Psyllid ID: psy13123

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
AREIRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHHHHHcccccccccccccccccccccHHHHHHHcccccccccccccccccccccHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHcHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
areirprdplatttsayqcgecgkqftrkfSLNAHLHvhygssnykcplcgkFFIQLCHMKdhiqahgglkpyvctyCGKAFVRASDLKRHIDAHLGVKKFACETcgklfsskhglkyhvrthkgeckr
Flexible Loop (DISEMBL)
areirprdplatttsayqcgECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKlfsskhglkyhvrthkgeckr
Low Complexity Region (SEG)
AREIRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR
Disordered region (IsUnstruct)
**************SAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVR********
Disordered Region (DISOPRED)
*REIRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE***
Disordered Region (DISEMBL)
************TTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHV*********
Disordered Region (DISPRO)
*REIRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKG*CK*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
AREIRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	129	2.2.26 [Sep-21-2011]
Q3ZCX4	644	Zinc finger protein 568 O	yes	N/A	0.891	0.178	0.452	2e-23
Q9Y2H8	683	Zinc finger protein 510 O	no	N/A	0.821	0.155	0.443	8e-23
Q9BR84	538	Zinc finger protein 559 O	no	N/A	0.674	0.161	0.452	1e-22
Q32M78	642	Zinc finger protein 699 O	no	N/A	0.821	0.165	0.472	1e-22
Q02386	682	Zinc finger protein 45 OS	no	N/A	0.883	0.167	0.469	2e-22
P10076	861	Zinc finger protein 26 OS	no	N/A	0.682	0.102	0.452	2e-22
Q80YP6	463	Zinc finger protein inter	no	N/A	0.852	0.237	0.454	2e-22
Q2TA17	619	Zinc finger protein 668 O	no	N/A	0.891	0.185	0.426	2e-22
P51814	821	Zinc finger protein 41 OS	no	N/A	0.806	0.126	0.463	2e-22
Q8K2R5	619	Zinc finger protein 668 O	no	N/A	0.891	0.185	0.426	3e-22

>sp|Q3ZCX4|ZN568_HUMAN Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 PE=2 SV=2

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 66/115 (57%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T    Y+C ECGK F+RK +L  H  +H G   Y+C  CGK FIQ+ ++  H + H G K
Sbjct: 441 TAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEK 500

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           PY CT CGKAF + S+L  H   H G K + C  CGK FS +  L  H + H GE
Sbjct: 501 PYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGE 555

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q9Y2H8|ZN510_HUMAN Zinc finger protein 510 OS=Homo sapiens GN=ZNF510 PE=2 SV=1

 Score =  105 bits (262), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 65/115 (56%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T    ++C ECGK F++K  L+ H  +H     YKC  CGK F+Q   ++ H + H G K
Sbjct: 427 TGEKPFECSECGKTFSQKSHLSTHQRIHTAEKPYKCNECGKTFVQKSTLRGHQRIHTGEK 486

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           PY C+ CGK FV+ S L+ H   H G K F C  CGK F  K  L+ H RTH GE
Sbjct: 487 PYECSECGKTFVQKSTLRDHHRIHTGEKSFQCNQCGKTFGQKSNLRIHQRTHTGE 541

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9BR84|ZN559_HUMAN Zinc finger protein 559 OS=Homo sapiens GN=ZNF559 PE=2 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 62/115 (53%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T    Y+C ECGK F     L  H+  H G   Y+C  CGK FI     K H+Q H G+K
Sbjct: 348 TGEKPYECKECGKAFANSSHLTVHMRTHTGEKPYQCKECGKAFINSSSFKSHMQTHPGVK 407

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           PY C  CGKAF+R+S L RH+ +H   + F CE CGK F     L  H R H GE
Sbjct: 408 PYDCQQCGKAFIRSSFLIRHLRSHSAERPFECEECGKAFRYSSHLSQHKRIHTGE 462

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q32M78|ZN699_HUMAN Zinc finger protein 699 OS=Homo sapiens GN=ZNF699 PE=2 SV=1

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 62/110 (56%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
           Y+C ECGK F+R  SL  HL  H G   Y+C  CGK FI   H+  HI+ H G KPY C 
Sbjct: 475 YECKECGKTFSRSSSLTEHLRTHSGEKPYECKECGKAFISSSHLTVHIRTHTGEKPYECK 534

Query: 77  YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
            CGKAF+  S L+ H+  H G K + C+ CGK F     L  H R H GE
Sbjct: 535 KCGKAFIYPSALRIHMRTHTGEKPYECKECGKAFRHSSYLTVHARMHTGE 584

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q02386|ZNF45_HUMAN Zinc finger protein 45 OS=Homo sapiens GN=ZNF45 PE=2 SV=2

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 61/115 (53%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T    YQC  CGK F+R    N H  VH G   YKC  CGK F Q  ++  H + H G K
Sbjct: 411 TGEKPYQCDACGKGFSRSSDFNIHFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEK 470

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           PY C  CGK F R+SDL  H   H G K + CE CGK FS    L+ H R H GE
Sbjct: 471 PYKCGTCGKGFSRSSDLNVHCRIHTGEKPYKCERCGKAFSQFSSLQVHQRVHTGE 525

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 64/115 (55%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T    Y C ECGK FT + SL  HL  H    +Y+C  CGK FIQ   + +H+++H G K
Sbjct: 269 TVEKPYDCKECGKAFTERSSLIVHLRQHTREKSYECKECGKTFIQPSRLTEHMRSHTGEK 328

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           PY C  CG AF  +S L  H+  H G K F C  CGK F+    L  H+RTH GE
Sbjct: 329 PYQCDQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLGHIRTHTGE 383

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q80YP6|ZIK1_MOUSE Zinc finger protein interacting with ribonucleoprotein K OS=Mus musculus GN=Zik1 PE=1 SV=1

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 63/110 (57%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
           Y+C +CGK F  K+SL+ H  VH G   ++C  CGKFF Q  H+ DH + H G +PY C+
Sbjct: 215 YECSKCGKTFRGKYSLDQHQRVHTGERPWECRDCGKFFSQTSHLNDHRRIHTGERPYECS 274

Query: 77  YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
            CGK F + S L  H   H G + + C  CGK FS K  L  H R H GE
Sbjct: 275 ECGKLFRQNSSLVDHQKTHTGARPYECSQCGKSFSQKATLVKHKRVHTGE 324

May be a transcriptional repressor.

Mus musculus (taxid: 10090)

>sp|Q2TA17|ZN668_BOVIN Zinc finger protein 668 OS=Bos taurus GN=ZNF668 PE=2 SV=2

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 61/115 (53%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T    + C ECGK F+R  SL  H  +H     Y+CP CGK F QL   + H + H G K
Sbjct: 219 TGERPFLCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEK 278

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           P++C  CG+ F   S  +RH  AH GVK + CE CGK F     L  H R H G+
Sbjct: 279 PFLCPRCGRMFSDPSSFRRHQRAHEGVKPYRCEKCGKDFRQPADLAMHRRVHTGD 333

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|P51814|ZNF41_HUMAN Zinc finger protein 41 OS=Homo sapiens GN=ZNF41 PE=1 SV=2

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 63/110 (57%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
           Y+C ECGK FTRK +L  H  +H G   Y C  CGK FIQ  H   H + H G KPY C+
Sbjct: 453 YECNECGKAFTRKSALRMHQRIHTGEKPYVCADCGKAFIQKSHFNTHQRIHTGEKPYECS 512

Query: 77  YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
            CGK+F + S L  H   H G K + C  CGK+F+ +  L  H +TH GE
Sbjct: 513 DCGKSFTKKSQLHVHQRIHTGEKPYICTECGKVFTHRTNLTTHQKTHTGE 562

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8K2R5|ZN668_MOUSE Zinc finger protein 668 OS=Mus musculus GN=Znf668 PE=2 SV=1

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 61/115 (53%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T    + C ECGK F+R  SL  H  +H     Y+CP CGK F QL   + H + H G K
Sbjct: 219 TGERPFLCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEK 278

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           P++C  CG+ F   S  +RH  AH GVK + CE CGK F     L  H R H G+
Sbjct: 279 PFLCPRCGRMFSDPSSFRRHQRAHEGVKPYRCEKCGKDFRQPADLAMHRRVHTGD 333

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
357624009	404	putative KRAB box and zinc finger C2H2 t	0.899	0.287	0.456	2e-24
189532217	488	PREDICTED: zinc finger protein 850-like	0.899	0.237	0.474	2e-23
348542258	581	PREDICTED: zinc finger protein 665-like	0.837	0.185	0.481	4e-23
345787217	479	PREDICTED: zinc finger protein 846 [Cani	0.891	0.240	0.469	5e-23
203097452	604	zinc finger protein 426-like [Mus muscul	0.860	0.183	0.478	5e-23
203097404	604	zinc finger protein 426-like [Rattus nor	0.860	0.183	0.478	6e-23
405950372	592	Histone-lysine N-methyltransferase PRDM9	0.891	0.194	0.434	6e-23
260800867	368	hypothetical protein BRAFLDRAFT_59776 [B	0.875	0.307	0.469	9e-23
260795687	945	hypothetical protein BRAFLDRAFT_65421 [B	0.519	0.070	0.459	1e-22
301626399	2034	PREDICTED: hypothetical protein LOC10049	0.875	0.055	0.434	1e-22

>gi|357624009|gb|EHJ74935.1| putative KRAB box and zinc finger C2H2 type domain containing protein [Danaus plexippus]

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 75/116 (64%)

Query: 10  LATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGG 69
           L +T+  +QC +C K +TR+  L AH+ +H G   Y CP C K F QLC +KDH++ H G
Sbjct: 128 LHSTSKPFQCTKCSKCYTRQDQLAAHMRIHDGYKPYACPHCSKAFSQLCSLKDHVRTHTG 187

Query: 70  LKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKG 125
             P++C+ CGK F  +S+L++H+  H GVK FAC  C K FS+K  +K H+ TH G
Sbjct: 188 ETPFLCSQCGKGFANSSNLRQHLRRHTGVKPFACSLCPKTFSTKGQMKQHIDTHTG 243

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189532217|ref|XP_001344185.2| PREDICTED: zinc finger protein 850-like [Danio rerio]

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 2/118 (1%)

Query: 10  LATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFF-IQLCHMKDHIQAHG 68
           + T    Y C ECGK+FT K +L+ HL +H G   Y CP CGK F ++ C +++HI+ H 
Sbjct: 140 IHTGEKPYTCQECGKRFTEKQTLDKHLTIHTGEKPYSCPECGKSFRVKFC-LENHIKIHT 198

Query: 69  GLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           G KPY C  CGK+F    +L+RH+  H G K FAC  CG+ F  K  LK HVR H GE
Sbjct: 199 GEKPYTCQECGKSFTEKQNLERHMRIHTGEKPFACPECGRSFRVKQDLKSHVRIHTGE 256

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348542258|ref|XP_003458602.1| PREDICTED: zinc finger protein 665-like [Oreochromis niloticus]

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 65/108 (60%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
           Y C  CGK FT K  LNAH+ VH G   Y C  CGK FI    +  H++ H G KPY C+
Sbjct: 365 YSCSTCGKVFTHKSGLNAHIRVHTGEKPYSCSTCGKTFILKSQLTTHVRVHTGEKPYSCS 424

Query: 77  YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHK 124
            CGK F +  ++KRH+  H G K ++C TCGK FS K GLK H  +H+
Sbjct: 425 TCGKEFSQWMNMKRHMRCHTGEKPYSCSTCGKRFSQKSGLKVHTNSHR 472

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|345787217|ref|XP_542085.3| PREDICTED: zinc finger protein 846 [Canis lupus familiaris]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 67/115 (58%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T    Y+C ECGK FTR   L  H+ +H G   Y+C  CGK FI   ++  HI+ H G K
Sbjct: 250 TGEKPYECKECGKAFTRSTGLILHMRIHTGEKPYECKECGKAFIHSSYLTKHIRIHSGEK 309

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           PYVC  CGK F R+S L  H+  H G K + C+ CGK F++   L  HVRTH GE
Sbjct: 310 PYVCKECGKTFTRSSGLVLHVRTHTGEKPYVCKECGKAFNNSSMLNQHVRTHTGE 364

Source: Canis lupus familiaris

Species: Canis lupus

Genus: Canis

Family: Canidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|203097452|ref|NP_001075954.1| zinc finger protein 426-like [Mus musculus] gi|203097500|ref|NP_001128491.1| zinc finger protein 426-like [Mus musculus]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 69/115 (60%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T   +Y+C ECGK F R   L  H+ VH G   Y+C  CGK F +   + +HI+ H G+K
Sbjct: 394 TGIKSYKCMECGKAFLRWSGLTEHIRVHTGEKPYECKECGKTFSRSTQLTEHIRTHTGIK 453

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           PY C  CGKAF + S L  H+  H G K FAC+ CGK F+   GL +HVRTH GE
Sbjct: 454 PYECKECGKAFTQYSGLATHVRIHSGEKPFACKECGKAFTRTSGLIHHVRTHTGE 508

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|203097404|ref|NP_001128490.1| zinc finger protein 426-like [Rattus norvegicus]

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 69/115 (60%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T   +Y+C ECGK F R   L  H+ VH G   Y+C  CGK F +   + +HI+ H G+K
Sbjct: 394 TGIKSYKCMECGKAFLRWSGLTEHIRVHTGEKPYECKECGKTFSRSTQLTEHIRTHTGIK 453

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           PY C  CGKAF + S L  H+  H G K FAC+ CGK F+   GL +HVRTH GE
Sbjct: 454 PYECKECGKAFTQYSGLATHVRIHSGEKPFACKECGKAFTRTSGLIHHVRTHTGE 508

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|405950372|gb|EKC18365.1| Histone-lysine N-methyltransferase PRDM9 [Crassostrea gigas]

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 69/115 (60%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T    Y+C  CGK F +   L  H+ +H G   YKC +CGK F Q+ H++ H++ H G K
Sbjct: 451 TGEKPYKCDVCGKAFNQSADLQKHMRIHTGEKPYKCDMCGKAFNQIPHLQTHMRTHTGEK 510

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           PY C  CGKAF +++DL++H+  H G K + C  CGK F+    L+ H RTH GE
Sbjct: 511 PYKCDVCGKAFNQSADLQKHMRIHTGEKPYKCNMCGKAFNQSQSLQAHKRTHTGE 565

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|260800867|ref|XP_002595318.1| hypothetical protein BRAFLDRAFT_59776 [Branchiostoma floridae] gi|229280563|gb|EEN51330.1| hypothetical protein BRAFLDRAFT_59776 [Branchiostoma floridae]

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 70/115 (60%)

Query: 12  TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
           T  + Y+C  C KQF++  +L  H+  H G   Y+C  CGK FIQLC++KDH++ H G +
Sbjct: 84  TGENPYRCEACCKQFSKLGTLKIHMRTHTGKRPYQCDECGKRFIQLCNLKDHMRTHTGER 143

Query: 72  PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           PY C YC K F R+S LK H+  H G   + CE C K FS    LK H+RTH GE
Sbjct: 144 PYECEYCNKCFTRSSHLKAHVRTHTGENPYRCEACCKQFSVLSSLKKHMRTHTGE 198

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260795687|ref|XP_002592836.1| hypothetical protein BRAFLDRAFT_65421 [Branchiostoma floridae] gi|229278060|gb|EEN48847.1| hypothetical protein BRAFLDRAFT_65421 [Branchiostoma floridae]

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 67/111 (60%)

Query: 16  AYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVC 75
            Y+C EC KQF+R  +L  H+  H G   Y+C  C + F QL H+K+H++ H G KPY C
Sbjct: 439 PYRCEECNKQFSRLDNLKTHVRTHTGEKPYRCEECSRQFSQLGHLKEHMRTHTGEKPYRC 498

Query: 76  TYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             C + F + SDLK+H+  H G K + CE C K FS    LK H+RTH GE
Sbjct: 499 EECSRQFSQPSDLKKHMRTHTGEKPYKCEECSKQFSQPGDLKSHMRTHTGE 549

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301626399|ref|XP_002942387.1| PREDICTED: hypothetical protein LOC100493142 [Xenopus (Silurana) tropicalis]

 Score =  110 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/115 (43%), Positives = 64/115 (55%)

Query: 12   TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
            T    + C ECGK F +K  L +H+ +H G   + C  CGK F    H+  HI+ H G K
Sbjct: 1413 TGEKPFTCTECGKSFAQKNVLVSHMKIHTGEKPFTCTECGKGFAHKNHLVSHIKIHKGEK 1472

Query: 72   PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
            P+ CT CGK F R + L  HI  H G K F C  CGK F+ K+ L  H++ HKGE
Sbjct: 1473 PFTCTECGKGFARKNHLVSHIKIHTGEKPFTCTECGKGFAHKNHLVSHIKIHKGE 1527

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
UNIPROTKB|J9P1U3	234	ZNF846 "Uncharacterized protei	0.891	0.491	0.469	2.2e-27
ZFIN|ZDB-GENE-120214-31	488	si:ch73-367f21.6 "si:ch73-367f	0.883	0.233	0.482	3.6e-27
ZFIN|ZDB-GENE-110913-126	346	si:dkeyp-4f2.5 "si:dkeyp-4f2.5	0.891	0.332	0.452	5.7e-27
UNIPROTKB|F1MAL0	604	Zfp426l "Protein Zfp426l" [Rat	0.891	0.190	0.478	1.6e-26
ZFIN|ZDB-GENE-110914-101	247	si:dkey-82i20.5 "si:dkey-82i20	0.852	0.445	0.454	4e-26
ZFIN|ZDB-GENE-110914-69	192	si:ch211-79g12.1 "si:ch211-79g	0.852	0.572	0.463	4e-26
ZFIN|ZDB-GENE-110913-105	321	si:dkey-57k17.1 "si:dkey-57k17	0.891	0.358	0.443	5.2e-26
ZFIN|ZDB-GENE-110914-70	392	si:ch211-234c11.2 "si:ch211-23	0.891	0.293	0.426	1.1e-25
ZFIN|ZDB-GENE-110913-123	429	si:dkey-14o6.4 "si:dkey-14o6.4	0.891	0.268	0.426	1.1e-25
ZFIN|ZDB-GENE-030131-7869	367	si:rp71-1h20.5 "si:rp71-1h20.5	0.891	0.313	0.443	1.4e-25

UNIPROTKB|J9P1U3 ZNF846 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 54/115 (46%), Positives = 67/115 (58%)

Query:    12 TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
             T    Y+C ECGK FTR   L  H+ +H G   Y+C  CGK FI   ++  HI+ H G K
Sbjct:     5 TGEKPYECKECGKAFTRSTGLILHMRIHTGEKPYECKECGKAFIHSSYLTKHIRIHSGEK 64

Query:    72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             PYVC  CGK F R+S L  H+  H G K + C+ CGK F++   L  HVRTH GE
Sbjct:    65 PYVCKECGKTFTRSSGLVLHVRTHTGEKPYVCKECGKAFNNSSMLNQHVRTHTGE 119

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-120214-31 si:ch73-367f21.6 "si:ch73-367f21.6" [Danio rerio (taxid:7955)]

 Score = 308 (113.5 bits), Expect = 3.6e-27, P = 3.6e-27
 Identities = 56/116 (48%), Positives = 71/116 (61%)

Query:    12 TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFF-IQLCHMKDHIQAHGGL 70
             T    Y C ECGK+FT K +L+ HL +H G   Y CP CGK F ++ C +++HI+ H G 
Sbjct:   142 TGEKPYTCQECGKRFTEKQTLDKHLTIHTGEKPYSCPECGKSFRVKFC-LENHIKIHTGE 200

Query:    71 KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             KPY C  CGK+F    +L+RH+  H G K FAC  CG+ F  K  LK HVR H GE
Sbjct:   201 KPYTCQECGKSFTEKQNLERHMRIHTGEKPFACPECGRSFRVKQDLKSHVRIHTGE 256

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-126 si:dkeyp-4f2.5 "si:dkeyp-4f2.5" [Danio rerio (taxid:7955)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 52/115 (45%), Positives = 68/115 (59%)

Query:    12 TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
             T    + C +CGK F+   SLN H+ +H G   + CP CGK FI   H+K HI  H G K
Sbjct:   228 TGEKPFTCTQCGKSFSHSSSLNLHMRIHTGEKPFTCPQCGKSFIHSSHLKQHIMIHTGEK 287

Query:    72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             P+ CT CGK+F  +S LK+H+  H GV++F C  C K F +  GLK H R H G+
Sbjct:   288 PFTCTQCGKSFSTSSHLKQHMKIHTGVREFMCLECEKTFITAAGLKRHQRIHTGD 342

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MAL0 Zfp426l "Protein Zfp426l" [Rattus norvegicus (taxid:10116)]

 Score = 306 (112.8 bits), Expect = 1.6e-26, P = 1.6e-26
 Identities = 55/115 (47%), Positives = 69/115 (60%)

Query:    12 TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
             T   +Y+C ECGK F R   L  H+ VH G   Y+C  CGK F +   + +HI+ H G+K
Sbjct:   394 TGIKSYKCMECGKAFLRWSGLTEHIRVHTGEKPYECKECGKTFSRSTQLTEHIRTHTGIK 453

Query:    72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             PY C  CGKAF + S L  H+  H G K FAC+ CGK F+   GL +HVRTH GE
Sbjct:   454 PYECKECGKAFTQYSGLATHVRIHSGEKPFACKECGKAFTRTSGLIHHVRTHTGE 508

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-110914-101 si:dkey-82i20.5 "si:dkey-82i20.5" [Danio rerio (taxid:7955)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 50/110 (45%), Positives = 67/110 (60%)

Query:    17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
             + C +CGK   RK +L  H+ +H G   Y C  CGK FI+  H+ +H++ H G KP+ CT
Sbjct:    66 FTCTQCGKSLGRKDNLKIHMRIHTGEKPYACTQCGKSFIRSSHLNEHMRIHTGEKPFTCT 125

Query:    77 YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              CGK+F  +S LK+H+  H G K FAC  CGK FS    L +H+R H GE
Sbjct:   126 QCGKSFSCSSHLKQHMIIHTGEKPFACTQCGKSFSRSSSLNHHMRIHTGE 175

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110914-69 si:ch211-79g12.1 "si:ch211-79g12.1" [Danio rerio (taxid:7955)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 51/110 (46%), Positives = 67/110 (60%)

Query:    17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
             + C +CGK F RK +L  H+ +H G   Y C  CGK FI+  H+K H++ H G KP+ CT
Sbjct:    66 FTCTQCGKCFGRKDNLKIHMMIHTGEKPYACTQCGKSFIRSSHLKQHMRIHTGEKPFACT 125

Query:    77 YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              CGK+F  +S LK+H+  H G+K F C  CGK FS    L  H+R H GE
Sbjct:   126 QCGKSFSCSSHLKQHMRIHTGLKPFTCTQCGKSFSCSSSLNEHMRIHTGE 175

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-105 si:dkey-57k17.1 "si:dkey-57k17.1" [Danio rerio (taxid:7955)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 51/115 (44%), Positives = 66/115 (57%)

Query:    12 TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
             T    + C +CGK F++  S N HL +H G   + C  CGK F  L H+  H++ H G K
Sbjct:   201 TGEKPFTCTQCGKSFSQSSSRNLHLRIHTGEKPFTCTQCGKSFNCLSHLNKHMRIHTGEK 260

Query:    72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             P+ CT CGK+F  +SDL RH+  H G K F C  CGK FS    L +H+R H GE
Sbjct:   261 PFTCTQCGKSFSCSSDLNRHMRIHTGEKPFTCTQCGKSFSQSSSLNHHMRIHTGE 315

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110914-70 si:ch211-234c11.2 "si:ch211-234c11.2" [Danio rerio (taxid:7955)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 49/115 (42%), Positives = 63/115 (54%)

Query:    12 TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
             T    + C +CGK F+   SLN H+ +H G   + CP CGK FI   H+  HI  H G K
Sbjct:   145 TGEKPFTCTQCGKSFSHSSSLNQHMRIHTGEKPFTCPQCGKSFINSSHLNQHIMIHTGEK 204

Query:    72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             P+ CT CGK+F  +S L +H+  H G K F C  CGK FS    L  H+  H G+
Sbjct:   205 PFTCTQCGKSFNCSSSLNKHMRIHTGEKPFTCTQCGKSFSQSSSLNQHIMIHTGK 259

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-123 si:dkey-14o6.4 "si:dkey-14o6.4" [Danio rerio (taxid:7955)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 49/115 (42%), Positives = 63/115 (54%)

Query:    12 TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
             T    + C +CGK F+   SLN H+ +H G   + CP CGK FI   H+  HI  H G K
Sbjct:   201 TGEKPFTCTQCGKSFSHSSSLNQHMRIHTGEKPFTCPQCGKSFINSSHLNQHIMIHTGEK 260

Query:    72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             P+ CT CGK+F  +S L +H+  H G K F C  CGK FS    L  H+  H G+
Sbjct:   261 PFTCTQCGKSFNCSSSLNKHMRIHTGEKPFTCTQCGKSFSQSSSLNQHIMIHTGK 315

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-030131-7869 si:rp71-1h20.5 "si:rp71-1h20.5" [Danio rerio (taxid:7955)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 51/115 (44%), Positives = 64/115 (55%)

Query:    12 TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
             T    + C ECGK F  K  LN HLH H    ++ C  CGK F+   +++ H++ H G+K
Sbjct:   194 TEDKPFACAECGKSFKYKSVLNNHLHTHAEVKSFSCDQCGKSFVCASNLRTHLKVHTGVK 253

Query:    72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             PY+C +CGK F+  S LK H   H GVK  AC  CGK F     LK H R H GE
Sbjct:   254 PYICAFCGKKFLHMSYLKLHQHTHTGVKPHACSVCGKSFGLLSNLKKHQRIHTGE 308

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	129
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	0.001
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	0.002
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	0.003

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 22  CGKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDH--IQAHGGL---KPYV 74
           CGK F+R  +L  H+ +H   S  K  L      F  L + +    +Q +  L   K   
Sbjct: 329 CGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSE 388

Query: 75  CTY--CGKAFVRASDLKRHIDAHLGV--KKFACETCGKLFSSKHGLKYHVRTHK 124
                C + F R S+L  HI  HL           C K F+  + L  H + H 
Sbjct: 389 TLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHT 442

Length = 467

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 44 NYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAH 95
             CP C   F +L H+  HI++H G KP  C+Y  C K+F R  +L RH+  H
Sbjct: 33 PDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTH 86

Length = 467

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 24/113 (21%), Positives = 38/113 (33%), Gaps = 20/113 (17%)

Query: 21  ECGKQFTRKFSLNAHLHVHYGSSN--------YKCPL--CGKFFIQLCHMKDHIQAHGGL 70
                   K +     ++   S          YKCP+  C K +     +K H   HG  
Sbjct: 318 CTNSSSNGKLAHGGERNIDTPSRMLKVKDGKPYKCPVEGCNKKYKNQNGLKYH-MLHG-- 374

Query: 71  KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
                 +  +        ++        K + CE C K + + +GLKYH R H
Sbjct: 375 ------HQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYH-RKH 420

Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	129
KOG2462|consensus	279		99.97
KOG2462|consensus	279		99.97
KOG3576|consensus	267		99.83
KOG1074|consensus	958		99.8
KOG1074|consensus	958		99.77
KOG3608|consensus	467		99.73
KOG3623|consensus	1007		99.67
KOG3623|consensus	1007		99.62
KOG3608|consensus	467		99.62
KOG3576|consensus	267		99.62
PLN03086	567	PRLI-interacting factor K; Provisional	99.4
PHA00733	128	hypothetical protein	99.38
PHA02768	55	hypothetical protein; Provisional	99.13
PLN03086	567	PRLI-interacting factor K; Provisional	99.05
PHA02768	55	hypothetical protein; Provisional	99.03
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.01
PHA00616	44	hypothetical protein	98.98
PHA00733	128	hypothetical protein	98.96
PHA00616	44	hypothetical protein	98.77
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.7
KOG3993|consensus	500		98.53
PHA00732	79	hypothetical protein	98.48
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.45
KOG3993|consensus	500		98.4
PHA00732	79	hypothetical protein	98.39
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.21
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.17
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.15
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.11
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.03
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.9
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.9
smart00355	26	ZnF_C2H2 zinc finger.	97.89
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.85
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.82
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.66
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.64
smart00355	26	ZnF_C2H2 zinc finger.	97.45
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.38
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.29
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.24
PRK04860	160	hypothetical protein; Provisional	97.24
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.16
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.0
PRK04860	160	hypothetical protein; Provisional	96.98
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.85
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.61
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	96.48
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.1
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.57
KOG1146|consensus	1406		95.43
KOG2893|consensus	341		94.57
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.45
KOG2785|consensus	390		93.99
COG4049	65	Uncharacterized protein containing archaeal-type C	93.75
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.49
KOG2231|consensus	669		93.34
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	92.93
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	92.92
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	91.69
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	91.6
COG5048	467	FOG: Zn-finger [General function prediction only]	91.59
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	91.23
KOG2231|consensus	669		90.68
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	90.22
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	90.05
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	90.03
COG1592	166	Rubrerythrin [Energy production and conversion]	89.5
KOG2482|consensus	423		89.48
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	88.8
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	88.58
KOG1146|consensus	1406		88.46
KOG2186|consensus	276		88.45
COG5048	467	FOG: Zn-finger [General function prediction only]	88.44
smart00531	147	TFIIE Transcription initiation factor IIE.	87.04
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	86.71
KOG2186|consensus	276		86.67
PRK06266	178	transcription initiation factor E subunit alpha; V	86.6
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	86.3
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	86.27
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	85.96
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	85.59
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	85.37
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	85.13
PF13878	41	zf-C2H2_3: zinc-finger of acetyl-transferase ESCO	85.0
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	84.87
KOG2593|consensus	436		84.46
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	84.34
KOG4173|consensus	253		83.68
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	82.74
KOG2482|consensus	423		82.59
COG5236	493	Uncharacterized conserved protein, contains RING Z	82.37
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	81.15
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	80.79

>KOG2462|consensus

Probab=99.97  E-value=4.8e-32  Score=162.69  Aligned_cols=107  Identities=37%  Similarity=0.756  Sum_probs=77.8

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHH
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHID   93 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~   93 (129)
                      .+.+.|+.|++.|.....|..|+++|+  .+..|.+||+.|...+.|+.|+++|+||+||.|+.|+++|.+.++|..|++
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQ  236 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQ  236 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHH
Confidence            445677777777777777777777775  667777777777777777777777777777777777777777777777777


Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHH
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      +|.+.|.|.|..|+|.|...+-|.+|.-.
T Consensus       237 THS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  237 THSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            77777777777777777777777777543

>KOG2462|consensus

Probab=99.97  E-value=7e-31  Score=157.73  Aligned_cols=114  Identities=37%  Similarity=0.777  Sum_probs=106.9

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCC---CCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHH
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYG---SSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKR   90 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~---~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~   90 (129)
                      ..-|.|..||+.+.+.++|.+|.++|-.   .+.+.|..|++.|..-..|..|+++|+  .+.+|.+||+.|..++.|+.
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhc
Confidence            3448999999999999999999999853   567999999999999999999999998  57899999999999999999


Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+|||||.|..|+|+|..+++|+.|++||.+.|+|
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~  244 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKH  244 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccc
Confidence            999999999999999999999999999999999999887

>KOG3576|consensus

Probab=99.83  E-value=2.4e-21  Score=112.38  Aligned_cols=118  Identities=31%  Similarity=0.640  Sum_probs=106.2

Q ss_pred             CCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHH
Q psy13123         11 ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKR   90 (129)
Q Consensus        11 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~   90 (129)
                      -++...|.|..|++.|.....|.+|+..|...+.+.|..||+.|...-+|.+|++.|+|-+||.|..|+++|++.-.|..
T Consensus       112 ssd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  112 SSDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CCCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHH
Confidence            34455699999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcC-----------CCcccCCccccccCCHHHHHHHHHHhcccCC
Q psy13123         91 HIDAHLG-----------VKKFACETCGKLFSSKHGLKYHVRTHKGECK  128 (129)
Q Consensus        91 h~~~~~~-----------~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p  128 (129)
                      |.+.-++           ++.|.|..||.+-.....+..|+..|+..-|
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            9875433           4679999999999999999999998876543

>KOG1074|consensus

Probab=99.80  E-value=9e-21  Score=128.46  Aligned_cols=56  Identities=36%  Similarity=0.669  Sum_probs=53.2

Q ss_pred             eecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCC
Q psy13123         73 YVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECK  128 (129)
Q Consensus        73 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p  128 (129)
                      ..|.+|++.|...++|.+|+++|+++|||.|..|+++|....+|..|+.+|.+..|
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~  935 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQP  935 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCC
Confidence            56999999999999999999999999999999999999999999999999988765

>KOG1074|consensus

Probab=99.77  E-value=5.1e-20  Score=124.88  Aligned_cols=56  Identities=32%  Similarity=0.650  Sum_probs=51.4

Q ss_pred             eecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCC
Q psy13123         73 YVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECK  128 (129)
Q Consensus        73 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p  128 (129)
                      -.|..|.++..-...|+.|.+.|+||+||+|.+||++|..+.+|..|+-+|....|
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~  661 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPP  661 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCcc
Confidence            46999999999999999999999999999999999999999999999999875443

>KOG3608|consensus

Probab=99.73  E-value=3.3e-18  Score=106.82  Aligned_cols=119  Identities=28%  Similarity=0.507  Sum_probs=98.9

Q ss_pred             CCCCCCCCCCCCccccCcchhccCChhhHHHHHHH--hCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeeccccccc
Q psy13123          4 IRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHV--HYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKA   81 (129)
Q Consensus         4 l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~--~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~   81 (129)
                      |..|.++|++++..-|+.||..|..+..|..|.+-  ..+..+|.|..|.+.|.....|..|+..|..  .|.|+.|.-.
T Consensus       195 LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmt  272 (467)
T KOG3608|consen  195 LREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMT  272 (467)
T ss_pred             HHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccC
Confidence            56678888888888888888888888888888653  3355678888888888888888888877664  6889999888


Q ss_pred             ccChhHHHHHHH-HhcCCCcccCCccccccCCHHHHHHHHHHhc
Q psy13123         82 FVRASDLKRHID-AHLGVKKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        82 ~~~~~~l~~h~~-~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      ....+.|..|++ .|..++||+|+.|.+.|...++|.+|+.+|.
T Consensus       273 c~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  273 CSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             CCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            888899999988 4778899999999999999999999999886

>KOG3623|consensus

Probab=99.67  E-value=2.8e-17  Score=110.76  Aligned_cols=79  Identities=34%  Similarity=0.668  Sum_probs=50.1

Q ss_pred             CCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHH
Q psy13123         42 SSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHV  120 (129)
Q Consensus        42 ~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~  120 (129)
                      ...|.|+.|.+.|...++|.+|.-.|+|.+||.|..|.++|...-.|..|++.|.|||||.|+.|+|.|..+..+.+|+
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            3456666666666666666666666666666666666666666666666666666666666666666666666666654

>KOG3623|consensus

Probab=99.62  E-value=2.5e-16  Score=106.24  Aligned_cols=85  Identities=32%  Similarity=0.681  Sum_probs=80.2

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHH
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDL   88 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l   88 (129)
                      ...+.+..|.|.+|+++|...+.|.+|.=.|+|.+||.|.+|.+.|+-+..|..|++.|.|++||.|..|++.|..++..
T Consensus       887 ~~kte~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSY  966 (1007)
T KOG3623|consen  887 HAKTEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSY  966 (1007)
T ss_pred             cccCccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccch
Confidence            44566778999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HHHHH
Q psy13123         89 KRHID   93 (129)
Q Consensus        89 ~~h~~   93 (129)
                      ..||.
T Consensus       967 SQHMN  971 (1007)
T KOG3623|consen  967 SQHMN  971 (1007)
T ss_pred             Hhhhc
Confidence            88875

>KOG3608|consensus

Probab=99.62  E-value=9.8e-16  Score=95.93  Aligned_cols=110  Identities=27%  Similarity=0.546  Sum_probs=99.9

Q ss_pred             ccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhC--CCCCeecccccccccChhHHHHHHHHh
Q psy13123         18 QCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHG--GLKPYVCTYCGKAFVRASDLKRHIDAH   95 (129)
Q Consensus        18 ~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~--~~~~~~c~~c~~~~~~~~~l~~h~~~~   95 (129)
                      .|..|-+.+.++..|.+|++.|++++...|+.||..|.....|..|.+-.+  ..++|.|..|.+.|.....|..|+..|
T Consensus       181 ~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rH  260 (467)
T KOG3608|consen  181 NWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRH  260 (467)
T ss_pred             cchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHh
Confidence            367799999999999999999999999999999999999999999987644  456899999999999999999999988


Q ss_pred             cCCCcccCCccccccCCHHHHHHHHHH-hcccCCC
Q psy13123         96 LGVKKFACETCGKLFSSKHGLKYHVRT-HKGECKR  129 (129)
Q Consensus        96 ~~~~~~~C~~C~~~f~~~~~l~~h~~~-h~~e~p~  129 (129)
                        .+-|+|+.|..+.+..+.|++|++. |..++|+
T Consensus       261 --vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpf  293 (467)
T KOG3608|consen  261 --VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPF  293 (467)
T ss_pred             --hhcccccccccCCCChHHHHHHHHhhhccCCCc
Confidence              4679999999999999999999998 6777774

>KOG3576|consensus

Probab=99.62  E-value=1.1e-16  Score=93.20  Aligned_cols=83  Identities=34%  Similarity=0.764  Sum_probs=78.0

Q ss_pred             CCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHH
Q psy13123         42 SSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVR  121 (129)
Q Consensus        42 ~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~  121 (129)
                      ...+.|..|++.|....-|.+|++.|...+.+.|..||+.|-+.-+|..|.++|+|.+||+|..|+|+|.+.-.|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            45599999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             Hhc
Q psy13123        122 THK  124 (129)
Q Consensus       122 ~h~  124 (129)
                      .-+
T Consensus       195 kvh  197 (267)
T KOG3576|consen  195 KVH  197 (267)
T ss_pred             HHc
Confidence            543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.40  E-value=1.4e-12  Score=87.68  Aligned_cols=102  Identities=23%  Similarity=0.571  Sum_probs=84.1

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccC---------
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVR---------   84 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~---------   84 (129)
                      ++.+.|+.|++.|. ...|..|+..++  .++.|+ |+..+ ....|..|+..+.+.+++.|..|+..+..         
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d  525 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRD  525 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhh
Confidence            44578999999996 678999999875  889999 99754 66889999999999999999999988842         


Q ss_pred             -hhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHH
Q psy13123         85 -ASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus        85 -~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                       ...|..|.... +.+++.|..||+.+... ++..|+..
T Consensus       526 ~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        526 RLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             hhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHH
Confidence             34788888875 88999999999988554 66677665

>PHA00733 hypothetical protein

Probab=99.38  E-value=5.4e-13  Score=74.34  Aligned_cols=83  Identities=20%  Similarity=0.372  Sum_probs=63.4

Q ss_pred             CCCCccCCcchhhhcchhHHHHHH-----HHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHH
Q psy13123         41 GSSNYKCPLCGKFFIQLCHMKDHI-----QAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHG  115 (129)
Q Consensus        41 ~~~~~~c~~c~~~~~~~~~l~~~~-----~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~  115 (129)
                      ..+++.|.+|...+.....|..+.     ....+.++|.|..|++.|.....|..|+..+  +.++.|..|++.|.....
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHH
Confidence            356678888877777666555541     1234467899999999999999998888865  457899999999999999


Q ss_pred             HHHHHHHhcc
Q psy13123        116 LKYHVRTHKG  125 (129)
Q Consensus       116 l~~h~~~h~~  125 (129)
                      |..|+...++
T Consensus       115 L~~H~~~~h~  124 (128)
T PHA00733        115 TLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC
Confidence            9999887654

>PHA02768 hypothetical protein; Provisional

Probab=99.13  E-value=2.4e-11  Score=56.94  Aligned_cols=43  Identities=16%  Similarity=0.517  Sum_probs=34.6

Q ss_pred             CeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHH
Q psy13123         72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGL  116 (129)
Q Consensus        72 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l  116 (129)
                      .|.|+.||+.|...+.|..|+++|+  ++++|..|++.|.+.+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            4678888888888888888888887  678888888888776655

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.05  E-value=7e-10  Score=74.97  Aligned_cols=80  Identities=21%  Similarity=0.565  Sum_probs=65.9

Q ss_pred             CCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCC----------
Q psy13123         43 SNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSS----------  112 (129)
Q Consensus        43 ~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~----------  112 (129)
                      ..+.|+.|++.|. ...|..|+..++  .++.|+ |+..+ ....|..|+..+..++++.|..|++.|..          
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhh
Confidence            3478999999886 577999999874  789999 99754 66899999999999999999999999852          


Q ss_pred             HHHHHHHHHHhcccCC
Q psy13123        113 KHGLKYHVRTHKGECK  128 (129)
Q Consensus       113 ~~~l~~h~~~h~~e~p  128 (129)
                      .+.|..|..+. |.+|
T Consensus       527 ~s~Lt~HE~~C-G~rt  541 (567)
T PLN03086        527 LRGMSEHESIC-GSRT  541 (567)
T ss_pred             hhhHHHHHHhc-CCcc
Confidence            45788998884 6554

>PHA02768 hypothetical protein; Provisional

Probab=99.03  E-value=1.2e-10  Score=54.59  Aligned_cols=42  Identities=26%  Similarity=0.587  Sum_probs=28.4

Q ss_pred             cccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHH
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHM   60 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l   60 (129)
                      |.|+.||+.|...+.|..|++.|+  +++.|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            567777777777777777777776  566677777666655443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.01  E-value=2.6e-10  Score=45.98  Aligned_cols=25  Identities=48%  Similarity=1.020  Sum_probs=18.9

Q ss_pred             HHHHHHHHhcCCCcccCCccccccC
Q psy13123         87 DLKRHIDAHLGVKKFACETCGKLFS  111 (129)
Q Consensus        87 ~l~~h~~~~~~~~~~~C~~C~~~f~  111 (129)
                      +|..|++.|++++||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3667777788888888888877775

...

>PHA00616 hypothetical protein

Probab=98.98  E-value=2.9e-10  Score=50.82  Aligned_cols=30  Identities=23%  Similarity=0.492  Sum_probs=19.8

Q ss_pred             cccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ||.|..||+.|.+.++|..|++.|++++|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc
Confidence            456666666666666666666666666653

>PHA00733 hypothetical protein

Probab=98.96  E-value=1.1e-09  Score=61.08  Aligned_cols=94  Identities=22%  Similarity=0.332  Sum_probs=76.1

Q ss_pred             CCCCCCCCCCCCCCccccCcchhccCChhhHHHH--HH---HhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecc
Q psy13123          2 REIRPRDPLATTTSAYQCGECGKQFTRKFSLNAH--LH---VHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT   76 (129)
Q Consensus         2 ~~l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h--~~---~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~   76 (129)
                      ++|+++-......+.+.|..|...|.....|..+  +.   .+.+.+++.|..|++.|.....|..|+..+  ..++.|.
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~  103 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP  103 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC
Confidence            3556655666677889999999999887777655  21   234578999999999999999999998865  3578999


Q ss_pred             cccccccChhHHHHHHHHhcC
Q psy13123         77 YCGKAFVRASDLKRHIDAHLG   97 (129)
Q Consensus        77 ~c~~~~~~~~~l~~h~~~~~~   97 (129)
                      .|++.|.....|..|+...++
T Consensus       104 ~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        104 VCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCHHHHHHHHHHhcC
Confidence            999999999999999887654

>PHA00616 hypothetical protein

Probab=98.77  E-value=4.6e-09  Score=46.98  Aligned_cols=34  Identities=26%  Similarity=0.421  Sum_probs=25.6

Q ss_pred             ccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      ||.|..||+.|...+.|..|++.+++++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5677778887777777777777777777777653

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.70  E-value=2e-08  Score=40.41  Aligned_cols=23  Identities=52%  Similarity=1.305  Sum_probs=12.1

Q ss_pred             HHHHHHHhCCCCCeecccccccc
Q psy13123         60 MKDHIQAHGGLKPYVCTYCGKAF   82 (129)
Q Consensus        60 l~~~~~~~~~~~~~~c~~c~~~~   82 (129)
                      |..|++.|++++||.|+.|++.|
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F   24 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSF   24 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEE
T ss_pred             HHHHhhhcCCCCCCCCCCCcCee
Confidence            44455555555555555555544

...

>KOG3993|consensus

Probab=98.53  E-value=1.9e-08  Score=65.13  Aligned_cols=107  Identities=26%  Similarity=0.459  Sum_probs=65.0

Q ss_pred             ccccCcchhccCChhhHHHHHHHhCC---------------------------------CCCccCCcchhhhcchhHHHH
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHYG---------------------------------SSNYKCPLCGKFFIQLCHMKD   62 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~~---------------------------------~~~~~c~~c~~~~~~~~~l~~   62 (129)
                      -|+|++|++.|...-+|..|.+.|-.                                 +..|.|..|++.|.....|..
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrK  374 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRK  374 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHH
Confidence            37888888888888888888877621                                 112677777777777777777


Q ss_pred             HHHHhCCCC------C----------------------------------------eecccccccccChhHHHHHHHHhc
Q psy13123         63 HIQAHGGLK------P----------------------------------------YVCTYCGKAFVRASDLKRHIDAHL   96 (129)
Q Consensus        63 ~~~~~~~~~------~----------------------------------------~~c~~c~~~~~~~~~l~~h~~~~~   96 (129)
                      |+.+|....      +                                        ..+..++..+..+..--.+.+...
T Consensus       375 Hqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~  454 (500)
T KOG3993|consen  375 HQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGI  454 (500)
T ss_pred             hHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccc
Confidence            765543210      0                                        112223322222222112222222


Q ss_pred             CCCcccCCccccccCCHHHHHHHHHH
Q psy13123         97 GVKKFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus        97 ~~~~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      .+..|.|.+|.-.|..+.+|.+|...
T Consensus       455 ~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  455 AEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             hhhccccccchHhhhcCcchHhHhhh
Confidence            23458899999999999999998765

>PHA00732 hypothetical protein

Probab=98.48  E-value=1.2e-07  Score=48.48  Aligned_cols=37  Identities=32%  Similarity=0.753  Sum_probs=23.2

Q ss_pred             CccCCcchhhhcchhHHHHHHHH-hCCCCCeeccccccccc
Q psy13123         44 NYKCPLCGKFFIQLCHMKDHIQA-HGGLKPYVCTYCGKAFV   83 (129)
Q Consensus        44 ~~~c~~c~~~~~~~~~l~~~~~~-~~~~~~~~c~~c~~~~~   83 (129)
                      |+.|..|++.|.....|..|++. |.+   +.|..|++.|.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~   38 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR   38 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC
Confidence            35667777777777777777653 432   35666766665

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.45  E-value=1.4e-07  Score=36.78  Aligned_cols=23  Identities=57%  Similarity=1.051  Sum_probs=18.8

Q ss_pred             ccCCccccccCCHHHHHHHHHHh
Q psy13123        101 FACETCGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~h  123 (129)
                      |.|+.|++.|...+.|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            57888888888888888888764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3993|consensus

Probab=98.40  E-value=5.5e-08  Score=63.11  Aligned_cols=108  Identities=24%  Similarity=0.438  Sum_probs=61.7

Q ss_pred             cccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCee-cccc--cccccChhHHHHHHH
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYV-CTYC--GKAFVRASDLKRHID   93 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~-c~~c--~~~~~~~~~l~~h~~   93 (129)
                      |+|..|-..|.+.-.|.+|.........|.|+.|++.|.-..+|..|.+=|--..-.- -..-  .+.....+..+.--+
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            6677777777777777776665555566777777777777777777765443211000 0000  000000010000000


Q ss_pred             H--hcCCCcccCCccccccCCHHHHHHHHHHhc
Q psy13123         94 A--HLGVKKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        94 ~--~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      .  ...+-.|.|..|+|.|....-|+.|+-+|.
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence            0  012336999999999999999999988875

>PHA00732 hypothetical protein

Probab=98.39  E-value=2.2e-07  Score=47.51  Aligned_cols=48  Identities=27%  Similarity=0.592  Sum_probs=39.1

Q ss_pred             ccccCcchhccCChhhHHHHHHH-hCCCCCccCCcchhhhcchhHHHHHHHHhCC
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHV-HYGSSNYKCPLCGKFFIQLCHMKDHIQAHGG   69 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~-~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~   69 (129)
                      ||.|..|++.|.....|..|++. |.+   +.|+.|++.|.   .+..|+++...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---ChhhhhcccCC
Confidence            58899999999999999999984 653   58999999998   47777755443

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.21  E-value=1e-06  Score=34.25  Aligned_cols=23  Identities=43%  Similarity=0.944  Sum_probs=18.1

Q ss_pred             cccCcchhccCChhhHHHHHHHh
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVH   39 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~   39 (129)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56888888888888888887753

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.17  E-value=1e-06  Score=35.69  Aligned_cols=25  Identities=48%  Similarity=0.903  Sum_probs=20.6

Q ss_pred             cccCCccccccCCHHHHHHHHHHhc
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      +|.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5788888888888888888888775

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.15  E-value=2.3e-06  Score=33.39  Aligned_cols=24  Identities=54%  Similarity=1.027  Sum_probs=17.4

Q ss_pred             ccCCccccccCCHHHHHHHHHHhc
Q psy13123        101 FACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      |.|+.|++.|.....|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            568888888888888888887763

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.11  E-value=1.1e-05  Score=38.32  Aligned_cols=49  Identities=29%  Similarity=0.638  Sum_probs=26.3

Q ss_pred             eecccccccccChhHHHHHHHH-hcCC-CcccCCccccccCCHHHHHHHHHHhc
Q psy13123         73 YVCTYCGKAFVRASDLKRHIDA-HLGV-KKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        73 ~~c~~c~~~~~~~~~l~~h~~~-~~~~-~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      |.|+.|++ ..+...|..|... |..+ +.+.|+.|...+.  .+|..|+..++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            55666666 3445556666543 3322 3466666665433  36666666543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.03  E-value=2.4e-05  Score=37.16  Aligned_cols=47  Identities=28%  Similarity=0.536  Sum_probs=23.8

Q ss_pred             cccCcchhccCChhhHHHHHHH-hCCC-CCccCCcchhhhcchhHHHHHHHH
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHV-HYGS-SNYKCPLCGKFFIQLCHMKDHIQA   66 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~-~~~~-~~~~c~~c~~~~~~~~~l~~~~~~   66 (129)
                      |.|+.|++ ..+...|..|... |..+ +.+.|+.|...+.  .+|..|+..
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            56666666 3445556666443 3322 3456666655322  245555543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.90  E-value=1.5e-05  Score=36.57  Aligned_cols=33  Identities=15%  Similarity=0.349  Sum_probs=22.8

Q ss_pred             cCCCcccCCccccccCCHHHHHHHHHHhcccCC
Q psy13123         96 LGVKKFACETCGKLFSSKHGLKYHVRTHKGECK  128 (129)
Q Consensus        96 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p  128 (129)
                      ..+.|-.|++|+..+.+..+|++|+.+.++-+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            356788899999999999999999988877766

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.90  E-value=6e-06  Score=33.33  Aligned_cols=25  Identities=36%  Similarity=0.818  Sum_probs=19.7

Q ss_pred             ccccCcchhccCChhhHHHHHHHhC
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5778888888888888888887664

>smart00355 ZnF_C2H2 zinc finger

Probab=97.89  E-value=1.7e-05  Score=31.35  Aligned_cols=24  Identities=54%  Similarity=1.053  Sum_probs=19.5

Q ss_pred             ccCCccccccCCHHHHHHHHHHhc
Q psy13123        101 FACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      |.|..|++.|...+.|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            468888888888888888888764

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.85  E-value=1.6e-05  Score=30.88  Aligned_cols=23  Identities=43%  Similarity=0.915  Sum_probs=15.9

Q ss_pred             cccCcchhccCChhhHHHHHHHh
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVH   39 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~   39 (129)
                      |.|+.|++.|.+...|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            56778888888888888877654

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.82  E-value=1.6e-05  Score=42.44  Aligned_cols=73  Identities=21%  Similarity=0.436  Sum_probs=17.7

Q ss_pred             ccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHh
Q psy13123         18 QCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAH   95 (129)
Q Consensus        18 ~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~   95 (129)
                      .|..|+..|.....+..|+...++......    ..+.....+........ ...+.|..|+..|.+...|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~----~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQ----KYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccccc----ccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            377788888888888888764443322111    11112222222222211 12577888888888888888887753

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.66  E-value=0.0001  Score=33.89  Aligned_cols=33  Identities=18%  Similarity=0.334  Sum_probs=17.3

Q ss_pred             CCCCccccCcchhccCChhhHHHHHHHhCCCCC
Q psy13123         12 TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSN   44 (129)
Q Consensus        12 ~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~   44 (129)
                      ..+.|..|++|+..+....+|.+|+...++.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            344566677777777777777777766555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.64  E-value=5.4e-05  Score=40.39  Aligned_cols=73  Identities=23%  Similarity=0.472  Sum_probs=21.6

Q ss_pred             cCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHh
Q psy13123         46 KCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus        46 ~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h  123 (129)
                      +|..|+..|.....|..|+....+... .   ....+.....+..+.... ....+.|..|++.|.....|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~-~---~~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI-P---DQKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Ccccccccccccccccccccccccccc-c---cccccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            488999999999999999976554321 1   111122333333333321 123689999999999999999999974

>smart00355 ZnF_C2H2 zinc finger

Probab=97.45  E-value=0.00016  Score=28.33  Aligned_cols=23  Identities=48%  Similarity=1.031  Sum_probs=16.4

Q ss_pred             cccCcchhccCChhhHHHHHHHh
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVH   39 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~   39 (129)
                      |.|..|++.|.....+..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45777777777777777777654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.38  E-value=0.00021  Score=27.85  Aligned_cols=23  Identities=35%  Similarity=0.707  Sum_probs=15.7

Q ss_pred             ccCCccccccCCHHHHHHHHHHhc
Q psy13123        101 FACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      |+|..|+.... ...|..|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56778887776 778888877764

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.29  E-value=0.00015  Score=28.52  Aligned_cols=23  Identities=43%  Similarity=0.944  Sum_probs=17.2

Q ss_pred             ccCCccccccCCHHHHHHHHHHh
Q psy13123        101 FACETCGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~h  123 (129)
                      |.|..|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            46777888888888888887654

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.24  E-value=7.7e-05  Score=47.40  Aligned_cols=51  Identities=37%  Similarity=0.721  Sum_probs=36.1

Q ss_pred             CCCeeccc--ccccccChhHHHHHHHHh-------------------cCCCcccCCccccccCCHHHHHHHH
Q psy13123         70 LKPYVCTY--CGKAFVRASDLKRHIDAH-------------------LGVKKFACETCGKLFSSKHGLKYHV  120 (129)
Q Consensus        70 ~~~~~c~~--c~~~~~~~~~l~~h~~~~-------------------~~~~~~~C~~C~~~f~~~~~l~~h~  120 (129)
                      ++||.|++  |.+.+.....|.-|+.-.                   ..+|||.|.+|+|.+...-.|.-|.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            46777766  667777777776665432                   2358999999999988777766554

>PRK04860 hypothetical protein; Provisional

Probab=97.24  E-value=0.00027  Score=41.13  Aligned_cols=38  Identities=29%  Similarity=0.712  Sum_probs=31.8

Q ss_pred             CeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCH
Q psy13123         72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSK  113 (129)
Q Consensus        72 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~  113 (129)
                      +|.|. |+.   ....+..|.++++++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            58897 886   566778999999999999999999888654

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.16  E-value=0.00015  Score=46.12  Aligned_cols=70  Identities=23%  Similarity=0.392  Sum_probs=43.4

Q ss_pred             CCccccCc--chhccCChhhHHHHHHHhC-CCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHH
Q psy13123         14 TSAYQCGE--CGKQFTRKFSLNAHLHVHY-GSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKR   90 (129)
Q Consensus        14 ~~~~~C~~--C~~~~~~~~~l~~h~~~~~-~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~   90 (129)
                      ++||+|++  |.+.|+..-.|..|+..-+ ..+..+-+.          -..+.......+||+|.+|++.+.....|.-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~----------p~~~~~F~~~~KPYrCevC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPS----------PEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCC----------ccccccccccCCceeccccchhhccCcccee
Confidence            48899976  8888888888888876432 222211110          0001112344678899999888888777766


Q ss_pred             HHH
Q psy13123         91 HID   93 (129)
Q Consensus        91 h~~   93 (129)
                      |+.
T Consensus       417 Hr~  419 (423)
T COG5189         417 HRK  419 (423)
T ss_pred             ccc
Confidence            643

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.00  E-value=0.00039  Score=27.28  Aligned_cols=22  Identities=36%  Similarity=0.756  Sum_probs=16.0

Q ss_pred             cccCcchhccCChhhHHHHHHH
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHV   38 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~   38 (129)
                      |.|..|++.|.+...+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4677777777777777777654

>PRK04860 hypothetical protein; Provisional

Probab=96.98  E-value=0.0004  Score=40.47  Aligned_cols=25  Identities=24%  Similarity=0.571  Sum_probs=12.1

Q ss_pred             hHHHHHHHHhCCCCCeecccccccc
Q psy13123         58 CHMKDHIQAHGGLKPYVCTYCGKAF   82 (129)
Q Consensus        58 ~~l~~~~~~~~~~~~~~c~~c~~~~   82 (129)
                      ..+..|.++++++++|.|..|+..|
T Consensus       129 ~~~rrH~ri~~g~~~YrC~~C~~~l  153 (160)
T PRK04860        129 LTVRRHNRVVRGEAVYRCRRCGETL  153 (160)
T ss_pred             CHHHHHHHHhcCCccEECCCCCcee
Confidence            3344444555555555555554443

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.85  E-value=0.00087  Score=26.01  Aligned_cols=23  Identities=35%  Similarity=0.678  Sum_probs=15.8

Q ss_pred             cccCcchhccCChhhHHHHHHHhC
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      |.|+.|+.+.. ...|..|+..+.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            57888888887 778888877653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.61  E-value=0.00054  Score=27.48  Aligned_cols=22  Identities=45%  Similarity=0.976  Sum_probs=17.5

Q ss_pred             ccCCccccccCCHHHHHHHHHH
Q psy13123        101 FACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      |.|..|++.|.....|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5688888888888888887765

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>TIGR00622 ssl1 transcription factor ssl1

Probab=96.48  E-value=0.0037  Score=34.05  Aligned_cols=80  Identities=21%  Similarity=0.417  Sum_probs=44.8

Q ss_pred             CCccCCcchhhhcchhHHHHHHHHhCCCC------------CeecccccccccChhHHHHHHHHhcCCCcccCCcccccc
Q psy13123         43 SNYKCPLCGKFFIQLCHMKDHIQAHGGLK------------PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLF  110 (129)
Q Consensus        43 ~~~~c~~c~~~~~~~~~l~~~~~~~~~~~------------~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f  110 (129)
                      .|..|+.|+........|.+.-----..+            ...|..|...|.......  ...-.....|.|+.|...|
T Consensus        14 LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~--~~~~~~~~~y~C~~C~~~F   91 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSP--FDELKDSHRYVCAVCKNVF   91 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCccccc--ccccccccceeCCCCCCcc
Confidence            45667777776666666665321100001            113777777665432110  0001223468899998888


Q ss_pred             CCHHHHHHHHHHhc
Q psy13123        111 SSKHGLKYHVRTHK  124 (129)
Q Consensus       111 ~~~~~l~~h~~~h~  124 (129)
                      -.+-+.-.|...|.
T Consensus        92 C~dCD~fiHe~Lh~  105 (112)
T TIGR00622        92 CVDCDVFVHESLHC  105 (112)
T ss_pred             ccccchhhhhhccC
Confidence            88888888876663

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.10  E-value=0.0076  Score=23.69  Aligned_cols=21  Identities=29%  Similarity=0.722  Sum_probs=13.0

Q ss_pred             ccCCccccccCCHHHHHHHHHH
Q psy13123        101 FACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      ..|+.||+.| ..+.|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3577777777 55556666543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.57  E-value=0.012  Score=24.94  Aligned_cols=23  Identities=22%  Similarity=0.618  Sum_probs=18.8

Q ss_pred             cccCCccccccCCHHHHHHHHHH
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      +|.|..|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46789999999988888888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146|consensus

Probab=95.43  E-value=0.0075  Score=45.52  Aligned_cols=80  Identities=16%  Similarity=0.269  Sum_probs=41.3

Q ss_pred             CCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHH
Q psy13123         11 ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKR   90 (129)
Q Consensus        11 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~   90 (129)
                      ++-.+.++|+.|+..|+....|..||+..+-+...  ..|. .+.....+.+....-.+.++|.|..|...+....+|.+
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~-~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsi  536 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCK-AGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSI  536 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccch--hHhH-hccccccccccccccCCCCcccceeeeeeeecchHHHH
Confidence            33446677888888888888888888763322111  1111 11111111111112223345666666666666666666


Q ss_pred             HHH
Q psy13123         91 HID   93 (129)
Q Consensus        91 h~~   93 (129)
                      |+.
T Consensus       537 hlq  539 (1406)
T KOG1146|consen  537 HLQ  539 (1406)
T ss_pred             HHH
Confidence            654

>KOG2893|consensus

Probab=94.57  E-value=0.0079  Score=37.11  Aligned_cols=41  Identities=39%  Similarity=0.724  Sum_probs=27.4

Q ss_pred             cccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHH
Q psy13123         75 CTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYH  119 (129)
Q Consensus        75 c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h  119 (129)
                      |=.|++.|.+.-.|+.|++.    +.|+|.+|.|.+-....|..|
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceee
Confidence            44577777777777766653    457777777766566666666

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.45  E-value=0.028  Score=23.67  Aligned_cols=10  Identities=50%  Similarity=1.398  Sum_probs=5.6

Q ss_pred             eecccccccc
Q psy13123         73 YVCTYCGKAF   82 (129)
Q Consensus        73 ~~c~~c~~~~   82 (129)
                      |+|..||..+
T Consensus         2 ~~C~~CGy~y   11 (33)
T cd00350           2 YVCPVCGYIY   11 (33)
T ss_pred             EECCCCCCEE
Confidence            4566666544

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2785|consensus

Probab=93.99  E-value=0.41  Score=31.91  Aligned_cols=51  Identities=27%  Similarity=0.540  Sum_probs=38.9

Q ss_pred             CeecccccccccChhHHHHHHHHhcCC-----------------------CcccCCccc---cccCCHHHHHHHHHH
Q psy13123         72 PYVCTYCGKAFVRASDLKRHIDAHLGV-----------------------KKFACETCG---KLFSSKHGLKYHVRT  122 (129)
Q Consensus        72 ~~~c~~c~~~~~~~~~l~~h~~~~~~~-----------------------~~~~C~~C~---~~f~~~~~l~~h~~~  122 (129)
                      |-.|..|+..+.+......||..+++-                       +-+-|..|+   +.|.+....+.|+..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            456888888888887788888776652                       236677888   888888888888775

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.75  E-value=0.038  Score=26.01  Aligned_cols=23  Identities=26%  Similarity=0.612  Sum_probs=10.7

Q ss_pred             CCcccCCccccccCCHHHHHHHH
Q psy13123         98 VKKFACETCGKLFSSKHGLKYHV  120 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~h~  120 (129)
                      |-.+.|+.|+..|.+.-++.+|.
T Consensus        15 E~~lrCPRC~~~FR~~K~Y~RHV   37 (65)
T COG4049          15 EEFLRCPRCGMVFRRRKDYIRHV   37 (65)
T ss_pred             ceeeeCCchhHHHHHhHHHHHHh
Confidence            33444444444444444444443

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.49  E-value=0.29  Score=26.71  Aligned_cols=25  Identities=32%  Similarity=0.743  Sum_probs=22.7

Q ss_pred             ccC----CccccccCCHHHHHHHHHHhcc
Q psy13123        101 FAC----ETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus       101 ~~C----~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      |.|    ..|+..+.....+..|.+.++|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            889    9999999999999999998764

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2231|consensus

Probab=93.34  E-value=0.22  Score=35.72  Aligned_cols=95  Identities=19%  Similarity=0.373  Sum_probs=50.7

Q ss_pred             hccCChhhHHHHHH-HhCCCCCccCCc-------chhhhcchhHHHHHHHH-hCCCC----CeecccccccccChhHHHH
Q psy13123         24 KQFTRKFSLNAHLH-VHYGSSNYKCPL-------CGKFFIQLCHMKDHIQA-HGGLK----PYVCTYCGKAFVRASDLKR   90 (129)
Q Consensus        24 ~~~~~~~~l~~h~~-~~~~~~~~~c~~-------c~~~~~~~~~l~~~~~~-~~~~~----~~~c~~c~~~~~~~~~l~~   90 (129)
                      ..|.....|..|+. .|..-.-..|..       +.+.| ....|..|++. ..+++    .-.|..|...|.....+..
T Consensus       122 ~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Y-t~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~r  200 (669)
T KOG2231|consen  122 TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLY-TRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYR  200 (669)
T ss_pred             cchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehe-hHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHH
Confidence            33446678888885 443222222221       22223 33445555543 22222    2357778888888888888


Q ss_pred             HHHHhcCCCcccCCcc------ccccCCHHHHHHHHHHh
Q psy13123         91 HIDAHLGVKKFACETC------GKLFSSKHGLKYHVRTH  123 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C------~~~f~~~~~l~~h~~~h  123 (129)
                      |++..+.    .|..|      +.-|..-.+|..|.|.+
T Consensus       201 H~~~~h~----~chfC~~~~~~neyy~~~~dLe~HfR~~  235 (669)
T KOG2231|consen  201 HLRFDHE----FCHFCDYKTGQNEYYNDYDDLEEHFRKG  235 (669)
T ss_pred             hhcccee----heeecCcccccchhcccchHHHHHhhhc
Confidence            8775543    33333      34455666677776653

>TIGR00622 ssl1 transcription factor ssl1

Probab=92.93  E-value=0.15  Score=28.01  Aligned_cols=85  Identities=21%  Similarity=0.327  Sum_probs=53.4

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCC-----CC-------CccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccc
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYG-----SS-------NYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAF   82 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~-----~~-------~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~   82 (129)
                      -|..|+.||-+......|.+....--.     +.       ...|-.|...|.........  .......|.|..|...|
T Consensus        14 LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~--~~~~~~~y~C~~C~~~F   91 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFD--ELKDSHRYVCAVCKNVF   91 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCccccccc--ccccccceeCCCCCCcc
Confidence            367899999988888877765422111     11       12477788877654311100  02223468999999999


Q ss_pred             cChhHHHHHHHHhcCCCcccCCccc
Q psy13123         83 VRASDLKRHIDAHLGVKKFACETCG  107 (129)
Q Consensus        83 ~~~~~l~~h~~~~~~~~~~~C~~C~  107 (129)
                      -..-+...|...|      .|+.|.
T Consensus        92 C~dCD~fiHe~Lh------~CPGC~  110 (112)
T TIGR00622        92 CVDCDVFVHESLH------CCPGCI  110 (112)
T ss_pred             ccccchhhhhhcc------CCcCCC
Confidence            9888888886655      466653

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=92.92  E-value=0.097  Score=22.62  Aligned_cols=32  Identities=31%  Similarity=0.724  Sum_probs=16.3

Q ss_pred             ecccccccccChhHHHHHHHHhcCCCcccCCcccccc
Q psy13123         74 VCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLF  110 (129)
Q Consensus        74 ~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f  110 (129)
                      .|+.|+..|.-..+-.     ..+.+..+|..|+..|
T Consensus         4 ~CP~C~~~f~v~~~~l-----~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDDKL-----PAGGRKVRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHHHc-----ccCCcEEECCCCCcEe
Confidence            4666666555544311     1233455666666555

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=91.69  E-value=0.12  Score=21.85  Aligned_cols=25  Identities=28%  Similarity=0.657  Sum_probs=14.3

Q ss_pred             CeecccccccccChhHHHHHHHHhcCCCcccCCcccc
Q psy13123         72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGK  108 (129)
Q Consensus        72 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~  108 (129)
                      .|+|..||..+...            +.|..|+.||-
T Consensus         2 ~~~C~~CG~i~~g~------------~~p~~CP~Cg~   26 (34)
T cd00729           2 VWVCPVCGYIHEGE------------EAPEKCPICGA   26 (34)
T ss_pred             eEECCCCCCEeECC------------cCCCcCcCCCC
Confidence            36777777655432            13456777764

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=91.60  E-value=0.17  Score=21.73  Aligned_cols=33  Identities=21%  Similarity=0.562  Sum_probs=17.2

Q ss_pred             eecccccccccChhHHHHHHHHhcCCCcccCCcccccc
Q psy13123         73 YVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLF  110 (129)
Q Consensus        73 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f  110 (129)
                      ..|+.|+..|.-.+...     -...+..+|..|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~i-----p~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEKI-----PPKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHHC-----CCCCcEEECCCCCCEe
Confidence            35666666665554422     1223445666666655

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.59  E-value=0.025  Score=37.87  Aligned_cols=56  Identities=41%  Similarity=0.743  Sum_probs=36.3

Q ss_pred             CeecccccccccChhHHHHHHH--HhcCC--CcccCC--ccccccCCHHHHHHHHHHhcccC
Q psy13123         72 PYVCTYCGKAFVRASDLKRHID--AHLGV--KKFACE--TCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        72 ~~~c~~c~~~~~~~~~l~~h~~--~~~~~--~~~~C~--~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ++.|..|...|.....+..|.+  .|.++  +++.|.  .|++.|.+...+..|..+|++-.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  350 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSIS  350 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCC
Confidence            4556666666666666666666  56666  666666  57777777666666666665433

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=91.23  E-value=0.16  Score=21.90  Aligned_cols=14  Identities=21%  Similarity=0.553  Sum_probs=7.1

Q ss_pred             eecccccccccChh
Q psy13123         73 YVCTYCGKAFVRAS   86 (129)
Q Consensus        73 ~~c~~c~~~~~~~~   86 (129)
                      +.|+.|+..|.-..
T Consensus         3 ~~CP~C~~~~~v~~   16 (38)
T TIGR02098         3 IQCPNCKTSFRVVD   16 (38)
T ss_pred             EECCCCCCEEEeCH
Confidence            34555655554443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>KOG2231|consensus

Probab=90.68  E-value=0.58  Score=33.75  Aligned_cols=79  Identities=20%  Similarity=0.318  Sum_probs=46.4

Q ss_pred             CCcchhhhcchhHHHHHHHHhCC-CCCeeccccccccc------ChhHHHHHHHHh-cCCCc----ccCCccccccCCHH
Q psy13123         47 CPLCGKFFIQLCHMKDHIQAHGG-LKPYVCTYCGKAFV------RASDLKRHIDAH-LGVKK----FACETCGKLFSSKH  114 (129)
Q Consensus        47 c~~c~~~~~~~~~l~~~~~~~~~-~~~~~c~~c~~~~~------~~~~l~~h~~~~-~~~~~----~~C~~C~~~f~~~~  114 (129)
                      |..| ..|.....|..|+...+. ..-..|....+.|.      ....++.|+... .++..    ..|..|...|-...
T Consensus       118 ~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~  196 (669)
T KOG2231|consen  118 CLHC-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDD  196 (669)
T ss_pred             Cccc-cchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHH
Confidence            4444 445577788888865432 11112332222222      235566666542 22332    45888999999999


Q ss_pred             HHHHHHHHhccc
Q psy13123        115 GLKYHVRTHKGE  126 (129)
Q Consensus       115 ~l~~h~~~h~~e  126 (129)
                      .|.+|++.++.+
T Consensus       197 el~rH~~~~h~~  208 (669)
T KOG2231|consen  197 ELYRHLRFDHEF  208 (669)
T ss_pred             HHHHhhccceeh
Confidence            999999976544

>smart00614 ZnF_BED BED zinc finger

Probab=90.22  E-value=0.24  Score=22.90  Aligned_cols=23  Identities=39%  Similarity=0.798  Sum_probs=15.3

Q ss_pred             ccCCccccccCCH-----HHHHHHHH-Hh
Q psy13123        101 FACETCGKLFSSK-----HGLKYHVR-TH  123 (129)
Q Consensus       101 ~~C~~C~~~f~~~-----~~l~~h~~-~h  123 (129)
                      ..|..|++.+...     ++|.+|++ +|
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~~h   47 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRRKH   47 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHhHC
Confidence            4577777766554     57778877 44

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=90.05  E-value=0.3  Score=21.85  Aligned_cols=25  Identities=36%  Similarity=0.685  Sum_probs=13.7

Q ss_pred             CCCcccCCccccccCCH----HHHHHHHH
Q psy13123         97 GVKKFACETCGKLFSSK----HGLKYHVR  121 (129)
Q Consensus        97 ~~~~~~C~~C~~~f~~~----~~l~~h~~  121 (129)
                      +.....|..|++.+...    +.|..|++
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL~   41 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHLK   41 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHHH
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhhh
Confidence            34556777787776654    67777774

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=90.03  E-value=0.16  Score=27.71  Aligned_cols=29  Identities=31%  Similarity=0.717  Sum_probs=17.2

Q ss_pred             ccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcch
Q psy13123         18 QCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQL   57 (129)
Q Consensus        18 ~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~   57 (129)
                      .|+.||..|...           +..|..|+.||..|...
T Consensus        11 ~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   11 TCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            566777666432           23566677776666554

The function of members of this family is unknown.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=89.50  E-value=0.22  Score=29.38  Aligned_cols=10  Identities=40%  Similarity=1.162  Sum_probs=5.5

Q ss_pred             CccCCcchhh
Q psy13123         44 NYKCPLCGKF   53 (129)
Q Consensus        44 ~~~c~~c~~~   53 (129)
                      .|.|+.||.+
T Consensus       134 ~~vC~vCGy~  143 (166)
T COG1592         134 VWVCPVCGYT  143 (166)
T ss_pred             EEEcCCCCCc
Confidence            4556666543

>KOG2482|consensus

Probab=89.48  E-value=0.58  Score=30.86  Aligned_cols=103  Identities=23%  Similarity=0.363  Sum_probs=60.5

Q ss_pred             cccCcchhccCChhhHHHHHHH--hCCCCC--------ccCC--cchhhhcch-hHHHHHHHH--hCC------------
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHV--HYGSSN--------YKCP--LCGKFFIQL-CHMKDHIQA--HGG------------   69 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~--~~~~~~--------~~c~--~c~~~~~~~-~~l~~~~~~--~~~------------   69 (129)
                      +.|-.|.+.|.++..|..||+.  |....|        |.-.  .-++.+... ..+  .+..  ..+            
T Consensus       196 ~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~--dret~~d~~E~D~~wsDw~ed  273 (423)
T KOG2482|consen  196 LRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSED--DRETNEDINETDDTWSDWNED  273 (423)
T ss_pred             heeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhh--hhhhhccccccccchhhhhcC
Confidence            6799999999999999999975  322222        1111  111211111 000  0111  111            


Q ss_pred             -CCC--eecccccccccChhHHHHHHHHhcC---------------------------CCcccCCccccccCCHHHHHHH
Q psy13123         70 -LKP--YVCTYCGKAFVRASDLKRHIDAHLG---------------------------VKKFACETCGKLFSSKHGLKYH  119 (129)
Q Consensus        70 -~~~--~~c~~c~~~~~~~~~l~~h~~~~~~---------------------------~~~~~C~~C~~~f~~~~~l~~h  119 (129)
                       ..+  .+|..|.....+...+..|++.-+.                           .+.-.|-.|.-.|.....|..|
T Consensus       274 ~a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~h  353 (423)
T KOG2482|consen  274 DAEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIH  353 (423)
T ss_pred             CCCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhh
Confidence             112  4788888877778888888874221                           1124466787889999998888


Q ss_pred             HH
Q psy13123        120 VR  121 (129)
Q Consensus       120 ~~  121 (129)
                      +-
T Consensus       354 m~  355 (423)
T KOG2482|consen  354 MV  355 (423)
T ss_pred             cc
Confidence            65

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=88.80  E-value=0.21  Score=23.94  Aligned_cols=49  Identities=29%  Similarity=0.701  Sum_probs=29.0

Q ss_pred             cccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccc
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGK   80 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~   80 (129)
                      -.|..||....-          ..+...|.|+.||+.......     +.-....+|.|+.||.
T Consensus        10 ~~CtSCg~~i~p----------~e~~v~F~CPnCGe~~I~Rc~-----~CRk~g~~Y~Cp~CGF   58 (61)
T COG2888          10 PVCTSCGREIAP----------GETAVKFPCPNCGEVEIYRCA-----KCRKLGNPYRCPKCGF   58 (61)
T ss_pred             ceeccCCCEecc----------CCceeEeeCCCCCceeeehhh-----hHHHcCCceECCCcCc
Confidence            467777765422          123456889999866554432     2222345789998873

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=88.58  E-value=0.6  Score=27.39  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=17.7

Q ss_pred             CCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccc
Q psy13123         41 GSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAF   82 (129)
Q Consensus        41 ~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~   82 (129)
                      +..-|.|+.|+..|.....+.         ..|.|+.||...
T Consensus       106 ~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373       106 NNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             CCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            344466666666555554432         146666666543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>KOG1146|consensus

Probab=88.46  E-value=0.097  Score=40.05  Aligned_cols=23  Identities=30%  Similarity=0.681  Sum_probs=17.8

Q ss_pred             CcccCCccccccCCHHHHHHHHHH
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      .+| |..|...|+....|.+|+++
T Consensus      1328 ~~~-c~~c~~~~~~~~alqihm~~ 1350 (1406)
T KOG1146|consen 1328 TYH-CLACEVLLSGREALQIHMRS 1350 (1406)
T ss_pred             ccc-chHHHhhcchhHHHHHHHHH
Confidence            345 88888888888888888876

>KOG2186|consensus

Probab=88.45  E-value=0.29  Score=30.76  Aligned_cols=48  Identities=25%  Similarity=0.591  Sum_probs=33.5

Q ss_pred             CccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHH
Q psy13123         44 NYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDA   94 (129)
Q Consensus        44 ~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~   94 (129)
                      .|.|..||....-.. +..|+..-++ ..|.|..|+..|.. .+...|.+-
T Consensus         3 ~FtCnvCgEsvKKp~-vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    3 FFTCNVCGESVKKPQ-VEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             EEehhhhhhhccccc-hHHHHHhccC-CeeEEeeccccccc-chhhhhhhh
Confidence            367888888766444 6668766555 57888889888877 455566553

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.44  E-value=0.068  Score=35.80  Aligned_cols=57  Identities=35%  Similarity=0.732  Sum_probs=39.7

Q ss_pred             ccccCcchhccCChhhHHHHHH--HhCCC--CCccCC--cchhhhcchhHHHHHHHHhCCCCC
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLH--VHYGS--SNYKCP--LCGKFFIQLCHMKDHIQAHGGLKP   72 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~--~~~~~--~~~~c~--~c~~~~~~~~~l~~~~~~~~~~~~   72 (129)
                      ++.|..|...|.....+..|..  .|+++  +++.|+  .|++.|.....+..|...+.+..+
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP  351 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCc
Confidence            5667777777777777777777  67777  677777  677777777766666666665443

>smart00531 TFIIE Transcription initiation factor IIE

Probab=87.04  E-value=1  Score=26.06  Aligned_cols=38  Identities=24%  Similarity=0.524  Sum_probs=18.5

Q ss_pred             CCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccc
Q psy13123         41 GSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAF   82 (129)
Q Consensus        41 ~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~   82 (129)
                      +...|.|+.|+..|.....+..   ... ...|.|+.||...
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~~---~d~-~~~f~Cp~Cg~~l  133 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQL---LDM-DGTFTCPRCGEEL  133 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHHh---cCC-CCcEECCCCCCEE
Confidence            3445667777666654332211   011 2236666666544

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=86.71  E-value=0.83  Score=18.00  Aligned_cols=19  Identities=16%  Similarity=0.434  Sum_probs=13.0

Q ss_pred             cCCccccccCCHHHHHHHHH
Q psy13123        102 ACETCGKLFSSKHGLKYHVR  121 (129)
Q Consensus       102 ~C~~C~~~f~~~~~l~~h~~  121 (129)
                      .|+.|++.+ ....+..|+.
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            577887777 5566667764

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>KOG2186|consensus

Probab=86.67  E-value=0.36  Score=30.37  Aligned_cols=49  Identities=22%  Similarity=0.593  Sum_probs=37.2

Q ss_pred             cccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhC
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHG   68 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~   68 (129)
                      |.|..||.+.+.. .+..|+-.-++ .-|.|..|++.|.. .+...|...-+
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcc
Confidence            7899999988654 45568877766 77899999999987 55666765444

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=86.60  E-value=0.67  Score=27.78  Aligned_cols=34  Identities=24%  Similarity=0.481  Sum_probs=20.8

Q ss_pred             CCCCccCCcchhhhcchhHHHHHHHHhCCCCCeeccccccccc
Q psy13123         41 GSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFV   83 (129)
Q Consensus        41 ~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~   83 (129)
                      +..-|.|+.|+..|.....+.         ..|.|+.||..+.
T Consensus       114 ~~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        114 NNMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLE  147 (178)
T ss_pred             CCCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCe
Confidence            345577777777666655432         2577777776443

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=86.30  E-value=0.16  Score=23.61  Aligned_cols=12  Identities=42%  Similarity=1.243  Sum_probs=7.8

Q ss_pred             cccCcchhccCC
Q psy13123         17 YQCGECGKQFTR   28 (129)
Q Consensus        17 ~~C~~C~~~~~~   28 (129)
                      |.|..||..|..
T Consensus         6 y~C~~Cg~~fe~   17 (52)
T TIGR02605         6 YRCTACGHRFEV   17 (52)
T ss_pred             EEeCCCCCEeEE
Confidence            667777776643

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=86.27  E-value=0.084  Score=32.51  Aligned_cols=21  Identities=29%  Similarity=0.556  Sum_probs=14.8

Q ss_pred             CCccccCcchhccCChhhHHH
Q psy13123         14 TSAYQCGECGKQFTRKFSLNA   34 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~   34 (129)
                      ++...|+.|+..|..+.....
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~   23 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSG   23 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcC
Confidence            456789999998887655433

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=85.96  E-value=0.84  Score=21.96  Aligned_cols=9  Identities=33%  Similarity=1.298  Sum_probs=4.7

Q ss_pred             CcccCCccc
Q psy13123         99 KKFACETCG  107 (129)
Q Consensus        99 ~~~~C~~C~  107 (129)
                      .+|.|+.||
T Consensus        47 ~~Y~CP~CG   55 (59)
T PRK14890         47 NPYTCPKCG   55 (59)
T ss_pred             CceECCCCC
Confidence            345555554

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=85.59  E-value=1.2  Score=26.11  Aligned_cols=35  Identities=17%  Similarity=0.493  Sum_probs=26.6

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcccccc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLF  110 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f  110 (129)
                      .....-|.|+.|+..|+....+.         --|.|+.||...
T Consensus       104 e~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373       104 ETNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             ccCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            44456799999998887776664         259999999764

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=85.37  E-value=0.33  Score=22.00  Aligned_cols=10  Identities=40%  Similarity=1.474  Sum_probs=5.7

Q ss_pred             cccCcchhcc
Q psy13123         17 YQCGECGKQF   26 (129)
Q Consensus        17 ~~C~~C~~~~   26 (129)
                      |.|+.||..+
T Consensus         4 y~C~~CG~~~   13 (46)
T PRK00398          4 YKCARCGREV   13 (46)
T ss_pred             EECCCCCCEE
Confidence            5566666554

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=85.13  E-value=0.5  Score=26.86  Aligned_cols=24  Identities=46%  Similarity=0.822  Sum_probs=14.0

Q ss_pred             cccCCccccccCCHHHHHHHHHHhccc
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      ...|-+||+.|...   .+|+++|+|-
T Consensus        72 ~i~clecGk~~k~L---krHL~~~~gl   95 (132)
T PF05443_consen   72 YIICLECGKKFKTL---KRHLRTHHGL   95 (132)
T ss_dssp             -EE-TBT--EESBH---HHHHHHTT-S
T ss_pred             eeEEccCCcccchH---HHHHHHccCC
Confidence            45688888888654   7888888553

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>PF13878 zf-C2H2_3: zinc-finger of acetyl-transferase ESCO

Probab=85.00  E-value=1.7  Score=19.22  Aligned_cols=23  Identities=22%  Similarity=0.442  Sum_probs=15.4

Q ss_pred             cccCcchhccCCh--hhHHHHHHHh
Q psy13123         17 YQCGECGKQFTRK--FSLNAHLHVH   39 (129)
Q Consensus        17 ~~C~~C~~~~~~~--~~l~~h~~~~   39 (129)
                      -.|+.||+.|...  .+...|.+.|
T Consensus        14 ~~C~~CgM~Y~~~~~eD~~~H~~yH   38 (41)
T PF13878_consen   14 TTCPTCGMLYSPGSPEDEKLHKKYH   38 (41)
T ss_pred             cCCCCCCCEECCCCHHHHHHHHHHH
Confidence            5788899887643  4456666655

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=84.87  E-value=0.19  Score=21.97  Aligned_cols=30  Identities=30%  Similarity=0.798  Sum_probs=15.5

Q ss_pred             ccccCcchhccCChhhHHHHHHHhCCCCCccCCcchh
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGK   52 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~   52 (129)
                      .|.|..||..|......       .......|+.||.
T Consensus         5 ~y~C~~Cg~~fe~~~~~-------~~~~~~~CP~Cg~   34 (41)
T smart00834        5 EYRCEDCGHTFEVLQKI-------SDDPLATCPECGG   34 (41)
T ss_pred             EEEcCCCCCEEEEEEec-------CCCCCCCCCCCCC
Confidence            36677777766433221       1133445666665

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>KOG2593|consensus

Probab=84.46  E-value=0.33  Score=32.86  Aligned_cols=39  Identities=26%  Similarity=0.627  Sum_probs=20.0

Q ss_pred             CCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchh
Q psy13123         11 ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGK   52 (129)
Q Consensus        11 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~   52 (129)
                      -+....|.|+.|.+.|...   ...+........|.|..|+.
T Consensus       123 ~t~~~~Y~Cp~C~kkyt~L---ea~~L~~~~~~~F~C~~C~g  161 (436)
T KOG2593|consen  123 DTNVAGYVCPNCQKKYTSL---EALQLLDNETGEFHCENCGG  161 (436)
T ss_pred             ccccccccCCccccchhhh---HHHHhhcccCceEEEecCCC
Confidence            3444456677777666333   23333333345566666653

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=84.34  E-value=0.49  Score=29.21  Aligned_cols=23  Identities=30%  Similarity=0.665  Sum_probs=11.0

Q ss_pred             CeecccccccccChhHHHHHHHH
Q psy13123         72 PYVCTYCGKAFVRASDLKRHIDA   94 (129)
Q Consensus        72 ~~~c~~c~~~~~~~~~l~~h~~~   94 (129)
                      .|.|..|++.|.....+..|+..
T Consensus        77 K~~C~lc~KlFkg~eFV~KHI~n   99 (214)
T PF04959_consen   77 KWRCPLCGKLFKGPEFVRKHIFN   99 (214)
T ss_dssp             EEEE-SSS-EESSHHHHHHHHHH
T ss_pred             EECCCCCCcccCChHHHHHHHhh
Confidence            35555555555555555555543

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>KOG4173|consensus

Probab=83.68  E-value=1.2  Score=27.25  Aligned_cols=74  Identities=27%  Similarity=0.578  Sum_probs=52.3

Q ss_pred             ccCCc--chhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHh----------cCCCcccC--Ccccccc
Q psy13123         45 YKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAH----------LGVKKFAC--ETCGKLF  110 (129)
Q Consensus        45 ~~c~~--c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~----------~~~~~~~C--~~C~~~f  110 (129)
                      +.|+.  |...|........|...-++.   .|.+|.++|...-.|..|+.-.          .|.-.|.|  ..|+..|
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KF  156 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKF  156 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhh
Confidence            56765  666777777677665543332   7999999998888888887533          33456888  4599999


Q ss_pred             CCHHHHHHHHH
Q psy13123        111 SSKHGLKYHVR  121 (129)
Q Consensus       111 ~~~~~l~~h~~  121 (129)
                      .....-..|+.
T Consensus       157 kT~r~RkdH~I  167 (253)
T KOG4173|consen  157 KTSRDRKDHMI  167 (253)
T ss_pred             hhhhhhhhHHH
Confidence            88888777754

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=82.74  E-value=0.74  Score=20.75  Aligned_cols=11  Identities=55%  Similarity=1.419  Sum_probs=6.2

Q ss_pred             cccCcchhccC
Q psy13123         17 YQCGECGKQFT   27 (129)
Q Consensus        17 ~~C~~C~~~~~   27 (129)
                      |.|..||..|.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            55666666543

present in RNA polymerase I, II and III

>KOG2482|consensus

Probab=82.59  E-value=2.5  Score=28.10  Aligned_cols=53  Identities=25%  Similarity=0.479  Sum_probs=37.1

Q ss_pred             ccccCcchhccC-ChhhHHHHHHH-hC---C------------------CCCccCCcchhhhcchhHHHHHHHHhC
Q psy13123         16 AYQCGECGKQFT-RKFSLNAHLHV-HY---G------------------SSNYKCPLCGKFFIQLCHMKDHIQAHG   68 (129)
Q Consensus        16 ~~~C~~C~~~~~-~~~~l~~h~~~-~~---~------------------~~~~~c~~c~~~~~~~~~l~~~~~~~~   68 (129)
                      +..|-.|...+. .++....|+-. |.   |                  -..+.|..|.+.|.....|..||+...
T Consensus       144 slqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~  219 (423)
T KOG2482|consen  144 SLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKR  219 (423)
T ss_pred             eeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhcc
Confidence            356888886654 45666666642 31   1                  123889999999999999999998643

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=82.37  E-value=1.5  Score=29.08  Aligned_cols=20  Identities=30%  Similarity=0.582  Sum_probs=10.4

Q ss_pred             CCccccccCCHHHHHHHHHH
Q psy13123        103 CETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus       103 C~~C~~~f~~~~~l~~h~~~  122 (129)
                      |..|...|.....|.+|.|.
T Consensus       223 C~FC~~~FYdDDEL~~HcR~  242 (493)
T COG5236         223 CIFCKIYFYDDDELRRHCRL  242 (493)
T ss_pred             hhhccceecChHHHHHHHHh
Confidence            44555555555555555443

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=81.15  E-value=0.23  Score=29.02  Aligned_cols=12  Identities=42%  Similarity=0.883  Sum_probs=6.5

Q ss_pred             eecccccccccC
Q psy13123         73 YVCTYCGKAFVR   84 (129)
Q Consensus        73 ~~c~~c~~~~~~   84 (129)
                      +.|+.||..|..
T Consensus        29 ~~c~~c~~~f~~   40 (154)
T PRK00464         29 RECLACGKRFTT   40 (154)
T ss_pred             eeccccCCcceE
Confidence            455556555544

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=80.79  E-value=0.95  Score=25.43  Aligned_cols=30  Identities=20%  Similarity=0.296  Sum_probs=19.0

Q ss_pred             cccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcch
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQL   57 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~   57 (129)
                      ..|+.||..|...           +..|..|+.||..|...
T Consensus        10 r~Cp~cg~kFYDL-----------nk~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        10 RICPNTGSKFYDL-----------NRRPAVSPYTGEQFPPE   39 (129)
T ss_pred             ccCCCcCcccccc-----------CCCCccCCCcCCccCcc
Confidence            3577777776432           34667777777766544

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	129
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-25
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-17
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-14
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		8e-13
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-12
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		8e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-12
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-08
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-12
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-12
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-12
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-12
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		8e-12
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-07
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-11
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-11
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-11
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		7e-11
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-10
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-10
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-10
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-10
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		6e-10
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		9e-10
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-09
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-09
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-09
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		6e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-06
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		2e-07
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		4e-07
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		1e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		1e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		8e-04
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-06
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-06
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		4e-04
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		8e-06
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		2e-05
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		1e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		2e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 61/117 (52%)
Query: 10  LATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGG 69
           L      Y C ECGK F+R   L  H   H G   YKCP CGK F     +  H + H G
Sbjct: 15  LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG 74
Query: 70  LKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
            KPY C  CGK+F + ++L+ H   H G K +AC  CGK FS    L+ H RTH GE
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE 131

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 49/81 (60%)
Query: 45  YKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
           YKCP CGK F Q  +++ H + H G KPY C  CGK+F ++SDL++H   H G K + C 
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCP 64
Query: 105 TCGKLFSSKHGLKYHVRTHKG 125
            CGK FS    L  H RTH+ 
Sbjct: 65  ECGKSFSRSDHLSRHQRTHQN 85

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 48  PLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACET 105
           P C K + +L H++ H + H G KPY C +  C + F R+  LKRH   H GVK F C+T
Sbjct: 12  PGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT 71
Query: 106 CGKLFSSKHGLKYHVRTHKGE 126
           C + FS    LK H RTH GE
Sbjct: 72  CQRKFSRSDHLKTHTRTHTGE 92

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 44  NYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
           ++ C +CGK F +   +  H+  H   +PY C YCGK F + SD+K+H   H G K   C
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 104 ETCGKLFSSKHGLKYHVRTHKG 125
           + CGK FS    L  H R H G
Sbjct: 61  QVCGKAFSQSSNLITHSRKHTG 82

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 22 CGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKA 81
          C ++F+R   L  H+ +H G   ++C +C + F +  H+  HI+ H G KP+ C  CG+ 
Sbjct: 12 CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 82 FVRASDLKRHIDAHLGVK 99
          F R+ + KRH   HL  K
Sbjct: 72 FARSDERKRHTKIHLRQK 89

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 71  KPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           +PY C    C + F R+++L RHI  H G K F C  C + FS    L  H+RTH GE
Sbjct: 3   RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 22 CGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKA 81
          C ++F+R   L  H+ +H G   ++C +C + F +  H+  HI+ H G KP+ C  CG+ 
Sbjct: 12 CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 82 FVRASDLKRHIDAHLGVK 99
          F R+ + KRH   HL  K
Sbjct: 72 FARSDERKRHTKIHLRQK 89

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 71  KPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           +PY C    C + F R++DL RHI  H G K F C  C + FS    L  H+RTH GE
Sbjct: 3   RPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 22 CGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKA 81
          C ++F+R   L  H+ +H G   ++C +C + F +  H+  HI+ H G KP+ C  CG+ 
Sbjct: 12 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 82 FVRASDLKRHIDAHLGVK 99
          F R+ + KRH   HL  K
Sbjct: 72 FARSDERKRHTKIHLRQK 89

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 71  KPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           +PY C    C + F R+ +L RHI  H G K F C  C + FS    L  H+RTH GE
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 22 CGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKA 81
          C ++F+R   L  H+ +H G   ++C +C + F +  H+  HI+ H G KP+ C  CG+ 
Sbjct: 11 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 70
Query: 82 FVRASDLKRHIDAHL 96
          F R+ + KRH   HL
Sbjct: 71 FARSDERKRHTKIHL 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 71  KPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           +PY C    C + F R+ +L RHI  H G K F C  C + FS    L  H+RTH GE
Sbjct: 2   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 59

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 22 CGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKA 81
          C ++F+R   L  H+ +H G   ++C +C + F +  H+  HI+ H G KP+ C  CG+ 
Sbjct: 12 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 82 FVRASDLKRHIDAHL 96
          F R+ + KRH   HL
Sbjct: 72 FARSDERKRHTKIHL 86

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 71  KPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           +PY C    C + F R+ +L RHI  H G K F C  C + FS    L  H+RTH GE
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 22 CGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKA 81
          C ++F++  SL  H+ +H G   ++C +C + F +  H+  HI+ H G KP+ C  CG+ 
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 82 FVRASDLKRHIDAHLGVK 99
          F R+ + KRH   HL  K
Sbjct: 72 FARSDERKRHTKIHLRQK 89

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 71  KPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           +PY C    C + F ++  L RHI  H G K F C  C + FS    L  H+RTH GE
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 22 CGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKA 81
          C ++F+   +L  H+ +H G   ++C +C + F +  H+  HI+ H G KP+ C  CG+ 
Sbjct: 12 CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 82 FVRASDLKRHIDAHLGVK 99
          F R+ + KRH   HL  K
Sbjct: 72 FARSDERKRHTKIHLRQK 89

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 71  KPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           +PY C    C + F  +S+L RHI  H G K F C  C + FS    L  H+RTH GE
Sbjct: 3   RPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 22  CGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--CG 79
           C K F    ++  HLH H G   + C  CGK F++   +K H   H G KP+ CT+  CG
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 80  KAFVRASDLKRHIDAHLGVKKFAC--ETCGKLFSSKHGLKYHVRTH 123
           K F    +L+ H+  H G + + C  + C K F+    LK H+ TH
Sbjct: 72  KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 45  YKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFA 102
           Y CP+  C + F Q  ++  HI+ H G KP+ C  C + F + + L  HI  H G K FA
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFA 64
Query: 103 CETCGKLFSSKHGLKYHVRTH 123
           C+ CG+ F++ H    H + H
Sbjct: 65  CDICGRKFATLHTRTRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 45  YKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFA 102
           Y CP+  C + F Q  ++  HI+ H G KP+ C  C + F + + L +HI  H G K FA
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFA 64
Query: 103 CETCGKLFSSKHGLKYHVRTH 123
           C+ CG+ F++ H    H + H
Sbjct: 65  CDICGRKFATLHTRDRHTKIH 85

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 48  PLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACET 105
           P C K + +  H+K H++ H G KPY CT+  C   F R+ +L RH   H G K F C  
Sbjct: 21  PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV 80
Query: 106 CGKLFSSKHGLKYHVRTHKG 125
           C + FS    L  H++ H+ 
Sbjct: 81  CNRSFSRSDHLALHMKRHQN 100

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 41  GSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGV-- 98
           GSS   C +CGK F  + H+  H  +H G KPY C  CG  F R   +  H+ +H G   
Sbjct: 4   GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG 63
Query: 99  KKFACETCGKLFSSKHGLKYHVR 121
           K + C++CGK FS    L  H++
Sbjct: 64  KPYICQSCGKGFSRPDHLNGHIK 86

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          Y C +CGK FT K   + H+ +H G   Y C +CGK F    H+  H++ H G+KPY C 
Sbjct: 11 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 77 YCGKAFVRASDLKRHIDA 94
           C K F+      RH+ +
Sbjct: 70 ICAKRFMWRDSFHRHVTS 87

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 69  GLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKG 125
           G K Y C  CGK+F   S   RH+  HLG++ + C  CGK F  KH L  H++ H G
Sbjct: 7   GDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 50  CGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCG 107
           CGK + +  H+K H++ H G KPY C +  CG  F R+ +L RH   H G + F C+ C 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 108 KLFSSKHGLKYHVRTH 123
           + FS    L  H++ H
Sbjct: 73  RAFSRSDHLALHMKRH 88

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 50  CGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCG 107
           CGK + +  H+K H++ H G KPY C +  CG  F R+ +L RH   H G + F C+ C 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 108 KLFSSKHGLKYHVRTH 123
           + FS    L  H++ H
Sbjct: 74  RAFSRSDHLALHMKRH 89

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 11  ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQ---AH 67
           ++ +S  +C  C K+F  K+ L  H   H G   ++CP CGK + +  ++ +H      +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 68  GGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYH-VRTHKG 125
              + + C+ C + F R  +L+ H+ +H G   + C +C + F  K  L+ H ++ H G
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 18  QCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVC 75
           +C   GK F  K+ L  H+ VH G   + CP   CGK F +  ++K H + H G KP+ C
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC 123
Query: 76  TY--CGKAFVRASDLKRHIDAHLGVK 99
            +  C + F  +SD K+H+  H   K
Sbjct: 124 EFEGCDRRFANSSDRKKHMHVHTSDK 149

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 42  SSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKF 101
           S  +KC +CGK F +   +K H++ H G+KPY C  C  A   +S L +H+  H   + F
Sbjct: 6   SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF 65
Query: 102 ACETCGKLFSSKHGLKYHVRTHKGE 126
            C+ C     +   L  H+R+H G+
Sbjct: 66  KCQICPYASRNSSQLTVHLRSHTGD 90

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 24  KQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCTY--CG 79
           + F  ++ L  H+  H G   +KC    C K + +L ++K H+++H G KPY+C +  C 
Sbjct: 47  RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCS 106
Query: 80  KAFVRASDLKRHID-AHLGVKKFACET--CGKLFSSKHGLKYHVRT 122
           KAF  ASD  +H +  H   K + C+   C K ++    L+ HV+T
Sbjct: 107 KAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 42/88 (47%)
Query: 11 ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGL 70
          + T   + C  CG+ FT+ ++L  H   H     Y C +C K F +  H++DH   H   
Sbjct: 12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKE 71
Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHLGV 98
          KP+ C  CGK F ++  L  H   H+  
Sbjct: 72 KPFKCQECGKGFCQSRTLAVHKTLHMQT 99

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 30/53 (56%)
Query: 71  KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
           KPY C  CGKAF R+S L +H   H G K + C  CGK FS   GL  H R H
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 30/56 (53%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKP 72
          Y+C ECGK F+    L+ H   H G   YKC  CGK FIQ  H+  H + H G  P
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 73  YVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKG 125
           Y C  CGK+F  +SDL +H   H G K + C+ CGK F  +  L  H R H G
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 71  KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           +P+ C +CGK +  AS L RH  AHLG +  +C  CGK F  +  +  H++ H+ +
Sbjct: 3   RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK 58

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 70  LKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
           ++PY C    C + F R+ +L RHI  H G K F C  C + FS    L  H+RTH
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 39/82 (47%)
Query: 41  GSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKK 100
           G   Y C +C + ++ L  ++ H   H   K Y C YC K F  A    +H   H G ++
Sbjct: 19  GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR 78
Query: 101 FACETCGKLFSSKHGLKYHVRT 122
           + C  CGK F +   +  H+++
Sbjct: 79  YQCLACGKSFINYQFMSSHIKS 100

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 41 GSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAH 95
          GSS+ +C  CGKFF    ++  H++ H G KPY C +C  A  + + L+ H++ H
Sbjct: 1  GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 75  CTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
           C+YCGK F     L  H+  H G K + CE C    + K  L+YH+  H
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 45 YKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHID 93
          ++C +C + F +  H+  HI+ H G KP+ C  CG+ F R+ + KRH D
Sbjct: 4  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD 52

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 52/124 (41%), Gaps = 10/124 (8%)
Query: 12  TTTSAYQCGE--CGKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAH 67
           T    + C E  C K FT    L  H   H G  N+ C    C   F    +MK H    
Sbjct: 38  TGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97
Query: 68  GGLK--PYVCTY--CGKAFVRASDLKRHIDAHLGVKKFAC--ETCGKLFSSKHGLKYHVR 121
             +K   YVC +  CGKAF + + LK H  +H     + C  E C K FS    LK H +
Sbjct: 98  HNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK 157
Query: 122 THKG 125
            H G
Sbjct: 158 VHAG 161

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 71  KPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFAC--ETCGKLFSSKHGLKYHVRTHKGE 126
           K Y+C++  CG A+ +   L+ H+  H G K F C  E C K F+S H L  H  TH GE
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 26/56 (46%)
Query: 71  KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           KPY C  C  +F    +L  H   H G K + C  CG  F+    LK H R H GE
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE 71

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 48 PLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAH 95
          P CGK + +  H+K H + H G KP+ C++  C + F R+ +L RH   H
Sbjct: 23 PGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 71  KPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFAC--ETCGKLFSSKHGLKYHVRTHKGE 126
           K Y+C++  CG A+ +   L+ H+  H G K F C  E C K F+S H L  H  TH GE
Sbjct: 2   KRYICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 61

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 44 NYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRH 91
          ++ C +C + F +  H+K H ++H   KPY C  C +AF R   L RH
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	129
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-27
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-27
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-27
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-27
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-27
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-27
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	8e-23
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-21
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-24
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-23
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-22
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-23
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-22
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-19
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-22
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-21
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-16
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-20
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-19
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-19
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-19
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-16
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-14
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-15
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	9e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-14
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-13
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-14
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-14
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-14
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-12
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-10
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	7e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-09
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-08
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	7e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	9e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	6e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	8e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	6e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	4e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	1e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	1e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	8e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 99.8 bits (250), Expect = 1e-27
 Identities = 51/110 (46%), Positives = 64/110 (58%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
           Y+C ECGK F+++ +L AH   H G   Y CP CGK F QL H++ H + H G KPY C 
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP 137

Query: 77  YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
            CGK+F R  +L  H   H G K + C  CGK FS +  L  H RTH G+
Sbjct: 138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGK 187

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 99.4 bits (249), Expect = 1e-27
 Identities = 50/110 (45%), Positives = 60/110 (54%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
           Y C ECGK F+R   L  H   H G   YKCP CGK F     +  H + H G KPY C 
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81

Query: 77  YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
            CGK+F + ++L+ H   H G K +AC  CGK FS    L+ H RTH GE
Sbjct: 82  ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE 131

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 99.1 bits (248), Expect = 2e-27
 Identities = 50/110 (45%), Positives = 62/110 (56%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
           Y+C ECGK F+ K  L  H   H G   YKCP CGK F Q  +++ H + H G KPY C 
Sbjct: 50  YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACP 109

Query: 77  YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
            CGK+F + + L+ H   H G K + C  CGK FS +  L  H RTH GE
Sbjct: 110 ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE 159

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 84.0 bits (209), Expect = 1e-21
 Identities = 42/101 (41%), Positives = 51/101 (50%)

Query: 26  FTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRA 85
                S  A   +  G   Y CP CGK F +  H+ +H + H G KPY C  CGK+F   
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 86  SDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
            DL RH   H G K + C  CGK FS +  L+ H RTH GE
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE 103

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 50.5 bits (122), Expect = 7e-09
 Identities = 24/56 (42%), Positives = 32/56 (57%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKP 72
           Y+C ECGK F+R+ +L+ H   H G   YKCP CGK F +   +  H + H G K 
Sbjct: 134 YKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 96.4 bits (241), Expect = 3e-27
 Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 17  YQCG--ECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYV 74
             C    C K F    ++  HLH H G   + C  CGK F++   +K H   H G KP+ 
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64

Query: 75  CTY--CGKAFVRASDLKRHIDAHLGVKKFACET--CGKLFSSKHGLKYHVRTHKGE 126
           CT+  CGK F    +L+ H+  H G + + C    C K F+    LK H+ TH   
Sbjct: 65  CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 120

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 75.6 bits (187), Expect = 6e-19
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYV 74
           + C ECGK F     L  H  VH G   ++C    CGK F    +++ H++ H G +PYV
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV 94

Query: 75  CTY--CGKAFVRASDLKRHIDAHLGVKKF 101
           C +  C K F ++++LK HI  H   K  
Sbjct: 95  CPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 96.4 bits (241), Expect = 4e-27
 Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 4/114 (3%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDH---IQAHGGLKPY 73
            +C  C K+F  K+ L  H   H G   ++CP CGK + +  ++ +H      +   + +
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 74  VCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYH-VRTHKGE 126
            C+ C + F R  +L+ H+ +H G   + C +C + F  K  L+ H ++ H G 
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 78.3 bits (194), Expect = 4e-20
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)

Query: 39  HYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRH---IDAH 95
             GSS  +CP C K F+   ++K H + H G KP+ C  CGK + R  +L  H      +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 96  LGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              + F C  C + F  +  L+ H+ +H GE
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSHTGE 92

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 56.7 bits (138), Expect = 1e-11
 Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 66  AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVR---T 122
              G     C  C K F+    LK H   H G K F C  CGK +  K  L  H      
Sbjct: 1   GSSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 123 HKGE 126
           ++ E
Sbjct: 61  NRSE 64

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 96.0 bits (240), Expect = 4e-27
 Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 6/113 (5%)

Query: 17  YQCGE--CGKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKP 72
           + C    C K++ +   L  H   H G   Y+C    C + F +   +K H + H G+KP
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 73  YVCTYCGKAFVRASDLKRHIDAHLGVKKFACET--CGKLFSSKHGLKYHVRTH 123
           + C  C + F R+  LK H   H G K F+C    C K F+    L  H   H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 85.3 bits (212), Expect = 8e-23
 Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 4/86 (4%)

Query: 45  YKC--PLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKK 100
           + C  P C K + +L H++ H + H G KPY C +  C + F R+  LKRH   H GVK 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 101 FACETCGKLFSSKHGLKYHVRTHKGE 126
           F C+TC + FS    LK H RTH GE
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGE 92

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 94.3 bits (235), Expect = 5e-26
 Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 13/123 (10%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYK---------CPLCGKFFIQLCHMKDHIQAH 67
                C + F+    L  H+ + +     +         CP  GK F     + +HI+ H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 68  GGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACET--CGKLFSSKHGLKYHVRTH 123
            G KP+ C +  CGK F R+ +LK H   H G K F CE   C + F++    K H+  H
Sbjct: 86  TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

Query: 124 KGE 126
             +
Sbjct: 146 TSD 148

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 82.3 bits (204), Expect = 3e-21
 Identities = 30/118 (25%), Positives = 40/118 (33%), Gaps = 11/118 (9%)

Query: 20  GECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYV----- 74
           G  G          +   +     +     C + F  +  +  H+       P       
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 75  ----CTYCGKAFVRASDLKRHIDAHLGVKKFAC--ETCGKLFSSKHGLKYHVRTHKGE 126
               C   GK+F     L  HI  H G K F C    CGK+F+    LK H RTH GE
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGE 118

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 76.6 bits (189), Expect = 4e-19
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYV 74
            +C   GK F  K+ L  H+ VH G   + CP   CGK F +  ++K H + H G KP+ 
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 75  CTY--CGKAFVRASDLKRHIDAHLGVKKFAC 103
           C +  C + F  +SD K+H+  H   K    
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 52.3 bits (126), Expect = 1e-09
 Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 17  YQC--GECGKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKP 72
           + C    CGK F R  +L  H   H G   +KC    C + F      K H+  H   K 
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS 150

Query: 73  YVCT 76
              +
Sbjct: 151 GPSS 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 91.5 bits (228), Expect = 6e-25
 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 13/123 (10%)

Query: 17  YQCGECGKQFTRKFSLNAHL---HVHYGSSNYKCPLCG-----KFFIQLCHMKDHIQAHG 68
            +   C ++F  +  L  H+   H+H     + C   G     + F     +  H++ H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 69  GLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACE--TCGKLFSSKHGLKYH-VRTH 123
           G KP+ CT+  C K++ R  +LK H+ +H G K + CE   C K FS+      H  RTH
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 124 KGE 126
             E
Sbjct: 124 SNE 126

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 90.0 bits (224), Expect = 2e-24
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 12/121 (9%)

Query: 17  YQCGECG-----KQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGG 69
           + C   G     + F  ++ L  H+  H G   +KC    C K + +L ++K H+++H G
Sbjct: 35  FVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG 94

Query: 70  LKPYVCTY--CGKAFVRASDLKRHID-AHLGVKKFACET--CGKLFSSKHGLKYHVRTHK 124
            KPY+C +  C KAF  ASD  +H +  H   K + C+   C K ++    L+ HV+T  
Sbjct: 95  EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

Query: 125 G 125
           G
Sbjct: 155 G 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 55.3 bits (134), Expect = 7e-11
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 8/64 (12%)

Query: 71  KPYVCTYCGKAFVRASDLKRHIDA---HLGVKKFACETCG-----KLFSSKHGLKYHVRT 122
                  C + F     L  HI++   H   K+F C   G     + F +++ L  H+R 
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 123 HKGE 126
           H GE
Sbjct: 62  HTGE 65

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 87.1 bits (217), Expect = 1e-23
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
           Y C +CGK FT K   + H+ +H G   Y C +CGK F    H+  H++ H G+KPY C 
Sbjct: 11  YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69

Query: 77  YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGL 116
            C K F+      RH+      K +      +  +   G 
Sbjct: 70  ICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 69.0 bits (170), Expect = 1e-16
 Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 3/89 (3%)

Query: 38  VHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLG 97
              G   Y C  CGK F        H+  H GL+PY C  CGK F     L  H+  H G
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62

Query: 98  VKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           +K + C  C K F  +     H       
Sbjct: 63  IKPYECNICAKRFMWRDSF--HRHVTSCT 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 85.2 bits (212), Expect = 3e-23
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 45  YKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFA 102
           Y CP+  C + F Q   +  HI+ H G KP+ C  C + F R+  L  HI  H G K FA
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 103 CETCGKLFSSKHGLKYHVRTHKGE 126
           C+ CG+ F+     K H + H  +
Sbjct: 65  CDICGRKFARSDERKRHTKIHLRQ 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 81.7 bits (203), Expect = 8e-22
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)

Query: 17 YQCG--ECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYV 74
          Y C    C ++F++  SL  H+ +H G   ++C +C + F +  H+  HI+ H G KP+ 
Sbjct: 5  YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 75 CTYCGKAFVRASDLKRHIDAHLGVK 99
          C  CG+ F R+ + KRH   HL  K
Sbjct: 65 CDICGRKFARSDERKRHTKIHLRQK 89

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 88.0 bits (219), Expect = 4e-23
 Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 10/120 (8%)

Query: 17  YQC--GECGKQFTRKFSLNAHLHVHYGSSNYKC--PLCGKFFIQLCHMKDHIQAHGGLKP 72
           Y C   +CG  + + + L AHL  H G   + C    C K F  L H+  H   H G K 
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72

Query: 73  YVCT--YCGKAFVRASDLKRHIDAHLGVKKF----ACETCGKLFSSKHGLKYHVRTHKGE 126
           + C    C   F   +++K+H +    +K        E CGK F   + LK H  +H  +
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 86.5 bits (215), Expect = 1e-22
 Identities = 41/120 (34%), Positives = 51/120 (42%), Gaps = 10/120 (8%)

Query: 17  YQCGE--CGKQFTRKFSLNAHLHVHYGSSNYKC--PLCGKFFIQLCHMKDHIQAHGGLK- 71
           + C E  C K FT    L  H   H G  N+ C    C   F    +MK H      +K 
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKI 102

Query: 72  -PYVCTY--CGKAFVRASDLKRHIDAHLGVKKFAC--ETCGKLFSSKHGLKYHVRTHKGE 126
             YVC +  CGKAF + + LK H  +H     + C  E C K FS    LK H + H G 
Sbjct: 103 CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 162

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 76.5 bits (189), Expect = 9e-19
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 9/117 (7%)

Query: 17  YQCGE--CGKQFTRKFSLNAHLHVHYG--SSNYKCPL--CGKFFIQLCHMKDHIQAHGGL 70
           + C    C  +FT K ++  H +  +      Y C    CGK F +   +K H  +H   
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132

Query: 71  KPYVCT--YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSK-HGLKYHVRTHK 124
            PY C    C K F   S LKRH   H G      ++C  +  +    LK+    H+
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 63  HIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACE--TCGKLFSSKHGLKY 118
                   K Y+C++  CG A+ +   L+ H+  H G K F C+   C K F+S H L  
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 119 HVRTHKGE 126
           H  TH GE
Sbjct: 63  HSLTHTGE 70

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 81.8 bits (203), Expect = 6e-22
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 45  YKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
           ++C +C + F +  H+  HI+ H G KP+ C  CG+ F R+ + KRH D    +     +
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILED 62

Query: 105 TCGKLFSSKHGLKYHV---RTHKGE 126
              +L S  + L+  V   +   GE
Sbjct: 63  KVEELLSKNYHLENEVARLKKLVGE 87

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 61.7 bits (151), Expect = 6e-14
 Identities = 20/54 (37%), Positives = 27/54 (50%)

Query: 70  LKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
           +KP+ C  C + F R+  L  HI  H G K FAC+ CG+ F+     K H    
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 7/49 (14%), Positives = 17/49 (34%), Gaps = 1/49 (2%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQ 65
          + C  CG++F R      H  +             +   +  H+++ + 
Sbjct: 32 FACDICGRKFARSDERKRHRDIQ-HILPILEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 98  VKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           +K F C  C + FS    L  H+RTH GE
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGE 29

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 80.4 bits (199), Expect = 3e-21
 Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 6/100 (6%)

Query: 26  FTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFV 83
                       +HY       P C K + +  H+K H++ H G KPY CT+  C   F 
Sbjct: 3   SGSSGPDLEKRRIHYCD----YPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 84  RASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
           R+ +L RH   H G K F C  C + FS    L  H++ H
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 49.5 bits (119), Expect = 4e-09
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 71  KPYVCT--YCGKAFVRASDLKRHIDAHLGVKKFAC--ETCGKLFSSKHGLKYHVRTHKGE 126
           + + C    C K + ++S LK H+  H G K + C  E C   F+    L  H R H G 
Sbjct: 14  RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 46.1 bits (110), Expect = 8e-08
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 17 YQCG--ECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAH 67
          Y+C    C  +F R   L  H   H G+  ++C +C + F +  H+  H++ H
Sbjct: 46 YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 79.9 bits (198), Expect = 4e-21
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 39  HYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHL 96
              +       CGK + +  H+K H++ H G KPY C +  CG  F R+ +L RH   H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 97  GVKKFACETCGKLFSSKHGLKYHVRTH 123
           G + F C+ C + FS    L  H++ H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 67.2 bits (165), Expect = 4e-16
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC--PLCGKFFIQLCHMKDHIQAHGGLKPYV 74
               CGK +T+   L AHL  H G   Y C    CG  F +   +  H + H G +P+ 
Sbjct: 8  CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67

Query: 75 CTYCGKAFVRASDLKRHIDAHL 96
          C  C +AF R+  L  H+  H 
Sbjct: 68 CQKCDRAFSRSDHLALHMKRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 67  HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC--ETCGKLFSSKHGLKYHVRTHK 124
                      CGK + ++S LK H+  H G K + C  + CG  F+    L  H R H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 125 GE 126
           G 
Sbjct: 62  GH 63

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 79.0 bits (196), Expect = 1e-20
 Identities = 29/88 (32%), Positives = 45/88 (51%)

Query: 39  HYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGV 98
              S  +KC +CGK F +   +K H++ H G+KPY C  C  A   +S L +H+  H   
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 99  KKFACETCGKLFSSKHGLKYHVRTHKGE 126
           + F C+ C     +   L  H+R+H G+
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSHTGD 90

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 78.6 bits (195), Expect = 1e-20
 Identities = 26/87 (29%), Positives = 39/87 (44%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
           ++C  CGK F+RK  L  H+  H G   YKC  C         +  H++ H   +P+ C 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 77  YCGKAFVRASDLKRHIDAHLGVKKFAC 103
            C  A   +S L  H+ +H G    + 
Sbjct: 69  ICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 78.6 bits (195), Expect = 2e-20
 Identities = 27/96 (28%), Positives = 37/96 (38%)

Query: 31  SLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKR 90
             +           + C  CG+ F +  ++  H + H   +PY C  C KAF R   L+ 
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 91  HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           H   H   K F C+ CGK F     L  H   H   
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQT 99

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 76.3 bits (189), Expect = 2e-19
 Identities = 27/89 (30%), Positives = 41/89 (46%)

Query: 17  YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
           + C  CG+ FT+ ++L  H   H     Y C +C K F +  H++DH   H   KP+ C 
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77

Query: 77  YCGKAFVRASDLKRHIDAHLGVKKFACET 105
            CGK F ++  L  H   H+        +
Sbjct: 78  ECGKGFCQSRTLAVHKTLHMQTSSPTAAS 106

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 37.4 bits (88), Expect = 2e-04
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 86  SDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           S            K+F C+ CG+ F+  + L  H RTH  E
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDE 43

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 75.5 bits (187), Expect = 2e-19
 Identities = 33/81 (40%), Positives = 43/81 (53%)

Query: 45  YKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
           + C +CGK F +   +  H+  H   +PY C YCGK F + SD+K+H   H G K   C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 105 TCGKLFSSKHGLKYHVRTHKG 125
            CGK FS    L  H R H G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 75.5 bits (187), Expect = 2e-19
 Identities = 35/82 (42%), Positives = 45/82 (54%)

Query: 16 AYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVC 75
          ++ C  CGK F R  +L+ HL +H  +  Y C  CGK F Q   MK H   H G KP+ C
Sbjct: 1  SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 76 TYCGKAFVRASDLKRHIDAHLG 97
            CGKAF ++S+L  H   H G
Sbjct: 61 QVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 52.0 bits (126), Expect = 3e-10
 Identities = 21/54 (38%), Positives = 29/54 (53%)

Query: 73  YVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           + C  CGK+F R+S L  H+  H   + + C+ CGK F  K  +K H   H GE
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGE 55

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 75.2 bits (186), Expect = 4e-19
 Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGG--LKPYV 74
            C  CGK F   + LN H   H G   Y CP+CG  F +   M  H+++H G   KPY+
Sbjct: 8  VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 75 CTYCGKAFVRASDLKRHI 92
          C  CGK F R   L  HI
Sbjct: 68 CQSCGKGFSRPDHLNGHI 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 74.1 bits (183), Expect = 9e-19
 Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 39  HYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLG- 97
             GSS   C +CGK F  + H+  H  +H G KPY C  CG  F R   +  H+ +H G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 98  -VKKFACETCGKLFSSKHGLKYHV-RTHKGE 126
             K + C++CGK FS    L  H+ + H G 
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 66.7 bits (164), Expect = 6e-16
 Identities = 23/64 (35%), Positives = 29/64 (45%)

Query: 66  AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKG 125
              G     C  CGK F     L RH  +H G K ++C  CG  F  K  + YHVR+H G
Sbjct: 1   GSSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 126 ECKR 129
              +
Sbjct: 61  SVGK 64

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 67.9 bits (167), Expect = 2e-16
 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 4/84 (4%)

Query: 31  SLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGG----LKPYVCTYCGKAFVRAS 86
           S  +    H G   Y C  C K F Q   +  H + +         +VC+ CGK F R +
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 87  DLKRHIDAHLGVKKFACETCGKLF 110
            + RH D   G      E  G   
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 66.8 bits (164), Expect = 6e-16
 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSN----YKCPLCGKFFIQLCHMKDHIQAHGGLKP 72
          Y C  C K F +K  L+ H   ++  +     + C  CGK F +   M  H     G   
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75

Query: 73 YVCTYCGKAF 82
                G + 
Sbjct: 76 VEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 59.1 bits (144), Expect = 6e-13
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 4/72 (5%)

Query: 59  HMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLG----VKKFACETCGKLFSSKH 114
                 + H G KPY C++C K F +   L  H   +         F C  CGK F+ ++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 115 GLKYHVRTHKGE 126
            +  H     G 
Sbjct: 62  TMARHADNCAGP 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 67.2 bits (165), Expect = 3e-16
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 59  HMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLG--VKKFACETCGKLFSSKHGL 116
                 + H G KPY C  C   F ++  +K HI       V KF C  C  + + K  L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 117 KYHVRT-HKGE 126
             H+R  H   
Sbjct: 62  GVHLRKQHSYS 72

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.9 bits (141), Expect = 1e-12
 Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSN--YKCPLCGKFFIQLCHMKDHIQ-AHGGLKPY 73
          Y+C  C  +FT+  ++  H+   +  +   + CP C     +   +  H++  H    P 
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 9/42 (21%), Positives = 13/42 (30%)

Query: 88  LKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR 129
                  H G K + C  C   F+    +K H+     E   
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVA 44

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 65.7 bits (161), Expect = 8e-16
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 67  HGGLKPYVCTYCGKAFVRASDLKRH--IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHK 124
             G   Y C  C + +   S+  RH        VK + C  C K F+ K  +  HV+   
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

Query: 125 G 125
            
Sbjct: 65  K 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 61.0 bits (149), Expect = 5e-14
 Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 39 HYGSSNYKCPLCGKFFIQLCHMKDH--IQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHL 96
            G   Y+C +C + +  + +   H        +K Y C +C K F R  ++  H+    
Sbjct: 5  KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

Query: 97 GV 98
           +
Sbjct: 65 KI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.6 bits (127), Expect = 1e-10
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 17 YQCGECGKQFTRKFSLNAHL--HVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGL 70
          Y+C  C + +T   +   H           Y CP C K F +  +M  H++    +
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 65.3 bits (160), Expect = 2e-15
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 5/84 (5%)

Query: 45  YKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKK 100
           Y C    CGK F +   +K H  +H    PY C +  C K F   S LKRH   H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 101 FACETCGKLFS-SKHGLKYHVRTH 123
              ++C  +       LK+    H
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 53.4 bits (129), Expect = 9e-11
 Identities = 18/76 (23%), Positives = 25/76 (32%), Gaps = 2/76 (2%)

Query: 19 CGECGKQFTRKFSLNAHLHVHYGSSNYKC--PLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
             CGK F +   L  H   H     Y+C    C K F     +K H + H G       
Sbjct: 6  FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65

Query: 77 YCGKAFVRASDLKRHI 92
           C       +   +H+
Sbjct: 66 SCSFVGKTWTLYLKHV 81

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 49.5 bits (119), Expect = 2e-09
 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 73  YVCTY--CGKAFVRASDLKRHIDAHLGVKKFAC--ETCGKLFSSKHGLKYHVRTHKGE 126
           YVC +  CGKAF + + LK H  +H     + C  E C K FS    LK H + H G 
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 59

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 62.9 bits (154), Expect = 1e-14
 Identities = 24/68 (35%), Positives = 28/68 (41%)

Query: 59  HMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKY 118
           H   H       KPY C  C  +F    +L  H   H G K + C  CG  F+    LK 
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 119 HVRTHKGE 126
           H R H GE
Sbjct: 64  HTRIHSGE 71

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 57.5 bits (140), Expect = 2e-12
 Identities = 24/69 (34%), Positives = 31/69 (44%)

Query: 31 SLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKR 90
            + H H+ +    YKC  C   F    ++  H   H G KPY C  CG  F R ++LK 
Sbjct: 4  HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 91 HIDAHLGVK 99
          H   H G K
Sbjct: 64 HTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 55.2 bits (134), Expect = 1e-11
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPY 73
          Y+C  C   F  K +L +H  VH G   Y+C +CG  F +  ++K H + H G KPY
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 37.4 bits (88), Expect = 9e-05
 Identities = 11/41 (26%), Positives = 13/41 (31%)

Query: 86  SDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
                H       K + C+ C   F  K  L  H   H GE
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGE 43

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 63.0 bits (154), Expect = 1e-14
 Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 39  HYGSSNYKCPL--CGKFFIQLCHMKDHI-QAHGGLKPYVCTY--CGKAFVRASDLKRHID 93
             GSS   C    CG+ F    ++  H    H   K + C    CGK+F     LK H+ 
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 94  AHLGVKKFACETCGKLF 110
            H   + + CE  G   
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 59.9 bits (146), Expect = 2e-13
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 17 YQC--GECGKQFTRKFSLNAHLHV-HYGSSNYKCP--LCGKFFIQLCHMKDHIQAHGGLK 71
            C    CG+ F+ +  LN H    H    ++ CP   CGK F    H+K+H++ H   +
Sbjct: 8  MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 72 PYVCTYCGKAF 82
           Y+C + G + 
Sbjct: 68 DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 59.9 bits (146), Expect = 3e-13
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 5/66 (7%)

Query: 66  AHGGLKPYVCTY--CGKAFVRASDLKRHI-DAHLGVKKFACE--TCGKLFSSKHGLKYHV 120
              G     C +  CG+ F     L  H    H+  K F+C    CGK F+ K  LK H+
Sbjct: 1   GSSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM 60

Query: 121 RTHKGE 126
           + H   
Sbjct: 61  KLHSDT 66

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 61.9 bits (151), Expect = 3e-14
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)

Query: 59  HMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGL 116
           ++ +++     ++PY C    C + F R+ +L RHI  H G K F C  C + FS    L
Sbjct: 8   NLLNYV--VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHL 65

Query: 117 KYHVRTH 123
             H+RTH
Sbjct: 66  TTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 50.4 bits (121), Expect = 8e-10
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 33 NAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKR 90
          N   +V      Y CP+  C + F +   +  HI+ H G KP+ C  C + F R+  L  
Sbjct: 8  NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67

Query: 91 HIDAH 95
          HI  H
Sbjct: 68 HIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.4 bits (108), Expect = 7e-08
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 17 YQCG--ECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAH 67
          Y C    C ++F+R   L  H+ +H G   ++C +C + F +  H+  HI+ H
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 61.0 bits (149), Expect = 7e-14
 Identities = 12/60 (20%), Positives = 20/60 (33%)

Query: 67  HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
                P  C+ C  +    + L+ H   H   + F C  C         L  H++   G+
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 55.2 bits (134), Expect = 1e-11
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 38  VHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLG 97
                   KC  C         ++ H + H   +P+ C YC     + S+L +H+    G
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

Query: 98  VKKFACETCG 107
               +  + G
Sbjct: 63  DM--SGPSSG 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 54.0 bits (131), Expect = 3e-11
 Identities = 13/57 (22%), Positives = 22/57 (38%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPY 73
           +C EC    + K +L  H  +H     +KC  C     Q  ++  H++   G    
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG 66

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 60.9 bits (148), Expect = 8e-14
 Identities = 15/65 (23%), Positives = 20/65 (30%), Gaps = 3/65 (4%)

Query: 67  HGGLKPYVCTYCGKAFVRASDLKRHIDAH---LGVKKFACETCGKLFSSKHGLKYHVRTH 123
             G     C  CG    + + L  H   H   +   +F CE CGK F     +  H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 124 KGECK 128
                
Sbjct: 62  HPALL 66

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 58.2 bits (141), Expect = 9e-13
 Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 3/67 (4%)

Query: 45  YKCPLCGKFFIQLCHMKDHIQAH---GGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKF 101
            +C +CG    Q   +  H + H        + C +CGK F +   +  H          
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 102 ACETCGK 108
           A +    
Sbjct: 68  APQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 35.8 bits (83), Expect = 3e-04
 Identities = 8/36 (22%), Positives = 14/36 (38%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGK 52
          + C  CGK+F +  S+ AH    + +          
Sbjct: 39 FPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 60.6 bits (148), Expect = 1e-13
 Identities = 29/60 (48%), Positives = 32/60 (53%)

Query: 67  HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           H G KPY C  CGKAF R+S L +H   H G K + C  CGK FS   GL  H R H   
Sbjct: 9   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG 68

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 55.2 bits (134), Expect = 1e-11
 Identities = 24/71 (33%), Positives = 30/71 (42%)

Query: 32  LNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRH 91
            +    +H G   Y C  CGK F +   +  H + H G KPY C  CGKAF + S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 92  IDAHLGVKKFA 102
              H       
Sbjct: 62  QRIHTSGPSSG 72

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 53.6 bits (130), Expect = 6e-11
 Identities = 23/57 (40%), Positives = 27/57 (47%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPY 73
          Y C ECGK F+R   L  H  VH G   YKC  CGK F Q   + +H + H      
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.5 bits (148), Expect = 1e-13
 Identities = 23/68 (33%), Positives = 30/68 (44%)

Query: 59  HMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKY 118
                       + Y C  CGK+F  +SDL +H   H G K + C+ CGK F  +  L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 119 HVRTHKGE 126
           H R H G 
Sbjct: 65  HHRVHTGS 72

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.4 bits (132), Expect = 3e-11
 Identities = 25/69 (36%), Positives = 29/69 (42%)

Query: 31 SLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKR 90
          S             YKC  CGK F     +  H + H G KPY C  CGKAF++ S L  
Sbjct: 5  SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 91 HIDAHLGVK 99
          H   H G  
Sbjct: 65 HHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.6 bits (130), Expect = 5e-11
 Identities = 25/57 (43%), Positives = 30/57 (52%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPY 73
          Y+C ECGK F+    L+ H   H G   YKC  CGK FIQ  H+  H + H G  P 
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.0 bits (87), Expect = 1e-04
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 86  SDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               R        +++ C+ CGK FS    L  H RTH GE
Sbjct: 4   GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 44

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 59.0 bits (144), Expect = 3e-13
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 71  KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHV-RTHKGEC 127
           + +VC  C +AF R   LKRH  +H   K + C  C + F+ +  L  H  + H G  
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 55.6 bits (135), Expect = 7e-12
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 45 YKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRH 91
          + C +C + F +  H+K H ++H   KPY C  C +AF R   L RH
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 14/49 (28%), Positives = 20/49 (40%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQ 65
          + C  C + F R+  L  H   H     Y C LC + F +   +  H Q
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 54.3 bits (131), Expect = 3e-11
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 59  HMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFAC--ETCGKLFSSKH 114
                      ++ ++C++  CGK + ++S LK H   H G K F+C  + C + F+   
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63

Query: 115 GLKYHVRTH 123
            L  H RTH
Sbjct: 64  ELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 52.4 bits (126), Expect = 1e-10
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 31 SLNAHLHVHYGSSNYKC--PLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRAS 86
            +          ++ C  P CGK + +  H+K H + H G KP+ C++  C + F R+ 
Sbjct: 4  GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63

Query: 87 DLKRHIDAH 95
          +L RH   H
Sbjct: 64 ELSRHRRTH 72

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 52.6 bits (127), Expect = 8e-11
 Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDA-HLGVKKFACETCGKLFSS 112
              +    KPY+C  CGK F R   L  HI   H   +   C+      SS
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 47.6 bits (114), Expect = 7e-09
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 45 YKCPLCGKFFIQLCHMKDHIQA-HGGLKPYVCTYCGKAF 82
          Y C  CGK F +  H+  HI+  H   +P+ C       
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 42.6 bits (101), Expect = 6e-07
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 17 YQCGECGKQFTRKFSLNAHLH-VHYGSSNYKCPLCGKFF 54
          Y C  CGK F+R   LN H+  VH     +KC +     
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 50.9 bits (121), Expect = 4e-10
 Identities = 17/54 (31%), Positives = 26/54 (48%)

Query: 73  YVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           Y+C  CG    + S LK+HI  H  V+ + C  C   F +K  L  H+++    
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 49.3 bits (117), Expect = 2e-09
 Identities = 19/56 (33%), Positives = 29/56 (51%)

Query: 45  YKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKK 100
           Y C  CG    +   +K HI+ H  ++PY CTYC  +F    +L +H+ +    KK
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 48.9 bits (116), Expect = 3e-09
 Identities = 14/55 (25%), Positives = 22/55 (40%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
          Y C ECG +  +   L  H+  H     Y C  C   F    ++  H+++    K
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 52.1 bits (124), Expect = 7e-10
 Identities = 19/99 (19%), Positives = 30/99 (30%), Gaps = 5/99 (5%)

Query: 31  SLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHG-----GLKPYVCTYCGKAFVRA 85
           S   +  +  G+S ++C  C   +  L  +  H+   G       +         +  R 
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 86  SDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHK 124
             L          K   C  CG  F S   L  H+   K
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 50.5 bits (120), Expect = 2e-09
 Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 12 TTTSAYQCGECGKQFTRKFSLNAHLHV--HYGSSNYKCPLCG---KFFIQLCHMKDHIQA 66
          T  S ++C +C   +     L  H++   HY   N++            +   + +    
Sbjct: 15 TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK 74

Query: 67 HGGLKPYVCTYCGKAFVRASDLKRH 91
              K   C YCG +F    DL  H
Sbjct: 75 EDAQKVLKCMYCGHSFESLQDLSVH 99

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 48.1 bits (115), Expect = 4e-09
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 63  HIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KP+ CT+  CG  F R+ +L RH  +H GVK     +
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 49.2 bits (117), Expect = 5e-09
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 9/69 (13%)

Query: 67  HGGLKPYVCTYCGKAFVRASDLKRHI-DAHLGVKKFA--------CETCGKLFSSKHGLK 117
                      C + F    +L  H+   H+G  +          C   GK F +K+ L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 118 YHVRTHKGE 126
            H+R H GE
Sbjct: 80  NHIRVHTGE 88

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 47.7 bits (113), Expect = 2e-08
 Identities = 16/74 (21%), Positives = 24/74 (32%), Gaps = 9/74 (12%)

Query: 12 TTTSAYQCGECGKQFTRKFSLNAHLH-VHYGSSNYK--------CPLCGKFFIQLCHMKD 62
              +     C + F+    L  H+   H G             CP  GK F     + +
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 63 HIQAHGGLKPYVCT 76
          HI+ H G K    +
Sbjct: 81 HIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.0 bits (93), Expect = 2e-05
 Identities = 15/75 (20%), Positives = 22/75 (29%), Gaps = 9/75 (12%)

Query: 38  VHYGSSNYKCPLCGKFFIQLCHMKDHIQ-AHGGLKPYV--------CTYCGKAFVRASDL 88
           +     +     C + F  +  +  H+   H G             C   GK+F     L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 89  KRHIDAHLGVKKFAC 103
             HI  H G K    
Sbjct: 79  VNHIRVHTGEKSGPS 93

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 48.5 bits (115), Expect = 6e-09
 Identities = 17/68 (25%), Positives = 23/68 (33%), Gaps = 7/68 (10%)

Query: 59  HMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKY 118
                 + H G +   C+ CG  F+R S L R        K   CE C K    +  L  
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNK 57

Query: 119 HVRTHKGE 126
                 G+
Sbjct: 58  DEGNESGK 65

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 43.9 bits (103), Expect = 3e-07
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 7/72 (9%)

Query: 31  SLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKR 90
           S      +H G  + KC  CG  FI+   +          K  +C  C K   + + L +
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNK 57

Query: 91  HIDAHLGVKKFA 102
                 G K   
Sbjct: 58  DEGNESGKKTSG 69

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 36.2 bits (83), Expect = 3e-04
 Identities = 12/62 (19%), Positives = 19/62 (30%), Gaps = 7/62 (11%)

Query: 12 TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK 71
              + +C +CG  F R+ +L+             C  C K   Q   +        G K
Sbjct: 14 LGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKDEGNESGKK 66

Query: 72 PY 73
            
Sbjct: 67 TS 68

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.4 bits (109), Expect = 7e-08
 Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 3/81 (3%)

Query: 11 ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGL 70
                YQC  C  + +      +H  +    +   CP C   F      ++H ++    
Sbjct: 11 VENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEH-ESKCEY 67

Query: 71 KPYVCTYCGKAFVRASDLKRH 91
          K   C  C + F  +  + RH
Sbjct: 68 KKLTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.0 bits (95), Expect = 7e-06
 Identities = 19/82 (23%), Positives = 26/82 (31%), Gaps = 3/82 (3%)

Query: 41  GSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKK 100
               Y+C LC      L     H +        VC YC   F      + H ++    KK
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEH-ESKCEYKK 69

Query: 101 FACETCGKLFSSKHGLKYHVRT 122
             C  C + F S   +  H   
Sbjct: 70  LTCLECMRTFKSSFSIWRHQVE 91

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 45.7 bits (107), Expect = 2e-07
 Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 3/106 (2%)

Query: 22  CGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKA 81
             ++  R   L         +         +   +  ++   + +      +VC  C   
Sbjct: 25  TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAI-SQFVCPLCLMP 83

Query: 82  FVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC 127
           F  +  LK+HI      K   C  C K F+S      HV      C
Sbjct: 84  FSSSVSLKQHIRYTEHTKV--CPVCKKEFTSTDSALDHVCKKHNIC 127

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 36.1 bits (82), Expect = 7e-04
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 11  ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQ 65
           +   S + C  C   F+   SL  H+     +    CP+C K F       DH+ 
Sbjct: 69  SKAISQFVCPLCLMPFSSSVSLKQHIRYTEHT--KVCPVCKKEFTSTDSALDHVC 121

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-07
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G +PY C  CGK F R S L  H+  H   K     +
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS 45

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   Y C  CGK F +  H+ +H++ H   K    +
Sbjct: 3  SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y C ECGK F R   L  HL  H+   +   
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 91  HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              +  G K + CE CG  F     LK H+R H G 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGS 37

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.6 bits (96), Expect = 3e-06
 Identities = 14/37 (37%), Positives = 16/37 (43%)

Query: 63 HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVK 99
             + GG KPY C  CG  F     LK H+  H G  
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.2 bits (95), Expect = 4e-06
 Identities = 12/40 (30%), Positives = 16/40 (40%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPY 73
                 G   Y C +CG  F  L  +K H++ H G  P 
Sbjct: 1  GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KP+ C  CG  F  +  L +H+ +H         +
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 5e-05
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 91  HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              +  G K F C+ CG  FS    L  H+R+H+  
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERT 38

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPY 73
                G   YKC  CG  F+Q+ H++ H+  H G  P 
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.2 bits (95), Expect = 4e-06
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 63 HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVK 99
             + GG KPY C  CG  FV+ + L+ H+  H G  
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.7 bits (91), Expect = 1e-05
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 91  HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              +  G K + CETCG  F     L+ HV  H G 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGS 37

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPYVC YCGKAF  +++L RH   H G K    
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   Y C  CGK F     +  H + H G KP   +
Sbjct: 3  SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY+C  CGKAF   S+L +H   H   K     +
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y C  CGK F    ++  H + H   KP   +
Sbjct: 2  SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y C ECGK FT + +L  H  +H        
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 3e-06
 Identities = 15/44 (34%), Positives = 18/44 (40%)

Query: 62  DHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
               +  G KPY C  CGK F+   DL  H   H G K     +
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 45

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK FI    +  H   H G KP   +
Sbjct: 2  SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK F  +  L  H  VH G      
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 4e-06
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +    K + C  CG+ F   S L +H   H G K     +
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS 45

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-06
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KP+ C  CGK+F   S L RH   H   K     +
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS 45

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   +KC +CGK F     +  H   H   KP   +
Sbjct: 2  SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C  CGK F  +  LN H  VH        
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 5e-06
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C  CGKAF+  S L+ H   H G K     +
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y C  CGK FI    +++H + H G KP   +
Sbjct: 2  SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K + CE CGK F     L+ H R H GE
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGE 38

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 12/31 (38%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y C ECGK F     L  H  +H G      
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 5e-06
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KP  CT CGKAF   S L  H   H+  K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.1 bits (79), Expect = 9e-04
 Identities = 10/31 (32%), Positives = 12/31 (38%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
           +C ECGK F  K  L  H   H    +   
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.3 bits (94), Expect = 5e-06
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 71  KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC 106
           K   C  CGK F     L RH  +H G K ++    
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 36.5 bits (84), Expect = 1e-04
 Identities = 12/40 (30%), Positives = 16/40 (40%)

Query: 39 HYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYC 78
                  C +CGK F  + H+  H  +H G KPY     
Sbjct: 7  GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 6e-06
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G + + C+ CGK F++AS+  +H   H G K     +
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 45

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
               +G   ++C  CGKFF+Q  +   H + H G KP   +
Sbjct: 3  SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 6e-06
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G+KPYVC  CGKAF   S L  H   H G    + 
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.5 bits (83), Expect = 2e-04
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G+K + C  CGK F SK  L  H RTH GE
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGE 38

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 7e-06
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G K Y C  CGK+F RA  L +H   H G K    
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y C  CGK F +   +  H + H G KP   +
Sbjct: 2  SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y C ECGK F+R   L  H  +H G      
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.4 bits (93), Expect = 8e-06
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G+KPY C+ C K F   S L  H  +H GVK     +
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS 45

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  GVK + C  C K FS K  L  H R+H G 
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGV 38

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y C  C K F     +  H ++H G+KP   +
Sbjct: 2  SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 34.0 bits (79), Expect = 9e-04
 Identities = 10/31 (32%), Positives = 12/31 (38%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y C +C K F+ K  L  H   H G      
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 8e-06
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY+C  CGK+F++ S L RH   H G K     
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y C  CGK FIQ  H+  H + H G KP   +
Sbjct: 2  SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y C ECGK F +K  LN H  +H G      
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 9e-06
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C  CGKAFV ++ L +H+  H         +
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 10/42 (23%), Positives = 16/42 (38%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   Y C +CGK F+   H+  H++ H        +
Sbjct: 3  SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 9e-06
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY C+ CGKAF R + L  H   H G +     
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   YKC  CGK F +  H+ +H + H G +P   +
Sbjct: 3  SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK F R   LN H  +H G      
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 9e-06
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C+ CGKAF   S L  H+  H G K     +
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS 45

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 9e-05
 Identities = 17/37 (45%), Positives = 20/37 (54%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K + C  CGK FSSK  L  H+RTH GE
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGE 38

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y C  CGK F    ++  H++ H G KP   +
Sbjct: 2  SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.1 bits (79), Expect = 8e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y C ECGK F+ K  L  H+  H G      
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 9e-06
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G + Y C+ CGKAF R S L  H   H G K     +
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK F RK +L  H  +H G      
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G  +Y+C  CGK F +   +  H + H G KP   +
Sbjct: 3  SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C  CGKAF  +S L +H   H G +     +
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   YKC +CGK F    H+  H   H G +P   +
Sbjct: 3  SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G +PY+CT CGKAF   S+L +H   H G K    
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVC 75
          +      G   Y C +CGK F    ++  H + H G KP   
Sbjct: 2  SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y C  CGK FT + +L  H  +H G      
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 13/41 (31%), Positives = 15/41 (36%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G  PY C  CGK F R   L  H   H G    + 
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK F+RK  L +H   H G S    
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 34.0 bits (79), Expect = 9e-04
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 91  HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              +  G   + C  CGK+FS K  L  H +TH G+
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQ 38

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCG 107
              +  G KP+ C  CGK F   S    H  +H G K       G
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 4e-05
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCG 79
          +      G   +KC  CGK F        H ++H G KP   +  G
Sbjct: 2  SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G K + C  CGK F   S L+ H   H+G K     +
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS 45

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 34.1 bits (79), Expect = 9e-04
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 91  HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              +  G K   C+ CGK F     L+ H R H GE
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGE 38

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY C  CGK+F  AS L +H   H G K     
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y C  CGK F     +  H + H G KP   +
Sbjct: 2  SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 34.5 bits (80), Expect = 6e-04
 Identities = 12/31 (38%), Positives = 12/31 (38%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y C ECGK F     L  H  VH G      
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 34.5 bits (80), Expect = 6e-04
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K + C+ CGK F     L  H R H GE
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGE 38

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KP+ C  CGK+F  +S L  H   H G K     +
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   ++C  CGK F     +  H + H G KP   +
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C ECGK F+    L  H  +H G      
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 14/37 (37%), Positives = 16/37 (43%)

Query: 67  HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
             G  PY C+ CGKAF R   L  H   H G    + 
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK F RK  L +H   H G S    
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.7 bits (91), Expect = 1e-05
 Identities = 16/40 (40%), Positives = 19/40 (47%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFA 102
              + GG KPY C  CGKAF +   L  HI  H G    +
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.2 bits (87), Expect = 6e-05
 Identities = 13/40 (32%), Positives = 16/40 (40%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPY 73
                 G   Y+C  CGK F Q   +  HI+ H G  P 
Sbjct: 1  GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.0 bits (84), Expect = 1e-04
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 91  HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              +  G K + C+ CGK FS K  L  H+R H G 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGS 37

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 62  DHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
               +  G KPY C  CGK + R  DL  H   H G K    
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK + +   +  H + H G K    +
Sbjct: 2  SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK + R+  L+ H  VH G      
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 16/44 (36%), Positives = 19/44 (43%)

Query: 62  DHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
               +  G KPY C  CGKAF   S+L  H   H G K     +
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVC 75
          +      G   Y+C  CGK F    ++  H + H G KP   
Sbjct: 2  SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK FT + +L  H  +H G      
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (91), Expect = 1e-05
 Identities = 13/40 (32%), Positives = 16/40 (40%)

Query: 66  AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              G KP+ C+ C KAF   S L  H   H   K     +
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 15/33 (45%), Positives = 16/33 (48%)

Query: 94  AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              G K F C  C K FSSK  L  H +TH  E
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEE 36

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 8/31 (25%), Positives = 10/31 (32%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          + C  C K F+ K  L  H   H        
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 17/43 (39%), Positives = 19/43 (44%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C  CGK F R S L RH   H G K     +
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.1 bits (82), Expect = 3e-04
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK F +  H+  H   H G KP   +
Sbjct: 2  SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 1e-05
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY C  CGKAF   S   +H   H G +     
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK F        H + H G +P   +
Sbjct: 2  SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.5 bits (80), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK F    S   H  +H G      
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-05
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KP+ C  CGKAF +   L  H+  H G K     +
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   +KC  CGK F Q  H+  H++ H G KP   +
Sbjct: 2  SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C ECGK F +   L +HL +H G      
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 38.7 bits (91), Expect = 1e-05
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G K Y C  CGK F R S L +H   H G K     +
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   YKC  CGK F +   +  H + H G KP   +
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 1e-05
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G +P+ C  CGK F R S L  H+  H   K     +
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   +KC  CGK F +  H+  H++ H   K    +
Sbjct: 3  SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C ECGK F R+  L  HL +H    +   
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 1e-05
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G K + CT CGKAF R S L  H   H G K     
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C ECGK FTRK +L+ H  +H G      
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G  +++C  CGK F +   +  H + H G KP   +
Sbjct: 2  SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY C  C KAF + + L +H   H G K     
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y+C +C K F Q  H+  H + H G KP   +
Sbjct: 2  SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K + C+ C K F+ K  L  H +TH GE
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGE 38

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C  CGKAF + S L RH   H G K     +
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y+C  CGK F Q   +  H + H G KP   +
Sbjct: 2  SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPY C  CGKAF+  S L  H   H GV   + 
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 14/37 (37%), Positives = 16/37 (43%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K + C  CGK F  K  L  H RTH G 
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGV 38

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C  CGK F + S L  H   H GVK     +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS 45

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK F Q  H+ +H + H G+KP   +
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.0 bits (79), Expect = 9e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK FT+   L  H  +H G      
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPY C+ CGK+F  +  L +H   H   K    
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          YQC ECGK F+  + L  H   H        
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 11/43 (25%), Positives = 15/43 (34%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y+C  CGK F     +  H   H   KP   +
Sbjct: 2  SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY C  C KAF   + L +H   H G K     
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   Y+C +C K F     +  H + H G KP   +
Sbjct: 3  SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C  CGKAF + S L RH   H G K     +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   YKC  CGK F Q   +  H + H G KP   +
Sbjct: 3  SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 15/44 (34%), Positives = 18/44 (40%)

Query: 62  DHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
               +  G KP+ C  CGK F R S L  H   H G K     +
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C ECGK F+R+ +LN H  +H G      
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   +KC  CGK F +   +  H + H G KP   +
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 95  HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             G K F C  CGK FS +  L  H + H GE
Sbjct: 7   GTGEKPFKCVECGKGFSRRSALNVHHKLHTGE 38

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G +PY C  CGKAF   S L  H  +H G K    
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   Y+C  CGK F     +  H ++H G KP   +
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G + + C  CGK F +K  L  H R+H GE
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGE 38

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 13/31 (41%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK F  K SL  H   H G      
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 14/44 (31%), Positives = 18/44 (40%)

Query: 62  DHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
               +  G KP+ C  CGK F + S L  H   H G K     +
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-05
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   ++C  CGK F Q  H+  H + H G KP   +
Sbjct: 3  SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          +QC ECGK+FT+   L++H  VH G      
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 15/37 (40%), Positives = 17/37 (45%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K F CE CGK F+    L  H R H GE
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGE 38

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 16/42 (38%), Positives = 17/42 (40%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY C  CGK F   S L RH   H G K     
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   YKC  CGK F    ++  H + H G KP   +
Sbjct: 3  SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 8e-04
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK F     L+ H  +H G      
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY C  C K F++   L +H   H G +     
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVC 75
          +      G   Y+C  C K FIQ+ H+  H + H G +    
Sbjct: 2  SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C EC K F +   LN H  VH G  +   
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KP+ C  CGKAF     L +H   H G K     +
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          + C +CGK F+    LN H  +H G      
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   + C  CGK F     +  H + H G KP   +
Sbjct: 2  SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 3e-05
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C  CGK F + S L RH   H G K     +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK F Q  H+  H   H G KP   +
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-05
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C  CGK F + S L RH   H G K     +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK F Q  H+  H + H G KP   +
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY C  CGK F + S L  H   H G K     
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y C  CGK F Q   +  H + H G KP   +
Sbjct: 2  SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y C ECGK F++K  L+AH   H G      
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.8 bits (89), Expect = 3e-05
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KP+ C+ C KAF   S+L  H   H G K     +
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K F C  C K F++K  L  H RTH GE
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGE 38

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   ++C  C K F    ++  H + H G KP   +
Sbjct: 2  SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.0 bits (79), Expect = 8e-04
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C EC K F  K +L  H   H G      
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY C  CGKAF   S+L  H   H G K     
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK F    ++  H   H G KP   +
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G+ PY C+ C K+F     L  H   H   K    
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 13/36 (36%), Positives = 15/36 (41%)

Query: 91  HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              +  GV  + C  C K FS K  L  H R H  E
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTRE 38

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G + YKC  C K F     +  H + H   KP   +
Sbjct: 2  SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C +C K F+ K  L  H  +H        
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G  P++C+ CGK F   ++L  H   H G +    
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G + + C  CGK F    ++  H + H G +P   +
Sbjct: 2  SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          + C ECGK FT K +L  H  +H G      
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G K + C  C   F +AS L+ H + H+G K    
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C EC   F++  SL  H +VH G      
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   +KC  C   F Q   ++ H   H G KP   +
Sbjct: 2  SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 91  HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
              + +G K + C  C   FS    L+ H   H GE
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGE 38

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G + Y C+ CGKAF++ S L  H   H G K    
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G  +Y+C  CGK FIQ   +  H + H G KP   +
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK F +K +L+ H  +H G      
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KP+ CT+CGK+F    +L  H   H G K    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   ++C  CGK F    ++  H + H G K    +
Sbjct: 2  SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C  CGK F  K +L  H  +H G  +   
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 34.1 bits (79), Expect = 8e-04
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 95  HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             G K F C  CGK F +K  L  H R H GE
Sbjct: 7   GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGE 38

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +    KPY C  CGK + R  +L  H   H+G K     +
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C +CGK + R+ +L+ H  VH G      
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +          YKC  CGK + +  ++  H + H G K    +
Sbjct: 2  SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G K Y C  CGK F ++S L+ H   H G K     +
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   YKC +CGK F Q  H++ H + H G KP   +
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.0 bits (79), Expect = 8e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C  CGK+F++   L  H  VH G      
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPY C  CGKAF + + L +H   H G K    
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   Y+C  CGK F Q  H+  H + H G KP   +
Sbjct: 3  SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G+KPY+C  CGKAF   S L  H   H G K     
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y C ECGK F+   SL  H  +H G      
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 8e-04
 Identities = 14/37 (37%), Positives = 16/37 (43%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  GVK + C  CGK FS    L  H   H GE
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGE 38

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C  CGK F + S L RH   H G K     +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK F Q  H+  H   H G KP   +
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY C  CGK F + S L RH   H G K     
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK F Q  H+  H   H G KP   +
Sbjct: 2  SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-05
 Identities = 16/42 (38%), Positives = 17/42 (40%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G KPY C  CGKAF   S L  H   H G K     
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C +CGK F+ + SL  H  +H G      
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   Y+C  CGK F     +  H   H G KP   +
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 15/41 (36%), Positives = 16/41 (39%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G  PY C  CGKAF R   L  H   H G K    
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK F+RK+ L +H   H G      
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G + Y+C  CGK F +   +  H + H G KP   +
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G   + C  CGK FS K+ L  H RTH GE
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGE 38

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C+ CGK+F++ S L  H   H G       +
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C +CGK F +K  L+ H  +H G +    
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVC 75
          +      G   Y+C  CGK FI+   +  H + H G  P   
Sbjct: 2  SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPY C+ CGKAF R S L  H  +H G +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-05
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C +CGK FTRK  L+ H   H G  +   
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-05
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   YKC  CGK F +   +  H Q+H G +    +
Sbjct: 3  SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K + C  CGK F+ K GL  H ++H GE
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGE 38

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-05
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C+ CGKAF     L  H   H G K     +
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C  CGK F+ + SL+ H  +H G      
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   Y+C +CGK F     +  H + H G KP   +
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.0 bits (79), Expect = 9e-04
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K + C  CGK FS +  L  H R H G+
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGK 38

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-05
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET 105
              +  G KPY C+ CGK+F + S L  H   H G K     +
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   Y+C +CGK F +   +  H Q H G KP   +
Sbjct: 3  SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C  CGK FT+K  L+ H  +H G      
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K + C  CGK F+ K  L  H + H GE
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGE 38

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-05
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KP+ C  CGK+F   S L  H   H G      
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 10/42 (23%), Positives = 15/42 (35%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   ++C  CGK F     +  H + H G  P   +
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.0 bits (79), Expect = 8e-04
 Identities = 14/37 (37%), Positives = 15/37 (40%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K   C  CGK FS    L  H R H GE
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGE 38

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 4e-05
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPY C  C KAF   S+L  H   H G    + 
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.1 bits (82), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C EC K F  K +L  H   H G S    
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 95  HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             G K + C  C K F++K  L  H RTH GE
Sbjct: 7   GTGEKPYECNECQKAFNTKSNLMVHQRTHTGE 38

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-05
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPY C  CGKAF + ++L +H   H G K    
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   Y+C  CGK F Q  ++  H + H G KP   +
Sbjct: 2  SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+CGECGK F +K +L  H  +H G      
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-05
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 62  DHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
               +  G KP+ C  CGK F + S L  H   H G K    
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   +KC  CGK F Q   +  H + H G KP   +
Sbjct: 3  SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C ECGK+FT+   L++H  VH G      
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 15/37 (40%), Positives = 17/37 (45%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K F CE CGK F+    L  H R H GE
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGE 38

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-05
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPY C+ CGK+F   S L+ H   H G +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-05
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK F     ++ H + H G +    +
Sbjct: 2  SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C +CGK FT K  L  H   H G  +   
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE 104
              +  G +P+ C  CGK+F++++ L +H   H G K     
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   +KC  CGK FIQ  H+  H + H G KP   +
Sbjct: 3  SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C ECGK F +   L  H  +H G      
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 16/41 (39%), Positives = 17/41 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPY C  CGKAF   S L  H   H G K    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   YKC  CGK F     +  H   H G KP   +
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
               +  G K + C  CGK F ++  L  H  TH GE
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGE 38

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 37.3 bits (87), Expect = 5e-05
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 63 HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGV 98
            +   G+KP+ C  C ++F R+  L  H   H+ V
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 35.0 bits (81), Expect = 4e-04
 Identities = 10/33 (30%), Positives = 13/33 (39%)

Query: 91  HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
                 G+K F C  C + FS    L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-05
 Identities = 14/41 (34%), Positives = 16/41 (39%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPY C  C K+F   S L  H   H G K    
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC +C K F     +  H + H G KP   +
Sbjct: 2  SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 10/31 (32%), Positives = 12/31 (38%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C  C K F    SL  H  +H G      
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-05
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPY C  CGK F + S L  H   H G K    
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 9e-05
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK F Q  H+ +H + H G KP   +
Sbjct: 2  SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C ECGK FT+   L  H  +H G      
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 40.2 bits (93), Expect = 6e-05
 Identities = 7/53 (13%), Positives = 12/53 (22%)

Query: 71  KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
              +         +                + C  C  +  S   L  HV +H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 39.8 bits (92), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 9   PLATTTSAYQCGECGKQFTRKFSLNAHLHVH 39
           P A++   YQC  C         L+AH+  H
Sbjct: 173 PTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 37.9 bits (87), Expect = 4e-04
 Identities = 8/54 (14%), Positives = 11/54 (20%)

Query: 42  SSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAH 95
            S            +                Y C  C        DL  H+ +H
Sbjct: 150 MSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.8 bits (86), Expect = 7e-05
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 62  DHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
               +    K Y C  CGKAF R   L RH   H      + 
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KP+ C  CGK++ +   L +H   H G K    
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
                G   +KC  CGK + Q  H+  H + H G KP   +
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++CGECGK + ++  L  H  VH G      
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-05
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          Y+C +CGK +  KF+L+ H  VH G      
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G KPY C  CGK +    +L  H   H G +    
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   YKC  CGK +    ++  H + H G +P   +
Sbjct: 2  SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 95  HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             G K + CE CGK ++SK  L  H + H GE
Sbjct: 7   GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGE 38

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 36.0 bits (84), Expect = 1e-04
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)

Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAHLGVK 99
          +P++CT+  CGK F R+ +L+RH   H G K
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHI-DAHLGVKKFAC 103
              +  G KPY C  CGKAF++ + L RH    H G K    
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 34.1 bits (79), Expect = 9e-04
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQA-HGGLKPYVCT 76
          +      G   Y+C  CGK FIQ   +  H +  H G KP   +
Sbjct: 2  SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 36.1 bits (84), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHLGVK 99
          + +VC  C +AF R   LKRH  +H   K
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.1 bits (84), Expect = 1e-04
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 63 HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVK 99
             + GG  PY+C  CGK+F +   L  H  +     
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 35.7 bits (83), Expect = 2e-04
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYG 41
          Y CG+CGK FT++ SL  H      
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 35.3 bits (82), Expect = 3e-04
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 94  AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           +  G   + C  CGK F+ +  L  H R+    
Sbjct: 5   SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQS 37

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 63  HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
              +  G K + C  C K F ++S L  H   H G K    
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 34 AHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCT 76
          +      G   +KC  C K F Q   +  H + H G KP   +
Sbjct: 2  SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 5e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++C EC K FT+  SL  H  +H G      
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 10/37 (27%), Positives = 14/37 (37%)

Query: 67  HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFAC 103
             G KPY C  C + F   + L +H   H      + 
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 34.5 bits (80), Expect = 6e-04
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 65  QAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFA 102
               G + Y C  CGK+F +   L  H   H G    +
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 35.5 bits (81), Expect = 8e-04
 Identities = 18/73 (24%), Positives = 23/73 (31%), Gaps = 5/73 (6%)

Query: 59  HMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHID-AHLGVKK---FACETCGKLFSSKH 114
           H   + Q       Y C YC       +    H+D  H  V     + C  C  L     
Sbjct: 5   HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64

Query: 115 GLKYHV-RTHKGE 126
            L  H  + H GE
Sbjct: 65  ALSEHNLKYHPGE 77

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	129
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.97
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.97
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.97
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.96
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.92
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.91
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.91
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.9
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.9
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.89
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.89
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.89
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.89
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.88
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.88
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.87
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.86
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.85
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.84
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.82
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.82
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.82
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.81
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.8
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.8
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.79
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.79
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.78
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.78
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.78
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.78
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.78
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.77
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.76
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.76
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.76
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.76
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.75
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.75
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.73
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.72
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.72
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.72
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.71
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.7
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.7
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.7
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.7
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.69
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.68
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.68
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.68
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.66
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.65
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.63
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.63
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.62
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.62
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.61
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.61
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.61
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.59
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.59
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.59
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.54
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.54
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.53
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.53
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.53
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.52
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.52
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.52
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.52
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.52
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.52
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.52
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.52
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.51
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.51
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.51
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.51
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.51
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.51
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.51
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.51
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.51
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.5
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.5
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.5
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.5
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.5
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.49
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.49
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.49
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.49
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.48
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.48
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.46
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.45
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.44
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.44
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.43
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.43
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.43
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.43
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.42
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.42
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.42
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.42
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.42
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.42
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.42
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.42
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.42
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.41
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.41
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.41
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.41
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.41
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.41
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.41
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.41
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.4
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.4
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.4
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.39
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.39
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.39
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.39
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.39
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.38
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.38
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.37
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.37
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.37
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.37
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.36
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.36
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.36
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.35
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.34
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.34
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.34
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.34
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.34
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.33
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.33
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.33
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.32
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.32
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.3
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.3
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.3
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.3
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.29
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.29
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.28
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.28
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.27
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.25
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.24
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.18
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.17
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.15
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.15
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.15
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.14
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.14
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.14
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	99.13
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.13
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.13
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	99.13
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.12
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.09
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.08
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	99.08
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	99.03
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	99.02
1ard_A	29	Yeast transcription factor ADR1; transcription reg	99.01
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	99.0
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.0
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.99
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.99
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.98
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.97
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.96
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.95
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.95
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.46
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.92
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.92
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.91
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.44
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.91
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.88
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.88
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.88
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.87
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.86
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.85
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.75
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.74
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	98.18
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.68
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.66
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.64
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.63
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.61
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.61
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.61
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.61
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.6
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.6
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.57
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.57
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.55
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.94
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.94
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.47
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.45
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.76
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.26
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.82
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.69
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.63
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.34
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.3
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	97.16
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.48
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.0
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.75
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.81
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	94.04
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	94.01
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.61
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.15
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	90.46
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	90.11
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	89.4
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	88.8
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	87.67
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	87.28
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	85.95
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	84.47
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	84.46
1lko_A	191	Rubrerythrin all-iron(II) form; reduced form, DIIR	83.66
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	82.13
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	80.96

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=5.7e-35  Score=173.23  Aligned_cols=121  Identities=43%  Similarity=0.862  Sum_probs=68.4

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHH
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDL   88 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l   88 (129)
                      .++.++++|.|..|++.|.....|..|+..|.+++++.|..|++.|.....|..|+..|+++++|.|..|++.|.....|
T Consensus        70 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  149 (190)
T 2i13_A           70 RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNL  149 (190)
T ss_dssp             HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             HhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHH
Confidence            33444444555555555555555555555555555555555555555555555565556666666666666666666666


Q ss_pred             HHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         89 KRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        89 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ..|++.|+++++|.|..|++.|.....|..|+++|++|+||
T Consensus       150 ~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          150 HTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             HHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            66666666666666666666666666666666666666665

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3.4e-33  Score=165.63  Aligned_cols=126  Identities=40%  Similarity=0.790  Sum_probs=104.3

Q ss_pred             CCCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeeccccccccc
Q psy13123          4 IRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFV   83 (129)
Q Consensus         4 l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~   83 (129)
                      |..|+.++.++++|.|..|++.|.....|..|+..|.+++++.|..|++.|.....|..|+..+.++++|.|..|++.|.
T Consensus        37 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  116 (190)
T 2i13_A           37 LAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFS  116 (190)
T ss_dssp             HHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEES
T ss_pred             HHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccC
Confidence            45567777888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             ChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         84 RASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        84 ~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ....|..|++.|+++++|.|..|++.|...+.|..|+++|++++||
T Consensus       117 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  162 (190)
T 2i13_A          117 QLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPY  162 (190)
T ss_dssp             SHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCE
T ss_pred             CHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCe
Confidence            8888888888888888888888888888888888888888888875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.97  E-value=7.7e-32  Score=151.20  Aligned_cols=116  Identities=22%  Similarity=0.390  Sum_probs=104.9

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccC
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVR   84 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~   84 (129)
                      ..+..+++|+++|.|.+|+++|.....|..|+++|+++++|.|+.|++.|.....|..|+..|+++++|.|..|++.|..
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            33567789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHhcCC------CcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         85 ASDLKRHIDAHLGV------KKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        85 ~~~l~~h~~~~~~~------~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ...|..|++.++++      ++|+|..|++.|.       |+++|++|+
T Consensus        91 ~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~-------~~~~h~~ek  132 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQI-------RQYAYLSDR  132 (133)
T ss_dssp             HHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCC-------CCCHHHHCC
T ss_pred             HHHHHHHhHHhcCCCCCCCCCCeecCCCCchhh-------hcccccccC
Confidence            99999999998765      4588999998875       345666664

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.97  E-value=5.1e-30  Score=142.47  Aligned_cols=116  Identities=28%  Similarity=0.653  Sum_probs=109.8

Q ss_pred             CCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHH---hCCCCCeecccccccccChhHH
Q psy13123         12 TTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQA---HGGLKPYVCTYCGKAFVRASDL   88 (129)
Q Consensus        12 ~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~---~~~~~~~~c~~c~~~~~~~~~l   88 (129)
                      +++++|.|..|++.|.....|..|++.|.+++++.|..|++.|.....|..|+..   +.++++|.|..|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            6788999999999999999999999999999999999999999999999999985   5788999999999999999999


Q ss_pred             HHHHHHhcCCCcccCCccccccCCHHHHHHHHH-HhcccC
Q psy13123         89 KRHIDAHLGVKKFACETCGKLFSSKHGLKYHVR-THKGEC  127 (129)
Q Consensus        89 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~e~  127 (129)
                      ..|++.|+++++|.|..|++.|...+.|..|++ .|.++.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            999999999999999999999999999999998 577664

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.97  E-value=4e-30  Score=142.03  Aligned_cols=113  Identities=32%  Similarity=0.675  Sum_probs=108.7

Q ss_pred             CCCCCccccCc--chhccCChhhHHHHHHHhCCCCCccCC--cchhhhcchhHHHHHHHHhCCCCCeecccccccccChh
Q psy13123         11 ATTTSAYQCGE--CGKQFTRKFSLNAHLHVHYGSSNYKCP--LCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRAS   86 (129)
Q Consensus        11 ~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~c~--~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~   86 (129)
                      ++++++|.|..  |++.|.....|..|++.|.+++++.|.  .|++.|.....|..|+..|.++++|.|..|++.|....
T Consensus         1 a~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            1 ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CCSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH
Confidence            36789999997  999999999999999999999999999  79999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcccC--CccccccCCHHHHHHHHHHh
Q psy13123         87 DLKRHIDAHLGVKKFAC--ETCGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus        87 ~l~~h~~~~~~~~~~~C--~~C~~~f~~~~~l~~h~~~h  123 (129)
                      .|..|++.|+++++|.|  +.|++.|...+.|..|+++|
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999  89999999999999999986

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.96  E-value=4.5e-30  Score=147.75  Aligned_cols=120  Identities=31%  Similarity=0.636  Sum_probs=112.3

Q ss_pred             CCCCCCccccCcchhccCChhhHHHHHHH-hCCCCC--------ccCCcchhhhcchhHHHHHHHHhCCCCCeeccc--c
Q psy13123         10 LATTTSAYQCGECGKQFTRKFSLNAHLHV-HYGSSN--------YKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--C   78 (129)
Q Consensus        10 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~-~~~~~~--------~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~--c   78 (129)
                      ....+.+|.|..|++.|.....|..|++. |.+..+        +.|..|++.|.....|..|+..|.++++|.|..  |
T Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             CCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred             echhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence            34566789999999999999999999997 776655        799999999999999999999999999999998  9


Q ss_pred             cccccChhHHHHHHHHhcCCCcccCCc--cccccCCHHHHHHHHHHhcccCCC
Q psy13123         79 GKAFVRASDLKRHIDAHLGVKKFACET--CGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        79 ~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ++.|.....|..|++.|+++++|.|..  |++.|...+.|..|+++|++|+||
T Consensus        99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~  151 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSG  151 (155)
T ss_dssp             CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCS
T ss_pred             CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            999999999999999999999999997  999999999999999999999997

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.96  E-value=2.7e-30  Score=143.67  Aligned_cols=116  Identities=34%  Similarity=0.701  Sum_probs=104.5

Q ss_pred             CCCccccC--cchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeeccc--ccccccChhHH
Q psy13123         13 TTSAYQCG--ECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRASDL   88 (129)
Q Consensus        13 ~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~--c~~~~~~~~~l   88 (129)
                      ++++|.|+  .|++.|.....|..|+..| +.+++.|..|++.|.....|..|+..|.++++|.|..  |++.|.....|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            35689999  8999999999999999999 8899999999999999999999999999999999986  99999999999


Q ss_pred             HHHHHHhcCCCcccCC--ccccccCCHHHHHHHHHHhcccCCC
Q psy13123         89 KRHIDAHLGVKKFACE--TCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        89 ~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ..|++.|+++++|.|.  .|++.|...+.|..|+++|++++|+
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            9999999999999995  5999999999999999999999885

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=6.1e-29  Score=142.98  Aligned_cols=116  Identities=32%  Similarity=0.653  Sum_probs=107.0

Q ss_pred             CCCCCCccccCcc-----hhccCChhhHHHHHHHhCCCCCccCCc--chhhhcchhHHHHHHHHhCCCCCeeccc--ccc
Q psy13123         10 LATTTSAYQCGEC-----GKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGK   80 (129)
Q Consensus        10 ~~~~~~~~~C~~C-----~~~~~~~~~l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~~~~~~~~~~~~~c~~--c~~   80 (129)
                      ++.++++|.|..|     ++.|.....|..|++.|.+++++.|..  |++.|.....|..|++.|+++++|.|..  |++
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  107 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK  107 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCC
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCC
Confidence            6888899998753     488999999999999999999999985  9999999999999999999999999998  999


Q ss_pred             cccChhHHHHHH-HHhcCCCcccCCc--cccccCCHHHHHHHHHHhcc
Q psy13123         81 AFVRASDLKRHI-DAHLGVKKFACET--CGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        81 ~~~~~~~l~~h~-~~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~  125 (129)
                      .|.....|..|+ +.|.++++|.|..  |++.|...+.|..|+++|+|
T Consensus       108 ~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          108 AFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             EESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             ccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            999999999998 7899999999988  99999999999999999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=2e-29  Score=149.42  Aligned_cols=118  Identities=34%  Similarity=0.569  Sum_probs=54.1

Q ss_pred             CCCCCCCCcccc--CcchhccCChhhHHHHHHHhCCCCCccCC--cchhhhcchhHHHHHH-HHh-CCCCCeec--cccc
Q psy13123          8 DPLATTTSAYQC--GECGKQFTRKFSLNAHLHVHYGSSNYKCP--LCGKFFIQLCHMKDHI-QAH-GGLKPYVC--TYCG   79 (129)
Q Consensus         8 ~~~~~~~~~~~C--~~C~~~~~~~~~l~~h~~~~~~~~~~~c~--~c~~~~~~~~~l~~~~-~~~-~~~~~~~c--~~c~   79 (129)
                      +++|+++++|.|  ..|++.|.....|..|++.|.+++++.|.  .|++.|.....|..|+ ..| .++++|.|  ..|+
T Consensus        34 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~  113 (190)
T 1tf6_A           34 LCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCG  113 (190)
T ss_dssp             HHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSC
T ss_pred             HHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCc
Confidence            333444444444  44444444444444444444444444444  4444444444444444 222 23344444  4444


Q ss_pred             ccccChhHHHHHHHHhcCCCcccCCc--cccccCCHHHHHHHHHHhcc
Q psy13123         80 KAFVRASDLKRHIDAHLGVKKFACET--CGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        80 ~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~  125 (129)
                      +.|.....|..|++.|+++++|.|..  |++.|...+.|..|+++|++
T Consensus       114 k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          114 KAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             EECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             cccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            44444444444444444444444443  44444444444444444443

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=9.7e-28  Score=142.13  Aligned_cols=121  Identities=31%  Similarity=0.663  Sum_probs=110.2

Q ss_pred             CCCCCCCcccc--CcchhccCChhhHHHHHHHhCCCCCccC--CcchhhhcchhHHHHHHHHhCCCCCeecc--cccccc
Q psy13123          9 PLATTTSAYQC--GECGKQFTRKFSLNAHLHVHYGSSNYKC--PLCGKFFIQLCHMKDHIQAHGGLKPYVCT--YCGKAF   82 (129)
Q Consensus         9 ~~~~~~~~~~C--~~C~~~~~~~~~l~~h~~~~~~~~~~~c--~~c~~~~~~~~~l~~~~~~~~~~~~~~c~--~c~~~~   82 (129)
                      ....+.++|.|  ..|++.|.....|..|++.|.+++++.|  ..|++.|.....|..|+..|.++++|.|.  .|++.|
T Consensus         5 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   84 (190)
T 1tf6_A            5 ALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRF   84 (190)
T ss_dssp             -----CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEE
T ss_pred             cccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCcc
Confidence            34456788999  6899999999999999999999999999  88999999999999999999999999999  899999


Q ss_pred             cChhHHHHHH-HHh-cCCCcccC--CccccccCCHHHHHHHHHHhcccCCC
Q psy13123         83 VRASDLKRHI-DAH-LGVKKFAC--ETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        83 ~~~~~l~~h~-~~~-~~~~~~~C--~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      .....|..|+ ..| .++++|.|  ..|++.|...+.|..|+++|++++||
T Consensus        85 ~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~  135 (190)
T 1tf6_A           85 TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY  135 (190)
T ss_dssp             SCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSS
T ss_pred             CCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCc
Confidence            9999999999 456 46889999  89999999999999999999999987

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.95  E-value=1.1e-28  Score=138.33  Aligned_cols=95  Identities=25%  Similarity=0.513  Sum_probs=90.7

Q ss_pred             HHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHH
Q psy13123         35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKH  114 (129)
Q Consensus        35 h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~  114 (129)
                      +..+++|+++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|+++|+++++|.|.+|++.|...+
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            44578899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcccCCC
Q psy13123        115 GLKYHVRTHKGECKR  129 (129)
Q Consensus       115 ~l~~h~~~h~~e~p~  129 (129)
                      .|..|+++|++|+|+
T Consensus        93 ~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           93 FMSSHIKSVHSQDPS  107 (133)
T ss_dssp             HHHHHHHHHTCCCTT
T ss_pred             HHHHHhHHhcCCCCC
Confidence            999999999998774

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=2.2e-27  Score=136.48  Aligned_cols=116  Identities=29%  Similarity=0.556  Sum_probs=107.8

Q ss_pred             CCccccCcchhccCChhhHHHHHH---HhCCCCCccCCcc-----hhhhcchhHHHHHHHHhCCCCCeeccc--cccccc
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLH---VHYGSSNYKCPLC-----GKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFV   83 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~---~~~~~~~~~c~~c-----~~~~~~~~~l~~~~~~~~~~~~~~c~~--c~~~~~   83 (129)
                      |.++.|..|++.|.....|..|++   .|.+++++.|..|     ++.|.....|..|+..|.++++|.|..  |++.|.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            457899999999999999999998   6788899988753     489999999999999999999999985  999999


Q ss_pred             ChhHHHHHHHHhcCCCcccCCc--cccccCCHHHHHHHH-HHhcccCCC
Q psy13123         84 RASDLKRHIDAHLGVKKFACET--CGKLFSSKHGLKYHV-RTHKGECKR  129 (129)
Q Consensus        84 ~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~h~-~~h~~e~p~  129 (129)
                      ....|..|++.|+++++|.|..  |++.|...+.|..|+ ++|++++||
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~  129 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPY  129 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCE
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCe
Confidence            9999999999999999999998  999999999999998 899999886

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.92  E-value=1.1e-24  Score=117.96  Aligned_cols=87  Identities=31%  Similarity=0.633  Sum_probs=52.4

Q ss_pred             CCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHH
Q psy13123         43 SNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus        43 ~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      +++.|..|++.|.....|..|+..|.++++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|+++
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~   95 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTL   95 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHH
Confidence            34444444444444444444444445555556666666666666666666666666667777777777777777777777


Q ss_pred             hcccCCC
Q psy13123        123 HKGECKR  129 (129)
Q Consensus       123 h~~e~p~  129 (129)
                      |++|+||
T Consensus        96 H~~~~~~  102 (106)
T 2ee8_A           96 HMQTSSP  102 (106)
T ss_dssp             TTSCCCC
T ss_pred             hCCCCCC
Confidence            7766665

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.91  E-value=2.5e-24  Score=113.22  Aligned_cols=87  Identities=36%  Similarity=0.746  Sum_probs=69.5

Q ss_pred             CCCccCC--cchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHH
Q psy13123         42 SSNYKCP--LCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYH  119 (129)
Q Consensus        42 ~~~~~c~--~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h  119 (129)
                      +++|.|+  .|++.|.....|..|+..|.++++|.|..|++.|.....|..|++.|+++++|.|..|++.|...+.|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            4567776  47777777777777777777777888888888888888888888888888899999999999999999999


Q ss_pred             HHHhcccCC
Q psy13123        120 VRTHKGECK  128 (129)
Q Consensus       120 ~~~h~~e~p  128 (129)
                      +++|++|++
T Consensus        82 ~~~H~~~k~   90 (90)
T 1a1h_A           82 TKIHLRQKD   90 (90)
T ss_dssp             HGGGGC---
T ss_pred             HHHhcccCC
Confidence            999988864

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=2.6e-24  Score=114.49  Aligned_cols=88  Identities=33%  Similarity=0.687  Sum_probs=55.7

Q ss_pred             CCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHH
Q psy13123         41 GSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHV  120 (129)
Q Consensus        41 ~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~  120 (129)
                      +++++.|..|++.|.....|..|+..|.++++|.|..|++.|.....|..|++.|+++++|.|..|++.|...+.|..|+
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   84 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL   84 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            34455555555555555555555555555556666666666666666666666666667777777777777777777777


Q ss_pred             HHhcccCC
Q psy13123        121 RTHKGECK  128 (129)
Q Consensus       121 ~~h~~e~p  128 (129)
                      ++|++|.+
T Consensus        85 ~~h~~~~~   92 (96)
T 2dmd_A           85 RSHTGDSG   92 (96)
T ss_dssp             TTCCSCCC
T ss_pred             HHhcCCCC
Confidence            77776653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.90  E-value=3.1e-23  Score=112.16  Aligned_cols=96  Identities=29%  Similarity=0.604  Sum_probs=90.2

Q ss_pred             CCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhH
Q psy13123          8 DPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASD   87 (129)
Q Consensus         8 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~   87 (129)
                      .....++++|.|..|++.|.....|..|++.|.+++++.|..|++.|.....|..|+..|.++++|.|..|++.|.....
T Consensus         9 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   88 (106)
T 2ee8_A            9 RLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRT   88 (106)
T ss_dssp             CCCCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHH
T ss_pred             cCCcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHH
Confidence            33456778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCcccC
Q psy13123         88 LKRHIDAHLGVKKFAC  103 (129)
Q Consensus        88 l~~h~~~~~~~~~~~C  103 (129)
                      |..|++.|.++++|.+
T Consensus        89 L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           89 LAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHhCCCCCCcC
Confidence            9999999999998864

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=3.7e-24  Score=116.06  Aligned_cols=97  Identities=18%  Similarity=0.294  Sum_probs=70.2

Q ss_pred             CCCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeeccccccccc
Q psy13123          4 IRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFV   83 (129)
Q Consensus         4 l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~   83 (129)
                      -...+++++++++|.|..|++.|.....|..|++.|.  +++.|..|++.|.....|..|+. |+++++|.|..|++.|.
T Consensus         4 ~ss~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~   80 (107)
T 1wjp_A            4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFK   80 (107)
T ss_dssp             CCCCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECS
T ss_pred             ccccCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhC
Confidence            3456788888889999999999988888888888873  56777777777766666666664 66666666666666666


Q ss_pred             ChhHHHHHHH-HhcCCCcccC
Q psy13123         84 RASDLKRHID-AHLGVKKFAC  103 (129)
Q Consensus        84 ~~~~l~~h~~-~~~~~~~~~C  103 (129)
                      ....|..|++ .|.++++|.+
T Consensus        81 ~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           81 SSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             SHHHHHHHHHHTSCCCCCCCC
T ss_pred             CHHHHHHHHHHHcCCCCCCCC
Confidence            6666666665 5666666655

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.89  E-value=2.6e-23  Score=107.51  Aligned_cols=82  Identities=40%  Similarity=0.863  Sum_probs=64.6

Q ss_pred             CccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHh
Q psy13123         44 NYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus        44 ~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h  123 (129)
                      |+.|..|++.|.....|..|+..|.++++|.|..|++.|.....|..|++.|+++++|.|..|++.|...+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            45677777777777777777777777777888888888888888888888888888888888888888888888888888


Q ss_pred             cc
Q psy13123        124 KG  125 (129)
Q Consensus       124 ~~  125 (129)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            75

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=4e-23  Score=109.83  Aligned_cols=92  Identities=28%  Similarity=0.561  Sum_probs=87.4

Q ss_pred             CCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHH
Q psy13123         10 LATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLK   89 (129)
Q Consensus        10 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~   89 (129)
                      +..++++|.|..|++.|.....|..|++.|.+++++.|..|++.|.....|..|+..|.++++|.|..|++.|.....|.
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            35778999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCcc
Q psy13123         90 RHIDAHLGVKKF  101 (129)
Q Consensus        90 ~h~~~~~~~~~~  101 (129)
                      .|++.|++++..
T Consensus        82 ~H~~~h~~~~~p   93 (96)
T 2dmd_A           82 VHLRSHTGDSGP   93 (96)
T ss_dssp             HHHTTCCSCCCC
T ss_pred             HHHHHhcCCCCC
Confidence            999999987754

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=4.6e-23  Score=111.70  Aligned_cols=91  Identities=22%  Similarity=0.369  Sum_probs=85.4

Q ss_pred             HHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHH
Q psy13123         36 LHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHG  115 (129)
Q Consensus        36 ~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~  115 (129)
                      ++.|+++++|.|..|++.|.....|..|+..|.  ++|.|..|++.|.....|..|+. |+++++|.|..|++.|.....
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHH
Confidence            456789999999999999999999999999984  68999999999999999999996 999999999999999999999


Q ss_pred             HHHHHH-HhcccCCC
Q psy13123        116 LKYHVR-THKGECKR  129 (129)
Q Consensus       116 l~~h~~-~h~~e~p~  129 (129)
                      |..|++ +|++++||
T Consensus        85 L~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMA   99 (107)
T ss_dssp             HHHHHHHTSCCCCCC
T ss_pred             HHHHHHHHcCCCCCC
Confidence            999997 89999987

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.89  E-value=7.7e-24  Score=116.12  Aligned_cols=96  Identities=20%  Similarity=0.337  Sum_probs=66.5

Q ss_pred             CCCCCCCCCCCCCCccccCcchhccCChhhHHHHHHH--hCCCCCcc-CCcchhhh--cchhHHHHHHHHhCCCCCeecc
Q psy13123          2 REIRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHV--HYGSSNYK-CPLCGKFF--IQLCHMKDHIQAHGGLKPYVCT   76 (129)
Q Consensus         2 ~~l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~--~~~~~~~~-c~~c~~~~--~~~~~l~~~~~~~~~~~~~~c~   76 (129)
                      .+|..|+++|++++||.|..|++.|.....|..|++.  +.+.+++. |..|++.|  .....|..|+..|+++++|.|.
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            5788899999999999999999999999999999988  55555433 66666665  5555555555555555555555


Q ss_pred             cccccccChhHHHHHHHHhcC
Q psy13123         77 YCGKAFVRASDLKRHIDAHLG   97 (129)
Q Consensus        77 ~c~~~~~~~~~l~~h~~~~~~   97 (129)
                      .|++.|.....|..|++.++.
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTTT
T ss_pred             CCCCccCCHHHHHHHHHHhCC
Confidence            555555555555555555443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=6.1e-23  Score=113.06  Aligned_cols=90  Identities=41%  Similarity=0.779  Sum_probs=86.3

Q ss_pred             CCCCCccCCc--chhhhcchhHHHHHHHHhCCCCCeecc--cccccccChhHHHHHHHHhcCCCcccCCccccccCCHHH
Q psy13123         40 YGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCT--YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHG  115 (129)
Q Consensus        40 ~~~~~~~c~~--c~~~~~~~~~l~~~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~  115 (129)
                      +++++|.|..  |++.|.....|..|+..|.++++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|.....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4678999987  999999999999999999999999999  799999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccCCC
Q psy13123        116 LKYHVRTHKGECKR  129 (129)
Q Consensus       116 l~~h~~~h~~e~p~  129 (129)
                      |..|+++|++++||
T Consensus        82 l~~H~~~h~~~~~~   95 (119)
T 2jp9_A           82 LKTHTRTHTGEKPF   95 (119)
T ss_dssp             HHHHHHHHHTCCCE
T ss_pred             HHHHHHHhcCCCCe
Confidence            99999999999886

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.89  E-value=3e-23  Score=100.69  Aligned_cols=59  Identities=36%  Similarity=0.821  Sum_probs=56.1

Q ss_pred             CCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         69 GLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        69 ~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      .|+||.|..|++.|.....|..|+++|++++||.|.+||+.|...++|..|+++|+||+
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            37899999999999999999999999999999999999999999999999999999974

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.88  E-value=7e-23  Score=107.67  Aligned_cols=87  Identities=34%  Similarity=0.804  Sum_probs=80.9

Q ss_pred             CCCccccC--cchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHH
Q psy13123         13 TTSAYQCG--ECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKR   90 (129)
Q Consensus        13 ~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~   90 (129)
                      +++||.|.  .|++.|.....|..|++.|.+++++.|..|++.|.....|..|+..|+++++|.|..|++.|.....|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            46899998  6999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC
Q psy13123         91 HIDAHLGVK   99 (129)
Q Consensus        91 h~~~~~~~~   99 (129)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            999998865

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=2.1e-22  Score=106.86  Aligned_cols=86  Identities=40%  Similarity=0.846  Sum_probs=55.3

Q ss_pred             CCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCC--CcccCCccccccCCHHHHHH
Q psy13123         41 GSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGV--KKFACETCGKLFSSKHGLKY  118 (129)
Q Consensus        41 ~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~--~~~~C~~C~~~f~~~~~l~~  118 (129)
                      +++++.|..|++.|.....|..|+..|.++++|.|..|++.|.....|..|++.|+++  ++|.|..|++.|...+.|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            3445555555555555555555555555556666666666666666666666666665  77777777777777777777


Q ss_pred             HHH-Hhccc
Q psy13123        119 HVR-THKGE  126 (129)
Q Consensus       119 h~~-~h~~e  126 (129)
                      |++ +|.++
T Consensus        84 H~~~~H~~~   92 (95)
T 2yt9_A           84 HIKQVHSGP   92 (95)
T ss_dssp             HHHHTSCCC
T ss_pred             HHHHhcCCC
Confidence            775 56654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=2.3e-22  Score=111.41  Aligned_cols=90  Identities=33%  Similarity=0.673  Sum_probs=85.6

Q ss_pred             CCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHH---hcCCCcccCCccccccCCHHHH
Q psy13123         40 YGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDA---HLGVKKFACETCGKLFSSKHGL  116 (129)
Q Consensus        40 ~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~---~~~~~~~~C~~C~~~f~~~~~l  116 (129)
                      ++++++.|..|++.|.....|..|+..|.++++|.|..|++.|.....|..|+..   +.++++|.|..|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            4678999999999999999999999999999999999999999999999999985   5788999999999999999999


Q ss_pred             HHHHHHhcccCCC
Q psy13123        117 KYHVRTHKGECKR  129 (129)
Q Consensus       117 ~~h~~~h~~e~p~  129 (129)
                      ..|+++|++++||
T Consensus        83 ~~H~~~h~~~~~~   95 (124)
T 2dlq_A           83 RLHMVSHTGEMPY   95 (124)
T ss_dssp             HHHHHHHSSSCSE
T ss_pred             HHHHHHcCCCCCc
Confidence            9999999999986

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.5e-22  Score=110.20  Aligned_cols=87  Identities=34%  Similarity=0.770  Sum_probs=56.8

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHH
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDL   88 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l   88 (129)
                      ..|+++++|.| .|++.|.....|..|++.|.+++++.|..|++.|.....|..|+..|.++++|.|..|++.|.....|
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            35667777777 67777777777777777776666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHhc
Q psy13123         89 KRHIDAHL   96 (129)
Q Consensus        89 ~~h~~~~~   96 (129)
                      ..|++.+.
T Consensus        82 ~~H~~~~~   89 (110)
T 2csh_A           82 HRHVTSCT   89 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHcc
Confidence            66655543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=2.6e-24  Score=117.99  Aligned_cols=99  Identities=20%  Similarity=0.222  Sum_probs=89.2

Q ss_pred             hhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHH--hCCCCCee-cccccccc--cChhHHHHHHHHhcCCCcccC
Q psy13123         29 KFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQA--HGGLKPYV-CTYCGKAF--VRASDLKRHIDAHLGVKKFAC  103 (129)
Q Consensus        29 ~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~--~~~~~~~~-c~~c~~~~--~~~~~l~~h~~~~~~~~~~~C  103 (129)
                      ...|..|++.|+++++|.|..|++.|.....|..|+..  +.+++++. |..|++.|  .....|..|++.|+++++|.|
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            34567788899999999999999999999999999998  77676655 99999988  888999999999999999999


Q ss_pred             CccccccCCHHHHHHHHHHhcccC
Q psy13123        104 ETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus       104 ~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      .+|++.|...+.|..|+++|+.+.
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCCCCccCCHHHHHHHHHHhCCcc
Confidence            999999999999999999986543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.87  E-value=3.4e-22  Score=103.27  Aligned_cols=82  Identities=43%  Similarity=0.812  Sum_probs=78.8

Q ss_pred             ccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHh
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAH   95 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~   95 (129)
                      ||.|..|++.|.....|..|++.|.+++++.|..|++.|.....|..|+..+.++++|.|..|++.|.....|..|++.|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cC
Q psy13123         96 LG   97 (129)
Q Consensus        96 ~~   97 (129)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            64

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=1.7e-23  Score=120.20  Aligned_cols=101  Identities=31%  Similarity=0.649  Sum_probs=91.9

Q ss_pred             CCCCCCC-CCCCCc--------cccCcchhccCChhhHHHHHHHhCCCCCccCCc--chhhhcchhHHHHHHHHhCCCCC
Q psy13123          4 IRPRDPL-ATTTSA--------YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKP   72 (129)
Q Consensus         4 l~~~~~~-~~~~~~--------~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~~~~~~~~~~~   72 (129)
                      |..|+.. |.++.+        |.|..|++.|.....|..|++.|++++++.|..  |++.|.....|..|++.|+++++
T Consensus        41 L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~  120 (155)
T 2rpc_A           41 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP  120 (155)
T ss_dssp             HHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCS
T ss_pred             HHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            3445544 555554        899999999999999999999999999999998  99999999999999999999999


Q ss_pred             eeccc--ccccccChhHHHHHHHHhcCCCcccCC
Q psy13123         73 YVCTY--CGKAFVRASDLKRHIDAHLGVKKFACE  104 (129)
Q Consensus        73 ~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~  104 (129)
                      |.|..  |++.|.....|..|++.|+++++|.|.
T Consensus       121 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          121 FKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             BCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            99997  999999999999999999999999885

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.86  E-value=7.4e-22  Score=107.38  Aligned_cols=88  Identities=33%  Similarity=0.682  Sum_probs=83.9

Q ss_pred             HhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHH
Q psy13123         38 VHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLK  117 (129)
Q Consensus        38 ~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~  117 (129)
                      .|+++++|.| .|++.|.....|..|+..|.++++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            4678999999 899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccc
Q psy13123        118 YHVRTHKGE  126 (129)
Q Consensus       118 ~h~~~h~~e  126 (129)
                      .|+++|+..
T Consensus        83 ~H~~~~~~~   91 (110)
T 2csh_A           83 RHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHcccc
Confidence            999998643

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=4.6e-23  Score=114.37  Aligned_cols=97  Identities=34%  Similarity=0.665  Sum_probs=86.0

Q ss_pred             CCCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc--chhhhcchhHHHHHHHHhCCCCCeecc--ccc
Q psy13123          4 IRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCT--YCG   79 (129)
Q Consensus         4 l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~~~~~~~~~~~~~c~--~c~   79 (129)
                      |..|+.+| ++++|.|..|++.|.....|..|++.|.+++++.|..  |++.|.....|..|+..|.++++|.|+  .|+
T Consensus        23 l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~  101 (124)
T 1ubd_C           23 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCN  101 (124)
T ss_dssp             HHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCC
T ss_pred             HHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCC
Confidence            44566677 7889999999999999999999999999999999986  999999999999999999999999996  599


Q ss_pred             ccccChhHHHHHHHHhcCCCcc
Q psy13123         80 KAFVRASDLKRHIDAHLGVKKF  101 (129)
Q Consensus        80 ~~~~~~~~l~~h~~~~~~~~~~  101 (129)
                      +.|.....|..|+++|++++++
T Consensus       102 ~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C          102 KKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCCSSTTTTHHHHHHHC-----
T ss_pred             CccCCHHHHHHHHHHHcccccC
Confidence            9999999999999999988764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=1.8e-21  Score=103.26  Aligned_cols=88  Identities=40%  Similarity=0.814  Sum_probs=82.6

Q ss_pred             CCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCC--CCeecccccccccChhHH
Q psy13123         11 ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGL--KPYVCTYCGKAFVRASDL   88 (129)
Q Consensus        11 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~--~~~~c~~c~~~~~~~~~l   88 (129)
                      .+++++|.|..|++.|.....|..|++.|.+++++.|..|++.|.....|..|+..+.++  ++|.|..|++.|.....|
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            367889999999999999999999999999999999999999999999999999999987  899999999999999999


Q ss_pred             HHHHH-HhcCC
Q psy13123         89 KRHID-AHLGV   98 (129)
Q Consensus        89 ~~h~~-~~~~~   98 (129)
                      ..|++ .|.++
T Consensus        82 ~~H~~~~H~~~   92 (95)
T 2yt9_A           82 NGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHTSCCC
T ss_pred             HHHHHHhcCCC
Confidence            99986 67654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.85  E-value=8.2e-21  Score=101.51  Aligned_cols=83  Identities=36%  Similarity=0.763  Sum_probs=58.3

Q ss_pred             CCccCCc--chhhhcchhHHHHHHHHhCCCCCeecc--cccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHH
Q psy13123         43 SNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCT--YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKY  118 (129)
Q Consensus        43 ~~~~c~~--c~~~~~~~~~l~~~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~  118 (129)
                      +++.|..  |++.|.....|..|+..|.++++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|...+.|..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   93 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL   93 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHH
Confidence            4455554  666666666666666666666666664  477777777777777777777778888888888888888888


Q ss_pred             HHHHhcc
Q psy13123        119 HVRTHKG  125 (129)
Q Consensus       119 h~~~h~~  125 (129)
                      |+++|++
T Consensus        94 H~~~H~~  100 (100)
T 2ebt_A           94 HMKRHQN  100 (100)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhCC
Confidence            8887764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.84  E-value=5.2e-21  Score=100.26  Aligned_cols=83  Identities=36%  Similarity=0.815  Sum_probs=65.5

Q ss_pred             CCCccCCc--chhhhcchhHHHHHHHHhCCCCCeecc--cccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHH
Q psy13123         42 SSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCT--YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLK  117 (129)
Q Consensus        42 ~~~~~c~~--c~~~~~~~~~l~~~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~  117 (129)
                      .+++.|..  |++.|.....|..|+..|.++++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|...+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            34566666  777777777777777777777778886  58888888888888888888888888888888888888888


Q ss_pred             HHHHHhc
Q psy13123        118 YHVRTHK  124 (129)
Q Consensus       118 ~h~~~h~  124 (129)
                      .|+++|+
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            8888874

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.82  E-value=6.2e-21  Score=92.48  Aligned_cols=58  Identities=28%  Similarity=0.614  Sum_probs=47.8

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCC
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK   71 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~   71 (129)
                      |+||.|.+||++|.....|..|+++|++++||.|..|++.|.....|..|+++|+|+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6788888888888888888888888888888888888888888888888888888763

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.82  E-value=3.9e-20  Score=93.78  Aligned_cols=65  Identities=34%  Similarity=0.633  Sum_probs=61.1

Q ss_pred             HHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         65 QAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        65 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ..+.++++|.|..|++.|.....|..|++.|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            34677889999999999999999999999999999999999999999999999999999999998

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.82  E-value=1.3e-19  Score=96.87  Aligned_cols=90  Identities=31%  Similarity=0.614  Sum_probs=82.9

Q ss_pred             CCCCCCCCccccCc--chhccCChhhHHHHHHHhCCCCCccCC--cchhhhcchhHHHHHHHHhCCCCCeeccccccccc
Q psy13123          8 DPLATTTSAYQCGE--CGKQFTRKFSLNAHLHVHYGSSNYKCP--LCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFV   83 (129)
Q Consensus         8 ~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~c~--~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~   83 (129)
                      .+.....++|.|..  |++.|.....|..|++.|.+++++.|.  .|++.|.....|..|+..|+++++|.|..|++.|.
T Consensus         7 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   86 (100)
T 2ebt_A            7 GPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFS   86 (100)
T ss_dssp             CCCCCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCS
T ss_pred             CcccccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccC
Confidence            34455667899996  999999999999999999999999996  69999999999999999999999999999999999


Q ss_pred             ChhHHHHHHHHhcC
Q psy13123         84 RASDLKRHIDAHLG   97 (129)
Q Consensus        84 ~~~~l~~h~~~~~~   97 (129)
                      ....|..|++.|++
T Consensus        87 ~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           87 RSDHLALHMKRHQN  100 (100)
T ss_dssp             SHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHhCC
Confidence            99999999998863

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.81  E-value=1.1e-20  Score=100.74  Aligned_cols=76  Identities=22%  Similarity=0.303  Sum_probs=64.2

Q ss_pred             hcchhHHHHHHHHhCCCCCeeccccccccc-ChhHHHHHHHHhcC-CCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         54 FIQLCHMKDHIQAHGGLKPYVCTYCGKAFV-RASDLKRHIDAHLG-VKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        54 ~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~-~~~~l~~h~~~~~~-~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +.....+..|++.|.++++|.|..|++.|. ....|..|++.|++ +++|.|.+|++.|.....|..|+++|++++|+
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            334455667888888888899999999998 88889999988888 88999999999999999999999999988874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.8e-19  Score=93.77  Aligned_cols=80  Identities=23%  Similarity=0.387  Sum_probs=64.3

Q ss_pred             CCCCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCC----CCccCCcchhhhcchhHHHHHHHHhCCCCCeecccc
Q psy13123          3 EIRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGS----SNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYC   78 (129)
Q Consensus         3 ~l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~----~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c   78 (129)
                      +|.+|+++|+++++|.|..|++.|.....|..|++.+.+.    ++|.|..|++.|.....|..|+..+++++++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            5778999999999999999999999999999998876654    567777777777777777777777777777777777


Q ss_pred             cccc
Q psy13123         79 GKAF   82 (129)
Q Consensus        79 ~~~~   82 (129)
                      +..+
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            6543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.80  E-value=8.7e-20  Score=95.53  Aligned_cols=82  Identities=35%  Similarity=0.746  Sum_probs=78.2

Q ss_pred             CCccccCc--chhccCChhhHHHHHHHhCCCCCccCC--cchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHH
Q psy13123         14 TSAYQCGE--CGKQFTRKFSLNAHLHVHYGSSNYKCP--LCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLK   89 (129)
Q Consensus        14 ~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~c~--~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~   89 (129)
                      .++|.|..  |++.|.....|..|++.|.+++++.|+  .|++.|.....|..|+..|+++++|.|..|++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  999999999999999999999999997  69999999999999999999999999999999999999999


Q ss_pred             HHHHHh
Q psy13123         90 RHIDAH   95 (129)
Q Consensus        90 ~h~~~~   95 (129)
                      .|++.|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            998876

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.79  E-value=1.6e-20  Score=98.31  Aligned_cols=80  Identities=29%  Similarity=0.571  Sum_probs=47.2

Q ss_pred             CCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHH
Q psy13123         43 SNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus        43 ~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      +||.|..|++.|.....|..|+..|+++++|.|..|++.|.....|..|++.+++ .+|.|..|++.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            4455555555555555555555555555556666666666666666666655553 556666666666666666666665


Q ss_pred             h
Q psy13123        123 H  123 (129)
Q Consensus       123 h  123 (129)
                      +
T Consensus        81 ~   81 (88)
T 1llm_C           81 L   81 (88)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.79  E-value=2.6e-20  Score=103.92  Aligned_cols=115  Identities=18%  Similarity=0.300  Sum_probs=89.7

Q ss_pred             CCCCCCCCccccCcchhccCChhhHHHHHHHh---CCCCCccCCcchhhhc------chhHHHHHHHHhCCCCCeecccc
Q psy13123          8 DPLATTTSAYQCGECGKQFTRKFSLNAHLHVH---YGSSNYKCPLCGKFFI------QLCHMKDHIQAHGGLKPYVCTYC   78 (129)
Q Consensus         8 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~---~~~~~~~c~~c~~~~~------~~~~l~~~~~~~~~~~~~~c~~c   78 (129)
                      ..++++.++|.|...+.....  .+..+...+   ..++.+.|..|.+.|.      ....|..|+ .++++++|.|..|
T Consensus         4 ~~~~~~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C   80 (129)
T 2wbt_A            4 SDVDSGSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLC   80 (129)
T ss_dssp             -CCCTTCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTT
T ss_pred             chhcccccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCC
Confidence            457889999988776654322  223332222   2345577888887766      456666665 6888999999999


Q ss_pred             cccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         79 GKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        79 ~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ++.|.....|..|++.|  +++|.|..|++.|...+.|..|+++|+++.
T Consensus        81 ~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           81 LMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             CCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             CcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            99999999999999998  899999999999999999999999999864

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=2.2e-19  Score=91.68  Aligned_cols=63  Identities=37%  Similarity=0.718  Sum_probs=57.4

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +.++++|.|..|++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++|++|+||
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~   75 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS   75 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            556788999999999999999999999999999999999999999999999999999999987

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.78  E-value=4.4e-19  Score=92.03  Aligned_cols=78  Identities=33%  Similarity=0.563  Sum_probs=58.0

Q ss_pred             CccC--CcchhhhcchhHHHHHHHHhCCCCCeeccc--ccccccChhHHHHHHHHhcCCCcccCCc---cccccCCHHHH
Q psy13123         44 NYKC--PLCGKFFIQLCHMKDHIQAHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACET---CGKLFSSKHGL  116 (129)
Q Consensus        44 ~~~c--~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~---C~~~f~~~~~l  116 (129)
                      ||.|  ..|++.|.....|..|+..|.++++|.|..  |++.|.....|..|++.|++   |.|..   |++.|...+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            3556  667777777777777777777777777766  77777777777777777776   77877   88888888888


Q ss_pred             HHHHHHhc
Q psy13123        117 KYHVRTHK  124 (129)
Q Consensus       117 ~~h~~~h~  124 (129)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            88887764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=3.6e-19  Score=89.26  Aligned_cols=63  Identities=19%  Similarity=0.357  Sum_probs=58.9

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +.++++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|+++|++|+|.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            677889999999999999999999999999999999999999999999999999999999874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.78  E-value=2.5e-20  Score=97.52  Aligned_cols=82  Identities=21%  Similarity=0.430  Sum_probs=77.3

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHH
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHID   93 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~   93 (129)
                      ++||.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|+..+.+ .++.|..|++.|.....|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            57899999999999999999999999999999999999999999999999999885 78999999999999999999998


Q ss_pred             Hhc
Q psy13123         94 AHL   96 (129)
Q Consensus        94 ~~~   96 (129)
                      ..+
T Consensus        80 ~~h   82 (88)
T 1llm_C           80 RLK   82 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=8.4e-19  Score=93.01  Aligned_cols=73  Identities=22%  Similarity=0.394  Sum_probs=62.5

Q ss_pred             hhcchhHHHHHHHHhCCCCCeecccccccc-cChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHH-HHHhccc
Q psy13123         53 FFIQLCHMKDHIQAHGGLKPYVCTYCGKAF-VRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYH-VRTHKGE  126 (129)
Q Consensus        53 ~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~-~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h-~~~h~~e  126 (129)
                      .|.....+..++..+.++++|.|..|++.| .....|..|++.| ++++|.|.+|++.|...+.|..| +++|+++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            455666677788888888899999999999 8999999999998 88999999999999999999999 8888754

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=9.5e-19  Score=89.64  Aligned_cols=69  Identities=30%  Similarity=0.614  Sum_probs=37.1

Q ss_pred             CCCccCCc--chhhhcchhHHHHHHH-HhCCCCCeeccc--ccccccChhHHHHHHHHhcCCCcccCCcccccc
Q psy13123         42 SSNYKCPL--CGKFFIQLCHMKDHIQ-AHGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACETCGKLF  110 (129)
Q Consensus        42 ~~~~~c~~--c~~~~~~~~~l~~~~~-~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f  110 (129)
                      ++++.|..  |++.|.....|..|+. .|.++++|.|..  |++.|.....|..|+++|+++++|.|.+|++.|
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            34444443  5555555555555554 355555555555  555555555555555555555556665555555

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=9.5e-19  Score=89.27  Aligned_cols=71  Identities=35%  Similarity=0.644  Sum_probs=58.3

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeec
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVC   75 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c   75 (129)
                      ......+.++++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|++.|+++++|.|
T Consensus         7 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A            7 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34566677888888888888888888888888888888888888888888888888888888888888776

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=9.6e-19  Score=89.62  Aligned_cols=72  Identities=31%  Similarity=0.689  Sum_probs=68.0

Q ss_pred             CCCCccccCc--chhccCChhhHHHHHH-HhCCCCCccCCc--chhhhcchhHHHHHHHHhCCCCCeeccccccccc
Q psy13123         12 TTTSAYQCGE--CGKQFTRKFSLNAHLH-VHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFV   83 (129)
Q Consensus        12 ~~~~~~~C~~--C~~~~~~~~~l~~h~~-~~~~~~~~~c~~--c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~   83 (129)
                      +++++|.|..  |++.|.....|..|++ .|.+++++.|..  |++.|.....|..|++.|+++++|.|..|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            5778999987  9999999999999999 799999999999  9999999999999999999999999999999873

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=5.8e-19  Score=94.28  Aligned_cols=67  Identities=24%  Similarity=0.362  Sum_probs=47.6

Q ss_pred             CCCCCccCCcchhhhcchhHHHHHHH-Hh---CCCCCeecccccccccChhHHHHH-HHHhcCCCcccCCcc
Q psy13123         40 YGSSNYKCPLCGKFFIQLCHMKDHIQ-AH---GGLKPYVCTYCGKAFVRASDLKRH-IDAHLGVKKFACETC  106 (129)
Q Consensus        40 ~~~~~~~c~~c~~~~~~~~~l~~~~~-~~---~~~~~~~c~~c~~~~~~~~~l~~h-~~~~~~~~~~~C~~C  106 (129)
                      +|++||.|..|++.|.....|..|++ .|   .++++|.|..|++.|.....|..| +++|++++||.|..+
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            46677777777777777777777775 36   456677777777777777777777 667777777777653

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=2.6e-18  Score=86.58  Aligned_cols=64  Identities=45%  Similarity=0.770  Sum_probs=59.2

Q ss_pred             HHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCC
Q psy13123         65 QAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECK  128 (129)
Q Consensus        65 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p  128 (129)
                      ..|+++++|.|..|++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++|+++.+
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            3578899999999999999999999999999999999999999999999999999999998754

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.75  E-value=2.2e-18  Score=89.36  Aligned_cols=78  Identities=29%  Similarity=0.577  Sum_probs=74.1

Q ss_pred             cccc--CcchhccCChhhHHHHHHHhCCCCCccCCc--chhhhcchhHHHHHHHHhCCCCCeeccc---ccccccChhHH
Q psy13123         16 AYQC--GECGKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQAHGGLKPYVCTY---CGKAFVRASDL   88 (129)
Q Consensus        16 ~~~C--~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~~~~~~~~~~~~~c~~---c~~~~~~~~~l   88 (129)
                      ||.|  ..|++.|.....|..|++.|.+++++.|+.  |++.|.....|..|++.|++   |.|..   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            6889  999999999999999999999999999988  99999999999999999998   99999   99999999999


Q ss_pred             HHHHHHhc
Q psy13123         89 KRHIDAHL   96 (129)
Q Consensus        89 ~~h~~~~~   96 (129)
                      ..|++.|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99998763

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=6.8e-19  Score=91.54  Aligned_cols=79  Identities=28%  Similarity=0.481  Sum_probs=65.6

Q ss_pred             HHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCC----CCeecccccccccChhHHHHHHHHhcCCCcccCCccc
Q psy13123         32 LNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGL----KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCG  107 (129)
Q Consensus        32 l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~----~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~  107 (129)
                      +..|+++|+++++|.|..|++.|.....|..|+..+...    ++|.|..|++.|.....|..|++.|++++++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            445777888888888888888888888888888776654    6788888888888888888888888888888888887


Q ss_pred             ccc
Q psy13123        108 KLF  110 (129)
Q Consensus       108 ~~f  110 (129)
                      ..|
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.73  E-value=9.5e-18  Score=84.89  Aligned_cols=66  Identities=33%  Similarity=0.741  Sum_probs=45.6

Q ss_pred             CCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCe
Q psy13123          8 DPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPY   73 (129)
Q Consensus         8 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~   73 (129)
                      ....+++++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|++.|++++||
T Consensus         9 ~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A            9 SHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             --CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            445566677777777777777777777777777777777777777777777777777777766654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=6.1e-18  Score=90.31  Aligned_cols=72  Identities=19%  Similarity=0.322  Sum_probs=65.7

Q ss_pred             CCCCCCCCccccCcchhccCChhhHHHHHH-Hh---CCCCCccCCcchhhhcchhHHHHH-HHHhCCCCCeeccccc
Q psy13123          8 DPLATTTSAYQCGECGKQFTRKFSLNAHLH-VH---YGSSNYKCPLCGKFFIQLCHMKDH-IQAHGGLKPYVCTYCG   79 (129)
Q Consensus         8 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~~---~~~~~~~c~~c~~~~~~~~~l~~~-~~~~~~~~~~~c~~c~   79 (129)
                      ....+|++||.|..|++.|.....|..|++ .|   .+++||.|..|++.|.....|..| ++.|++++||.|..+.
T Consensus        10 ~~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             TTCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             cccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            456789999999999999999999999997 58   568999999999999999999999 7899999999998744

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.72  E-value=1e-17  Score=86.58  Aligned_cols=62  Identities=26%  Similarity=0.550  Sum_probs=55.6

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHH-HHhcccC
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHV-RTHKGEC  127 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~-~~h~~e~  127 (129)
                      .+...+++.|..|++.|.....|..|+++|++++||.|.+|++.|...+.|..|+ ++|++|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            3556778999999999999999999999999999999999999999999999996 5688774

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.72  E-value=1.3e-17  Score=80.20  Aligned_cols=57  Identities=35%  Similarity=0.700  Sum_probs=49.7

Q ss_pred             CCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcc
Q psy13123         69 GLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        69 ~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      |+++|.|..|++.|.....|..|++.|+++++|.|..|++.|...+.|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            457899999999999999999999999999999999999999999999999999874

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.71  E-value=2.3e-17  Score=79.31  Aligned_cols=56  Identities=30%  Similarity=0.636  Sum_probs=52.6

Q ss_pred             CeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        72 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ||.|..|++.|.....|..|++.|+++++|.|..|++.|...+.|..|+++|++|+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            58899999999999999999999999999999999999999999999999999886

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=4.8e-17  Score=82.89  Aligned_cols=67  Identities=16%  Similarity=0.430  Sum_probs=59.1

Q ss_pred             CCCCCCCCCCCCCccccCcchhccCChhhHHHHHH-HhCCC-CCccCCcchhhhcchhHHHHHHHHhCC
Q psy13123          3 EIRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLH-VHYGS-SNYKCPLCGKFFIQLCHMKDHIQAHGG   69 (129)
Q Consensus         3 ~l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~-~~~~c~~c~~~~~~~~~l~~~~~~~~~   69 (129)
                      +|.+|+++|++++||.|..|++.|.....|..|++ .|.++ ++|.|..|++.|.....|..|++.+.+
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            57889999999999999999999999999999997 67664 789999999999999999999887544

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=2.4e-17  Score=82.53  Aligned_cols=63  Identities=21%  Similarity=0.397  Sum_probs=49.9

Q ss_pred             CCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCC
Q psy13123         10 LATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKP   72 (129)
Q Consensus        10 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~   72 (129)
                      +++++++|.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|++.++++++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            567778888888888888888888888888877888888888888877777777777777665

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.1e-17  Score=82.59  Aligned_cols=66  Identities=35%  Similarity=0.588  Sum_probs=55.0

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK   71 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~   71 (129)
                      .+.++|+++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|+++.
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            356778888888888888888888888888888888888888888888888888888888877653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=2.7e-18  Score=91.48  Aligned_cols=73  Identities=19%  Similarity=0.255  Sum_probs=42.0

Q ss_pred             hhHHHHHHHhCCCCCccCCcchhhhc-chhHHHHHHHHhCC-CCCeecccccccccChhHHHHHHHHhcCCCccc
Q psy13123         30 FSLNAHLHVHYGSSNYKCPLCGKFFI-QLCHMKDHIQAHGG-LKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFA  102 (129)
Q Consensus        30 ~~l~~h~~~~~~~~~~~c~~c~~~~~-~~~~l~~~~~~~~~-~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~  102 (129)
                      ..+..|++.|.++++|.|..|++.|. ....|..|++.|++ +++|.|..|++.|.....|..|++.|++++++.
T Consensus        10 ~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           10 GPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            33445555555555566666665555 55555555555555 555666666666666666666665555555543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=3.8e-17  Score=83.46  Aligned_cols=62  Identities=26%  Similarity=0.499  Sum_probs=52.2

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcC---CCcccCCccccccCCHHHHHHHH-HHhcccCC
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLG---VKKFACETCGKLFSSKHGLKYHV-RTHKGECK  128 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~---~~~~~C~~C~~~f~~~~~l~~h~-~~h~~e~p  128 (129)
                      |+++++|.|..|++.|.....|..|++.|++   +++|.|..|++.|...+.|..|+ +.|.++.|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            6778888888888888888888888888875   78899999999999999999998 45677665

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=8.3e-18  Score=85.74  Aligned_cols=68  Identities=29%  Similarity=0.544  Sum_probs=55.5

Q ss_pred             HHHHHHhCCCCCeecccccccccChhHHHHHHH-HhcCC-CcccCCccccccCCHHHHHHHHHHh-cccCC
Q psy13123         61 KDHIQAHGGLKPYVCTYCGKAFVRASDLKRHID-AHLGV-KKFACETCGKLFSSKHGLKYHVRTH-KGECK  128 (129)
Q Consensus        61 ~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~-~~~~C~~C~~~f~~~~~l~~h~~~h-~~e~p  128 (129)
                      ..|++.|+++++|.|..|++.|.....|..|+. .|.++ ++|.|..|++.|...+.|..|++++ ..+.|
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            345667888888999999999999999999987 56664 7899999999999999999999875 45555

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=2.5e-17  Score=81.49  Aligned_cols=61  Identities=28%  Similarity=0.554  Sum_probs=54.3

Q ss_pred             HHhCCCCCeecccccccccChhHHHHHHHH-h-cCCCcccCCccccccCCHHHHHHHHHHhcc
Q psy13123         65 QAHGGLKPYVCTYCGKAFVRASDLKRHIDA-H-LGVKKFACETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        65 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~-~-~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      ..|+++++|.|..|++.|.....|..|++. | .++++|.|..|++.|...+.|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            347788899999999999999999999987 6 588999999999999999999999999875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.68  E-value=6.9e-17  Score=83.47  Aligned_cols=63  Identities=22%  Similarity=0.414  Sum_probs=46.9

Q ss_pred             CCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHH-HhCCC
Q psy13123          8 DPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQ-AHGGL   70 (129)
Q Consensus         8 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~-~~~~~   70 (129)
                      +..++..++|.|++|++.|.....|..|+++|++++||.|..|++.|.....|..|++ .|+++
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            4556666777788888888888888888877777778888888887777777777764 46554

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=2.4e-16  Score=83.47  Aligned_cols=77  Identities=16%  Similarity=0.280  Sum_probs=69.2

Q ss_pred             hccCChhhHHHHHHHhCCCCCccCCcchhhh-cchhHHHHHHHHhCCCCCeecccccccccChhHHHHH-HHHhcCCCcc
Q psy13123         24 KQFTRKFSLNAHLHVHYGSSNYKCPLCGKFF-IQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRH-IDAHLGVKKF  101 (129)
Q Consensus        24 ~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~-~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h-~~~~~~~~~~  101 (129)
                      .+|.....+..|++.+.++++|.|..|++.| .....|..|++.| ++++|.|..|++.|.....|..| +..|+++..+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            3566778889999999999999999999999 9999999999999 99999999999999999999999 8888765433

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.6e-16  Score=76.36  Aligned_cols=57  Identities=33%  Similarity=0.754  Sum_probs=51.4

Q ss_pred             CCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHH-HHhcccC
Q psy13123         71 KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHV-RTHKGEC  127 (129)
Q Consensus        71 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~-~~h~~e~  127 (129)
                      ++|.|..|++.|.....|..|++.|+++++|.|..|++.|...+.|..|+ ++|+++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            47899999999999999999999999999999999999999999999996 6787763

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.63  E-value=3e-16  Score=75.33  Aligned_cols=56  Identities=34%  Similarity=0.679  Sum_probs=38.8

Q ss_pred             CCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhC
Q psy13123         13 TTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHG   68 (129)
Q Consensus        13 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~   68 (129)
                      |+++|.|..|++.|.....|..|++.|++++++.|+.|++.|.....|..|+..++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            35677777777777777777777777777777777777777777777777776654

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=5.5e-16  Score=78.09  Aligned_cols=59  Identities=39%  Similarity=0.810  Sum_probs=54.4

Q ss_pred             HhCCCCCeecc--cccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhc
Q psy13123         66 AHGGLKPYVCT--YCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        66 ~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      .++++++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|...+.|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            36788899997  599999999999999999999999999999999999999999999885

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=2e-16  Score=78.22  Aligned_cols=61  Identities=23%  Similarity=0.442  Sum_probs=42.8

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHH-h-CCCCCccCCcchhhhcchhHHHHHHHHhCC
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHV-H-YGSSNYKCPLCGKFFIQLCHMKDHIQAHGG   69 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~-~-~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~   69 (129)
                      ++|++++||.|..|++.|.....|..|++. | .++++|.|+.|++.|.....|..|++.+++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            456677777777777777777777777766 5 466777777777777777777777666543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=5.6e-16  Score=79.03  Aligned_cols=65  Identities=29%  Similarity=0.423  Sum_probs=51.1

Q ss_pred             CCCCCCccccCcchhccCChhhHHHHHHHhCC---CCCccCCcchhhhcchhHHHHHHH-HhCCCCCee
Q psy13123         10 LATTTSAYQCGECGKQFTRKFSLNAHLHVHYG---SSNYKCPLCGKFFIQLCHMKDHIQ-AHGGLKPYV   74 (129)
Q Consensus        10 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~---~~~~~c~~c~~~~~~~~~l~~~~~-~~~~~~~~~   74 (129)
                      +|+++++|.|..|++.|.....|..|++.|.+   +++|.|..|++.|.....|..|++ .|.++++..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            46788888888888888888888888888875   778888888888888888888873 466555544

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.61  E-value=2e-15  Score=79.66  Aligned_cols=57  Identities=30%  Similarity=0.489  Sum_probs=41.0

Q ss_pred             eecccccccccChhHHHHHHHH-hcCCCc--------ccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         73 YVCTYCGKAFVRASDLKRHIDA-HLGVKK--------FACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        73 ~~c~~c~~~~~~~~~l~~h~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +.|..|++.|.....|..|++. |.++++        |.|..|++.|.....|..|+++|++|+||
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   91 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSG   91 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            4566666666666666666665 666555        77888888888888888888888888776

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=5.1e-18  Score=85.56  Aligned_cols=70  Identities=19%  Similarity=0.255  Sum_probs=54.5

Q ss_pred             CCCCCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccc
Q psy13123          2 REIRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYC   78 (129)
Q Consensus         2 ~~l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c   78 (129)
                      .+|..|+++|+++++|.|..|++.|.....|..       ++++.|..|++.|.....|..|+..|+++++|.|..|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            468889999999999999999999988877665       5667777777777777777777766777777776654

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=4e-16  Score=77.15  Aligned_cols=60  Identities=25%  Similarity=0.432  Sum_probs=55.0

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCC-ccccccCCHHHHHHHHHHhcccCC
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACE-TCGKLFSSKHGLKYHVRTHKGECK  128 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~-~C~~~f~~~~~l~~h~~~h~~e~p  128 (129)
                      ..++++|.|..|++.|. ...|..|+++ +++++|.|. .|++.|...+.|..|+++|.++.|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            45678999999999999 9999999998 999999999 999999999999999999988776

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.59  E-value=1.5e-15  Score=72.83  Aligned_cols=55  Identities=24%  Similarity=0.555  Sum_probs=36.2

Q ss_pred             ccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCC
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGL   70 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~   70 (129)
                      ||.|..|++.|.....|..|++.|++++++.|..|++.|.....|..|++.|.++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            4666666666666666666666666666666666666666666666666666554

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.59  E-value=3.2e-16  Score=87.26  Aligned_cols=84  Identities=20%  Similarity=0.283  Sum_probs=72.6

Q ss_pred             CCCccccCcchhccC------ChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChh
Q psy13123         13 TTSAYQCGECGKQFT------RKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRAS   86 (129)
Q Consensus        13 ~~~~~~C~~C~~~~~------~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~   86 (129)
                      .++.+.|..|...|.      ....|..|+ .|++++||.|..|++.|.....|..|+..|  +++|.|..|++.|....
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~  114 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTD  114 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHH
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHH
Confidence            345678888887776      445666666 588899999999999999999999999998  88999999999999999


Q ss_pred             HHHHHHHHhcCCC
Q psy13123         87 DLKRHIDAHLGVK   99 (129)
Q Consensus        87 ~l~~h~~~~~~~~   99 (129)
                      .|..|++.|++..
T Consensus       115 ~l~~H~~~h~~~~  127 (129)
T 2wbt_A          115 SALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHHHHHTTCCC
T ss_pred             HHHHHHHHHCCcc
Confidence            9999999998753

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.59  E-value=2.8e-16  Score=74.70  Aligned_cols=50  Identities=10%  Similarity=0.133  Sum_probs=46.1

Q ss_pred             ccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         80 KAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        80 ~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +.|.....|..|++.|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45677778888999999999999999999999999999999999999997

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.54  E-value=1.5e-14  Score=66.35  Aligned_cols=46  Identities=28%  Similarity=0.449  Sum_probs=42.5

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .+|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            1 GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3688899999999999999999999999999999999999999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1.3e-14  Score=66.54  Aligned_cols=46  Identities=24%  Similarity=0.369  Sum_probs=42.7

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .+|+++|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            1 GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3688999999999999999999999999999999999999999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=1.3e-14  Score=66.51  Aligned_cols=46  Identities=28%  Similarity=0.421  Sum_probs=42.4

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .+|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            1 GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3688899999999999999999999999999999999999999876

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=6.8e-15  Score=71.25  Aligned_cols=55  Identities=27%  Similarity=0.624  Sum_probs=38.4

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHH-HHhCC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHI-QAHGG   69 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~-~~~~~   69 (129)
                      +||.|..|++.|.....|..|++.|+++++|.|..|++.|.....|..|+ ..|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            35777777777777777777777777777777777777777777777775 34554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=2e-14  Score=75.79  Aligned_cols=68  Identities=25%  Similarity=0.389  Sum_probs=36.8

Q ss_pred             cccCcchhccCChhhHHHHHHH-hCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHh
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHV-HYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAH   95 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~-~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~   95 (129)
                      +.|..|++.|.....|..|++. |.++++..+..|                    ..|.|..|++.|.....|..|+++|
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c--------------------~~~~C~~C~k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC--------------------YWEECPREGKSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC--------------------CCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccce--------------------eccCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666665 555554111110                    0155666666666666666666666


Q ss_pred             cCCCcccCC
Q psy13123         96 LGVKKFACE  104 (129)
Q Consensus        96 ~~~~~~~C~  104 (129)
                      +++++|.|.
T Consensus        86 ~~~k~~~C~   94 (95)
T 2ej4_A           86 TGEKSGPSS   94 (95)
T ss_dssp             HTCCCCSSC
T ss_pred             CCCCCCCCC
Confidence            666666553

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=2.6e-18  Score=86.65  Aligned_cols=70  Identities=23%  Similarity=0.382  Sum_probs=47.8

Q ss_pred             hhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         30 FSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        30 ~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      ..|..|++.|.+++++.|..|++.|.....|..       +++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            345566667777777777777777776666554       5567777777777777777777777777777777655

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.2e-14  Score=73.16  Aligned_cols=60  Identities=27%  Similarity=0.698  Sum_probs=48.3

Q ss_pred             CCCCCCCCccccC--cchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHh
Q psy13123          8 DPLATTTSAYQCG--ECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAH   67 (129)
Q Consensus         8 ~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~   67 (129)
                      ..+++++++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            5667778888886  58888888888888888888888888888888888888888887655

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=2.5e-14  Score=65.54  Aligned_cols=45  Identities=29%  Similarity=0.482  Sum_probs=41.9

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999999876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=2.2e-14  Score=65.74  Aligned_cols=45  Identities=29%  Similarity=0.508  Sum_probs=42.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=2.1e-14  Score=65.85  Aligned_cols=45  Identities=31%  Similarity=0.555  Sum_probs=42.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|++++||.|..|++.|.....|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999999876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.7e-14  Score=66.16  Aligned_cols=45  Identities=27%  Similarity=0.491  Sum_probs=42.2

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            588899999999999999999999999999999999999999876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.9e-14  Score=65.99  Aligned_cols=45  Identities=29%  Similarity=0.470  Sum_probs=42.0

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=2e-14  Score=65.85  Aligned_cols=45  Identities=29%  Similarity=0.481  Sum_probs=42.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.6e-14  Score=66.20  Aligned_cols=45  Identities=27%  Similarity=0.410  Sum_probs=42.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.9e-14  Score=65.99  Aligned_cols=46  Identities=24%  Similarity=0.356  Sum_probs=42.4

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .+|+++|++++||.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            1 GSSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3688899999999999999999999999999999999999999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.5e-14  Score=66.32  Aligned_cols=46  Identities=26%  Similarity=0.440  Sum_probs=42.5

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      ..|+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            1 GSSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3688899999999999999999999999999999999999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.51  E-value=2.9e-14  Score=65.34  Aligned_cols=45  Identities=29%  Similarity=0.508  Sum_probs=41.8

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=2.6e-14  Score=65.51  Aligned_cols=45  Identities=24%  Similarity=0.375  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.9e-14  Score=66.00  Aligned_cols=45  Identities=27%  Similarity=0.470  Sum_probs=42.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            688899999999999999999999999999999999999999876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=2.3e-14  Score=65.70  Aligned_cols=45  Identities=24%  Similarity=0.334  Sum_probs=42.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999999876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.51  E-value=1.9e-14  Score=65.95  Aligned_cols=45  Identities=22%  Similarity=0.355  Sum_probs=42.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            688899999999999999999999999999999999999999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=2.2e-14  Score=65.12  Aligned_cols=44  Identities=18%  Similarity=0.230  Sum_probs=40.4

Q ss_pred             CCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          7 RDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         7 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      |+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=2.4e-14  Score=65.64  Aligned_cols=45  Identities=27%  Similarity=0.495  Sum_probs=41.9

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            588899999999999999999999999999999999999999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=2.6e-14  Score=65.52  Aligned_cols=45  Identities=27%  Similarity=0.392  Sum_probs=41.4

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999875

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.51  E-value=1.8e-14  Score=66.05  Aligned_cols=45  Identities=24%  Similarity=0.355  Sum_probs=42.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=2.2e-14  Score=65.76  Aligned_cols=45  Identities=29%  Similarity=0.438  Sum_probs=41.9

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588899999999999999999999999999999999999999876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=2.1e-14  Score=65.86  Aligned_cols=45  Identities=31%  Similarity=0.470  Sum_probs=42.2

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.7e-14  Score=66.12  Aligned_cols=45  Identities=31%  Similarity=0.514  Sum_probs=42.0

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588899999999999999999999999999999999999999876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=2.5e-14  Score=65.57  Aligned_cols=45  Identities=24%  Similarity=0.469  Sum_probs=41.8

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=2.4e-14  Score=65.62  Aligned_cols=45  Identities=29%  Similarity=0.505  Sum_probs=41.4

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.50  E-value=2.1e-14  Score=65.80  Aligned_cols=45  Identities=29%  Similarity=0.512  Sum_probs=41.9

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=3.2e-14  Score=65.21  Aligned_cols=45  Identities=22%  Similarity=0.352  Sum_probs=42.0

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588899999999999999999999999999999999999999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=2.2e-14  Score=65.72  Aligned_cols=45  Identities=27%  Similarity=0.487  Sum_probs=41.8

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=3.1e-14  Score=65.23  Aligned_cols=45  Identities=29%  Similarity=0.479  Sum_probs=42.2

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|++++||.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=2.5e-14  Score=65.59  Aligned_cols=45  Identities=29%  Similarity=0.460  Sum_probs=42.0

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=2.6e-14  Score=65.52  Aligned_cols=45  Identities=24%  Similarity=0.368  Sum_probs=42.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588899999999999999999999999999999999999999876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.3e-14  Score=65.71  Aligned_cols=45  Identities=31%  Similarity=0.487  Sum_probs=42.2

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.49  E-value=3.4e-14  Score=65.11  Aligned_cols=45  Identities=20%  Similarity=0.369  Sum_probs=41.9

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|.++|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=3.4e-14  Score=65.12  Aligned_cols=45  Identities=24%  Similarity=0.572  Sum_probs=42.0

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|++++||.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=3.5e-14  Score=65.10  Aligned_cols=45  Identities=27%  Similarity=0.440  Sum_probs=41.8

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|+++++|.|.+|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.8e-14  Score=65.38  Aligned_cols=45  Identities=27%  Similarity=0.502  Sum_probs=41.9

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=3.9e-14  Score=64.91  Aligned_cols=45  Identities=20%  Similarity=0.347  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=4.2e-14  Score=64.84  Aligned_cols=45  Identities=27%  Similarity=0.403  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.49  E-value=3e-14  Score=65.26  Aligned_cols=45  Identities=29%  Similarity=0.417  Sum_probs=42.0

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=4.2e-14  Score=65.07  Aligned_cols=46  Identities=28%  Similarity=0.404  Sum_probs=42.5

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHH-HhCCCCCccCCcc
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLH-VHYGSSNYKCPLC   50 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~~~~~c~~c   50 (129)
                      ..|+++|++++||.|..|++.|.....|..|++ .|++++||.|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            1 GSSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            368899999999999999999999999999999 9999999999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.9e-14  Score=65.95  Aligned_cols=45  Identities=27%  Similarity=0.544  Sum_probs=42.4

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|+++++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688899999999999999999999999999999999999999876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=2.3e-14  Score=70.70  Aligned_cols=60  Identities=17%  Similarity=0.298  Sum_probs=45.8

Q ss_pred             CCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC-cchhhhcchhHHHHHHHHhCCCCC
Q psy13123         11 ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP-LCGKFFIQLCHMKDHIQAHGGLKP   72 (129)
Q Consensus        11 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~-~c~~~~~~~~~l~~~~~~~~~~~~   72 (129)
                      ..+++||.|..|++.|. ...|..|+++ ++++|+.|. .|++.|.....|..|++.|...++
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            45667788888888888 7888888877 778888888 788888887778888777665543

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=3.3e-14  Score=65.14  Aligned_cols=45  Identities=29%  Similarity=0.435  Sum_probs=41.8

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=5.1e-14  Score=64.51  Aligned_cols=45  Identities=27%  Similarity=0.387  Sum_probs=41.3

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999876

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.48  E-value=6.1e-14  Score=70.31  Aligned_cols=57  Identities=35%  Similarity=0.755  Sum_probs=50.7

Q ss_pred             hCCCCCeeccc--ccccccChhHHHHHHHHhcCCCcccCCc--cccccCCHHHHHHHHHHh
Q psy13123         67 HGGLKPYVCTY--CGKAFVRASDLKRHIDAHLGVKKFACET--CGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus        67 ~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h  123 (129)
                      ....++|.|..  |++.|.....|..|++.|+++++|.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            44567899988  9999999999999999999999999964  999999999999998876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=5e-14  Score=64.54  Aligned_cols=45  Identities=27%  Similarity=0.496  Sum_probs=41.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|.++|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=3.7e-14  Score=64.98  Aligned_cols=45  Identities=29%  Similarity=0.539  Sum_probs=42.0

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=4.7e-14  Score=64.62  Aligned_cols=45  Identities=29%  Similarity=0.495  Sum_probs=41.4

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      +|+++|+++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588899999999999999999999999999999999999999764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.2e-13  Score=63.31  Aligned_cols=45  Identities=24%  Similarity=0.521  Sum_probs=41.3

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999764

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.8e-14  Score=64.78  Aligned_cols=38  Identities=24%  Similarity=0.458  Sum_probs=30.5

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|.+|++.|...+.|..|+++|++++||
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGP   39 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            34577788888888888888888888888888888876

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.46  E-value=1.4e-14  Score=65.16  Aligned_cols=38  Identities=37%  Similarity=0.654  Sum_probs=30.3

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGP   39 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCC
Confidence            34577788888888888888888888888888888876

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.6e-14  Score=65.63  Aligned_cols=39  Identities=36%  Similarity=0.507  Sum_probs=34.2

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGP   41 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCC
Confidence            456688889999999999999999999999999999987

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.8e-13  Score=62.62  Aligned_cols=44  Identities=27%  Similarity=0.427  Sum_probs=40.8

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68889999999999999999999999999999999999999964

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=2.1e-14  Score=65.82  Aligned_cols=39  Identities=33%  Similarity=0.612  Sum_probs=25.7

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPS   41 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            344566666666666666666666666666666666665

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.44  E-value=2e-13  Score=62.47  Aligned_cols=44  Identities=25%  Similarity=0.478  Sum_probs=40.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999964

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.9e-13  Score=62.53  Aligned_cols=44  Identities=30%  Similarity=0.484  Sum_probs=40.8

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999964

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.6e-14  Score=64.92  Aligned_cols=39  Identities=33%  Similarity=0.541  Sum_probs=33.8

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            345678889999999999999999999999999999887

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.9e-13  Score=62.53  Aligned_cols=45  Identities=27%  Similarity=0.531  Sum_probs=41.2

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .+|+++|+++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            1 GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            368889999999999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.7e-13  Score=62.72  Aligned_cols=45  Identities=24%  Similarity=0.460  Sum_probs=41.2

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      +.|+++|++++||.|..|++.|.....|..|++.|++++||.|+.
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            1 GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            368889999999999999999999999999999999999999964

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.43  E-value=3.1e-14  Score=65.27  Aligned_cols=36  Identities=39%  Similarity=0.680  Sum_probs=18.1

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emk_A            6 SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPS   41 (46)
T ss_dssp             CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCS
T ss_pred             ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            344445555555555555555555555555555444

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2e-13  Score=62.45  Aligned_cols=45  Identities=29%  Similarity=0.423  Sum_probs=41.2

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .+|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            1 GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CCSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CCccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            368889999999999999999999999999999999999999863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.8e-14  Score=65.43  Aligned_cols=38  Identities=32%  Similarity=0.508  Sum_probs=26.1

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSS   41 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCC
Confidence            44566667777777777777777777777777777665

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.43  E-value=2.5e-14  Score=65.58  Aligned_cols=38  Identities=39%  Similarity=0.602  Sum_probs=23.4

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|.+|++.|...+.|..|+++|++++||
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emj_A            4 GSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSS
T ss_pred             CCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            34455566666666666666666666666666666655

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.6e-13  Score=62.08  Aligned_cols=44  Identities=25%  Similarity=0.446  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      +|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2e-13  Score=62.49  Aligned_cols=44  Identities=30%  Similarity=0.480  Sum_probs=40.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999964

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.43  E-value=2.9e-14  Score=64.04  Aligned_cols=38  Identities=24%  Similarity=0.454  Sum_probs=32.8

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~   40 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS   40 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCC
Confidence            45677888999999999999999999999999998887

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.43  E-value=1.2e-13  Score=65.39  Aligned_cols=49  Identities=29%  Similarity=0.467  Sum_probs=42.5

Q ss_pred             CCCCCCCCccccCcchhccCChhhHHHHHH-HhCCCCCccCCcchhhhcc
Q psy13123          8 DPLATTTSAYQCGECGKQFTRKFSLNAHLH-VHYGSSNYKCPLCGKFFIQ   56 (129)
Q Consensus         8 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~~~~~c~~c~~~~~~   56 (129)
                      ...+++++||.|..|++.|.....|..|++ +|+++++|.|..|++.|.+
T Consensus         4 ~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            4 GSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            456788899999999999999999999987 8989999999999988764

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.4e-14  Score=65.15  Aligned_cols=39  Identities=36%  Similarity=0.658  Sum_probs=34.7

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            455688899999999999999999999999999999987

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=2.6e-13  Score=62.12  Aligned_cols=44  Identities=32%  Similarity=0.446  Sum_probs=40.4

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999863

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.8e-14  Score=64.94  Aligned_cols=42  Identities=36%  Similarity=0.581  Sum_probs=22.3

Q ss_pred             HHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         65 QAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        65 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      +.|+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345555555555555555555555555555555555555443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.4e-13  Score=61.56  Aligned_cols=43  Identities=30%  Similarity=0.495  Sum_probs=39.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      .|+++|+++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999999999884

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.1e-14  Score=65.26  Aligned_cols=39  Identities=36%  Similarity=0.593  Sum_probs=29.0

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPS   41 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            445567777777777777777777777777777777776

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.9e-13  Score=62.55  Aligned_cols=44  Identities=32%  Similarity=0.536  Sum_probs=40.8

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999963

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.4e-14  Score=64.48  Aligned_cols=39  Identities=36%  Similarity=0.614  Sum_probs=30.0

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGP   41 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCS
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCC
Confidence            445677777888888888888888888888888887776

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=2.4e-14  Score=64.39  Aligned_cols=39  Identities=33%  Similarity=0.596  Sum_probs=34.2

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            345678889999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.42  E-value=3.2e-14  Score=65.21  Aligned_cols=40  Identities=38%  Similarity=0.606  Sum_probs=19.5

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET  105 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~  105 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3444444555555555544444555544444444444443

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.3e-14  Score=65.16  Aligned_cols=38  Identities=34%  Similarity=0.592  Sum_probs=23.3

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ++.|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPS   41 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            34455566666666666666666666666666666655

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.2e-14  Score=65.20  Aligned_cols=38  Identities=34%  Similarity=0.628  Sum_probs=24.0

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPS   41 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCS
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCC
Confidence            34455666666666666666666666666666666665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.8e-14  Score=65.39  Aligned_cols=37  Identities=38%  Similarity=0.701  Sum_probs=19.8

Q ss_pred             HHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         93 DAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        93 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPS   41 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCS
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            3445555555555555555555555555555555554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3e-14  Score=65.32  Aligned_cols=39  Identities=31%  Similarity=0.557  Sum_probs=26.8

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCC
Confidence            344566677777777777777777777777777777765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.2e-14  Score=65.18  Aligned_cols=37  Identities=32%  Similarity=0.643  Sum_probs=20.5

Q ss_pred             HHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         93 DAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        93 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCC
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCC
Confidence            3445555555555555555555555555555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.6e-14  Score=65.02  Aligned_cols=39  Identities=38%  Similarity=0.634  Sum_probs=29.0

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPS   41 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCS
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            445567777777777777777777777777777777776

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.42  E-value=2.1e-13  Score=64.61  Aligned_cols=46  Identities=35%  Similarity=0.585  Sum_probs=39.0

Q ss_pred             hCCCCCeecccccccccChhHHHHHHH-HhcCCCcccCCccccccCC
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHID-AHLGVKKFACETCGKLFSS  112 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~~~C~~C~~~f~~  112 (129)
                      +.++++|.|..|++.|.....|..|++ .|+++++|.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            567788888888888888888888886 7888888999889888865

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.6e-14  Score=65.04  Aligned_cols=42  Identities=38%  Similarity=0.600  Sum_probs=21.7

Q ss_pred             HHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         65 QAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        65 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      +.|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            5 SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344455555555555555555555555555555555555443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.7e-14  Score=64.64  Aligned_cols=38  Identities=34%  Similarity=0.571  Sum_probs=26.0

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPS   41 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCC
Confidence            34566667777777777777777777777777777665

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.4e-14  Score=65.65  Aligned_cols=39  Identities=33%  Similarity=0.614  Sum_probs=26.5

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPS   41 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCC
Confidence            344566667777777777777777777777777777665

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3e-14  Score=64.67  Aligned_cols=39  Identities=41%  Similarity=0.679  Sum_probs=31.9

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |++.|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGP   41 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSS
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCC
Confidence            455677888888888888888888888888888888886

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.6e-14  Score=65.01  Aligned_cols=42  Identities=36%  Similarity=0.498  Sum_probs=22.3

Q ss_pred             HHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         65 QAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        65 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      +.|+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            5 SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            344555555555555555555555555555555555555443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.5e-14  Score=65.08  Aligned_cols=42  Identities=36%  Similarity=0.563  Sum_probs=21.7

Q ss_pred             HHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         65 QAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        65 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      +.|+++++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            334455555555555555555555555555555555555443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.2e-14  Score=65.18  Aligned_cols=39  Identities=33%  Similarity=0.634  Sum_probs=25.8

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPS   41 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCC
Confidence            344566666677767777777777777776667666665

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.8e-13  Score=61.97  Aligned_cols=44  Identities=30%  Similarity=0.475  Sum_probs=40.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999964

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.7e-14  Score=64.96  Aligned_cols=39  Identities=36%  Similarity=0.604  Sum_probs=25.8

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPS   41 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            344566666677767777777777777777667666665

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.7e-13  Score=62.04  Aligned_cols=44  Identities=30%  Similarity=0.531  Sum_probs=40.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.3e-14  Score=65.17  Aligned_cols=39  Identities=36%  Similarity=0.635  Sum_probs=26.9

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPS   41 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            344566677777777777777777777777777777765

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.1e-13  Score=61.81  Aligned_cols=43  Identities=33%  Similarity=0.590  Sum_probs=40.3

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5888999999999999999999999999999999999999986

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.4e-13  Score=62.19  Aligned_cols=44  Identities=30%  Similarity=0.494  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.42  E-value=2.3e-13  Score=61.97  Aligned_cols=43  Identities=30%  Similarity=0.544  Sum_probs=38.5

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcch
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCG   51 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~   51 (129)
                      .+|++++||.|.+|++.|.....|..|+++|++++++.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4678889999999999999999999999999999999998885

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.42  E-value=3.5e-14  Score=65.08  Aligned_cols=37  Identities=30%  Similarity=0.598  Sum_probs=19.7

Q ss_pred             HHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         93 DAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        93 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPS   41 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCS
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCc
Confidence            3444555555555555555555555555555555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.42  E-value=2.1e-14  Score=70.00  Aligned_cols=53  Identities=15%  Similarity=0.320  Sum_probs=45.8

Q ss_pred             CCCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhH
Q psy13123          4 IRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCH   59 (129)
Q Consensus         4 l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~   59 (129)
                      |..|+++|++++||.|+.|++.|.....|.   +.|+++++|.|..|++.|....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            778999999999999999999998877765   78889999999999998876654

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.5e-13  Score=61.67  Aligned_cols=44  Identities=27%  Similarity=0.432  Sum_probs=40.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999863

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.8e-14  Score=65.41  Aligned_cols=37  Identities=32%  Similarity=0.651  Sum_probs=19.7

Q ss_pred             HHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         93 DAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        93 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ep3_A            5 SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPS   41 (46)
T ss_dssp             SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCC
T ss_pred             CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            3445555555555555555555555555555555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.42  E-value=2.2e-13  Score=61.08  Aligned_cols=42  Identities=33%  Similarity=0.566  Sum_probs=37.8

Q ss_pred             CCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          7 RDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         7 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      |+++|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567889999999999999999999999999999999998884

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.4e-14  Score=64.72  Aligned_cols=41  Identities=34%  Similarity=0.554  Sum_probs=20.2

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            6 SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444455555555555555555555555555555554443

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=3e-13  Score=61.29  Aligned_cols=43  Identities=19%  Similarity=0.368  Sum_probs=39.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      +|+++|++++||.|..|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5788999999999999999999999999999999999999884

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.6e-14  Score=65.05  Aligned_cols=38  Identities=37%  Similarity=0.719  Sum_probs=23.6

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yto_A            4 GSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHS   41 (46)
T ss_dssp             CCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBT
T ss_pred             ccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCC
Confidence            34455666666666666666666666666666666655

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.3e-13  Score=60.51  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=37.4

Q ss_pred             CCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          7 RDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         7 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      |+++|++++||.|..|++.|.....|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567889999999999999999999999999999999998874

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.7e-13  Score=62.05  Aligned_cols=44  Identities=27%  Similarity=0.489  Sum_probs=40.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999964

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.8e-14  Score=65.39  Aligned_cols=38  Identities=32%  Similarity=0.559  Sum_probs=22.5

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoz_A            4 GSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLS   41 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSS
T ss_pred             cccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCC
Confidence            34455556666666666666666666666666666554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.4e-13  Score=62.22  Aligned_cols=44  Identities=32%  Similarity=0.517  Sum_probs=40.4

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      +|+++|+++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999864

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.6e-13  Score=62.06  Aligned_cols=44  Identities=32%  Similarity=0.595  Sum_probs=40.8

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      +|+++|+++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68889999999999999999999999999999999999999963

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=4.1e-14  Score=64.83  Aligned_cols=42  Identities=36%  Similarity=0.606  Sum_probs=22.4

Q ss_pred             HHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         65 QAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        65 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      ..|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            344555555555555555555555555555555555555443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=4.2e-14  Score=64.77  Aligned_cols=38  Identities=37%  Similarity=0.614  Sum_probs=23.4

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ++.|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   41 (46)
T 2eor_A            4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPS   41 (46)
T ss_dssp             SSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCS
T ss_pred             CcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCC
Confidence            34455666666666666666666666666666666655

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.3e-13  Score=62.25  Aligned_cols=44  Identities=32%  Similarity=0.522  Sum_probs=40.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            57889999999999999999999999999999999999999964

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=5e-14  Score=64.56  Aligned_cols=37  Identities=32%  Similarity=0.583  Sum_probs=20.0

Q ss_pred             HHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         93 DAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        93 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ++|+++++|.|..|++.|...+.|..|+++|++++||
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTS   41 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCC
Confidence            3445555555555555555555555555555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.4e-13  Score=62.21  Aligned_cols=45  Identities=24%  Similarity=0.369  Sum_probs=40.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .+.++|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 s~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            356789999999999999999999999999999999999999876

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.8e-13  Score=61.98  Aligned_cols=44  Identities=25%  Similarity=0.409  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.3e-14  Score=65.17  Aligned_cols=39  Identities=31%  Similarity=0.568  Sum_probs=27.2

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCC
Confidence            344566677777777777777777777777777777765

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.41  E-value=3.1e-14  Score=65.24  Aligned_cols=36  Identities=39%  Similarity=0.648  Sum_probs=18.5

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      .|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2el4_A            6 SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPS   41 (46)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCS
T ss_pred             CCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            344455555555555555555555555555555544

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.6e-14  Score=65.03  Aligned_cols=39  Identities=36%  Similarity=0.583  Sum_probs=27.3

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~   41 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPS   41 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSS
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCc
Confidence            344566677777777777777777777777777777765

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.7e-14  Score=64.97  Aligned_cols=39  Identities=33%  Similarity=0.622  Sum_probs=26.0

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |++.|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPS   41 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCS
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCC
Confidence            344566666677777777777777777777777766665

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=4.5e-14  Score=64.71  Aligned_cols=36  Identities=47%  Similarity=0.761  Sum_probs=17.7

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPS   41 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSS
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCC
Confidence            344444555555555555555555555555544443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.6e-13  Score=62.05  Aligned_cols=44  Identities=27%  Similarity=0.491  Sum_probs=40.3

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999864

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=3.1e-14  Score=64.65  Aligned_cols=39  Identities=26%  Similarity=0.497  Sum_probs=28.5

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP   41 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSS
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCC
Confidence            345566777777777777777777777777777777776

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.3e-13  Score=61.72  Aligned_cols=44  Identities=30%  Similarity=0.535  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      +|+++|++++||.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.5e-13  Score=61.49  Aligned_cols=43  Identities=33%  Similarity=0.489  Sum_probs=39.6

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      .|+++|+++++|.|..|++.|.....|..|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5788999999999999999999999999999999999999884

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.9e-14  Score=64.90  Aligned_cols=38  Identities=39%  Similarity=0.621  Sum_probs=22.9

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ++.|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPS   41 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSS
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            34455566666666666666666666666666666654

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.7e-14  Score=64.98  Aligned_cols=41  Identities=39%  Similarity=0.645  Sum_probs=21.1

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=4.4e-14  Score=64.75  Aligned_cols=39  Identities=31%  Similarity=0.521  Sum_probs=27.2

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSS   41 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            344566677777777777777777777777777777765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.6e-14  Score=65.02  Aligned_cols=42  Identities=38%  Similarity=0.580  Sum_probs=21.6

Q ss_pred             HHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         65 QAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        65 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      +.|+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            5 SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            344455555555555555555555555555555555555443

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=5e-14  Score=64.56  Aligned_cols=36  Identities=39%  Similarity=0.692  Sum_probs=18.5

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em2_A            6 SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPS   41 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSS
T ss_pred             CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCC
Confidence            344455555555555555555555555555555544

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.8e-14  Score=64.94  Aligned_cols=39  Identities=31%  Similarity=0.549  Sum_probs=26.1

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCS
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCC
Confidence            344566666777777777777777777777777776665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=5.5e-14  Score=64.41  Aligned_cols=41  Identities=34%  Similarity=0.536  Sum_probs=21.0

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            6 SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555443

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=4.2e-14  Score=64.82  Aligned_cols=38  Identities=32%  Similarity=0.542  Sum_probs=27.1

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|.+|++.|...+.|..|+++|++++||
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPS   41 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSC
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCC
Confidence            44566677777777777777777777777777777765

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.6e-14  Score=65.03  Aligned_cols=41  Identities=41%  Similarity=0.611  Sum_probs=20.6

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444555555555555555555555555555555555443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=4.7e-14  Score=64.63  Aligned_cols=41  Identities=34%  Similarity=0.533  Sum_probs=20.6

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444555555555555555555555555555555555443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=4.6e-14  Score=64.67  Aligned_cols=36  Identities=36%  Similarity=0.612  Sum_probs=18.1

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPS   41 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCS
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            344445555555555555555555555555555443

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=4.6e-14  Score=64.64  Aligned_cols=41  Identities=32%  Similarity=0.428  Sum_probs=20.8

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555443

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.4e-14  Score=64.48  Aligned_cols=39  Identities=33%  Similarity=0.598  Sum_probs=30.0

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGP   41 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCC
Confidence            445677778888888888888888888888888887776

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=7.6e-14  Score=63.33  Aligned_cols=38  Identities=26%  Similarity=0.402  Sum_probs=29.9

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ++.|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGP   41 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCC
Confidence            34567778888888888888888888888888888876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=5.3e-14  Score=64.44  Aligned_cols=41  Identities=41%  Similarity=0.656  Sum_probs=19.7

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=5.4e-14  Score=63.80  Aligned_cols=39  Identities=21%  Similarity=0.387  Sum_probs=31.3

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |++.|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGP   41 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCT
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCc
Confidence            445677788888888888888888888888888888876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.39  E-value=5.7e-14  Score=64.34  Aligned_cols=41  Identities=39%  Similarity=0.561  Sum_probs=20.2

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            6 SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34444455555555555555555555545555555554443

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.39  E-value=2.9e-13  Score=66.05  Aligned_cols=35  Identities=20%  Similarity=0.374  Sum_probs=29.3

Q ss_pred             hcCCCcccCCc--cccccCCHHHHHHHH-HHhcccCCC
Q psy13123         95 HLGVKKFACET--CGKLFSSKHGLKYHV-RTHKGECKR  129 (129)
Q Consensus        95 ~~~~~~~~C~~--C~~~f~~~~~l~~h~-~~h~~e~p~  129 (129)
                      ..+++||+|..  |+++|.+.++|..|+ ++|++|+||
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~   59 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPA   59 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCc
Confidence            46788999964  999999999999996 689999887

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=4.2e-13  Score=60.77  Aligned_cols=43  Identities=21%  Similarity=0.360  Sum_probs=40.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      .|+++|++++||.|..|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5888999999999999999999999999999999999999884

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.4e-14  Score=64.70  Aligned_cols=38  Identities=37%  Similarity=0.629  Sum_probs=24.5

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSS
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCC
Confidence            34556666666666666666666666666666666665

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.4e-13  Score=62.21  Aligned_cols=45  Identities=24%  Similarity=0.433  Sum_probs=40.2

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      ...++|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         2 ~~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            346788999999999999999999999999999999999999876

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.4e-13  Score=60.98  Aligned_cols=42  Identities=33%  Similarity=0.563  Sum_probs=38.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKC   47 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c   47 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999999999877

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.9e-13  Score=61.46  Aligned_cols=44  Identities=27%  Similarity=0.513  Sum_probs=40.6

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999863

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.4e-13  Score=61.72  Aligned_cols=44  Identities=27%  Similarity=0.400  Sum_probs=40.2

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|+++|++++||.|.+|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999864

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.9e-14  Score=64.29  Aligned_cols=42  Identities=33%  Similarity=0.585  Sum_probs=21.5

Q ss_pred             HHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         65 QAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        65 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      +.|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            5 SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344455555555555555555555555555555555555443

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.9e-14  Score=64.89  Aligned_cols=39  Identities=31%  Similarity=0.466  Sum_probs=25.1

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPS   41 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCC
Confidence            344556666666666666666666666666666666665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=4.8e-14  Score=64.59  Aligned_cols=41  Identities=32%  Similarity=0.471  Sum_probs=20.8

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|+++|+++++|.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555443

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.39  E-value=2.8e-13  Score=59.79  Aligned_cols=35  Identities=23%  Similarity=0.506  Sum_probs=30.1

Q ss_pred             hcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        95 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            45788899999999999999999999999999887

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3e-13  Score=61.25  Aligned_cols=43  Identities=35%  Similarity=0.566  Sum_probs=39.5

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      .|+++|++++||.|..|++.|.....|..|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5788999999999999999999999999999999999999884

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.3e-13  Score=61.74  Aligned_cols=44  Identities=25%  Similarity=0.496  Sum_probs=40.4

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999863

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5.3e-14  Score=64.46  Aligned_cols=38  Identities=34%  Similarity=0.588  Sum_probs=27.3

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      ++.|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPS   41 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCC
Confidence            34566677777777777777777777777777777775

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.38  E-value=5.5e-13  Score=59.75  Aligned_cols=41  Identities=29%  Similarity=0.464  Sum_probs=37.5

Q ss_pred             CCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccC
Q psy13123          7 RDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKC   47 (129)
Q Consensus         7 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c   47 (129)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            67889999999999999999999999999999999999877

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.9e-13  Score=60.89  Aligned_cols=43  Identities=35%  Similarity=0.633  Sum_probs=40.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5888999999999999999999999999999999999999884

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.4e-13  Score=62.45  Aligned_cols=39  Identities=33%  Similarity=0.485  Sum_probs=18.6

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET  105 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~  105 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|..
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444444444444444444444444444444444444443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.38  E-value=7.2e-13  Score=66.33  Aligned_cols=60  Identities=22%  Similarity=0.493  Sum_probs=46.6

Q ss_pred             CCCCCCCCCccccCc--chhccCChhhHHHHHHHhCCCCCccCCc--chhhhcchhHHHHHHHH
Q psy13123          7 RDPLATTTSAYQCGE--CGKQFTRKFSLNAHLHVHYGSSNYKCPL--CGKFFIQLCHMKDHIQA   66 (129)
Q Consensus         7 ~~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~~~~~   66 (129)
                      .....+..++|.|..  |++.|.....|..|++.|+++++|.|..  |++.|.....|..|++.
T Consensus         8 ~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A            8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             CCCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            455566777888877  8888888888888888888888888854  88888888888777643

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.6e-13  Score=62.80  Aligned_cols=41  Identities=29%  Similarity=0.549  Sum_probs=19.6

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.6e-13  Score=60.38  Aligned_cols=41  Identities=27%  Similarity=0.517  Sum_probs=37.8

Q ss_pred             CCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccC
Q psy13123          7 RDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKC   47 (129)
Q Consensus         7 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c   47 (129)
                      |+++|++++||.|..|++.|.....|..|++.|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67889999999999999999999999999999999999876

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.5e-14  Score=64.37  Aligned_cols=39  Identities=31%  Similarity=0.565  Sum_probs=25.4

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++|+++++|.|..|++.|...+.|..|+++|++++||
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPS   41 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCC
Confidence            334556666666666666666666666666666666665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.6e-13  Score=62.83  Aligned_cols=41  Identities=39%  Similarity=0.694  Sum_probs=20.4

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            6 SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444555555555555555555555555555555555443

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.37  E-value=1.6e-13  Score=62.86  Aligned_cols=40  Identities=38%  Similarity=0.586  Sum_probs=18.9

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444444444444444444444444444444444444433

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.37  E-value=3.5e-13  Score=62.26  Aligned_cols=45  Identities=27%  Similarity=0.434  Sum_probs=40.2

Q ss_pred             CCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchh
Q psy13123          8 DPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGK   52 (129)
Q Consensus         8 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~   52 (129)
                      -..++++++|.|.+|++.|.....|..|+++|+++++|.|..|++
T Consensus         4 ~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CSCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            356788899999999999999999999999999999999999874

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.8e-13  Score=62.64  Aligned_cols=39  Identities=38%  Similarity=0.686  Sum_probs=18.2

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET  105 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~  105 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444444444444444444444444444444444444443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.7e-13  Score=62.76  Aligned_cols=40  Identities=35%  Similarity=0.625  Sum_probs=19.0

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET  105 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~  105 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            6 SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            3444444444444444444444444444444444444443

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=6.4e-13  Score=60.75  Aligned_cols=43  Identities=16%  Similarity=0.348  Sum_probs=40.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCC-CCCccCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYG-SSNYKCP   48 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~-~~~~~c~   48 (129)
                      .|+++|++++||.|..|++.|.....|..|+++|++ +++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            578899999999999999999999999999999999 9999986

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.4e-13  Score=62.95  Aligned_cols=39  Identities=38%  Similarity=0.625  Sum_probs=17.8

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET  105 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~  105 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             cCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            444444444444444444444444444444444444443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=3.2e-13  Score=60.27  Aligned_cols=36  Identities=33%  Similarity=0.679  Sum_probs=32.1

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS   39 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCS
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCc
Confidence            467889999999999999999999999999999887

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.2e-13  Score=61.04  Aligned_cols=43  Identities=28%  Similarity=0.437  Sum_probs=40.0

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      .|+++|++++||.|..|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999999999986

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.1e-13  Score=62.38  Aligned_cols=39  Identities=38%  Similarity=0.691  Sum_probs=18.3

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET  105 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~  105 (129)
                      |+++++|.|..|++.|.....|..|+++|+++++|.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             cCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            444444444444444444444444444444444444443

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=4.8e-13  Score=59.98  Aligned_cols=41  Identities=27%  Similarity=0.517  Sum_probs=37.5

Q ss_pred             CCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccC
Q psy13123          7 RDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKC   47 (129)
Q Consensus         7 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c   47 (129)
                      |+++|++++||.|..|++.|.....|..|++.|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67889999999999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.3e-13  Score=62.28  Aligned_cols=39  Identities=36%  Similarity=0.651  Sum_probs=17.0

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET  105 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~  105 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|..
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            334444444444444444444444444444444444443

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=9.2e-13  Score=60.22  Aligned_cols=44  Identities=27%  Similarity=0.441  Sum_probs=40.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      .|.++|+++++|.|..|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999863

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.7e-14  Score=64.36  Aligned_cols=38  Identities=24%  Similarity=0.457  Sum_probs=26.5

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +++|+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (44)
T 2eox_A            4 GSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGP   41 (44)
T ss_dssp             CCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCC
T ss_pred             CcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCC
Confidence            44566677777777777777777777777777777765

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.3e-12  Score=59.17  Aligned_cols=43  Identities=26%  Similarity=0.417  Sum_probs=38.7

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      .|.++|+++++|.|.+|++.|.....|..|++.|+++++|.|.
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4678899999999999999999999999999999999998884

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.3e-13  Score=63.39  Aligned_cols=40  Identities=40%  Similarity=0.680  Sum_probs=19.0

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHH-HhcCCCcccCCc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHID-AHLGVKKFACET  105 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~~~C~~  105 (129)
                      .|+++++|.|..|++.|.....|..|++ .|+++++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            3444444444444444444444444444 444444444443

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=2.7e-13  Score=62.05  Aligned_cols=36  Identities=31%  Similarity=0.577  Sum_probs=24.7

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      .|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPS   41 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCS
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCC
Confidence            456666777777777777777777777777777665

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.4e-13  Score=62.16  Aligned_cols=41  Identities=44%  Similarity=0.745  Sum_probs=18.9

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444433

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=2.8e-13  Score=61.99  Aligned_cols=39  Identities=33%  Similarity=0.553  Sum_probs=18.2

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET  105 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~  105 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            444444444444444444444444444444444444443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.3e-13  Score=62.24  Aligned_cols=41  Identities=37%  Similarity=0.503  Sum_probs=20.0

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            6 SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444445555555555555555555544544555544443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2.1e-13  Score=59.45  Aligned_cols=35  Identities=26%  Similarity=0.524  Sum_probs=32.6

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccCC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECK  128 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p  128 (129)
                      +|+++++|.|..|++.|...+.|..|+++|++|+|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            57889999999999999999999999999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2.2e-12  Score=58.94  Aligned_cols=44  Identities=18%  Similarity=0.336  Sum_probs=38.9

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      ...++|+++++|.|..|++.|.....|..|++.|++++||.|..
T Consensus         2 ~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            35678899999999999999999999999999999999999863

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=8.8e-14  Score=63.70  Aligned_cols=38  Identities=29%  Similarity=0.346  Sum_probs=25.5

Q ss_pred             HHHhcCCCcccCCccccccCCHHHHHHHHHHhcc-cCCC
Q psy13123         92 IDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKG-ECKR  129 (129)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~-e~p~  129 (129)
                      +++|+++++|.|..|++.|...+.|..|+++|++ ++||
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSG   42 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTS
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCC
Confidence            4456666677777777777777777777777766 6665

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3.1e-13  Score=61.81  Aligned_cols=39  Identities=26%  Similarity=0.382  Sum_probs=17.4

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET  105 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~  105 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|..
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            7 GSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             SSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             cCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            344444444444444444444444444444444444443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=8.9e-13  Score=59.42  Aligned_cols=35  Identities=26%  Similarity=0.414  Sum_probs=24.4

Q ss_pred             hcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        95 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSG   39 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCS
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCc
Confidence            55666777777777777777777777777777665

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.6e-13  Score=62.09  Aligned_cols=41  Identities=37%  Similarity=0.571  Sum_probs=20.0

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            6 SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            34444445555555555555555555555544555544443

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.2e-12  Score=60.27  Aligned_cols=45  Identities=22%  Similarity=0.351  Sum_probs=41.1

Q ss_pred             CCCCCCCCCCccccC--cchhccCChhhHHHHHHHhCCCCCccCCcc
Q psy13123          6 PRDPLATTTSAYQCG--ECGKQFTRKFSLNAHLHVHYGSSNYKCPLC   50 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c   50 (129)
                      .+.++|+++++|.|.  .|++.|.....|..|+++|+++++|.|..|
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467889999999998  899999999999999999999999999876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.8e-13  Score=62.60  Aligned_cols=41  Identities=39%  Similarity=0.630  Sum_probs=19.8

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444445555555555444445555444444445444443

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=1.9e-13  Score=62.53  Aligned_cols=40  Identities=28%  Similarity=0.421  Sum_probs=18.7

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4444444444444444444444444444444444444433

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.6e-12  Score=58.80  Aligned_cols=42  Identities=31%  Similarity=0.502  Sum_probs=38.9

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKC   47 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c   47 (129)
                      .|+++|++++||.|.+|++.|.....|..|++.|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            578899999999999999999999999999999999998876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.34  E-value=3e-13  Score=61.89  Aligned_cols=39  Identities=28%  Similarity=0.464  Sum_probs=18.4

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACET  105 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~  105 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|..
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            444444444444444444444444444444444444443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=55.66  Aligned_cols=31  Identities=32%  Similarity=0.495  Sum_probs=29.0

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +||.|.+|++.|...+.|..|+++|++|+||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5789999999999999999999999999987

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.33  E-value=8.5e-13  Score=56.70  Aligned_cols=34  Identities=29%  Similarity=0.557  Sum_probs=31.8

Q ss_pred             hcCCCcccCCccccccCCHHHHHHHHHHhcccCC
Q psy13123         95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGECK  128 (129)
Q Consensus        95 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p  128 (129)
                      |+++++|.|..|++.|.+.+.|..|+++|++|+|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            6788999999999999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.6e-13  Score=61.62  Aligned_cols=40  Identities=38%  Similarity=0.587  Sum_probs=18.9

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|..|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4444444444444444444444444444444444444433

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.33  E-value=2.3e-12  Score=58.06  Aligned_cols=41  Identities=20%  Similarity=0.290  Sum_probs=36.4

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCc
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPL   49 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~   49 (129)
                      ++|+++++|.|..|++.|.....|..|++.|+++++|.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            57888999999999999999999999999999999998863

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2e-13  Score=62.47  Aligned_cols=41  Identities=29%  Similarity=0.532  Sum_probs=20.2

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            34444455555555555555555555555555555554443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.7e-12  Score=59.03  Aligned_cols=43  Identities=26%  Similarity=0.492  Sum_probs=39.1

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      .+.++|+++++|.|..|++.|.....|..|+++|+++++|.|+
T Consensus         2 s~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            3567889999999999999999999999999999999999986

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.32  E-value=1.1e-12  Score=56.42  Aligned_cols=34  Identities=24%  Similarity=0.524  Sum_probs=31.9

Q ss_pred             hcCCCcccCCccccccCCHHHHHHHHHHhcccCC
Q psy13123         95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGECK  128 (129)
Q Consensus        95 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p  128 (129)
                      |+++++|.|.+|++.|...+.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            6789999999999999999999999999999987

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.8e-13  Score=61.19  Aligned_cols=35  Identities=37%  Similarity=0.537  Sum_probs=18.0

Q ss_pred             hcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        95 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++++|.|.+|++.|...+.|..|+++|++|+||
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPS   41 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            44445555555555555555555555555555544

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.9e-13  Score=62.58  Aligned_cols=40  Identities=30%  Similarity=0.539  Sum_probs=18.6

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      |+++++|.|..|++.|.....|..|+++|+++++|.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444444444444444444444444444444444444433

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=1.9e-12  Score=56.65  Aligned_cols=35  Identities=29%  Similarity=0.468  Sum_probs=32.1

Q ss_pred             hcCCCcccCC--ccccccCCHHHHHHHHHHhcccCCC
Q psy13123         95 HLGVKKFACE--TCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        95 ~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |+++++|.|.  .|++.|...+.|..|+++|++|+||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4678999999  5999999999999999999999997

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=1.5e-12  Score=60.06  Aligned_cols=42  Identities=29%  Similarity=0.457  Sum_probs=32.2

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcccc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGK  108 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~  108 (129)
                      +.++++|.|..|++.|.....|..|+++|+++++|.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            456677778888888877778888877777778888877764

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8.5e-13  Score=60.05  Aligned_cols=36  Identities=42%  Similarity=0.696  Sum_probs=24.9

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      .|+++++|.|..|++.|...+.|..|+++|++|+||
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSG   41 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCC
Confidence            356666777777777777777777777777777665

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=2.7e-12  Score=58.34  Aligned_cols=41  Identities=32%  Similarity=0.623  Sum_probs=24.8

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCG  107 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~  107 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|+.||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            45555666666666666666666666666666666666554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=5.4e-14  Score=71.07  Aligned_cols=65  Identities=25%  Similarity=0.362  Sum_probs=50.1

Q ss_pred             HHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         60 MKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        60 l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      |..|+..+.+++++.|..|+..| ....|..|+ .+.+++++.|..|++.|. ...|..|+++|+++.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            44555667788888888888887 477788888 778888888888888876 478888888887764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.2e-12  Score=66.13  Aligned_cols=67  Identities=16%  Similarity=0.299  Sum_probs=58.4

Q ss_pred             CCCCCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCC
Q psy13123          2 REIRPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLK   71 (129)
Q Consensus         2 ~~l~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~   71 (129)
                      .+|..|+.++.+++|+.|..|++.|. ...|..|+ .+.+++++.|+.|++.|. ...|..|+..++++.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            46888999999999999999999994 88899999 888999999999999866 578899988887753

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.3e-12  Score=57.40  Aligned_cols=39  Identities=36%  Similarity=0.597  Sum_probs=35.1

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccC
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKC   47 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c   47 (129)
                      ++|++++||.|..|++.|.....|..|++.|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            578889999999999999999999999999999998876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.28  E-value=2.6e-14  Score=69.70  Aligned_cols=49  Identities=12%  Similarity=0.259  Sum_probs=30.7

Q ss_pred             HHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHH
Q psy13123         63 HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKH  114 (129)
Q Consensus        63 ~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~  114 (129)
                      |++.|+++++|.|..|++.|.....|.   ..|+++++|.|..||+.|....
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECT
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCc
Confidence            344566666666666666666655554   5566667777777776665543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.27  E-value=1.3e-12  Score=56.89  Aligned_cols=36  Identities=28%  Similarity=0.526  Sum_probs=32.5

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhccc
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      |++.|+++++|.|..|++.|...+.|..|+++|++|
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            456788999999999999999999999999999876

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=4.3e-12  Score=55.48  Aligned_cols=33  Identities=21%  Similarity=0.253  Sum_probs=29.9

Q ss_pred             hcCCCcccCCc--cccccCCHHHHHHHHHHhcccC
Q psy13123         95 HLGVKKFACET--CGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        95 ~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +.+++||.|.+  |++.|...+.|..|+++|+++.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            57899999986  9999999999999999999873

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.24  E-value=1.5e-12  Score=61.58  Aligned_cols=40  Identities=18%  Similarity=0.341  Sum_probs=16.0

Q ss_pred             HHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCc
Q psy13123         61 KDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKK  100 (129)
Q Consensus        61 ~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~  100 (129)
                      ..|+..|+++++|.|..|++.|.....|..|+++|+++++
T Consensus        13 ~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A           13 EKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             hhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            3333334444444444444444444444444444443333

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=9.1e-12  Score=56.79  Aligned_cols=40  Identities=35%  Similarity=0.507  Sum_probs=19.1

Q ss_pred             hCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCcc
Q psy13123         67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETC  106 (129)
Q Consensus        67 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C  106 (129)
                      |+++++|.|..|++.|.....|..|++.|+++++|.|.+|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4444444444444444444444444444444444444443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.6e-11  Score=52.96  Aligned_cols=34  Identities=29%  Similarity=0.498  Sum_probs=30.7

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      .|.++++|.|..|++.|...+.|..|+++|++|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            3678899999999999999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.3e-11  Score=52.39  Aligned_cols=34  Identities=35%  Similarity=0.519  Sum_probs=30.7

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      .|.++++|.|.+|++.|...+.|..|+++|++|+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            3678899999999999999999999999999885

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.9e-11  Score=52.71  Aligned_cols=34  Identities=15%  Similarity=0.319  Sum_probs=30.6

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      .|+++++|.|.+|++.|...+.|..|+++|++|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            3678899999999999999999999999999875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=2.3e-11  Score=52.45  Aligned_cols=34  Identities=32%  Similarity=0.427  Sum_probs=30.5

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      .|.++++|.|.+|++.|...+.|..|+++|++|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            3678899999999999999999999999999875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=4.9e-11  Score=51.69  Aligned_cols=36  Identities=17%  Similarity=0.440  Sum_probs=31.9

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCCC
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSN   44 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~   44 (129)
                      ++|++++||.|..|++.|.....|..|++.|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            578899999999999999999999999999988764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.14  E-value=3.7e-11  Score=52.76  Aligned_cols=38  Identities=21%  Similarity=0.399  Sum_probs=31.0

Q ss_pred             CCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCC
Q psy13123         11 ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus        11 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      |++++||.|..|++.|.....|..|++.|+++++|.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            46778888888888888888888888888888887653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2e-11  Score=52.97  Aligned_cols=34  Identities=21%  Similarity=0.422  Sum_probs=30.5

Q ss_pred             HhcCCCcccCCccccccCCH-HHHHHHHHHhcccC
Q psy13123         94 AHLGVKKFACETCGKLFSSK-HGLKYHVRTHKGEC  127 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~-~~l~~h~~~h~~e~  127 (129)
                      +|+++++|.|..|++.|... +.|..|+++|++|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            46788999999999999999 99999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=3.8e-11  Score=51.74  Aligned_cols=33  Identities=42%  Similarity=0.695  Sum_probs=29.9

Q ss_pred             hcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        95 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +.++++|.|..|++.|...+.|..|+++|++|+
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            567899999999999999999999999999875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=99.13  E-value=1e-12  Score=55.43  Aligned_cols=31  Identities=29%  Similarity=0.420  Sum_probs=29.1

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +||.|.+|++.|...+.|..|+++|++|+||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5799999999999999999999999999986

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.13  E-value=6.4e-11  Score=51.30  Aligned_cols=37  Identities=24%  Similarity=0.398  Sum_probs=32.8

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCC
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      .|.+++++++||.|+.|++.|.....|..|++.|+++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            3778899999999999999999999999999988764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1e-11  Score=54.00  Aligned_cols=33  Identities=21%  Similarity=0.334  Sum_probs=30.1

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHH-HHHhccc
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYH-VRTHKGE  126 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h-~~~h~~e  126 (129)
                      .|++++||.|.+|++.|...+.|..| +++|+++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            57889999999999999999999999 8999876

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=99.13  E-value=2.4e-11  Score=55.93  Aligned_cols=34  Identities=35%  Similarity=0.714  Sum_probs=26.5

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHH-HhcccC
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVR-THKGEC  127 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~e~  127 (129)
                      +|+++++|.|.+|++.|...+.|..|++ +|++|.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            3677888888888888888888888888 888775

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=7e-11  Score=57.71  Aligned_cols=40  Identities=23%  Similarity=0.238  Sum_probs=30.3

Q ss_pred             CCCCCCccccCc--chhccCChhhHHHHH-HHhCCCCCccCCc
Q psy13123         10 LATTTSAYQCGE--CGKQFTRKFSLNAHL-HVHYGSSNYKCPL   49 (129)
Q Consensus        10 ~~~~~~~~~C~~--C~~~~~~~~~l~~h~-~~~~~~~~~~c~~   49 (129)
                      ..++++||.|..  |+++|...++|..|+ ++|++++|+.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            356778888854  888888888888886 5788888877754

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.09  E-value=9.2e-11  Score=50.13  Aligned_cols=35  Identities=26%  Similarity=0.410  Sum_probs=30.4

Q ss_pred             CCCCCCccccCcchhccCChhhHHHHHHHhCCCCC
Q psy13123         10 LATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSN   44 (129)
Q Consensus        10 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~   44 (129)
                      +|++++||.|..|++.|.....|..|++.|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47788999999999999999999999999987764

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8e-11  Score=54.01  Aligned_cols=39  Identities=41%  Similarity=0.704  Sum_probs=17.6

Q ss_pred             hCCCCCeecc--cccccccChhHHHHHHHHhcCCCcccCCc
Q psy13123         67 HGGLKPYVCT--YCGKAFVRASDLKRHIDAHLGVKKFACET  105 (129)
Q Consensus        67 ~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~  105 (129)
                      |+++++|.|.  .|++.|.....|..|++.|+++++|.|..
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3344444443  44444444444444444444444444443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.08  E-value=1.2e-10  Score=49.69  Aligned_cols=35  Identities=26%  Similarity=0.520  Sum_probs=29.4

Q ss_pred             CCCCCCccccCcchhccCChhhHHHHHHHhCCCCC
Q psy13123         10 LATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSN   44 (129)
Q Consensus        10 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~   44 (129)
                      +|+++++|.|..|++.|.....|..|++.|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            46788889999999999988899999888887764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=99.08  E-value=8.9e-11  Score=50.91  Aligned_cols=33  Identities=33%  Similarity=0.618  Sum_probs=29.6

Q ss_pred             hcCCCcccCC--ccccccCCHHHHHHHHHHhcccC
Q psy13123         95 HLGVKKFACE--TCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        95 ~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ++++++|.|.  .|++.|...+.|..|+++|++|+
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            5788999998  49999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=2.8e-10  Score=49.63  Aligned_cols=33  Identities=27%  Similarity=0.485  Sum_probs=29.1

Q ss_pred             CCCCCCccccCc--chhccCChhhHHHHHHHhCCC
Q psy13123         10 LATTTSAYQCGE--CGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        10 ~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      .+++++||.|.+  |+++|...+.|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            567889999986  999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=99.03  E-value=2e-10  Score=47.08  Aligned_cols=30  Identities=27%  Similarity=0.516  Sum_probs=27.2

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccCC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGECK  128 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p  128 (129)
                      ++|.|.+|++.|...+.|..|+++|++++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            478999999999999999999999998875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=2.7e-10  Score=55.77  Aligned_cols=33  Identities=24%  Similarity=0.463  Sum_probs=24.3

Q ss_pred             hcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        95 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +.+++||.|.+|++.|.+.+.|..|+++|+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            455677777777777777777777777777654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=99.02  E-value=2e-10  Score=47.08  Aligned_cols=30  Identities=30%  Similarity=0.667  Sum_probs=26.8

Q ss_pred             CCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         98 VKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +++|.|..|++.|...+.|..|+++|++|+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999998874

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=99.01  E-value=3.6e-10  Score=46.00  Aligned_cols=29  Identities=38%  Similarity=0.794  Sum_probs=26.1

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ++|.|..|++.|...+.|..|+++|++|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999874

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=99.00  E-value=2e-10  Score=46.85  Aligned_cols=29  Identities=34%  Similarity=0.604  Sum_probs=26.1

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ++|.|..|++.|...+.|..|+++|++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=6.9e-11  Score=61.34  Aligned_cols=46  Identities=20%  Similarity=0.382  Sum_probs=39.4

Q ss_pred             CCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchh
Q psy13123          7 RDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGK   52 (129)
Q Consensus         7 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~   52 (129)
                      +.++|++++||.|..|++.|.....|..|+++|++++||.|..+..
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~   61 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER   61 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh
Confidence            4567899999999999999999999999999999888998876653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=3.9e-11  Score=62.27  Aligned_cols=56  Identities=14%  Similarity=0.238  Sum_probs=34.9

Q ss_pred             HhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcc
Q psy13123         66 AHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        66 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      .|+++++|.|..|++.|.....|..|+++|+++++|.|..|.    ....|..|.++|++
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            356666777777777777777777777777777777765543    33334445555554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=5e-10  Score=48.03  Aligned_cols=35  Identities=29%  Similarity=0.540  Sum_probs=30.1

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      .+|++++||.|..|++.|.....|..|++.|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            46788899999999999999999999999888753

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.99  E-value=3.4e-10  Score=46.02  Aligned_cols=29  Identities=41%  Similarity=0.819  Sum_probs=26.0

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ++|.|..|++.|...+.|..|+++|++|+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47899999999999999999999999875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=4.7e-10  Score=48.16  Aligned_cols=35  Identities=20%  Similarity=0.405  Sum_probs=29.9

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      ++|++++||.|..|++.|.....|..|++.|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            46788899999999999999999999998887653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.6e-10  Score=48.84  Aligned_cols=35  Identities=23%  Similarity=0.447  Sum_probs=30.4

Q ss_pred             CCCCCCCccccCcchhccCCh-hhHHHHHHHhCCCC
Q psy13123          9 PLATTTSAYQCGECGKQFTRK-FSLNAHLHVHYGSS   43 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~-~~l~~h~~~~~~~~   43 (129)
                      ++|++++||.|..|++.|... ..|..|++.|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            468889999999999999998 99999999887653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.98  E-value=3.4e-10  Score=47.28  Aligned_cols=30  Identities=27%  Similarity=0.687  Sum_probs=27.1

Q ss_pred             CCcccCC--ccccccCCHHHHHHHHHHhcccC
Q psy13123         98 VKKFACE--TCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        98 ~~~~~C~--~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +++|.|.  .|++.|...+.|..|+++|++|+
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789998  89999999999999999999874

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=4e-10  Score=48.39  Aligned_cols=35  Identities=20%  Similarity=0.459  Sum_probs=29.8

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      +++++++||.|..|++.|.....|..|++.|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            46788899999999999999999999998887653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=9.2e-10  Score=47.16  Aligned_cols=35  Identities=26%  Similarity=0.492  Sum_probs=29.7

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      .+++++++|.|..|++.|.....|..|++.|++++
T Consensus         2 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            2 SSGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            35788889999999999999999999999888763

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.97  E-value=4.3e-10  Score=46.63  Aligned_cols=29  Identities=45%  Similarity=0.847  Sum_probs=26.3

Q ss_pred             CcccCC--ccccccCCHHHHHHHHHHhcccC
Q psy13123         99 KKFACE--TCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~--~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +||.|.  .||+.|...+.|..|+++|++|+
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            578997  89999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.96  E-value=1.7e-11  Score=56.20  Aligned_cols=37  Identities=24%  Similarity=0.484  Sum_probs=32.0

Q ss_pred             HHHHhcCCCcccCC--ccccccCCHHHHHHHHHHhcccC
Q psy13123         91 HIDAHLGVKKFACE--TCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        91 h~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +...|+++++|.|.  .|++.|...+.|..|+++|++|+
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            33458899999995  79999999999999999999885

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.95  E-value=3.7e-10  Score=45.89  Aligned_cols=29  Identities=31%  Similarity=0.606  Sum_probs=25.8

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ++|.|..|++.|...+.|..|+++|++|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            47899999999999999999999998874

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=5.7e-10  Score=48.26  Aligned_cols=34  Identities=21%  Similarity=0.384  Sum_probs=29.2

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHH-HHHhCCC
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAH-LHVHYGS   42 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h-~~~~~~~   42 (129)
                      ++|++++||.|..|++.|.....|..| ++.|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            568889999999999999999999999 8888764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.95  E-value=7.5e-10  Score=46.65  Aligned_cols=32  Identities=28%  Similarity=0.523  Sum_probs=25.4

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCCCCcc
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGSSNYK   46 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~   46 (129)
                      +||.|.+|++.|.....|..|+++|++++++.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46788888888888888888888888877764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.46  E-value=1.1e-10  Score=47.67  Aligned_cols=29  Identities=45%  Similarity=0.764  Sum_probs=26.1

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ++|.|..|++.|...+.|..|+++|++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47899999999999999999999999874

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=8.7e-10  Score=47.88  Aligned_cols=35  Identities=26%  Similarity=0.561  Sum_probs=29.6

Q ss_pred             CCCCCccccC--cchhccCChhhHHHHHHHhCCCCCc
Q psy13123         11 ATTTSAYQCG--ECGKQFTRKFSLNAHLHVHYGSSNY   45 (129)
Q Consensus        11 ~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~   45 (129)
                      |++++||.|.  .|++.|.....|..|++.|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4678889998  5999999999999999888888775

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.3e-09  Score=46.71  Aligned_cols=34  Identities=32%  Similarity=0.599  Sum_probs=29.0

Q ss_pred             CCCCCCccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123         10 LATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        10 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      ++++++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            5678889999999999999999999999887753

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.92  E-value=8.1e-10  Score=44.23  Aligned_cols=27  Identities=30%  Similarity=0.539  Sum_probs=24.0

Q ss_pred             CCcccCCccccccCCHHHHHHHHHHhc
Q psy13123         98 VKKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      +++|.|..||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999999875

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.91  E-value=7.7e-10  Score=44.22  Aligned_cols=27  Identities=33%  Similarity=0.692  Sum_probs=23.6

Q ss_pred             cccCCccccccCCHHHHHHHHHHhccc
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      +|.|..|++.|...+.|..|+++|++|
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            588999999999999999999999875

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.44  E-value=1.3e-10  Score=47.79  Aligned_cols=30  Identities=37%  Similarity=0.748  Sum_probs=26.7

Q ss_pred             CCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         98 VKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +++|.|..|++.|...+.|..|+++|++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            468999999999999999999999998874

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.91  E-value=7e-10  Score=44.77  Aligned_cols=28  Identities=43%  Similarity=0.956  Sum_probs=25.0

Q ss_pred             CCcccCCccccccCCHHHHHHHHHHhcc
Q psy13123         98 VKKFACETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      +++|.|..|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999998874

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.88  E-value=1.3e-09  Score=46.78  Aligned_cols=29  Identities=34%  Similarity=0.493  Sum_probs=20.3

Q ss_pred             cCCCcccCCccccccCCHHHHHHHHHHhc
Q psy13123         96 LGVKKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        96 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      .+++||.|.+||++|.+.++|..|+..+.
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~py~C   32 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQAYYC   32 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHHHHTS
T ss_pred             CCccCeECCCCCCccCCHhHccCcCCeEC
Confidence            46777777777777777777777764443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.88  E-value=5.9e-10  Score=44.72  Aligned_cols=27  Identities=22%  Similarity=0.466  Sum_probs=23.9

Q ss_pred             CCcccCCccccccCCHHHHHHHHHHhc
Q psy13123         98 VKKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      +++|.|..||+.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            478999999999999999999998875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.88  E-value=9.1e-10  Score=50.53  Aligned_cols=35  Identities=23%  Similarity=0.521  Sum_probs=27.1

Q ss_pred             CCCCCCccccCcchhccCChhhHHHHHH-HhCCCCC
Q psy13123         10 LATTTSAYQCGECGKQFTRKFSLNAHLH-VHYGSSN   44 (129)
Q Consensus        10 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~~~   44 (129)
                      +|++++||.|..|++.|.....|..|++ .|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4778889999999999998889999988 8876654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.87  E-value=8.4e-10  Score=45.23  Aligned_cols=29  Identities=31%  Similarity=0.677  Sum_probs=25.9

Q ss_pred             CcccCCccccccCCHHHHHHH-HHHhcccC
Q psy13123         99 KKFACETCGKLFSSKHGLKYH-VRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h-~~~h~~e~  127 (129)
                      ++|.|..|++.|...+.|..| +++|++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            478999999999999999999 78999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.86  E-value=6e-10  Score=50.89  Aligned_cols=41  Identities=17%  Similarity=0.468  Sum_probs=33.2

Q ss_pred             CCCCCCCCCCCCCccccC--cchhccCChhhHHHHHHHhCCCC
Q psy13123          3 EIRPRDPLATTTSAYQCG--ECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus         3 ~l~~~~~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      .+..+...|++++||.|.  .|++.|.....|..|++.|++++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            444556678899999995  79999999999999999988763

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.85  E-value=1.3e-09  Score=46.82  Aligned_cols=26  Identities=27%  Similarity=0.549  Sum_probs=22.3

Q ss_pred             CCCCCccccCcchhccCChhhHHHHH
Q psy13123         11 ATTTSAYQCGECGKQFTRKFSLNAHL   36 (129)
Q Consensus        11 ~~~~~~~~C~~C~~~~~~~~~l~~h~   36 (129)
                      ..+++||.|.+|+++|...++|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46788899999999998888888887

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=1.3e-08  Score=49.75  Aligned_cols=36  Identities=31%  Similarity=0.399  Sum_probs=31.0

Q ss_pred             CCCCCCCCccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123          8 DPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus         8 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      ...+++++||.|.+|++.|.....|..|+++|++..
T Consensus         5 ~~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            5 SSGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            345788899999999999999999999999998754

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.74  E-value=8e-09  Score=44.52  Aligned_cols=34  Identities=29%  Similarity=0.486  Sum_probs=28.2

Q ss_pred             CCCCCCccccC--cchhccCChhhHHHHHHHhCCCC
Q psy13123         10 LATTTSAYQCG--ECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        10 ~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      .+++++||.|.  .|++.|.....|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            46788899998  49999999999999998887753

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.18  E-value=1.4e-09  Score=43.11  Aligned_cols=26  Identities=42%  Similarity=0.885  Sum_probs=22.9

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhc
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      ++|.|..||+.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47899999999999999999998874

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.68  E-value=1.3e-08  Score=41.39  Aligned_cols=29  Identities=34%  Similarity=0.643  Sum_probs=23.6

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCCC
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      ++||.|..|++.|.....|..|++.|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46788888888888888888888888765

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.66  E-value=2.3e-08  Score=40.32  Aligned_cols=28  Identities=25%  Similarity=0.600  Sum_probs=22.8

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      +||.|..|++.|.....|..|++.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4688888888888888888888888765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.64  E-value=1.4e-08  Score=41.00  Aligned_cols=28  Identities=32%  Similarity=0.631  Sum_probs=23.6

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      +||.|..|++.|.....|..|++.|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4788999999998888888888888765

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.63  E-value=1.7e-08  Score=40.71  Aligned_cols=27  Identities=30%  Similarity=0.813  Sum_probs=23.6

Q ss_pred             CcccCC--ccccccCCHHHHHHHHHHhcc
Q psy13123         99 KKFACE--TCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        99 ~~~~C~--~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      ++|.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468898  999999999999999999874

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.61  E-value=3.3e-08  Score=40.11  Aligned_cols=29  Identities=21%  Similarity=0.432  Sum_probs=23.3

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      +||.|..|++.|.....|..|++.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            36788888888888888888888887664

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.61  E-value=6.7e-10  Score=46.46  Aligned_cols=31  Identities=26%  Similarity=0.529  Sum_probs=22.2

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCCCCc
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGSSNY   45 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~   45 (129)
                      +||.|.+|++.|.....|..|+++|++++|+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3677777777777777777777777776664

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.61  E-value=2.2e-08  Score=40.33  Aligned_cols=29  Identities=45%  Similarity=0.854  Sum_probs=23.2

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      +||.|..|++.|.....|..|++.|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            46888888888888888888888887653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.61  E-value=3.3e-08  Score=40.93  Aligned_cols=30  Identities=30%  Similarity=0.614  Sum_probs=24.5

Q ss_pred             CCccccC--cchhccCChhhHHHHHHHhCCCC
Q psy13123         14 TSAYQCG--ECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        14 ~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4678888  79998888888888888887653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.60  E-value=2.8e-08  Score=40.00  Aligned_cols=28  Identities=32%  Similarity=0.669  Sum_probs=22.8

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      +||.|..|++.|.....|..|++.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4688888888888888888888888765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.60  E-value=2.7e-08  Score=39.53  Aligned_cols=27  Identities=19%  Similarity=0.431  Sum_probs=21.8

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhC
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      ++||.|..|++.|.....|..|++.|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            467888888888888888888887763

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.57  E-value=2.4e-08  Score=39.99  Aligned_cols=28  Identities=39%  Similarity=0.891  Sum_probs=22.7

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCC
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYG   41 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~   41 (129)
                      ++||.|..|++.|.....|..|++.|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4678888888888888888888887753

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.57  E-value=2.1e-08  Score=39.97  Aligned_cols=27  Identities=26%  Similarity=0.501  Sum_probs=22.2

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhC
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      ++||.|..|++.|.....|..|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            467889999999998888888887663

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.55  E-value=4.4e-08  Score=40.25  Aligned_cols=29  Identities=38%  Similarity=0.739  Sum_probs=23.3

Q ss_pred             CccccC--cchhccCChhhHHHHHHHhCCCC
Q psy13123         15 SAYQCG--ECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        15 ~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            468887  88888888888888888887653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.94  E-value=1e-08  Score=41.55  Aligned_cols=28  Identities=46%  Similarity=0.730  Sum_probs=22.1

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      +||.|..|++.|.....|..|++.|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4678888888888888888888877664

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.94  E-value=1e-08  Score=41.80  Aligned_cols=29  Identities=31%  Similarity=0.673  Sum_probs=22.8

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCCC
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      ++||.|..|++.|.....|..|++.|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            35788888888888888888888877654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.47  E-value=6.4e-08  Score=38.28  Aligned_cols=26  Identities=38%  Similarity=0.814  Sum_probs=20.6

Q ss_pred             ccccCcchhccCChhhHHHHHHHhCC
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHYG   41 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~~   41 (129)
                      ||.|..|++.|.....|..|++.|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            57788888888888888888887765

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.45  E-value=7e-08  Score=39.17  Aligned_cols=28  Identities=43%  Similarity=0.838  Sum_probs=22.4

Q ss_pred             CccccCcchhccCChhhHHHH-HHHhCCC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAH-LHVHYGS   42 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h-~~~~~~~   42 (129)
                      +||.|..|++.|.....|..| ++.|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            468888888888888888888 5777765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.76  E-value=3.7e-08  Score=38.75  Aligned_cols=25  Identities=36%  Similarity=0.845  Sum_probs=20.0

Q ss_pred             CccccCcchhccCChhhHHHHHHHh
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVH   39 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~   39 (129)
                      +||.|..||+.|.....|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4688888888888888888887766

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.26  E-value=4.3e-07  Score=36.31  Aligned_cols=27  Identities=37%  Similarity=0.855  Sum_probs=22.3

Q ss_pred             CccccC--cchhccCChhhHHHHHHHhCC
Q psy13123         15 SAYQCG--ECGKQFTRKFSLNAHLHVHYG   41 (129)
Q Consensus        15 ~~~~C~--~C~~~~~~~~~l~~h~~~~~~   41 (129)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468888  899999988889988888753

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.82  E-value=7.4e-05  Score=36.04  Aligned_cols=46  Identities=24%  Similarity=0.481  Sum_probs=29.9

Q ss_pred             ccccccChhHHHHHHH-HhcCCC------cccCC--ccccccCCHHHHHHHHHHh
Q psy13123         78 CGKAFVRASDLKRHID-AHLGVK------KFACE--TCGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus        78 c~~~~~~~~~l~~h~~-~~~~~~------~~~C~--~C~~~f~~~~~l~~h~~~h  123 (129)
                      |++.|.+...|..|+. .|.+.+      .|.|.  .|++.+.....|..|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            6666666666666653 454433      57775  5777777777777777764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.69  E-value=9e-06  Score=44.28  Aligned_cols=28  Identities=29%  Similarity=0.509  Sum_probs=22.5

Q ss_pred             hcCCCcccCCccccccCCHHHHHHHHHH
Q psy13123         95 HLGVKKFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus        95 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      ++|+++|.|..|++.|.+.+.|..|+++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            5677888888888888888888888765

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.63  E-value=0.00012  Score=35.30  Aligned_cols=23  Identities=30%  Similarity=0.479  Sum_probs=12.5

Q ss_pred             CcchhccCChhhHHHHHH-HhCCC
Q psy13123         20 GECGKQFTRKFSLNAHLH-VHYGS   42 (129)
Q Consensus        20 ~~C~~~~~~~~~l~~h~~-~~~~~   42 (129)
                      ..|++.|.+...|..|+. .|.+.
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~   30 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQ   30 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCC
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCc
Confidence            445666666666666653 45443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.34  E-value=0.00041  Score=40.05  Aligned_cols=77  Identities=19%  Similarity=0.345  Sum_probs=52.3

Q ss_pred             cchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHhcccCC
Q psy13123         49 LCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGECK  128 (129)
Q Consensus        49 ~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p  128 (129)
                      .|+..+. ...+..|. ..-..++..|+.|+..+ ....+..|....=..+...|..|+..+ ....+..|..++.|+.+
T Consensus        89 GC~~~~~-~~~l~~H~-~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~-~~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQ-AHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM-AFEDKEIHDQNCPLALE  164 (170)
T ss_dssp             TCCCEEE-GGGHHHHH-TTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE-EGGGHHHHHTTCCC---
T ss_pred             CCCceec-HhHHHHHH-hcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc-CHHHHHhHHHhCcChhh
Confidence            3444333 34466665 34445677899998776 556788898766667888899998887 45678999999999876


Q ss_pred             C
Q psy13123        129 R  129 (129)
Q Consensus       129 ~  129 (129)
                      |
T Consensus       165 ~  165 (170)
T 3hcs_A          165 H  165 (170)
T ss_dssp             -
T ss_pred             h
Confidence            5

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.30  E-value=3.5e-05  Score=41.97  Aligned_cols=31  Identities=23%  Similarity=0.447  Sum_probs=22.9

Q ss_pred             CCCCCCCCccccCcchhccCChhhHHHHHHH
Q psy13123          8 DPLATTTSAYQCGECGKQFTRKFSLNAHLHV   38 (129)
Q Consensus         8 ~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~   38 (129)
                      -..++|+++|.|..|++.|.....|..|+++
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            4456777788888888888888877777653

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.16  E-value=0.00054  Score=30.41  Aligned_cols=29  Identities=21%  Similarity=0.325  Sum_probs=19.9

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      -.|.|+.|+..|.....|+.|++--.+|.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~   39 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEM   39 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcch
Confidence            45677777777777777777777655554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.48  E-value=0.0056  Score=33.62  Aligned_cols=76  Identities=22%  Similarity=0.302  Sum_probs=47.3

Q ss_pred             CCCccCCcchhhhcchhHHHHHHH--HhCCC-CCeeccc------ccccccChhHHHHHHHHhcCCCcccCCccccccCC
Q psy13123         42 SSNYKCPLCGKFFIQLCHMKDHIQ--AHGGL-KPYVCTY------CGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSS  112 (129)
Q Consensus        42 ~~~~~c~~c~~~~~~~~~l~~~~~--~~~~~-~~~~c~~------c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~  112 (129)
                      .+++.|..|...|.+...+..|..  .|... +.+.+..      -+..+....    +.....+...|.|..|++.|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            367899999999999988888873  23211 1111100      011111100    1112345677899999999999


Q ss_pred             HHHHHHHHH
Q psy13123        113 KHGLKYHVR  121 (129)
Q Consensus       113 ~~~l~~h~~  121 (129)
                      ...+..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999965

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.00  E-value=0.01  Score=32.60  Aligned_cols=75  Identities=20%  Similarity=0.261  Sum_probs=46.9

Q ss_pred             CccccCcchhccCChhhHHHHH--HHhCCC-CCccC------CcchhhhcchhHHHHHHHHhCCCCCeecccccccccCh
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHL--HVHYGS-SNYKC------PLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRA   85 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~--~~~~~~-~~~~c------~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~   85 (129)
                      +++.|..|...|.+...+..|.  ..|... +.+.+      +.-+..+....    +.....+...|.|..|...|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            4688999999999999999998  344211 11111      00011111110    11124456678999999999999


Q ss_pred             hHHHHHHH
Q psy13123         86 SDLKRHID   93 (129)
Q Consensus        86 ~~l~~h~~   93 (129)
                      ..+..|..
T Consensus       107 ~~~~~H~~  114 (127)
T 1zu1_A          107 VVAESHYI  114 (127)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            99988865

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.75  E-value=0.022  Score=25.32  Aligned_cols=24  Identities=25%  Similarity=0.468  Sum_probs=15.3

Q ss_pred             CccccCcchhccCChhhHHHHHHH
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHV   38 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~   38 (129)
                      ..+.|+.|+..|.....|..||..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            456666666666666666666653

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.81  E-value=0.028  Score=23.24  Aligned_cols=25  Identities=20%  Similarity=0.341  Sum_probs=21.4

Q ss_pred             ccccCcchhccCChhhHHHHHHHhC
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      .|.|+.|.+.+.+...|..|....+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            4999999999999999999987543

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=94.04  E-value=0.026  Score=28.65  Aligned_cols=20  Identities=45%  Similarity=0.886  Sum_probs=8.8

Q ss_pred             cCCccccccCCHHHHHHHHHHhc
Q psy13123        102 ACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus       102 ~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      .|.+||+.|.   .|.+|+++++
T Consensus        23 iClecGK~fK---~LkRHL~~~h   42 (87)
T 2jsp_A           23 VCLECGGSFK---SLKRHLTTHH   42 (87)
T ss_dssp             ECTBTCCEES---BHHHHHHHTT
T ss_pred             EecccchhhH---HHHHHHHHcc
Confidence            3444444444   2334444433

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=94.01  E-value=0.086  Score=21.94  Aligned_cols=29  Identities=21%  Similarity=0.151  Sum_probs=19.7

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ..+.|..|+-.|.+..++..|.+......
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~YC~s~   35 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQFYCKNK   35 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHHTSCCC
T ss_pred             CcCeeccccceehhhHHHhhhheecCCCC
Confidence            45667777777777777777776654433

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.61  E-value=0.051  Score=31.20  Aligned_cols=81  Identities=20%  Similarity=0.307  Sum_probs=54.5

Q ss_pred             ccc--CcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccccChhHHHHHHHH
Q psy13123         17 YQC--GECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDA   94 (129)
Q Consensus        17 ~~C--~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~   94 (129)
                      ..|  ..|+..+. ...+..|...- .-.+..|+.|+..+ ....|..|.......+...|+.|+..+.. ..+..|...
T Consensus        83 v~C~n~GC~~~~~-~~~l~~H~~~C-~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~  158 (170)
T 3hcs_A           83 VKCPNEGCLHKME-LRHLEDHQAHC-EFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQN  158 (170)
T ss_dssp             EECCSTTCCCEEE-GGGHHHHHTTC-TTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTT
T ss_pred             cCCCCCCCCceec-HhHHHHHHhcC-CceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHh
Confidence            345  34665543 45566776321 34567889998876 56679999888888888999999887644 567888887


Q ss_pred             hcCCCcc
Q psy13123         95 HLGVKKF  101 (129)
Q Consensus        95 ~~~~~~~  101 (129)
                      ..|+.++
T Consensus       159 ~~~~~~~  165 (170)
T 3hcs_A          159 CPLALEH  165 (170)
T ss_dssp             CCC----
T ss_pred             CcChhhh
Confidence            7776543

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.15  E-value=0.054  Score=26.91  Aligned_cols=40  Identities=23%  Similarity=0.566  Sum_probs=22.9

Q ss_pred             ccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcc
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQ   56 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~   56 (129)
                      .|.|..||.+++. ..+..|...-.+...+.|..|+..|..
T Consensus        10 ~F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A           10 FFTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             EEEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             EEEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC
Confidence            4667777766533 345555544444445666666666654

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=90.46  E-value=0.14  Score=25.03  Aligned_cols=58  Identities=21%  Similarity=0.362  Sum_probs=30.2

Q ss_pred             CCCCCCCCCCCCCcccc-CcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHH
Q psy13123          3 EIRPRDPLATTTSAYQC-GECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDH   63 (129)
Q Consensus         3 ~l~~~~~~~~~~~~~~C-~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~   63 (129)
                      +|..|+ ..-...+..| ..|+..+. +..|..|+...=..+...|..|+..+... .|..|
T Consensus         4 ~l~~H~-~~C~~~~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~~~-~l~~H   62 (76)
T 2yuc_A            4 GSSGHL-NTCSFNVIPCPNRCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFSGE-AYESH   62 (76)
T ss_dssp             SCSCCC-CCCCCSCCBCTTCCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCCHH-HHHHT
T ss_pred             HHHHHH-HHCCCcccCCCccccHHhh-HhHHHhhCHhhCCCcceECCCCCCccCHH-HHHHH
Confidence            455666 3334445667 46776653 34455555433344556677776655432 24444

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=90.11  E-value=0.12  Score=27.16  Aligned_cols=28  Identities=25%  Similarity=0.469  Sum_probs=16.6

Q ss_pred             CCccCCcchhhhcchhHHHHHHHHhCCCCCeeccccccc
Q psy13123         43 SNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKA   81 (129)
Q Consensus        43 ~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~   81 (129)
                      .|+.|..||..|.           ..-.+|-.|+.|+..
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe   93 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSE   93 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCC
Confidence            4677777777761           112345677777643

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=89.40  E-value=0.33  Score=28.90  Aligned_cols=26  Identities=27%  Similarity=0.564  Sum_probs=23.0

Q ss_pred             CCcccCCccccccCC-HHHHHHHHHHh
Q psy13123         98 VKKFACETCGKLFSS-KHGLKYHVRTH  123 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~-~~~l~~h~~~h  123 (129)
                      ..+..|.+|+..|.. ...|..|+..|
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e  193 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEE  193 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHH
Confidence            568899999999986 99999999876

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=88.80  E-value=0.29  Score=22.35  Aligned_cols=20  Identities=25%  Similarity=0.810  Sum_probs=16.5

Q ss_pred             cccCcchhccCChhhHHHHH
Q psy13123         17 YQCGECGKQFTRKFSLNAHL   36 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~   36 (129)
                      -.|..|+..|..+..++.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            57888888888888888876

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=87.67  E-value=0.25  Score=29.37  Aligned_cols=25  Identities=24%  Similarity=0.437  Sum_probs=18.9

Q ss_pred             CCeecccccccccChhHHHHHHHHhcCCCcccCCcccc
Q psy13123         71 KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGK  108 (129)
Q Consensus        71 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~  108 (129)
                      ..|+|..||.++..             +.|..|+.||-
T Consensus       170 ~~~~C~~CG~i~~g-------------~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHKG-------------EDFEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEES-------------SCCSBCTTTCC
T ss_pred             cEEEECCCCCEEcC-------------cCCCCCCCCCC
Confidence            36899999987652             45688999974

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=87.28  E-value=0.27  Score=28.39  Aligned_cols=25  Identities=36%  Similarity=0.809  Sum_probs=18.3

Q ss_pred             CCeecccccccccChhHHHHHHHHhcCCCcccCCcccc
Q psy13123         71 KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGK  108 (129)
Q Consensus        71 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~  108 (129)
                      ..|+|+.||.+..             ++.|-.|+.||-
T Consensus       137 ~~~~C~~CG~i~~-------------~~~p~~CP~Cg~  161 (170)
T 3pwf_A          137 KVYICPICGYTAV-------------DEAPEYCPVCGA  161 (170)
T ss_dssp             CEEECTTTCCEEE-------------SCCCSBCTTTCC
T ss_pred             CeeEeCCCCCeeC-------------CCCCCCCCCCCC
Confidence            4588999998775             145668999873

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.95  E-value=0.2  Score=24.78  Aligned_cols=25  Identities=24%  Similarity=0.517  Sum_probs=16.6

Q ss_pred             cccCCccccccC-------CHHHHHHHHHHhc
Q psy13123        100 KFACETCGKLFS-------SKHGLKYHVRTHK  124 (129)
Q Consensus       100 ~~~C~~C~~~f~-------~~~~l~~h~~~h~  124 (129)
                      .-.|..|++.+.       .-++|.+|++..+
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H   59 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMH   59 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTT
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHC
Confidence            456777777765       2457888887654

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=84.47  E-value=0.56  Score=19.94  Aligned_cols=24  Identities=21%  Similarity=0.636  Sum_probs=14.4

Q ss_pred             CccccCcchhccCChhhHHHHHHHh
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVH   39 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~   39 (129)
                      ..+.|+.|+..+.. .....|.-.|
T Consensus         8 ~~~~C~~C~~~i~~-~~~~EH~D~H   31 (39)
T 2i5o_A            8 DQVPCEKCGSLVPV-WDMPEHMDYH   31 (39)
T ss_dssp             CEEECTTTCCEEEG-GGHHHHHHHH
T ss_pred             CCcccccccCcCCc-ccccchhhHH
Confidence            35678888877665 3345555444

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=84.46  E-value=0.71  Score=18.06  Aligned_cols=21  Identities=24%  Similarity=0.452  Sum_probs=16.3

Q ss_pred             cccCcchhccCChhhHHHHHH
Q psy13123         17 YQCGECGKQFTRKFSLNAHLH   37 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~   37 (129)
                      |.|+.|.....+...+..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            678888888888877777754

>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A

Probab=83.66  E-value=0.28  Score=28.84  Aligned_cols=25  Identities=20%  Similarity=0.533  Sum_probs=18.6

Q ss_pred             CeecccccccccChhHHHHHHHHhcCCCcccCCcccc
Q psy13123         72 PYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGK  108 (129)
Q Consensus        72 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~  108 (129)
                      .|+|..||.++...            +.|-.|+.||-
T Consensus       155 ~~~C~~CG~~~~g~------------~~p~~CP~C~~  179 (191)
T 1lko_A          155 KWRCRNCGYVHEGT------------GAPELCPACAH  179 (191)
T ss_dssp             EEEETTTCCEEEEE------------ECCSBCTTTCC
T ss_pred             eEEECCCCCEeeCC------------CCCCCCCCCcC
Confidence            58999999887521            35558999975

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=82.13  E-value=0.95  Score=26.95  Aligned_cols=26  Identities=35%  Similarity=0.650  Sum_probs=19.0

Q ss_pred             CCccccCcchhccCC-hhhHHHHHHHh
Q psy13123         14 TSAYQCGECGKQFTR-KFSLNAHLHVH   39 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~-~~~l~~h~~~~   39 (129)
                      ..|.+|..|+..|.+ -..|..|+..+
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e  193 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEE  193 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHH
Confidence            346788888888876 67777777655

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=80.96  E-value=0.56  Score=20.75  Aligned_cols=12  Identities=42%  Similarity=1.101  Sum_probs=8.1

Q ss_pred             Ceeccccccccc
Q psy13123         72 PYVCTYCGKAFV   83 (129)
Q Consensus        72 ~~~c~~c~~~~~   83 (129)
                      .|+|..||.++.
T Consensus         4 ~y~C~vCGyvyd   15 (46)
T 6rxn_A            4 KYVCNVCGYEYD   15 (46)
T ss_dssp             CEEETTTCCEEC
T ss_pred             EEECCCCCeEEe
Confidence            467777776664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	129
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	9e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	8e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.002
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.003
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	6e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.002
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.001
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.004
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.001
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.001
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.001
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.001
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.003
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.003

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 3e-08
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 71  KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
           K Y C  CGK+F   S   RH+  HLG++ + C  CGK F  KH L  H++ H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-06
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAH 67
          Y C +CGK FT K   + H+ +H G   Y C +CGK F    H+  H++ H
Sbjct: 4  YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 1e-05
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 45 YKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAH 95
          Y C  CGK F        H+  H GL+PY C  CGK F     L  H+  H
Sbjct: 4  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 4e-06
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 71  KPYVCTYCGKAFVRASDLKRHI-DAHLGVKKFACE 104
           KPY+C  CGK F R   L  HI   H   +   C+
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 9e-05
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 45 YKCPLCGKFFIQLCHMKDHIQA-HGGLKPYVC 75
          Y C  CGK F +  H+  HI+  H   +P+ C
Sbjct: 6  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 4e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 17 YQCGECGKQFTRKFSLNAHL-HVHYGSSNYKCPL 49
          Y C  CGK F+R   LN H+  VH     +KC +
Sbjct: 6  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 8e-06
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 95  HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           H G K + C  CGK FS    L  H R H GE
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (88), Expect = 1e-05
 Identities = 17/31 (54%), Positives = 19/31 (61%)

Query: 67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLG 97
          H G KPY C  CGKAF R+S L +H   H G
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 7e-04
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYG 41
          Y C ECGK F+R   L  H  VH G
Sbjct: 8  YGCVECGKAFSRSSILVQHQRVHTG 32

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.8 bits (86), Expect = 2e-05
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHLGVK 99
          + +VC  C +AF R   LKRH  +H   K
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.5 bits (80), Expect = 2e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 99  KKFACETCGKLFSSKHGLKYHVRTHKGE 126
           + F CE C + F+ +  LK H R+H  E
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNE 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 31.8 bits (73), Expect = 0.002
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYG 41
          + C  C + F R+  L  H   H  
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTN 27

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 3e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 67 HGGLKPYVCTYCGKAFVRASDLKRHIDAH 95
          H G KPY C  C   F ++  +K HI   
Sbjct: 3  HSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.001
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 95  HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           H G K + C  C   F+    +K H+     E
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.6 bits (85), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 63 HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGV 98
            +   G+KP+ C  C ++F R+  L  H   H+ V
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.2 bits (71), Expect = 0.003
 Identities = 10/33 (30%), Positives = 13/33 (39%)

Query: 91  HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
                 G+K F C  C + FS    L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 67 HGGLKPYVCTYCGKAFVRASDLKRHIDAH 95
          H G KPY C++C K F +   L  H   +
Sbjct: 3  HTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 1e-04
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 95  HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           H G K +AC  C K F  K  L  H + +   
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.9 bits (81), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHLG 97
          KP+ C  C + F R+  L  HI  H G
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.0 bits (76), Expect = 6e-04
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 17 YQCGECGKQFTRKFSLNAHLHVHYG 41
          +QC  C + F+R   L  H+  H G
Sbjct: 4  FQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.8 bits (73), Expect = 0.002
 Identities = 12/27 (44%), Positives = 14/27 (51%)

Query: 99  KKFACETCGKLFSSKHGLKYHVRTHKG 125
           K F C  C + FS    L  H+RTH G
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 2e-04
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 90  RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
           R        +++ C+ CGK FS    L  H RTH GE
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.1 bits (73), Expect = 0.002
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 63 HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLG 97
                  + Y C  CGK+F  +SDL +H   H G
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 2e-04
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 44 NYKC--PLCGKFFIQLCHMKDHIQAHGGLKPYVCTY 77
          ++ C  P CGK F    H+K+H++ H   + Y+C +
Sbjct: 1  SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (74), Expect = 0.001
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 73  YVCTY--CGKAFVRASDLKRHIDAHLGVKKFACE 104
           + C    CGK+F     LK H+  H   + + CE
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.2 bits (71), Expect = 0.004
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 16 AYQCGE--CGKQFTRKFSLNAHLHVHYGSSNYKC 47
          ++ C E  CGK F  K  L  H+ +H  + +Y C
Sbjct: 1  SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 3e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHLGVK 99
          K + C  C K F+R+  L +HI  H   K
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 4e-04
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 99  KKFACETCGKLFSSKHGLKYHVRTHKGE 126
           KKFAC  C K F     L  H++TH+ +
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNK 28

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 5e-04
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)

Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAHLGVK 99
          +P++CT+  CGK F R+ +L+RH   H G K
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.7 bits (75), Expect = 9e-04
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAH 95
          +PY C +  C KAFVR  DL RH  +H
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.4 bits (74), Expect = 0.001
 Identities = 8/32 (25%), Positives = 13/32 (40%)

Query: 95  HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
             G + F C  C   F++K     H++ H   
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.6 bits (72), Expect = 0.002
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 67 HGGLKPYVCTYCGKAFVRASDLKRHIDAH 95
            G +P+VC  C  AF   ++  RH+  H
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.001
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)

Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAH 95
          +PYVC +  C K F ++++LK HI  H
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.3 bits (74), Expect = 0.001
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAHLG 97
          +PY C    C + F R++DL RHI  H G
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.001
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)

Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAHLG 97
          KP+ CT+  C K++ R  +LK H+ +H G
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.7 bits (72), Expect = 0.002
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHL 96
          KP+ C  CG+ F R+ + KRH   HL
Sbjct: 2  KPFACDICGRKFARSDERKRHTKIHL 27

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.4 bits (72), Expect = 0.003
 Identities = 12/21 (57%), Positives = 13/21 (61%)

Query: 71 KPYVCTYCGKAFVRASDLKRH 91
          KPY C  CGKAF + S L  H
Sbjct: 1  KPYKCLECGKAFSQNSGLINH 21

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.2 bits (71), Expect = 0.003
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAHLG 97
          KP+ CT+  CGK F    +L+ H+  H G
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	129
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.8
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.74
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.68
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.67
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.59
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.58
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.58
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.57
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.56
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.55
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.54
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.52
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.5
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.5
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.47
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.46
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.45
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.43
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.4
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.39
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.38
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.35
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.35
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.34
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.33
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.29
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.28
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.24
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.18
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.17
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.16
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.14
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.11
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.04
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.02
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.0
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.95
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.93
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.83
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.83
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.82
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.77
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.73
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.68
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.63
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.58
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.55
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.52
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.49
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.47
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.43
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.34
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.29
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.29
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.24
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.23
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.19
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.18
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.18
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.16
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.16
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.14
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.11
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.06
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.98
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.93
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.91
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.9
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.89
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.8
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.74
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.71
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.71
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.66
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.63
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.58
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.39
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.34
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.32
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.29
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.22
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.22
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.22
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.21
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.12
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.07
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.01
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.97
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.84
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.81
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.7
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.59
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.36
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	96.32
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.19
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.19
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	96.14
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.13
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.11
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.93
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.91
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.89
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.7
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.33
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.29
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	95.29
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.56
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	93.55
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	92.87
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.75
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.05
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	90.87
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	90.77
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	90.24
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	88.0
d1fu9a_	36	U-shaped transcription factor, different fingers {	87.34
d2gmga1	105	Hypothetical protein PF0610 {Pyrococcus furiosus [	86.91
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	85.3
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	84.13
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	82.34
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	81.44

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.1e-20  Score=87.31  Aligned_cols=53  Identities=43%  Similarity=0.881  Sum_probs=50.1

Q ss_pred             CCCeecccccccccChhHHHHHHHHhcCCCcccCCccccccCCHHHHHHHHHHh
Q psy13123         70 LKPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus        70 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h  123 (129)
                      |++|.| .||+.|.....|..|+++|++++||.|.+||++|.+.+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            579999 59999999999999999999999999999999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=5.8e-19  Score=82.32  Aligned_cols=53  Identities=38%  Similarity=0.819  Sum_probs=41.5

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhhhcchhHHHHHHHHh
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAH   67 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~~~~~~   67 (129)
                      |+||.| +||++|.....|..|+++|++++||.|..|++.|.....|..|++.|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            567888 48888888888888888888888888888888888888888777654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.4e-17  Score=68.83  Aligned_cols=33  Identities=45%  Similarity=0.769  Sum_probs=31.5

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhccc
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      +|++++||.|.+||++|.+.++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            489999999999999999999999999999997

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.3e-18  Score=73.61  Aligned_cols=36  Identities=36%  Similarity=0.647  Sum_probs=34.1

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhccc
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      |+.+|++++||.|.+||++|.+.++|..|+++||||
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            567899999999999999999999999999999998

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=4.2e-16  Score=66.80  Aligned_cols=33  Identities=33%  Similarity=0.604  Sum_probs=26.3

Q ss_pred             CCCcccCCccccccCCHHHHHHHHH-HhcccCCC
Q psy13123         97 GVKKFACETCGKLFSSKHGLKYHVR-THKGECKR  129 (129)
Q Consensus        97 ~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~e~p~  129 (129)
                      .+|||.|.+||+.|...++|..|++ +|++|+||
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy   35 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH   35 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCC
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCc
Confidence            3678888888888888888888865 68888887

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=8.2e-16  Score=65.98  Aligned_cols=38  Identities=29%  Similarity=0.573  Sum_probs=35.8

Q ss_pred             CCCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCC
Q psy13123          5 RPRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus         5 ~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      ++|+.+|++++||.|.+||++|...++|..|+++|+||
T Consensus         1 ~rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           1 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            47899999999999999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.58  E-value=7.3e-16  Score=61.91  Aligned_cols=29  Identities=38%  Similarity=0.794  Sum_probs=27.7

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +||.|.+|+++|.+.++|.+|+++||||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999996

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=6.2e-16  Score=65.49  Aligned_cols=35  Identities=31%  Similarity=0.580  Sum_probs=31.8

Q ss_pred             HHhcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         93 DAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        93 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      ++|+||+||+|.+||++|.+.++|..|+++|++|.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            36899999999999999999999999999998763

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.2e-15  Score=61.17  Aligned_cols=29  Identities=41%  Similarity=0.744  Sum_probs=27.7

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +||.|.+||+.|.+.++|..|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999996

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.55  E-value=1.6e-15  Score=60.19  Aligned_cols=28  Identities=43%  Similarity=0.788  Sum_probs=26.7

Q ss_pred             CCcccCCccccccCCHHHHHHHHHHhcc
Q psy13123         98 VKKFACETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      ||||.|.+|+++|.+.++|..|+++|||
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999987

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=1.7e-15  Score=63.34  Aligned_cols=33  Identities=24%  Similarity=0.539  Sum_probs=30.3

Q ss_pred             hcCCCcccCCccccccCCHHHHHHHHHHhcccC
Q psy13123         95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        95 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      |+|++||+|.+|++.|.+.++|..|+++|+.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            689999999999999999999999999998763

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.52  E-value=1.2e-15  Score=65.00  Aligned_cols=35  Identities=29%  Similarity=0.559  Sum_probs=31.8

Q ss_pred             HHHHhcCCCcccCCccccccCCHHHHHHHHHHhcc
Q psy13123         91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        91 h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      |.+.|++|+||.|.+|+++|.+.++|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            45679999999999999999999999999999974

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=6.8e-15  Score=62.99  Aligned_cols=38  Identities=37%  Similarity=0.740  Sum_probs=32.7

Q ss_pred             CCCCccccCcchhccCChhhHHHHHH-HhCCCCCccCCc
Q psy13123         12 TTTSAYQCGECGKQFTRKFSLNAHLH-VHYGSSNYKCPL   49 (129)
Q Consensus        12 ~~~~~~~C~~C~~~~~~~~~l~~h~~-~~~~~~~~~c~~   49 (129)
                      +.++||.|.+||+.|...++|..|++ +|++++||.|.+
T Consensus         1 s~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            35789999999999999999999976 699999999863

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=6.9e-15  Score=60.63  Aligned_cols=33  Identities=39%  Similarity=0.727  Sum_probs=29.7

Q ss_pred             CCCCCCccccCcchhccCChhhHHHHHHHhCCC
Q psy13123         10 LATTTSAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        10 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      +|++++||.|.+||++|...+.|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            588999999999999999999999999999875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.3e-14  Score=56.16  Aligned_cols=26  Identities=46%  Similarity=0.869  Sum_probs=24.8

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhc
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      |||+|.+|||+|.+.+.|..|+|+||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999996

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.6e-14  Score=60.40  Aligned_cols=35  Identities=26%  Similarity=0.470  Sum_probs=31.3

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      ++|+|++||.|.+||++|...+.|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            58999999999999999999999999999997653

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=3.2e-14  Score=60.50  Aligned_cols=35  Identities=26%  Similarity=0.445  Sum_probs=32.2

Q ss_pred             CCCCCCCCCccccCcchhccCChhhHHHHHHHhCC
Q psy13123          7 RDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYG   41 (129)
Q Consensus         7 ~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~   41 (129)
                      |.++|++++||.|.+|+++|...++|..|++.|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67999999999999999999999999999998864

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2.7e-14  Score=60.22  Aligned_cols=33  Identities=27%  Similarity=0.559  Sum_probs=28.1

Q ss_pred             HhcCCCcccCCccccccCCHHHHHHHHHHhccc
Q psy13123         94 AHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus        94 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      +|+||+||.|..|++.|.+.++|..|++.++++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            589999999999999999999999997654433

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=9.6e-14  Score=55.82  Aligned_cols=28  Identities=43%  Similarity=0.765  Sum_probs=26.4

Q ss_pred             CcccCCc--cccccCCHHHHHHHHHHhccc
Q psy13123         99 KKFACET--CGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus        99 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      |||.|.+  |+++|...++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899988  999999999999999999997

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.39  E-value=1.4e-13  Score=57.38  Aligned_cols=33  Identities=27%  Similarity=0.470  Sum_probs=29.8

Q ss_pred             CCCCCccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123         11 ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        11 ~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      ++|++||.|.+|++.|....+|..|+++|++..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            689999999999999999999999999998654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.5e-13  Score=55.32  Aligned_cols=28  Identities=50%  Similarity=0.943  Sum_probs=26.1

Q ss_pred             CcccCCc--cccccCCHHHHHHHHHHhccc
Q psy13123         99 KKFACET--CGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus        99 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      |||.|.+  ||++|...++|..|+|+||||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899976  999999999999999999997

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=4e-13  Score=56.57  Aligned_cols=33  Identities=18%  Similarity=0.367  Sum_probs=28.5

Q ss_pred             CCCCCCCccccCcchhccCChhhHHHHHHHhCC
Q psy13123          9 PLATTTSAYQCGECGKQFTRKFSLNAHLHVHYG   41 (129)
Q Consensus         9 ~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~   41 (129)
                      ++|+|++||.|++|++.|...++|..|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            589999999999999999999999999765443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.35  E-value=7e-14  Score=62.41  Aligned_cols=39  Identities=23%  Similarity=0.534  Sum_probs=34.0

Q ss_pred             HHHHHHHhcCCCcccCCc--cccccCCHHHHHHHHHHhcccC
Q psy13123         88 LKRHIDAHLGVKKFACET--CGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        88 l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +..|+ .|++++||.|.+  |++.|...++|..|+++||||+
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            44455 489999999977  9999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.7e-13  Score=56.53  Aligned_cols=29  Identities=38%  Similarity=0.710  Sum_probs=20.9

Q ss_pred             ccCCc--cccccCCHHHHHHHHHHhcccCCC
Q psy13123        101 FACET--CGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus       101 ~~C~~--C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      |.|+.  ||++|...++|.+|+++|+||+||
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy   32 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDY   32 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCE
Confidence            45654  777777777777777777777776

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.2e-13  Score=54.44  Aligned_cols=29  Identities=45%  Similarity=0.847  Sum_probs=26.6

Q ss_pred             CcccCC--ccccccCCHHHHHHHHHHhcccC
Q psy13123         99 KKFACE--TCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus        99 ~~~~C~--~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      +||.|+  .|++.|...++|..|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            589995  59999999999999999999996

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.29  E-value=8.1e-13  Score=52.83  Aligned_cols=29  Identities=24%  Similarity=0.581  Sum_probs=24.8

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      +||.|++|+++|...+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57888888888888888888888888875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.28  E-value=7e-13  Score=52.40  Aligned_cols=28  Identities=32%  Similarity=0.729  Sum_probs=24.7

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCC
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYG   41 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~   41 (129)
                      |+||.|++|++.|...++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5789999999999999999999998875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.5e-12  Score=51.28  Aligned_cols=29  Identities=31%  Similarity=0.667  Sum_probs=24.3

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      +||.|.+||++|...++|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888888764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.18  E-value=2.6e-12  Score=57.21  Aligned_cols=40  Identities=20%  Similarity=0.505  Sum_probs=32.9

Q ss_pred             CCCCCCCCCCCCCccccCc--chhccCChhhHHHHHHHhCCCC
Q psy13123          3 EIRPRDPLATTTSAYQCGE--CGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus         3 ~l~~~~~~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      .|..|. .+++++||.|..  |++.|...++|..|+++|+|++
T Consensus         6 ~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            344555 489999999976  9999999999999999998875

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=6.4e-12  Score=49.94  Aligned_cols=27  Identities=37%  Similarity=0.855  Sum_probs=24.8

Q ss_pred             CcccCCc--cccccCCHHHHHHHHHHhcc
Q psy13123         99 KKFACET--CGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        99 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~  125 (129)
                      |||.|.+  |+++|...++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899977  99999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=6e-12  Score=48.48  Aligned_cols=26  Identities=38%  Similarity=0.807  Sum_probs=22.7

Q ss_pred             CccccCcchhccCChhhHHHHHHHhC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      +||+|.+||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58899999999999999999998874

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.14  E-value=1.4e-11  Score=50.11  Aligned_cols=29  Identities=28%  Similarity=0.714  Sum_probs=26.2

Q ss_pred             CCcccCCc--cccccCCHHHHHHHHHHhccc
Q psy13123         98 VKKFACET--CGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus        98 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      |+||.|.+  |++.|...++|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999977  999999999999999999864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2.3e-11  Score=50.91  Aligned_cols=32  Identities=38%  Similarity=0.882  Sum_probs=26.7

Q ss_pred             cccCc--chhccCChhhHHHHHHHhCCCCCccCC
Q psy13123         17 YQCGE--CGKQFTRKFSLNAHLHVHYGSSNYKCP   48 (129)
Q Consensus        17 ~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~c~   48 (129)
                      |.|+.  |+++|.....|..|+++|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56765  888888888888888888888888886

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=2.3e-11  Score=47.76  Aligned_cols=26  Identities=35%  Similarity=0.742  Sum_probs=23.3

Q ss_pred             CcccCCc--cccccCCHHHHHHHHHHhc
Q psy13123         99 KKFACET--CGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        99 ~~~~C~~--C~~~f~~~~~l~~h~~~h~  124 (129)
                      +||.|.+  ||++|...++|.+|+++||
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5889976  9999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=9.6e-11  Score=46.86  Aligned_cols=28  Identities=32%  Similarity=0.622  Sum_probs=23.5

Q ss_pred             CccccCc--chhccCChhhHHHHHHHhCCC
Q psy13123         15 SAYQCGE--CGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        15 ~~~~C~~--C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      +||.|..  |+++|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=9.3e-11  Score=46.98  Aligned_cols=28  Identities=39%  Similarity=0.949  Sum_probs=24.2

Q ss_pred             CccccCc--chhccCChhhHHHHHHHhCCC
Q psy13123         15 SAYQCGE--CGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        15 ~~~~C~~--C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      +||.|+.  |+++|...++|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5888976  999999999999999998875

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2e-10  Score=45.11  Aligned_cols=31  Identities=42%  Similarity=0.704  Sum_probs=27.1

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhcccCCC
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGECKR  129 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e~p~  129 (129)
                      +...|..||+.|...-.|.+|.-.|.+|+||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3457889999999999999999999999998

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.9e-10  Score=45.85  Aligned_cols=29  Identities=38%  Similarity=0.739  Sum_probs=24.4

Q ss_pred             CccccC--cchhccCChhhHHHHHHHhCCCC
Q psy13123         15 SAYQCG--ECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        15 ~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      +||.|+  .|++.|...++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578885  59999999999999999998875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.1e-09  Score=40.10  Aligned_cols=26  Identities=54%  Similarity=0.962  Sum_probs=23.4

Q ss_pred             cccCCccccccCCHHHHHHHHHHhcc
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      |.+|+.|++.|+....|..|+|.|||
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46899999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.1e-09  Score=41.14  Aligned_cols=29  Identities=28%  Similarity=0.635  Sum_probs=25.2

Q ss_pred             CCcccCCccccccCCHHHHHHHHHHhccc
Q psy13123         98 VKKFACETCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      ++||+|..|...-..++.|.-|+|.|||+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57899999988888899999999999875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=1.8e-09  Score=40.86  Aligned_cols=27  Identities=37%  Similarity=0.755  Sum_probs=24.5

Q ss_pred             CCcccCCccccccCCHHHHHHHHHHhc
Q psy13123         98 VKKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      |+||.|..||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999885

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.77  E-value=2.5e-09  Score=43.27  Aligned_cols=29  Identities=31%  Similarity=0.636  Sum_probs=24.7

Q ss_pred             CCccccCc--chhccCChhhHHHHHHHhCCC
Q psy13123         14 TSAYQCGE--CGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        14 ~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      |+||.|..  |++.|...++|..|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57899977  999999999999999988753

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=1.6e-09  Score=42.83  Aligned_cols=27  Identities=33%  Similarity=0.865  Sum_probs=22.9

Q ss_pred             CccccCc--chhccCChhhHHHHHHHhCC
Q psy13123         15 SAYQCGE--CGKQFTRKFSLNAHLHVHYG   41 (129)
Q Consensus        15 ~~~~C~~--C~~~~~~~~~l~~h~~~~~~   41 (129)
                      +||.|..  |+++|...++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788877  99999999999999888875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=7e-09  Score=38.68  Aligned_cols=26  Identities=42%  Similarity=0.776  Sum_probs=23.4

Q ss_pred             ccCCccccccCCHHHHHHHHHHhccc
Q psy13123        101 FACETCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      ..|.+|||+|.-++.|.+|+-+||||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46889999999999999999999987

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=5.9e-09  Score=40.73  Aligned_cols=26  Identities=31%  Similarity=0.686  Sum_probs=21.8

Q ss_pred             CccccCc--chhccCChhhHHHHHHHhC
Q psy13123         15 SAYQCGE--CGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        15 ~~~~C~~--C~~~~~~~~~l~~h~~~~~   40 (129)
                      +||.|..  ||++|...++|..|++.|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5788877  8899988888988888875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.2e-08  Score=37.25  Aligned_cols=26  Identities=42%  Similarity=0.830  Sum_probs=21.1

Q ss_pred             ccccCcchhccCChhhHHHHHHHhCC
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHYG   41 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~~   41 (129)
                      |++|+.|++.|..+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56788888888888888888888764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=4.5e-08  Score=36.83  Aligned_cols=27  Identities=37%  Similarity=0.620  Sum_probs=23.6

Q ss_pred             ccCCccccccCCHHHHHHHHHHhcccC
Q psy13123        101 FACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      |.|+.||....-.|.|..|.|+||+|.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            678889999999999999999999874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=3.8e-08  Score=37.68  Aligned_cols=28  Identities=43%  Similarity=0.959  Sum_probs=21.2

Q ss_pred             CCcccCCccccccCCHHHHHHHHHHhcc
Q psy13123         98 VKKFACETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      |+||+|++|+..|....-+.-|.|.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4677777777777777777777777765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=4.1e-08  Score=38.43  Aligned_cols=31  Identities=35%  Similarity=0.665  Sum_probs=27.1

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCCCCc
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGSSNY   45 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~   45 (129)
                      +..-|..||+.|.+...|.+|..+|++++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4467999999999999999999999999986

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=3.8e-08  Score=36.65  Aligned_cols=27  Identities=41%  Similarity=0.727  Sum_probs=22.2

Q ss_pred             ccccCcchhccCChhhHHHHHHHhCCC
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      .+.|.+||++|...+.|.+|+..|+++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            367888888888888888888888764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=5.7e-08  Score=36.35  Aligned_cols=29  Identities=24%  Similarity=0.486  Sum_probs=25.8

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCCC
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      ++||+|..|.....+.+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999999999999999999874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.34  E-value=2.1e-07  Score=33.56  Aligned_cols=24  Identities=38%  Similarity=0.775  Sum_probs=21.8

Q ss_pred             ccCCccccccCCHHHHHHHHHHhc
Q psy13123        101 FACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      |+|..|.++|.-.+.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999885

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=3.2e-07  Score=34.02  Aligned_cols=26  Identities=31%  Similarity=0.655  Sum_probs=23.8

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhc
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      +||+|..|..+-..++.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68999999999999999999999985

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=4.2e-07  Score=34.69  Aligned_cols=29  Identities=38%  Similarity=0.747  Sum_probs=23.2

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCCC
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      ++||.|+.|+..|+.+.-+..|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57888888888888888888888888664

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.24  E-value=3.4e-07  Score=34.49  Aligned_cols=26  Identities=27%  Similarity=0.729  Sum_probs=18.9

Q ss_pred             CCccccCcchhccCChhhHHHHHHHh
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVH   39 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~   39 (129)
                      ++||.|..||..|.......+|..+|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            46777777777777777777777665

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=5.3e-07  Score=34.43  Aligned_cols=27  Identities=33%  Similarity=0.762  Sum_probs=20.9

Q ss_pred             CcccCCc--cccccCCHHHHHHHHHHhcc
Q psy13123         99 KKFACET--CGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus        99 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~  125 (129)
                      +||.|..  |++++...+.|+.|+++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5777855  88888888888888887654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=1.1e-06  Score=32.19  Aligned_cols=26  Identities=54%  Similarity=0.731  Sum_probs=21.7

Q ss_pred             cCCccccccCCHHHHHHHHHHhcccC
Q psy13123        102 ACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus       102 ~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      .|+.|.+.|.+.--|.-|-|.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57888888888888888888888875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.18  E-value=1.1e-06  Score=32.97  Aligned_cols=29  Identities=31%  Similarity=0.746  Sum_probs=23.0

Q ss_pred             CCcccCCccccccCCHHHHHHHHHHhccc
Q psy13123         98 VKKFACETCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      +..|.|..|...|.....|+.|+-.|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45677888888888888888888888876

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=1.5e-07  Score=36.29  Aligned_cols=28  Identities=43%  Similarity=0.743  Sum_probs=22.2

Q ss_pred             CcccCCc--cccccCCHHHHHHHH-HHhccc
Q psy13123         99 KKFACET--CGKLFSSKHGLKYHV-RTHKGE  126 (129)
Q Consensus        99 ~~~~C~~--C~~~f~~~~~l~~h~-~~h~~e  126 (129)
                      +||.|..  |+|+|...|+-..|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            5788865  888998888888886 888654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1.2e-06  Score=32.96  Aligned_cols=28  Identities=21%  Similarity=0.521  Sum_probs=23.5

Q ss_pred             CcccCCccccccCCHHHHHHHHHHhccc
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      +||+|..|.....+.++|..|++.-+++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            5788999988889999999998876665

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1.1e-06  Score=32.94  Aligned_cols=27  Identities=30%  Similarity=0.620  Sum_probs=21.9

Q ss_pred             cccCcchhccCChhhHHHHHHHhCCCC
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      |.|+.||......+.|..|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            678888888888888888888888763

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.14  E-value=1.3e-06  Score=32.76  Aligned_cols=29  Identities=28%  Similarity=0.722  Sum_probs=23.9

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCCC
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      +..|.|..|...|+.+-.|..||.+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45688888888888888888888888874

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=1.5e-06  Score=32.78  Aligned_cols=25  Identities=28%  Similarity=0.587  Sum_probs=18.7

Q ss_pred             CcccCCccccccCCHHHHHHHHHHh
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h  123 (129)
                      +||.|..|...-...++|..|+++.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhcc
Confidence            4677777777777777887777763

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.06  E-value=1.1e-06  Score=33.07  Aligned_cols=28  Identities=50%  Similarity=0.810  Sum_probs=23.9

Q ss_pred             CcccCC--ccccccCCHHHHHHHHHHhccc
Q psy13123         99 KKFACE--TCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus        99 ~~~~C~--~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      +||.|.  .|.|.|.....|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            467774  4999999999999999999987

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.9e-06  Score=34.97  Aligned_cols=27  Identities=30%  Similarity=0.718  Sum_probs=22.7

Q ss_pred             cCCCcccCCccccccCCHHHHHHHHHH
Q psy13123         96 LGVKKFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus        96 ~~~~~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      +|-+||+|..|+|.|-+...+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            467899999999999999998888543

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.93  E-value=4.9e-06  Score=34.06  Aligned_cols=26  Identities=27%  Similarity=0.646  Sum_probs=13.1

Q ss_pred             cccCCccccccCCHHHHHHHHHHhcc
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      .|.|..|++.|.+...|=-|++.|..
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             ccCCCCCCCccCCcccccchHhhhcc
Confidence            34555555555555555555555443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=3.3e-06  Score=31.64  Aligned_cols=24  Identities=29%  Similarity=0.621  Sum_probs=20.0

Q ss_pred             ccccCcchhccCChhhHHHHHHHh
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVH   39 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~   39 (129)
                      ||.|..|..+|+.+.+|+.||.+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            678888999999988888888754

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=5.2e-06  Score=30.66  Aligned_cols=27  Identities=33%  Similarity=0.642  Sum_probs=24.0

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhC
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      .+|++|..|...-.+.+.|..|+++|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            368999999999999999999999885

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.89  E-value=6.6e-06  Score=30.72  Aligned_cols=26  Identities=35%  Similarity=0.616  Sum_probs=21.8

Q ss_pred             CcccCC--ccccccCCHHHHHHHHHHhc
Q psy13123         99 KKFACE--TCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        99 ~~~~C~--~C~~~f~~~~~l~~h~~~h~  124 (129)
                      .||+|+  .|++.|...+-|.+|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            478885  49999999999999998873

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.80  E-value=1.1e-05  Score=29.37  Aligned_cols=26  Identities=35%  Similarity=0.718  Sum_probs=21.3

Q ss_pred             ccCcchhccCChhhHHHHHHHhCCCC
Q psy13123         18 QCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        18 ~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      .|+.|.++|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58888888888888888888888764

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.74  E-value=1.4e-05  Score=32.68  Aligned_cols=29  Identities=28%  Similarity=0.667  Sum_probs=19.5

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCCC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGSS   43 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~   43 (129)
                      +.|+|..|++.|.+...|-.||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            35677777777777777777777765443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.71  E-value=9.9e-06  Score=29.07  Aligned_cols=24  Identities=42%  Similarity=0.884  Sum_probs=18.0

Q ss_pred             cccCcchhccCChhhHHHHHHHhC
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      |+|..|+.+|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            467778888888888887777663

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.4e-05  Score=30.43  Aligned_cols=26  Identities=31%  Similarity=0.560  Sum_probs=17.9

Q ss_pred             CccccCc--chhccCChhhHHHHHHHhC
Q psy13123         15 SAYQCGE--CGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        15 ~~~~C~~--C~~~~~~~~~l~~h~~~~~   40 (129)
                      +||.|..  |++++.+.++|..|+..++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4667755  7777777777777776544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.5e-05  Score=29.79  Aligned_cols=24  Identities=25%  Similarity=0.624  Sum_probs=20.4

Q ss_pred             cccCCccccccCCHHHHHHHHHHh
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~h  123 (129)
                      ||.|..|+.+|....+|..|++.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            678889999999999999998763

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=2.9e-05  Score=28.69  Aligned_cols=26  Identities=35%  Similarity=0.478  Sum_probs=22.0

Q ss_pred             cccCCccccccCCHHHHHHHHHHhcc
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      |.+|..|..+.+....|+.|.|+|..
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56788898999999999999998864

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.58  E-value=2.2e-05  Score=29.40  Aligned_cols=28  Identities=36%  Similarity=0.666  Sum_probs=21.9

Q ss_pred             CccccCc--chhccCChhhHHHHHHHhCCC
Q psy13123         15 SAYQCGE--CGKQFTRKFSLNAHLHVHYGS   42 (129)
Q Consensus        15 ~~~~C~~--C~~~~~~~~~l~~h~~~~~~~   42 (129)
                      +||.|.+  |++.|.....|.+|-..|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4777755  888888888888888888764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=9.6e-05  Score=29.94  Aligned_cols=26  Identities=35%  Similarity=0.717  Sum_probs=13.4

Q ss_pred             CCcccC--CccccccCCHHHHHHHHHHh
Q psy13123         98 VKKFAC--ETCGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus        98 ~~~~~C--~~C~~~f~~~~~l~~h~~~h  123 (129)
                      ++||.|  +.|+..|.....|..|.+.|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            455555  33555555555555555444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00013  Score=27.38  Aligned_cols=26  Identities=23%  Similarity=0.473  Sum_probs=18.5

Q ss_pred             CccccCcchhccCChhhHHHHHHHhC
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      +||.|..|.....+.++|..|..+.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            46777777777777777777776543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=8.6e-05  Score=30.50  Aligned_cols=22  Identities=27%  Similarity=0.620  Sum_probs=9.7

Q ss_pred             CCCccCCcchhhhcchhHHHHH
Q psy13123         42 SSNYKCPLCGKFFIQLCHMKDH   63 (129)
Q Consensus        42 ~~~~~c~~c~~~~~~~~~l~~~   63 (129)
                      .+||.|..|++.|....++.+|
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH   24 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRH   24 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHh
Confidence            3444444444444444444443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.00012  Score=29.69  Aligned_cols=28  Identities=32%  Similarity=0.663  Sum_probs=22.5

Q ss_pred             CCCcccc--CcchhccCChhhHHHHHHHhC
Q psy13123         13 TTSAYQC--GECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        13 ~~~~~~C--~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      .++||.|  +-|+..|.+...|..|..-|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4789999  558899999988888877664

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00013  Score=28.87  Aligned_cols=20  Identities=35%  Similarity=0.494  Sum_probs=15.8

Q ss_pred             ccccCCHHHHHHHHHHhccc
Q psy13123        107 GKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus       107 ~~~f~~~~~l~~h~~~h~~e  126 (129)
                      ++.|...-.|..|+|+||||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45678888888888888886

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=8.9e-05  Score=26.50  Aligned_cols=22  Identities=36%  Similarity=0.886  Sum_probs=15.6

Q ss_pred             ccccCcchhccCChhhHHHHHH
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLH   37 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~   37 (129)
                      ||+|..|...|..+..|+.||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            5677777777777777777664

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00012  Score=27.34  Aligned_cols=24  Identities=17%  Similarity=0.480  Sum_probs=18.2

Q ss_pred             CccccCcchhccCChhhHHHHHHH
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHV   38 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~   38 (129)
                      +||+|..|....+..++|..|+..
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            477888888877788888777754

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.21  E-value=0.00015  Score=26.98  Aligned_cols=25  Identities=36%  Similarity=0.725  Sum_probs=17.3

Q ss_pred             CccccCc--chhccCChhhHHHHHHHh
Q psy13123         15 SAYQCGE--CGKQFTRKFSLNAHLHVH   39 (129)
Q Consensus        15 ~~~~C~~--C~~~~~~~~~l~~h~~~~   39 (129)
                      .||.|+.  |++.|...+-|.+|..+|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677754  777777777777776655

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.12  E-value=0.00016  Score=27.68  Aligned_cols=23  Identities=22%  Similarity=0.615  Sum_probs=14.6

Q ss_pred             cccCCccccccCCHHHHHHHHHH
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      ||.|..|++.|.....|-+|+..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            46666666666666666666543

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00026  Score=30.12  Aligned_cols=25  Identities=32%  Similarity=0.732  Sum_probs=21.5

Q ss_pred             CcccCCccccccCCHHHHHHHHHHh
Q psy13123         99 KKFACETCGKLFSSKHGLKYHVRTH  123 (129)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~h~~~h  123 (129)
                      ..|.|..|+|.|....-|++|.-.|
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhHHhc
Confidence            3578999999999999999998776

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00018  Score=27.53  Aligned_cols=26  Identities=50%  Similarity=0.908  Sum_probs=18.6

Q ss_pred             CCeeccc--ccccccChhHHHHHH-HHhc
Q psy13123         71 KPYVCTY--CGKAFVRASDLKRHI-DAHL   96 (129)
Q Consensus        71 ~~~~c~~--c~~~~~~~~~l~~h~-~~~~   96 (129)
                      +||.|..  |.++|.+.++-..|+ +.|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4677766  888888887777776 5554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.97  E-value=0.00034  Score=24.95  Aligned_cols=22  Identities=27%  Similarity=0.721  Sum_probs=15.1

Q ss_pred             cccCCccccccCCHHHHHHHHH
Q psy13123        100 KFACETCGKLFSSKHGLKYHVR  121 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~  121 (129)
                      ||+|..|...|-+..+|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            5677777777777777766653

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.84  E-value=0.00041  Score=25.35  Aligned_cols=21  Identities=38%  Similarity=0.779  Sum_probs=13.4

Q ss_pred             ccccCcchhccCChhhHHHHH
Q psy13123         16 AYQCGECGKQFTRKFSLNAHL   36 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~   36 (129)
                      ||.|..||+-+-.+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            466666776666666666554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.81  E-value=0.00044  Score=26.40  Aligned_cols=23  Identities=43%  Similarity=0.882  Sum_probs=19.2

Q ss_pred             CeecccccccccChhHHHHHHHH
Q psy13123         72 PYVCTYCGKAFVRASDLKRHIDA   94 (129)
Q Consensus        72 ~~~c~~c~~~~~~~~~l~~h~~~   94 (129)
                      ||.|..|++-|...+.+..|++.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            68888999999888888888764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.70  E-value=0.001  Score=25.20  Aligned_cols=27  Identities=30%  Similarity=0.831  Sum_probs=21.5

Q ss_pred             cccC--CccccccCCHHHHHHHHHHhccc
Q psy13123        100 KFAC--ETCGKLFSSKHGLKYHVRTHKGE  126 (129)
Q Consensus       100 ~~~C--~~C~~~f~~~~~l~~h~~~h~~e  126 (129)
                      .|.|  +.|+-.|.....|..|+-.||||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4555  45888888888899999999887

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.59  E-value=0.0012  Score=24.04  Aligned_cols=21  Identities=38%  Similarity=0.741  Sum_probs=14.7

Q ss_pred             cccCCccccccCCHHHHHHHH
Q psy13123        100 KFACETCGKLFSSKHGLKYHV  120 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~  120 (129)
                      ||+|..||+.+-...+|-.|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            567777777777777776664

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.0014  Score=25.58  Aligned_cols=26  Identities=38%  Similarity=0.816  Sum_probs=21.5

Q ss_pred             ccccCcchhccCChhhHHHHHHHhCC
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVHYG   41 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~~~   41 (129)
                      .|.|..||++|..+..+.+|...-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48899999999999888888776554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0017  Score=29.71  Aligned_cols=45  Identities=20%  Similarity=0.508  Sum_probs=25.6

Q ss_pred             CCCCCCCCCCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchhh
Q psy13123          6 PRDPLATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKF   53 (129)
Q Consensus         6 ~~~~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~~   53 (129)
                      ..++-.+....|.|+.|++.|..   |..-.........|.|..|+..
T Consensus         4 ~~~rd~~~~~~y~Cp~C~~~ys~---Lda~~L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_           4 TDERDSTNRASFKCPVCSSTFTD---LEANQLFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEH---HHHHHHEETTTTEEBCSSSCCB
T ss_pred             hhhhccccCCceECCCCCCCcch---hhHHHhcCcCCCeEEecCCCCE
Confidence            34455555666777777777633   3333334444556677777653

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0018  Score=23.83  Aligned_cols=20  Identities=30%  Similarity=0.715  Sum_probs=17.2

Q ss_pred             ccccccCCHHHHHHHHHHhc
Q psy13123        105 TCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus       105 ~C~~~f~~~~~l~~h~~~h~  124 (129)
                      .|+|.|...+.++.|+.+|-
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            58899999999999998874

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0028  Score=26.86  Aligned_cols=25  Identities=40%  Similarity=0.680  Sum_probs=19.6

Q ss_pred             CccccCcchhccCChhhHHHHHHHh
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVH   39 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~   39 (129)
                      ..|.|..|++.|.+..-|..|...|
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhHHhc
Confidence            3577888888888888888887776

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.14  E-value=0.0045  Score=26.11  Aligned_cols=28  Identities=14%  Similarity=0.383  Sum_probs=20.1

Q ss_pred             CCCcccCCccccccCCHHHHHHHHHHhc
Q psy13123         97 GVKKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        97 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      .+.|-.|+.|+-...++.+|++|+-.-+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            3567778888877788888887766533

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0018  Score=23.72  Aligned_cols=24  Identities=29%  Similarity=0.605  Sum_probs=19.9

Q ss_pred             ccccCcchhccCChhhHHHHHHHh
Q psy13123         16 AYQCGECGKQFTRKFSLNAHLHVH   39 (129)
Q Consensus        16 ~~~C~~C~~~~~~~~~l~~h~~~~   39 (129)
                      |-+|++|..+..++..|..|.++|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            457888988888888888888877

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.003  Score=24.58  Aligned_cols=26  Identities=42%  Similarity=0.953  Sum_probs=18.3

Q ss_pred             CeecccccccccChhHHHHHHHHhcC
Q psy13123         72 PYVCTYCGKAFVRASDLKRHIDAHLG   97 (129)
Q Consensus        72 ~~~c~~c~~~~~~~~~l~~h~~~~~~   97 (129)
                      .|+|..|++.|.....+..|....++
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888887777777655443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.0028  Score=24.96  Aligned_cols=21  Identities=24%  Similarity=0.200  Sum_probs=15.0

Q ss_pred             ccccccChhHHHHHHHHhcCC
Q psy13123         78 CGKAFVRASDLKRHIDAHLGV   98 (129)
Q Consensus        78 c~~~~~~~~~l~~h~~~~~~~   98 (129)
                      -++.|.....|..|++.|++|
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            345677777888888887764

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0041  Score=22.69  Aligned_cols=22  Identities=32%  Similarity=0.754  Sum_probs=17.5

Q ss_pred             ccCCccccccCCHHHHHHHHHH
Q psy13123        101 FACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      |.|+.|+-.....++|+-|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            6788888888888888888775

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.006  Score=22.59  Aligned_cols=24  Identities=25%  Similarity=0.614  Sum_probs=16.8

Q ss_pred             cccCcchhccCChhhHHHHHHHhC
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      |.|..||+..++...+..|....+
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             eechhHHHHHhhccCceEEEeecc
Confidence            677778887777777777765443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.70  E-value=0.0059  Score=21.69  Aligned_cols=22  Identities=32%  Similarity=0.688  Sum_probs=15.6

Q ss_pred             ccCCccccccCCHHHHHHHHHH
Q psy13123        101 FACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      |.|+.|=+.|....++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5677777777777777777665

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.33  E-value=0.009  Score=21.57  Aligned_cols=20  Identities=40%  Similarity=0.727  Sum_probs=16.2

Q ss_pred             ccccccCCHHHHHHHHHHhc
Q psy13123        105 TCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus       105 ~C~~~f~~~~~l~~h~~~h~  124 (129)
                      -|+++|...-.|.-|+.+|+
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            48888888888888888776

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.29  E-value=0.0072  Score=23.24  Aligned_cols=23  Identities=39%  Similarity=0.683  Sum_probs=19.3

Q ss_pred             cccCCccccccCCHHHHHHHHHH
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      .|-|.-||-.|++.+.|..|+..
T Consensus         8 rf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ceeccccceeecChhHHHhhhhe
Confidence            46788899999999999998754

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.29  E-value=0.0079  Score=23.45  Aligned_cols=26  Identities=19%  Similarity=0.594  Sum_probs=19.8

Q ss_pred             CCCcccCCccccccCCHHHHHHHHHH
Q psy13123         97 GVKKFACETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus        97 ~~~~~~C~~C~~~f~~~~~l~~h~~~  122 (129)
                      ++..|.|..|.+.+...+++.+|--+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            34568888888888888888887554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.56  E-value=0.024  Score=23.83  Aligned_cols=25  Identities=20%  Similarity=0.361  Sum_probs=14.9

Q ss_pred             CCccccCcchhccCChhhHHHHHHH
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHV   38 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~   38 (129)
                      +.|-.|+.|+-......+|.+|+..
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHH
Confidence            3455666666666666666666554

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=93.55  E-value=0.014  Score=23.44  Aligned_cols=26  Identities=31%  Similarity=0.625  Sum_probs=16.6

Q ss_pred             CCccccCcchhccCChhhHHHHHHHhCCCCCccCCcchh
Q psy13123         14 TSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGK   52 (129)
Q Consensus        14 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~   52 (129)
                      ++.|.|..||...             .++.|-.|+.|+.
T Consensus         3 ~~~~vC~vCGyi~-------------~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYIH-------------KGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCEE-------------ESSCCSBCTTTCC
T ss_pred             CCEEECCCCCCEe-------------eCCCCCcCCCCCC
Confidence            4457777787763             2445667777764

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.87  E-value=0.019  Score=23.20  Aligned_cols=25  Identities=32%  Similarity=0.802  Sum_probs=16.2

Q ss_pred             CccccCcchhccCChhhHHHHHHHhCCCCCccCCcchh
Q psy13123         15 SAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGK   52 (129)
Q Consensus        15 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~c~~c~~   52 (129)
                      +.|.|..||..+             .++.|-.|+.|+.
T Consensus         4 ~~~~C~vCG~i~-------------~g~~P~~CPvCg~   28 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDEAPEYCPVCGA   28 (37)
T ss_dssp             CEEECTTTCCEE-------------ESCCCSBCTTTCC
T ss_pred             cEEECCCCCCEe-------------cCCCCCcCCCCCC
Confidence            457777787763             2455667777764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.75  E-value=0.009  Score=27.70  Aligned_cols=25  Identities=20%  Similarity=0.471  Sum_probs=19.8

Q ss_pred             CCCccccCcchhccCChhhHHHHHH
Q psy13123         13 TTSAYQCGECGKQFTRKFSLNAHLH   37 (129)
Q Consensus        13 ~~~~~~C~~C~~~~~~~~~l~~h~~   37 (129)
                      |...|-|..|++.|.+...|..|++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCEEecccccCccCCHHHHHHHHc
Confidence            4556888888888888888888774

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.05  E-value=0.023  Score=26.25  Aligned_cols=21  Identities=33%  Similarity=0.719  Sum_probs=13.7

Q ss_pred             ccCCccccccCCHHHHHHHHH
Q psy13123        101 FACETCGKLFSSKHGLKYHVR  121 (129)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~h~~  121 (129)
                      |-|..|++.|.....|..|.+
T Consensus        16 fYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTT
T ss_pred             EecccccCccCCHHHHHHHHc
Confidence            556666666666666666654

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.87  E-value=0.16  Score=22.92  Aligned_cols=31  Identities=29%  Similarity=0.623  Sum_probs=23.5

Q ss_pred             CCCCCCccccCcchhccCChhhHHHHHHHhC
Q psy13123         10 LATTTSAYQCGECGKQFTRKFSLNAHLHVHY   40 (129)
Q Consensus        10 ~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~   40 (129)
                      +......|.|..|+..|.....|..|+..|.
T Consensus        12 ~~~~s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          12 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             cccCCceeeechhHHHHhhHHHHHHHHHhcc
Confidence            3344455889999999888888888887774

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.24  E-value=0.088  Score=23.77  Aligned_cols=26  Identities=23%  Similarity=0.585  Sum_probs=16.6

Q ss_pred             cccCCccccccCCHHHHHHHHHHhcc
Q psy13123        100 KFACETCGKLFSSKHGLKYHVRTHKG  125 (129)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~h~~~h~~  125 (129)
                      .|.|..|.-.|-....|..|+-.|-.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhccH
Confidence            46666666666666666666666543

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.00  E-value=0.24  Score=18.02  Aligned_cols=19  Identities=32%  Similarity=0.697  Sum_probs=13.4

Q ss_pred             CccccccCCHHHHHHHHHH
Q psy13123        104 ETCGKLFSSKHGLKYHVRT  122 (129)
Q Consensus       104 ~~C~~~f~~~~~l~~h~~~  122 (129)
                      +.||+-|+...-|..|.+.
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4577888877777777553

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.34  E-value=0.33  Score=18.95  Aligned_cols=26  Identities=19%  Similarity=0.188  Sum_probs=18.3

Q ss_pred             cCCccccccCCHHHHHHHHHHhcccC
Q psy13123        102 ACETCGKLFSSKHGLKYHVRTHKGEC  127 (129)
Q Consensus       102 ~C~~C~~~f~~~~~l~~h~~~h~~e~  127 (129)
                      -|..|.-.|.+.+.+..|.+....-+
T Consensus        10 YC~~CDI~Fn~~~T~~aHKk~YCss~   35 (36)
T d1fu9a_          10 YCSTCDISFNYVKTYLAHKQFYCKNK   35 (36)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTSCCC
T ss_pred             HHhhCCceehhHHHHHHHHHhcccCC
Confidence            36777778888888888877654433

>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: PF0610-like
domain: Hypothetical protein PF0610
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.91  E-value=0.14  Score=25.67  Aligned_cols=29  Identities=24%  Similarity=0.501  Sum_probs=18.6

Q ss_pred             CCccCCcchhhhcchhHHHHHHHHhCCCCCeecccccccc
Q psy13123         43 SNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAF   82 (129)
Q Consensus        43 ~~~~c~~c~~~~~~~~~l~~~~~~~~~~~~~~c~~c~~~~   82 (129)
                      .|..|..||..|..           .-.+|-.|+.|...+
T Consensus        66 ~Pp~CrkCGfvFr~-----------~~kkPSRCP~CKSE~   94 (105)
T d2gmga1          66 KPAQCRKCGFVFKA-----------EINIPSRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCCC-----------CSSCCSSCSSSCCCC
T ss_pred             eChhhhhcCCeecc-----------cCCCCCCCCCCCCcc
Confidence            46788888877732           113577788887544

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.30  E-value=0.53  Score=18.28  Aligned_cols=22  Identities=32%  Similarity=0.557  Sum_probs=13.3

Q ss_pred             cccCcchhccCChhhHHHHHHH
Q psy13123         17 YQCGECGKQFTRKFSLNAHLHV   38 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~~~   38 (129)
                      ..|-+|-.+|+..-.+.+|+..
T Consensus         4 ltclecmrtfkssfsiwrhqve   25 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVE   25 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHhhhe
Confidence            3566666666666666666553

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.13  E-value=0.36  Score=20.28  Aligned_cols=20  Identities=25%  Similarity=0.810  Sum_probs=13.7

Q ss_pred             cccCcchhccCChhhHHHHH
Q psy13123         17 YQCGECGKQFTRKFSLNAHL   36 (129)
Q Consensus        17 ~~C~~C~~~~~~~~~l~~h~   36 (129)
                      -.|..|+..|..+..++.|.
T Consensus         7 ~eC~lC~vKYs~~~SvrdHi   26 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDHI   26 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccCcccceeeeeecchHhhh
Confidence            46777777777776666665

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=82.34  E-value=0.19  Score=27.48  Aligned_cols=39  Identities=33%  Similarity=0.667  Sum_probs=27.7

Q ss_pred             hhHHHHHHHHhc--CC-----CcccCCccccccCCHHHHHHHHHHhc
Q psy13123         85 ASDLKRHIDAHL--GV-----KKFACETCGKLFSSKHGLKYHVRTHK  124 (129)
Q Consensus        85 ~~~l~~h~~~~~--~~-----~~~~C~~C~~~f~~~~~l~~h~~~h~  124 (129)
                      ...|..|++...  |.     +-|+|..||+-. ...+|.+|++.|-
T Consensus       124 GgrlieHiK~~m~~GqDyvFWQFYKCe~CgKYv-Die~~~~H~k~HG  169 (218)
T d2czra1         124 GAALVNHIKNNALAGQDYIFWQFYKCEECGKYV-DIENLEAHLREHG  169 (218)
T ss_dssp             HHHHHHHHHTTCCBTTTEEEEEEEECTTTCCEE-EGGGHHHHHHTTT
T ss_pred             hHHHHHHHHhccccCcceEEEEEeehhhcCcee-cHHHHHHHHHHcC
Confidence            356777877543  21     348999999754 6778899999874

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=81.44  E-value=0.11  Score=20.89  Aligned_cols=9  Identities=11%  Similarity=0.276  Sum_probs=4.7

Q ss_pred             ccCcchhcc
Q psy13123         18 QCGECGKQF   26 (129)
Q Consensus        18 ~C~~C~~~~   26 (129)
                      .|+.||..|
T Consensus         4 vc~~cG~~Y   12 (37)
T d2ak3a2           4 IHPGSGRVY   12 (37)
T ss_dssp             EETTTTEEE
T ss_pred             eeCCcCChh
Confidence            455555554