + +T+ A D
Sbjct: 57  VAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD 96

>pdb|3K5R|A Chain A, Crystal Structure Of Mouse T-Cadherin Ec1 Ec2 Length = 218

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 200 VLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAE 259
           V +V  +D  +G   R+    +  D      I+E+ G + + + L+ E  A Y L ++  
Sbjct: 22  VGKVVDSDRPEGSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETT 81
Query: 260 DCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDA 319
           D  G T E        + ++V D NDN P+F   PY+  V E +  G +  +M + A DA
Sbjct: 82  DASGKTLE----GPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTT--VMRMTAFDA 135
Query: 320 DSLPF-NGLVRYFLKDXXXXXXXXXXXXXXXDLFRVNSTTGDIYLLKS---LDRE--KQA 373
           D     N L+RY ++                ++F ++   GDI  + S   LDRE  +  
Sbjct: 136 DDPATDNALLRYNIR-------QQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENP 188
Query: 374 EYLLTLQAMD 383
           +Y L ++A D
Sbjct: 189 KYELIIEAQD 198

>pdb|4APX|B Chain B, Crystal Structure Of Mouse Cadherin-23 Ec1-2 And Protocadherin-15 Ec1-2 Form I Length = 242

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Query: 169 IRLLDENDNNPIFDSKSYSASVPENISVGATVLQV-----SATDLDDGINGRVRYTI--- 220
           I + D NDN+P F  +SY A+V E   VG T+         ATD+DDG NG++ Y I   
Sbjct: 115 IVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYN 174
Query: 221 ---ISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEER 268
               + +D  ++ +    G + + K LNYE K +Y + IQA D   +  ER
Sbjct: 175 PEDPTSNDTFEIPLML-TGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNER 224

>pdb|1SUH|A Chain A, Amino-Terminal Domain Of Epithelial Cadherin In The Calcium Bound State, Nmr, 20 Structures Length = 146

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 131 GLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASV 190
           G L+V Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV
Sbjct: 60  GWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSV 119
Query: 191 PENISVGATVLQVSATDLDDGIN 213
            E    G +V++VSATD DD +N
Sbjct: 120 AEGAVPGTSVMKVSATDADDDVN 142

>pdb|1SUH|A Chain A, Amino-Terminal Domain Of Epithelial Cadherin In The Calcium Bound State, Nmr, 20 Structures Length = 146

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 229 LTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYP 288
             I  + G L++ + L+ E  A+Y L   A    G+  E    D   + I V+D NDN P
Sbjct: 53  FIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVE----DPMEIVITVTDQNDNRP 108
Query: 289 VFLHSPYLALVNENTLPGPSFRIMTVQAHDAD 320
            F    +   V E  +PG S  +M V A DAD
Sbjct: 109 EFTQEVFEGSVAEGAVPGTS--VMKVSATDAD 138

>pdb|1ZXK|A Chain A, Crystal Structure Of Cadherin8 Ec1 Domain Length = 98

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 351 LFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMD 383
           +F++N  TGDI+ +K LDRE++AEY LT QA+D
Sbjct: 47  IFQINDITGDIHAIKRLDREEKAEYTLTAQAVD 79

>pdb|1NCH|A Chain A, Structural Basis Of Cell-Cell Adhesion By Cadherins Length = 110

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 5   LEYSIVS-GDDEE---IFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
           L YS+   G D+    IF INP +G LS  K LDRE  + ++L   A D+      ++ +
Sbjct: 36  LRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDING---NQVEN 92
Query: 61  TTQVSIVIRDVNDNAPEF 78
              + I + D+NDN PEF
Sbjct: 93  PIDIVINVIDMNDNRPEF 110

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	384
3q2v_A	550	Cadherin-1; cell adhesion, calcium binding; HET: M	1e-108
3q2v_A	550	Cadherin-1; cell adhesion, calcium binding; HET: M	1e-98
3q2v_A	550	Cadherin-1; cell adhesion, calcium binding; HET: M	4e-74
3q2v_A	550	Cadherin-1; cell adhesion, calcium binding; HET: M	1e-72
3q2v_A	550	Cadherin-1; cell adhesion, calcium binding; HET: M	2e-11
3q2w_A	559	Cadherin-2; cell adhesion, calcium binding; HET: M	1e-106
3q2w_A	559	Cadherin-2; cell adhesion, calcium binding; HET: M	1e-102
3q2w_A	559	Cadherin-2; cell adhesion, calcium binding; HET: M	4e-73
3q2w_A	559	Cadherin-2; cell adhesion, calcium binding; HET: M	2e-71
3q2w_A	559	Cadherin-2; cell adhesion, calcium binding; HET: M	1e-44
3q2w_A	559	Cadherin-2; cell adhesion, calcium binding; HET: M	3e-12
3ubh_A	419	Neural-cadherin; cell adhesion; 2.70A {Drosophila	1e-106
3ubh_A	419	Neural-cadherin; cell adhesion; 2.70A {Drosophila	5e-76
3ubh_A	419	Neural-cadherin; cell adhesion; 2.70A {Drosophila	5e-74
3ubh_A	419	Neural-cadherin; cell adhesion; 2.70A {Drosophila	4e-44
1l3w_A	546	EP-cadherin, C-cadherin; cell adhesion, calcium bi	1e-105
1l3w_A	546	EP-cadherin, C-cadherin; cell adhesion, calcium bi	2e-95
1l3w_A	546	EP-cadherin, C-cadherin; cell adhesion, calcium bi	2e-73
1l3w_A	546	EP-cadherin, C-cadherin; cell adhesion, calcium bi	3e-71
1l3w_A	546	EP-cadherin, C-cadherin; cell adhesion, calcium bi	3e-37
1q55_A	880	EP-cadherin, C-cadherin; trans interaction, desmos	4e-92
1q55_A	880	EP-cadherin, C-cadherin; trans interaction, desmos	1e-82
1q55_A	880	EP-cadherin, C-cadherin; trans interaction, desmos	3e-61
1q55_A	880	EP-cadherin, C-cadherin; trans interaction, desmos	4e-36
1q55_A	880	EP-cadherin, C-cadherin; trans interaction, desmos	1e-33
1q55_A	880	EP-cadherin, C-cadherin; trans interaction, desmos	8e-08
2a62_A	322	Cadherin-8; extracellular domain, homodimer, calci	1e-89
2a62_A	322	Cadherin-8; extracellular domain, homodimer, calci	2e-81
2a62_A	322	Cadherin-8; extracellular domain, homodimer, calci	2e-47
2a62_A	322	Cadherin-8; extracellular domain, homodimer, calci	3e-45
2a62_A	322	Cadherin-8; extracellular domain, homodimer, calci	6e-14
2a62_A	322	Cadherin-8; extracellular domain, homodimer, calci	9e-14
3ubf_A	316	Neural-cadherin; cell adhesion; 2.50A {Drosophila	1e-78
3ubf_A	316	Neural-cadherin; cell adhesion; 2.50A {Drosophila	1e-78
3ubf_A	316	Neural-cadherin; cell adhesion; 2.50A {Drosophila	1e-40
3ubf_A	316	Neural-cadherin; cell adhesion; 2.50A {Drosophila	1e-17
3mvs_A	210	Cadherin-23, otocadherin; adhesion, extracellular	3e-67
3mvs_A	210	Cadherin-23, otocadherin; adhesion, extracellular	3e-59
3mvs_A	210	Cadherin-23, otocadherin; adhesion, extracellular	3e-57
2a4e_A	215	Cadherin-11; dimer, calcium binding, cell adhesion	1e-60
2a4e_A	215	Cadherin-11; dimer, calcium binding, cell adhesion	1e-54
2a4e_A	215	Cadherin-11; dimer, calcium binding, cell adhesion	5e-51
2a4e_A	215	Cadherin-11; dimer, calcium binding, cell adhesion	9e-22
2a4e_A	215	Cadherin-11; dimer, calcium binding, cell adhesion	3e-17
2qvi_A	215	Cadherin-2; beta barrel, strand SWAP, domain SWAP,	1e-60
2qvi_A	215	Cadherin-2; beta barrel, strand SWAP, domain SWAP,	8e-48
2qvi_A	215	Cadherin-2; beta barrel, strand SWAP, domain SWAP,	8e-45
2qvi_A	215	Cadherin-2; beta barrel, strand SWAP, domain SWAP,	1e-13
3qrb_A	213	Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu	4e-60
3qrb_A	213	Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu	3e-48
3qrb_A	213	Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu	1e-46
3qrb_A	213	Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu	4e-16
3qrb_A	213	Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu	2e-13
3lnd_A	207	CDH6 protein, cadherin 6; cell adhesion, cell memb	3e-57
3lnd_A	207	CDH6 protein, cadherin 6; cell adhesion, cell memb	6e-50
3lnd_A	207	CDH6 protein, cadherin 6; cell adhesion, cell memb	7e-50
3lnd_A	207	CDH6 protein, cadherin 6; cell adhesion, cell memb	2e-17
3lnd_A	207	CDH6 protein, cadherin 6; cell adhesion, cell memb	7e-17
3k5r_A	218	Cadherin 13; mouse, structural protein; 2.00A {Mus	9e-55
3k5r_A	218	Cadherin 13; mouse, structural protein; 2.00A {Mus	1e-50
3k5r_A	218	Cadherin 13; mouse, structural protein; 2.00A {Mus	3e-43
3k5r_A	218	Cadherin 13; mouse, structural protein; 2.00A {Mus	4e-13
3ppe_A	203	Vascular endothelial cadherin; extracellular cadhe	7e-54
3ppe_A	203	Vascular endothelial cadherin; extracellular cadhe	2e-51
3ppe_A	203	Vascular endothelial cadherin; extracellular cadhe	4e-47
3ppe_A	203	Vascular endothelial cadherin; extracellular cadhe	1e-12
2x2u_A	246	Proto-oncogene tyrosine-protein kinase receptor RE	7e-52
2x2u_A	246	Proto-oncogene tyrosine-protein kinase receptor RE	2e-47
2x2u_A	246	Proto-oncogene tyrosine-protein kinase receptor RE	4e-39
2yst_A	119	Protocadherin-7; BH-PCDH, beta-sandwich, structura	1e-33
2yst_A	119	Protocadherin-7; BH-PCDH, beta-sandwich, structura	2e-32
2yst_A	119	Protocadherin-7; BH-PCDH, beta-sandwich, structura	1e-21
2yst_A	119	Protocadherin-7; BH-PCDH, beta-sandwich, structura	5e-17
2ee0_A	114	Protocadherin-9; Ca domain, structural genomics, N	4e-30
2ee0_A	114	Protocadherin-9; Ca domain, structural genomics, N	3e-27
2ee0_A	114	Protocadherin-9; Ca domain, structural genomics, N	2e-20
2ee0_A	114	Protocadherin-9; Ca domain, structural genomics, N	3e-10
1ncg_A	110	N-cadherin; cell adhesion protein; 2.10A {Mus musc	2e-26
1ncg_A	110	N-cadherin; cell adhesion protein; 2.10A {Mus musc	2e-23
1ncg_A	110	N-cadherin; cell adhesion protein; 2.10A {Mus musc	7e-22
1ncg_A	110	N-cadherin; cell adhesion protein; 2.10A {Mus musc	2e-13
2yqg_A	123	Desmoglein-2, HDGC; cadherin, structural genomics,	3e-22
2yqg_A	123	Desmoglein-2, HDGC; cadherin, structural genomics,	2e-21
2yqg_A	123	Desmoglein-2, HDGC; cadherin, structural genomics,	9e-21
2yqg_A	123	Desmoglein-2, HDGC; cadherin, structural genomics,	9e-14
3k6f_A	100	T-cadherin; cell adhesion, calcium, cell membrane,	3e-20
3k6f_A	100	T-cadherin; cell adhesion, calcium, cell membrane,	4e-19
3k6f_A	100	T-cadherin; cell adhesion, calcium, cell membrane,	1e-16
3k6f_A	100	T-cadherin; cell adhesion, calcium, cell membrane,	3e-12
3k6d_A	99	T-cadherin; cell adhesion; 1.80A {Xenopus laevis}	5e-19
3k6d_A	99	T-cadherin; cell adhesion; 1.80A {Xenopus laevis}	8e-19
3k6d_A	99	T-cadherin; cell adhesion; 1.80A {Xenopus laevis}	7e-16
3k6d_A	99	T-cadherin; cell adhesion; 1.80A {Xenopus laevis}	2e-13
3k6i_A	99	T-cadherin; cell adhesion, alternative splicing, c	7e-19
3k6i_A	99	T-cadherin; cell adhesion, alternative splicing, c	8e-18
3k6i_A	99	T-cadherin; cell adhesion, alternative splicing, c	2e-15
3k6i_A	99	T-cadherin; cell adhesion, alternative splicing, c	1e-11
2omz_B	105	Epithelial-cadherin; leucine-rich-repeat, nvasion	1e-18
2omz_B	105	Epithelial-cadherin; leucine-rich-repeat, nvasion	5e-18
2omz_B	105	Epithelial-cadherin; leucine-rich-repeat, nvasion	2e-14
2omz_B	105	Epithelial-cadherin; leucine-rich-repeat, nvasion	3e-14
1zvn_A	99	Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal	1e-16
1zvn_A	99	Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal	1e-16
1zvn_A	99	Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal	5e-15
1zvn_A	99	Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal	1e-14
1zxk_A	98	Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu	3e-16
1zxk_A	98	Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu	1e-15
1zxk_A	98	Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu	3e-14
1zxk_A	98	Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu	5e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
1wyj_A	125	Protocadherin beta 14; SS bond, structural genomic	5e-06
1op4_A	159	Neural-cadherin; beta sandwich, cadherin-like doma	4e-04

>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550

 Score =  326 bits (839), Expect = e-108
 Identities = 106/408 (25%), Positives = 175/408 (42%), Gaps = 47/408 (11%)

Query: 2   NGRLEYSIVSGDDEE----IFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKR 57
             ++ YSI     ++    +F I    G L   + LDRE  + Y L   A          
Sbjct: 31  ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEA--- 87

Query: 58  LSSTTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEG---QNSYVE 113
           +    ++ I + D NDN PEF     E ++ E +   T V  + A D D+     N+ + 
Sbjct: 88  VEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIA 147

Query: 114 YSIINSEATP-----FSLGPVDGLLRVAQK-LDREIKSNYTLEIKAKDRGEPSKSSRTKF 167
           Y+I++ +        F++    G++ V    LDRE    YTL ++A D      S+  K 
Sbjct: 148 YTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKA 207

Query: 168 FIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGING--RVRYTIISGDD 225
            I + D NDN P+F+  +Y   VPEN  V A +  +  TD D       +  YT+++  D
Sbjct: 208 VITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVNDPD 266

Query: 226 NHDLTISEDN----GLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVS 281
                +  D     G+L+ AK L++E K QY L ++ E+        +   TATV++ V 
Sbjct: 267 QQ-FVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVP-STATVTVDVV 324

Query: 282 DINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGN 341
           D+N+  P+F+ +     V E+   G    I +  A + D+   +  + Y +         
Sbjct: 325 DVNEA-PIFMPAERRVEVPEDFGVGQE--ITSYTAREPDTFM-DQKITYRI--------- 371

Query: 342 SQTQGGTGDLFRVNSTTGDIYLLKSLDRE-----KQAEYLLTLQAMDS 384
                 T +   +N  TG I+    +DRE     K + Y+  + A D 
Sbjct: 372 ---WRDTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDD 416

>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550

 Score =  302 bits (776), Expect = 1e-98
 Identities = 98/404 (24%), Positives = 161/404 (39%), Gaps = 47/404 (11%)

Query: 1   DNGRLEYSIVSGDDE----EIFTINPSNGTLSNLKH-LDRETKSSYNLVVMATDMAKPPQ 55
            N  + Y+IVS D E     +FT+N   G +S L   LDRE+  +Y LVV A D+     
Sbjct: 142 YNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEG- 200

Query: 56  KRLSSTTQVSIVIRDVNDNAPEF-ITANETTIPENSPLNTVVAALKAIDRDEGQN--SYV 112
             LS+T +  I ++D+NDNAP F  +  +  +PEN   N  +A LK  D D         
Sbjct: 201 --LSTTAKAVITVKDINDNAPVFNPSTYQGQVPENEV-NARIATLKVTDDDAPNTPAWKA 257

Query: 113 EYSIINSEATPFSLGP----VDGLLRVAQKLDREIKSNYTLEIKAKDRGE---PSKSSRT 165
            Y+++N     F +       DG+L+ A+ LD E K  Y L ++ ++          S  
Sbjct: 258 VYTVVNDPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTA 317

Query: 166 KFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDD 225
              + ++D N+  PIF        VPE+  VG  +   +A + D  ++ ++ Y I     
Sbjct: 318 TVTVDVVDVNEA-PIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRDTA 376

Query: 226 NHDLTISEDNGLLRIAKNLNYE-----RKAQYSLTIQAEDCGGDTEERIRFDTATVSILV 280
           N  L I+ + G +     ++ E     + + Y   I A D G          T T+ +++
Sbjct: 377 NW-LEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPI----ATGTGTLLLVL 431

Query: 281 SDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSG 340
            D+NDN P+                        +   D D  P        L    + + 
Sbjct: 432 LDVNDNAPIPEPRNMQFCQRNPQ-------PHIITILDPDLPPNTSPFTAELTHGASVNW 484

Query: 341 NSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
                         N    +  +L+     +  EY + L+  D+
Sbjct: 485 ----------TIEYNDAAQESLILQPRKDLEIGEYKIHLKLADN 518

>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550

 Score =  239 bits (611), Expect = 4e-74
 Identities = 89/316 (28%), Positives = 130/316 (41%), Gaps = 36/316 (11%)

Query: 85  TIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-----PFSLGPVDGLLRVAQKL 139
           + PEN         L  I  +  + + V YSI    A       F +    G L+V Q L
Sbjct: 8   SCPENEK-GEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPL 66

Query: 140 DREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGAT 199
           DRE  + Y L   A      +     +  I + D+NDN P F  + +  SV E    G +
Sbjct: 67  DREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTS 126

Query: 200 VLQVSATDLDDGI---NGRVRYTIISGDDNHDL----TISEDNGLLRIAK-NLNYERKAQ 251
           V++VSATD DD +   N  + YTI+S D         T++ D G++ +    L+ E    
Sbjct: 127 VMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPT 186

Query: 252 YSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRI 311
           Y+L +QA D  G+        TA   I V DINDN PVF  S Y   V EN +      I
Sbjct: 187 YTLVVQAADLQGEG----LSTTAKAVITVKDINDNAPVFNPSTYQGQVPENEVNAR---I 239

Query: 312 MTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRV----NSTTGDIYLLKSL 367
            T++  D D+ P     +                      F V     +  G +   K L
Sbjct: 240 ATLKVTDDDA-PNTPAWKA----------VYTVVNDPDQQFVVVTDPTTNDGILKTAKGL 288

Query: 368 DREKQAEYLLTLQAMD 383
           D E + +Y+L ++  +
Sbjct: 289 DFEAKQQYILHVRVEN 304

>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550

 Score =  235 bits (601), Expect = 1e-72
 Identities = 62/309 (20%), Positives = 109/309 (35%), Gaps = 25/309 (8%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSN----GTLSNLKHLDRETKSSYNLVVMATDMAKPPQK 56
              +  Y++V  D ++ F +        G L   K LD E K  Y L V   +       
Sbjct: 253 PAWKAVYTVV-NDPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGS 311

Query: 57  RLSSTTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYS 115
            + ST  V++ + DVN+ AP F+ A     +PE+  +   + +  A + D   +  + Y 
Sbjct: 312 LVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYR 370

Query: 116 IINSEATPFSLGPVDGLLRVAQKLDRE-----IKSNYTLEIKAKDRGEPSKSSRTKFFIR 170
           I    A    + P  G +    ++DRE       S Y   I A D G P  +      + 
Sbjct: 371 IWRDTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIATGTGTLLLV 430

Query: 171 LLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGING-RVRYTIISGDD-NHD 228
           LLD NDN PI + ++                 ++  D D   N       +  G   N  
Sbjct: 431 LLDVNDNAPIPEPRNMQFCQRNP-----QPHIITILDPDLPPNTSPFTAELTHGASVNWT 485

Query: 229 LTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYP 288
           +  ++      I +        +Y + ++  D         +    T+ + V D      
Sbjct: 486 IEYNDAAQESLILQPRKDLEIGEYKIHLKLADNQN------KDQVTTLDVHVCDCEGTVN 539

Query: 289 VFLHSPYLA 297
             + + +  
Sbjct: 540 NCMKAHHHH 548

>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus} Length = 550

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 11/86 (12%)

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
             EN   G       +    ++       V Y +   GA             +F +   T
Sbjct: 9   CPENE-KGEF--PKNLVQIKSNR-DKETKVFYSITGQGADKPPV-------GVFIIERET 57

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
           G + + + LDRE  A+Y+L   A+ S
Sbjct: 58  GWLKVTQPLDREAIAKYILYSHAVSS 83

>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559

 Score =  323 bits (831), Expect = e-106
 Identities = 116/411 (28%), Positives = 171/411 (41%), Gaps = 48/411 (11%)

Query: 2   NGRLEYSIVSG----DDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKR 57
           N  L YS+           IF INP +G LS  K LDRE  + ++L   A D+       
Sbjct: 31  NLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQ--- 87

Query: 58  LSSTTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDE--GQNSYVEY 114
           + +   + I + D+NDN PEF+      ++PE S   T V  + AID D+    N  + Y
Sbjct: 88  VENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRY 147

Query: 115 SIINSEATP-----FSLGPVDGLLR-VAQKLDREIKSNYTLEIKAKDRGEPSK---SSRT 165
            I++   +      F++    G +  VA  LDRE    YTL I+A D         S+  
Sbjct: 148 RILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTA 207

Query: 166 KFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGING--RVRYTIISG 223
              I + D NDN P F + ++   VPEN  V   V  ++ TD D          Y I  G
Sbjct: 208 TAVITVTDVNDNPPEFTAMTFYGEVPEN-RVDVIVANLTVTDKDQPHTPAWNAAYRISGG 266

Query: 224 DDNHDLTISEDN----GLLRIAKNLNYERKAQYSLTIQAEDCGGDTE--ERIRFDTATVS 277
           D      I  D     GL+ + K +++E    + LT+ AE+     +  +     TATVS
Sbjct: 267 DPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVS 326

Query: 278 ILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGA 337
           + V D+N+N P F  +P +    E    G    + T+ A D D       +RY       
Sbjct: 327 VTVIDVNEN-PYFAPNPKIIRQEEGLHAGTM--LTTLTAQDPDRYM-QQNIRYTK----- 377

Query: 338 SSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDRE----KQAEYLLTLQAMDS 384
                       +  +++   G I  +  LDRE    K   Y  T  A D+
Sbjct: 378 -------LSDPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDN 421

>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559

 Score =  313 bits (803), Expect = e-102
 Identities = 108/408 (26%), Positives = 157/408 (38%), Gaps = 46/408 (11%)

Query: 1   DNGRLEYSIVSGD----DEEIFTINPSNGTLSNLKH-LDRETKSSYNLVVMATDMAKPPQ 55
            NG L Y I+S         +FTIN   G +  +   LDRE    Y L++ ATDM   P 
Sbjct: 141 LNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPT 200

Query: 56  KRLSSTTQVSIVIRDVNDNAPEF-ITANETTIPENSPLNTVVAALKAIDRDEGQN--SYV 112
             LS+T    I + DVNDN PEF        +PEN   + +VA L   D+D+        
Sbjct: 201 YGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENRV-DVIVANLTVTDKDQPHTPAWNA 259

Query: 113 EYSII-NSEATPFSLGPV----DGLLRVAQKLDREIKSNYTLEIKAKDRGE------PSK 161
            Y I        F++       DGL+ V + +D E    + L + A+++           
Sbjct: 260 AYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPP 319

Query: 162 SSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTII 221
            S     + ++D N+ NP F          E +  G  +  ++A D D  +   +RYT +
Sbjct: 320 QSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKL 378

Query: 222 SGDDNHDLTISEDNGLLRIAKNLNYE----RKAQYSLTIQAEDCGGDTEERIRFDTATVS 277
           S   N  L I   NG +     L+ E    +   Y+ T  A D G          T T+ 
Sbjct: 379 SDPANW-LKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPP----MSGTGTLQ 433

Query: 278 ILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGA 337
           I + DINDN P  L  P  A   E   P      + + A D D  P  G   + L  S  
Sbjct: 434 IYLLDINDNAPQVL--PQEAETCETPEPNS----INITALDYDIDPNAGPFAFDLPLS-- 485

Query: 338 SSGNSQTQGGTGDLFRVNSTTGDI-YLLKSLDREKQAEYLLTLQAMDS 384
                         + +N   GD   L   +   +   Y + +   DS
Sbjct: 486 -------PVTIKRNWTINRLNGDFAQLNLKIKFLEAGIYEVPIIITDS 526

>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559

 Score =  236 bits (605), Expect = 4e-73
 Identities = 89/315 (28%), Positives = 135/315 (42%), Gaps = 31/315 (9%)

Query: 85  TIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-----PFSLGPVDGLLRVAQKL 139
            +PENS        L  I  D  +N  + YS+    A       F + P+ G L V + L
Sbjct: 8   NLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPL 66

Query: 140 DREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGAT 199
           DRE+ + + L   A D       +     I ++D NDN P F  + ++ SVPE    G  
Sbjct: 67  DRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTY 126

Query: 200 VLQVSATDLDD--GINGRVRYTIISGDDNHDL----TISEDNGLLR-IAKNLNYERKAQY 252
           V+ V+A D DD   +NG +RY I+S   +       TI+ + G +  +A  L+ E+  QY
Sbjct: 127 VMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQY 186

Query: 253 SLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIM 312
           +L IQA D  G+       +TAT  I V+D+NDN P F    +   V EN        + 
Sbjct: 187 TLIIQATDMEGNPTYG-LSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR---VDVIVA 242

Query: 313 TVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRV----NSTTGDIYLLKSLD 368
            +   D D  P                    + G     F +    NS  G + ++K +D
Sbjct: 243 NLTVTDKDQ-PHTPAWNAAY---------RISGGDPTGRFAILTDPNSNDGLVTVVKPID 292

Query: 369 REKQAEYLLTLQAMD 383
            E    ++LT+ A +
Sbjct: 293 FETNRMFVLTVAAEN 307

>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559

 Score =  232 bits (593), Expect = 2e-71
 Identities = 69/311 (22%), Positives = 107/311 (34%), Gaps = 25/311 (8%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSN----GTLSNLKHLDRETKSSYNLVVMATDMAKPPQK 56
                 Y I  GD    F I        G ++ +K +D ET   + L V A +     + 
Sbjct: 255 PAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKG 314

Query: 57  ---RLSSTTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYV 112
                 ST  VS+ + DVN+N P F          E     T++  L A D D      +
Sbjct: 315 IQHPPQSTATVSVTVIDVNEN-PYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNI 373

Query: 113 EYSIINSEATPFSLGPVDGLLRVAQKLDRE----IKSNYTLEIKAKDRGEPSKSSRTKFF 168
            Y+ ++  A    + PV+G +     LDRE      + Y     A D G P  S      
Sbjct: 374 RYTKLSDPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPPMSGTGTLQ 433

Query: 169 IRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGING---RVRYTIISGDD 225
           I LLD NDN P        A   E        + ++A D D   N         +     
Sbjct: 434 IYLLDINDNAPQVLP--QEAETCET--PEPNSINITALDYDIDPNAGPFAFDLPLSPVTI 489

Query: 226 NHDLTISEDNG-LLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDIN 284
             + TI+  NG   ++   + +     Y + I   D G       + + + + + V   +
Sbjct: 490 KRNWTINRLNGDFAQLNLKIKFLEAGIYEVPIIITDSGN----PPKSNISILRVKVCQCD 545

Query: 285 DNYPVFLHSPY 295
            N        +
Sbjct: 546 SNGDCTDVHHH 556

>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559

 Score =  160 bits (408), Expect = 1e-44
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 16/197 (8%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRET----KSSYNLVVMATDMAKPPQK 56
               + Y+ +S D      I+P NG ++ +  LDRE+     + YN   +A+D   PP  
Sbjct: 369 MQQNIRYTKLS-DPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPP-- 425

Query: 57  RLSSTTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSY-VEYS 115
            +S T  + I + D+NDNAP+ +   E    E    N++   + A+D D   N+    + 
Sbjct: 426 -MSGTGTLQIYLLDINDNAPQVLP-QEAETCETPEPNSIN--ITALDYDIDPNAGPFAFD 481

Query: 116 IINSEAT---PFSLGPVDG-LLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRL 171
           +  S  T    +++  ++G   ++  K+       Y + I   D G P KS+ +   +++
Sbjct: 482 LPLSPVTIKRNWTINRLNGDFAQLNLKIKFLEAGIYEVPIIITDSGNPPKSNISILRVKV 541

Query: 172 LDENDNNPIFDSKSYSA 188
              + N    D   +  
Sbjct: 542 CQCDSNGDCTDVHHHHH 558

>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus} Length = 559

 Score = 67.0 bits (164), Expect = 3e-12
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 11/86 (12%)

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
           + EN+  GP      +    +D    N  +RY +   GA    +        +F +N  +
Sbjct: 9   LPENS-RGPF--PQELVRIRSDR-DKNLSLRYSVTGPGADQPPT-------GIFIINPIS 57

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
           G + + K LDRE  A + L   A+D 
Sbjct: 58  GQLSVTKPLDRELIARFHLRAHAVDI 83

>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419

 Score =  318 bits (817), Expect = e-106
 Identities = 101/410 (24%), Positives = 162/410 (39%), Gaps = 59/410 (14%)

Query: 2   NGRLEYSIVSGDDEEIFTINPSN--------GTLSNLKHLDRETKSS------YNLVVMA 47
            G+  + +    D+E F I   N        G +   K  D E          + ++   
Sbjct: 24  EGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNM 83

Query: 48  TDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFI---TANETTIPENSPLNTVVAALKAIDR 104
              A       +   +V I+++DVND  P FI      +  +  N+P NT V  L+A D 
Sbjct: 84  GHNAGIK---YTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDP 140

Query: 105 DEGQNSYVEYSIINSEAT-PFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPS--- 160
           D   N  + Y I+       F +    G++R       ++   Y L +KA+D+       
Sbjct: 141 DTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDR 198

Query: 161 KSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTI 220
           +   T      +      P F   SY A +PEN    + ++ + A       +  +RYT+
Sbjct: 199 RFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTL 255

Query: 221 I-SGDDNHDLTISEDNGLLRIAKNLNYERKAQ---YSLTIQAEDCGGDTEERIRFDTATV 276
              G       I   +G++++AK L++E   Q   YSL + A +  G         +  +
Sbjct: 256 KAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG-----FSTSVDL 310

Query: 277 SILVSDINDNYPVFLHSPYLA-LVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDS 335
           +I V+D+NDN P F    Y A  V+E+   G S  I+ V+A D+DS   N  + Y + D 
Sbjct: 311 TIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTS--ILRVKAMDSDS-GSNAEIEYLVSDD 367

Query: 336 GASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDRE-KQAEYLLTLQAMDS 384
                           F V+S  G I   K LD +   A Y   + A D 
Sbjct: 368 ---------------HFAVDS-NGIIVNNKQLDADNNNAYYEFIVTAKDK 401

>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419

 Score =  240 bits (614), Expect = 5e-76
 Identities = 72/286 (25%), Positives = 124/286 (43%), Gaps = 21/286 (7%)

Query: 5   LEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQK-RLSSTTQ 63
           + Y IV       F ++  +G +        +    Y L V A D        R  ST +
Sbjct: 146 IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPE 205

Query: 64  VSIVIRDVNDNAPEF-ITANETTIPENSPLNTVVAALKAIDRDEGQNSY-VEYSIINSEA 121
             + I      AP+F + + E  IPEN   ++ + ++KA    + +  Y ++       A
Sbjct: 206 ERLSI-VGGKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADREIRYTLKAQG--QGA 262

Query: 122 TPFSLGPVDGLLRVAQKLDREIKSN---YTLEIKAKDRGEPSKSSRTKFFIRLLDENDNN 178
             F++GP  G++++A++LD E       Y+L + A +      S+     IR+ D NDN 
Sbjct: 263 GTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATE-DSGGFSTSVDLTIRVTDVNDNA 321

Query: 179 PIFDSKSYSA-SVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGL 237
           P F+   Y A +V E+I +G ++L+V A D D G N  + Y +          +   NG+
Sbjct: 322 PKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSDD----HFAVDS-NGI 376

Query: 238 LRIAKNLNYER-KAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
           +   K L+ +   A Y   + A+D G       +   ATV +   +
Sbjct: 377 IVNNKQLDADNNNAYYEFIVTAKDKGEPP----KSGVATVRVYTKN 418

>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419

 Score =  235 bits (601), Expect = 5e-74
 Identities = 60/318 (18%), Positives = 106/318 (33%), Gaps = 42/318 (13%)

Query: 86  IPENSPLNTVVAALKAIDRDEGQNSYVEYSIIN---------SEATPFSLGPVDGLLRVA 136
           +         +   +  + D        + +            +  P+     +G +RV 
Sbjct: 4   VTRAVRPTKRI---EFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVK 60

Query: 137 QKLDREIKSN------YTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF--DSKSYSA 188
           +K D E          + +            +   +  I + D ND  P F        A
Sbjct: 61  KKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQA 120

Query: 189 SVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYER 248
            V  N      V  + A D D   N  + Y I+         + E +G++R      ++ 
Sbjct: 121 VVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQL 178

Query: 249 KAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPS 308
             +Y L ++AED  G  ++R    T    + +       P F    Y A + EN      
Sbjct: 179 DMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSD 237

Query: 309 FRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLD 368
             I++++A        +  +RY LK  G  +G           F +  T+G + L K LD
Sbjct: 238 --IISIKAKSFA----DREIRYTLKAQGQGAG----------TFNIGPTSGIVKLAKELD 281

Query: 369 REKQAE---YLLTLQAMD 383
            E   +   Y L + A +
Sbjct: 282 FEDLRQPHVYSLIVTATE 299

>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster} Length = 419

 Score =  157 bits (398), Expect = 4e-44
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 15/181 (8%)

Query: 1   DNGRLEYSIV-SGDDEEIFTINPSNGTLSNLKHLDRETKSS---YNLVVMATDMAKPPQK 56
            +  + Y++   G     F I P++G +   K LD E       Y+L+V AT+       
Sbjct: 247 ADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATE-DSGG-- 303

Query: 57  RLSSTTQVSIVIRDVNDNAPEFITANET--TIPENSPLNTVVAALKAIDRDEGQNSYVEY 114
             S++  ++I + DVNDNAP+F   +     + E+ PL T +  +KA+D D G N+ +EY
Sbjct: 304 -FSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEY 362

Query: 115 SIINSEATPFSLGPVDGLLRVAQKLDRE-IKSNYTLEIKAKDRGEPSKSSRTKFFIRLLD 173
            + +     F++   +G++   ++LD +   + Y   + AKD+GEP KS      +   +
Sbjct: 363 LVSDD---HFAVDS-NGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGVATVRVYTKN 418

Query: 174 E 174
           +
Sbjct: 419 K 419

>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546

 Score =  320 bits (821), Expect = e-105
 Identities = 110/407 (27%), Positives = 170/407 (41%), Gaps = 44/407 (10%)

Query: 1   DNGRLEYSIVSG----DDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQK 56
              ++ YSI         + +F I    G +   + LDRE    Y L   A      P  
Sbjct: 36  RFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSP-- 93

Query: 57  RLSSTTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDE---GQNSYV 112
            +    +++I + D NDN P+F       ++ E     T V A+ A D D+     N  +
Sbjct: 94  -VEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVL 152

Query: 113 EYSIINSEATP-----FSLGPVDGLLRVAQK-LDREIKSNYTLEIKAKDRGEPSKSSRTK 166
            YSI+  +        F++    G++ +    LDRE    YTL ++A D      S   K
Sbjct: 153 SYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGK 212

Query: 167 FFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVR-YTIISGDD 225
             I++ D NDN PIFD K+Y+A VPEN  +G  V ++S TDLD       +    I  ++
Sbjct: 213 AIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNE 271

Query: 226 NHDLTISEDN----GLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVS 281
                I+ D     G+L  AK L++E + QY L I  E+    +       TATV++ V 
Sbjct: 272 GGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPT-STATVTVTVE 330

Query: 282 DINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGN 341
           D+N+  P F+ +     V+E+   G    I+++ A D D       + YF+         
Sbjct: 331 DVNEA-PFFVPAVSRVDVSEDLSRGEK--IISLVAQDPDKQQ-IQKLSYFI--------- 377

Query: 342 SQTQGGTGDLFRVNSTTGDIYLLKSLDRE----KQAEYLLTLQAMDS 384
                       VN   G +    +LDRE    K   Y + +   D 
Sbjct: 378 ---GNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDD 421

>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546

 Score =  294 bits (755), Expect = 2e-95
 Identities = 103/403 (25%), Positives = 157/403 (38%), Gaps = 47/403 (11%)

Query: 1   DNGRLEYSIVSGD----DEEIFTINPSNGTLS-NLKHLDRETKSSYNLVVMATDMAKPPQ 55
            NG L YSI+  D       +FTIN   G +S     LDRE    Y L V ATD+     
Sbjct: 148 LNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG- 206

Query: 56  KRLSSTTQVSIVIRDVNDNAPEFI-TANETTIPENSPLNTVVAALKAIDRDEGQN--SYV 112
             LS   +  I I D NDNAP F        +PEN      V  L   D D         
Sbjct: 207 --LSVEGKAIIQITDANDNAPIFDPKTYTALVPENEI-GFEVQRLSVTDLDMPGTPAWQA 263

Query: 113 EYSIINSEATPFSLGP----VDGLLRVAQKLDREIKSNYTLEIKAKD---RGEPSKSSRT 165
            Y I  +E   F++        G+L  A+ LD E++  Y L+I  ++      P  +S  
Sbjct: 264 VYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTA 323

Query: 166 KFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDD 225
              + + D N+  P F        V E++S G  ++ + A D D     ++ Y I +   
Sbjct: 324 TVTVTVEDVNEA-PFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPA 382

Query: 226 NHDLTISEDNGLLRIAKNLNYE----RKAQYSLTIQAEDCGGDTEERIRFDTATVSILVS 281
              LT+++DNG++    NL+ E    +   Y++ +   D G          T T+ + V 
Sbjct: 383 RW-LTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSV----GTGTGTLILHVL 437

Query: 282 DINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGN 341
           D+NDN PV        + ++N  P        +   DAD  P     +  L         
Sbjct: 438 DVNDNGPVPSP-RVFTMCDQNPEP------QVLTISDADIPPNTYPYKVSL--------- 481

Query: 342 SQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
             + G          + G   LL    + K+ +Y + +   D+
Sbjct: 482 --SHGSDLTWKAELDSKGTSMLLSPTQQLKKGDYSIYVLLSDA 522

>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546

 Score =  237 bits (607), Expect = 2e-73
 Identities = 81/328 (24%), Positives = 134/328 (40%), Gaps = 39/328 (11%)

Query: 75  APEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-----PFSLGP 128
             +++    + +  E  P    +  +K+   ++ + + V YSI    A       F +  
Sbjct: 5   HHDWVIPPIKVSENERGPFPKRLVQIKS---NKDRFNKVYYSITGQGADNPPQGVFRIEW 61

Query: 129 VDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSA 188
             G + V + LDRE    Y L   A            +  I ++D+NDN P F    +  
Sbjct: 62  ETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRG 121

Query: 189 SVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDL----TISEDNGLLRIA 241
           SV E +  G  V+ VSATD DD    +NG + Y+I+  D    +    TI+ + G++ + 
Sbjct: 122 SVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLI 181

Query: 242 -KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVN 300
              L+ E+  +Y+LT+QA D  G              I ++D NDN P+F    Y ALV 
Sbjct: 182 GTGLDREKFPEYTLTVQATDLEGAG----LSVEGKAIIQITDANDNAPIFDPKTYTALVP 237

Query: 301 ENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRV----NS 356
           EN      F +  +   D D              + A     + +   G  F +     S
Sbjct: 238 ENE---IGFEVQRLSVTDLDM-----------PGTPAWQAVYKIRVNEGGFFNITTDPES 283

Query: 357 TTGDIYLLKSLDREKQAEYLLTLQAMDS 384
             G +   K LD E + +Y+L +   ++
Sbjct: 284 NQGILTTAKGLDFELRKQYVLQITVENA 311

>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546

 Score =  231 bits (591), Expect = 3e-71
 Identities = 56/299 (18%), Positives = 103/299 (34%), Gaps = 22/299 (7%)

Query: 2   NGRLEYSIVSGDDEEIFTINPSN----GTLSNLKHLDRETKSSYNLVVMATDMAKPPQKR 57
                   +  ++   F I        G L+  K LD E +  Y L +   +        
Sbjct: 259 PAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPL 318

Query: 58  LSSTTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSI 116
            +ST  V++ + DVN+  P F+ A     + E+      + +L A D D+ Q   + Y I
Sbjct: 319 PTSTATVTVTVEDVNEA-PFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFI 377

Query: 117 INSEATPFSLGPVDGLLRVAQKLDREIK----SNYTLEIKAKDRGEPSKSSRTKFFIRLL 172
            N  A   ++   +G++     LDRE +    + YT+ +   D G    +      + +L
Sbjct: 378 GNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVL 437

Query: 173 DENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGING-RVRYTIISGDDNHDLTI 231
           D NDN P+   + ++               ++ +D D   N    + ++  G D      
Sbjct: 438 DVNDNGPVPSPRVFTMCDQNP-----EPQVLTISDADIPPNTYPYKVSLSHGSDLTWKAE 492

Query: 232 SEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
            +  G   +       +K  YS+ +   D               V+  V          
Sbjct: 493 LDSKGTSMLLSPTQQLKKGDYSIYVLLSDAQN------NPQLTVVNATVCSCEGKAIKC 545

>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 Length = 546

 Score =  140 bits (355), Expect = 3e-37
 Identities = 35/187 (18%), Positives = 70/187 (37%), Gaps = 16/187 (8%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETK----SSYNLVVMATDMAKPPQK 56
              +L Y I + D     T+N  NG ++   +LDRE++    ++Y ++++ TD       
Sbjct: 369 QIQKLSYFIGN-DPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSV-- 425

Query: 57  RLSSTTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYV-EYS 115
             + T  + + + DVNDN P       T   +N     +       D D   N+Y  + S
Sbjct: 426 -GTGTGTLILHVLDVNDNGPVPSPRVFTMCDQNPEPQVLTI----SDADIPPNTYPYKVS 480

Query: 116 IIN-SEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDE 174
           + + S+ T  +     G   +     +  K +Y++ +   D     + +       +   
Sbjct: 481 LSHGSDLTWKAELDSKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLTVVN--ATVCSC 538

Query: 175 NDNNPIF 181
                  
Sbjct: 539 EGKAIKC 545

>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880

 Score =  294 bits (754), Expect = 4e-92
 Identities = 103/403 (25%), Positives = 157/403 (38%), Gaps = 47/403 (11%)

Query: 1   DNGRLEYSIVSGD----DEEIFTINPSNGTLS-NLKHLDRETKSSYNLVVMATDMAKPPQ 55
            NG L YSI+  D       +FTIN   G +S     LDRE    Y L V ATD+     
Sbjct: 297 LNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG- 355

Query: 56  KRLSSTTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQ--NSYV 112
             LS   +  I I D NDNAP F        +PEN      V  L   D D         
Sbjct: 356 --LSVEGKAIIQITDANDNAPIFDPKTYTALVPENEI-GFEVQRLSVTDLDMPGTPAWQA 412

Query: 113 EYSIINSEATPFSLGPV----DGLLRVAQKLDREIKSNYTLEIKAKD---RGEPSKSSRT 165
            Y I  +E   F++        G+L  A+ LD E++  Y L+I  ++      P  +S  
Sbjct: 413 VYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTA 472

Query: 166 KFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDD 225
              + + D N+  P F        V E++S G  ++ + A D D     ++ Y I +   
Sbjct: 473 TVTVTVEDVNEA-PFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPA 531

Query: 226 NHDLTISEDNGLLRIAKNLNYE----RKAQYSLTIQAEDCGGDTEERIRFDTATVSILVS 281
              LT+++DNG++    NL+ E    +   Y++ +   D G          T T+ + V 
Sbjct: 532 RW-LTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSV----GTGTGTLILHVL 586

Query: 282 DINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGN 341
           D+NDN PV        + ++N  P        +   DAD  P     +  L         
Sbjct: 587 DVNDNGPVPSP-RVFTMCDQNPEP------QVLTISDADIPPNTYPYKVSL--------- 630

Query: 342 SQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
             + G          + G   LL    + K+ +Y + +   D+
Sbjct: 631 --SHGSDLTWKAELDSKGTSMLLSPTQQLKKGDYSIYVLLSDA 671

>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880

 Score =  269 bits (688), Expect = 1e-82
 Identities = 90/418 (21%), Positives = 154/418 (36%), Gaps = 58/418 (13%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKP------- 53
                 Y +        F + P +GT+   +H+     + + +        K        
Sbjct: 67  TRKHGLYDVGDSR----FRVLP-DGTVLVKRHVKLHKDTKFTISTWDARGIKHSTNIAVA 121

Query: 54  ------PQKRLSSTTQVSIVIRDVNDNAPEF----ITANETTIPENSPLNTVVAALKAID 103
                  ++  S ++++ ++         +            + EN         L  I 
Sbjct: 122 SKRHRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVSENER-GPFPKRLVQIK 180

Query: 104 RDEGQNSYVEYSIINSEAT-----PFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE 158
            ++ + + V YSI    A       F +    G + V + LDRE    Y L   A     
Sbjct: 181 SNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENG 240

Query: 159 PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD---GINGR 215
                  +  I ++D+NDN P F    +  SV E +  G  V+ VSATD DD    +NG 
Sbjct: 241 SPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGV 300

Query: 216 VRYTIISGDDNHDL----TISEDNGLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIR 270
           + Y+I+  D    +    TI+ + G++ +    L+ E+  +Y+LT+QA D  G       
Sbjct: 301 LSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG----L 356

Query: 271 FDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRY 330
                  I ++D NDN P+F    Y ALV EN      F +  +   D D          
Sbjct: 357 SVEGKAIIQITDANDNAPIFDPKTYTALVPENE---IGFEVQRLSVTDLDM--------- 404

Query: 331 FLKDSGASSGNSQTQGGTGDLFRVN----STTGDIYLLKSLDREKQAEYLLTLQAMDS 384
               + A     + +   G  F +     S  G +   K LD E + +Y+L +   ++
Sbjct: 405 --PGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENA 460

>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880

 Score =  210 bits (537), Expect = 3e-61
 Identities = 72/364 (19%), Positives = 126/364 (34%), Gaps = 40/364 (10%)

Query: 46  MATDMAKPPQK----RLSSTTQVSIVIRDVNDNAPEFITAN-ETTIPENS-PLNTVVAAL 99
           M +   +         L     V  +  DV+   P F +A    ++          +  +
Sbjct: 1   MGSTRLRNASVWLCGLLCLLQVVPSINADVSGCKPGFSSAEYIFSVNRRELERGRKLGKV 60

Query: 100 KAIDRDEGQNSYVEYSI----INSEATPFSLGPVDG----LLRVAQKLDREIKSNYTLEI 151
              D    ++   +       +  + T      V         ++    R IK +  + +
Sbjct: 61  NFSDCTTRKHGLYDVGDSRFRVLPDGTVLVKRHVKLHKDTKFTISTWDARGIKHSTNIAV 120

Query: 152 KAKDRGEPSKSSRTKFFIRLLDENDNNPIF-----DSKSYSASVPENISVGATVLQVSAT 206
            +K      ++      + +L   + +        D       V EN   G    ++   
Sbjct: 121 ASKRHRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVSEN-ERGPFPKRLVQI 179

Query: 207 DLDDGINGRVRYTIISGDDNHDL----TISEDNGLLRIAKNLNYERKAQYSLTIQAEDCG 262
             +     +V Y+I     ++       I  + G + + + L+ E   +Y L+  A    
Sbjct: 180 KSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSEN 239

Query: 263 GDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSL 322
           G   E    +   ++I V D NDN P F    +   V E   PG    +M V A D D  
Sbjct: 240 GSPVE----EPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQ--VMAVSATDEDDN 293

Query: 323 PF--NGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKS-LDREKQAEYLLTL 379
               NG++ Y +            +    +LF +N  TG I L+ + LDREK  EY LT+
Sbjct: 294 IDSLNGVLSYSILK-------QDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTV 346

Query: 380 QAMD 383
           QA D
Sbjct: 347 QATD 350

>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880

 Score =  139 bits (351), Expect = 4e-36
 Identities = 38/207 (18%), Positives = 74/207 (35%), Gaps = 16/207 (7%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETK----SSYNLVVMATDMAKPPQK 56
              +L Y I + D     T+N  NG ++   +LDRE++    ++Y ++++ TD       
Sbjct: 518 QIQKLSYFIGN-DPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSV-- 574

Query: 57  RLSSTTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSY-VEYS 115
             + T  + + + DVNDN P       T   +N     +       D D   N+Y  + S
Sbjct: 575 -GTGTGTLILHVLDVNDNGPVPSPRVFTMCDQNPEPQVLTI----SDADIPPNTYPYKVS 629

Query: 116 IIN-SEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDE 174
           + + S+ T  +     G   +     +  K +Y++ +   D     + +       +   
Sbjct: 630 LSHGSDLTWKAELDSKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLTVVN--ATVCSC 687

Query: 175 NDNNPIFDSKSYSASVPENISVGATVL 201
                    K         I V    +
Sbjct: 688 EGKAIKCQEKLVGGFDLPIILVILGSV 714

>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880

 Score =  131 bits (331), Expect = 1e-33
 Identities = 33/250 (13%), Positives = 73/250 (29%), Gaps = 38/250 (15%)

Query: 153 AKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPE-NISVGATVLQVSATDLDDG 211
           A                   D +   P F S  Y  SV    +  G  + +V+ +D    
Sbjct: 9   ASVWLCGLLCLLQVVPSINADVSGCKPGFSSAEYIFSVNRRELERGRKLGKVNFSDCTTR 68

Query: 212 INGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGG-------- 263
            +G           +    +  D G + + +++   +  +++++                
Sbjct: 69  KHGLYDVG------DSRFRVLPD-GTVLVKRHVKLHKDTKFTISTWDARGIKHSTNIAVA 121

Query: 264 --DTEERIRFDTATVSILVSDINDNYPVFLHS-------PYLALVNENTLPGPSFRIMTV 314
                      + +  + V    + +             P     NE            +
Sbjct: 122 SKRHRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVSENERGPFP-----KRL 176

Query: 315 QAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAE 374
               ++       V Y +   GA +           +FR+   TG + + + LDRE+  +
Sbjct: 177 VQIKSNK-DRFNKVYYSITGQGADNPPQ-------GVFRIEWETGWMLVTRPLDREEYDK 228

Query: 375 YLLTLQAMDS 384
           Y+L+  A+  
Sbjct: 229 YVLSSHAVSE 238

>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A* Length = 880

 Score = 53.3 bits (128), Expect = 8e-08
 Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 5/97 (5%)

Query: 3   GRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTT 62
              + S+  G D        S GT   L    +  K  Y++ V+ +D    PQ      T
Sbjct: 624 YPYKVSLSHGSDLTWKAELDSKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQ-----LT 678

Query: 63  QVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAAL 99
            V+  +      A +              L  + + L
Sbjct: 679 VVNATVCSCEGKAIKCQEKLVGGFDLPIILVILGSVL 715

>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322

 Score =  272 bits (697), Expect = 1e-89
 Identities = 100/293 (34%), Positives = 147/293 (50%), Gaps = 17/293 (5%)

Query: 2   NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
           + +++Y +       IF IN   G +  +K LDRE K+ Y L   A D        L   
Sbjct: 32  SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNKP--LEPP 89

Query: 62  TQVSIVIRDVNDNAPEF-ITANETTIPENSPLNTVVAALKAIDRDE---GQNSYVEYSII 117
           ++  I ++D+NDNAPEF       T+PE S L T V  + A D D+   G ++ + YSI+
Sbjct: 90  SEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSIL 149

Query: 118 NSEATPFSLGPVDGLLRVAQK-LDREIKSNYTLEIKAKDRG--EPSKSSRTKFFIRLLDE 174
             +   FS+ P   +++ A   +DRE K  Y + I+AKD G      S  T   + L D 
Sbjct: 150 EGQ-PYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDV 208

Query: 175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISED 234
           NDN P F    Y  SVPE++ +G  + +V A D D G N +  Y II GD      I+ D
Sbjct: 209 NDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSD 268

Query: 235 ----NGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRF---DTATVSILV 280
               +G++R+ K L++E K  Y+L ++A +   D     R    DTATV I+V
Sbjct: 269 AQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRFSSRGPFKDTATVKIVV 321

>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322

 Score =  251 bits (643), Expect = 2e-81
 Identities = 90/310 (29%), Positives = 147/310 (47%), Gaps = 29/310 (9%)

Query: 85  TIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA-TPFSLGPVDGLLRVAQKLDREI 143
            + E S    ++      D D G +  ++Y +    A T F +  + G +   ++LDRE 
Sbjct: 9   VLEEFSGPEPILVGRLHTDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREE 67

Query: 144 KSNYTLEIKAKDR-GEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQ 202
           K+ YTL  +A D          ++F I++ D NDN P F +  Y A+VPE   +G +V  
Sbjct: 68  KAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTN 127

Query: 203 VSATDLDD---GINGRVRYTIISGDDNHDLTISEDNGLLRIA-KNLNYERKAQYSLTIQA 258
           V+ATD DD   G + ++ Y+I+ G      +I  +  +++ A  N++ E K +Y + IQA
Sbjct: 128 VTATDADDPVYGNSAKLVYSILEGQP--YFSIEPETAIIKTALPNMDREAKEEYLVVIQA 185

Query: 259 EDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHD 318
           +D GG +       T T+++ ++D+NDN P F  S Y   V E+ + G +  I  V+A+D
Sbjct: 186 KDMGGHSGGL--SGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTA--IGRVKAND 241

Query: 319 ADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRV----NSTTGDIYLLKSLDREKQAE 374
            D    N    Y +             G    LF +     +  G I L K LD E +  
Sbjct: 242 QDI-GENAQSSYDI-----------IDGDGTALFEITSDAQAQDGVIRLRKPLDFETKKS 289

Query: 375 YLLTLQAMDS 384
           Y L ++A + 
Sbjct: 290 YTLKVEAANI 299

>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322

 Score =  163 bits (414), Expect = 2e-47
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)

Query: 179 PIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLL 238
            ++   +    + E       ++    TDLD G + +++Y +          I++  G +
Sbjct: 2   WVW---NQMFVLEEFSGPEPILVGRLHTDLDPG-SKKIKYILSGDGAGTIFQINDITGDI 57

Query: 239 RIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLAL 298
              K L+ E KA+Y+LT QA D   +   +     +   I V DINDN P FL+ PY A 
Sbjct: 58  HAIKRLDREEKAEYTLTAQAVDFETN---KPLEPPSEFIIKVQDINDNAPEFLNGPYHAT 114

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPF--NGLVRYFLKDSGASSGNSQTQGGTGDLFRVNS 356
           V E ++ G S  +  V A DAD   +  +  + Y + +                 F +  
Sbjct: 115 VPEMSILGTS--VTNVTATDADDPVYGNSAKLVYSILEG-------------QPYFSIEP 159

Query: 357 TTGDIY-LLKSLDREKQAEYLLTLQAMD 383
            T  I   L ++DRE + EYL+ +QA D
Sbjct: 160 ETAIIKTALPNMDREAKEEYLVVIQAKD 187

>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322

 Score =  157 bits (399), Expect = 3e-45
 Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 10/175 (5%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSNGTLS-NLKHLDRETKSSYNLVVMATDMAKPPQKRLS 59
           ++ +L YSI+ G     F+I P    +   L ++DRE K  Y +V+ A DM       LS
Sbjct: 140 NSAKLVYSILEGQP--YFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSG-GLS 196

Query: 60  STTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIIN 118
            TT +++ + DVNDN P+F  +    ++PE+  L T +  +KA D+D G+N+   Y II+
Sbjct: 197 GTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIID 256

Query: 119 S-EATPFSL----GPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFF 168
                 F +       DG++R+ + LD E K +YTL+++A +     + S    F
Sbjct: 257 GDGTALFEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRFSSRGPF 311

>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322

 Score = 71.2 bits (175), Expect = 6e-14
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 18/97 (18%)

Query: 288 PVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGG 347
            V+     + ++ E + P P   ++     D D    +  ++Y L   GA          
Sbjct: 2   WVW---NQMFVLEEFSGPEPI--LVGRLHTDLDP--GSKKIKYILSGDGA---------- 44

Query: 348 TGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
            G +F++N  TGDI+ +K LDRE++AEY LT QA+D 
Sbjct: 45  -GTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDF 80

>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus} Length = 322

 Score = 70.4 bits (173), Expect = 9e-14
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 1   DNGRLEYSIVSGDDEEIFTI----NPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQK 56
           +N +  Y I+ GD   +F I       +G +   K LD ETK SY L V A ++   P+ 
Sbjct: 246 ENAQSSYDIIDGDGTALFEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRF 305

Query: 57  R----LSSTTQVSIVI 68
                   T  V IV+
Sbjct: 306 SSRGPFKDTATVKIVV 321

>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316

 Score =  243 bits (623), Expect = 1e-78
 Identities = 72/311 (23%), Positives = 125/311 (40%), Gaps = 38/311 (12%)

Query: 1   DNGRLEYSIVSGDDEEIFTIN--------PSNGTLSNLKHLDRETKSS------YNLVVM 46
             G+  + +    D+E F I          +NG +   K  D E          + ++  
Sbjct: 18  TEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITN 77

Query: 47  ATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFI---TANETTIPENSPLNTVVAALKAID 103
               A       +   +V I+++DVND  P FI      +  +  N+P NT V  L+A D
Sbjct: 78  MGHNAGIK---YTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARD 134

Query: 104 RDEGQNSYVEYSII-NSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEP--- 159
            D   N  + Y I+ +     F +    G++R       ++   Y L +KA+D+      
Sbjct: 135 PDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDD 192

Query: 160 SKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYT 219
            +   T      +      P F   SY A +PEN    + ++ + A       +  +RYT
Sbjct: 193 RRFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYT 249

Query: 220 II-SGDDNHDLTISEDNGLLRIAKNLNYERKAQ---YSLTIQAEDCGGDTEERIRFDTAT 275
           +   G       I   +G++++AK L++E   Q   YSL + A +  G         +  
Sbjct: 250 LKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG-----FSTSVD 304

Query: 276 VSILVSDINDN 286
           ++I V+D+NDN
Sbjct: 305 LTIRVTDVNDN 315

>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316

 Score =  243 bits (622), Expect = 1e-78
 Identities = 60/309 (19%), Positives = 107/309 (34%), Gaps = 39/309 (12%)

Query: 96  VAALKAIDRDEGQNSYVEYSIIN---------SEATPFSLGPVDGLLRVAQKLDREIKSN 146
              ++  + D        + +            +  P+     +G +RV +K D E    
Sbjct: 6   TKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGP 65

Query: 147 ------YTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKS--YSASVPENISVGA 198
                 + +            +   +  I + D ND  P F ++     A V  N     
Sbjct: 66  EKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNT 125

Query: 199 TVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQA 258
            V  + A D D   N  + Y I+         + E +G++R      ++   +Y L ++A
Sbjct: 126 PVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKA 183

Query: 259 EDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHD 318
           ED  G  ++R    T    + +       P F    Y A + EN        I++++A  
Sbjct: 184 EDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSD--IISIKAKS 240

Query: 319 ADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAE---Y 375
                 +  +RY LK  G  +G           F +  T+G + L K LD E   +   Y
Sbjct: 241 FA----DREIRYTLKAQGQGAG----------TFNIGPTSGIVKLAKELDFEDLRQPHVY 286

Query: 376 LLTLQAMDS 384
            L + A + 
Sbjct: 287 SLIVTATED 295

>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316

 Score =  145 bits (367), Expect = 1e-40
 Identities = 44/205 (21%), Positives = 73/205 (35%), Gaps = 36/205 (17%)

Query: 195 SVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDN--------GLLRIAKNLNY 246
           S      ++  T+ D    G+  + +    D     I +DN        G +R+ K  +Y
Sbjct: 1   SAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDY 60

Query: 247 ERKAQ------YSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSP--YLAL 298
           E          + +        G        D   V ILV D+ND  P F++ P    A+
Sbjct: 61  EELGPEKTIDFWVIITNMGHNAGIK----YTDNQRVIILVKDVNDEPPYFINRPLPMQAV 116

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
           V  N  P     + T+QA D               D+  +      +  TG  F V+  +
Sbjct: 117 VQLNAPPN--TPVFTLQARDP--------------DTDHNIHYFIVRDRTGGRFEVDERS 160

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMD 383
           G +    +   +   EY+L ++A D
Sbjct: 161 GVVRTRGTDLFQLDMEYVLYVKAED 185

>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A Length = 316

 Score = 81.7 bits (202), Expect = 1e-17
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 8/79 (10%)

Query: 1   DNGRLEYSIV-SGDDEEIFTINPSNGTLSNLKHLDRETKSS---YNLVVMATDMAKPPQK 56
            +  + Y++   G     F I P++G +   K LD E       Y+L+V AT+ +     
Sbjct: 242 ADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG--- 298

Query: 57  RLSSTTQVSIVIRDVNDNA 75
             S++  ++I + DVNDNA
Sbjct: 299 -FSTSVDLTIRVTDVNDNA 316

>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210

 Score =  210 bits (538), Expect = 3e-67
 Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 15/219 (6%)

Query: 72  NDNAPEFITA---NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-PFSLG 127
            +  P F          I E++P+ + V  L A D D     +    +   EA+  F++ 
Sbjct: 2   VNRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDNDPLVF---GVSGEEASRFFAVE 58

Query: 128 PVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYS 187
           P  G++ + Q LDRE KS +T+E    D          K  I++ D NDN P F ++ YS
Sbjct: 59  PDTGVVWLRQPLDRETKSEFTVEFSVSDHQ---GVITRKVNIQVGDVNDNAPTFHNQPYS 115

Query: 188 ASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYE 247
             +PEN  VG  +  V+ATD D G  G V Y+           I    G++ + + L+YE
Sbjct: 116 VRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSP--FFAIDSARGIVTVIQELDYE 173

Query: 248 RKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDN 286
               Y LT+ A D             A ++I+++D+ D 
Sbjct: 174 VTQAYQLTVNATDQDKTRP---LSTLANLAIIITDMQDM 209

>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210

 Score =  190 bits (484), Expect = 3e-59
 Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 28/212 (13%)

Query: 174 ENDNNPIFDSKSYSAS--VPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTI 231
           + +  P F +  +     + E+  VG++V Q+ A D+D   N  + + +   + +    +
Sbjct: 1   QVNRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMD---NDPLVFGVSGEEASRFFAV 57

Query: 232 SEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFL 291
             D G++ + + L+ E K+++++     D  G         T  V+I V D+NDN P F 
Sbjct: 58  EPDTGVVWLRQPLDRETKSEFTVEFSVSDHQG-------VITRKVNIQVGDVNDNAPTFH 110

Query: 292 HSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDL 351
           + PY   + ENT  G    I  V A D D     G V Y  +                  
Sbjct: 111 NQPYSVRIPENTPVGTP--IFIVNATDPDLGA-GGSVLYSFQPPS-------------PF 154

Query: 352 FRVNSTTGDIYLLKSLDREKQAEYLLTLQAMD 383
           F ++S  G + +++ LD E    Y LT+ A D
Sbjct: 155 FAIDSARGIVTVIQELDYEVTQAYQLTVNATD 186

>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 2wcp_A 2whv_A 2wd0_A 2wbx_A Length = 210

 Score =  185 bits (471), Expect = 3e-57
 Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 9/180 (5%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
           DN  L + +   +    F + P  G +   + LDRETKS + +    +D           
Sbjct: 38  DNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGV------I 91

Query: 61  TTQVSIVIRDVNDNAPEF-ITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS 119
           T +V+I + DVNDNAP F        IPEN+P+ T +  + A D D G    V YS    
Sbjct: 92  TRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP 151

Query: 120 EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSK-SSRTKFFIRLLDENDNN 178
               F++    G++ V Q+LD E+   Y L + A D+ +    S+     I + D  D +
Sbjct: 152 SPF-FAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210

>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215

 Score =  194 bits (495), Expect = 1e-60
 Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 11/210 (5%)

Query: 85  TIPENSPLNTVVAALKAIDRDEGQNSYVEYSII-NSEATPFSLGPVDGLLRVAQKLDREI 143
            I E +  + V+      D D G +  ++Y +      T F +    G +   + LDRE 
Sbjct: 10  VIEEYTGPDPVLVGRLHSDIDSG-DGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREE 68

Query: 144 KSNYTLEIKAKDRGEP-SKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQ 202
           ++ YTL  +A DR         ++F +++ D NDN P F  + Y A+VPE  +VG +V+Q
Sbjct: 69  RAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQ 128

Query: 203 VSATDLDD---GINGRVRYTIISGDDNHDLTISEDNGLLRIA-KNLNYERKAQYSLTIQA 258
           V+A+D DD   G + ++ Y+I+ G      ++    G++R A  N++ E K +Y + IQA
Sbjct: 129 VTASDADDPTYGNSAKLVYSILEGQPY--FSVEAQTGIIRTALPNMDREAKEEYHVVIQA 186

Query: 259 EDCGGDTEERIRFDTATVSILVSDINDNYP 288
           +D GG         T  V+I ++D   +  
Sbjct: 187 KDMGGHMGG--LSGTTKVTITLTDDYKDDD 214

>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215

 Score =  178 bits (454), Expect = 1e-54
 Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 10/185 (5%)

Query: 2   NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
           +G ++Y +       IF I+  +G +   K LDRE ++ Y L+  A D        L   
Sbjct: 33  DGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTNRP--LEPP 90

Query: 62  TQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDE---GQNSYVEYSII 117
           ++  + ++D+NDN PEF+       +PE S + T V  + A D D+   G ++ + YSI+
Sbjct: 91  SEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSIL 150

Query: 118 NSEATPFSLGPVDGLLRVAQK-LDREIKSNYTLEIKAKDRG--EPSKSSRTKFFIRLLDE 174
             +   FS+    G++R A   +DRE K  Y + I+AKD G      S  TK  I L D+
Sbjct: 151 EGQ-PYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDD 209

Query: 175 NDNNP 179
             ++ 
Sbjct: 210 YKDDD 214

>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215

 Score =  169 bits (429), Expect = 5e-51
 Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 22/202 (10%)

Query: 185 SYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNL 244
           +    + E       ++    +D+D G +G ++Y +          I + +G +   K L
Sbjct: 6   NQFFVIEEYTGPDPVLVGRLHSDIDSG-DGNIKYILSGEGAGTIFVIDDKSGNIHATKTL 64

Query: 245 NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTL 304
           + E +AQY+L  QA D   +   R     +   + V DINDN P FLH  Y A V E + 
Sbjct: 65  DREERAQYTLMAQAVDRDTN---RPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSN 121

Query: 305 PGPSFRIMTVQAHDADSLPF--NGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIY 362
            G S  ++ V A DAD   +  +  + Y +       G           F V + TG I 
Sbjct: 122 VGTS--VIQVTASDADDPTYGNSAKLVYSI-----LEGQ--------PYFSVEAQTGIIR 166

Query: 363 L-LKSLDREKQAEYLLTLQAMD 383
             L ++DRE + EY + +QA D
Sbjct: 167 TALPNMDREAKEEYHVVIQAKD 188

>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215

 Score = 91.6 bits (228), Expect = 9e-22
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSNGTLS-NLKHLDRETKSSYNLVVMATDMAKPPQKRLS 59
           ++ +L YSI+ G     F++    G +   L ++DRE K  Y++V+ A DM       LS
Sbjct: 141 NSAKLVYSILEGQP--YFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGG-LS 197

Query: 60  STTQVSIVIRDVNDNAPE 77
            TT+V+I + D   +  +
Sbjct: 198 GTTKVTITLTDDYKDDDK 215

>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus} Length = 215

 Score = 78.5 bits (194), Expect = 3e-17
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 15/91 (16%)

Query: 294 PYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFR 353
               ++ E T P P    +     D DS   +G ++Y L   GA           G +F 
Sbjct: 6   NQFFVIEEYTGPDPVL--VGRLHSDIDSG--DGNIKYILSGEGA-----------GTIFV 50

Query: 354 VNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
           ++  +G+I+  K+LDRE++A+Y L  QA+D 
Sbjct: 51  IDDKSGNIHATKTLDREERAQYTLMAQAVDR 81

>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215

 Score =  194 bits (494), Expect = 1e-60
 Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 14/213 (6%)

Query: 82  NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSII-----NSEATPFSLGPVDGLLRVA 136
               +PENS        L  I  D  +N  + YS+            F + P+ G L V 
Sbjct: 5   PPINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVT 63

Query: 137 QKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISV 196
           + LDRE+ + + L   A D       +     I ++D NDN P F  + ++ SVPE    
Sbjct: 64  KPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKP 123

Query: 197 GATVLQVSATDLDD--GINGRVRYTIISGDDNHDL----TISEDNGLLR-IAKNLNYERK 249
           G  V+ V+A D DD   +NG +RY I+S   +       TI+ + G +  +A  L+ E+ 
Sbjct: 124 GTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKV 183

Query: 250 AQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
            QY+L IQA D  G+       +TAT  I V+D
Sbjct: 184 QQYTLIIQATDMEGNPTYG-LSNTATAVITVTD 215

>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215

 Score =  160 bits (407), Expect = 8e-48
 Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 20/201 (9%)

Query: 189 SVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDL----TISEDNGLLRIAKNL 244
           ++PEN S G    ++     D   N  +RY++     +        I+  +G L + K L
Sbjct: 8   NLPEN-SRGPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPL 66

Query: 245 NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTL 304
           + E  A++ L   A D  G        +   + I V D+NDN P FLH  +   V E + 
Sbjct: 67  DRELIARFHLRAHAVDING----NQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSK 122

Query: 305 PGPSFRIMTVQAHDADSLP-FNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYL 363
           PG    +MTV A DAD     NG++RY +      S    T     ++F +N+ TGDI  
Sbjct: 123 PGTY--VMTVTAIDADDPNALNGMLRYRI-----LSQAPSTPS--PNMFTINNETGDIIT 173

Query: 364 L-KSLDREKQAEYLLTLQAMD 383
           +   LDREK  +Y L +QA D
Sbjct: 174 VAAGLDREKVQQYTLIIQATD 194

>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215

 Score =  152 bits (387), Expect = 8e-45
 Identities = 55/189 (29%), Positives = 81/189 (42%), Gaps = 19/189 (10%)

Query: 1   DNGRLEYSIVSG----DDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQK 56
            N  L YS+           IF INP +G LS  K LDRE  + ++L   A D+      
Sbjct: 30  KNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQ-- 87

Query: 57  RLSSTTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDE--GQNSYVE 113
            + +   + I + D+NDN PEF+      ++PE S   T V  + AID D+    N  + 
Sbjct: 88  -VENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLR 146

Query: 114 YSIINSEATP-----FSLGPVDGLLRVAQK-LDREIKSNYTLEIKAKDRGEPSK---SSR 164
           Y I++   +      F++    G +      LDRE    YTL I+A D         S+ 
Sbjct: 147 YRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNT 206

Query: 165 TKFFIRLLD 173
               I + D
Sbjct: 207 ATAVITVTD 215

>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A Length = 215

 Score = 68.5 bits (168), Expect = 1e-13
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 11/86 (12%)

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
           + EN+  GP      +    +D    N  +RY +   GA             +F +N  +
Sbjct: 9   LPENS-RGPF--PQELVRIRSDR-DKNLSLRYSVTGPGA-------DQPPTGIFIINPIS 57

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
           G + + K LDRE  A + L   A+D 
Sbjct: 58  GQLSVTKPLDRELIARFHLRAHAVDI 83

>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213

 Score =  192 bits (490), Expect = 4e-60
 Identities = 62/214 (28%), Positives = 90/214 (42%), Gaps = 18/214 (8%)

Query: 82  NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSII-----NSEATPFSLGPVDGLLRVA 136
              + PEN         L  I  +  + + V YSI            F +    G L+V 
Sbjct: 5   AAISCPENEK-GEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVT 63

Query: 137 QKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISV 196
           Q LDRE  + Y L   A      +     +  I + D+NDN P F  + +  SV E    
Sbjct: 64  QPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVP 123

Query: 197 GATVLQVSATDLDDGI---NGRVRYTIISGDDNHDL----TISEDNGLLRIA-KNLNYER 248
           G +V++VSATD DD +   N  + YTI+S D         T++ D G++ +    L+ E 
Sbjct: 124 GTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRES 183

Query: 249 KAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
              Y+L +QA D  G+        TA   I V D
Sbjct: 184 YPTYTLVVQAADLQGEG----LSTTAKAVITVKD 213

>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213

 Score =  162 bits (411), Expect = 3e-48
 Identities = 57/205 (27%), Positives = 83/205 (40%), Gaps = 21/205 (10%)

Query: 186 YSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDL----TISEDNGLLRIA 241
            + S PEN   G     +     +     +V Y+I     +        I  + G L++ 
Sbjct: 5   AAISCPEN-EKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVT 63

Query: 242 KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301
           + L+ E  A+Y L   A    G        D   + I V+D NDN P F    +   V E
Sbjct: 64  QPLDREAIAKYILYSHAVSSNG----EAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 119

Query: 302 NTLPGPSFRIMTVQAHDADS--LPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTG 359
             +PG S  +M V A DAD     +N  + Y +        +   +    ++F VN  TG
Sbjct: 120 GAVPGTS--VMKVSATDADDDVNTYNAAIAYTIV-------SQDPELPHKNMFTVNRDTG 170

Query: 360 DIYLLKS-LDREKQAEYLLTLQAMD 383
            I +L S LDRE    Y L +QA D
Sbjct: 171 VISVLTSGLDRESYPTYTLVVQAAD 195

>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213

 Score =  157 bits (399), Expect = 1e-46
 Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 17/186 (9%)

Query: 2   NGRLEYSIVSG----DDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKR 57
             ++ YSI           +F I    G L   + LDRE  + Y L   A          
Sbjct: 31  ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEA--- 87

Query: 58  LSSTTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEG---QNSYVE 113
           +    ++ I + D NDN PEF     E ++ E +   T V  + A D D+     N+ + 
Sbjct: 88  VEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIA 147

Query: 114 YSIINSEATP-----FSLGPVDGLLRVAQK-LDREIKSNYTLEIKAKDRGEPSKSSRTKF 167
           Y+I++ +        F++    G++ V    LDRE    YTL ++A D      S+  K 
Sbjct: 148 YTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKA 207

Query: 168 FIRLLD 173
            I + D
Sbjct: 208 VITVKD 213

>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213

 Score = 75.5 bits (186), Expect = 4e-16
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)

Query: 1   DNGRLEYSIVSGDDE----EIFTINPSNGTLS-NLKHLDRETKSSYNLVVMATDMAKPPQ 55
            N  + Y+IVS D E     +FT+N   G +S     LDRE+  +Y LVV A D+     
Sbjct: 142 YNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEG- 200

Query: 56  KRLSSTTQVSIVIRD 70
             LS+T +  I ++D
Sbjct: 201 --LSTTAKAVITVKD 213

>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A Length = 213

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 11/93 (11%)

Query: 292 HSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDL 351
                    EN   G       +    ++       V Y +   GA             +
Sbjct: 2   WVIAAISCPENE-KGEF--PKNLVQIKSNR-DKETKVFYSITGQGADKPPV-------GV 50

Query: 352 FRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
           F +   TG + + + LDRE  A+Y+L   A+ S
Sbjct: 51  FIIERETGWLKVTQPLDREAIAKYILYSHAVSS 83

>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207

 Score =  184 bits (470), Expect = 3e-57
 Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 11/211 (5%)

Query: 78  FITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA-TPFSLGPVDGLLRVA 136
           ++      + E +  +         D+D G  S ++Y +    A   F +    G ++  
Sbjct: 2   WMANQFFLLEEYTGSDYQYVGKLHSDQDRGDGS-LKYILSGDGAGDLFIINENTGDIQAT 60

Query: 137 QKLDREIKSNYTLEIKAKDRG-EPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENIS 195
           ++LDRE K  Y L  +A +R         ++F I++ D NDN PIF    Y+A+VPE   
Sbjct: 61  KRLDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMAD 120

Query: 196 VGATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISEDNGLLRIA-KNLNYERKAQ 251
           VG  V+QV+ATD DD   G + +V Y+I+ G      ++  + G+++ A  N++ E + Q
Sbjct: 121 VGTFVVQVTATDADDPTYGNSAKVVYSILQGQP--YFSVESETGIIKTALLNMDRENREQ 178

Query: 252 YSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
           Y + IQA+D GG         T TV+I ++D
Sbjct: 179 YQVVIQAKDMGGQMGG--LSGTTTVNITLTD 207

>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207

 Score =  166 bits (422), Expect = 6e-50
 Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 22/202 (10%)

Query: 185 SYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNL 244
           +    + E        +    +D D G +G ++Y +          I+E+ G ++  K L
Sbjct: 5   NQFFLLEEYTGSDYQYVGKLHSDQDRG-DGSLKYILSGDGAGDLFIINENTGDIQATKRL 63

Query: 245 NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTL 304
           + E K  Y L  QA +       R     +   I + DINDN P+F    Y A V E   
Sbjct: 64  DREEKPVYILRAQAVNRRT---GRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMAD 120

Query: 305 PGPSFRIMTVQAHDADSLPF--NGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIY 362
            G    ++ V A DAD   +  +  V Y +       G           F V S TG I 
Sbjct: 121 VGTF--VVQVTATDADDPTYGNSAKVVYSI-----LQGQ--------PYFSVESETGIIK 165

Query: 363 L-LKSLDREKQAEYLLTLQAMD 383
             L ++DRE + +Y + +QA D
Sbjct: 166 TALLNMDRENREQYQVVIQAKD 187

>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207

 Score =  165 bits (421), Expect = 7e-50
 Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 2   NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
           +G L+Y +      ++F IN + G +   K LDRE K  Y L   A +        +   
Sbjct: 32  DGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTGRP--VEPE 89

Query: 62  TQVSIVIRDVNDNAPEFI-TANETTIPENSPLNTVVAALKAIDRDE---GQNSYVEYSII 117
           ++  I I D+NDN P F       T+PE + + T V  + A D D+   G ++ V YSI+
Sbjct: 90  SEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSIL 149

Query: 118 NSEATPFSLGPVDGLLRVAQK-LDREIKSNYTLEIKAKDRGEP--SKSSRTKFFIRLLD 173
             +   FS+    G+++ A   +DRE +  Y + I+AKD G      S  T   I L D
Sbjct: 150 QGQ-PYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207

>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207

 Score = 78.9 bits (195), Expect = 2e-17
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 15/92 (16%)

Query: 293 SPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLF 352
           +    L+ E T     +  +     D D    +G ++Y L   GA           GDLF
Sbjct: 4   ANQFFLLEEYTGSDYQY--VGKLHSDQDRG--DGSLKYILSGDGA-----------GDLF 48

Query: 353 RVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
            +N  TGDI   K LDRE++  Y+L  QA++ 
Sbjct: 49  IINENTGDIQATKRLDREEKPVYILRAQAVNR 80

>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus} Length = 207

 Score = 77.7 bits (192), Expect = 7e-17
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSNGTLS-NLKHLDRETKSSYNLVVMATDMAKPPQKRLS 59
           ++ ++ YSI+ G     F++    G +   L ++DRE +  Y +V+ A DM       LS
Sbjct: 140 NSAKVVYSILQGQP--YFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGG-LS 196

Query: 60  STTQVSIVIRD 70
            TT V+I + D
Sbjct: 197 GTTTVNITLTD 207

>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218

 Score =  179 bits (455), Expect = 9e-55
 Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 16/212 (7%)

Query: 85  TIPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-PFSLGPVDGLLRVAQKLDR 141
            IPEN   P    V  +   DR EG    +    ++ +    F +    G + V + LDR
Sbjct: 9   LIPENQRQPFPRDVGKVVDSDRPEGSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDR 68

Query: 142 EIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVL 201
           E  + Y L ++  D    +        + ++D+NDN PIF    Y   V E    G TV+
Sbjct: 69  ETIATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVM 128

Query: 202 QVSATDLDD--GINGRVRYTIISGDDNHDL----TISEDNGLLRIAK---NLNYER--KA 250
           +++A D DD    N  +RY I     +        I  + G +        L+ E     
Sbjct: 129 RMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENP 188

Query: 251 QYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
           +Y L I+A+D  G         TAT +I++ D
Sbjct: 189 KYELIIEAQDMAGLDVG--LTGTATATIVIDD 218

>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218

 Score =  168 bits (427), Expect = 1e-50
 Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 21/207 (10%)

Query: 186 YSASVPEN--ISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKN 243
               +PEN        V +V  +D  +G   R+    +  D      I+E+ G + + + 
Sbjct: 6   SPILIPENQRQPFPRDVGKVVDSDRPEGSKFRLTGKGVDQDPKGTFRINENTGSVSVTRT 65

Query: 244 LNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENT 303
           L+ E  A Y L ++  D  G    +       + ++V D NDN P+F   PY+  V E +
Sbjct: 66  LDRETIATYQLYVETTDASG----KTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGS 121

Query: 304 LPGPSFRIMTVQAHDADSLP-FNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIY 362
             G +  +M + A DAD     N L+RY ++              + ++F ++   GDI 
Sbjct: 122 PTGTT--VMRMTAFDADDPATDNALLRYNIR-------QQTPDKPSPNMFYIDPEKGDIV 172

Query: 363 LLKS---LDRE--KQAEYLLTLQAMDS 384
            + S   LDRE  +  +Y L ++A D 
Sbjct: 173 TVVSPALLDRETLENPKYELIIEAQDM 199

>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218

 Score =  148 bits (376), Expect = 3e-43
 Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 18/187 (9%)

Query: 2   NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
             RL    V  D +  F IN + G++S  + LDRET ++Y L V  TD +      L   
Sbjct: 35  KFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKT---LEGP 91

Query: 62  TQVSIVIRDVNDNAPEFI-TANETTIPENSPLNTVVAALKAIDRDE--GQNSYVEYSIIN 118
             + +++ D NDN P F        + E SP  T V  + A D D+    N+ + Y+I  
Sbjct: 92  VPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQ 151

Query: 119 SEATP-----FSLGPVDGLLRVAQ---KLDREIKSN--YTLEIKAKDRG--EPSKSSRTK 166
                     F + P  G +        LDRE   N  Y L I+A+D    +   +    
Sbjct: 152 QTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTAT 211

Query: 167 FFIRLLD 173
             I + D
Sbjct: 212 ATIVIDD 218

>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A Length = 218

 Score = 67.0 bits (164), Expect = 4e-13
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 10/79 (12%)

Query: 1   DNGRLEYSIVSGDDE----EIFTINPSNG---TLSNLKHLDRET--KSSYNLVVMATDMA 51
           DN  L Y+I     +     +F I+P  G   T+ +   LDRET     Y L++ A DMA
Sbjct: 141 DNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMA 200

Query: 52  KPPQKRLSSTTQVSIVIRD 70
                 L+ T   +IVI D
Sbjct: 201 GLD-VGLTGTATATIVIDD 218

>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203

 Score =  175 bits (447), Expect = 7e-54
 Identities = 66/208 (31%), Positives = 97/208 (46%), Gaps = 16/208 (7%)

Query: 82  NETTIPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSEA-TPFSLGPVDGLLRVAQK 138
           N   I E    PL   V  L +       N    Y I    A T F +   DG +   ++
Sbjct: 5   NRMHIREEIDSPLPHHVGKLTSSV----GNKNAMYIIEGESANTIFKVQGYDGDIYAFER 60

Query: 139 LDREIKSNYTLEIKAKDR-GEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVG 197
           LDRE K+ Y L     DR    S    +KF I++ D NDN PIF  K ++ SVPE   +G
Sbjct: 61  LDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLG 120

Query: 198 ATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSL 254
            +V +V+A D DD     +  V Y II G++    T+ +   +     +L+ E ++ Y +
Sbjct: 121 TSVTKVTAEDADDPTVAGHATVTYQIIKGNE--YFTVDDSGVIFTARADLDRESQSAYEI 178

Query: 255 TIQAEDCGGDTEERIRFDTATVSILVSD 282
            ++A+D  G T       TATV I ++D
Sbjct: 179 IVKAKDALGLTG---ESSTATVIIRLTD 203

>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203

 Score =  170 bits (432), Expect = 2e-51
 Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 8/178 (4%)

Query: 1   DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
            N    Y I       IF +   +G +   + LDRE K+ Y L     D        L  
Sbjct: 29  GNKNAMYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNRS--LEP 86

Query: 61  TTQVSIVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDE---GQNSYVEYSI 116
            ++  I + D+NDNAP F+      ++PE S L T V  + A D D+     ++ V Y I
Sbjct: 87  PSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQI 146

Query: 117 INSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDR-GEPSKSSRTKFFIRLLD 173
           I      F++     +      LDRE +S Y + +KAKD  G   +SS     IRL D
Sbjct: 147 IKGN-EYFTVDDSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203

>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203

 Score =  158 bits (402), Expect = 4e-47
 Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 26/199 (13%)

Query: 189 SVPENI--SVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNY 246
            + E I   +   V +++++      N    Y I     N    +   +G +   + L+ 
Sbjct: 8   HIREEIDSPLPHHVGKLTSSV----GNKNAMYIIEGESANTIFKVQGYDGDIYAFERLDR 63

Query: 247 ERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPG 306
           E+KA+Y LT    D   +   R     +   I VSDINDN P+F+   +   V E +  G
Sbjct: 64  EKKAEYELTAHIIDRRNN---RSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLG 120

Query: 307 PSFRIMTVQAHDADSLPF--NGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLL 364
            S  +  V A DAD      +  V Y +       GN        + F V+ +       
Sbjct: 121 TS--VTKVTAEDADDPTVAGHATVTYQI-----IKGN--------EYFTVDDSGVIFTAR 165

Query: 365 KSLDREKQAEYLLTLQAMD 383
             LDRE Q+ Y + ++A D
Sbjct: 166 ADLDRESQSAYEIIVKAKD 184

>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus} Length = 203

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 16/86 (18%)

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
           + E         +  + +        N    Y +                  +F+V    
Sbjct: 9   IREEIDSPLPHHVGKLTSSVG-----NKNAMYII-----------EGESANTIFKVQGYD 52

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
           GDIY  + LDREK+AEY LT   +D 
Sbjct: 53  GDIYAFERLDREKKAEYELTAHIIDR 78

>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246

 Score =  172 bits (437), Expect = 7e-52
 Identities = 32/242 (13%), Positives = 65/242 (26%), Gaps = 36/242 (14%)

Query: 83  ETTIPENSPLNTVVAALKAI--DRDEGQNSYVEYSIINSEATP------FSLGPVDGLLR 134
              +  +    T +  + A+    +E  +  +   +  +  T         +    GLL 
Sbjct: 9   WEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLY 68

Query: 135 VAQKLDREIKSNYTLE--------------IKAKDRGEPSKSSRTKFFIRLLDENDNNPI 180
           + + LD       ++               +      E          +     N + P 
Sbjct: 69  LQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPA 128

Query: 181 ----------FDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLT 230
                     F     S  + EN   G                  V Y ++ G+      
Sbjct: 129 CSSLKPRELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGEGLP-FR 187

Query: 231 ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
            + D+  +     L+ E++ +Y L        G  E           + V D +D+ P F
Sbjct: 188 SAPDSLEVSTRWALDREQREKYELVAVCTVHAGARE---EVVMVPFPVTVYDEDDSAPEF 244

Query: 291 LH 292
            +
Sbjct: 245 EN 246

>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246

 Score =  160 bits (407), Expect = 2e-47
 Identities = 37/210 (17%), Positives = 57/210 (27%), Gaps = 28/210 (13%)

Query: 1   DNGRLEYSI-----VSGDDEEIFTINPSNGTLSNLKHLDRETKSSYN--------LVVMA 47
            + RL   +         +     I    G L   + LD  +    +        L V  
Sbjct: 36  PSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQRSLDHSSWEKLSVRNRGFPLLTVYL 95

Query: 48  TDMAKPPQKR---LSSTTQVSIVIRDVNDNAPEFITAN-----------ETTIPENSPLN 93
                P   R           +     N + P   +                I EN P  
Sbjct: 96  KVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPG 155

Query: 94  TVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKA 153
           T         +       V Y ++  E  PF   P    +     LDRE +  Y L    
Sbjct: 156 TFHQFRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQREKYELVAVC 215

Query: 154 KDR-GEPSKSSRTKFFIRLLDENDNNPIFD 182
               G   +     F + + DE+D+ P F+
Sbjct: 216 TVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245

>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens} Length = 246

 Score =  139 bits (351), Expect = 4e-39
 Identities = 39/230 (16%), Positives = 72/230 (31%), Gaps = 42/230 (18%)

Query: 181 FDSKSYSASVPENISVGATVLQVSAT--DLDDGINGRVRYTI-----ISGDDNHDLTISE 233
           F   +Y   +  + + G  +L V A     ++  + R+   +         +N+ + I E
Sbjct: 3   FSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQE 62

Query: 234 DNGLLRIAKNLNYERKAQYSLTIQAEDC----------GGDTEERIRFDTATVSILVSDI 283
           D GLL + ++L++    + S+  +                   E          +  S  
Sbjct: 63  DTGLLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFF 122

Query: 284 NDNYPV----------FLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLK 333
           N ++P           F  +     + EN  PG                P    V Y L 
Sbjct: 123 NTSFPACSSLKPRELCFPETRPSFRIRENRPPGTF--HQFRLLPVQFLCP-QISVAYRL- 178

Query: 334 DSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMD 383
                        G G  FR    + ++    +LDRE++ +Y L      
Sbjct: 179 -----------LEGEGLPFRSAPDSLEVSTRWALDREQREKYELVAVCTV 217

>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119

 Score =  120 bits (303), Expect = 1e-33
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 6/122 (4%)

Query: 169 IRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDN-- 226
                 NDN+P F+   Y A + EN + G  +LQ+ A DLD G+NG++ Y   +  ++  
Sbjct: 2   SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR 61

Query: 227 HDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDN 286
             L + E +G L +   ++ E   Q   T+ A D G       + D ATV + + D NDN
Sbjct: 62  RLLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPP----KTDKATVVLNIKDENDN 117

Query: 287 YP 288
            P
Sbjct: 118 VP 119

>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119

 Score =  117 bits (296), Expect = 2e-32
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 4/116 (3%)

Query: 68  IRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE---ATP 123
               NDN+P F  +  E  + ENS   T +  L+A D D G N  +EY    +       
Sbjct: 4   GSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRL 63

Query: 124 FSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNP 179
             L    G L V  ++DRE  +     + A+DRG+P K+ +    + + DENDN P
Sbjct: 64  LRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119

>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119

 Score = 88.3 bits (220), Expect = 1e-21
 Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 12/104 (11%)

Query: 280 VSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASS 339
            S  NDN P F  S Y A + EN+ PG    I+ ++A D D    NG + Y         
Sbjct: 4   GSSGNDNSPRFEKSVYEADLAENSAPG--TPILQLRAADLDVGV-NGQIEYVF------- 53

Query: 340 GNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMD 383
                      L R++ T+G + +L  +DRE+  +   T+ A D
Sbjct: 54  --GAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFTVMARD 95

>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 119

 Score = 75.2 bits (186), Expect = 5e-17
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)

Query: 2   NGRLEYSIVSGDDE--EIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLS 59
           NG++EY   +  +    +  ++ ++G LS L  +DRE  +     VMA D  +PP    +
Sbjct: 46  NGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPP---KT 102

Query: 60  STTQVSIVIRDVNDNAP 76
               V + I+D NDN P
Sbjct: 103 DKATVVLNIKDENDNVP 119

>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114

 Score =  110 bits (278), Expect = 4e-30
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 9/119 (7%)

Query: 169 IRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTI---ISGDD 225
                 NDN P+F        +PEN  VG +V+Q+ ATD D G N  +RY     ++   
Sbjct: 2   SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPAT 61

Query: 226 NHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDIN 284
                ++   GL+ + ++L+ E  A + +T+ A D             ATV+I V+D+N
Sbjct: 62  KRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSS------TPARATVTINVTDVN 114

>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114

 Score =  103 bits (259), Expect = 3e-27
 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 66  IVIRDVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIIN----SE 120
                 NDN P F     E  IPEN+P+ T V  L A D D G N+ + Y        + 
Sbjct: 2   SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPAT 61

Query: 121 ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDEN 175
              F+L    GL+ V + LDRE  + + + + A D       +R    I + D N
Sbjct: 62  KRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSST--PARATVTINVTDVN 114

>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114

 Score = 84.4 bits (210), Expect = 2e-20
 Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 11/104 (10%)

Query: 280 VSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASS 339
            S  NDN PVF        + EN   G    ++ + A DAD    N  +RY         
Sbjct: 4   GSSGNDNRPVFKEGQVEVHIPENAPVG--TSVIQLHATDADIGS-NAEIRYIF------- 53

Query: 340 GNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMD 383
             +Q    T  LF +N+TTG I + +SLDRE+ A + +T+ A D
Sbjct: 54  -GAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD 96

>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 114

 Score = 56.3 bits (137), Expect = 3e-10
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 8/74 (10%)

Query: 2   NGRLEYSI---VSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRL 58
           N  + Y     V+   + +F +N + G ++  + LDRE  + + + V+A+D +  P    
Sbjct: 46  NAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---- 101

Query: 59  SSTTQVSIVIRDVN 72
            +   V+I + DVN
Sbjct: 102 -ARATVTINVTDVN 114

>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110

 Score =  101 bits (253), Expect = 2e-26
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 75  APEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-----PFSLGPV 129
             +++      +PENS        L  I     +N  + YS+    A       F + P+
Sbjct: 1   GSDWVI-PPINLPENSR-GPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPI 58

Query: 130 DGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
            G L V + LDRE+ + + L   A D       +     I ++D NDN P F
Sbjct: 59  SGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110

>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110

 Score = 92.7 bits (231), Expect = 2e-23
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 9/106 (8%)

Query: 189 SVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDL----TISEDNGLLRIAKNL 244
           ++PEN S G    ++         N  +RY++     +        I+  +G L + K L
Sbjct: 10  NLPEN-SRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPL 68

Query: 245 NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF 290
           + E  A++ L   A D  G+  E    +   + I V D+NDN P F
Sbjct: 69  DRELIARFHLRAHAVDINGNQVE----NPIDIVINVIDMNDNRPEF 110

>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110

 Score = 88.5 bits (220), Expect = 7e-22
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 2   NGRLEYSI----VSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKR 57
           N  L YS+           IF INP +G LS  K LDRE  + ++L   A D+       
Sbjct: 33  NLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQ--- 89

Query: 58  LSSTTQVSIVIRDVNDNAPEF 78
           + +   + I + D+NDN PEF
Sbjct: 90  VENPIDIVINVIDMNDNRPEF 110

>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A Length = 110

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 11/86 (12%)

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
           + EN+  GP      +    +     N  +RY +   GA    +        +F +N  +
Sbjct: 11  LPENS-RGPF--PQELVRIRSGRDK-NLSLRYSVTGPGADQPPT-------GIFIINPIS 59

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
           G + + K LDRE  A + L   A+D 
Sbjct: 60  GQLSVTKPLDRELIARFHLRAHAVDI 85

>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123

 Score = 89.7 bits (223), Expect = 3e-22
 Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 8/104 (7%)

Query: 85  TIPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-----PFSLGPVDGLLRVAQ 137
            + E         +A + + D  E +   + Y       T      F      G L V  
Sbjct: 18  ALREGEDLSKKNPIAKIHS-DLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTS 76

Query: 138 KLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF 181
            LDRE    + L   A D    +     +  I++LD NDN P+F
Sbjct: 77  ILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVF 120

>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123

 Score = 87.4 bits (217), Expect = 2e-21
 Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 7/82 (8%)

Query: 1   DNGRLEYSI----VSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQK 56
              ++ Y      ++     IF  N   G L+    LDRE    + L   A D       
Sbjct: 42  RGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETPFFLLTGYALDARGNN-- 99

Query: 57  RLSSTTQVSIVIRDVNDNAPEF 78
            +    ++ I + D+NDN P F
Sbjct: 100 -VEKPLELRIKVLDINDNEPVF 120

>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123

 Score = 85.8 bits (213), Expect = 9e-21
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 11/110 (10%)

Query: 189 SVPEN--ISVGATVLQVSATDLDDGINGRVRYTI----ISGDDNHDLTISEDNGLLRIAK 242
           ++ E   +S    + ++  +DL +    ++ Y      I+         ++D G L +  
Sbjct: 18  ALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTS 76

Query: 243 NLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLH 292
            L+ E    + LT  A D  G+  E        + I V DINDN PVF  
Sbjct: 77  ILDREETPFFLLTGYALDARGNNVE----KPLELRIKVLDINDNEPVFTQ 122

>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 123

 Score = 66.6 bits (163), Expect = 9e-14
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 9/86 (10%)

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
           + E         I  + + D         + Y     G +            +F  N  T
Sbjct: 19  LREGEDLSKKNPIAKIHS-DLAEER-GLKITYKYTGKGITEP-------PFGIFVFNKDT 69

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
           G++ +   LDRE+   +LLT  A+D+
Sbjct: 70  GELNVTSILDREETPFFLLTGYALDA 95

>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100

 Score = 84.0 bits (208), Expect = 3e-20
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 6/96 (6%)

Query: 189 SVPEN--ISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNY 246
            +PEN        V +V  +D  +G   R+    +  D      I+E+ G + + + L+ 
Sbjct: 9   LIPENQRQPFPRDVGKVVDSDRPEGSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDR 68

Query: 247 ERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
           E  A Y L ++  D  G T E        + ++V D
Sbjct: 69  ETIATYQLYVETTDASGKTLE----GPVPLEVIVID 100

>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100

 Score = 80.9 bits (200), Expect = 4e-19
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 3/92 (3%)

Query: 85  TIPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-PFSLGPVDGLLRVAQKLDR 141
            IPEN   P    V  +   DR EG    +    ++ +    F +    G + V + LDR
Sbjct: 9   LIPENQRQPFPRDVGKVVDSDRPEGSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDR 68

Query: 142 EIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLD 173
           E  + Y L ++  D    +        + ++D
Sbjct: 69  ETIATYQLYVETTDASGKTLEGPVPLEVIVID 100

>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100

 Score = 73.9 bits (182), Expect = 1e-16
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 2   NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
             RL    V  D +  F IN + G++S  + LDRET ++Y L V  TD +      L   
Sbjct: 35  KFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKT---LEGP 91

Query: 62  TQVSIVIRD 70
             + +++ D
Sbjct: 92  VPLEVIVID 100

>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus} Length = 100

 Score = 61.6 bits (150), Expect = 3e-12
 Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 12/86 (13%)

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
           + EN        +  V   D         +     D                 FR+N  T
Sbjct: 10  IPENQRQPFPRDVGKVVDSDRPE-GSKFRLTGKGVD-----------QDPKGTFRINENT 57

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
           G + + ++LDRE  A Y L ++  D+
Sbjct: 58  GSVSVTRTLDRETIATYQLYVETTDA 83

>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99

 Score = 80.5 bits (199), Expect = 5e-19
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 3/92 (3%)

Query: 85  TIPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-PFSLGPVDGLLRVAQKLDR 141
           +IPEN   P   +V  +   DR  G    +    ++ E    F +    G + V + LDR
Sbjct: 8   SIPENQRIPFPKIVGRVVVSDRIPGSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDR 67

Query: 142 EIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLD 173
           E   +Y L+++  D    +        I ++D
Sbjct: 68  EAIPSYQLQVETTDENGKTIEGPVDLEILVID 99

>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99

 Score = 80.1 bits (198), Expect = 8e-19
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 186 YSASVPEN--ISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKN 243
            S S+PEN  I     V +V  +D   G   ++    +  +      I+E++G + + K 
Sbjct: 5   PSISIPENQRIPFPKIVGRVVVSDRIPGSKIKLYGKGVDQEPKGIFKINENSGEVSVTKA 64

Query: 244 LNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
           L+ E    Y L ++  D  G    +       + ILV D
Sbjct: 65  LDREAIPSYQLQVETTDENG----KTIEGPVDLEILVID 99

>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99

 Score = 71.6 bits (176), Expect = 7e-16
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 2  NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
            +L    V  + + IF IN ++G +S  K LDRE   SY L V  TD        +   
Sbjct: 34 KIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTDENGKT---IEGP 90

Query: 62 TQVSIVIRD 70
            + I++ D
Sbjct: 91 VDLEILVID 99

>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A Length = 99

 Score = 64.7 bits (158), Expect = 2e-13
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 12/86 (13%)

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
           + EN        +  V   D         +     D                +F++N  +
Sbjct: 9   IPENQRIPFPKIVGRVVVSDRIP-GSKIKLYGKGVD-----------QEPKGIFKINENS 56

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
           G++ + K+LDRE    Y L ++  D 
Sbjct: 57  GEVSVTKALDREAIPSYQLQVETTDE 82

>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99

 Score = 79.8 bits (197), Expect = 7e-19
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 6/100 (6%)

Query: 185 SYSASVPEN--ISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAK 242
           +    +PEN       +V +V  ++  +G   R+    +  D      I+E +G + + +
Sbjct: 4   ATPILIPENQRPPFPRSVGKVIRSEGTEGAKFRLSGKGVDQDPKGIFRINEISGDVSVTR 63

Query: 243 NLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
            L+ E  A Y L ++  D  G    +I      + I V D
Sbjct: 64  PLDREAIANYELEVEVTDLSG----KIIDGPVRLDISVID 99

>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99

 Score = 77.1 bits (190), Expect = 8e-18
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 3/92 (3%)

Query: 85  TIPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-PFSLGPVDGLLRVAQKLDR 141
            IPEN   P    V  +   +  EG    +    ++ +    F +  + G + V + LDR
Sbjct: 8   LIPENQRPPFPRSVGKVIRSEGTEGAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDR 67

Query: 142 EIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLD 173
           E  +NY LE++  D          +  I ++D
Sbjct: 68  EAIANYELEVEVTDLSGKIIDGPVRLDISVID 99

>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99

 Score = 70.5 bits (173), Expect = 2e-15
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 2  NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSST 61
            RL    V  D + IF IN  +G +S  + LDRE  ++Y L V  TD++      +   
Sbjct: 34 KFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDLSGKI---IDGP 90

Query: 62 TQVSIVIRD 70
           ++ I + D
Sbjct: 91 VRLDISVID 99

>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus} Length = 99

 Score = 59.7 bits (145), Expect = 1e-11
 Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 12/91 (13%)

Query: 294 PYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFR 353
               L+ EN  P     +  V   +         +     D                +FR
Sbjct: 4   ATPILIPENQRPPFPRSVGKVIRSEGTE-GAKFRLSGKGVD-----------QDPKGIFR 51

Query: 354 VNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
           +N  +GD+ + + LDRE  A Y L ++  D 
Sbjct: 52  INEISGDVSVTRPLDREAIANYELEVEVTDL 82

>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105

 Score = 79.3 bits (196), Expect = 1e-18
 Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 75  APEFI-TANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-----PFSLGP 128
            P         + PEN         L  I  ++ +   V YSI    A       F +  
Sbjct: 1   GPLGSWVIPPISCPENEK-GPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIER 59

Query: 129 VDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDE 174
             G L+V + LDRE  + YTL   A      +     +  I + D+
Sbjct: 60  ETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ 105

>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105

 Score = 77.8 bits (192), Expect = 5e-18
 Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 9/108 (8%)

Query: 179 PIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDL----TISED 234
           P+        S PEN   G     +     +    G+V Y+I     +        I  +
Sbjct: 2   PLGSWVIPPISCPEN-EKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERE 60

Query: 235 NGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
            G L++ + L+ ER A Y+L   A    G+  E    D   + I V+D
Sbjct: 61  TGWLKVTEPLDRERIATYTLFSHAVSSNGNAVE----DPMEILITVTD 104

>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105

 Score = 68.2 bits (167), Expect = 2e-14
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 7/74 (9%)

Query: 1   DNGRLEYSIVSGDDEE----IFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQK 56
             G++ YSI     +     +F I    G L   + LDRE  ++Y L   A         
Sbjct: 34  KEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNA-- 91

Query: 57  RLSSTTQVSIVIRD 70
            +    ++ I + D
Sbjct: 92  -VEDPMEILITVTD 104

>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B Length = 105

 Score = 67.0 bits (164), Expect = 3e-14
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 11/97 (11%)

Query: 288 PVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGG 347
           P+           EN        ++ ++++        G V Y +   GA +        
Sbjct: 2   PLGSWVIPPISCPENEKGPFPKNLVQIKSNKDK----EGKVFYSITGQGADTPPV----- 52

Query: 348 TGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
              +F +   TG + + + LDRE+ A Y L   A+ S
Sbjct: 53  --GVFIIERETGWLKVTEPLDRERIATYTLFSHAVSS 87

>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99

 Score = 73.6 bits (181), Expect = 1e-16
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 1  DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
           +G ++Y +       +FTI+ + G +  ++ LDRE +S Y L   A D        +  
Sbjct: 32 GDGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRTGRP--MEP 89

Query: 61 TTQVSIVIRD 70
           ++  I I+D
Sbjct: 90 ESEFIIKIQD 99

>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99

 Score = 73.6 bits (181), Expect = 1e-16
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 189 SVPENIS-VGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYE 247
            V E  +      +    +D+D G +G ++Y +         TI +  G +   + L+ E
Sbjct: 9   FVLEEYTGTDPLYVGKLHSDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDRE 67

Query: 248 RKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
            ++QY+L  QA D       R     +   I + D
Sbjct: 68  ERSQYTLRAQALDRRTG---RPMEPESEFIIKIQD 99

>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99

 Score = 69.3 bits (170), Expect = 5e-15
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 15/91 (16%)

Query: 294 PYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFR 353
               ++ E T   P    +     D D    +G ++Y L           +  G G +F 
Sbjct: 6   NQFFVLEEYTGTDPL--YVGKLHSDMDR--GDGSIKYIL-----------SGEGAGIVFT 50

Query: 354 VNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
           ++ TTGDI+ ++ LDRE++++Y L  QA+D 
Sbjct: 51  IDDTTGDIHAIQRLDREERSQYTLRAQALDR 81

>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus} Length = 99

 Score = 68.2 bits (167), Expect = 1e-14
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 4/95 (4%)

Query: 82  NETTIPENS-PLNTVVAALKAIDRDEGQNSYVEYSIINSEA-TPFSLGPVDGLLRVAQKL 139
           N+  + E     + +       D D G +  ++Y +    A   F++    G +   Q+L
Sbjct: 6   NQFFVLEEYTGTDPLYVGKLHSDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRL 64

Query: 140 DREIKSNYTLEIKAKDRG-EPSKSSRTKFFIRLLD 173
           DRE +S YTL  +A DR         ++F I++ D
Sbjct: 65  DREERSQYTLRAQALDRRTGRPMEPESEFIIKIQD 99

>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98

 Score = 72.5 bits (178), Expect = 3e-16
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 1  DNGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
           + +++Y +       IF IN   G +  +K LDRE K+ Y L   A D        L  
Sbjct: 31 GSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNK--PLEP 88

Query: 61 TTQVSIVIRD 70
           ++  I ++D
Sbjct: 89 PSEFIIKVQD 98

>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98

 Score = 70.9 bits (174), Expect = 1e-15
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 5/97 (5%)

Query: 187 SASVPENISV-GATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLN 245
              V E  S     ++    TDLD G + +++Y +          I++  G +   K L+
Sbjct: 6   QMFVLEEFSGPEPILVGRLHTDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLD 64

Query: 246 YERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
            E KA+Y+LT QA D   +   +     +   I V D
Sbjct: 65  REEKAEYTLTAQAVDFETN---KPLEPPSEFIIKVQD 98

>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98

 Score = 67.1 bits (164), Expect = 3e-14
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 15/84 (17%)

Query: 301 ENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGD 360
           E + P P    + V     D  P +  ++Y L   GA           G +F++N  TGD
Sbjct: 12  EFSGPEP----ILVGRLHTDLDPGSKKIKYILSGDGA-----------GTIFQINDITGD 56

Query: 361 IYLLKSLDREKQAEYLLTLQAMDS 384
           I+ +K LDRE++AEY LT QA+D 
Sbjct: 57  IHAIKRLDREEKAEYTLTAQAVDF 80

>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A Length = 98

 Score = 60.9 bits (148), Expect = 5e-12
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 82  NETTIPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSEA-TPFSLGPVDGLLRVAQK 138
           N+  + E    P   +V  L   D D G    ++Y +    A T F +  + G +   ++
Sbjct: 5   NQMFVLEEFSGPEPILVGRLHT-DLDPGSKK-IKYILSGDGAGTIFQINDITGDIHAIKR 62

Query: 139 LDREIKSNYTLEIKAKDR-GEPSKSSRTKFFIRLLD 173
           LDRE K+ YTL  +A D          ++F I++ D
Sbjct: 63  LDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQD 98

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 1e-06
 Identities = 52/349 (14%), Positives = 115/349 (32%), Gaps = 107/349 (30%)

Query: 9   IVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAK---PPQKRLSSTTQVS 65
            +S       +++  + TL+       E KS   L++   D      P +   ++  ++S
Sbjct: 280 FLSAATTTHISLDHHSMTLT-----PDEVKS---LLLKYLDCRPQDLPREVLTTNPRRLS 331

Query: 66  IV---IRDVNDNAPEFITANETTIPENSPLNTVV-AALKAIDRDEGQNSYVEYSIINSEA 121
           I+   IRD         T +         L T++ ++L  ++  E +  +   S+     
Sbjct: 332 IIAESIRD------GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV----- 380

Query: 122 TPFSLGPVDGLL--RVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNP 179
             F   P    +   +   +  ++  +  + +  K       S        L+++     
Sbjct: 381 --F---PPSAHIPTILLSLIWFDVIKSDVMVVVNKLH---KYS--------LVEK----- 419

Query: 180 IFDSKSYSASVPENISVGATVLQVSAT---DLDDGINGRV--RYTIISGDDNHDLTISED 234
               K  + S+P         + +      + +  ++  +   Y I    D+ DL     
Sbjct: 420 --QPKESTISIPS--------IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL 469

Query: 235 NGL--------LRIAKN-----------LNY---ERKAQYSLTIQAEDCGG---DT---- 265
           +          L+  ++           L++   E+K ++  T  A +  G   +T    
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDST--AWNASGSILNTLQQL 527

Query: 266 ---EERIRFDTATVSILVSDINDNYP----VFLHSPY-----LALVNEN 302
              +  I  +      LV+ I D  P      + S Y     +AL+ E+
Sbjct: 528 KFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAED 576

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 1e-06
 Identities = 64/436 (14%), Positives = 127/436 (29%), Gaps = 108/436 (24%)

Query: 5   LEYSIVSGDDEE----IFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSS 60
           +++ I+S D       +F    S       K ++   + +Y  + M+    +  Q  + +
Sbjct: 51  IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL-MSPIKTEQRQPSMMT 109

Query: 61  TTQVSIVIRDVNDNAPEFITANETTIPENSPLNTVVAALK-------------------- 100
              +    R  NDN   F   N   +    P   +  AL                     
Sbjct: 110 RMYIEQRDRLYNDN-QVFAKYN---VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW 165

Query: 101 -AID--RDEGQNSYVEYSI----INSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKA 153
            A+D          +++ I    + +  +P      + +L + QKL  +I  N+T     
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSP------ETVLEMLQKLLYQIDPNWT----- 214

Query: 154 KDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSY-----------SASVPENISVGATVLQ 202
                   SS  K  I  +       +  SK Y           +A      ++   +L 
Sbjct: 215 ---SRSDHSSNIKLRIHSIQAELRR-LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL- 269

Query: 203 VSATDLD--DGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAED 260
           ++       D ++      I     +  LT  E   LL   K L+   +    L  +   
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL--LKYLDCRPQ---DLPREV-- 322

Query: 261 CGGD-----------TEERIRFDT-------ATVSILVSDINDNYPVFLHSPY--LALVN 300
              +            +    +D           +I+ S +N   P      +  L++  
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382

Query: 301 ENT-LPGPSFRIMTVQAHDADSLPF-NGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
            +  +P     ++      +D +   N L +Y L +                   +    
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES----------TISIP--- 429

Query: 359 GDIYLLKSLDREKQAE 374
             IYL   +  E +  
Sbjct: 430 -SIYLELKVKLENEYA 444

>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus} Length = 125

 Score = 44.6 bits (106), Expect = 5e-06
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 15/84 (17%)

Query: 9   IVSGDDEEIFTINPSNGTLSNLKHLDRE------TKSSYNLVVMATDMAKPPQKRLSSTT 62
           I+S  ++++  +   +G L   + LDRE           +  V+      P Q       
Sbjct: 48  ILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQVLLKS---PVQ-----FI 99

Query: 63  QVSIVIRDVNDNAPEFITANETTI 86
           Q  I ++DVND+APEF+  +E+  
Sbjct: 100 QGEIQLQDVNDHAPEFME-DESGP 122

>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1 Length = 159

 Score = 39.8 bits (92), Expect = 4e-04
 Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 173 DENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTIS 232
           +       F    YSA +P+++  G  +L V  ++ +     +V+Y      +  D  + 
Sbjct: 28  EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYES---SEPADFKVD 82

Query: 233 EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIR 270
           ED G +   ++     + Q    I A+D     + ++ 
Sbjct: 83  ED-GTVYAVRSFPLTAE-QAKFLIYAQDKETQEKWQVA 118

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	384
3q2w_A	559	Cadherin-2; cell adhesion, calcium binding; HET: M	100.0
1l3w_A	546	EP-cadherin, C-cadherin; cell adhesion, calcium bi	100.0
3q2v_A	550	Cadherin-1; cell adhesion, calcium binding; HET: M	100.0
3ubh_A	419	Neural-cadherin; cell adhesion; 2.70A {Drosophila	100.0
1q55_A	880	EP-cadherin, C-cadherin; trans interaction, desmos	100.0
3q2w_A	559	Cadherin-2; cell adhesion, calcium binding; HET: M	100.0
3q2v_A	550	Cadherin-1; cell adhesion, calcium binding; HET: M	100.0
1l3w_A	546	EP-cadherin, C-cadherin; cell adhesion, calcium bi	100.0
1q55_A	880	EP-cadherin, C-cadherin; trans interaction, desmos	100.0
2a62_A	322	Cadherin-8; extracellular domain, homodimer, calci	100.0
2a62_A	322	Cadherin-8; extracellular domain, homodimer, calci	100.0
3ubf_A	316	Neural-cadherin; cell adhesion; 2.50A {Drosophila	100.0
3ubf_A	316	Neural-cadherin; cell adhesion; 2.50A {Drosophila	100.0
3ubh_A	419	Neural-cadherin; cell adhesion; 2.70A {Drosophila	100.0
2a4e_A	215	Cadherin-11; dimer, calcium binding, cell adhesion	100.0
3mvs_A	210	Cadherin-23, otocadherin; adhesion, extracellular	100.0
2x2u_A	246	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2qvi_A	215	Cadherin-2; beta barrel, strand SWAP, domain SWAP,	100.0
2a4e_A	215	Cadherin-11; dimer, calcium binding, cell adhesion	100.0
3qrb_A	213	Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu	100.0
3ppe_A	203	Vascular endothelial cadherin; extracellular cadhe	100.0
3k5r_A	218	Cadherin 13; mouse, structural protein; 2.00A {Mus	100.0
3mvs_A	210	Cadherin-23, otocadherin; adhesion, extracellular	100.0
3lnd_A	207	CDH6 protein, cadherin 6; cell adhesion, cell memb	100.0
3qrb_A	213	Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus mu	100.0
2x2u_A	246	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2qvi_A	215	Cadherin-2; beta barrel, strand SWAP, domain SWAP,	100.0
3ppe_A	203	Vascular endothelial cadherin; extracellular cadhe	100.0
3k5r_A	218	Cadherin 13; mouse, structural protein; 2.00A {Mus	100.0
3lnd_A	207	CDH6 protein, cadherin 6; cell adhesion, cell memb	100.0
4apx_B	242	Protocadherin-15, otocadherin; cell adhesion, hear	99.98
4apx_B	242	Protocadherin-15, otocadherin; cell adhesion, hear	99.95
2yst_A	119	Protocadherin-7; BH-PCDH, beta-sandwich, structura	99.94
2yst_A	119	Protocadherin-7; BH-PCDH, beta-sandwich, structura	99.94
2ee0_A	114	Protocadherin-9; Ca domain, structural genomics, N	99.91
2ee0_A	114	Protocadherin-9; Ca domain, structural genomics, N	99.91
2yqg_A	123	Desmoglein-2, HDGC; cadherin, structural genomics,	99.86
2yqg_A	123	Desmoglein-2, HDGC; cadherin, structural genomics,	99.85
1ncg_A	110	N-cadherin; cell adhesion protein; 2.10A {Mus musc	99.83
1ncg_A	110	N-cadherin; cell adhesion protein; 2.10A {Mus musc	99.81
1wyj_A	125	Protocadherin beta 14; SS bond, structural genomic	99.77
1zvn_A	99	Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal	99.75
1zxk_A	98	Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu	99.74
1zvn_A	99	Mn-cadherin; strand dimer, ----; 2.16A {Gallus gal	99.73
1wyj_A	125	Protocadherin beta 14; SS bond, structural genomic	99.72
1zxk_A	98	Cadherin-8; strand dimer, cell adhesion; 2.00A {Mu	99.72
3k6d_A	99	T-cadherin; cell adhesion; 1.80A {Xenopus laevis}	99.7
2omz_B	105	Epithelial-cadherin; leucine-rich-repeat, nvasion	99.69
3k6f_A	100	T-cadherin; cell adhesion, calcium, cell membrane,	99.69
3k6i_A	99	T-cadherin; cell adhesion, alternative splicing, c	99.69
3k6d_A	99	T-cadherin; cell adhesion; 1.80A {Xenopus laevis}	99.68
3k6f_A	100	T-cadherin; cell adhesion, calcium, cell membrane,	99.66
3k6i_A	99	T-cadherin; cell adhesion, alternative splicing, c	99.66
2omz_B	105	Epithelial-cadherin; leucine-rich-repeat, nvasion	99.64
1wuz_A	103	Pcdha4 protein, CNR-EC1; cadherin, heteronuclear p	99.42
1wuz_A	103	Pcdha4 protein, CNR-EC1; cadherin, heteronuclear p	99.34
3pdd_A	190	Glycoside hydrolase, family 9; CBHA, beta-sandwich	96.32
3pdd_A	190	Glycoside hydrolase, family 9; CBHA, beta-sandwich	96.04
3rb5_A	298	Na/Ca exchange protein; CBD12, calcium binding and	94.89
3rb5_A	298	Na/Ca exchange protein; CBD12, calcium binding and	94.36
2kpn_A	103	Bacillolysin; solution structure, BIG_3 domain, PF	92.67
2yhg_A	437	SDE_182CT, cellulose-binding protein; hydrolase, g	92.16
2yhg_A	437	SDE_182CT, cellulose-binding protein; hydrolase, g	91.85
2yrl_A	102	KIAA1837 protein; PKD domain, NPPSFA, national pro	91.54
1op4_A	159	Neural-cadherin; beta sandwich, cadherin-like doma	90.56
1op4_A	159	Neural-cadherin; beta sandwich, cadherin-like doma	89.29
2yrl_A	102	KIAA1837 protein; PKD domain, NPPSFA, national pro	87.88
3ead_A	137	Na/Ca exchange protein; CBD1, calcium regulation,	84.02

>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}

Probab=100.00  E-value=2e-66  Score=512.17  Aligned_cols=363  Identities=30%  Similarity=0.435  Sum_probs=329.4

Q ss_pred             CccEEEEEEeCCC----CCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120          2 NGRLEYSIVSGDD----EEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE   77 (384)
Q Consensus         2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~   77 (384)
                      |+.|+|+|.+++.    .++|.||+.+|.|++.+.||||....|.|+|+|+|+++++   +++++.|.|.|.|+|||+|.
T Consensus        31 n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g~~~---~~~~~~v~I~V~DvNDn~P~  107 (559)
T 3q2w_A           31 NLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQ---VENPIDIVINVIDMNDNRPE  107 (559)
T ss_dssp             TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCE---EEEEEEEEEEEECCCCCCCE
T ss_pred             CcEEEEEEECCCCCCCCCceEEEeCCceEEEECCccCCCCCceEEEEEEEEECCCCc---cceeEEEEEEEEeCCCCCCc
Confidence            6789999987544    3689999999999999999999999999999999998764   68889999999999999999


Q ss_pred             EccC-ceeEeeCCCCCCcEEEEEEEEeCCCC--CCceEEEEEEcCCC-----CCeeeeCcceEEEEce-eCCccCCCeEE
Q psy13120         78 FITA-NETTIPENSPLNTVVAALKAIDRDEG--QNSYVEYSIINSEA-----TPFSLGPVDGLLRVAQ-KLDREIKSNYT  148 (384)
Q Consensus        78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~--~~~~~~y~l~~~~~-----~~F~i~~~~G~i~~~~-~ld~e~~~~~~  148 (384)
                      |... |.++|+|++++|+.++++.|+|+|.+  .|+.++|+|.++..     +.|.|++.+|.|++.+ .||||....|.
T Consensus       108 F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~  187 (559)
T 3q2w_A          108 FLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYT  187 (559)
T ss_dssp             ESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEE
T ss_pred             cCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEEE
Confidence            9988 99999999999999999999999987  58899999987632     6899999999999987 99999999999


Q ss_pred             EEEEEEeCCC---CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCC--CceEEEEEEeC
Q psy13120        149 LEIKAKDRGE---PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGI--NGRVRYTIISG  223 (384)
Q Consensus       149 l~V~a~d~~~---~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~--~~~i~y~i~~~  223 (384)
                      |+|+|+|+++   ++++++++|+|+|.|+|||+|.|....|.+.|+|+. +|+.++++.|+|+|.+.  ++.+.|+|.++
T Consensus       188 l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g  266 (559)
T 3q2w_A          188 LIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGG  266 (559)
T ss_dssp             EEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEES
T ss_pred             EEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecC
Confidence            9999999854   358999999999999999999999999999999997 89999999999999865  56799999999


Q ss_pred             CCCCCeEE----ECCCcEEEEcccCCccccCeEEEEEEEEECCCCCc--ceeeeeEEEEEEEEeecCCCCCcccCCCeeE
Q psy13120        224 DDNHDLTI----SEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTE--ERIRFDTATVSILVSDINDNYPVFLHSPYLA  297 (384)
Q Consensus       224 ~~~~~f~i----~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~--~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~  297 (384)
                      +..+.|.|    ++.+|.|++.++||||....|.|+|+|+|++....  .+.++++++|+|.|.|+|| +|.|.+..|.+
T Consensus       267 ~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~  345 (559)
T 3q2w_A          267 DPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKII  345 (559)
T ss_dssp             CTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEE
T ss_pred             CCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEE
Confidence            98999999    46799999999999999999999999999753110  0113789999999999999 79999999999


Q ss_pred             EEcCCCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccc----c
Q psy13120        298 LVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQ----A  373 (384)
Q Consensus       298 ~v~e~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~----~  373 (384)
                      .|.|+..+  |..++++.|+|+|.+. ++.++|+|..            +..++|.|++.+|.|++.+.||||..    .
T Consensus       346 ~v~En~~~--g~~v~~v~A~D~D~g~-n~~i~Ysi~~------------~~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~  410 (559)
T 3q2w_A          346 RQEEGLHA--GTMLTTLTAQDPDRYM-QQNIRYTKLS------------DPANWLKIDPVNGQITTIAVLDRESPNVKNN  410 (559)
T ss_dssp             EEESCCCT--TCEEEECCEECSCSSS-CCCEEEEEEE------------CTTCCEEECTTTCEEEESSCCCSSSTTSCSS
T ss_pred             EEeCCCCC--CCEEEEEEEECCCCCC-CCceEEEEcc------------CCccceEecCCceEEEEccccCcccccccCC
Confidence            99999944  8899999999999987 8999999987            56789999999999999999999986    9


Q ss_pred             EEEEEEEEEcC
Q psy13120        374 EYLLTLQAMDS  384 (384)
Q Consensus       374 ~~~l~V~a~D~  384 (384)
                      .|+|+|+|+|+
T Consensus       411 ~y~l~V~A~D~  421 (559)
T 3q2w_A          411 IYNATFLASDN  421 (559)
T ss_dssp             EEEEEEEEEEC
T ss_pred             EEEEEEEEEcC
Confidence            99999999995

>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1

Probab=100.00  E-value=6.4e-67  Score=513.98  Aligned_cols=361  Identities=30%  Similarity=0.446  Sum_probs=330.2

Q ss_pred             CccEEEEEEeCCC----CCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120          2 NGRLEYSIVSGDD----EEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE   77 (384)
Q Consensus         2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~   77 (384)
                      |+.|+|+|.+++.    .++|+|++.+|.|++++.||||....|.|+|+|+|.++++   +++++.|+|.|.|+|||+|.
T Consensus        37 n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~~~~~---~~~~~~v~I~V~DvNDn~P~  113 (546)
T 1l3w_A           37 FNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSP---VEEPMEITINVIDQNDNRPK  113 (546)
T ss_dssp             SSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCB---CSCCEEEEEEEECCSCCCCE
T ss_pred             CceEEEEEECCCCCCCCCceEEEeCCccEEEECCcCCcccCceEEEEEEEEeCCCCc---ccceEEEEEEEEecccCcCE
Confidence            6889999987653    4689999999999999999999999999999999998764   57789999999999999999


Q ss_pred             EccC-ceeEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcCC-----CCCeeeeCcceEEEEc-eeCCccCCCeE
Q psy13120         78 FITA-NETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINSE-----ATPFSLGPVDGLLRVA-QKLDREIKSNY  147 (384)
Q Consensus        78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~---~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~-~~ld~e~~~~~  147 (384)
                      |... |.+.|+|++++|+.++++.|+|+|.+   .|+.++|+|.++.     .+.|.|++.+|.|++. +.||||....|
T Consensus       114 F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y  193 (546)
T 1l3w_A          114 FTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEY  193 (546)
T ss_dssp             ESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEE
T ss_pred             ecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceE
Confidence            9988 89999999999999999999999998   6889999998764     3689999999999985 79999999999


Q ss_pred             EEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCC--CCCCceEEEEEEeCCC
Q psy13120        148 TLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLD--DGINGRVRYTIISGDD  225 (384)
Q Consensus       148 ~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D--~~~~~~i~y~i~~~~~  225 (384)
                      .|+|+|+|+++|++++.++|+|.|.|+|||+|.|....|.+.|+|+ ++|+.|+++.|+|+|  .+.++.++|+|.+ +.
T Consensus       194 ~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~~  271 (546)
T 1l3w_A          194 TLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NE  271 (546)
T ss_dssp             EEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CT
T ss_pred             EEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-CC
Confidence            9999999999888999999999999999999999999999999999 999999999999999  6778899999986 67


Q ss_pred             CCCeEEE----CCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcC
Q psy13120        226 NHDLTIS----EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE  301 (384)
Q Consensus       226 ~~~f~i~----~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e  301 (384)
                      .+.|.|+    ..+|.|++.++||||....|.|+|+|+|+++... +.++++++|+|+|.|+|| +|+|.+..|.+.|.|
T Consensus       272 ~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~-~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~E  349 (546)
T 1l3w_A          272 GGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSV-PLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSE  349 (546)
T ss_dssp             TSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSS-CCCCCCEEEEEEEECCCC-CCEESSCEECCCBCT
T ss_pred             CceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCC-CCcceeEEEEEEEEcCCC-CCcEecceEEEEEeC
Confidence            7899996    2589999999999999999999999999874211 013678999999999999 999999999999999


Q ss_pred             CCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccc----cEEEE
Q psy13120        302 NTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQ----AEYLL  377 (384)
Q Consensus       302 ~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~----~~~~l  377 (384)
                      +..+  |..++++.|+|+|.+. ++.++|+|..            +..++|.|++.+|.|++.+.||||..    ..|+|
T Consensus       350 n~~~--g~~v~~v~A~D~D~g~-n~~i~ysi~~------------~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l  414 (546)
T 1l3w_A          350 DLSR--GEKIISLVAQDPDKQQ-IQKLSYFIGN------------DPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTV  414 (546)
T ss_dssp             TCCS--SEEEEECCEECCCTTC-CCCEEEEECC------------CSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEE
T ss_pred             CCCC--CCEEEEEEEECCCCCC-CceEEEEECC------------CCCCcEEEeCCcEEEEECCccCCccccCCCCEEEE
Confidence            9944  8999999999999987 8999999986            45689999999999999999999997    89999


Q ss_pred             EEEEEcC
Q psy13120        378 TLQAMDS  384 (384)
Q Consensus       378 ~V~a~D~  384 (384)
                      +|+|+|+
T Consensus       415 ~V~a~D~  421 (546)
T 1l3w_A          415 IMLVTDD  421 (546)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEEC
Confidence            9999994

>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}

Probab=100.00  E-value=2.7e-66  Score=510.36  Aligned_cols=361  Identities=29%  Similarity=0.443  Sum_probs=329.7

Q ss_pred             CccEEEEEEeCC----CCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120          2 NGRLEYSIVSGD----DEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE   77 (384)
Q Consensus         2 ~~~i~Y~i~~~~----~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~   77 (384)
                      |++|+|+|.+++    +.++|.|++.+|.|++++.||||....|.|+++|+|.++++   ++.++.|+|.|.|+|||+|.
T Consensus        31 ~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~~~~~---~~~~~~v~I~V~DvNDn~P~  107 (550)
T 3q2v_A           31 ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEA---VEDPMEIVITVTDQNDNRPE  107 (550)
T ss_dssp             TSCEEEEEESBTTTBSSCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCB---CSCCEEEEEEEECCSCCCCC
T ss_pred             CceEEEEEECCCCCCCCCceEEEeCCceEEEECCccCcccCCeeEEEEEEEeCCCCc---ccceEEEEEEEEecCCCCCc
Confidence            678999998743    34699999999999999999999999999999999998754   47788999999999999999


Q ss_pred             EccC-ceeEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcC-----CCCCeeeeCcceEEEE-ceeCCccCCCeE
Q psy13120         78 FITA-NETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINS-----EATPFSLGPVDGLLRV-AQKLDREIKSNY  147 (384)
Q Consensus        78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~---~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~-~~~ld~e~~~~~  147 (384)
                      |... |.+.|+|++++|+.++++.|+|+|.+   .|+.++|+|.++     ..+.|.|++.+|.|++ .+.||||....|
T Consensus       108 F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y  187 (550)
T 3q2v_A          108 FTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTY  187 (550)
T ss_dssp             BSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEE
T ss_pred             cCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEE
Confidence            9988 99999999999999999999999998   788999999875     2468999999999998 579999999999


Q ss_pred             EEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCc--eEEEEEEeCCC
Q psy13120        148 TLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGING--RVRYTIISGDD  225 (384)
Q Consensus       148 ~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~--~i~y~i~~~~~  225 (384)
                      .|+|+|+|+|+++++++++|+|+|.|+|||+|.|....|.+.|.|+ +.|+.|+++.|+|+|.+.++  .+.|+|.+ +.
T Consensus       188 ~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~-~~  265 (550)
T 3q2v_A          188 TLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVN-DP  265 (550)
T ss_dssp             EEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESS-CS
T ss_pred             EEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEe-CC
Confidence            9999999998889999999999999999999999999999999999 99999999999999988665  46799985 77


Q ss_pred             CCCeEEE----CCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcC
Q psy13120        226 NHDLTIS----EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE  301 (384)
Q Consensus       226 ~~~f~i~----~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e  301 (384)
                      .+.|.|+    +.+|.|++.++||||....|.|+|+|+|++.... +..+++++|+|+|.|+|| +|.|.+..|...|+|
T Consensus       266 ~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~-~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E  343 (550)
T 3q2v_A          266 DQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEG-SLVPSTATVTVDVVDVNE-APIFMPAERRVEVPE  343 (550)
T ss_dssp             SCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCS-SCCCEEEEEEEEEECCCC-CCEESSSSCEEEEET
T ss_pred             CCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCC-CccceEEEEEEEEEecCC-CCeEcCcceEEEEec
Confidence            8899998    6899999999999999999999999999874211 013688999999999999 999999999999999


Q ss_pred             CCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccc-----cEEE
Q psy13120        302 NTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQ-----AEYL  376 (384)
Q Consensus       302 ~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~-----~~~~  376 (384)
                      +..+  |+.++++.|+|+|.+. ++.++|+|.+            +..++|.|++.+|.|++.+.||||..     ..|.
T Consensus       344 ~~~~--gt~v~~v~A~D~D~g~-n~~i~y~i~~------------~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~  408 (550)
T 3q2v_A          344 DFGV--GQEITSYTAREPDTFM-DQKITYRIWR------------DTANWLEINPETGAIFTRAEMDREDAEHVKNSTYV  408 (550)
T ss_dssp             TCCS--SCEEEECCEECCCCST-TCCCEEEEEE------------CTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEE
T ss_pred             CCCC--CCEEEEEeCCCCCCCC-CCCEEEEEec------------CCCCcEEEeCCCcEEEECCccCcccccccCCCEEE
Confidence            9944  8899999999999987 8999999986            56789999999999999999999998     9999


Q ss_pred             EEEEEEcC
Q psy13120        377 LTLQAMDS  384 (384)
Q Consensus       377 l~V~a~D~  384 (384)
                      |+|+|+|+
T Consensus       409 l~V~A~D~  416 (550)
T 3q2v_A          409 ALIIATDD  416 (550)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEEeC
Confidence            99999995

>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}

Probab=100.00  E-value=2.3e-64  Score=481.05  Aligned_cols=353  Identities=29%  Similarity=0.454  Sum_probs=317.4

Q ss_pred             CccEEEEEEeCCCCCcEEEeC--------CCcEEEECccCCcCCC---cEEEEEEEEEeCCCCCCCCceeEEEEEEEEEe
Q psy13120          2 NGRLEYSIVSGDDEEIFTINP--------SNGTLSNLKHLDRETK---SSYNLVVMATDMAKPPQKRLSSTTQVSIVIRD   70 (384)
Q Consensus         2 ~~~i~Y~i~~~~~~~~F~id~--------~tG~i~~~~~lD~E~~---~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~d   70 (384)
                      |+.|+|+|.++++...|+|++        .+|.|++++.||||..   ..|.|.|.|+|.+.++...+++.+.|+|.|.|
T Consensus        24 n~~v~Ysi~~~~~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~D  103 (419)
T 3ubh_A           24 EGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKD  103 (419)
T ss_dssp             TTCEEEECCCSSTTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEEC
T ss_pred             CceEEEEEecCCCCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEE
Confidence            789999998877778899997        8999999999999997   79999999999875433346888999999999


Q ss_pred             ecCCCCEEccC---ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC-CCCCeeeeCcceEEEEceeCCccCCCe
Q psy13120         71 VNDNAPEFITA---NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS-EATPFSLGPVDGLLRVAQKLDREIKSN  146 (384)
Q Consensus        71 vNd~~P~f~~~---~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~-~~~~F~i~~~~G~i~~~~~ld~e~~~~  146 (384)
                      +|||+|.|...   +...|+|++++|+.++++.|+|+|.+.+  ++|+|..+ ..+.|.|++.+|.|++.+.||+|....
T Consensus       104 vNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~~~~F~I~~~tG~i~~~~~ld~e~~~~  181 (419)
T 3ubh_A          104 VNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDME  181 (419)
T ss_dssp             CCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESSSSCEEECTTTCEEEECSSSCCCBTCE
T ss_pred             CCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCCCCeEEEeCCceEEEEecccccccccE
Confidence            99999999876   5789999999999999999999999877  89999865 457999999999999999999999999


Q ss_pred             EEEEEEEEeCCCC----CCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEE-
Q psy13120        147 YTLEIKAKDRGEP----SKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTII-  221 (384)
Q Consensus       147 ~~l~V~a~d~~~~----~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~-  221 (384)
                      |.|+|+|+|++++    .+++++.++|.|.| |||+|.|....|.+.|+|+.++|+.|+++.|+|+|   ++.++|+|. 
T Consensus       182 y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~  257 (419)
T 3ubh_A          182 YVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKA  257 (419)
T ss_dssp             EEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEE
T ss_pred             EEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEec
Confidence            9999999998764    45778889999999 99999999999999999999999999999999987   678999997 


Q ss_pred             eCCCCCCeEEECCCcEEEEcccCCccccC---eEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeE-
Q psy13120        222 SGDDNHDLTISEDNGLLRIAKNLNYERKA---QYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLA-  297 (384)
Q Consensus       222 ~~~~~~~f~i~~~~G~l~~~~~lD~e~~~---~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~-  297 (384)
                      .++..++|.|++.+|.|++.++||||...   .|.|+|+|+|.+++     .+++++|+|.|.|+|||+|+|....|.. 
T Consensus       258 ~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~~~-----~s~~~~v~I~V~DvNDn~P~f~~~~~~~~  332 (419)
T 3ubh_A          258 QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG-----FSTSVDLTIRVTDVNDNAPKFELPDYQAH  332 (419)
T ss_dssp             SSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTTTS-----CEEEEEEEEEEECCCCCCCEESSSEEEEE
T ss_pred             CCCCCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEeCCCC-----cEEEEEEEEEEEccCCCCCcccCCcceeE
Confidence            46777899999999999999999999875   79999999975443     2788999999999999999999988987 


Q ss_pred             EEcCCCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCccc-ccEEE
Q psy13120        298 LVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREK-QAEYL  376 (384)
Q Consensus       298 ~v~e~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~-~~~~~  376 (384)
                      .|.|+..+  |+.++++.|+|+|.+. |+.++|+|.+               ++|.|++ +|.|++++.||||. ...|+
T Consensus       333 ~v~E~~~~--gt~v~~v~A~D~D~g~-n~~v~Y~i~~---------------~~F~Id~-~G~i~~~~~ld~E~~~~~y~  393 (419)
T 3ubh_A          333 NVDEDIPL--GTSILRVKAMDSDSGS-NAEIEYLVSD---------------DHFAVDS-NGIIVNNKQLDADNNNAYYE  393 (419)
T ss_dssp             EEETTCCT--TCEEEECCEECSSCGG-GGCEEEEESC---------------TTEEECT-TCEEEECSCSSSSCTTCEEE
T ss_pred             EecCCCCC--CCEEEEEEEEeCCCCC-CCEEEEEEcC---------------CcEEECC-CeEEEECcccCcccCCceEE
Confidence            79999944  8999999999999988 8999999964               4799998 89999999999998 68999


Q ss_pred             EEEEEEcC
Q psy13120        377 LTLQAMDS  384 (384)
Q Consensus       377 l~V~a~D~  384 (384)
                      |+|.|+|+
T Consensus       394 l~V~a~D~  401 (419)
T 3ubh_A          394 FIVTAKDK  401 (419)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEEC
Confidence            99999995

>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*

Probab=100.00  E-value=2.3e-64  Score=518.11  Aligned_cols=361  Identities=30%  Similarity=0.445  Sum_probs=330.2

Q ss_pred             CccEEEEEEeCCC----CCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120          2 NGRLEYSIVSGDD----EEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE   77 (384)
Q Consensus         2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~   77 (384)
                      |+.|+|+|.+++.    .++|.|++.+|.|++++.||||....|.|+|+|+|.++++   ++.++.|+|+|.|+|||+|.
T Consensus       186 ~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~g~~~---~~~~~~v~I~V~DvNDn~P~  262 (880)
T 1q55_A          186 FNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSP---VEEPMEITINVIDQNDNRPK  262 (880)
T ss_dssp             SSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCB---CSCCEEEEEEEECCSCCCCE
T ss_pred             CceEEEEEECCCCCCCcCCEEEEECCcCEEEECCccCccccCccEEEEEEEECCCCc---eeeeEEEEEEEEecCCCCCC
Confidence            6789999987643    3689999999999999999999999999999999998754   57789999999999999999


Q ss_pred             EccC-ceeEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcCC-----CCCeeeeCcceEEEEc-eeCCccCCCeE
Q psy13120         78 FITA-NETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINSE-----ATPFSLGPVDGLLRVA-QKLDREIKSNY  147 (384)
Q Consensus        78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~---~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~-~~ld~e~~~~~  147 (384)
                      |... |.++|+|++++|+.++++.|+|+|.+   .|+.++|+|.++.     .+.|.|++.+|.|++. +.||||....|
T Consensus       263 F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y  342 (880)
T 1q55_A          263 FTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEY  342 (880)
T ss_dssp             ESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEE
T ss_pred             ccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHccee
Confidence            9988 89999999999999999999999998   6889999998764     3689999999999985 78999999999


Q ss_pred             EEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCC--CCCCceEEEEEEeCCC
Q psy13120        148 TLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLD--DGINGRVRYTIISGDD  225 (384)
Q Consensus       148 ~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D--~~~~~~i~y~i~~~~~  225 (384)
                      .|+|+|+|.+++++++.++|+|+|.|+|||+|.|....|.+.|+|+ ++|+.|+++.|+|+|  .+.++.++|+|.+ +.
T Consensus       343 ~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~  420 (880)
T 1q55_A          343 TLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NE  420 (880)
T ss_dssp             EEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CT
T ss_pred             EEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec-CC
Confidence            9999999998888999999999999999999999999999999999 999999999999999  5678899999986 77


Q ss_pred             CCCeEEE--C--CCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcC
Q psy13120        226 NHDLTIS--E--DNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE  301 (384)
Q Consensus       226 ~~~f~i~--~--~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e  301 (384)
                      .+.|.|+  +  .+|.|++.++||||....|.|+|+|+|++.... +..+++++|+|+|.|+|| +|+|.+..|.+.|.|
T Consensus       421 ~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~-~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~E  498 (880)
T 1q55_A          421 GGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSV-PLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSE  498 (880)
T ss_dssp             TSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSS-CCCCCCEEEEEEEECCCC-CCEESSCEECCCBCT
T ss_pred             CceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCC-CCcceeEEEEEEEEeCCC-CCEEecCceEEEEeC
Confidence            7899995  3  579999999999999999999999999874211 013688999999999999 999999999999999


Q ss_pred             CCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccc----cEEEE
Q psy13120        302 NTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQ----AEYLL  377 (384)
Q Consensus       302 ~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~----~~~~l  377 (384)
                      +..  .|+.++++.|+|+|.+. ++.++|+|..            +..++|.||+.+|.|++.+.||||..    ..|+|
T Consensus       499 n~~--~Gt~V~~v~A~D~D~g~-n~~v~Ysi~~------------~~~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l  563 (880)
T 1q55_A          499 DLS--RGEKIISLVAQDPDKQQ-IQKLSYFIGN------------DPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTV  563 (880)
T ss_dssp             TCC--SSEEEEECCEECCCTTC-CCCEEEEECC------------CSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEE
T ss_pred             CCC--CCCEEEEEEEEeCCCCC-CCcEEEEECC------------CCCCCEEEeCCccEEEECCccCcccccCCCCEEEE
Confidence            994  48999999999999887 8999999986            56789999999999999999999997    89999


Q ss_pred             EEEEEcC
Q psy13120        378 TLQAMDS  384 (384)
Q Consensus       378 ~V~a~D~  384 (384)
                      +|.|+|+
T Consensus       564 ~V~A~D~  570 (880)
T 1q55_A          564 IMLVTDD  570 (880)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEEC
Confidence            9999995

>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}

Probab=100.00  E-value=1.1e-60  Score=471.32  Aligned_cols=360  Identities=29%  Similarity=0.402  Sum_probs=317.2

Q ss_pred             CccEEEEEEeCCCC----CcEEEeCCCcEEEECc-cCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCC
Q psy13120          2 NGRLEYSIVSGDDE----EIFTINPSNGTLSNLK-HLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAP   76 (384)
Q Consensus         2 ~~~i~Y~i~~~~~~----~~F~id~~tG~i~~~~-~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P   76 (384)
                      |+.++|+|.++.+.    ++|+|++.+|.|++.+ .||||....|.|+|+|+|+++.+..++++++.|+|+|.|+|||+|
T Consensus       142 n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P  221 (559)
T 3q2w_A          142 NGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPP  221 (559)
T ss_dssp             GGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCC
T ss_pred             ceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCC
Confidence            67899999876553    6899999999999987 999999999999999999876443347999999999999999999


Q ss_pred             EEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCC--CceEEEEEEcCC-CCCeee----eCcceEEEEceeCCccCCCeEE
Q psy13120         77 EFITA-NETTIPENSPLNTVVAALKAIDRDEGQ--NSYVEYSIINSE-ATPFSL----GPVDGLLRVAQKLDREIKSNYT  148 (384)
Q Consensus        77 ~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~--~~~~~y~l~~~~-~~~F~i----~~~~G~i~~~~~ld~e~~~~~~  148 (384)
                      .|... |...|+|+. +|+.++++.|+|+|.+.  ++.++|+|.++. .+.|.|    +..+|.|++.++||||....|.
T Consensus       222 ~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~  300 (559)
T 3q2w_A          222 EFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFV  300 (559)
T ss_dssp             EESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEE
T ss_pred             ccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEE
Confidence            99988 899999997 89999999999999975  557999998774 688999    5789999999999999999999


Q ss_pred             EEEEEEeCC------CCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEe
Q psy13120        149 LEIKAKDRG------EPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIIS  222 (384)
Q Consensus       149 l~V~a~d~~------~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~  222 (384)
                      |+|.|+|++      .+++++.++|+|.|.|+|| +|.|....|.+.|.|+.++|+.|+++.|+|+|.+.++.++|+|.+
T Consensus       301 l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~  379 (559)
T 3q2w_A          301 LTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLS  379 (559)
T ss_dssp             EEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEE
T ss_pred             EEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEcc
Confidence            999999974      2568899999999999999 699999999999999999999999999999999989999999985


Q ss_pred             CCCCCCeEEECCCcEEEEcccCCcccc----CeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEE
Q psy13120        223 GDDNHDLTISEDNGLLRIAKNLNYERK----AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLAL  298 (384)
Q Consensus       223 ~~~~~~f~i~~~~G~l~~~~~lD~e~~----~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~  298 (384)
                       +..++|.|++.+|.|++.+.||||..    ..|+|+|+|+|++.+++    +++++|+|.|.|+|||+|.|.+..+  .
T Consensus       380 -~~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A~D~g~p~~----ss~~~v~I~V~DvNDn~P~f~~~~~--~  452 (559)
T 3q2w_A          380 -DPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPPM----SGTGTLQIYLLDINDNAPQVLPQEA--E  452 (559)
T ss_dssp             -CTTCCEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEEEECSSSCC----EEEEEEEEEEECCSCCCCEESCTTC--C
T ss_pred             -CCccceEecCCceEEEEccccCcccccccCCEEEEEEEEEcCCCCcc----eEEEEEEEEEEEccCCCCcccCCce--E
Confidence             45688999999999999999999986    89999999999998875    8899999999999999999986544  5


Q ss_pred             EcCCCCCCCceEEEEEEEecCCCCCCCc-eEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEc-ccCCcccccEEE
Q psy13120        299 VNENTLPGPSFRIMTVQAHDADSLPFNG-LVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLL-KSLDREKQAEYL  376 (384)
Q Consensus       299 v~e~~~~~~g~~i~~v~a~D~D~~~~~~-~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~-~~ld~e~~~~~~  376 (384)
                      ++|+.  +  ..+++|.|+|+|.+. ++ +++|+|...         .++..+.|+|++.+|.+.+. ..++++..+.|.
T Consensus       453 v~e~~--~--~~v~~v~A~D~D~~~-n~~~~~ysl~~~---------~~~~~~~f~i~~~~G~~~~~~~~~~~~~~~~~~  518 (559)
T 3q2w_A          453 TCETP--E--PNSINITALDYDIDP-NAGPFAFDLPLS---------PVTIKRNWTINRLNGDFAQLNLKIKFLEAGIYE  518 (559)
T ss_dssp             CCSCC--C--TTCEEECEECSCCTT-SSSSCEEECCSS---------SHHHHHHEEEEECSSSCEEEEECSCC-CCEEEE
T ss_pred             EeecC--C--CcEEEEEEEcCCCCC-CCCCEEEEEcCC---------CCccCCCeEEEecCCCEEEEEeccCcccCcEEE
Confidence            77883  2  236799999999987 55 899999851         00235789999999998655 468999999999


Q ss_pred             EEEEEEcC
Q psy13120        377 LTLQAMDS  384 (384)
Q Consensus       377 l~V~a~D~  384 (384)
                      |.|+|+|+
T Consensus       519 l~V~~~D~  526 (559)
T 3q2w_A          519 VPIIITDS  526 (559)
T ss_dssp             EEEEEECS
T ss_pred             EEEEEEEC
Confidence            99999995

>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}

Probab=100.00  E-value=5.7e-60  Score=465.32  Aligned_cols=353  Identities=28%  Similarity=0.445  Sum_probs=311.9

Q ss_pred             CccEEEEEEeCCC----CCcEEEeCCCcEEEE-CccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCC
Q psy13120          2 NGRLEYSIVSGDD----EEIFTINPSNGTLSN-LKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAP   76 (384)
Q Consensus         2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~-~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P   76 (384)
                      |+.++|+|.++++    .++|+|++.+|.|++ .+.||||....|.|+|+|+|+++++   +++++.|+|+|.|+|||+|
T Consensus       143 N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~---~s~t~~v~I~V~DvNDn~P  219 (550)
T 3q2v_A          143 NAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEG---LSTTAKAVITVKDINDNAP  219 (550)
T ss_dssp             GGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTS---CCCEEEEEEEEECCSCSCC
T ss_pred             ceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCC---eeEEEEEEEEecccCCCCC
Confidence            6899999988653    468999999999998 4799999999999999999987754   6999999999999999999


Q ss_pred             EEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCce--EEEEEEcCCCCCeeee----CcceEEEEceeCCccCCCeEEE
Q psy13120         77 EFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSY--VEYSIINSEATPFSLG----PVDGLLRVAQKLDREIKSNYTL  149 (384)
Q Consensus        77 ~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~--~~y~l~~~~~~~F~i~----~~~G~i~~~~~ld~e~~~~~~l  149 (384)
                      .|... |...|+|+ ++|+.++++.|+|+|.+.++.  ++|+|.+...+.|.|+    +.+|.|++.++||||....|.|
T Consensus       220 ~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l  298 (550)
T 3q2v_A          220 VFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVNDPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYIL  298 (550)
T ss_dssp             EESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESSCSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEE
T ss_pred             EEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEeCCCCcEEEEecCCCccEEEEecccCCccccceEEE
Confidence            99988 99999999 999999999999999987764  6799998777899998    6899999999999999999999


Q ss_pred             EEEEEeCCC---CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCC
Q psy13120        150 EIKAKDRGE---PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDN  226 (384)
Q Consensus       150 ~V~a~d~~~---~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~  226 (384)
                      +|.|+|++.   +.+++.++|+|.|.|+|| +|.|....|.+.|+|+.++|+.|+++.|+|+|.+.++.++|+|. ++..
T Consensus       299 ~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~-~~~~  376 (550)
T 3q2v_A          299 HVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIW-RDTA  376 (550)
T ss_dssp             EEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEE-ECTT
T ss_pred             EEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEe-cCCC
Confidence            999999873   457899999999999999 99999999999999999999999999999999998999999997 4567


Q ss_pred             CCeEEECCCcEEEEcccCCcccc-----CeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcC
Q psy13120        227 HDLTISEDNGLLRIAKNLNYERK-----AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE  301 (384)
Q Consensus       227 ~~f~i~~~~G~l~~~~~lD~e~~-----~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e  301 (384)
                      ++|.|++.+|.|++.+.||||..     ..|.|+|+|+|++.++.    +++++|+|.|.|+|||+|+|.  .|...++|
T Consensus       377 ~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D~g~p~~----s~~~~v~I~V~DvNDn~P~~~--~~~~~v~e  450 (550)
T 3q2v_A          377 NWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIA----TGTGTLLLVLLDVNDNAPIPE--PRNMQFCQ  450 (550)
T ss_dssp             CCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEEEECCSSSCC----CEEEEEEEEEECCCCCCCEES--CSSCEEES
T ss_pred             CcEEEeCCCcEEEECCccCcccccccCCCEEEEEEEEEeCCCCcc----eeEEEEEEEEEeCCCCCCcCc--Ccccceee
Confidence            88999999999999999999998     89999999999998875    789999999999999999997  46778999


Q ss_pred             CCCCCCceEEEEEEEecCCCCCCCc-eEEEEEecCCCCCCCCcCCCCCCCceEE--eCCcceEEEcccCCcccccEEEEE
Q psy13120        302 NTLPGPSFRIMTVQAHDADSLPFNG-LVRYFLKDSGASSGNSQTQGGTGDLFRV--NSTTGDIYLLKSLDREKQAEYLLT  378 (384)
Q Consensus       302 ~~~~~~g~~i~~v~a~D~D~~~~~~-~i~y~l~~~~~~~~~~~~~~~~~~~f~I--d~~tG~i~~~~~ld~e~~~~~~l~  378 (384)
                      +...  +. +  |.|+|+|.+. ++ .++|+|.+            +....|.|  +..+|.+...+.+++|..+.|.|.
T Consensus       451 ~~~~--~~-~--v~A~D~D~~~-n~~~~~~~l~~------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~y~l~  512 (550)
T 3q2v_A          451 RNPQ--PH-I--ITILDPDLPP-NTSPFTAELTH------------GASVNWTIEYNDAAQESLILQPRKDLEIGEYKIH  512 (550)
T ss_dssp             SSCC--CE-E--EEEECCSCTT-SSSSCCCEEEE------------CCSSSCEEECCSTTSSEEEEECSCC----CEECE
T ss_pred             cCCC--cE-E--EEEECCCCCC-CCCCEEEEECC------------CCCCCeEEEEecCCCcEEEEEecccCCCceEEEE
Confidence            9843  43 3  9999999987 55 68999987            33334544  444599888888999999999999


Q ss_pred             EEEEcC
Q psy13120        379 LQAMDS  384 (384)
Q Consensus       379 V~a~D~  384 (384)
                      |+|+|+
T Consensus       513 V~a~D~  518 (550)
T 3q2v_A          513 LKLADN  518 (550)
T ss_dssp             EECCSS
T ss_pred             EEEEEC
Confidence            999995

>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1

Probab=100.00  E-value=1.8e-60  Score=468.13  Aligned_cols=351  Identities=29%  Similarity=0.402  Sum_probs=312.3

Q ss_pred             CccEEEEEEeCCC----CCcEEEeCCCcEEEEC-ccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCC
Q psy13120          2 NGRLEYSIVSGDD----EEIFTINPSNGTLSNL-KHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAP   76 (384)
Q Consensus         2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P   76 (384)
                      |+.|+|+|.++.+    .++|+|++.+|.|++. +.||||....|.|+|+|+|+++++   +++++.|+|.|.|+|||+|
T Consensus       149 n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~---~s~~~~v~I~V~DvNDn~P  225 (546)
T 1l3w_A          149 NGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG---LSVEGKAIIQITDANDNAP  225 (546)
T ss_dssp             TTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTS---CEEECCEEEEEECCCCCCC
T ss_pred             CCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCC---cceEEEEEEEEeecCCCCC
Confidence            6899999998763    4799999999999985 799999999999999999998754   6999999999999999999


Q ss_pred             EEccC-ceeEeeCCCCCCcEEEEEEEEeCC--CCCCceEEEEEEcCCCCCeeee----CcceEEEEceeCCccCCCeEEE
Q psy13120         77 EFITA-NETTIPENSPLNTVVAALKAIDRD--EGQNSYVEYSIINSEATPFSLG----PVDGLLRVAQKLDREIKSNYTL  149 (384)
Q Consensus        77 ~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D--~~~~~~~~y~l~~~~~~~F~i~----~~~G~i~~~~~ld~e~~~~~~l  149 (384)
                      .|... |...|+|+ ++|+.++++.|+|+|  .+.|+.++|+|.+...+.|.|+    ..+|.|++.++||||....|.|
T Consensus       226 ~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l  304 (546)
T 1l3w_A          226 IFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVL  304 (546)
T ss_dssp             CBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEE
T ss_pred             ccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEeCCCceEEEEecCCCCeEEEEECccCCcccccEEEE
Confidence            99988 99999999 999999999999999  6788899999998556789996    2689999999999999999999


Q ss_pred             EEEEEeCCC---CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCC
Q psy13120        150 EIKAKDRGE---PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDN  226 (384)
Q Consensus       150 ~V~a~d~~~---~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~  226 (384)
                      +|.|+|+++   |.+++.++|+|.|.|+|| +|.|....|.+.|.|+.++|+.|+++.|+|+|.+.++.++|+|.+ +..
T Consensus       305 ~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~-~~~  382 (546)
T 1l3w_A          305 QITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN-DPA  382 (546)
T ss_dssp             EECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC-CSS
T ss_pred             EEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECC-CCC
Confidence            999999863   467899999999999999 999999999999999999999999999999999889999999984 456


Q ss_pred             CCeEEECCCcEEEEcccCCcccc----CeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCC
Q psy13120        227 HDLTISEDNGLLRIAKNLNYERK----AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNEN  302 (384)
Q Consensus       227 ~~f~i~~~~G~l~~~~~lD~e~~----~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~  302 (384)
                      ++|.|++.+|.|++.+.||||..    ..|+|+|+|+|++.++.    +++++|+|+|.|+|||+|+|.+  +...++|+
T Consensus       383 ~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~g~p~~----s~~~~v~I~V~DvNDn~P~f~~--~~~~v~e~  456 (546)
T 1l3w_A          383 RWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVG----TGTGTLILHVLDVNDNGPVPSP--RVFTMCDQ  456 (546)
T ss_dssp             CCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSCC----CCCEEEECCBCCCCCSCCCBSC--CCEEECSS
T ss_pred             CcEEEeCCcEEEEECCccCCccccCCCCEEEEEEEEEECCCCCc----EeEEEEEEEEEECCCCcCCccC--ceEEEecC
Confidence            88999999999999999999997    89999999999988764    7889999999999999999984  37889999


Q ss_pred             CCCCCceEEEEEEEecCCCCCCCce-EEEEEecCCCCCCCCcCCCCCCCceEEeCCcc---eEEEcccCCcccccEEEEE
Q psy13120        303 TLPGPSFRIMTVQAHDADSLPFNGL-VRYFLKDSGASSGNSQTQGGTGDLFRVNSTTG---DIYLLKSLDREKQAEYLLT  378 (384)
Q Consensus       303 ~~~~~g~~i~~v~a~D~D~~~~~~~-i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG---~i~~~~~ld~e~~~~~~l~  378 (384)
                      ..+  |. +  +.|+|+|.+. ++. ++|+|.+            +....|.| ..+|   .+.+ +.+|+|..+.|.|.
T Consensus       457 ~~~--g~-v--v~A~D~D~~~-n~~~~~y~l~~------------~~~~~f~i-~~~g~~~~~~~-~~~d~e~~~~y~l~  516 (546)
T 1l3w_A          457 NPE--PQ-V--LTISDADIPP-NTYPYKVSLSH------------GSDLTWKA-ELDSKGTSMLL-SPTQQLKKGDYSIY  516 (546)
T ss_dssp             SCC--CE-E--EEBCCSSCTT-TTCCCCCBCCS------------CSSSSCBC-CBCTTSSEEEE-BCSSCCCSSCBCCE
T ss_pred             CCC--Ce-E--EEEEeCCCCC-CCccEEEEECC------------CCCCCEEE-eccCCceEEEe-cccccccCceEEEE
Confidence            854  65 3  9999999987 665 8999976            33457877 3344   4444 45589999999999


Q ss_pred             EEEEcC
Q psy13120        379 LQAMDS  384 (384)
Q Consensus       379 V~a~D~  384 (384)
                      |+|+|+
T Consensus       517 V~a~D~  522 (546)
T 1l3w_A          517 VLLSDA  522 (546)
T ss_dssp             EECCSS
T ss_pred             EEEEEC
Confidence            999995

>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*

Probab=100.00  E-value=3.5e-58  Score=472.22  Aligned_cols=352  Identities=29%  Similarity=0.410  Sum_probs=313.6

Q ss_pred             CccEEEEEEeCCC----CCcEEEeCCCcEEEEC-ccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCC
Q psy13120          2 NGRLEYSIVSGDD----EEIFTINPSNGTLSNL-KHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAP   76 (384)
Q Consensus         2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P   76 (384)
                      |+.|+|+|.++.+    .++|+||+.||.|++. +.||||....|.|+|+|+|+++++   ++++++|+|+|.|+|||+|
T Consensus       298 N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~---~s~~~~v~I~V~DvNDn~P  374 (880)
T 1q55_A          298 NGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG---LSVEGKAIIQITDANDNAP  374 (880)
T ss_dssp             TTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTS---CEEECCEEEEEECCCCCCC
T ss_pred             CcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCC---ccceeEEEEEEEeccCCCC
Confidence            6899999998763    4789999999999986 789999999999999999998754   6999999999999999999


Q ss_pred             EEccC-ceeEeeCCCCCCcEEEEEEEEeCC--CCCCceEEEEEEcCCCCCeeee--C--cceEEEEceeCCccCCCeEEE
Q psy13120         77 EFITA-NETTIPENSPLNTVVAALKAIDRD--EGQNSYVEYSIINSEATPFSLG--P--VDGLLRVAQKLDREIKSNYTL  149 (384)
Q Consensus        77 ~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D--~~~~~~~~y~l~~~~~~~F~i~--~--~~G~i~~~~~ld~e~~~~~~l  149 (384)
                      .|... |.+.|+|+ ++|+.|+++.|+|+|  .+.|+.++|+|.+...+.|.|+  +  .+|.|++.++||||....|.|
T Consensus       375 ~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l  453 (880)
T 1q55_A          375 IFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVL  453 (880)
T ss_dssp             CBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEE
T ss_pred             CccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEecCCCceEEEEecCCCceEEEecccCCCcccCCcEEE
Confidence            99988 99999999 999999999999999  6788899999988556789995  2  679999999999999999999


Q ss_pred             EEEEEeCCC---CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCC
Q psy13120        150 EIKAKDRGE---PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDN  226 (384)
Q Consensus       150 ~V~a~d~~~---~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~  226 (384)
                      +|.|+|++.   +.+++.++|+|+|.|+|| +|.|....|.+.|.|+.++|+.|+++.|+|+|.+.++.++|+|.+ +..
T Consensus       454 ~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~-~~~  531 (880)
T 1q55_A          454 QITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN-DPA  531 (880)
T ss_dssp             EECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC-CSS
T ss_pred             EEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECC-CCC
Confidence            999999863   467899999999999999 999999999999999999999999999999999889999999984 456


Q ss_pred             CCeEEECCCcEEEEcccCCcccc----CeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCC
Q psy13120        227 HDLTISEDNGLLRIAKNLNYERK----AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNEN  302 (384)
Q Consensus       227 ~~f~i~~~~G~l~~~~~lD~e~~----~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~  302 (384)
                      ++|.|++.+|.|++.+.||||..    ..|+|+|.|+|.+.++.    +++++|+|+|.|+|||+|+|.+.  ...++|+
T Consensus       532 ~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~D~g~p~~----sst~tv~I~V~DvNDn~P~f~~~--~~~v~E~  605 (880)
T 1q55_A          532 RWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVG----TGTGTLILHVLDVNDNGPVPSPR--VFTMCDQ  605 (880)
T ss_dssp             CCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSCC----CCCEEEECCBCCCCCSCCCBSCC--CEEECSS
T ss_pred             CCEEEeCCccEEEECCccCcccccCCCCEEEEEEEEEECCCCCc----EeEEEEEEEEEeCCCCCCCccCc--ceEEecC
Confidence            89999999999999999999997    89999999999987764    78899999999999999999843  7889999


Q ss_pred             CCCCCceEEEEEEEecCCCCCCCce-EEEEEecCCCCCCCCcCCCCCCCceEE--eCCcceEEEcccCCcccccEEEEEE
Q psy13120        303 TLPGPSFRIMTVQAHDADSLPFNGL-VRYFLKDSGASSGNSQTQGGTGDLFRV--NSTTGDIYLLKSLDREKQAEYLLTL  379 (384)
Q Consensus       303 ~~~~~g~~i~~v~a~D~D~~~~~~~-i~y~l~~~~~~~~~~~~~~~~~~~f~I--d~~tG~i~~~~~ld~e~~~~~~l~V  379 (384)
                      ..+  |. +  +.|+|+|.+. |+. ++|+|..            +....|.|  +..++.|.+. .++++..+.|.|.|
T Consensus       606 ~~~--g~-v--v~A~D~D~~~-n~~~~~ysl~~------------~~~~~f~i~~~g~~~~l~~~-~~d~~~~~~y~l~V  666 (880)
T 1q55_A          606 NPE--PQ-V--LTISDADIPP-NTYPYKVSLSH------------GSDLTWKAELDSKGTSMLLS-PTQQLKKGDYSIYV  666 (880)
T ss_dssp             SCC--CE-E--EEBCCSSCTT-TTCCCCCBCCS------------CSSSSCBCCBCTTSSEEEEB-CSSCCCSSCBCCEE
T ss_pred             CCC--Ce-E--EEEecCCCCC-CCceEEEEECC------------CCCCCeEEEcccceeEEEec-cCccccCCEEEEEE
Confidence            854  65 3  9999999988 665 8999976            33456776  4445567664 45799999999999


Q ss_pred             EEEcC
Q psy13120        380 QAMDS  384 (384)
Q Consensus       380 ~a~D~  384 (384)
                      +|+|+
T Consensus       667 ~a~D~  671 (880)
T 1q55_A          667 LLSDA  671 (880)
T ss_dssp             ECCSS
T ss_pred             EEEEC
Confidence            99985

>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}

Probab=100.00  E-value=2.1e-53  Score=390.09  Aligned_cols=277  Identities=36%  Similarity=0.569  Sum_probs=249.5

Q ss_pred             CccEEEEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccC
Q psy13120          2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITA   81 (384)
Q Consensus         2 ~~~i~Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~   81 (384)
                      |+.|+|+|.+++..++|.||+.+|.|++++.||||....|.|+|+|+|.++++  .++..+.|.|.|.|+|||+|.|...
T Consensus        32 ~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~--~~~~~~~v~I~V~DvNDn~P~F~~~  109 (322)
T 2a62_A           32 SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNK--PLEPPSEFIIKVQDINDNAPEFLNG  109 (322)
T ss_dssp             SCCCEEEEEETTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTTCS--EEEEEEEECEECCCCSCSCBCCSSS
T ss_pred             CCEEEEEEECCCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCCCC--cccceEEEEEEEEecCCCCCccCCC
Confidence            57899999887666799999999999999999999999999999999987532  2578899999999999999999988


Q ss_pred             -ceeEeeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCeeeeCcceEEEEc-eeCCccCCCeEEEEEEEEeC
Q psy13120         82 -NETTIPENSPLNTVVAALKAIDRDE---GQNSYVEYSIINSEATPFSLGPVDGLLRVA-QKLDREIKSNYTLEIKAKDR  156 (384)
Q Consensus        82 -~~~~v~E~~~~gt~v~~~~a~D~D~---~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~-~~ld~e~~~~~~l~V~a~d~  156 (384)
                       |.+.|+|++++|+.++++.|+|+|.   |.|+.++|+|.++. +.|.|++.+|.|++. +.||||....|.|+|.|+|+
T Consensus       110 ~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~-~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~  188 (322)
T 2a62_A          110 PYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQ-PYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDM  188 (322)
T ss_dssp             EEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECT-TTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEES
T ss_pred             ceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCC-CCEEEecCCCEEEecccCCCcccCCeEEEEEEEEEC
Confidence             9999999999999999999999996   77889999999874 689999999999998 89999999999999999999


Q ss_pred             CCCC--CceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEE--
Q psy13120        157 GEPS--KSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTIS--  232 (384)
Q Consensus       157 ~~~~--~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~--  232 (384)
                      |+|+  +++.++|+|+|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.+.++.++|+|..|+..+.|.|+  
T Consensus       189 g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d  268 (322)
T 2a62_A          189 GGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSD  268 (322)
T ss_dssp             CSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBCCBCC
T ss_pred             CCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEEecc
Confidence            8874  889999999999999999999999999999999999999999999999998889999999988888899999  


Q ss_pred             --CCCcEEEEcccCCccccCeEEEEEEEEECCCCCcc---eeeeeEEEEEEEEe
Q psy13120        233 --EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEE---RIRFDTATVSILVS  281 (384)
Q Consensus       233 --~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~---~~~~~~~~v~i~V~  281 (384)
                        +.+|.|++.++||||....|.|+|+|+|.+.++..   ..++++++|.|.|.
T Consensus       269 ~~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~g~pp~~~~~~~~s~~~~V~I~V~  322 (322)
T 2a62_A          269 AQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRFSSRGPFKDTATVKIVVE  322 (322)
T ss_dssp             TTTSEEEEEBCSCCCCSSCCEEEEEEEEECCCSSCTTSSCCCCCCCCEEEEEEC
T ss_pred             CCCceEEEEECCcCCcccCCeEEEEEEEEECCCCCccccCCCcccEEEEEEEEC
Confidence              45899999999999999999999999998876531   12357788888873

>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}

Probab=100.00  E-value=1e-52  Score=385.58  Aligned_cols=283  Identities=33%  Similarity=0.491  Sum_probs=254.7

Q ss_pred             ceeEeeCC--CCCCcEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCC
Q psy13120         82 NETTIPEN--SPLNTVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE  158 (384)
Q Consensus        82 ~~~~v~E~--~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~  158 (384)
                      ..+.|.|+  .+.|+.|+++. +|+|.+ ++.++|+|.++. .+.|.|++.+|.|++.++||||....|.|+|.|+|+++
T Consensus         5 ~~~~v~E~~~~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~   82 (322)
T 2a62_A            5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET   82 (322)
T ss_dssp             CCEECCCSCCCSSCEECCCCC-CCCCCS-SCCCEEEEEETTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTT
T ss_pred             ceeeeccccCCCCCEEEEEEE-EcCCCC-CCEEEEEEECCCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCC
Confidence            46789999  88999999986 899987 577999998764 46899999999999999999999999999999999865


Q ss_pred             -CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEeCCCCCCeEEECC
Q psy13120        159 -PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISED  234 (384)
Q Consensus       159 -~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~~f~i~~~  234 (384)
                       +++++.+.++|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.   +.++.++|+|.+++  ..|.|++.
T Consensus        83 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~  160 (322)
T 2a62_A           83 NKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQ--PYFSIEPE  160 (322)
T ss_dssp             CSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECT--TTEEECTT
T ss_pred             CCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCC--CCEEEecC
Confidence             4567889999999999999999999999999999999999999999999996   67889999998764  68999999


Q ss_pred             CcEEEEc-ccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEE
Q psy13120        235 NGLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMT  313 (384)
Q Consensus       235 ~G~l~~~-~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~  313 (384)
                      +|.|++. +.||||....|.|+|+|+|++.++.  .++++++|+|+|.|+|||+|.|.+..|.+.|.|+..  .|+.+++
T Consensus       161 tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~--~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~--~gt~v~~  236 (322)
T 2a62_A          161 TAIIKTALPNMDREAKEEYLVVIQAKDMGGHSG--GLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVV--LGTAIGR  236 (322)
T ss_dssp             TCCEEECSSCCCGGGCSEEEEEEEEEESCSSSS--CCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCS--SCCEEEE
T ss_pred             CCEEEecccCCCcccCCeEEEEEEEEECCCCCC--CceeEEEEEEEEEecCCCCCeecCCCceeEeECCCC--CCcEEEE
Confidence            9999998 8999999999999999999987641  137889999999999999999999999999999994  4889999


Q ss_pred             EEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEe----CCcceEEEcccCCcccccEEEEEEEEEcC
Q psy13120        314 VQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVN----STTGDIYLLKSLDREKQAEYLLTLQAMDS  384 (384)
Q Consensus       314 v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id----~~tG~i~~~~~ld~e~~~~~~l~V~a~D~  384 (384)
                      +.|+|+|.+. |+.++|+|..           ++..++|.|+    +.+|.|+++++||||....|.|+|+|+|+
T Consensus       237 v~A~D~D~g~-n~~i~Y~i~~-----------g~~~~~F~I~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~  299 (322)
T 2a62_A          237 VKANDQDIGE-NAQSSYDIID-----------GDGTALFEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAANI  299 (322)
T ss_dssp             EECCCSSCGG-GTCCEEEEC--------------CCSSBCCBCCTTTSEEEEEBCSCCCCSSCCEEEEEEEEECC
T ss_pred             EEEEeCCCCC-CceEEEEEEC-----------CCCCCcEEEeccCCCceEEEEECCcCCcccCCeEEEEEEEEEC
Confidence            9999999987 8899999976           2346899998    46899999999999999999999999984

>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A

Probab=100.00  E-value=4.3e-50  Score=368.78  Aligned_cols=272  Identities=25%  Similarity=0.427  Sum_probs=230.8

Q ss_pred             CccEEEEEEeCCC---------CCcEEEeCCCcEEEECccCCcCCC-----cEEEEEEEEEeCCCCCCCCceeEEEEEEE
Q psy13120          2 NGRLEYSIVSGDD---------EEIFTINPSNGTLSNLKHLDRETK-----SSYNLVVMATDMAKPPQKRLSSTTQVSIV   67 (384)
Q Consensus         2 ~~~i~Y~i~~~~~---------~~~F~id~~tG~i~~~~~lD~E~~-----~~~~l~v~a~d~~~~~~~~~s~~~~v~I~   67 (384)
                      |+.+.|+|..+++         ..+|+|++ +|.|++++.||||..     ..|.|+|+|.|++.++  ++++++.|+|.
T Consensus        19 ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~--~~s~~~~v~I~   95 (316)
T 3ubf_A           19 EGKSVFQLEKETDKETFKIRDDNPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGI--KYTDNQRVIIL   95 (316)
T ss_dssp             TTCEEEECCCSSTTCEEEESSCCSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC---------CCCEEEEEEEE
T ss_pred             CceEEEEEEcCCCcceEEEeCCCCeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCCCC--cccceEEEEEE
Confidence            4556666654433         24688887 999999999999984     5788899998887542  26899999999


Q ss_pred             EEeecCCCCEEccC---ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC-CCCCeeeeCcceEEEEceeCCccC
Q psy13120         68 IRDVNDNAPEFITA---NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS-EATPFSLGPVDGLLRVAQKLDREI  143 (384)
Q Consensus        68 V~dvNd~~P~f~~~---~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~-~~~~F~i~~~~G~i~~~~~ld~e~  143 (384)
                      |.|+|||+|.|...   |.+.|+|++++|+.++++.|+|+|.+.+  ++|+|..+ ..++|.|++.+|.|++.++||||.
T Consensus        96 V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~~tG~i~~~~~lD~e~  173 (316)
T 3ubf_A           96 VKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQL  173 (316)
T ss_dssp             EECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEEECTTTCEEEECSSCCCCT
T ss_pred             EEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEEEECCccEEEECCcCCccc
Confidence            99999999999876   5889999999999999999999999887  99999865 567999999999999999999999


Q ss_pred             CCeEEEEEEEEeCCC----CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEE
Q psy13120        144 KSNYTLEIKAKDRGE----PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYT  219 (384)
Q Consensus       144 ~~~~~l~V~a~d~~~----~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~  219 (384)
                      ...|.|+|.|+|+++    +++++.+.++|.|.| |||+|.|....|.+.|+|+.++|+.|+++.|+|+|   ++.++|+
T Consensus       174 ~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~  249 (316)
T 3ubf_A          174 DMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYT  249 (316)
T ss_dssp             TCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEE
T ss_pred             CcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEE
Confidence            999999999999875    457888999999999 99999999999999999999999999999999998   6789999


Q ss_pred             EE-eCCCCCCeEEECCCcEEEEcccCCcccc---CeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCC
Q psy13120        220 II-SGDDNHDLTISEDNGLLRIAKNLNYERK---AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNY  287 (384)
Q Consensus       220 i~-~~~~~~~f~i~~~~G~l~~~~~lD~e~~---~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~  287 (384)
                      |. .++..++|.|++.+|.|++.++||||..   ..|.|+|+|+|.+++     ++++++|+|+|.|+||||
T Consensus       250 i~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~dd~g~-----~~~~~~v~I~V~DvNDn~  316 (316)
T 3ubf_A          250 LKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG-----FSTSVDLTIRVTDVNDNA  316 (316)
T ss_dssp             EEEESSCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEEEEESSSS-----CEEEEEEEEEEECC----
T ss_pred             EEcCCCCCCeEEEECCeEEEEECCcCCccccCCCceEEEEEEEEECCCC-----CEEEEEEEEEEEecCCCC
Confidence            98 6788899999999999999999999998   799999999953333     278999999999999975

>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A

Probab=100.00  E-value=5.8e-48  Score=354.59  Aligned_cols=268  Identities=22%  Similarity=0.328  Sum_probs=222.7

Q ss_pred             EEEEEEEeCCCCCCceEEEEEEcCC----------CCCeeeeCcceEEEEceeCCccCC-----CeEEEEEEEEeCCCC-
Q psy13120         96 VAALKAIDRDEGQNSYVEYSIINSE----------ATPFSLGPVDGLLRVAQKLDREIK-----SNYTLEIKAKDRGEP-  159 (384)
Q Consensus        96 v~~~~a~D~D~~~~~~~~y~l~~~~----------~~~F~i~~~~G~i~~~~~ld~e~~-----~~~~l~V~a~d~~~~-  159 (384)
                      +.++.|+|+|.+.++.+.|+|..+.          .++|.|++ +|.|++.++||||..     ..|.|+|.|.|++.| 
T Consensus         6 ~~~~~atd~D~g~ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~   84 (316)
T 3ubf_A            6 TKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGI   84 (316)
T ss_dssp             EEEEEEESGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC-------
T ss_pred             eEEEEEEecCCCCCceEEEEEEcCCCcceEEEeCCCCeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCCCC
Confidence            4455555555555555555554332          35799998 999999999999984     478888899998765 


Q ss_pred             CCceeEEEEEEeccCCCCCCceeccc--eEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcE
Q psy13120        160 SKSSRTKFFIRLLDENDNNPIFDSKS--YSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGL  237 (384)
Q Consensus       160 ~~~~~~~v~I~V~dvnd~~P~f~~~~--~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~  237 (384)
                      .+++.++|+|.|.|+|||+|.|....  |.+.|+|+.++|+.|+++.|+|+|.+.+  ++|+|..++..+.|.|++.+|.
T Consensus        85 ~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~~tG~  162 (316)
T 3ubf_A           85 KYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGV  162 (316)
T ss_dssp             CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEEECTTTCE
T ss_pred             cccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEEEECCccE
Confidence            56899999999999999999998876  8999999999999999999999998765  9999998878889999999999


Q ss_pred             EEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEEe
Q psy13120        238 LRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAH  317 (384)
Q Consensus       238 l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~  317 (384)
                      |++.++||||....|.|+|+|+|++++...+.+++++.|+|.|.| ||++|+|.+..|.+.|.|+..+  |+.++++.|+
T Consensus       163 i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~--gt~v~~v~A~  239 (316)
T 3ubf_A          163 VRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKK--DSDIISIKAK  239 (316)
T ss_dssp             EEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCT--TCEEEECCEE
T ss_pred             EEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCC--CCEEEEEEEE
Confidence            999999999999999999999999864322224678899999999 9999999999999999999944  8899999999


Q ss_pred             cCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccc---cEEEEEEEEEc
Q psy13120        318 DADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQ---AEYLLTLQAMD  383 (384)
Q Consensus       318 D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~---~~~~l~V~a~D  383 (384)
                      |+|    ++.++|+|..          .++..++|.|++.+|.|++.++||||..   ..|.|+|+|+|
T Consensus       240 D~D----n~~i~Y~i~~----------~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~d  294 (316)
T 3ubf_A          240 SFA----DREIRYTLKA----------QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATE  294 (316)
T ss_dssp             CTT----CCCEEEEEEE----------ESSCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEEEEE
T ss_pred             eCC----CCEEEEEEEc----------CCCCCCeEEEECCeEEEEECCcCCccccCCCceEEEEEEEEE
Confidence            998    6789999973          1245789999999999999999999998   79999999994

>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}

Probab=100.00  E-value=7.7e-46  Score=353.24  Aligned_cols=272  Identities=22%  Similarity=0.333  Sum_probs=239.3

Q ss_pred             CcEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeC--------cceEEEEceeCCccCC---CeEEEEEEEEeCCCC-
Q psy13120         93 NTVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGP--------VDGLLRVAQKLDREIK---SNYTLEIKAKDRGEP-  159 (384)
Q Consensus        93 gt~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~--------~~G~i~~~~~ld~e~~---~~~~l~V~a~d~~~~-  159 (384)
                      ...+.+++|+|+|.|.|+.++|+|.++. ...|.|++        .+|.|++.++||||..   ..|.|.|.|+|.+.+ 
T Consensus         8 ~~Pv~~v~AtD~D~g~n~~v~Ysi~~~~~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~   87 (419)
T 3ubh_A            8 VRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNA   87 (419)
T ss_dssp             EEEEEEEEEEGGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCS
T ss_pred             ccceEEEEEEcccCCCCceEEEEEecCCCCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCC
Confidence            3468899999999999999999998763 56788886        7999999999999987   689999999998754 


Q ss_pred             --CCceeEEEEEEeccCCCCCCceeccc--eEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCC
Q psy13120        160 --SKSSRTKFFIRLLDENDNNPIFDSKS--YSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDN  235 (384)
Q Consensus       160 --~~~~~~~v~I~V~dvnd~~P~f~~~~--~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~  235 (384)
                        .+++.+.|+|.|.|+|||+|.|....  |.+.|+|++++|+.|+++.|+|+|.+.+  ++|+|..++..+.|.|++.+
T Consensus        88 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~~~~F~I~~~t  165 (419)
T 3ubh_A           88 GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERS  165 (419)
T ss_dssp             SSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESSSSCEEECTTT
T ss_pred             CCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCCCCeEEEeCCc
Confidence              56788999999999999999998876  7899999999999999999999998755  99999988888899999999


Q ss_pred             cEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEE
Q psy13120        236 GLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQ  315 (384)
Q Consensus       236 G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~  315 (384)
                      |.|++.+.||||....|.|+|+|+|++++...+..++++.++|.|.| ||++|.|.+..|.+.|.||..+  |+.++++.
T Consensus       166 G~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~--gt~v~~v~  242 (419)
T 3ubh_A          166 GVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKK--DSDIISIK  242 (419)
T ss_dssp             CEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCT--TCEEEECC
T ss_pred             eEEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCC--CcEEEEEE
Confidence            99999999999999999999999998764322223678889999999 9999999999999999999954  88999999


Q ss_pred             EecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCccccc---EEEEEEEEEc
Q psy13120        316 AHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQA---EYLLTLQAMD  383 (384)
Q Consensus       316 a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~~---~~~l~V~a~D  383 (384)
                      |+|+|    ++.++|+|..          .++..++|.|++.+|.|++.++||||...   .|.|+|+|+|
T Consensus       243 A~D~d----n~~i~Ysi~~----------~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~d  299 (419)
T 3ubh_A          243 AKSFA----DREIRYTLKA----------QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATE  299 (419)
T ss_dssp             EECSS----CCCCEEEEEE----------SSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEEC
T ss_pred             EecCC----CCceEEEEec----------CCCCCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEe
Confidence            99998    6789999974          12456899999999999999999999865   7999999995

>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}

Probab=100.00  E-value=4.6e-40  Score=284.18  Aligned_cols=202  Identities=32%  Similarity=0.506  Sum_probs=177.0

Q ss_pred             ceeEeeCCC--CCCcEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCC
Q psy13120         82 NETTIPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE  158 (384)
Q Consensus        82 ~~~~v~E~~--~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~  158 (384)
                      +.+.|.|+.  |.|+.++++ |+|+|.+ ++.++|+|.++. .+.|.|++.+|.|++.++||||....|.|+|.|+|+++
T Consensus         6 ~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~   83 (215)
T 2a4e_A            6 NQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDT   83 (215)
T ss_dssp             CEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred             eeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECCC
Confidence            578899994  578999988 7999988 678999999874 45899999999999999999999999999999999875


Q ss_pred             -CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEeCCCCCCeEEECC
Q psy13120        159 -PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISED  234 (384)
Q Consensus       159 -~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~~f~i~~~  234 (384)
                       +++++.+.+.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.   +.++.++|+|.+++  ..|.|++.
T Consensus        84 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~  161 (215)
T 2a4e_A           84 NRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ--PYFSVEAQ  161 (215)
T ss_dssp             CCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST--TTEEECTT
T ss_pred             CCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC--CcEEEeCC
Confidence             5678899999999999999999999999999999999999999999999997   77889999999764  58999999


Q ss_pred             CcEEEEc-ccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCc
Q psy13120        235 NGLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPV  289 (384)
Q Consensus       235 ~G~l~~~-~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~  289 (384)
                      +|.|++. +.||||....|.|+|+|+|++.+..  .++++++|+|+|.|+||++|.
T Consensus       162 tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~--~~s~~~~v~I~V~DvNDn~P~  215 (215)
T 2a4e_A          162 TGIIRTALPNMDREAKEEYHVVIQAKDMGGHMG--GLSGTTKVTITLTDDYKDDDK  215 (215)
T ss_dssp             TCEEEECSSCCCSSSCSEEEEEEEEETTTTCTT--CCEEEEEEEEEEEC-------
T ss_pred             ccEEEEcccCCCcccCCEEEEEEEEEECCCCCC--CceeEEEEEEEEEECCCCCCC
Confidence            9999998 9999999999999999999987521  137899999999999999995

>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A

Probab=100.00  E-value=2.9e-40  Score=285.36  Aligned_cols=204  Identities=30%  Similarity=0.486  Sum_probs=185.3

Q ss_pred             CCCCEEccC-ce--eEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeCcceEEEEceeCCccCCCeEE
Q psy13120         73 DNAPEFITA-NE--TTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGPVDGLLRVAQKLDREIKSNYT  148 (384)
Q Consensus        73 d~~P~f~~~-~~--~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~~~G~i~~~~~ld~e~~~~~~  148 (384)
                      |++|.|... +.  +.|+|++++|+.++++.|+|+|.   +.++|+|.++. .++|.|++.+|.|++.++||||....|.
T Consensus         3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~   79 (210)
T 3mvs_A            3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFT   79 (210)
T ss_dssp             CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEE
T ss_pred             CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEE
Confidence            459999987 55  79999999999999999999995   45899998763 4689999999999999999999999999


Q ss_pred             EEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCC
Q psy13120        149 LEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHD  228 (384)
Q Consensus       149 l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~  228 (384)
                      |+|.|+|+++   ...+.++|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.+.++.++|+|..  ..+.
T Consensus        80 l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~--~~~~  154 (210)
T 3mvs_A           80 VEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQP--PSPF  154 (210)
T ss_dssp             EEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESS--CCSS
T ss_pred             EEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeC--CCCC
Confidence            9999999865   3678999999999999999999999999999999999999999999999989999999974  3468


Q ss_pred             eEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCC
Q psy13120        229 LTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNY  287 (384)
Q Consensus       229 f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~  287 (384)
                      |.|++.+|.|++.++||||....|.|+|+|+|+++.+.   ++++++|+|+|.|+||+|
T Consensus       155 F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~---~s~~~~v~I~V~DvND~~  210 (210)
T 3mvs_A          155 FAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRP---LSTLANLAIIITDMQDMD  210 (210)
T ss_dssp             EEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSC---CEEEEEEEEEEECCCCCC
T ss_pred             EEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCC---CEEEEEEEEEEEccCCCC
Confidence            99999999999999999999999999999999985332   488999999999999965

>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.7e-42  Score=303.76  Aligned_cols=210  Identities=15%  Similarity=0.081  Sum_probs=184.3

Q ss_pred             EEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCC--CceEE------EEEEcCCCCCeeeeCcceEEEEceeCCccCCCeE
Q psy13120         77 EFITA-NETTIPENSPLNTVVAALKAIDRDEGQ--NSYVE------YSIINSEATPFSLGPVDGLLRVAQKLDREIKSNY  147 (384)
Q Consensus        77 ~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~--~~~~~------y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~  147 (384)
                      .|... |.+.|+|++++|+.|+++.|+|+|.+.  +..+.      |++..+..++|.|++.+|.|++.++||||....|
T Consensus         2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y   81 (246)
T 2x2u_A            2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQRSLDHSSWEKL   81 (246)
T ss_dssp             EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEESSCBCHHHHHHH
T ss_pred             CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcEEEEECCcCChhHhhhh
Confidence            47777 999999999999999999999999854  33444      5554445678999999999999999999999999


Q ss_pred             ------------EEEEEEEeCCCC--CCceeEEEEEEeccCCCCCCc----------eeccceEEEEecCCCCCcEEEEE
Q psy13120        148 ------------TLEIKAKDRGEP--SKSSRTKFFIRLLDENDNNPI----------FDSKSYSASVPENISVGATVLQV  203 (384)
Q Consensus       148 ------------~l~V~a~d~~~~--~~~~~~~v~I~V~dvnd~~P~----------f~~~~~~~~v~E~~~~g~~v~~v  203 (384)
                                  .|+|.|+|++.+  ++++.+.|.|+|.|+|||+|.          |....|.+.|+|+.++|+.|+++
T Consensus        82 ~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v  161 (246)
T 2x2u_A           82 SVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFR  161 (246)
T ss_dssp             HHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECS
T ss_pred             ccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEEE
Confidence                        999999999887  678899999999999999999          99999999999999999999999


Q ss_pred             EEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEE-CCCCCcceeeeeEEEEEEEEee
Q psy13120        204 SATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAED-CGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       204 ~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D-~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      .|+|+|.+.++.++|+|.+++ ...|.|++.+|.|++.++||||....|.|+|.|+| .++++    ++++++|+|+|.|
T Consensus       162 ~A~D~D~g~n~~i~Y~i~~~~-~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~----~ss~~~v~I~V~D  236 (246)
T 2x2u_A          162 LLPVQFLCPQISVAYRLLEGE-GLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGARE----EVVMVPFPVTVYD  236 (246)
T ss_dssp             CHHHHHHCTTSCEEEEEESCT-TSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CC----EEEEEEEEEEEEC
T ss_pred             EEEcCCCCCCcEEEEEEccCC-CCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCc----ceEEEEEEEEEEE
Confidence            999999999999999999665 67899999999999999999999999999999998 44444    4889999999999


Q ss_pred             cCCCCCccc
Q psy13120        283 INDNYPVFL  291 (384)
Q Consensus       283 vNd~~P~f~  291 (384)
                      +|||+|+|.
T Consensus       237 vNDn~P~F~  245 (246)
T 2x2u_A          237 EDDSAPEFE  245 (246)
T ss_dssp             SSCCSCCCC
T ss_pred             eCCCCCccC
Confidence            999999996

>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A

Probab=100.00  E-value=8.5e-38  Score=270.36  Aligned_cols=198  Identities=33%  Similarity=0.485  Sum_probs=181.0

Q ss_pred             eeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC-----CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCC
Q psy13120         83 ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE-----ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRG  157 (384)
Q Consensus        83 ~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~  157 (384)
                      .++|+|+++ |+.++.+.+.|.|.+.++.++|+|.++.     .+.|.|++.+|.|++.++||||....|.|+|.|+|.+
T Consensus         6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g   84 (215)
T 2qvi_A            6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN   84 (215)
T ss_dssp             CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred             cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence            678999998 8888899999999888999999999763     4789999999999999999999999999999999999


Q ss_pred             CCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC--CCCceEEEEEEeCC----CCCCeEE
Q psy13120        158 EPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD--GINGRVRYTIISGD----DNHDLTI  231 (384)
Q Consensus       158 ~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~--~~~~~i~y~i~~~~----~~~~f~i  231 (384)
                      ++++++.+.|+|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.  +.++.++|+|.+++    ..+.|.|
T Consensus        85 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~I  164 (215)
T 2qvi_A           85 GNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTI  164 (215)
T ss_dssp             TCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEE
T ss_pred             CCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEE
Confidence            99999999999999999999999999999999999999999999999999998  67899999999876    4678999


Q ss_pred             ECCCcEEEEc-ccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120        232 SEDNGLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       232 ~~~~G~l~~~-~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      ++.+|.|++. ++||||....|.|+|+|+|+++++.. .++++++|+|+|.|
T Consensus       165 d~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~-~ls~t~~v~I~V~D  215 (215)
T 2qvi_A          165 NNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTY-GLSNTATAVITVTD  215 (215)
T ss_dssp             CTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTT-SCCCEEEEEEEECC
T ss_pred             cCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCC-CcceEEEEEEEEEC
Confidence            9999999995 78999999999999999999876210 13789999999986

>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}

Probab=100.00  E-value=3.2e-37  Score=266.39  Aligned_cols=176  Identities=32%  Similarity=0.552  Sum_probs=156.2

Q ss_pred             CccEEEEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccC
Q psy13120          2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITA   81 (384)
Q Consensus         2 ~~~i~Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~   81 (384)
                      |+.|+|+|.+++...+|+||+.+|.|++++.||||....|.|+|+|+|.++++  ++++++.|.|.|.|+|||+|.|...
T Consensus        33 n~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~--~~~~~~~v~I~V~DvNDn~P~F~~~  110 (215)
T 2a4e_A           33 DGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTNR--PLEPPSEFIVKVQDINDNPPEFLHE  110 (215)
T ss_dssp             SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCC--EEEEEEEEEEEEECCCCCCCEESSS
T ss_pred             CCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECCCCC--cccccEEEEEEEeeCCCCCCCccCC
Confidence            57899999887666799999999999999999999999999999999997532  2688899999999999999999987


Q ss_pred             -ceeEeeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCeeeeCcceEEEEc-eeCCccCCCeEEEEEEEEeC
Q psy13120         82 -NETTIPENSPLNTVVAALKAIDRDE---GQNSYVEYSIINSEATPFSLGPVDGLLRVA-QKLDREIKSNYTLEIKAKDR  156 (384)
Q Consensus        82 -~~~~v~E~~~~gt~v~~~~a~D~D~---~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~-~~ld~e~~~~~~l~V~a~d~  156 (384)
                       |.+.|+|++++|+.|+++.|+|+|.   |.|+.++|+|.++. +.|.|++.+|.|+++ ++||||....|.|+|.|+|.
T Consensus       111 ~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~-~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~  189 (215)
T 2a4e_A          111 IYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ-PYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDM  189 (215)
T ss_dssp             SEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST-TTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETT
T ss_pred             ceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC-CcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEEC
Confidence             9999999999999999999999997   78889999999874 689999999999999 99999999999999999999


Q ss_pred             CCC--CCceeEEEEEEeccCCCCCCc
Q psy13120        157 GEP--SKSSRTKFFIRLLDENDNNPI  180 (384)
Q Consensus       157 ~~~--~~~~~~~v~I~V~dvnd~~P~  180 (384)
                      |+|  ++++.++|+|+|.|+|||+|+
T Consensus       190 g~~~~~~s~~~~v~I~V~DvNDn~P~  215 (215)
T 2a4e_A          190 GGHMGGLSGTTKVTITLTDDYKDDDK  215 (215)
T ss_dssp             TTCTTCCEEEEEEEEEEEC-------
T ss_pred             CCCCCCceeEEEEEEEEEECCCCCCC
Confidence            876  588999999999999999995

>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A

Probab=100.00  E-value=9.9e-37  Score=263.91  Aligned_cols=193  Identities=33%  Similarity=0.490  Sum_probs=177.1

Q ss_pred             eeEeeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcCC-----CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEe
Q psy13120         83 ETTIPENSP--LNTVVAALKAIDRDEGQNSYVEYSIINSE-----ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKD  155 (384)
Q Consensus        83 ~~~v~E~~~--~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d  155 (384)
                      .++|+|+.+  .|+.++++.| |.|.  ++.++|+|.+..     .++|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus         6 ~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D   82 (213)
T 3qrb_A            6 AISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVS   82 (213)
T ss_dssp             EEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred             CEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEe
Confidence            688999998  6788999998 7765  778999999853     34899999999999999999999999999999999


Q ss_pred             CCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCC---CCceEEEEEEeCC----CCCC
Q psy13120        156 RGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDG---INGRVRYTIISGD----DNHD  228 (384)
Q Consensus       156 ~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~---~~~~i~y~i~~~~----~~~~  228 (384)
                      .+++++++.+.++|.|.|+|||+|.|....|.+.|.|+.++|+.|+++.|+|+|.+   .++.++|+|.+++    ..+.
T Consensus        83 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~  162 (213)
T 3qrb_A           83 SNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNM  162 (213)
T ss_dssp             TTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCS
T ss_pred             CCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCe
Confidence            99988999999999999999999999999999999999999999999999999998   7899999998765    4568


Q ss_pred             eEEECCCcEEEEc-ccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120        229 LTISEDNGLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       229 f~i~~~~G~l~~~-~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      |.|++.+|.|++. +.||||....|.|+|+|+|.+.++.    +++++|+|+|.|
T Consensus       163 F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~----s~t~~v~I~V~D  213 (213)
T 3qrb_A          163 FTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGL----STTAKAVITVKD  213 (213)
T ss_dssp             EEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSC----EEEEEEEEEEEC
T ss_pred             EEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCc----eEEEEEEEEEEC
Confidence            9999999999997 7899999999999999999887764    889999999986

>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}

Probab=100.00  E-value=1.4e-35  Score=254.38  Aligned_cols=190  Identities=34%  Similarity=0.474  Sum_probs=173.2

Q ss_pred             ceeEeeCCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCC
Q psy13120         82 NETTIPENSPLN--TVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE  158 (384)
Q Consensus        82 ~~~~v~E~~~~g--t~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~  158 (384)
                      ..+.|+||.+.|  ..++++. +|+|.+.+   +|+|.++. .++|.|++.+|.|++.++||||....|.|+|.|+|++.
T Consensus         5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~   80 (203)
T 3ppe_A            5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRN   80 (203)
T ss_dssp             SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTT
T ss_pred             ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCC
Confidence            468999999988  8888988 89998766   99999874 45899999999999999999999999999999999987


Q ss_pred             C-CCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEeCCCCCCeEEECC
Q psy13120        159 P-SKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISED  234 (384)
Q Consensus       159 ~-~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~~f~i~~~  234 (384)
                      | ++++.+.++|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.   +.++.++|+|.+++  ..|.|+ .
T Consensus        81 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~--~~F~I~-~  157 (203)
T 3ppe_A           81 NRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN--EYFTVD-D  157 (203)
T ss_dssp             TEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST--TTEEEC-T
T ss_pred             CCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC--CcEEEe-C
Confidence            6 678899999999999999999999999999999999999999999999994   67889999999765  489999 9


Q ss_pred             CcEEEEc-ccCCccccCeEEEEEEEEEC-CCCCcceeeeeEEEEEEEEee
Q psy13120        235 NGLLRIA-KNLNYERKAQYSLTIQAEDC-GGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       235 ~G~l~~~-~~lD~e~~~~~~l~V~a~D~-~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      +|.|++. ++||||....|.|+|+|+|+ +.++    ++++++|+|+|.|
T Consensus       158 tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~----~s~t~~v~I~V~D  203 (203)
T 3ppe_A          158 SGVIFTARADLDRESQSAYEIIVKAKDALGLTG----ESSTATVIIRLTD  203 (203)
T ss_dssp             TSEEEESCSCCCTTTCSEEEEEEEEEETTCCCC----SSSEEEEEEEEEC
T ss_pred             CeEEEECCcCCCcccCCEEEEEEEEEeCCCCCC----CeEEEEEEEEEEC
Confidence            9999998 99999999999999999998 4444    3789999999986

>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A

Probab=100.00  E-value=4.1e-36  Score=260.96  Aligned_cols=193  Identities=27%  Similarity=0.400  Sum_probs=175.0

Q ss_pred             ceeEeeCCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcCC-----CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEE
Q psy13120         82 NETTIPENSPLN--TVVAALKAIDRDEGQNSYVEYSIINSE-----ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAK  154 (384)
Q Consensus        82 ~~~~v~E~~~~g--t~v~~~~a~D~D~~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~  154 (384)
                      ..+.|+|+.+.|  +.++++.|.|+|.    .++|+|.+..     .+.|.|++.+|.|++.++||||....|.|+|.|+
T Consensus         6 ~~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~   81 (218)
T 3k5r_A            6 SPILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETT   81 (218)
T ss_dssp             CCEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred             CcEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEE
Confidence            478999999988  8899999988775    4899998642     4789999999999999999999999999999999


Q ss_pred             eCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC--CCCceEEEEEEeCCCC----CC
Q psy13120        155 DRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD--GINGRVRYTIISGDDN----HD  228 (384)
Q Consensus       155 d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~--~~~~~i~y~i~~~~~~----~~  228 (384)
                      |.+++++++.+.|+|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.  +.++.++|+|.++...    +.
T Consensus        82 D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~  161 (218)
T 3k5r_A           82 DASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNM  161 (218)
T ss_dssp             CSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCS
T ss_pred             ECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCE
Confidence            99998899999999999999999999999999999999999999999999999998  6789999999976543    67


Q ss_pred             eEEECCCcEEEEc---ccCCccc--cCeEEEEEEEEECC--CCCcceeeeeEEEEEEEEee
Q psy13120        229 LTISEDNGLLRIA---KNLNYER--KAQYSLTIQAEDCG--GDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       229 f~i~~~~G~l~~~---~~lD~e~--~~~~~l~V~a~D~~--~~~~~~~~~~~~~v~i~V~d  282 (384)
                      |.|++.+|.|++.   +.||||.  ...|.|.|+|+|++  .++.    +++++|+|+|.|
T Consensus       162 F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~----sst~~v~I~V~D  218 (218)
T 3k5r_A          162 FYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGL----TGTATATIVIDD  218 (218)
T ss_dssp             EEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTC----EEEEEEEEEEEC
T ss_pred             EEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCe----eEEEEEEEEEEC
Confidence            9999999999987   6999999  67999999999998  5543    889999999986

>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A

Probab=100.00  E-value=3.6e-36  Score=259.66  Aligned_cols=183  Identities=28%  Similarity=0.474  Sum_probs=168.3

Q ss_pred             CCCCceeccceE--EEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEE
Q psy13120        176 DNNPIFDSKSYS--ASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYS  253 (384)
Q Consensus       176 d~~P~f~~~~~~--~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~  253 (384)
                      |++|.|....|.  +.|+|++++|+.|+++.|+|+|.   +.+.|+|.+++..++|.|++.+|.|++.++||||....|.
T Consensus         3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~   79 (210)
T 3mvs_A            3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFT   79 (210)
T ss_dssp             CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEE
T ss_pred             CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEE
Confidence            459999999887  79999999999999999999994   4689999866666789999999999999999999999999


Q ss_pred             EEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEEecCCCCCCCceEEEEEe
Q psy13120        254 LTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLK  333 (384)
Q Consensus       254 l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~  333 (384)
                      |+|.|+|+++       ..+++|+|+|.|+|||+|.|.+..|.+.|.|+..  .|+.++++.|+|+|.+. ++.++|+|.
T Consensus        80 l~v~a~D~~~-------~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~--~gt~v~~v~A~D~D~g~-n~~v~Y~i~  149 (210)
T 3mvs_A           80 VEFSVSDHQG-------VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTP--VGTPIFIVNATDPDLGA-GGSVLYSFQ  149 (210)
T ss_dssp             EEEEEECSSC-------EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCC--TTCEEEECCEECCSSGG-GGCEEEEES
T ss_pred             EEEEEEeCCC-------CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCC--CCCEEEEEEEEeCCCCC-CceEEEEEe
Confidence            9999999875       3568999999999999999999999999999994  48899999999999988 899999997


Q ss_pred             cCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccccEEEEEEEEEcC
Q psy13120        334 DSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS  384 (384)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D~  384 (384)
                      +             ..++|.|++.+|.|+++++||||....|.|+|+|+|+
T Consensus       150 ~-------------~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~  187 (210)
T 3mvs_A          150 P-------------PSPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQ  187 (210)
T ss_dssp             S-------------CCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEEC
T ss_pred             C-------------CCCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEEC
Confidence            5             3579999999999999999999999999999999995

>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}

Probab=100.00  E-value=1.9e-36  Score=260.82  Aligned_cols=195  Identities=34%  Similarity=0.544  Sum_probs=169.0

Q ss_pred             ceeEeeCCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcCCC-CCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCC-
Q psy13120         82 NETTIPENSPLN--TVVAALKAIDRDEGQNSYVEYSIINSEA-TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRG-  157 (384)
Q Consensus        82 ~~~~v~E~~~~g--t~v~~~~a~D~D~~~~~~~~y~l~~~~~-~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~-  157 (384)
                      ..+.|+|+.+.+  +.++++ |+|+|.+ ++.++|+|.++.. ++|.|++.+|.|++.++||||....|.|+|.|+|++ 
T Consensus         5 ~~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~   82 (207)
T 3lnd_A            5 NQFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRT   82 (207)
T ss_dssp             CCEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSS
T ss_pred             cccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCC
Confidence            357899998855  588888 8999998 5679999987754 589999999999999999999999999999999987 


Q ss_pred             CCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEeCCCCCCeEEECC
Q psy13120        158 EPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISED  234 (384)
Q Consensus       158 ~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~~f~i~~~  234 (384)
                      ++++++.+.++|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.   +.++.++|+|..++  ..|.|++.
T Consensus        83 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~--~~F~Id~~  160 (207)
T 3lnd_A           83 GRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVESE  160 (207)
T ss_dssp             CCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESG--GGEEECTT
T ss_pred             CCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCC--CCEEEcCC
Confidence            46788899999999999999999999999999999999999999999999998   77889999999764  48999999


Q ss_pred             CcEEEEc-ccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120        235 NGLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       235 ~G~l~~~-~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      +|.|++. +.||||....|.|+|+|+|++.+..  .++++++|+|+|.|
T Consensus       161 tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~--~~s~t~~v~I~V~D  207 (207)
T 3lnd_A          161 TGIIKTALLNMDRENREQYQVVIQAKDMGGQMG--GLSGTTTVNITLTD  207 (207)
T ss_dssp             TCEEEECCSSCCC--CCEEEEEEEEESGGGCTT--CBEEEEEEEEEEEC
T ss_pred             CcEEEECcccCCcccCCEEEEEEEEEECCCCCC--CcEeEEEEEEEEeC
Confidence            9999999 9999999999999999999886521  13789999999986

>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A

Probab=100.00  E-value=1.4e-34  Score=250.39  Aligned_cols=169  Identities=28%  Similarity=0.403  Sum_probs=156.1

Q ss_pred             CccEEEEEEeC----CCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120          2 NGRLEYSIVSG----DDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE   77 (384)
Q Consensus         2 ~~~i~Y~i~~~----~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~   77 (384)
                      |+.|+|+|.++    ++.++|.|++.+|.|++++.||||....|.|+|+|+|.++++   +++++.|.|.|.|+|||+|.
T Consensus        31 n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~---~~~~~~v~I~V~DvNDn~P~  107 (213)
T 3qrb_A           31 ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEA---VEDPMEIVITVTDQNDNRPE  107 (213)
T ss_dssp             TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCB---CSCCEEEEEEEECCSCCCCE
T ss_pred             CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEeCCCCc---ccceEEEEEEEEEccCCCCc
Confidence            67899999874    344699999999999999999999999999999999998765   57889999999999999999


Q ss_pred             EccC-ceeEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcC-----CCCCeeeeCcceEEEEc-eeCCccCCCeE
Q psy13120         78 FITA-NETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINS-----EATPFSLGPVDGLLRVA-QKLDREIKSNY  147 (384)
Q Consensus        78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~---~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~-~~ld~e~~~~~  147 (384)
                      |... |.+.|+|+.++|+.++++.|+|+|.+   .|+.++|+|.++     ..+.|.|++.+|.|++. ++||||....|
T Consensus       108 F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y  187 (213)
T 3qrb_A          108 FTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTY  187 (213)
T ss_dssp             ESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCCEE
T ss_pred             cCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCceE
Confidence            9988 99999999999999999999999998   789999999875     24689999999999997 79999999999


Q ss_pred             EEEEEEEeCCCCCCceeEEEEEEecc
Q psy13120        148 TLEIKAKDRGEPSKSSRTKFFIRLLD  173 (384)
Q Consensus       148 ~l~V~a~d~~~~~~~~~~~v~I~V~d  173 (384)
                      .|.|.|+|.|+|++++.++++|+|.|
T Consensus       188 ~l~V~A~D~g~~~~s~t~~v~I~V~D  213 (213)
T 3qrb_A          188 TLVVQAADLQGEGLSTTAKAVITVKD  213 (213)
T ss_dssp             EEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred             EEEEEEEeCCCCCceEEEEEEEEEEC
Confidence            99999999999999999999999986

>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}

Probab=100.00  E-value=1e-36  Score=268.85  Aligned_cols=174  Identities=20%  Similarity=0.218  Sum_probs=153.0

Q ss_pred             EEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEE------------EEEEEEEeCCCCCCCCceeEEEEEEEEEeecCC
Q psy13120          7 YSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSY------------NLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDN   74 (384)
Q Consensus         7 Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~------------~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~   74 (384)
                      |+|..+ ..++|.||+.+|.|++++.||||....|            .|+|.|+|.+.+. ..+++++.|.|.|.|+|||
T Consensus        48 y~i~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~-~~~~~~~~v~I~V~DvNDn  125 (246)
T 2x2u_A           48 YRTRLH-ENNWIRIQEDTGLLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLRE-GECQWPGCARVYFSFFNTS  125 (246)
T ss_dssp             GGCEEE-ECCSEEECTTTCEEEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC--------CCCTTTEEEEEEEEESSC
T ss_pred             eeccCC-CCCEEEECCCcEEEEECCcCChhHhhhhccccCCCcccceEEEEEEEcCCCCC-CcccceEEEEEEEEECCCC
Confidence            555443 4478999999999999999999999999            9999999998752 1257889999999999999


Q ss_pred             CCE----------EccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEceeCCccC
Q psy13120         75 APE----------FITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREI  143 (384)
Q Consensus        75 ~P~----------f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~  143 (384)
                      +|.          |... |.+.|+|+.++|+.++++.|+|+|.+.|+.++|+|.++..++|.|++.+|.|++.++||||.
T Consensus       126 ~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~  205 (246)
T 2x2u_A          126 FPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQ  205 (246)
T ss_dssp             CCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTT
T ss_pred             CCccccccccccccCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccc
Confidence            999          9987 99999999999999999999999999999999999988778999999999999999999999


Q ss_pred             CCeEEEEEEEEe-CCCCCCceeEEEEEEeccCCCCCCcee
Q psy13120        144 KSNYTLEIKAKD-RGEPSKSSRTKFFIRLLDENDNNPIFD  182 (384)
Q Consensus       144 ~~~~~l~V~a~d-~~~~~~~~~~~v~I~V~dvnd~~P~f~  182 (384)
                      ...|.|+|.|+| .|+|+++++++|+|+|.|+|||+|.|.
T Consensus       206 ~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~  245 (246)
T 2x2u_A          206 REKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE  245 (246)
T ss_dssp             CSEEEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred             cceEEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence            999999999998 566889999999999999999999994

>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A

Probab=100.00  E-value=2.1e-34  Score=249.03  Aligned_cols=169  Identities=33%  Similarity=0.464  Sum_probs=156.4

Q ss_pred             CccEEEEEEeCC----CCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120          2 NGRLEYSIVSGD----DEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE   77 (384)
Q Consensus         2 ~~~i~Y~i~~~~----~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~   77 (384)
                      |+.|+|+|.+++    +.++|.|++.+|.|++++.||||....|.|+|+|+|.++++   +++++.|.|.|.|+|||+|.
T Consensus        31 n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~---~~~~~~v~I~V~DvNDn~P~  107 (215)
T 2qvi_A           31 NLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQ---VENPIDIVINVIDMNDNRPE  107 (215)
T ss_dssp             TSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCC---CEEEEEEEEEEECCCCCCCB
T ss_pred             CceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECCCCc---eeeeEEEEEEEeECCCCCCc
Confidence            689999999764    35789999999999999999999999999999999998865   68899999999999999999


Q ss_pred             EccC-ceeEeeCCCCCCcEEEEEEEEeCCC--CCCceEEEEEEcCC-----CCCeeeeCcceEEEEc-eeCCccCCCeEE
Q psy13120         78 FITA-NETTIPENSPLNTVVAALKAIDRDE--GQNSYVEYSIINSE-----ATPFSLGPVDGLLRVA-QKLDREIKSNYT  148 (384)
Q Consensus        78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~--~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~-~~ld~e~~~~~~  148 (384)
                      |... |.+.|+|++++|+.++++.|+|+|.  +.|+.++|+|.++.     .+.|.|++.+|.|++. ++||||....|.
T Consensus       108 F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~  187 (215)
T 2qvi_A          108 FLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYT  187 (215)
T ss_dssp             CSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTCSEEE
T ss_pred             ccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccCCeEE
Confidence            9988 9999999999999999999999998  68999999999874     5789999999999995 799999999999


Q ss_pred             EEEEEEeCCCC---CCceeEEEEEEecc
Q psy13120        149 LEIKAKDRGEP---SKSSRTKFFIRLLD  173 (384)
Q Consensus       149 l~V~a~d~~~~---~~~~~~~v~I~V~d  173 (384)
                      |.|.|+|.|++   ++++.++|+|+|.|
T Consensus       188 l~V~a~D~g~~p~~~ls~t~~v~I~V~D  215 (215)
T 2qvi_A          188 LIIQATDMEGNPTYGLSNTATAVITVTD  215 (215)
T ss_dssp             EEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred             EEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence            99999999887   78999999999986

>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}

Probab=100.00  E-value=4.2e-33  Score=238.88  Aligned_cols=164  Identities=34%  Similarity=0.516  Sum_probs=152.5

Q ss_pred             EEEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccC-cee
Q psy13120          6 EYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITA-NET   84 (384)
Q Consensus         6 ~Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~-~~~   84 (384)
                      +|+|.++++.++|+|++.+|.|++++.||||....|.|+|+|+|.++++  ++++++.|.|.|.|+|||+|.|... |.+
T Consensus        34 ~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~--~~~~~~~v~I~V~DvNDn~P~F~~~~y~~  111 (203)
T 3ppe_A           34 MYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNR--SLEPPSKFIIKVSDINDNAPIFVQKIFNG  111 (203)
T ss_dssp             EEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTTE--ECSCCEEEEEEEECCCCCCCEESCSEEEE
T ss_pred             EEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCCCC--cccceEEEEEEEcCCCCCCCCccCCccEE
Confidence            9999988887899999999999999999999999999999999998752  2578899999999999999999988 999


Q ss_pred             EeeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCeeeeCcceEEEEc-eeCCccCCCeEEEEEEEEeC-CCC
Q psy13120         85 TIPENSPLNTVVAALKAIDRDE---GQNSYVEYSIINSEATPFSLGPVDGLLRVA-QKLDREIKSNYTLEIKAKDR-GEP  159 (384)
Q Consensus        85 ~v~E~~~~gt~v~~~~a~D~D~---~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~-~~ld~e~~~~~~l~V~a~d~-~~~  159 (384)
                      .|+|+.++|+.++++.|+|+|.   +.|+.++|+|.++. ..|.|+ .+|.|++. ++||||....|.|.|.|+|. |.|
T Consensus       112 ~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~-~~F~I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p  189 (203)
T 3ppe_A          112 SVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN-EYFTVD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLT  189 (203)
T ss_dssp             EEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST-TTEEEC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCC
T ss_pred             EEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC-CcEEEe-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCC
Confidence            9999999999999999999994   77889999999875 589999 89999999 99999999999999999998 677


Q ss_pred             CCceeEEEEEEecc
Q psy13120        160 SKSSRTKFFIRLLD  173 (384)
Q Consensus       160 ~~~~~~~v~I~V~d  173 (384)
                      +++++++|+|+|.|
T Consensus       190 ~~s~t~~v~I~V~D  203 (203)
T 3ppe_A          190 GESSTATVIIRLTD  203 (203)
T ss_dssp             CSSSEEEEEEEEEC
T ss_pred             CCeEEEEEEEEEEC
Confidence            89999999999986

>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A

Probab=100.00  E-value=3.6e-33  Score=242.42  Aligned_cols=168  Identities=29%  Similarity=0.432  Sum_probs=153.4

Q ss_pred             ccEEEEEEeC----CCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEE
Q psy13120          3 GRLEYSIVSG----DDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEF   78 (384)
Q Consensus         3 ~~i~Y~i~~~----~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f   78 (384)
                      ..++|+|.++    ++.++|.|++.+|.|++++.||||....|.|+|+|+|.++++   +++++.|.|.|.|+|||+|.|
T Consensus        32 ~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~---~~~~~~v~I~V~DvNDn~P~F  108 (218)
T 3k5r_A           32 EGSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKT---LEGPVPLEVIVIDQNDNRPIF  108 (218)
T ss_dssp             TTCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSSSCE---EEEEEEEEEEEECTTCCCCCC
T ss_pred             ceEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECCCCc---eeeeEEEEEEEEeCCCCCCcc
Confidence            3789999863    345899999999999999999999999999999999988764   689999999999999999999


Q ss_pred             ccC-ceeEeeCCCCCCcEEEEEEEEeCCC--CCCceEEEEEEcCCC-----CCeeeeCcceEEEEc---eeCCccC--CC
Q psy13120         79 ITA-NETTIPENSPLNTVVAALKAIDRDE--GQNSYVEYSIINSEA-----TPFSLGPVDGLLRVA---QKLDREI--KS  145 (384)
Q Consensus        79 ~~~-~~~~v~E~~~~gt~v~~~~a~D~D~--~~~~~~~y~l~~~~~-----~~F~i~~~~G~i~~~---~~ld~e~--~~  145 (384)
                      ... |.+.|+|++++|+.++++.|+|+|.  +.|+.++|+|.++..     ++|.|++.+|.|++.   +.||||.  ..
T Consensus       109 ~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~  188 (218)
T 3k5r_A          109 REGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENP  188 (218)
T ss_dssp             CSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGCSCS
T ss_pred             cCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCccccCCC
Confidence            887 9999999999999999999999998  678999999997643     679999999999987   6999999  67


Q ss_pred             eEEEEEEEEeCC--CCCCceeEEEEEEecc
Q psy13120        146 NYTLEIKAKDRG--EPSKSSRTKFFIRLLD  173 (384)
Q Consensus       146 ~~~l~V~a~d~~--~~~~~~~~~v~I~V~d  173 (384)
                      .|.|.|.|+|.|  .|+++++++|+|+|.|
T Consensus       189 ~y~l~V~a~D~gg~~p~~sst~~v~I~V~D  218 (218)
T 3k5r_A          189 KYELIIEAQDMAGLDVGLTGTATATIVIDD  218 (218)
T ss_dssp             EEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred             eEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence            999999999998  7889999999999986

>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}

Probab=100.00  E-value=6.5e-34  Score=244.97  Aligned_cols=169  Identities=33%  Similarity=0.520  Sum_probs=148.9

Q ss_pred             CccEEEEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccC
Q psy13120          2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITA   81 (384)
Q Consensus         2 ~~~i~Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~   81 (384)
                      |+.|+|+|.+++..++|+|++.+|.|++++.||||....|.|+|+|+|.++.+  ++++++.|.|.|.|+|||+|.|...
T Consensus        32 ~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~--~~~~~~~v~I~V~DvNDn~P~F~~~  109 (207)
T 3lnd_A           32 DGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTGR--PVEPESEFIIKIHDINDNEPIFTKD  109 (207)
T ss_dssp             STTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSCC--CCSCCCCCEEEEECCSCCCCEESCS
T ss_pred             CceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCCC--ccccEEEEEEEECccCCCCCccCCC
Confidence            56799999877666799999999999999999999999999999999987422  1578889999999999999999988


Q ss_pred             -ceeEeeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCeeeeCcceEEEEc-eeCCccCCCeEEEEEEEEeC
Q psy13120         82 -NETTIPENSPLNTVVAALKAIDRDE---GQNSYVEYSIINSEATPFSLGPVDGLLRVA-QKLDREIKSNYTLEIKAKDR  156 (384)
Q Consensus        82 -~~~~v~E~~~~gt~v~~~~a~D~D~---~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~-~~ld~e~~~~~~l~V~a~d~  156 (384)
                       |.+.|+|+.++|+.++++.|+|+|.   +.|+.++|+|.++. +.|.|++.+|.|++. ++||||....|.|+|.|+|+
T Consensus       110 ~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~-~~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~  188 (207)
T 3lnd_A          110 VYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ-PYFSVESETGIIKTALLNMDRENREQYQVVIQAKDM  188 (207)
T ss_dssp             EEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESG-GGEEECTTTCEEEECCSSCCC--CCEEEEEEEEESG
T ss_pred             ceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCC-CCEEEcCCCcEEEECcccCCcccCCEEEEEEEEEEC
Confidence             9999999999999999999999998   78889999999874 589999999999999 89999999999999999999


Q ss_pred             CCC--CCceeEEEEEEecc
Q psy13120        157 GEP--SKSSRTKFFIRLLD  173 (384)
Q Consensus       157 ~~~--~~~~~~~v~I~V~d  173 (384)
                      |+|  ++++.++|+|+|.|
T Consensus       189 g~~~~~~s~t~~v~I~V~D  207 (207)
T 3lnd_A          189 GGQMGGLSGTTTVNITLTD  207 (207)
T ss_dssp             GGCTTCBEEEEEEEEEEEC
T ss_pred             CCCCCCcEeEEEEEEEEeC
Confidence            876  78999999999986

>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*

Probab=99.98  E-value=2.4e-31  Score=233.13  Aligned_cols=199  Identities=29%  Similarity=0.379  Sum_probs=167.1

Q ss_pred             ceeEeeCCCCCCcEEEEEEE-EeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEc---eeCCccCCCeEEEEEEEE---
Q psy13120         82 NETTIPENSPLNTVVAALKA-IDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVA---QKLDREIKSNYTLEIKAK---  154 (384)
Q Consensus        82 ~~~~v~E~~~~gt~v~~~~a-~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~---~~ld~e~~~~~~l~V~a~---  154 (384)
                      +.++|+|+++.|+.+..+.+ .|.|.+.++.++|+|.+....+|.|++.+|.+.+.   +.||||....|.+.+.+.   
T Consensus        22 ~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~~~  101 (242)
T 4apx_B           22 TIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQCV  101 (242)
T ss_dssp             EEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEEEE
T ss_pred             EEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEEEeE
Confidence            56789999999999887544 44555778889999998877899999999999874   679999887665554444   


Q ss_pred             eCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEE-----EEEEeCCCCCCceEEEEEEeCCCC---
Q psy13120        155 DRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQ-----VSATDLDDGINGRVRYTIISGDDN---  226 (384)
Q Consensus       155 d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~-----v~a~D~D~~~~~~i~y~i~~~~~~---  226 (384)
                      +.. ......+.|+|.|.|+|||+|.|....|.+.|+|+.++|+.|.+     +.|+|+|.+.++.++|+|..++..   
T Consensus       102 ~~~-~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~  180 (242)
T 4apx_B          102 NKK-VGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPEDPTS  180 (242)
T ss_dssp             ETT-TCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTSTTH
T ss_pred             CCC-CCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCCccc
Confidence            433 23456778999999999999999999999999999999999976     789999999999999999976553   


Q ss_pred             -CCeEEEC-CCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120        227 -HDLTISE-DNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       227 -~~f~i~~-~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                       +.|.|+. .+|.|++.+.||||....|.|+|+|+|++.++.. .+++.+.|+|+|+-
T Consensus       181 ~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~-~~~~~~~vtVnVe~  237 (242)
T 4apx_B          181 NDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNE-RRTTTTTLTVDLEH  237 (242)
T ss_dssp             HHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGG-CCEEEEEEEEEEEC
T ss_pred             ccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchh-cccCCceEEEEEee
Confidence             3599985 5899999999999999999999999999887642 35778899998874

>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*

Probab=99.95  E-value=7.1e-28  Score=211.03  Aligned_cols=184  Identities=23%  Similarity=0.296  Sum_probs=148.1

Q ss_pred             ceEEEEecCCCCCcEEEEEEEEeC-CCCCCceEEEEEEeCCCCCCeEEECCCcEEEEc---ccCCccccCeEEEEEE---
Q psy13120        185 SYSASVPENISVGATVLQVSATDL-DDGINGRVRYTIISGDDNHDLTISEDNGLLRIA---KNLNYERKAQYSLTIQ---  257 (384)
Q Consensus       185 ~~~~~v~E~~~~g~~v~~v~a~D~-D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~---~~lD~e~~~~~~l~V~---  257 (384)
                      .+.+.|+|+++.|+.+..+.+.+. |.+.+..+.|+|. ++...+|.|++.+|.+.+.   +.||||....|.+.+.   
T Consensus        21 ~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~-~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~   99 (242)
T 4apx_B           21 ATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLK-DNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQ   99 (242)
T ss_dssp             SEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEE-SCGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEE
T ss_pred             eEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEe-cCCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEEE
Confidence            356889999999999887555544 4567888999997 5556789999999999874   6799999876655444   


Q ss_pred             EEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEE-----EEEecCCCCCCCceEEEEE
Q psy13120        258 AEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMT-----VQAHDADSLPFNGLVRYFL  332 (384)
Q Consensus       258 a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~-----v~a~D~D~~~~~~~i~y~l  332 (384)
                      +.+.....     ...+.|+|.|.|+|||+|+|.+..|.+.|.|+..+  |+.+++     +.|+|+|.+. |+.++|+|
T Consensus       100 ~~~~~~~~-----~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~--Gt~v~~~~~~~v~A~D~D~g~-N~~v~Ysi  171 (242)
T 4apx_B          100 CVNKKVGT-----VIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPV--GTTIFTGFSGDNGATDIDDGP-NGQIEYVI  171 (242)
T ss_dssp             EEETTTCC-----EEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCT--TCEEECTTTTTTSEECCSSGG-GGCEEEEE
T ss_pred             eECCCCCe-----EEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCC--CCEEEEeeecccccccCCCCc-CCceEEEE
Confidence            44443322     45678999999999999999999999999999954  888876     7899999988 99999999


Q ss_pred             ecCCCCCCCCcCCCCCCCceEEeC-CcceEEEcccCCcccccEEEEEEEEEcC
Q psy13120        333 KDSGASSGNSQTQGGTGDLFRVNS-TTGDIYLLKSLDREKQAEYLLTLQAMDS  384 (384)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~f~Id~-~tG~i~~~~~ld~e~~~~~~l~V~a~D~  384 (384)
                      .....       .+...+.|.||+ .+|.|++++.||||....|.|+|+|+|+
T Consensus       172 ~~~~~-------~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~  217 (242)
T 4apx_B          172 QYNPE-------DPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDR  217 (242)
T ss_dssp             ECCTT-------STTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEEC
T ss_pred             ecCCC-------CcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEEC
Confidence            86110       001125699995 5999999999999999999999999995

>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.94  E-value=8.2e-28  Score=187.94  Aligned_cols=114  Identities=32%  Similarity=0.496  Sum_probs=108.2

Q ss_pred             EEEEeecCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC---CCCeeeeCcceEEEEceeCCc
Q psy13120         66 IVIRDVNDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE---ATPFSLGPVDGLLRVAQKLDR  141 (384)
Q Consensus        66 I~V~dvNd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~---~~~F~i~~~~G~i~~~~~ld~  141 (384)
                      ++|.|+|||+|.|... |.+.|+|+.++|+.++++.|+|+|.|.|+.++|+|.++.   .++|.|++.+|.|+++++|||
T Consensus         2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~   81 (119)
T 2yst_A            2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR   81 (119)
T ss_dssp             CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred             CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence            5689999999999988 999999999999999999999999999999999999874   257999999999999999999


Q ss_pred             cCCCeEEEEEEEEeCCCCCCceeEEEEEEeccCCCCCC
Q psy13120        142 EIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNP  179 (384)
Q Consensus       142 e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P  179 (384)
                      |....|.|+|.|+|+|.|++++.++|+|.|.|+|||+|
T Consensus        82 E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P  119 (119)
T 2yst_A           82 EEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP  119 (119)
T ss_dssp             TTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred             ccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence            99999999999999999999999999999999999998

>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.94  E-value=4.7e-27  Score=183.62  Aligned_cols=116  Identities=34%  Similarity=0.526  Sum_probs=108.0

Q ss_pred             EEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCC--CCCeEEECCCcEEEEcccCCc
Q psy13120        169 IRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDD--NHDLTISEDNGLLRIAKNLNY  246 (384)
Q Consensus       169 I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~--~~~f~i~~~~G~l~~~~~lD~  246 (384)
                      ++|.|+|||+|.|....|.+.|.|+.++|+.|+++.|+|+|.+.++.++|+|.++..  ..+|.|++.+|.|++.++|||
T Consensus         2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~   81 (119)
T 2yst_A            2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR   81 (119)
T ss_dssp             CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred             CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence            468999999999999999999999999999999999999999989999999986543  358999999999999999999


Q ss_pred             cccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCC
Q psy13120        247 ERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYP  288 (384)
Q Consensus       247 e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P  288 (384)
                      |....|.|+|+|+|++.++.    +++++|+|+|.|+||++|
T Consensus        82 E~~~~y~l~V~A~D~g~p~~----s~~~~v~I~V~DvNDn~P  119 (119)
T 2yst_A           82 EEVNQLRFTVMARDRGQPPK----TDKATVVLNIKDENDNVP  119 (119)
T ss_dssp             TTCSEEEEEEEECCSBTTBC----CEEEEEEEEEECSTTCCC
T ss_pred             ccCCEEEEEEEEEECCCCCc----EEEEEEEEEEEeccCCCC
Confidence            99999999999999988764    789999999999999998

>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.91  E-value=2.4e-25  Score=172.23  Aligned_cols=108  Identities=32%  Similarity=0.426  Sum_probs=100.5

Q ss_pred             EEEEeecCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC----CCCCeeeeCcceEEEEceeCC
Q psy13120         66 IVIRDVNDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS----EATPFSLGPVDGLLRVAQKLD  140 (384)
Q Consensus        66 I~V~dvNd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~----~~~~F~i~~~~G~i~~~~~ld  140 (384)
                      |+|.|+|||+|.|... |.+.|+|++++|+.++++.|+|+|.+.|+.++|+|.+.    ..++|.|++.+|.|+++++||
T Consensus         2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD   81 (114)
T 2ee0_A            2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD   81 (114)
T ss_dssp             CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred             CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence            5789999999999988 99999999999999999999999999999999999863    346799999999999999999


Q ss_pred             ccCCCeEEEEEEEEeCCCCCCceeEEEEEEeccCC
Q psy13120        141 REIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDEN  175 (384)
Q Consensus       141 ~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvn  175 (384)
                      ||....|.|+|.|+|+|.|+  +.++|+|.|.|+|
T Consensus        82 ~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN  114 (114)
T 2ee0_A           82 REETAIHKVTVLASDGSSTP--ARATVTINVTDVN  114 (114)
T ss_dssp             TTTCSEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred             cccCcEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence            99999999999999998865  7899999999997

>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.91  E-value=6.2e-25  Score=169.91  Aligned_cols=110  Identities=32%  Similarity=0.489  Sum_probs=101.7

Q ss_pred             EEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeC---CCCCCeEEECCCcEEEEcccCC
Q psy13120        169 IRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISG---DDNHDLTISEDNGLLRIAKNLN  245 (384)
Q Consensus       169 I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~---~~~~~f~i~~~~G~l~~~~~lD  245 (384)
                      |+|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.+.++.++|+|.++   +...+|.|++.+|.|++.++||
T Consensus         2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD   81 (114)
T 2ee0_A            2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD   81 (114)
T ss_dssp             CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred             CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence            5689999999999999999999999999999999999999999999999999752   3456899999999999999999


Q ss_pred             ccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecC
Q psy13120        246 YERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDIN  284 (384)
Q Consensus       246 ~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvN  284 (384)
                      ||....|.|+|.|+|++.++      ++++|+|+|.|+|
T Consensus        82 ~E~~~~y~l~V~A~D~g~~~------~~~~v~I~V~DvN  114 (114)
T 2ee0_A           82 REETAIHKVTVLASDGSSTP------ARATVTINVTDVN  114 (114)
T ss_dssp             TTTCSEEEEEEEEESSSSSC------EEEEEEEEEECCC
T ss_pred             cccCcEEEEEEEEEECCCCc------eEEEEEEEEEECC
Confidence            99999999999999998763      5799999999997

>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=2.9e-22  Score=156.82  Aligned_cols=113  Identities=22%  Similarity=0.282  Sum_probs=103.2

Q ss_pred             CCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeC----CCCCCeEEECCCcEEEEcccCCccccC
Q psy13120        175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISG----DDNHDLTISEDNGLLRIAKNLNYERKA  250 (384)
Q Consensus       175 nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~f~i~~~~G~l~~~~~lD~e~~~  250 (384)
                      +.+.|.|....|.+.+.|+.++|+.|++|. +|+|.+.++.++|+|.++    +..+.|.|++.+|.|++.++||||...
T Consensus         6 ~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~   84 (123)
T 2yqg_A            6 SGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETP   84 (123)
T ss_dssp             SCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTBS
T ss_pred             cccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccCc
Confidence            567999999999999999999999999999 699988888999999976    345789999999999999999999999


Q ss_pred             eEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccC
Q psy13120        251 QYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLH  292 (384)
Q Consensus       251 ~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~  292 (384)
                      .|.|+|.|+|++.+..    ++++.|.|.|.|+|||+|+|.+
T Consensus        85 ~y~l~V~A~D~g~p~~----~~~~~v~I~V~DvNDn~P~F~~  122 (123)
T 2yqg_A           85 FFLLTGYALDARGNNV----EKPLELRIKVLDINDNEPVFTQ  122 (123)
T ss_dssp             EEEEEEEEECTTCCEE----EEEECCEEEEECTTCCCCCCCC
T ss_pred             eEEEEEEEEECCCCce----EEEEEEEEEEEEcCCCCCEeCC
Confidence            9999999999987754    7889999999999999999975

>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=1.4e-22  Score=158.73  Aligned_cols=111  Identities=24%  Similarity=0.278  Sum_probs=102.3

Q ss_pred             cCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC-----CCCCeeeeCcceEEEEceeCCccCCC
Q psy13120         72 NDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS-----EATPFSLGPVDGLLRVAQKLDREIKS  145 (384)
Q Consensus        72 Nd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~~~ld~e~~~  145 (384)
                      +.++|.|... +.+.+.|++++|+.|+++. +|+|.+.|+.++|+|.++     ..+.|.|++.+|.|+++++||||...
T Consensus         6 ~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~   84 (123)
T 2yqg_A            6 SGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETP   84 (123)
T ss_dssp             SCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTBS
T ss_pred             cccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccCc
Confidence            5789999887 8888888899999999999 699998888999999975     24689999999999999999999999


Q ss_pred             eEEEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceec
Q psy13120        146 NYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDS  183 (384)
Q Consensus       146 ~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~  183 (384)
                      .|.|+|.|+|.|.|++++.+.|.|.|.|+|||+|.|.+
T Consensus        85 ~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~  122 (123)
T 2yqg_A           85 FFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ  122 (123)
T ss_dssp             EEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred             eEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence            99999999999999899999999999999999999965

>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A

Probab=99.83  E-value=1.5e-20  Score=144.11  Aligned_cols=97  Identities=27%  Similarity=0.429  Sum_probs=79.5

Q ss_pred             ceeEeeCCCCCCcE--EEEEEEEeCCCCCCceEEEEEEcC-----CCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEE
Q psy13120         82 NETTIPENSPLNTV--VAALKAIDRDEGQNSYVEYSIINS-----EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAK  154 (384)
Q Consensus        82 ~~~~v~E~~~~gt~--v~~~~a~D~D~~~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~  154 (384)
                      +.++|+|++++|+.  ++++   |.|.+.|+.++|+|.++     ..+.|.|++.+|.|+++++||||....|.|+|.|+
T Consensus         7 ~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~   83 (110)
T 1ncg_A            7 PPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAV   83 (110)
T ss_dssp             CCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred             eeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEE
Confidence            67899999999995  5554   67777899999999974     35789999999999999999999999999999999


Q ss_pred             eCCCCCCceeEEEEEEeccCCCCCCce
Q psy13120        155 DRGEPSKSSRTKFFIRLLDENDNNPIF  181 (384)
Q Consensus       155 d~~~~~~~~~~~v~I~V~dvnd~~P~f  181 (384)
                      |.|.|++++.+.+.|.|.|+|||+|.|
T Consensus        84 D~g~p~~~~~~~v~I~V~DvNDn~P~F  110 (110)
T 1ncg_A           84 DINGNQVENPIDIVINVIDMNDNRPEF  110 (110)
T ss_dssp             CTTSCBCSCCEEEEEEEC---------
T ss_pred             ECCCCceeeEEEEEEEEEECCCCCCCC
Confidence            999999999999999999999999987

>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A

Probab=99.81  E-value=4.8e-20  Score=141.31  Aligned_cols=98  Identities=26%  Similarity=0.333  Sum_probs=77.8

Q ss_pred             eEEEEecCCCCCcE--EEEEEEEeCCCCCCceEEEEEEeC----CCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEE
Q psy13120        186 YSASVPENISVGAT--VLQVSATDLDDGINGRVRYTIISG----DDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAE  259 (384)
Q Consensus       186 ~~~~v~E~~~~g~~--v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~  259 (384)
                      |.++|+||.++|+.  |+++   |.|.+.++.++|+|.++    +..+.|.|++.+|.|++.++||||....|.|+|.|+
T Consensus         7 ~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~   83 (110)
T 1ncg_A            7 PPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAV   83 (110)
T ss_dssp             CCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred             eeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEE
Confidence            46899999999994  5555   66766788999999863    456789999999999999999999999999999999


Q ss_pred             ECCCCCcceeeeeEEEEEEEEeecCCCCCcc
Q psy13120        260 DCGGDTEERIRFDTATVSILVSDINDNYPVF  290 (384)
Q Consensus       260 D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f  290 (384)
                      |++.++.    ++++.|.|+|.|+|||+|+|
T Consensus        84 D~g~p~~----~~~~~v~I~V~DvNDn~P~F  110 (110)
T 1ncg_A           84 DINGNQV----ENPIDIVINVIDMNDNRPEF  110 (110)
T ss_dssp             CTTSCBC----SCCEEEEEEEC---------
T ss_pred             ECCCCce----eeEEEEEEEEEECCCCCCCC
Confidence            9988764    78899999999999999997

>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}

Probab=99.77  E-value=7.9e-20  Score=142.99  Aligned_cols=106  Identities=22%  Similarity=0.233  Sum_probs=91.6

Q ss_pred             cceEEEEecCCCCCcEEEEEEEEeCCCCCCceE---EEEEEeCCCCCCeEEECCCcEEEEcccCCcccc----CeEEEEE
Q psy13120        184 KSYSASVPENISVGATVLQVSATDLDDGINGRV---RYTIISGDDNHDLTISEDNGLLRIAKNLNYERK----AQYSLTI  256 (384)
Q Consensus       184 ~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i---~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~----~~~~l~V  256 (384)
                      ..+.++|+|+.++|+.|+++ |+|.|.+. ..+   +|+|.+++..+.|.|++.+|.|++.++||||..    ..|.|+|
T Consensus        11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v   88 (125)
T 1wyj_A           11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHF   88 (125)
T ss_dssp             CCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCC
T ss_pred             ceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEE
Confidence            44568999999999999999 99988653 334   899998777889999999999999999999999    9999999


Q ss_pred             EEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEE
Q psy13120        257 QAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLAL  298 (384)
Q Consensus       257 ~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~  298 (384)
                      .|.+.. +      ...++|.|.|.|+|||+|+|.+..|.++
T Consensus        89 ~a~~~~-p------~~~~~V~I~V~DvNDN~P~F~~~~y~vs  123 (125)
T 1wyj_A           89 QVLLKS-P------VQFIQGEIQLQDVNDHAPEFMEDESGPS  123 (125)
T ss_dssp             EEEETT-T------TEEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred             EEEECC-C------CeEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence            999743 2      2478999999999999999999888654

>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}

Probab=99.75  E-value=5.7e-18  Score=126.60  Aligned_cols=90  Identities=29%  Similarity=0.435  Sum_probs=82.7

Q ss_pred             ceeEeeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcCCC-CCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCC-
Q psy13120         82 NETTIPENSP--LNTVVAALKAIDRDEGQNSYVEYSIINSEA-TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRG-  157 (384)
Q Consensus        82 ~~~~v~E~~~--~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~-~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~-  157 (384)
                      ..+.|+||.+  .|+.++++. +|+|.| |+.++|+|.++.. +.|.|++.+|.|++.++||||....|.|+|.|+|.| 
T Consensus         6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~   83 (99)
T 1zvn_A            6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRT   83 (99)
T ss_dssp             CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred             cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCC
Confidence            4678999976  689999999 999999 9999999988643 689999999999999999999999999999999999 


Q ss_pred             CCCCceeEEEEEEecc
Q psy13120        158 EPSKSSRTKFFIRLLD  173 (384)
Q Consensus       158 ~~~~~~~~~v~I~V~d  173 (384)
                      +|++++.+.|.|.|.|
T Consensus        84 ~p~l~~~~~v~I~V~D   99 (99)
T 1zvn_A           84 GRPMEPESEFIIKIQD   99 (99)
T ss_dssp             CCBSSCCEEEEEEEEC
T ss_pred             CCCcceeEEEEEEEeC
Confidence            5889999999999976

>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A

Probab=99.74  E-value=1e-17  Score=125.06  Aligned_cols=90  Identities=27%  Similarity=0.416  Sum_probs=80.6

Q ss_pred             ceeEeeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCC
Q psy13120         82 NETTIPENSP--LNTVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE  158 (384)
Q Consensus        82 ~~~~v~E~~~--~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~  158 (384)
                      +.++|+||.+  .|+.++++. +|+|.| |+.++|+|.+.. .+.|.|++.+|.|++.++||||....|.|+|.|+|+|.
T Consensus         5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~   82 (98)
T 1zxk_A            5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET   82 (98)
T ss_dssp             CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred             ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCC
Confidence            5688999985  899999997 999999 999999999874 35799999999999999999999999999999999987


Q ss_pred             -CCCceeEEEEEEecc
Q psy13120        159 -PSKSSRTKFFIRLLD  173 (384)
Q Consensus       159 -~~~~~~~~v~I~V~d  173 (384)
                       |++++.+.|.|.|.|
T Consensus        83 ~~~l~~~~~v~I~V~D   98 (98)
T 1zxk_A           83 NKPLEPPSEFIIKVQD   98 (98)
T ss_dssp             CCBSSCCEEEEEEECC
T ss_pred             CCCcceeEEEEEEEEC
Confidence             789999999999986

>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}

Probab=99.73  E-value=3.4e-17  Score=122.34  Aligned_cols=91  Identities=24%  Similarity=0.332  Sum_probs=81.8

Q ss_pred             eEEEEecCCC--CCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECC-
Q psy13120        186 YSASVPENIS--VGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCG-  262 (384)
Q Consensus       186 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~-  262 (384)
                      +.+.|+||.+  .|+.|+++. +|+|.+ |+.++|+|.++...+.|.|++.+|.|++.++||||....|.|+|.|+|.+ 
T Consensus         6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~   83 (99)
T 1zvn_A            6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRT   83 (99)
T ss_dssp             CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred             cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCC
Confidence            3588999976  689999999 999999 99999999876666789999999999999999999999999999999998 


Q ss_pred             CCCcceeeeeEEEEEEEEee
Q psy13120        263 GDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       263 ~~~~~~~~~~~~~v~i~V~d  282 (384)
                      +++.    ++.+.|.|+|.|
T Consensus        84 ~p~l----~~~~~v~I~V~D   99 (99)
T 1zvn_A           84 GRPM----EPESEFIIKIQD   99 (99)
T ss_dssp             CCBS----SCCEEEEEEEEC
T ss_pred             CCCc----ceeEEEEEEEeC
Confidence            4664    778999999986

>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}

Probab=99.72  E-value=7.5e-19  Score=137.44  Aligned_cols=103  Identities=22%  Similarity=0.203  Sum_probs=88.8

Q ss_pred             ceeEeeCCCCCCcEEEEEEEEeCCCCCCceE---EEEEEcC-CCCCeeeeCcceEEEEceeCCccCC----CeEEEEEEE
Q psy13120         82 NETTIPENSPLNTVVAALKAIDRDEGQNSYV---EYSIINS-EATPFSLGPVDGLLRVAQKLDREIK----SNYTLEIKA  153 (384)
Q Consensus        82 ~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~---~y~l~~~-~~~~F~i~~~~G~i~~~~~ld~e~~----~~~~l~V~a  153 (384)
                      +.++|+|+.++|+.|+++ |+|.|.+. +.+   +|+|.++ ..++|.|++.+|.|+++++||||..    ..|.|.|.|
T Consensus        13 ~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v~a   90 (125)
T 1wyj_A           13 ITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQV   90 (125)
T ss_dssp             CCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCCEE
T ss_pred             EEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEEEE
Confidence            678999999999999999 88888754 234   8999865 4578999999999999999999999    999999999


Q ss_pred             EeCCCCCCceeEEEEEEeccCCCCCCceeccceEEE
Q psy13120        154 KDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSAS  189 (384)
Q Consensus       154 ~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~  189 (384)
                      .+..  +. ..+.|.|.|.|+|||+|.|....|.++
T Consensus        91 ~~~~--p~-~~~~V~I~V~DvNDN~P~F~~~~y~vs  123 (125)
T 1wyj_A           91 LLKS--PV-QFIQGEIQLQDVNDHAPEFMEDESGPS  123 (125)
T ss_dssp             EETT--TT-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred             EECC--CC-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence            9843  33 578999999999999999999887654

>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A

Probab=99.72  E-value=4.6e-17  Score=121.48  Aligned_cols=91  Identities=29%  Similarity=0.325  Sum_probs=79.6

Q ss_pred             eEEEEecCCC--CCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCC
Q psy13120        186 YSASVPENIS--VGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGG  263 (384)
Q Consensus       186 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~  263 (384)
                      +.++|+||.+  .|+.|+++. +|+|.+ |+.++|+|.++...+.|.|++.+|.|++.++||||....|.|+|.|+|++.
T Consensus         5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~   82 (98)
T 1zxk_A            5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET   82 (98)
T ss_dssp             CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred             ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCC
Confidence            4688999995  899999997 999999 999999998665667899999999999999999999999999999999986


Q ss_pred             -CCcceeeeeEEEEEEEEee
Q psy13120        264 -DTEERIRFDTATVSILVSD  282 (384)
Q Consensus       264 -~~~~~~~~~~~~v~i~V~d  282 (384)
                       ++.    ++.++|.|.|.|
T Consensus        83 ~~~l----~~~~~v~I~V~D   98 (98)
T 1zxk_A           83 NKPL----EPPSEFIIKVQD   98 (98)
T ss_dssp             CCBS----SCCEEEEEEECC
T ss_pred             CCCc----ceeEEEEEEEEC
Confidence             544    778999999976

>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A

Probab=99.70  E-value=4.6e-17  Score=121.96  Aligned_cols=88  Identities=22%  Similarity=0.340  Sum_probs=80.8

Q ss_pred             ceeEeeCCCCC--CcEEEEEEEEeCCCCCCceEEEEEEcC-----CCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEE
Q psy13120         82 NETTIPENSPL--NTVVAALKAIDRDEGQNSYVEYSIINS-----EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAK  154 (384)
Q Consensus        82 ~~~~v~E~~~~--gt~v~~~~a~D~D~~~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~  154 (384)
                      ..+.|+||.++  |+.++++.|+|+|.    .++|+|.+.     ..+.|.|++.+|.|++.++||||....|.|+|.|+
T Consensus         5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~   80 (99)
T 3k6d_A            5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETT   80 (99)
T ss_dssp             CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred             CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEE
Confidence            46899999999  99999999999996    589999863     24689999999999999999999999999999999


Q ss_pred             eCCCCCCceeEEEEEEecc
Q psy13120        155 DRGEPSKSSRTKFFIRLLD  173 (384)
Q Consensus       155 d~~~~~~~~~~~v~I~V~d  173 (384)
                      |+|+|++++.+.++|.|.|
T Consensus        81 D~g~~~l~~~~~v~I~V~D   99 (99)
T 3k6d_A           81 DENGKTIEGPVDLEILVID   99 (99)
T ss_dssp             CTTCCEEEEEEEEEEEEEC
T ss_pred             ECCCCceeeEEEEEEEEEC
Confidence            9999999999999999986

>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B

Probab=99.69  E-value=6.4e-17  Score=122.50  Aligned_cols=89  Identities=25%  Similarity=0.355  Sum_probs=79.7

Q ss_pred             eeEeeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcCC-----CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEe
Q psy13120         83 ETTIPENSP--LNTVVAALKAIDRDEGQNSYVEYSIINSE-----ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKD  155 (384)
Q Consensus        83 ~~~v~E~~~--~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d  155 (384)
                      .++|+||.+  .|+.++++.| |  .+.|+.++|+|.++.     .+.|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus        10 ~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D   86 (105)
T 2omz_B           10 PISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS   86 (105)
T ss_dssp             CCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred             CEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence            578999998  5889999999 3  356899999999864     35899999999999999999999999999999999


Q ss_pred             CCCCCCceeEEEEEEeccC
Q psy13120        156 RGEPSKSSRTKFFIRLLDE  174 (384)
Q Consensus       156 ~~~~~~~~~~~v~I~V~dv  174 (384)
                      +|+|++++.+.|.|.|.|+
T Consensus        87 ~g~p~~~~~~~v~I~V~Dv  105 (105)
T 2omz_B           87 SNGNAVEDPMEILITVTDQ  105 (105)
T ss_dssp             TTSCBSSCCEEEEEEEEC-
T ss_pred             CCCCceeeEEEEEEEEEeC
Confidence            9999999999999999985

>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}

Probab=99.69  E-value=9.8e-17  Score=120.40  Aligned_cols=88  Identities=22%  Similarity=0.326  Sum_probs=80.4

Q ss_pred             ceeEeeCCCCC--CcEEEEEEEEeCCCCCCceEEEEEEcC-----CCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEE
Q psy13120         82 NETTIPENSPL--NTVVAALKAIDRDEGQNSYVEYSIINS-----EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAK  154 (384)
Q Consensus        82 ~~~~v~E~~~~--gt~v~~~~a~D~D~~~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~  154 (384)
                      ..+.|+||.+.  |+.++++.|+|+|.    .++|+|.+.     ..+.|.|++.+|.|++.++||||....|.|+|.|+
T Consensus         6 ~~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~   81 (100)
T 3k6f_A            6 SPILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETT   81 (100)
T ss_dssp             CCEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred             CcEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEE
Confidence            46899999998  89999999999996    489999864     24689999999999999999999999999999999


Q ss_pred             eCCCCCCceeEEEEEEecc
Q psy13120        155 DRGEPSKSSRTKFFIRLLD  173 (384)
Q Consensus       155 d~~~~~~~~~~~v~I~V~d  173 (384)
                      |+|+|++++.++++|.|.|
T Consensus        82 D~g~p~l~~~~~v~I~V~D  100 (100)
T 3k6f_A           82 DASGKTLEGPVPLEVIVID  100 (100)
T ss_dssp             CTTCCEEEEEEEEEEEEEC
T ss_pred             ECCCCcccceEEEEEEEEC
Confidence            9999999999999999986

>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}

Probab=99.69  E-value=1.4e-16  Score=119.35  Aligned_cols=87  Identities=23%  Similarity=0.341  Sum_probs=80.0

Q ss_pred             eeEeeCCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcC-----CCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEe
Q psy13120         83 ETTIPENSPLN--TVVAALKAIDRDEGQNSYVEYSIINS-----EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKD  155 (384)
Q Consensus        83 ~~~v~E~~~~g--t~v~~~~a~D~D~~~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d  155 (384)
                      .+.|+||.+.|  +.++++.|+|+|.    .++|+|.+.     ..+.|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus         6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D   81 (99)
T 3k6i_A            6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTD   81 (99)
T ss_dssp             CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred             cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEE
Confidence            67899999987  8999999999996    599999864     236899999999999999999999999999999999


Q ss_pred             CCCCCCceeEEEEEEecc
Q psy13120        156 RGEPSKSSRTKFFIRLLD  173 (384)
Q Consensus       156 ~~~~~~~~~~~v~I~V~d  173 (384)
                      +|+|++++.+++.|.|.|
T Consensus        82 ~g~~~l~~~~~v~I~V~D   99 (99)
T 3k6i_A           82 LSGKIIDGPVRLDISVID   99 (99)
T ss_dssp             TTSCEEEEEEEEEEEEEC
T ss_pred             CCCCceeeeEEEEEEEEC
Confidence            999999999999999986

>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A

Probab=99.68  E-value=1.4e-16  Score=119.27  Aligned_cols=88  Identities=26%  Similarity=0.351  Sum_probs=79.2

Q ss_pred             EEEEecCCCC--CcEEEEEEEEeCCCCCCceEEEEEEe----CCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEE
Q psy13120        187 SASVPENISV--GATVLQVSATDLDDGINGRVRYTIIS----GDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAED  260 (384)
Q Consensus       187 ~~~v~E~~~~--g~~v~~v~a~D~D~~~~~~i~y~i~~----~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D  260 (384)
                      .+.|+||.++  |+.|++|.|+|+|.    .++|+|.+    ++..+.|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus         6 ~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D   81 (99)
T 3k6d_A            6 SISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTD   81 (99)
T ss_dssp             CEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred             cEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEE
Confidence            4789999999  99999999999995    69999974    34467899999999999999999999999999999999


Q ss_pred             CCCCCcceeeeeEEEEEEEEee
Q psy13120        261 CGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       261 ~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      +++++.    ++.++|+|.|.|
T Consensus        82 ~g~~~l----~~~~~v~I~V~D   99 (99)
T 3k6d_A           82 ENGKTI----EGPVDLEILVID   99 (99)
T ss_dssp             TTCCEE----EEEEEEEEEEEC
T ss_pred             CCCCce----eeEEEEEEEEEC
Confidence            988764    778999999986

>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}

Probab=99.66  E-value=6.1e-16  Score=116.07  Aligned_cols=88  Identities=23%  Similarity=0.386  Sum_probs=78.7

Q ss_pred             EEEEecCCCC--CcEEEEEEEEeCCCCCCceEEEEEEeC----CCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEE
Q psy13120        187 SASVPENISV--GATVLQVSATDLDDGINGRVRYTIISG----DDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAED  260 (384)
Q Consensus       187 ~~~v~E~~~~--g~~v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D  260 (384)
                      .+.|+||.+.  |+.|++|.|+|+|.    .++|+|.+.    +..+.|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus         7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D   82 (100)
T 3k6f_A            7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD   82 (100)
T ss_dssp             CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred             cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEE
Confidence            4789999998  89999999999996    599999853    3457899999999999999999999999999999999


Q ss_pred             CCCCCcceeeeeEEEEEEEEee
Q psy13120        261 CGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       261 ~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      .++++.    ++.++|.|.|.|
T Consensus        83 ~g~p~l----~~~~~v~I~V~D  100 (100)
T 3k6f_A           83 ASGKTL----EGPVPLEVIVID  100 (100)
T ss_dssp             TTCCEE----EEEEEEEEEEEC
T ss_pred             CCCCcc----cceEEEEEEEEC
Confidence            988764    788999999986

>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}

Probab=99.66  E-value=8.5e-16  Score=115.10  Aligned_cols=87  Identities=22%  Similarity=0.296  Sum_probs=78.0

Q ss_pred             EEEecCCCCC--cEEEEEEEEeCCCCCCceEEEEEEeC----CCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEEC
Q psy13120        188 ASVPENISVG--ATVLQVSATDLDDGINGRVRYTIISG----DDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDC  261 (384)
Q Consensus       188 ~~v~E~~~~g--~~v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~  261 (384)
                      +.|+||.+.|  +.|++|.|+|+|.    .++|+|.+.    +..+.|.|++.+|.|++.++||||....|.|+|.|+|.
T Consensus         7 ~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~   82 (99)
T 3k6i_A            7 ILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDL   82 (99)
T ss_dssp             EEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEET
T ss_pred             EEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEEC
Confidence            7899999986  8999999999995    799999852    34578999999999999999999999999999999999


Q ss_pred             CCCCcceeeeeEEEEEEEEee
Q psy13120        262 GGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       262 ~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      ++++.    ++.++|.|.|.|
T Consensus        83 g~~~l----~~~~~v~I~V~D   99 (99)
T 3k6i_A           83 SGKII----DGPVRLDISVID   99 (99)
T ss_dssp             TSCEE----EEEEEEEEEEEC
T ss_pred             CCCce----eeeEEEEEEEEC
Confidence            88764    788999999986

>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B

Probab=99.64  E-value=7.5e-16  Score=116.60  Aligned_cols=90  Identities=27%  Similarity=0.398  Sum_probs=78.0

Q ss_pred             EEEEecCCC--CCcEEEEEEEEeCCCCCCceEEEEEEeCCC----CCCeEEECCCcEEEEcccCCccccCeEEEEEEEEE
Q psy13120        187 SASVPENIS--VGATVLQVSATDLDDGINGRVRYTIISGDD----NHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAED  260 (384)
Q Consensus       187 ~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~----~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D  260 (384)
                      .+.|+||.+  .|+.|+++.| |.  +.|+.++|+|.+++.    .+.|.|++.+|.|++.++||||....|+|+|+|+|
T Consensus        10 ~~~V~En~~~~~~~~v~~v~A-d~--g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D   86 (105)
T 2omz_B           10 PISCPENEKGPFPKNLVQIKS-NK--DKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS   86 (105)
T ss_dssp             CCCEESSCCSSSSEEEEECEE-GG--GGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred             CEEEeCCCCCCCCcEEEEEEC-CC--CCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence            367999998  5889999999 33  458899999987653    46899999999999999999999999999999999


Q ss_pred             CCCCCcceeeeeEEEEEEEEeec
Q psy13120        261 CGGDTEERIRFDTATVSILVSDI  283 (384)
Q Consensus       261 ~~~~~~~~~~~~~~~v~i~V~dv  283 (384)
                      ++.++.    ++.++|.|.|.|+
T Consensus        87 ~g~p~~----~~~~~v~I~V~Dv  105 (105)
T 2omz_B           87 SNGNAV----EDPMEILITVTDQ  105 (105)
T ss_dssp             TTSCBS----SCCEEEEEEEEC-
T ss_pred             CCCCce----eeEEEEEEEEEeC
Confidence            998775    7789999999986

>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}

Probab=99.42  E-value=2.8e-14  Score=107.47  Aligned_cols=93  Identities=25%  Similarity=0.317  Sum_probs=74.9

Q ss_pred             cceEEEEecCCCCCcEEEEEEEEeCCCCCC--ceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccC------eEEEE
Q psy13120        184 KSYSASVPENISVGATVLQVSATDLDDGIN--GRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKA------QYSLT  255 (384)
Q Consensus       184 ~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~--~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~------~~~l~  255 (384)
                      ..+.++|+|+.++|+.|++| |.|.|...+  ..+.|+|.+++..++|.|++.+|.|++.+.||||...      .|.+.
T Consensus         3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~   81 (103)
T 1wuz_A            3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLE   81 (103)
T ss_dssp             CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEE
T ss_pred             eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEE
Confidence            34678999999999999999 999885321  2578999877788899999999999999999999852      45555


Q ss_pred             EEEEECCCCCcceeeeeEEEEEEEEeecCCC
Q psy13120        256 IQAEDCGGDTEERIRFDTATVSILVSDINDN  286 (384)
Q Consensus       256 V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~  286 (384)
                      |.+  . .+      ...+.|.|.|.|+|||
T Consensus        82 v~~--~-~p------~~~~~v~I~V~DiNDN  103 (103)
T 1wuz_A           82 VIV--D-RP------LQVFHVEVEVRDINDN  103 (103)
T ss_dssp             EEE--T-TT------TEEEEEEEEEECCSCC
T ss_pred             EEE--C-CC------CEEEEEEEEEEEcCCC
Confidence            554  2 22      2378999999999996

>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}

Probab=99.34  E-value=1e-13  Score=104.35  Aligned_cols=92  Identities=20%  Similarity=0.250  Sum_probs=71.8

Q ss_pred             ceeEeeCCCCCCcEEEEEEEEeCCCCCC--ceEEEEEEcC-CCCCeeeeCcceEEEEceeCCccCC----CeEEEEEEEE
Q psy13120         82 NETTIPENSPLNTVVAALKAIDRDEGQN--SYVEYSIINS-EATPFSLGPVDGLLRVAQKLDREIK----SNYTLEIKAK  154 (384)
Q Consensus        82 ~~~~v~E~~~~gt~v~~~~a~D~D~~~~--~~~~y~l~~~-~~~~F~i~~~~G~i~~~~~ld~e~~----~~~~l~V~a~  154 (384)
                      +.++|+|+.++|+.|+++ |.|.|.+.+  ..+.|+|.++ ..++|.|++.+|.|+++++||||..    ..|.+.+.|.
T Consensus         5 ~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~v~   83 (103)
T 1wuz_A            5 IHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVI   83 (103)
T ss_dssp             EEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEEEE
T ss_pred             EEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEEEE
Confidence            567899999999999999 999886422  2478999765 4678999999999999999999975    2334444444


Q ss_pred             eCCCCCCceeEEEEEEeccCCCC
Q psy13120        155 DRGEPSKSSRTKFFIRLLDENDN  177 (384)
Q Consensus       155 d~~~~~~~~~~~v~I~V~dvnd~  177 (384)
                      .. .| . ..+.|.|.|.|+|||
T Consensus        84 ~~-~p-~-~~~~v~I~V~DiNDN  103 (103)
T 1wuz_A           84 VD-RP-L-QVFHVEVEVRDINDN  103 (103)
T ss_dssp             ET-TT-T-EEEEEEEEEECCSCC
T ss_pred             EC-CC-C-EEEEEEEEEEEcCCC
Confidence            43 22 3 478999999999997

>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A

Probab=96.32  E-value=0.12  Score=42.60  Aligned_cols=117  Identities=16%  Similarity=0.146  Sum_probs=63.5

Q ss_pred             CCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccCceeEeeCCCC---CC-cEEEEEEEEeCCCCCCceE
Q psy13120         37 TKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITANETTIPENSP---LN-TVVAALKAIDRDEGQNSYV  112 (384)
Q Consensus        37 ~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~v~E~~~---~g-t~v~~~~a~D~D~~~~~~~  112 (384)
                      ....|+|+++|+|..|.    .+....+.|+|.+  ..+|...    +..+.+..   .| ..-....|.|.|. .-..+
T Consensus        59 ~~G~htlta~A~D~aGn----~s~s~~v~vtV~~--~~~Ptv~----itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~V  127 (190)
T 3pdd_A           59 AVGAYNLKAVAVLSDGR----RIESPVTPVLVKV--IVKPTVK----LTAPKSNVVAYGNEFLKITATASDSDG-KISRV  127 (190)
T ss_dssp             CSEEEEEEEEEEETTSC----EEECCCEEEEEEC--CCCCEEE----EEECCTTCCCBTTSEEEEEEEEECSSS-CEEEE
T ss_pred             CCccEEEEEEEEECCCC----EeeecceeEEecc--CCCCcee----ecCCCCCcEEecCCeEEEEEEEECCCC-cEEEE
Confidence            46789999999999874    2333457777776  4488653    22222211   23 4445677777653 12334


Q ss_pred             EEEEEcCCCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCCCCCceeEEEEEEec
Q psy13120        113 EYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLL  172 (384)
Q Consensus       113 ~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~  172 (384)
                      .|.+.+.   ...-+. ++-.......   ....|.|+++|+|..+- .+....+.|+|.
T Consensus       128 e~~~dg~---~v~t~t-~~~y~~~~~~---~~G~~tl~a~A~D~aGn-~s~s~~vtvtv~  179 (190)
T 3pdd_A          128 DFLVDGE---VIGSDR-EAPYEYEWKA---VEGNHEISVIAYDDDDA-ASTPDSVKIFVK  179 (190)
T ss_dssp             EEEETTE---EEEEEC-SSSEEEEEEC---CSEEEEEEEEEEETTCC-BCCCEEEEEEEB
T ss_pred             EEEECCE---EEeccc-CCCEEEEEec---CCeeEEEEEEEEECCCC-EEecceEEEEEC
Confidence            4444221   111111 1111111111   45789999999997552 234556666665

>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A

Probab=96.04  E-value=0.31  Score=40.11  Aligned_cols=118  Identities=14%  Similarity=0.104  Sum_probs=64.7

Q ss_pred             CCCeEEEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCC---CC-cEEEEEEEEeCCCCCCceEEE
Q psy13120        143 IKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENIS---VG-ATVLQVSATDLDDGINGRVRY  218 (384)
Q Consensus       143 ~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~---~g-~~v~~v~a~D~D~~~~~~i~y  218 (384)
                      ....|.|+++|+|..+- .+....+.|.|.+  ..+|...     +..+.+..   .| ..-....|.|.+.. -.++.|
T Consensus        59 ~~G~htlta~A~D~aGn-~s~s~~v~vtV~~--~~~Ptv~-----itsP~~g~~~~~~~~vtl~~~AsD~~g~-V~~Ve~  129 (190)
T 3pdd_A           59 AVGAYNLKAVAVLSDGR-RIESPVTPVLVKV--IVKPTVK-----LTAPKSNVVAYGNEFLKITATASDSDGK-ISRVDF  129 (190)
T ss_dssp             CSEEEEEEEEEEETTSC-EEECCCEEEEEEC--CCCCEEE-----EEECCTTCCCBTTSEEEEEEEEECSSSC-EEEEEE
T ss_pred             CCccEEEEEEEEECCCC-EeeecceeEEecc--CCCCcee-----ecCCCCCcEEecCCeEEEEEEEECCCCc-EEEEEE
Confidence            35789999999997652 2222346666665  3477642     33333322   23 44566777776521 123444


Q ss_pred             EEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120        219 TIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       219 ~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      .+. |   ....-+. ++-.......   ....|.|+++|+|..+..     +.+..|+|+|.+
T Consensus       130 ~~d-g---~~v~t~t-~~~y~~~~~~---~~G~~tl~a~A~D~aGn~-----s~s~~vtvtv~~  180 (190)
T 3pdd_A          130 LVD-G---EVIGSDR-EAPYEYEWKA---VEGNHEISVIAYDDDDAA-----STPDSVKIFVKQ  180 (190)
T ss_dssp             EET-T---EEEEEEC-SSSEEEEEEC---CSEEEEEEEEEEETTCCB-----CCCEEEEEEEBC
T ss_pred             EEC-C---EEEeccc-CCCEEEEEec---CCeeEEEEEEEEECCCCE-----EecceEEEEECC
Confidence            442 1   1111111 1111111111   467999999999998875     456778888764

>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A

Probab=94.89  E-value=1.9  Score=38.11  Aligned_cols=144  Identities=16%  Similarity=0.170  Sum_probs=75.3

Q ss_pred             CCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCC--CeEEECCCcEEEEccc---------
Q psy13120        175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNH--DLTISEDNGLLRIAKN---------  243 (384)
Q Consensus       175 nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~--~f~i~~~~G~l~~~~~---------  243 (384)
                      +|+++.|....-...|.|+.  |+...+|.-.- +......+.|....|....  -|.  +..|.|.....         
T Consensus         6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~--~~~gtl~F~~Get~kti~V~   80 (298)
T 3rb5_A            6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIE   80 (298)
T ss_dssp             -----CEEESSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBC--CCEEEEEECTTCCEECCEEC
T ss_pred             CCCceEEEEeCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCcc--ccceEEEECCCceEEEEEEE
Confidence            35566666666667899986  44444443332 3334556888877664422  232  23455444221         


Q ss_pred             -C-CccccCeEEEEEEEEECC-CCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEEecCC
Q psy13120        244 -L-NYERKAQYSLTIQAEDCG-GDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDAD  320 (384)
Q Consensus       244 -l-D~e~~~~~~l~V~a~D~~-~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D~D  320 (384)
                       + |-.....-+|.|..++.. +...    ......+|+|.| ||++|.|.-..-...|.|+.    |...++|.-...-
T Consensus        81 I~dD~~~E~dEtF~v~Ls~p~~~a~l----g~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~----g~~~~~V~Rs~~~  151 (298)
T 3rb5_A           81 VIDDDVFEEDECFYIRLFNPSEGVKL----AVPMIATVMILD-DDHAGIFAFTDSVFEITESV----GRFELKVMRYSGA  151 (298)
T ss_dssp             BCCCSSCCCCEEEEEEEECCCTTCCB----CSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC----CCEEEEEEEESCC
T ss_pred             EeCCCCccCcEEEEEEEeCCCCCcEE----CCCceEEEEEec-cccccccccccccEEeecCC----ceEEEEEEEEecC
Confidence             2 211223345555666542 2221    222345555566 46689877655577899986    5566666665543


Q ss_pred             CCCCCceEEEEEec
Q psy13120        321 SLPFNGLVRYFLKD  334 (384)
Q Consensus       321 ~~~~~~~i~y~l~~  334 (384)
                      .+  .-.+.|...+
T Consensus       152 ~g--~vtV~~~T~d  163 (298)
T 3rb5_A          152 RG--TVIVPYWTEN  163 (298)
T ss_dssp             CS--CEEEEEEEEE
T ss_pred             CC--CEEEEEEecC
Confidence            32  3467787665

>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A

Probab=94.36  E-value=2.4  Score=37.39  Aligned_cols=144  Identities=19%  Similarity=0.160  Sum_probs=74.6

Q ss_pred             cCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCC---CCeeeeCcceEEEEc----------e
Q psy13120         72 NDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA---TPFSLGPVDGLLRVA----------Q  137 (384)
Q Consensus        72 Nd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~---~~F~i~~~~G~i~~~----------~  137 (384)
                      +|+++.|... ....|.|+.  |+....+.-.. +......+.|...++.+   ..|.-  .+|.|...          .
T Consensus         6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~~--~~gtl~F~~Get~kti~V~   80 (298)
T 3rb5_A            6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFVG--RKGLLSFPPGVDEQRFRIE   80 (298)
T ss_dssp             -----CEEESSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBCC--CEEEEEECTTCCEECCEEC
T ss_pred             CCCceEEEEeCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCccc--cceEEEECCCceEEEEEEE
Confidence            4556677666 677899986  55544444332 33344558888776632   12321  23544432          1


Q ss_pred             eCC---ccCCCeEEEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCc
Q psy13120        138 KLD---REIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGING  214 (384)
Q Consensus       138 ~ld---~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~  214 (384)
                      -+|   +|....|.+.+..-. ++..+......+|+|.| ||.+|.|....-...|.|+.  |....+|.-.-.- ...-
T Consensus        81 I~dD~~~E~dEtF~v~Ls~p~-~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~-~g~v  155 (298)
T 3rb5_A           81 VIDDDVFEEDECFYIRLFNPS-EGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGA-RGTV  155 (298)
T ss_dssp             BCCCSSCCCCEEEEEEEECCC-TTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCC-CSCE
T ss_pred             EeCCCCccCcEEEEEEEeCCC-CCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecC-CCCE
Confidence            122   444455555544321 22233333455566666 46688887766678899985  5665665544332 2244


Q ss_pred             eEEEEEEeCCC
Q psy13120        215 RVRYTIISGDD  225 (384)
Q Consensus       215 ~i~y~i~~~~~  225 (384)
                      .+.|....|..
T Consensus       156 tV~~~T~dGTA  166 (298)
T 3rb5_A          156 IVPYWTENDTA  166 (298)
T ss_dssp             EEEEEEEEC--
T ss_pred             EEEEEecCCcc
Confidence            57787665543

>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}

Probab=92.67  E-value=0.46  Score=34.65  Aligned_cols=83  Identities=18%  Similarity=0.277  Sum_probs=51.2

Q ss_pred             cCCCCEEccCceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEceeCCccCCCeEEEEE
Q psy13120         72 NDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEI  151 (384)
Q Consensus        72 Nd~~P~f~~~~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V  151 (384)
                      .+.+|.|.......|..+...... ..+.|+|...+.-                    +..|.+...+|......|.++.
T Consensus         7 ~~~~P~It~~~d~tI~~Gd~fd~~-~gvtA~D~~DGDl--------------------T~~I~V~g~Vdt~k~G~Y~VtY   65 (103)
T 2kpn_A            7 SDLEPKLTVPVGATIHVGDSFVPM-AEVLAIDKEDGDL--------------------TSKIKVDGEVDTTKAGTYVLTY   65 (103)
T ss_dssp             CCCCCEEECCSEEEEETTCCCCHH-HHCEEECSSSCBC--------------------GGGCEEESCCCSSSCEEEEEEE
T ss_pred             CCCCCEEEeCCCEEEECCCCcccc-cCcEEEcCCCCCc--------------------ceeEEEeCcccCCCceEEEEEE
Confidence            356888876644555544332211 1256776553220                    1233334567888889999999


Q ss_pred             EEEeCCCCCCceeEEEEEEeccCCCC
Q psy13120        152 KAKDRGEPSKSSRTKFFIRLLDENDN  177 (384)
Q Consensus       152 ~a~d~~~~~~~~~~~v~I~V~dvnd~  177 (384)
                      .++|..+  ..++++.+|+|.+..+.
T Consensus        66 ~VtDs~G--n~~t~trtVtV~~~~e~   89 (103)
T 2kpn_A           66 TVTDSKG--HEVTAKQTVTVKVREEV   89 (103)
T ss_dssp             EEECTTS--CEEEEEEEEEEECSSCC
T ss_pred             EEEcCCC--CEEEEEEEEEEeCCCcc
Confidence            9999865  56677888888765543

>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}

Probab=92.16  E-value=1.6  Score=40.58  Aligned_cols=90  Identities=16%  Similarity=0.220  Sum_probs=57.2

Q ss_pred             CCCCEEccC-c------eeEeeCCCCCCcEEEEEEE---EeCCCCCCceEEEEEEcCC-C----CCeeee-CcceEEEEc
Q psy13120         73 DNAPEFITA-N------ETTIPENSPLNTVVAALKA---IDRDEGQNSYVEYSIINSE-A----TPFSLG-PVDGLLRVA  136 (384)
Q Consensus        73 d~~P~f~~~-~------~~~v~E~~~~gt~v~~~~a---~D~D~~~~~~~~y~l~~~~-~----~~F~i~-~~~G~i~~~  136 (384)
                      +++|+..-. .      ...+.+    |.. ..|.|   +|+|   +..++|+-..-. .    +...|. .....+.++
T Consensus       331 NhaPVa~iag~~g~~p~~~~v~a----G~t-VtLdAs~SsDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft  402 (437)
T 2yhg_A          331 NHHPVPVVNNDANEAVMYLNASA----GST-VSLDASGSSDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQ  402 (437)
T ss_dssp             CCCCBCCBTTBCCSSCEEEEECT----TCE-EEEECTTCBCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEE
T ss_pred             CCCCEEEecCCCcccccceEecC----CCE-EEEEeeeeeCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEE
Confidence            358876633 2      334443    333 34444   4777   344788776442 1    245664 344566666


Q ss_pred             eeCCccCCCeEEEEEEEEeCCCCCCceeEEEEEEe
Q psy13120        137 QKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRL  171 (384)
Q Consensus       137 ~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V  171 (384)
                      .+-+ +....|.|.+.|+|.+.|.+++...|.|+|
T Consensus       403 ~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV  436 (437)
T 2yhg_A          403 IPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV  436 (437)
T ss_dssp             CCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred             eCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence            5543 456899999999999988899999998887

>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}

Probab=91.85  E-value=1.6  Score=40.47  Aligned_cols=67  Identities=16%  Similarity=0.206  Sum_probs=45.3

Q ss_pred             EeCCCCCCceEEEEEEeCCCC----CCeEEE-CCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEE
Q psy13120        206 TDLDDGINGRVRYTIISGDDN----HDLTIS-EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILV  280 (384)
Q Consensus       206 ~D~D~~~~~~i~y~i~~~~~~----~~f~i~-~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V  280 (384)
                      +|+|   +..++|+-..-...    ....|. ..+..+.++.+-+ +....|+|+++|+|.+.+..    ++...|.|+|
T Consensus       365 sDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~l----Ts~~rViVtV  436 (437)
T 2yhg_A          365 SDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNL----YAYRRVVINV  436 (437)
T ss_dssp             BCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCC----EEEEEEEEEE
T ss_pred             eCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCc----cEEeEEEEEe
Confidence            3777   56788888643322    245664 4445666665544 45679999999999987654    6677777776

>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.54  E-value=0.56  Score=34.17  Aligned_cols=32  Identities=16%  Similarity=0.400  Sum_probs=27.3

Q ss_pred             CCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecC
Q psy13120         37 TKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVND   73 (384)
Q Consensus        37 ~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd   73 (384)
                      ....|.|++.++|..|     .+++..++|+|...++
T Consensus        67 ~~G~y~f~LTVtD~~G-----~s~s~~v~VtV~~~~~   98 (102)
T 2yrl_A           67 QVGTYVFTLTVKDERN-----LQSQSSVNVIVKEESG   98 (102)
T ss_dssp             CSSEEEEEEEEEBTTC-----CEEEEEEEEEEECCSS
T ss_pred             CCeEEEEEEEEEeCCC-----CEEEeEEEEEEcCCCC
Confidence            4569999999999987     4888999999998765

>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1

Probab=90.56  E-value=2.6  Score=33.19  Aligned_cols=81  Identities=21%  Similarity=0.381  Sum_probs=61.1

Q ss_pred             CCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEE
Q psy13120        177 NNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTI  256 (384)
Q Consensus       177 ~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V  256 (384)
                      .-|-|....|...++-....|..+++|...|...  +..+.|..   +++..|.|.. .|.|.+.+.+-.-. ..-.+.|
T Consensus        32 C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g--~~~~~~~s---sDp~dFkV~~-DGtVya~r~v~L~~-~~~~F~V  104 (159)
T 1op4_A           32 CKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYES---SEPADFKVDE-DGTVYAVRSFPLTA-EQAKFLI  104 (159)
T ss_dssp             CCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEEC---CCSSEEEEET-TTEEEEESCCSCSS-SCEEEEE
T ss_pred             ccCCcCcceeEEeccccccCCceeceeecccCCC--CCceeEEc---CCCCCeEEeC-CCcEEEecceeecC-CCcEEEE
Confidence            4689999999778888888999999999999873  44577764   2333699987 59999988864322 2348889


Q ss_pred             EEEECCCC
Q psy13120        257 QAEDCGGD  264 (384)
Q Consensus       257 ~a~D~~~~  264 (384)
                      .|.|....
T Consensus       105 ~a~D~~t~  112 (159)
T 1op4_A          105 YAQDKETQ  112 (159)
T ss_dssp             EEEETTTT
T ss_pred             EEEcCCCc
Confidence            99996654

>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1

Probab=89.29  E-value=1.1  Score=35.43  Aligned_cols=77  Identities=17%  Similarity=0.273  Sum_probs=55.3

Q ss_pred             CCCcccCCCeeEEEcCCCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcc
Q psy13120        286 NYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLK  365 (384)
Q Consensus       286 ~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~  365 (384)
                      ..|-|.+..|...++-+.  ..|..+++|...|...   +..+.|...+              ...|.|+. .|.|++++
T Consensus        32 C~pGF~~~~~~~~vp~~l--~~g~~lgkV~F~dC~g---~~~~~~~ssD--------------p~dFkV~~-DGtVya~r   91 (159)
T 1op4_A           32 CKTGFPEDVYSAVLPKDV--HEGQPLLNVKFSNCNR---KRKVQYESSE--------------PADFKVDE-DGTVYAVR   91 (159)
T ss_dssp             CCCBCCSCEEEECCCCSS--CSSCCEEECCCBCCSS---CCCEEEECCC--------------SSEEEEET-TTEEEEES
T ss_pred             ccCCcCcceeEEeccccc--cCCceeceeecccCCC---CCceeEEcCC--------------CCCeEEeC-CCcEEEec
Confidence            578999999966666666  3478899999998864   5567776532              34899985 79999988


Q ss_pred             cCCcccccEEEEEEEEEc
Q psy13120        366 SLDREKQAEYLLTLQAMD  383 (384)
Q Consensus       366 ~ld~e~~~~~~l~V~a~D  383 (384)
                      .+..-... -.+.|.|.|
T Consensus        92 ~v~L~~~~-~~F~V~a~D  108 (159)
T 1op4_A           92 SFPLTAEQ-AKFLIYAQD  108 (159)
T ss_dssp             CCSCSSSC-EEEEEEEEE
T ss_pred             ceeecCCC-cEEEEEEEc
Confidence            86432222 277788877

>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.88  E-value=2.7  Score=30.40  Aligned_cols=32  Identities=16%  Similarity=0.293  Sum_probs=26.8

Q ss_pred             ccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCC
Q psy13120        248 RKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDIND  285 (384)
Q Consensus       248 ~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd  285 (384)
                      ....|.|+++|+|..+.      +++.+++|+|...+.
T Consensus        67 ~~G~y~f~LTVtD~~G~------s~s~~v~VtV~~~~~   98 (102)
T 2yrl_A           67 QVGTYVFTLTVKDERNL------QSQSSVNVIVKEESG   98 (102)
T ss_dssp             CSSEEEEEEEEEBTTCC------EEEEEEEEEEECCSS
T ss_pred             CCeEEEEEEEEEeCCCC------EEEeEEEEEEcCCCC
Confidence            46799999999999875      578899999987754

>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0

Probab=84.02  E-value=10  Score=29.00  Aligned_cols=117  Identities=20%  Similarity=0.131  Sum_probs=44.3

Q ss_pred             CCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCC--CeEEECCCcEEEEcc----------cC
Q psy13120        177 NNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNH--DLTISEDNGLLRIAK----------NL  244 (384)
Q Consensus       177 ~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~--~f~i~~~~G~l~~~~----------~l  244 (384)
                      +.+.+....-...|.|+.  |+...+|.-. .+......+.|....|....  -|.  +.+|.|....          -+
T Consensus         3 ~~~~i~F~~~~y~V~E~~--g~~~v~V~R~-g~~~~~v~V~y~t~~gTA~~g~Dy~--~~~g~l~F~~Get~k~i~V~I~   77 (137)
T 3ead_A            3 DPIRMYFEPGHYTVMENC--GEFEVRVVRR-GDISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIEVI   77 (137)
T ss_dssp             --CEEEESSCEEEEEGGG--CEEEEEEEEE-SCCSSCEEEEEEEECSSSCBTTTBC--CCEEEEEECTTCCEEEEEEEBC
T ss_pred             CCEEEEEcCCEEEEECCC--eEEEEEEEEE-CCCCceEEEEEEeECCCcCCCCcEe--EeeEEEEECCCceEEEEEEEEe
Confidence            344444444567788875  4444444333 23334556888877664421  221  1234443321          12


Q ss_pred             -CccccCeEEEEEEEEEC-CCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCC
Q psy13120        245 -NYERKAQYSLTIQAEDC-GGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENT  303 (384)
Q Consensus       245 -D~e~~~~~~l~V~a~D~-~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~  303 (384)
                       |......-+|.|..++. .+....  ....++++|  .|- |.+|.|.-..-...|.|+.
T Consensus        78 dD~~~E~~E~F~v~L~~p~~~a~lg--~~~~atvtI--~dd-D~~g~~~f~~~~~~V~E~~  133 (137)
T 3ead_A           78 DDDVFEEDECFYIRLFNPSEGVKLA--VPMIATVMI--LDD-DHAGIFAFTDSVFEITESV  133 (137)
T ss_dssp             CCSSCCCCEEEEEEEECCCTTCEEC--SCSEEEEEE--ECC-C------------------
T ss_pred             cCCcccCcEEEEEEEECCCCCcEEC--CCcEEEEEE--ECC-CCCCEEEECCCcEEEeccc
Confidence             22223344555566654 222210  123455555  443 6678766555556677765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	384
d1l3wa3	113	b.1.6.1 (A:214-326) C-cadherin ectodomain {African	5e-17
d1l3wa3	113	b.1.6.1 (A:214-326) C-cadherin ectodomain {African	2e-10
d1l3wa3	113	b.1.6.1 (A:214-326) C-cadherin ectodomain {African	9e-07
d1l3wa3	113	b.1.6.1 (A:214-326) C-cadherin ectodomain {African	4e-06
d1l3wa4	107	b.1.6.1 (A:327-433) C-cadherin ectodomain {African	3e-16
d1l3wa4	107	b.1.6.1 (A:327-433) C-cadherin ectodomain {African	8e-16
d1l3wa4	107	b.1.6.1 (A:327-433) C-cadherin ectodomain {African	2e-07
d1l3wa4	107	b.1.6.1 (A:327-433) C-cadherin ectodomain {African	2e-06
d1l3wa2	113	b.1.6.1 (A:101-213) C-cadherin ectodomain {African	1e-15
d1l3wa2	113	b.1.6.1 (A:101-213) C-cadherin ectodomain {African	1e-12
d1l3wa2	113	b.1.6.1 (A:101-213) C-cadherin ectodomain {African	1e-07
d1l3wa2	113	b.1.6.1 (A:101-213) C-cadherin ectodomain {African	5e-06
d1ncja2	114	b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu	1e-15
d1ncja2	114	b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu	6e-10
d1ncja2	114	b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu	8e-08
d1ncja2	114	b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mu	4e-07
d1edha2	112	b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse	1e-14
d1edha2	112	b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse	8e-12
d1edha2	112	b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse	2e-08
d1edha2	112	b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse	1e-05
d2omzb1	104	b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human	2e-14
d2omzb1	104	b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human	4e-13
d2omzb1	104	b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human	1e-08
d2omzb1	104	b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human	2e-05
d1l3wa1	100	b.1.6.1 (A:1-100) C-cadherin ectodomain {African c	7e-14
d1l3wa1	100	b.1.6.1 (A:1-100) C-cadherin ectodomain {African c	3e-13
d1l3wa1	100	b.1.6.1 (A:1-100) C-cadherin ectodomain {African c	1e-09
d1l3wa1	100	b.1.6.1 (A:1-100) C-cadherin ectodomain {African c	4e-05
d1op4a_	136	b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu	9e-13
d1op4a_	136	b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu	7e-12
d1op4a_	136	b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu	4e-04
d1ncia_	102	b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu	3e-12
d1ncia_	102	b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu	1e-11
d1ncia_	102	b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu	2e-07
d1ncia_	102	b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus muscu	2e-04
d1l3wa5	107	b.1.6.1 (A:434-540) C-cadherin ectodomain {African	9e-10
d1l3wa5	107	b.1.6.1 (A:434-540) C-cadherin ectodomain {African	3e-07

>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 74.3 bits (181), Expect = 5e-17
 Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 7/114 (6%)

Query: 175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGR-VRYTIISGDDNHDLTISE 233
           NDN PIFD K+Y+A VPEN  +G  V ++S TDLD            I  ++     I+ 
Sbjct: 2   NDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60

Query: 234 D----NGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDI 283
           D     G+L  AK L++E + QY L I  E+    +       TATV++ V D+
Sbjct: 61  DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPL-PTSTATVTVTVEDV 113

>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 55.4 bits (132), Expect = 2e-10
 Identities = 25/112 (22%), Positives = 37/112 (33%), Gaps = 11/112 (9%)

Query: 72  NDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEAT------PF 124
           NDNAP F        +PEN      V  L   D D       +                 
Sbjct: 2   NDNAPIFDPKTYTALVPENEI-GFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60

Query: 125 SLGPVDGLLRVAQKLDREIKSNYTLEIKAKD---RGEPSKSSRTKFFIRLLD 173
                 G+L  A+ LD E++  Y L+I  ++      P  +S     + + D
Sbjct: 61  DPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVED 112

>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 45.0 bits (105), Expect = 9e-07
 Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 10/101 (9%)

Query: 284 NDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQ 343
           NDN P+F    Y ALV EN      F +  +   D D          +          + 
Sbjct: 2   NDNAPIFDPKTYTALVPENE---IGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNI 58

Query: 344 TQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384
           T           S  G +   K LD E + +Y+L +   ++
Sbjct: 59  T-------TDPESNQGILTTAKGLDFELRKQYVLQITVENA 92

>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 43.5 bits (101), Expect = 4e-06
 Identities = 13/54 (24%), Positives = 22/54 (40%)

Query: 18  FTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDV 71
                + G L+  K LD E +  Y L +   +         +ST  V++ + DV
Sbjct: 60  TDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDV 113

>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 71.9 bits (175), Expect = 3e-16
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 9/112 (8%)

Query: 176 DNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDN 235
           +  P F        V E++S G  ++ + A D D     +     I  D    LT+++DN
Sbjct: 1   NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQK-LSYFIGNDPARWLTVNKDN 59

Query: 236 GLLRIAKNLNYE----RKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDI 283
           G++    NL+ E    +   Y++ +   D G          T T+ + V D+
Sbjct: 60  GIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSV----GTGTGTLILHVLDV 107

>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 70.8 bits (172), Expect = 8e-16
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 5/106 (4%)

Query: 73  DNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDG 131
           + AP F+ A     + E+      + +L A D D+ Q   + Y I N  A   ++   +G
Sbjct: 1   NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNG 60

Query: 132 LLRVAQKLDREIK----SNYTLEIKAKDRGEPSKSSRTKFFIRLLD 173
           ++     LDRE +    + YT+ +   D G    +      + +LD
Sbjct: 61  IVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLD 106

>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 46.9 bits (110), Expect = 2e-07
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 7   YSIVSGDDEEIFTINPSNGTLSNLKHLDRETK----SSYNLVVMATDMAKPPQKRLSSTT 62
              +  D     T+N  NG ++   +LDRE++    ++Y ++++ TD         + T 
Sbjct: 42  SYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSV---GTGTG 98

Query: 63  QVSIVIRDV 71
            + + + DV
Sbjct: 99  TLILHVLDV 107

>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 43.8 bits (102), Expect = 2e-06
 Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 19/104 (18%)

Query: 285 DNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQT 344
           +  P F+ +     V+E+   G   +I+++ A D D      L  +   D          
Sbjct: 1   NEAPFFVPAVSRVDVSEDLSRG--EKIISLVAQDPDKQQIQKLSYFIGND---------- 48

Query: 345 QGGTGDLFRVNSTTGDIYLLKSLDRE----KQAEYLLTLQAMDS 384
                    VN   G +    +LDRE    K   Y + +   D 
Sbjct: 49  ---PARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDD 89

>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 70.5 bits (171), Expect = 1e-15
 Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 12/117 (10%)

Query: 174 ENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGI---NGRVRYTIISGDDNHDLT 230
           +NDN P F    +  SV E +  G  V+ VSATD DD I   NG + Y+I+  D    + 
Sbjct: 1   QNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP 60

Query: 231 -----ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
                  E   +  I   L+ E+  +Y+LT+QA D  G              I ++D
Sbjct: 61  NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG----LSVEGKAIIQITD 113

>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 62.0 bits (149), Expect = 1e-12
 Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 10/112 (8%)

Query: 72  NDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINSEATPFSLG 127
           NDN P+F       ++ E     T V A+ A D D+     N  + YSI+  +       
Sbjct: 2   NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61

Query: 128 ------PVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLD 173
                     +  +   LDRE    YTL ++A D      S   K  I++ D
Sbjct: 62  LFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113

>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 47.7 bits (112), Expect = 1e-07
 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 284 NDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQ 343
           NDN P F    +   V E   PG     ++    D +    NG++ Y +           
Sbjct: 2   NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPN 61

Query: 344 TQGGTGDLFRVNSTTGDIYLLKS-LDREKQAEYLLTLQAMDS 384
                  LF +N  TG I L+ + LDREK  EY LT+QA D 
Sbjct: 62  -------LFTINRETGVISLIGTGLDREKFPEYTLTVQATDL 96

>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 113

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 43.1 bits (100), Expect = 5e-06
 Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 8/72 (11%)

Query: 4   RLEYSIVSGDDE----EIFTINPSNGTLSNLKH-LDRETKSSYNLVVMATDMAKPPQKRL 58
            L YSI+  D E     +FTIN   G +S +   LDRE    Y L V ATD+       L
Sbjct: 45  VLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG---L 101

Query: 59  SSTTQVSIVIRD 70
           S   +  I I D
Sbjct: 102 SVEGKAIIQITD 113

>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 70.5 bits (171), Expect = 1e-15
 Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDG--INGRVRYTIISGDDNHDLT-- 230
           NDN P F  + ++ SVPE    G  V+ V+A D DD   +NG +RY I+S   +      
Sbjct: 1   NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60

Query: 231 ---ISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
               +E   ++ +A  L+ E+  QY+L IQA D  G+       +TAT  I V+D
Sbjct: 61  FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYG-LSNTATAVITVTD 114

>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.3 bits (129), Expect = 6e-10
 Identities = 30/114 (26%), Positives = 41/114 (35%), Gaps = 12/114 (10%)

Query: 72  NDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATP------- 123
           NDN PEF+      ++PE S   T V  + AID D+                P       
Sbjct: 1   NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNM 60

Query: 124 FSLGPVDGLLRVAQKL-DREIKSNYTLEIKAKDRGEP---SKSSRTKFFIRLLD 173
           F++    G +       DRE    YTL I+A D         S+     I + D
Sbjct: 61  FTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114

>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.2 bits (113), Expect = 8e-08
 Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 9/102 (8%)

Query: 284 NDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQ 343
           NDN P FLH  +   V E + PG    +MTV A DAD       +  +   S A S  S 
Sbjct: 1   NDNRPEFLHQVWNGSVPEGSKPG--TYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSP 58

Query: 344 TQGGTGDLFRVNSTTGDIYLLKSL-DREKQAEYLLTLQAMDS 384
                 ++F +N+ TGDI  + +  DREK  +Y L +QA D 
Sbjct: 59  ------NMFTINNETGDIITVAAGLDREKVQQYTLIIQATDM 94

>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 114

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.2 bits (108), Expect = 4e-07
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 12  GDDEEIFTINPSNGTLSNLKHLD-RETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRD 70
                +FTIN   G +  +     RE    Y L++ ATDM   P   LS+T    I + D
Sbjct: 55  TPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114

>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: E-cadherin (epithelial)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.4 bits (163), Expect = 1e-14
 Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 12/116 (10%)

Query: 175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGI---NGRVRYTIISGDD----NH 227
           NDN P F  + +  SV E    G +V++VSATD DD +   N  + YTI+S D      +
Sbjct: 1   NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60

Query: 228 DLTISEDNGLLRIAKNL-NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
             T++ D G++ +  +  + E    Y+L +QA D  G+        TA   I V D
Sbjct: 61  MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEG----LSTTAKAVITVKD 112

>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: E-cadherin (epithelial)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.4 bits (142), Expect = 8e-12
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 10/112 (8%)

Query: 72  NDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINSEATP---- 123
           NDN PEF     E ++ E +   T V  + A D D+     N+ + Y+I++ +       
Sbjct: 1   NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60

Query: 124 -FSLGPVDGLLRVAQKLD-REIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLD 173
            F++    G++ V      RE    YTL ++A D      S+  K  I + D
Sbjct: 61  MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112

>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: E-cadherin (epithelial)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.7 bits (117), Expect = 2e-08
 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 8/102 (7%)

Query: 284 NDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQ 343
           NDN P F    +   V E  +PG S   ++    D D   +N  + Y +        +  
Sbjct: 1   NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 60

Query: 344 TQGGTGDLFRVNSTTGDIYLLKSL-DREKQAEYLLTLQAMDS 384
                  +F VN  TG I +L S  DRE    Y L +QA D 
Sbjct: 61  -------MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADL 95

>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]} Length = 112

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: E-cadherin (epithelial)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.6 bits (96), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 2   NGRLEYSIVSGDDE----EIFTINPSNGTLSNLKHLD-RETKSSYNLVVMATDMAKPPQK 56
           N  + Y+IVS D E     +FT+N   G +S L     RE+  +Y LVV A D+      
Sbjct: 42  NAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEG-- 99

Query: 57  RLSSTTQVSIVIRD 70
            LS+T +  I ++D
Sbjct: 100 -LSTTAKAVITVKD 112

>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: E-cadherin (epithelial)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 2e-14
 Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 6/95 (6%)

Query: 85  TIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEAT-----PFSLGPVDGLLRVAQKL 139
           + PEN         L  I  ++ +   V YSI    A       F +    G L+V + L
Sbjct: 11  SCPENEK-GPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPL 69

Query: 140 DREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDE 174
           DRE  + YTL   A      +     +  I + D+
Sbjct: 70  DRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ 104

>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: E-cadherin (epithelial)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 4e-13
 Identities = 25/108 (23%), Positives = 39/108 (36%), Gaps = 9/108 (8%)

Query: 179 PIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHD----LTISED 234
           P+        S PEN   G     +     +    G+V Y+I     +        I  +
Sbjct: 1   PLGSWVIPPISCPEN-EKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERE 59

Query: 235 NGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
            G L++ + L+ ER A Y+L   A    G        D   + I V+D
Sbjct: 60  TGWLKVTEPLDRERIATYTLFSHAVSSNG----NAVEDPMEILITVTD 103

>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: E-cadherin (epithelial)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 1e-08
 Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 1   DNGRLEYSIVS----GDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQK 56
             G++ YSI           +F I    G L   + LDRE  ++Y L   A         
Sbjct: 33  KEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNA-- 90

Query: 57  RLSSTTQVSIVIRD 70
            +    ++ I + D
Sbjct: 91  -VEDPMEILITVTD 103

>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: E-cadherin (epithelial)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 2e-05
 Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 11/86 (12%)

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
             EN   GP      +    ++     G V Y +   GA             +F +   T
Sbjct: 12  CPENE-KGPF--PKNLVQIKSNK-DKEGKVFYSITGQGAD-------TPPVGVFIIERET 60

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
           G + + + LDRE+ A Y L   A+ S
Sbjct: 61  GWLKVTEPLDRERIATYTLFSHAVSS 86

>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 64.8 bits (157), Expect = 7e-14
 Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 189 SVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDL----TISEDNGLLRIAKNL 244
            V EN   G    ++     +     +V Y+I     ++       I  + G + + + L
Sbjct: 8   KVSEN-ERGPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPL 66

Query: 245 NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
           + E   +Y L+  A    G   E    +   ++I V D
Sbjct: 67  DREEYDKYVLSSHAVSENGSPVE----EPMEITINVID 100

>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 63.2 bits (153), Expect = 3e-13
 Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 6/94 (6%)

Query: 85  TIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATP-----FSLGPVDGLLRVAQKL 139
            + EN         L  I  ++ + + V YSI    A       F +    G + V + L
Sbjct: 8   KVSENER-GPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPL 66

Query: 140 DREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLD 173
           DRE    Y L   A            +  I ++D
Sbjct: 67  DREEYDKYVLSSHAVSENGSPVEEPMEITINVID 100

>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 52.8 bits (126), Expect = 1e-09
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 1   DNGRLEYSIVSGDDEE----IFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQK 56
              ++ YSI     +     +F I    G +   + LDRE    Y L   A      P  
Sbjct: 30  RFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSP-- 87

Query: 57  RLSSTTQVSIVIRD 70
            +    +++I + D
Sbjct: 88  -VEEPMEITINVID 100

>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 40.1 bits (93), Expect = 4e-05
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 11/86 (12%)

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
           V+EN   GP      +    ++       V Y +   GA +           +FR+   T
Sbjct: 9   VSENE-RGPF--PKRLVQIKSNK-DRFNKVYYSITGQGADNPPQ-------GVFRIEWET 57

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
           G + + + LDRE+  +Y+L+  A+  
Sbjct: 58  GWMLVTRPLDREEYDKYVLSSHAVSE 83

>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.7 bits (151), Expect = 9e-13
 Identities = 15/123 (12%), Positives = 37/123 (30%), Gaps = 12/123 (9%)

Query: 173 DENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTIS 232
           +       F    YSA +P+++  G  +L V  ++ +     +   +  +          
Sbjct: 5   EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVD----- 59

Query: 233 EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLH 292
            ++G +   ++     + Q    I A+D               V++         P+   
Sbjct: 60  -EDGTVYAVRSFPLTAE-QAKFLIYAQDKE-----TQEKWQVAVNLSREPTLTEEPMKEP 112

Query: 293 SPY 295
              
Sbjct: 113 HEI 115

>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.4 bits (145), Expect = 7e-12
 Identities = 15/135 (11%), Positives = 36/135 (26%), Gaps = 9/135 (6%)

Query: 70  DVNDNAPEFITAN-ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGP 128
           ++      F        +P++      +  +K  + +  +    E S             
Sbjct: 5   EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVDE---- 60

Query: 129 VDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSA 188
            DG +   +      +      I A+D+    K       +         P+ +      
Sbjct: 61  -DGTVYAVRSFPLTAE-QAKFLIYAQDKETQEKWQVA-VNLSREPTLTEEPMKEPHEIEE 117

Query: 189 -SVPENISVGATVLQ 202
              P  ++  +  LQ
Sbjct: 118 IVFPRQLAKHSGALQ 132

>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 136

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (87), Expect = 4e-04
 Identities = 6/39 (15%), Positives = 16/39 (41%), Gaps = 2/39 (5%)

Query: 282 DINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDAD 320
           +I      F    Y A++ ++   G    ++ V+  + +
Sbjct: 5   EIALCKTGFPEDVYSAVLPKDVHEGQP--LLNVKFSNCN 41

>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.2 bits (145), Expect = 3e-12
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 6/94 (6%)

Query: 85  TIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATP-----FSLGPVDGLLRVAQKL 139
            +PENS        L  I     +N  + YS+    A       F + P+ G L V + L
Sbjct: 10  NLPENSR-GPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPL 68

Query: 140 DREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLD 173
           DRE+ + + L   A D       +     I ++D
Sbjct: 69  DRELIARFHLRAHAVDINGNQVENPIDIVINVID 102

>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.1 bits (142), Expect = 1e-11
 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 9/98 (9%)

Query: 189 SVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHD----LTISEDNGLLRIAKNL 244
           ++PEN S G    ++         N  +RY++     +        I+  +G L + K L
Sbjct: 10  NLPEN-SRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPL 68

Query: 245 NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282
           + E  A++ L   A D  G+  E    +   + I V D
Sbjct: 69  DRELIARFHLRAHAVDINGNQVE----NPIDIVINVID 102

>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.8 bits (110), Expect = 2e-07
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 1   DNGRLEYSIVS----GDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQK 56
            N  L YS+           IF INP +G LS  K LDRE  + ++L   A D+      
Sbjct: 32  KNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQ-- 89

Query: 57  RLSSTTQVSIVIRD 70
            + +   + I + D
Sbjct: 90  -VENPIDIVINVID 102

>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.3 bits (88), Expect = 2e-04
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 299 VNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTT 358
           + EN+  GP      +    +     N  +RY +   GA             +F +N  +
Sbjct: 11  LPENS-RGPF--PQELVRIRSGR-DKNLSLRYSVTGPGAD-------QPPTGIFIINPIS 59

Query: 359 GDIYLLKSLDREKQAEYLLTLQAMDS 384
           G + + K LDRE  A + L   A+D 
Sbjct: 60  GQLSVTKPLDRELIARFHLRAHAVDI 85

>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 53.5 bits (127), Expect = 9e-10
 Identities = 15/116 (12%), Positives = 33/116 (28%), Gaps = 12/116 (10%)

Query: 175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHD-LTISE 233
           NDN P+   + +  ++ +          ++ +D D   N       +S   +       +
Sbjct: 1   NDNGPVPSPRVF--TMCDQNPEP---QVLTISDADIPPNTYPYKVSLSHGSDLTWKAELD 55

Query: 234 DNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPV 289
             G   +       +K  YS+ +   D   +           V+  V         
Sbjct: 56  SKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNP------QLTVVNATVCSCEGKAIK 105

>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

 Score = 46.6 bits (109), Expect = 3e-07
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 4/108 (3%)

Query: 72  NDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDG 131
           NDN P   +    T+ + +P   V+    A D       Y       S+ T  +     G
Sbjct: 1   NDNGPVP-SPRVFTMCDQNPEPQVLTISDA-DIPPNTYPYKVSLSHGSDLTWKAELDSKG 58

Query: 132 LLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNP 179
              +     +  K +Y++ +   D     +   T     +        
Sbjct: 59  TSMLLSPTQQLKKGDYSIYVLLSDAQNNPQL--TVVNATVCSCEGKAI 104

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	384
d1l3wa4	107	C-cadherin ectodomain {African clawed frog (Xenopu	99.83
d1l3wa2	113	C-cadherin ectodomain {African clawed frog (Xenopu	99.81
d1edha2	112	E-cadherin (epithelial) {Mouse (Mus musculus) [Tax	99.81
d1l3wa2	113	C-cadherin ectodomain {African clawed frog (Xenopu	99.81
d1edha2	112	E-cadherin (epithelial) {Mouse (Mus musculus) [Tax	99.8
d1l3wa4	107	C-cadherin ectodomain {African clawed frog (Xenopu	99.79
d1ncja2	114	N-cadherin (neural) {Mouse (Mus musculus) [TaxId:	99.77
d1ncja2	114	N-cadherin (neural) {Mouse (Mus musculus) [TaxId:	99.75
d1op4a_	136	N-cadherin (neural) {Mouse (Mus musculus) [TaxId:	99.73
d1op4a_	136	N-cadherin (neural) {Mouse (Mus musculus) [TaxId:	99.72
d1l3wa3	113	C-cadherin ectodomain {African clawed frog (Xenopu	99.7
d1l3wa3	113	C-cadherin ectodomain {African clawed frog (Xenopu	99.68
d1l3wa5	107	C-cadherin ectodomain {African clawed frog (Xenopu	99.61
d1l3wa5	107	C-cadherin ectodomain {African clawed frog (Xenopu	99.6
d1l3wa1	100	C-cadherin ectodomain {African clawed frog (Xenopu	99.57
d1ncia_	102	N-cadherin (neural) {Mouse (Mus musculus) [TaxId:	99.56
d2omzb1	104	E-cadherin (epithelial) {Human (Homo sapiens) [Tax	99.54
d1ncia_	102	N-cadherin (neural) {Mouse (Mus musculus) [TaxId:	99.52
d1l3wa1	100	C-cadherin ectodomain {African clawed frog (Xenopu	99.51
d2omzb1	104	E-cadherin (epithelial) {Human (Homo sapiens) [Tax	99.49
d1u2ca1	103	Dystroglycan, N-terminal domain {Mouse (Mus muscul	95.84
d1u2ca1	103	Dystroglycan, N-terminal domain {Mouse (Mus muscul	93.48

>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.83  E-value=9.3e-21  Score=143.12  Aligned_cols=102  Identities=25%  Similarity=0.359  Sum_probs=95.3

Q ss_pred             CCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEceeCCccC----CCeE
Q psy13120         73 DNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREI----KSNY  147 (384)
Q Consensus        73 d~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~----~~~~  147 (384)
                      ||+|.|... +.+.|+|+.++|+.++++.|+|+|.+.++.++|++.+...++|.|++.+|.|++++.||||.    ...|
T Consensus         1 Dn~P~F~~~~~~~~v~E~~~~g~~v~~v~A~D~D~~~~~~i~y~i~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~~~y   80 (107)
T d1l3wa4           1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTY   80 (107)
T ss_dssp             CCCCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSSCCSSCC
T ss_pred             CcCCCcCCCeEEEEEECCCCCCCEEEEeEEecCCcCcCCceeEEecCCCcccceeccccceEEEccccChhhccccCCeE
Confidence            579999988 89999999999999999999999999999999999887778999999999999999999995    3679


Q ss_pred             EEEEEEEeCCCCCCceeEEEEEEeccC
Q psy13120        148 TLEIKAKDRGEPSKSSRTKFFIRLLDE  174 (384)
Q Consensus       148 ~l~V~a~d~~~~~~~~~~~v~I~V~dv  174 (384)
                      .|.|.|+|.|.|++++++++.|+|.||
T Consensus        81 ~l~v~a~D~g~p~~~~t~~v~V~V~DV  107 (107)
T d1l3wa4          81 TVIMLVTDDGVSVGTGTGTLILHVLDV  107 (107)
T ss_dssp             EEEEEEEECSSSCCCCCEEEECCBCCC
T ss_pred             EEEEEEEECCcCCcEEEEEEEEEEEeC
Confidence            999999999999999999999999886

>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.81  E-value=1.8e-20  Score=143.02  Aligned_cols=103  Identities=30%  Similarity=0.450  Sum_probs=93.4

Q ss_pred             ecCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcCC-----CCCeeeeCcceEEEEc-eeCC
Q psy13120         71 VNDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINSE-----ATPFSLGPVDGLLRVA-QKLD  140 (384)
Q Consensus        71 vNd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~---~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~-~~ld  140 (384)
                      .|||+|.|... |.+.|+|++++|+.|+++.|+|+|.+   .|+.+.|+|.+..     .++|.|++.+|.|++. +.||
T Consensus         1 eNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~~n~~i~y~i~~~~~~~~~~~~F~i~~~tG~i~~~~~~LD   80 (113)
T d1l3wa2           1 QNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLD   80 (113)
T ss_dssp             CSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCC
T ss_pred             CCCCCCccCCCeEEEEEECCCCCCCEEEEEEeecccccccccceEEEEEEecCCCCccccceeeeeecceeEEEeccccC
Confidence            49999999988 99999999999999999999999975   4678999997753     3679999999999985 5799


Q ss_pred             ccCCCeEEEEEEEEeCCCCCCceeEEEEEEecc
Q psy13120        141 REIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLD  173 (384)
Q Consensus       141 ~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~d  173 (384)
                      ||....|.|.|+|+|.++|++++.++|.|+|.|
T Consensus        81 ~E~~~~y~l~V~a~D~~~~~~~~~~~v~I~V~D  113 (113)
T d1l3wa2          81 REKFPEYTLTVQATDLEGAGLSVEGKAIIQITD  113 (113)
T ss_dssp             TTTCCEEEEEEEEEHHHHTSCEEECCEEEEEEC
T ss_pred             cccCCEEEEEEEEEECCCCCcEEEEEEEEEEEC
Confidence            999999999999999988899999999999986

>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: E-cadherin (epithelial)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=5.3e-20  Score=140.31  Aligned_cols=102  Identities=31%  Similarity=0.465  Sum_probs=92.4

Q ss_pred             cCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcCC-----CCCeeeeCcceEEEE-ceeCCc
Q psy13120         72 NDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINSE-----ATPFSLGPVDGLLRV-AQKLDR  141 (384)
Q Consensus        72 Nd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~---~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~-~~~ld~  141 (384)
                      |||+|.|... |.+.|+|++++|+.++++.|+|+|.+   .++.++|+|.++.     ..+|.|++.+|.|++ .+.|||
T Consensus         1 NDn~P~F~~~~y~~~V~E~~~~gt~v~~v~A~D~D~g~~~~n~~v~y~i~~~~~~~~~~~~F~i~~~tG~i~~~~~~lD~   80 (112)
T d1edha2           1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDR   80 (112)
T ss_dssp             SCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTCSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCT
T ss_pred             CCCCCccCCCEEEEEEECCCCCCCEEEEEEEEecccCCccccceEEEEEecCCccccceeEEEEecccceEEEEeccccc
Confidence            8999999988 99999999999999999999999975   4667999997652     357999999999986 457999


Q ss_pred             cCCCeEEEEEEEEeCCCCCCceeEEEEEEecc
Q psy13120        142 EIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLD  173 (384)
Q Consensus       142 e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~d  173 (384)
                      |....|.|+|.|+|.+.|++++.++|.|.|.|
T Consensus        81 E~~~~y~l~V~a~D~g~~~~~~~~~v~I~V~D  112 (112)
T d1edha2          81 ESYPTYTLVVQAADLQGEGLSTTAKAVITVKD  112 (112)
T ss_dssp             TTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred             ccCcEEEEEEEEEECCCCccEEEEEEEEEEEC
Confidence            99999999999999999999999999999986

>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.81  E-value=6.4e-20  Score=139.96  Aligned_cols=105  Identities=34%  Similarity=0.557  Sum_probs=93.6

Q ss_pred             CCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCC---CCceEEEEEEeCCC----CCCeEEECCCcEEEEc-ccCC
Q psy13120        174 ENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDG---INGRVRYTIISGDD----NHDLTISEDNGLLRIA-KNLN  245 (384)
Q Consensus       174 vnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~---~~~~i~y~i~~~~~----~~~f~i~~~~G~l~~~-~~lD  245 (384)
                      .|||+|.|....|.+.|+|++++|+.|+++.|.|+|.+   .++.+.|+|..+..    ...|.|++.+|.|++. +.||
T Consensus         1 eNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~~n~~i~y~i~~~~~~~~~~~~F~i~~~tG~i~~~~~~LD   80 (113)
T d1l3wa2           1 QNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLD   80 (113)
T ss_dssp             CSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCC
T ss_pred             CCCCCCccCCCeEEEEEECCCCCCCEEEEEEeecccccccccceEEEEEEecCCCCccccceeeeeecceeEEEeccccC
Confidence            49999999999999999999999999999999999975   46789999987654    3679999999999885 5799


Q ss_pred             ccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120        246 YERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       246 ~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      ||....|.|+|.|+|.++++.    +++++|.|+|.|
T Consensus        81 ~E~~~~y~l~V~a~D~~~~~~----~~~~~v~I~V~D  113 (113)
T d1l3wa2          81 REKFPEYTLTVQATDLEGAGL----SVEGKAIIQITD  113 (113)
T ss_dssp             TTTCCEEEEEEEEEHHHHTSC----EEECCEEEEEEC
T ss_pred             cccCCEEEEEEEEEECCCCCc----EEEEEEEEEEEC
Confidence            999999999999999887764    788999999986

>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: E-cadherin (epithelial)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1.6e-19  Score=137.52  Aligned_cols=104  Identities=38%  Similarity=0.579  Sum_probs=92.6

Q ss_pred             CCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCC---CCceEEEEEEeCCC----CCCeEEECCCcEEEE-cccCCc
Q psy13120        175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDG---INGRVRYTIISGDD----NHDLTISEDNGLLRI-AKNLNY  246 (384)
Q Consensus       175 nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~---~~~~i~y~i~~~~~----~~~f~i~~~~G~l~~-~~~lD~  246 (384)
                      |||+|.|....|.+.|+|+.++|+.|+++.|+|+|.+   .++.+.|+|..+..    ..+|.|++.+|.|.+ .+.|||
T Consensus         1 NDn~P~F~~~~y~~~V~E~~~~gt~v~~v~A~D~D~g~~~~n~~v~y~i~~~~~~~~~~~~F~i~~~tG~i~~~~~~lD~   80 (112)
T d1edha2           1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDR   80 (112)
T ss_dssp             SCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTCSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCT
T ss_pred             CCCCCccCCCEEEEEEECCCCCCCEEEEEEEEecccCCccccceEEEEEecCCccccceeEEEEecccceEEEEeccccc
Confidence            8999999999999999999999999999999999975   35679999986532    467999999999986 457999


Q ss_pred             cccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120        247 ERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       247 e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      |....|.|+|+|+|++.++.    +++++|+|.|.|
T Consensus        81 E~~~~y~l~V~a~D~g~~~~----~~~~~v~I~V~D  112 (112)
T d1edha2          81 ESYPTYTLVVQAADLQGEGL----STTAKAVITVKD  112 (112)
T ss_dssp             TTCCEEEEEEEEETGGGTSC----EEEEEEEEEEEC
T ss_pred             ccCcEEEEEEEEEECCCCcc----EEEEEEEEEEEC
Confidence            99999999999999988764    788999999986

>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.79  E-value=1.1e-19  Score=137.22  Aligned_cols=103  Identities=26%  Similarity=0.385  Sum_probs=94.0

Q ss_pred             CCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCcccc----Ce
Q psy13120        176 DNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERK----AQ  251 (384)
Q Consensus       176 d~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~----~~  251 (384)
                      ||+|.|....|.+.|+|+.++|+.|+++.|+|+|.+.++.++|+|. ++..++|.|++.+|.|++.+.||||..    ..
T Consensus         1 Dn~P~F~~~~~~~~v~E~~~~g~~v~~v~A~D~D~~~~~~i~y~i~-~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~~~   79 (107)
T d1l3wa4           1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIG-NDPARWLTVNKDNGIVTGNGNLDRESEYVKNNT   79 (107)
T ss_dssp             CCCCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEEC-CCSSCCCEEETTTTEEEECSCCCTTSSSCCSSC
T ss_pred             CcCCCcCCCeEEEEEECCCCCCCEEEEeEEecCCcCcCCceeEEec-CCCcccceeccccceEEEccccChhhccccCCe
Confidence            5799999999999999999999999999999999988889999997 456788999999999999999999963    57


Q ss_pred             EEEEEEEEECCCCCcceeeeeEEEEEEEEeec
Q psy13120        252 YSLTIQAEDCGGDTEERIRFDTATVSILVSDI  283 (384)
Q Consensus       252 ~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dv  283 (384)
                      |.|+|.|+|.+.++.    +++++|.|+|.||
T Consensus        80 y~l~v~a~D~g~p~~----~~t~~v~V~V~DV  107 (107)
T d1l3wa4          80 YTVIMLVTDDGVSVG----TGTGTLILHVLDV  107 (107)
T ss_dssp             CEEEEEEEECSSSCC----CCCEEEECCBCCC
T ss_pred             EEEEEEEEECCcCCc----EEEEEEEEEEEeC
Confidence            999999999988775    7889999999886

>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=1.3e-18  Score=132.86  Aligned_cols=107  Identities=39%  Similarity=0.564  Sum_probs=88.6

Q ss_pred             CCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC--CCCceEEEEEEeCC----CCCCeEEECCCcEE-EEcccCCcc
Q psy13120        175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD--GINGRVRYTIISGD----DNHDLTISEDNGLL-RIAKNLNYE  247 (384)
Q Consensus       175 nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~--~~~~~i~y~i~~~~----~~~~f~i~~~~G~l-~~~~~lD~e  247 (384)
                      |||+|.|....|.+.|+|+.++|+.|+++.|+|+|.  +.++.+.|+|.++.    ....|.|++.+|.+ ++.+.||||
T Consensus         1 NDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~n~~i~y~i~~~~~~~~~~~~F~i~~~tG~i~~~~~~lD~E   80 (114)
T d1ncja2           1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNMFTINNETGDIITVAAGLDRE   80 (114)
T ss_dssp             CCSCCCCSCSEEEEEECSSCCTTCEEEECCC-CCSCTTSTTTCCEEEEEEEESCCSCSCCEEECSSSCEEEECSSCCCTT
T ss_pred             CCCCCCcCCCeEEEEEeCCCCCCCEEEEEEEEECCCCccccceeEEEeccCCcCCCccceEEecCccceEEEeccccccc
Confidence            899999999999999999999999999999999995  45788999998643    34679999999975 567789999


Q ss_pred             ccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120        248 RKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       248 ~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      ....|.|+|+|+|.++.+.. ..++.++|.|.|.|
T Consensus        81 ~~~~y~l~V~A~D~~~~~~~-~~ss~~~v~I~V~D  114 (114)
T d1ncja2          81 KVQQYTLIIQATDMEGNPTY-GLSNTATAVITVTD  114 (114)
T ss_dssp             TCSEEEEEEEEESGGGCBTT-BCEEEEEEEEEEC-
T ss_pred             cCCEEEEEEEEEECCCCCCC-CceEEEEEEEEEEC
Confidence            99999999999997654321 13667888888865

>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=9.7e-19  Score=133.62  Aligned_cols=102  Identities=34%  Similarity=0.490  Sum_probs=85.7

Q ss_pred             cCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCC--CCCceEEEEEEcC-----CCCCeeeeCcceEE-EEceeCCcc
Q psy13120         72 NDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDE--GQNSYVEYSIINS-----EATPFSLGPVDGLL-RVAQKLDRE  142 (384)
Q Consensus        72 Nd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~--~~~~~~~y~l~~~-----~~~~F~i~~~~G~i-~~~~~ld~e  142 (384)
                      |||+|.|... |.+.|+|++++|+.|+++.|+|+|.  +.++.++|+|.++     ..+.|.|++.+|.+ .+.++||||
T Consensus         1 NDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~n~~i~y~i~~~~~~~~~~~~F~i~~~tG~i~~~~~~lD~E   80 (114)
T d1ncja2           1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPNMFTINNETGDIITVAAGLDRE   80 (114)
T ss_dssp             CCSCCCCSCSEEEEEECSSCCTTCEEEECCC-CCSCTTSTTTCCEEEEEEEESCCSCSCCEEECSSSCEEEECSSCCCTT
T ss_pred             CCCCCCcCCCeEEEEEeCCCCCCCEEEEEEEEECCCCccccceeEEEeccCCcCCCccceEEecCccceEEEeccccccc
Confidence            8999999988 8999999999999999999999995  5678899999764     24579999999975 567789999


Q ss_pred             CCCeEEEEEEEEeCCCC---CCceeEEEEEEecc
Q psy13120        143 IKSNYTLEIKAKDRGEP---SKSSRTKFFIRLLD  173 (384)
Q Consensus       143 ~~~~~~l~V~a~d~~~~---~~~~~~~v~I~V~d  173 (384)
                      ....|.|.|+|+|.+++   .+++.++|.|.|.|
T Consensus        81 ~~~~y~l~V~A~D~~~~~~~~~ss~~~v~I~V~D  114 (114)
T d1ncja2          81 KVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD  114 (114)
T ss_dssp             TCSEEEEEEEEESGGGCBTTBCEEEEEEEEEEC-
T ss_pred             cCCEEEEEEEEEECCCCCCCCceEEEEEEEEEEC
Confidence            99999999999996543   24677888888765

>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=3.2e-18  Score=134.35  Aligned_cols=124  Identities=10%  Similarity=0.160  Sum_probs=105.0

Q ss_pred             eecCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEceeCCccCCCeEE
Q psy13120         70 DVNDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYT  148 (384)
Q Consensus        70 dvNd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~~  148 (384)
                      |+|++.|.|... |.+.|+|+.++|+.|+++.|+|.|.  ++.+.|++.+.  ..|.|++ +|.|.+.++||+|.. .|.
T Consensus         5 ~~~~c~P~F~~~~Y~~~V~E~~~~Gt~v~~V~a~D~d~--~~~~~y~~~~~--~~F~i~~-~G~I~~~~~ld~e~~-~y~   78 (136)
T d1op4a_           5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYESSEP--ADFKVDE-DGTVYAVRSFPLTAE-QAK   78 (136)
T ss_dssp             CCCCCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEECCCS--SEEEEET-TTEEEEESCCSCSSS-CEE
T ss_pred             CCCCccceecCCeEEEEEECCCCCCCEEEEeEeecCCc--cccceeccccc--eeeeccc-cEEEEEecccCcccc-eEE
Confidence            689999999999 9999999999999999999999996  45589988543  4799998 699999999999974 699


Q ss_pred             EEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccc-eEEEEecCCCCCcEE
Q psy13120        149 LEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKS-YSASVPENISVGATV  200 (384)
Q Consensus       149 l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~-~~~~v~E~~~~g~~v  200 (384)
                      |+|.|+|+|+|. .+.+.|.|.+.+.|++.|.|.... +.+.++|+...|..+
T Consensus        79 l~V~A~D~g~~~-~~~t~V~i~v~d~nd~~p~~~~~~~~~i~~P~~~~~~~~~  130 (136)
T d1op4a_          79 FLIYAQDKETQE-KWQVAVNLSREPTLTEEPMKEPHEIEEIVFPRQLAKHSGA  130 (136)
T ss_dssp             EEEEEEETTTTE-EEEEEEEECCCCCCCCCCSSCCCCSCCCSSCCCCCCCCSC
T ss_pred             EEEEEEecCCcc-eeeeEEEEEEcccCCCCCcccCCCCceEEccCcCCCCCCc
Confidence            999999998765 467789999999999999996544 356778887766543

>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.72  E-value=1.1e-17  Score=131.34  Aligned_cols=119  Identities=16%  Similarity=0.209  Sum_probs=102.0

Q ss_pred             cCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeE
Q psy13120        173 DENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQY  252 (384)
Q Consensus       173 dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~  252 (384)
                      ++|++.|.|.+..|.+.|+|+.+.|+.|++|.|+|+|.  +..+.|++.   ....|.|++ +|.|.+.++||||.. .|
T Consensus         5 ~~~~c~P~F~~~~Y~~~V~E~~~~Gt~v~~V~a~D~d~--~~~~~y~~~---~~~~F~i~~-~G~I~~~~~ld~e~~-~y   77 (136)
T d1op4a_           5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYESS---EPADFKVDE-DGTVYAVRSFPLTAE-QA   77 (136)
T ss_dssp             CCCCCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEECC---CSSEEEEET-TTEEEEESCCSCSSS-CE
T ss_pred             CCCCccceecCCeEEEEEECCCCCCCEEEEeEeecCCc--cccceeccc---cceeeeccc-cEEEEEecccCcccc-eE
Confidence            67899999999999999999999999999999999995  567899884   335699998 599999999999964 69


Q ss_pred             EEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCe-eEEEcCCC
Q psy13120        253 SLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPY-LALVNENT  303 (384)
Q Consensus       253 ~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~-~~~v~e~~  303 (384)
                      .|+|+|+|++.+.     .+.+.|+|.|.|.|++.|.|....+ ...++|+.
T Consensus        78 ~l~V~A~D~g~~~-----~~~t~V~i~v~d~nd~~p~~~~~~~~~i~~P~~~  124 (136)
T d1op4a_          78 KFLIYAQDKETQE-----KWQVAVNLSREPTLTEEPMKEPHEIEEIVFPRQL  124 (136)
T ss_dssp             EEEEEEEETTTTE-----EEEEEEEECCCCCCCCCCSSCCCCSCCCSSCCCC
T ss_pred             EEEEEEEecCCcc-----eeeeEEEEEEcccCCCCCcccCCCCceEEccCcC
Confidence            9999999998764     4678899999999999999975543 45566665

>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.70  E-value=1.9e-17  Score=126.11  Aligned_cols=103  Identities=28%  Similarity=0.382  Sum_probs=88.0

Q ss_pred             ecCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCC--ceEEEEEEcCCCCCeeee----CcceEEEEceeCCccC
Q psy13120         71 VNDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQN--SYVEYSIINSEATPFSLG----PVDGLLRVAQKLDREI  143 (384)
Q Consensus        71 vNd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~--~~~~y~l~~~~~~~F~i~----~~~G~i~~~~~ld~e~  143 (384)
                      .|||+|.|... |.+.|+|+ ++|+.++++.|+|+|.+.+  ..+.|.+.+...+.|.|.    ..+|.|.+.++||||.
T Consensus         1 aNDn~P~F~~~~y~~~v~En-~~g~~v~~v~A~D~D~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~g~i~~~~~lD~E~   79 (113)
T d1l3wa3           1 ANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFEL   79 (113)
T ss_dssp             CCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSS
T ss_pred             CCCCCCEeCCCeEEEEEECC-CCCCEEEEEEEEccccCCcceeEEEEeeccccccceEEEeecCCCceEEEeeeeccccc
Confidence            39999999988 99999999 4799999999999997643  345556655667789885    4678999999999999


Q ss_pred             CCeEEEEEEEEeC---CCCCCceeEEEEEEeccC
Q psy13120        144 KSNYTLEIKAKDR---GEPSKSSRTKFFIRLLDE  174 (384)
Q Consensus       144 ~~~~~l~V~a~d~---~~~~~~~~~~v~I~V~dv  174 (384)
                      ...|.|+|+|+|.   +.|++++.++|+|.|.||
T Consensus        80 ~~~y~l~V~a~D~~~~~~~~~~s~~~V~I~V~DV  113 (113)
T d1l3wa3          80 RKQYVLQITVENAEPFSVPLPTSTATVTVTVEDV  113 (113)
T ss_dssp             CCCEEEEECCEESSCCSSCCCCCCEEEEEEEECC
T ss_pred             CCEEEEEEEEEECCCCCCCceEeEEEEEEEEEeC
Confidence            9999999999997   556789999999999986

>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.68  E-value=1.2e-16  Score=121.62  Aligned_cols=108  Identities=37%  Similarity=0.517  Sum_probs=86.7

Q ss_pred             CCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCce-EEEEEEeCCCCCCeEEE----CCCcEEEEcccCCccc
Q psy13120        174 ENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGR-VRYTIISGDDNHDLTIS----EDNGLLRIAKNLNYER  248 (384)
Q Consensus       174 vnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~-i~y~i~~~~~~~~f~i~----~~~G~l~~~~~lD~e~  248 (384)
                      .|||+|.|....|.+.|+|+ ++|+.|+++.|+|+|.+.+.. ..|.+..+.....|.|.    ..+|.|.+.+.||||.
T Consensus         1 aNDn~P~F~~~~y~~~v~En-~~g~~v~~v~A~D~D~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~g~i~~~~~lD~E~   79 (113)
T d1l3wa3           1 ANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFEL   79 (113)
T ss_dssp             CCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSS
T ss_pred             CCCCCCEeCCCeEEEEEECC-CCCCEEEEEEEEccccCCcceeEEEEeeccccccceEEEeecCCCceEEEeeeeccccc
Confidence            38999999999999999999 579999999999999764332 23334446677889885    4578999999999999


Q ss_pred             cCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeec
Q psy13120        249 KAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDI  283 (384)
Q Consensus       249 ~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dv  283 (384)
                      ...|.|+|+|+|++.... +.++++++|+|.|.||
T Consensus        80 ~~~y~l~V~a~D~~~~~~-~~~~s~~~V~I~V~DV  113 (113)
T d1l3wa3          80 RKQYVLQITVENAEPFSV-PLPTSTATVTVTVEDV  113 (113)
T ss_dssp             CCCEEEEECCEESSCCSS-CCCCCCEEEEEEEECC
T ss_pred             CCEEEEEEEEEECCCCCC-CceEeEEEEEEEEEeC
Confidence            999999999999743211 1137889999999997

>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.61  E-value=9.9e-17  Score=120.69  Aligned_cols=104  Identities=15%  Similarity=0.120  Sum_probs=85.7

Q ss_pred             cCCCCEEccCceeEeeCCCCCCcEEEEEEEEeCCCCCCc-eEEEEEEcCCCCCeeee-CcceEEEEceeCCccCCCeEEE
Q psy13120         72 NDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNS-YVEYSIINSEATPFSLG-PVDGLLRVAQKLDREIKSNYTL  149 (384)
Q Consensus        72 Nd~~P~f~~~~~~~v~E~~~~gt~v~~~~a~D~D~~~~~-~~~y~l~~~~~~~F~i~-~~~G~i~~~~~ld~e~~~~~~l  149 (384)
                      |||+|.|.. +...|.|+.+.+.   .|+|+|+|.+.++ .++|+|.++....|.+. ...|.+...+.||+|....|.|
T Consensus         1 NDNaP~f~~-~~~~v~e~~~~~~---~v~AtD~D~~~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ld~e~~~~y~l   76 (107)
T d1l3wa5           1 NDNGPVPSP-RVFTMCDQNPEPQ---VLTISDADIPPNTYPYKVSLSHGSDLTWKAELDSKGTSMLLSPTQQLKKGDYSI   76 (107)
T ss_dssp             CCSCCCBSC-CCEEECSSSCCCE---EEEBCCSSCTTTTCCCCCBCCSCSSSSCBCCBCTTSSEEEEBCSSCCCSSCBCC
T ss_pred             CCCCCccCC-CEEEEEecCCCce---eEEEEcCccCccceeEeeeeecccccccccccccceeeeeeeccccccceeEEE
Confidence            899999975 5667999988764   4789999998877 48899988876667664 3455555667899999999999


Q ss_pred             EEEEEeCCCCCCceeEEEEEEeccCCCCCCce
Q psy13120        150 EIKAKDRGEPSKSSRTKFFIRLLDENDNNPIF  181 (384)
Q Consensus       150 ~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f  181 (384)
                      .|.|+|+|+|++  ..+++|+|.|+|||+|.+
T Consensus        77 ~V~a~D~G~p~~--~~tv~V~V~Dc~dn~~~c  106 (107)
T d1l3wa5          77 YVLLSDAQNNPQ--LTVVNATVCSCEGKAIKC  106 (107)
T ss_dssp             EEECCSSSCCCE--EEECCEEECSCSSSCCCC
T ss_pred             EEEEEeCCCCce--EEEEEEEEEEeeCCcCcc
Confidence            999999998765  467899999999999875

>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.60  E-value=2.2e-16  Score=118.73  Aligned_cols=105  Identities=15%  Similarity=0.155  Sum_probs=83.3

Q ss_pred             CCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCc-eEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEE
Q psy13120        175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGING-RVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYS  253 (384)
Q Consensus       175 nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~-~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~  253 (384)
                      |||+|.|....  .+|.|+.+.+.   .|.|+|+|.+.++ .++|+|.++....++......|.+...+.||+|....|.
T Consensus         1 NDNaP~f~~~~--~~v~e~~~~~~---~v~AtD~D~~~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ld~e~~~~y~   75 (107)
T d1l3wa5           1 NDNGPVPSPRV--FTMCDQNPEPQ---VLTISDADIPPNTYPYKVSLSHGSDLTWKAELDSKGTSMLLSPTQQLKKGDYS   75 (107)
T ss_dssp             CCSCCCBSCCC--EEECSSSCCCE---EEEBCCSSCTTTTCCCCCBCCSCSSSSCBCCBCTTSSEEEEBCSSCCCSSCBC
T ss_pred             CCCCCccCCCE--EEEEecCCCce---eEEEEcCccCccceeEeeeeecccccccccccccceeeeeeeccccccceeEE
Confidence            89999997654  56889887664   4789999998766 588999755544433334445666667899999999999


Q ss_pred             EEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcc
Q psy13120        254 LTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVF  290 (384)
Q Consensus       254 l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f  290 (384)
                      |.|+|+|+++++      .+++++|+|.|+||++|..
T Consensus        76 l~V~a~D~G~p~------~~~tv~V~V~Dc~dn~~~c  106 (107)
T d1l3wa5          76 IYVLLSDAQNNP------QLTVVNATVCSCEGKAIKC  106 (107)
T ss_dssp             CEEECCSSSCCC------EEEECCEEECSCSSSCCCC
T ss_pred             EEEEEEeCCCCc------eEEEEEEEEEEeeCCcCcc
Confidence            999999999875      3678999999999999864

>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.57  E-value=6.1e-15  Score=108.94  Aligned_cols=90  Identities=22%  Similarity=0.281  Sum_probs=80.3

Q ss_pred             eeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC-----CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCC
Q psy13120         83 ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE-----ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRG  157 (384)
Q Consensus        83 ~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~  157 (384)
                      ...|+||.+ |.....+.+.|.|.+.++.++|+|.++.     .+.|.|++.+|.|++.++||||....|.|+|.|+|.|
T Consensus         6 ~i~v~EN~~-~~~~~~v~~~~~D~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~I~~~~~lDrE~~~~y~l~V~a~D~g   84 (100)
T d1l3wa1           6 PIKVSENER-GPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSEN   84 (100)
T ss_dssp             CEEEESSCC-SSSCEEEEECCCSGGGSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESS
T ss_pred             CEEEeCCCC-CCCCEEEEEEECCCCCCCcEEEEEEeCCCCCCccccEEEeCCCCEEEEeeecccccCCEEEEEEEEEECC
Confidence            467999975 5566788888999988999999998763     3569999999999999999999999999999999999


Q ss_pred             CCCCceeEEEEEEecc
Q psy13120        158 EPSKSSRTKFFIRLLD  173 (384)
Q Consensus       158 ~~~~~~~~~v~I~V~d  173 (384)
                      +|++++.+.++|+|.|
T Consensus        85 ~~~~~~~~~v~I~V~D  100 (100)
T d1l3wa1          85 GSPVEEPMEITINVID  100 (100)
T ss_dssp             SCBCSCCEEEEEEEEC
T ss_pred             CCcEEeEEEEEEEEeC
Confidence            9999999999999986

>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=5.1e-15  Score=109.67  Aligned_cols=91  Identities=25%  Similarity=0.409  Sum_probs=80.3

Q ss_pred             ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC-----CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeC
Q psy13120         82 NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE-----ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDR  156 (384)
Q Consensus        82 ~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~  156 (384)
                      ..+.|+||.+ |..+..+.+.|.|.+.++.+.|+|.+..     .+.|.|++.+|.|+++++||||....|.|.|.|+|.
T Consensus         7 ~~v~V~EN~~-~~~~~~i~~~d~D~~~n~~v~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~   85 (102)
T d1ncia_           7 PPINLPENSR-GPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDI   85 (102)
T ss_dssp             CCEEEETTCC-CCSSEEEEECCBGGGGTSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECT
T ss_pred             CCEEEeCCCC-CCEeEEEEEEeCCCCCCceEEEEEecCCCCCCcccceeccCCCCcEEEeeecchhcCcceEEEEEEEEC
Confidence            4567999987 5566678888999888889999998642     457999999999999999999999999999999999


Q ss_pred             CCCCCceeEEEEEEecc
Q psy13120        157 GEPSKSSRTKFFIRLLD  173 (384)
Q Consensus       157 ~~~~~~~~~~v~I~V~d  173 (384)
                      +++++++.+++.|.|.|
T Consensus        86 g~~~~~~~~~v~I~V~D  102 (102)
T d1ncia_          86 NGNQVENPIDIVINVID  102 (102)
T ss_dssp             TSCBSSCCEEEEEEEEC
T ss_pred             CCCceeeeEEEEEEEeC
Confidence            99999999999999986

>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: N-cadherin (neural)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.52  E-value=2.2e-14  Score=106.13  Aligned_cols=91  Identities=23%  Similarity=0.281  Sum_probs=77.9

Q ss_pred             EEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeC----CCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECC
Q psy13120        187 SASVPENISVGATVLQVSATDLDDGINGRVRYTIISG----DDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCG  262 (384)
Q Consensus       187 ~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~  262 (384)
                      .++|+||.+ |..+..+.+.|.|.+.+..+.|+|.++    +..+.|.|++.+|.|++.++||||....|.|+|.|+|.+
T Consensus         8 ~v~V~EN~~-~~~~~~i~~~d~D~~~n~~v~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g   86 (102)
T d1ncia_           8 PINLPENSR-GPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN   86 (102)
T ss_dssp             CEEEETTCC-CCSSEEEEECCBGGGGTSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECTT
T ss_pred             CEEEeCCCC-CCEeEEEEEEeCCCCCCceEEEEEecCCCCCCcccceeccCCCCcEEEeeecchhcCcceEEEEEEEECC
Confidence            367999987 555667888888888888999999853    335689999999999999999999999999999999988


Q ss_pred             CCCcceeeeeEEEEEEEEee
Q psy13120        263 GDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       263 ~~~~~~~~~~~~~v~i~V~d  282 (384)
                      ++..    ++.++|.|.|.|
T Consensus        87 ~~~~----~~~~~v~I~V~D  102 (102)
T d1ncia_          87 GNQV----ENPIDIVINVID  102 (102)
T ss_dssp             SCBS----SCCEEEEEEEEC
T ss_pred             CCce----eeeEEEEEEEeC
Confidence            8765    678999999986

>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed frog (Xenopus laevis) [TaxId: 8355]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Cadherin
domain: C-cadherin ectodomain
species: African clawed frog (Xenopus laevis) [TaxId: 8355]

Probab=99.51  E-value=4.9e-14  Score=103.95  Aligned_cols=90  Identities=20%  Similarity=0.255  Sum_probs=78.2

Q ss_pred             EEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCC----CCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCC
Q psy13120        188 ASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDD----NHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGG  263 (384)
Q Consensus       188 ~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~----~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~  263 (384)
                      +.|+||.+ +.....+.+.|.|.+.++.+.|+|.+++.    .+.|.|++.+|.|++.++||||....|.|+|.|+|.++
T Consensus         7 i~v~EN~~-~~~~~~v~~~~~D~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~I~~~~~lDrE~~~~y~l~V~a~D~g~   85 (100)
T d1l3wa1           7 IKVSENER-GPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENG   85 (100)
T ss_dssp             EEEESSCC-SSSCEEEEECCCSGGGSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSS
T ss_pred             EEEeCCCC-CCCCEEEEEEECCCCCCCcEEEEEEeCCCCCCccccEEEeCCCCEEEEeeecccccCCEEEEEEEEEECCC
Confidence            67999974 55667788889898888999999986543    35699999999999999999999999999999999998


Q ss_pred             CCcceeeeeEEEEEEEEee
Q psy13120        264 DTEERIRFDTATVSILVSD  282 (384)
Q Consensus       264 ~~~~~~~~~~~~v~i~V~d  282 (384)
                      ++.    ++.+.|+|+|.|
T Consensus        86 ~~~----~~~~~v~I~V~D  100 (100)
T d1l3wa1          86 SPV----EEPMEITINVID  100 (100)
T ss_dssp             CBC----SCCEEEEEEEEC
T ss_pred             CcE----EeEEEEEEEEeC
Confidence            875    788999999986

>d1u2ca1 b.1.6.2 (A:58-160) Dystroglycan, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Dystroglycan, N-terminal domain
domain: Dystroglycan, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.84  E-value=0.053  Score=38.05  Aligned_cols=67  Identities=12%  Similarity=0.085  Sum_probs=43.9

Q ss_pred             CccEEEEEEeCC---CCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEe
Q psy13120          2 NGRLEYSIVSGD---DEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRD   70 (384)
Q Consensus         2 ~~~i~Y~i~~~~---~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~d   70 (384)
                      +..++|++...+   -+.|.++|+.+|.|+-...  .+....|.++|+|+|.++.......+...+.|.|..
T Consensus        30 ~d~~t~~~~~~~g~~LPsWl~fd~~tg~~~GtP~--~~~~G~~~i~vtAtD~~~~~s~~~~~~dvf~i~V~P   99 (103)
T d1u2ca1          30 SSGEIIKVSAAGKEALPSWLHWDPHSHILEGLPL--DTDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYP   99 (103)
T ss_dssp             CTTEEEEEEETTSSSCCTTEEEETTTTEEEECCC--GGGCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEES
T ss_pred             CCccEEEEEecCCCCCCccEEEeccCCEEEEccC--CCCceEEEEEEEEEeCCCCcccccEEEEEEEEEeCC
Confidence            345788886432   2479999999999987543  334678999999999876422222333344555443

>d1u2ca1 b.1.6.2 (A:58-160) Dystroglycan, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Cadherin-like
family: Dystroglycan, N-terminal domain
domain: Dystroglycan, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.48  E-value=0.53  Score=32.61  Aligned_cols=65  Identities=12%  Similarity=-0.001  Sum_probs=42.6

Q ss_pred             eEEEEEEeC---CCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120        215 RVRYTIISG---DDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD  282 (384)
Q Consensus       215 ~i~y~i~~~---~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d  282 (384)
                      .++|++..-   ..+.|..+++.+|.+.-...  .+..+.|.++|+|+|.++..... ......+.|+|..
T Consensus        32 ~~t~~~~~~~g~~LPsWl~fd~~tg~~~GtP~--~~~~G~~~i~vtAtD~~~~~s~~-~~~~dvf~i~V~P   99 (103)
T d1u2ca1          32 GEIIKVSAAGKEALPSWLHWDPHSHILEGLPL--DTDKGVHYISVSAARLGANGSHV-PQTSSVFSIEVYP   99 (103)
T ss_dssp             TEEEEEEETTSSSCCTTEEEETTTTEEEECCC--GGGCEEEEEEEEEEEECTTSCEE-EEEEEEEEEEEES
T ss_pred             ccEEEEEecCCCCCCccEEEeccCCEEEEccC--CCCceEEEEEEEEEeCCCCcccc-cEEEEEEEEEeCC
Confidence            367777532   34789999999999987543  34568999999999977654211 1233344555543