Psyllid ID: psy13144

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030-
MDSFDTKINTYEVFYSCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPLQYLMPNNAPMNVPPISAVETPVLEDTCNCAPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKPVQNEPVYTNPCHPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPGTCGQNANCRVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDPFTSCSPKPPEPVQPVIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFSGCYPKPPERTMWDTLPI
ccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEcccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEccccccEEEccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccEEEEcccccEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEcccccEEccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccEEEcccccccEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEccccccccccccccccccccccccccccccccccccccccccEEEccccccEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccc
ccccccEEccccEEEEcccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccEEEcccccEEEEccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccEEEccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEcccEEEEcccccccccccccccccccccccccccc
mdsfdtkintyevfyscppgttgspfvqckpivhepvytnpcqpspcgpnsqcrevnhqavcsclpnyfgsppacrpectvnsdcpldkscqnqkcadpcpgtcgqnanckvinhspicrckagftgdpftycnrippppppqedvpepvnpcypspcgpysqcrdingspscsclpsyigsppncrpeciqnsecpydkacinekcadpcpgfcppgttgspfvqckpivhepvytnpcqpspcgpnsqcrevnhqavcsclpnyfgsppacrpectvnsdcpldkscqnqkcadpcpgtcgqnanckvinhspicrckagftgdpftycnriplqylmpnnapmnvppisavetpvledtcncapnavckdevcvclpdfygdgyvscrpecvlnndcpsnkacikykcknpcvsgtcgegaiCDVINhavscncpagttgnpfvlckpvqnepvytnpchpspcgpnsqcrevnhqavcsclpnyfgsppacrpectvntdcpldkacfnqkcvdpcpgtcgqnancrvinhspictckpgftgdalaycnriplsnyVFEKILIQLMycpgttgnpfvlcklvqnepvytnpcqpspcgpnsqcrevnhqavcsclpnyfgsppacrpectvntdcpldkacfnqkcvdpcpdspppplesppeyvnpcipspcgpysqcrdiggspscsclpnyigappncrpecvmnsecpsneacinekcgdpcpgscgynaeckiinhtpictcpdgfigdpftscspkppepvqpviqedtcncvpnaecrdgvcvclpdyygdgyvscgpecilnndcpsnkacirnkfnkqavcsclpnyfgsppacrpectvntdcpldkacvnqkcvdpcpgscgqnancrvinhnavcnckpgftgeprircskippppppqdvpeyvnpcipspcgpnsqcrdingspscsclptfigappncrpeciqnsecpfdkacirekcidpcpgscgynalckvinhspictcpdgfvgdafsgcypkppertmwdtlpi
MDSFDTKINTYEVFYSCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPLQYLMPNNAPMNVPPISAVETPVLEDTCNCAPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKPVQNEPVYTNPCHPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPGTCGQNANCRVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDPFTSCSPKPPEPVQPVIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFSGcypkppertmwdtlpi
MDSFDTKINTYEVFYSCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIppppppqedvpepvnpCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADpcpgfcppgttgspfVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPLQYLMPNNAPMNVPPISAVETPVLEDTCNCAPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKPVQNEPVYTNPCHPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPGTCGQNANCRVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKcvdpcpdspppplesppeyvnpCIPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDPFTSCSPKPPEPVQPVIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIppppppQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFSGCYPKPPERTMWDTLPI
******KINTYEVFYSCPPGTTGSPFVQCKPIVHEPVYTNPCQP**CG**SQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCN**************************YSQCRDINGSPSCSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQP**CG*NSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPLQYLMPNNAPMNVPPISAVETPVLEDTCNCAPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKPVQNEPVYTNPCHPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPGTCGQNANCRVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNEPVYTNPCQP**CG**SQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVD*****************NPCIPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDPFTSC*********PVIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTG******************************************PSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFSGCYP*************
MDSFDTKINTYEVFYSCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPLQYLMPNNAPMNVPPISAVETPVLEDTCNCAPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKPVQNEPVYTNPCHPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPGTCGQNANCRVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDPFTSCSPKPPEPVQPVIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFSGCYPKPPERTMWDTLPI
MDSFDTKINTYEVFYSCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPLQYLMPNNAPMNVPPISAVETPVLEDTCNCAPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKPVQNEPVYTNPCHPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPGTCGQNANCRVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDPFTSCSPKPPEPVQPVIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFSGCYPKPPERTMWDTLPI
**SFDTKINTYEVFYSCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPLQYLMPNNAPMNVPPISAVETPVLEDTCNCAPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKPVQNEPVYTNPCHPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPGTCGQNANCRVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDPFTSCSPKPPEPVQPVIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFSGCYPKPPERTMW*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDSFDTKINTYEVFYSCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPLQYLMPNNAPMNVPPISAVETPVLEDTCNCAPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKPVQNEPVYTNPCHPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPGTCGQNANCRVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDPFTSCSPKPPEPVQPVIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFSGCYPKPPERTMWDTLPI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1031 2.2.26 [Sep-21-2011]
Q9R172 2319 Neurogenic locus notch ho yes N/A 0.801 0.356 0.250 9e-13
Q04721 2471 Neurogenic locus notch ho no N/A 0.510 0.212 0.246 3e-10
Q9UM47 2321 Neurogenic locus notch ho no N/A 0.748 0.332 0.244 5e-10
P100791064 Fibropellin-1 OS=Strongyl no N/A 0.705 0.683 0.231 7e-10
Q9QW30 2471 Neurogenic locus notch ho no N/A 0.693 0.289 0.243 9e-10
P46530 2437 Neurogenic locus notch ho no N/A 0.683 0.289 0.238 1e-09
Q01705 2531 Neurogenic locus notch ho yes N/A 0.781 0.318 0.246 1e-09
Q99466 2003 Neurogenic locus notch ho no N/A 0.714 0.367 0.239 2e-09
P46531 2555 Neurogenic locus notch ho no N/A 0.750 0.302 0.242 1e-08
P34576 3767 Transmembrane cell adhesi yes N/A 0.434 0.118 0.222 8e-08
>sp|Q9R172|NOTC3_RAT Neurogenic locus notch homolog protein 3 OS=Rattus norvegicus GN=Notch3 PE=2 SV=2 Back     alignment and function desciption
 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 273/1091 (25%), Positives = 379/1091 (34%), Gaps = 265/1091 (24%)

Query: 45   SPCGPNSQC--REVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPG 102
            SPC    +C  ++ + +A C CLP + G              C L+  C +  CA    G
Sbjct: 48   SPCANGGRCTHQQPSREAACLCLPGWVG------------ERCQLEDPCHSGPCAG--RG 93

Query: 103  TCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYS 162
             C  +    V   S  CRC  GF G              P   +P+   PC+ SPC   +
Sbjct: 94   VCQSSVVAGVARFS--CRCLRGFRG--------------PDCSLPD---PCFSSPCAHGA 134

Query: 163  QCR-DINGSPSCSCLPSYIGSPPNCRP---ECIQNSECPYDKACINEKCADPCPGFCPPG 218
             C    +G  +C+C P Y G   NCR    EC   + C +   CIN   +  C   CP G
Sbjct: 135  PCSVGSDGRYACACPPGYQGR--NCRSDIDECRAGASCRHGGTCINTPGSFHC--LCPLG 190

Query: 219  TTGSPFVQCK-PIVHEPVYTNPCQPSPCGPNSQCREVNHQAV-CSCLPNYFGSPPACRPE 276
             TG   + C+ PIV       PC PSPC     CR+ +     C+CLP + G        
Sbjct: 191  YTG---LLCENPIV-------PCAPSPCRNGGTCRQSSDVTYDCACLPGFEGQ------N 234

Query: 277  CTVN-SDCPLDKSCQNQKCADPC--------------------------PGTCGQNANCK 309
            C VN  DCP  +      C D                            P  C     C 
Sbjct: 235  CEVNVDDCPGHRCLNGGTCVDGVNTYNCQCPPEWTGQFCTEDVDECQLQPNACHNGGTCF 294

Query: 310  VINHSPICRCKAGFTGDP----------------FTYCNRIPLQYL---MPNNAPMNVPP 350
             +     C C  G+TG+                  T  +R+   Y    M     +    
Sbjct: 295  NLLGGHSCVCVNGWTGESCSQNIDDCATAVCFHGATCHDRVASFYCACPMGKTGLLCHLD 354

Query: 351  ISAVETPVLEDTCNCAPNAVCKDEVCVCLPDFYGDGYVSCRPECVLN-NDCPSNKACI-- 407
             + V  P  ED   C  N V    +C C P F G        EC +  N C     C+  
Sbjct: 355  DACVSNPCHEDAI-CDTNPVSGRAICTCPPGFTGGACDQDVDECSIGANPCEHLGRCVNT 413

Query: 408  --KYKCK--------------NPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKP 451
               + C+              N C+SG C   A C       +C C AG TG     C+ 
Sbjct: 414  QGSFLCQCGRGYTGPRCETDVNECLSGPCRNQATCLDRIGQFTCICMAGFTG---TFCE- 469

Query: 452  VQNEPVYTNPCHPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKAC 511
                 V  + C  SPC     C++  +   C+C   + GS      +   +T C     C
Sbjct: 470  -----VDIDECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSTCQLDVDECASTPCRNGAKC 524

Query: 512  FNQ------KCVDPCPGT-CGQNAN-----------CRVINHSPICTCKPGFTG----DA 549
             +Q      +C +   GT C +N +           C     S  C C PG+TG      
Sbjct: 525  VDQPDGYECRCAEGFEGTLCERNVDDCSPDPCHHGRCVDGIASFSCACAPGYTGIRCESQ 584

Query: 550  LAYCNRIP--LSNYVFEKILIQLMYC-PGTTGNPFVLCKLVQNEPVYTNPCQPSPCGPNS 606
            +  C   P        + +   L  C PGTTG   V C+      V  + C  +PC    
Sbjct: 585  VDECRSQPCRYGGKCLDLVDKYLCRCPPGTTG---VNCE------VNIDDCASNPC-TFG 634

Query: 607  QCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDP-------CPDSP 659
             CR+  ++  C C P + G  P C  E       P  +      CVD        CP   
Sbjct: 635  VCRDGINRYDCVCQPGFTG--PLCNVEINECASSPCGEG---GSCVDGENGFHCLCPPGS 689

Query: 660  PPPLESPPEYVNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCR----PECVMNSE 715
             PPL  P  +  PC   PC  +  C D  G   C C P + G  P C     P+   +  
Sbjct: 690  LPPLCLPANH--PCAHKPC-SHGVCHDAPGGFQCVCDPGWSG--PRCSQSLAPDACESQP 744

Query: 716  CPSNEACINEKCGDPCPGSCGYNA-ECKIINHTPICTCPDGFI----GDPFTSCSPKPPE 770
            C +   C ++  G  C  + G+   +C++++      C  G       D  T CS  PP 
Sbjct: 745  CQAGGTCTSDGIGFHCTCAPGFQGHQCEVLSPCTPSLCEHGGHCESDPDQLTVCS-CPPG 803

Query: 771  PVQPVIQEDTCNCVPNAECR-DGVCVCLPDYY----GDGYVSCGPECILNNDCPSNKACI 825
               P  Q+D   C   + C   G C  LP  +      GY   GP C  + D      C+
Sbjct: 804  WQGPRCQQDVDECAGASPCGPHGTCTNLPGSFRCICHGGYT--GPFCDQDIDDCDPNPCL 861

Query: 826  RNKFNKQAV----CSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNA 881
                 +  V    CSCL  + G      P C  + D      C++  C    PG+C  + 
Sbjct: 862  NGGSCQDGVGSFSCSCLSGFAG------PRCARDVD-----ECLSSPCG---PGTCTDHV 907

Query: 882  NCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDING 941
                   +  C C PG+ G     C          D+ +    C PS C     C D   
Sbjct: 908  A------SFTCTCPPGYGG---FHCET--------DLLD----CSPSSCFNGGTCVDGVN 946

Query: 942  SPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGS-CGYNALCKVINHSP 1000
            S SC C P + G            + C +         +DPC    C +  +C   +   
Sbjct: 947  SFSCLCRPGYTG------------THCQYK--------VDPCFSRPCLHGGICNPTHSGF 986

Query: 1001 ICTCPDGFVGD 1011
             CTC +GF G+
Sbjct: 987  ECTCREGFTGN 997
Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs (By similarity). Acts instructively to control the cell fate determination of CNS multipotent progenitor cells, resulting in astroglial induction and neuron/oligodendrocyte suppression.
Rattus norvegicus (taxid: 10116)
>sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2 PE=1 SV=3 Back     alignment and function description
>sp|Q9UM47|NOTC3_HUMAN Neurogenic locus notch homolog protein 3 OS=Homo sapiens GN=NOTCH3 PE=1 SV=2 Back     alignment and function description
>sp|P10079|FBP1_STRPU Fibropellin-1 OS=Strongylocentrotus purpuratus GN=EGF1 PE=1 SV=2 Back     alignment and function description
>sp|Q9QW30|NOTC2_RAT Neurogenic locus notch homolog protein 2 OS=Rattus norvegicus GN=Notch2 PE=1 SV=1 Back     alignment and function description
>sp|P46530|NOTC1_DANRE Neurogenic locus notch homolog protein 1 OS=Danio rerio GN=notch1a PE=2 SV=1 Back     alignment and function description
>sp|Q01705|NOTC1_MOUSE Neurogenic locus notch homolog protein 1 OS=Mus musculus GN=Notch1 PE=1 SV=3 Back     alignment and function description
>sp|Q99466|NOTC4_HUMAN Neurogenic locus notch homolog protein 4 OS=Homo sapiens GN=NOTCH4 PE=1 SV=2 Back     alignment and function description
>sp|P46531|NOTC1_HUMAN Neurogenic locus notch homolog protein 1 OS=Homo sapiens GN=NOTCH1 PE=1 SV=4 Back     alignment and function description
>sp|P34576|MUA3_CAEEL Transmembrane cell adhesion receptor mua-3 OS=Caenorhabditis elegans GN=mua-3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1031
170059510 6860 dumpy [Culex quinquefasciatus] gi|167878 0.955 0.143 0.509 0.0
270013391 21117 hypothetical protein TcasGA2_TC011986 [T 0.895 0.043 0.532 0.0
157133857 5429 hypothetical protein AaeL_AAEL012905 [Ae 0.894 0.169 0.497 0.0
170059512 2048 conserved hypothetical protein [Culex qu 0.928 0.467 0.489 0.0
442625918 20404 dumpy, isoform V [Drosophila melanogaste 0.928 0.046 0.476 0.0
442625920 18014 dumpy, isoform W [Drosophila melanogaste 0.928 0.053 0.475 0.0
442625928 19560 dumpy, isoform AA [Drosophila melanogast 0.928 0.048 0.475 0.0
442625916 21657 dumpy, isoform U [Drosophila melanogaste 0.928 0.044 0.475 0.0
442625910 22830 dumpy, isoform R [Drosophila melanogaste 0.928 0.041 0.475 0.0
442625914 22300 dumpy, isoform T [Drosophila melanogaste 0.928 0.042 0.475 0.0
>gi|170059510|ref|XP_001865394.1| dumpy [Culex quinquefasciatus] gi|167878260|gb|EDS41643.1| dumpy [Culex quinquefasciatus] Back     alignment and taxonomy information
 Score =  976 bits (2524), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/1141 (50%), Positives = 719/1141 (63%), Gaps = 156/1141 (13%)

Query: 7    KINTYEVFYSCPPGTTGSPFVQCKPIVHEPVY--TNPCQPSPCGPNSQCREVNHQAVCSC 64
            ++ ++     C  G TG PF QC  +  +     ++PC PSPCG N+ CRE N    C+C
Sbjct: 2233 RVVSHTPMCICSVGYTGDPFSQCTLVQQDVPREPSSPCMPSPCGANAICREQNGAGSCTC 2292

Query: 65   LPNYFGSP-PACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKA 123
            + ++ G+P   CRPEC +NSDCP D++C   KC DPCPGTCGQNA+C+V+NH P C C +
Sbjct: 2293 MDDHIGNPYEGCRPECVLNSDCPSDRACIRSKCQDPCPGTCGQNADCQVVNHLPSCTCIS 2352

Query: 124  GFTGDPFTYCNRIPPPPPPQED--VPEPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 181
            G+ GDPF +CN          D  + + VNPC PSPCGP SQCR+ING   CSCLP+YIG
Sbjct: 2353 GYEGDPFRFCNIQQREQHRGIDTSIQQYVNPCQPSPCGPNSQCREINGQAVCSCLPTYIG 2412

Query: 182  SPPNCRPECIQNSECPYDKACINEKCADPCPGFC-----------------PPGTTGSPF 224
            SPP CRPEC+ +SECP D+AC+N+KC DPCPG C                   G TG PF
Sbjct: 2413 SPPGCRPECVTSSECPLDRACVNQKCVDPCPGTCGTNARCNVNNHSPICSCQSGYTGDPF 2472

Query: 225  VQCKP-----IVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTV 279
             +C P        + V  +PC PSPCGPNSQCR +N    CSCL NY GSPP CRPECT+
Sbjct: 2473 TRCYPNPPPPQDTQVVVRDPCVPSPCGPNSQCRNINGVPSCSCLVNYIGSPPNCRPECTI 2532

Query: 280  NSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPLQYL 339
            N++CP +++C N+KC DPCPG+CG  A C VINH+PIC C++G+TGDPFT C        
Sbjct: 2533 NAECPSNQACMNEKCRDPCPGSCGIGARCNVINHTPICTCESGYTGDPFTNC-------- 2584

Query: 340  MPNNAPMNVPPISAVETPVLEDTCN---CAPNAVCKDEVCVCLPDFYGDGYVSCRPECVL 396
                     P       PV +D CN   C PNA C + +C CLP++ GD Y  CRPECVL
Sbjct: 2585 --------YPEPPPPREPVRDDPCNPSPCGPNAQCNNGICSCLPEYQGDPYQGCRPECVL 2636

Query: 397  NNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKPVQNEP 456
            N+DCP +KACI+ KC +PC  GTCG+ AIC+VINH   C+CP G  GN FV C+P Q  P
Sbjct: 2637 NSDCPRDKACIRSKCIDPC-PGTCGQDAICEVINHIPMCSCPNGMAGNAFVQCRPQQAPP 2695

Query: 457  VYTNPCHPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKC 516
            V TNPC+PSPCGPNSQCRE+N QAVCSC+P + GSPP CRPEC V+++CP ++AC NQKC
Sbjct: 2696 V-TNPCNPSPCGPNSQCREINGQAVCSCVPGFIGSPPTCRPECVVSSECPQNQACNNQKC 2754

Query: 517  VDPCPGTCGQNANCRVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGT 576
             DPCPGTCG  A C V+NH+PIC+C   FTGD    C  I  +       +  +  C   
Sbjct: 2755 RDPCPGTCGVGARCSVVNHNPICSCPERFTGDPFVRCQPIIETPVQ----MTPVNPCQPN 2810

Query: 577  TGNPFVLCKLVQNEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTV 636
               P   C+ V  EPVY NPCQP+PCGPNSQCRE+N QAVCSCLP Y GSPP CRPEC  
Sbjct: 2811 PCGPNAECRPVA-EPVYKNPCQPNPCGPNSQCREINGQAVCSCLPTYIGSPPGCRPECVT 2869

Query: 637  NTDCPLDKACFNQKCVDPCPDS---------------------------------PPPPL 663
            +++CPLD+AC NQKCVDPCP +                                 PPPP 
Sbjct: 2870 SSECPLDRACVNQKCVDPCPGTCGTNARCNVNNHSPICSCQSGYTGDPFTRCYPNPPPPQ 2929

Query: 664  ESPPEYVNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACI 723
            ++     +PC+PSPCGP SQCR+I G PSCSCL NYIG+PPNCRPEC +N+ECPSN+AC+
Sbjct: 2930 DTQVVVRDPCVPSPCGPNSQCRNINGVPSCSCLVNYIGSPPNCRPECTINAECPSNQACM 2989

Query: 724  NEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDPFTSCSPKPPEPVQPVIQEDTCN- 782
            NEKC DPCPGSCG  A C +INHTPICTC  G+ GDPFT+C P+PP P +PV ++D CN 
Sbjct: 2990 NEKCRDPCPGSCGIGARCNVINHTPICTCESGYTGDPFTNCYPEPPPPREPV-RDDPCNP 3048

Query: 783  --CVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNK------------ 828
              C PNA+C +G+C CLP+Y GD Y  C PEC+LN+DCP +KACIR+K            
Sbjct: 3049 SPCGPNAQCNNGICTCLPEYQGDPYQGCRPECVLNSDCPRDKACIRSKCIDPCPGTCGQD 3108

Query: 829  -----FNKQAVCSCLPNYFGSP-PACRPE------------------------------- 851
                  N   +CSC     G+    CRP+                               
Sbjct: 3109 AICEVINHIPMCSCPNGMAGNAFVQCRPQQAPPVTNPCNPSPCGPNSQCREINGQAVCSC 3168

Query: 852  --------------CTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPG 897
                          C V+++CP ++AC NQKC DPCPG+CG  A C V+NHN +C+C   
Sbjct: 3169 VPGFIGSPPTCRPECVVSSECPQNQACNNQKCRDPCPGTCGVGARCSVVNHNPICSCPER 3228

Query: 898  FTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPN 957
            FTG+P +RC  I    P Q  P  VNPC P+PCGPN++CR +  SPSC+CL   IG+PPN
Sbjct: 3229 FTGDPFVRCQPI-IETPVQMTP--VNPCQPNPCGPNAECRPVGDSPSCTCLDNMIGSPPN 3285

Query: 958  CRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFSGCY 1017
            CRPECI NSEC  + ACIR+KC DPC G+CG NA C+V++H+P+C C  GF GD F+ C 
Sbjct: 3286 CRPECISNSECASNLACIRQKCQDPCTGACGANAECRVVSHTPMCICSIGFTGDPFTQCL 3345

Query: 1018 P 1018
            P
Sbjct: 3346 P 3346

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|270013391|gb|EFA09839.1| hypothetical protein TcasGA2_TC011986 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|157133857|ref|XP_001663043.1| hypothetical protein AaeL_AAEL012905 [Aedes aegypti] gi|108870667|gb|EAT34892.1| AAEL012905-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|170059512|ref|XP_001865395.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167878261|gb|EDS41644.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|442625918|ref|NP_001260037.1| dumpy, isoform V [Drosophila melanogaster] gi|440213322|gb|AGB92573.1| dumpy, isoform V [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|442625920|ref|NP_001260038.1| dumpy, isoform W [Drosophila melanogaster] gi|440213323|gb|AGB92574.1| dumpy, isoform W [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|442625928|ref|NP_001260042.1| dumpy, isoform AA [Drosophila melanogaster] gi|440213327|gb|AGB92578.1| dumpy, isoform AA [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|442625916|ref|NP_001260036.1| dumpy, isoform U [Drosophila melanogaster] gi|440213321|gb|AGB92572.1| dumpy, isoform U [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|442625910|ref|NP_001260033.1| dumpy, isoform R [Drosophila melanogaster] gi|440213318|gb|AGB92569.1| dumpy, isoform R [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|442625914|ref|NP_001260035.1| dumpy, isoform T [Drosophila melanogaster] gi|440213320|gb|AGB92571.1| dumpy, isoform T [Drosophila melanogaster] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1031
FB|FBgn005319622 dp "dumpy" [Drosophila melanog 0.932 43.68 0.424 3.7e-233
ZFIN|ZDB-GENE-041001-184 8328 si:dkey-30j22.1 "si:dkey-30j22 0.843 0.104 0.248 7.4e-41
WB|WBGene00022816 2687 fbn-1 [Caenorhabditis elegans 0.824 0.316 0.237 9e-40
RGD|620761 2319 Notch3 "notch 3" [Rattus norve 0.883 0.392 0.233 1.2e-31
UNIPROTKB|Q9R172 2319 Notch3 "Neurogenic locus notch 0.883 0.392 0.233 1.2e-31
MGI|MGI:97363 2531 Notch1 "notch 1" [Mus musculus 0.796 0.324 0.248 4.8e-35
UNIPROTKB|P21783 2524 notch1 "Neurogenic locus notch 0.756 0.309 0.251 1.1e-34
RGD|3187 2531 Notch1 "notch 1" [Rattus norve 0.804 0.327 0.243 2.8e-34
UNIPROTKB|Q07008 2531 Notch1 "Neurogenic locus notch 0.804 0.327 0.243 2.8e-34
RGD|3188 2471 Notch2 "notch 2" [Rattus norve 0.861 0.359 0.241 3.8e-34
FB|FBgn0053196 dp "dumpy" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 2275 (805.9 bits), Expect = 3.7e-233, P = 3.7e-233
 Identities = 460/1084 (42%), Positives = 592/1084 (54%)

Query:     5 DTKINTYEVFYSCPPGTTGSPFVQCKPI-----VHEPVYTNPCQPSPCGPNSQCREVNHQ 59
             + ++  +     C  G TG  F +C P+     V E V  +PC PSPCG NSQCR V   
Sbjct: 12969 ECRVRNHSPLCQCRQGFTGDSFTRCYPLPPPPPVIERVERDPCLPSPCGLNSQCRNVQGV 13028

Query:    60 AVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPIC 119
               C+CLP++ G+PP CRPECT++++CP + +C  ++C DPCPG+CG  A C V+NH+PIC
Sbjct: 13029 PSCTCLPDFLGAPPNCRPECTISAECPSNLACIRERCIDPCPGSCGYAAECSVVNHTPIC 13088

Query:   120 RCKAGFTGDPFTYCNRIXXXXXXXXXXXXXXXXCYPSPCGPYSQCRDINGSPSCSCLPSY 179
              C AGFTGDPF+ C                   C PSPCGP +QC     +  C+CL  +
Sbjct: 13089 VCPAGFTGDPFSSCRP---APPPEPTQSEYVDPCNPSPCGPNAQCN----AGICTCLAEF 13141

Query:   180 IGSP-PNCRPECIQNSECPYDKACINEKCADXXXXXXXXXX-----------------XX 221
              G P   CRPEC+ NS+CP DKAC + KC +                             
Sbjct: 13142 HGDPYSGCRPECVLNSDCPRDKACHSSKCVNPCPGTCGENAICDVINHIPMCRCPERTAG 13201

Query:   222 XXXVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNS 281
                ++C P+  +   +NPC+PSPCGPNSQCREVN QAVCSCLP++ G+PP+CRPECT NS
Sbjct: 13202 SAFIRCSPV--QITVSNPCRPSPCGPNSQCREVNQQAVCSCLPSFIGAPPSCRPECTSNS 13259

Query:   282 DCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPLQYLMP 341
             +C   ++C NQ+C DPCPGTCG  ANC V++HSP C C   FTG+PF  C          
Sbjct: 13260 ECAPTQACLNQRCGDPCPGTCGVGANCAVVSHSPFCTCPERFTGNPFIRCQ--------- 13310

Query:   342 NNAPMNVPPISAVETPVLEDTCN---CAPNAVCKD----EVCVCLPDFYGDGYVSCRPEC 394
                P   PP+  V  PV  D C    C P + C+       C C+  + G    +CRPEC
Sbjct: 13311 ---PQIEPPVRDV-APV--DPCRPSPCGPYSQCRPVGEAPACSCVETYIGRP-PNCRPEC 13363

Query:   395 VLNNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKP-VQ 453
             V ++DC S  AC+  KC +PC  G CG  A C V++HAV C C  G  G+PFV CKP + 
Sbjct: 13364 VTSSDCSSQLACVNQKCVDPC-PGRCGLNAECFVVSHAVQCICQQGFNGDPFVQCKPEIA 13422

Query:   454 NEPVYTNPCHPSPCGPNSQCREVNHQAVCSCLPNYFGSP-PACRPECTVNTDCPLDKACF 512
              E     PC PSPCGPN+ CR+ N    C CLP YFG P   CRPEC +++DCP ++AC 
Sbjct: 13423 YENEIRTPCSPSPCGPNAVCRDRNGVGSCQCLPQYFGDPYEGCRPECMLDSDCPSNRACQ 13482

Query:   513 NQKCVDPCPGTCGQNANCRVINHSPICTCKPGFTGDALAYCNRIP---LSNYVFEKILIQ 569
               +C DPCPGTCG NANC+V+NH P CTC  G+ GD    CNR+P    + YV       
Sbjct: 13483 QLRCQDPCPGTCGLNANCQVVNHLPTCTCLTGYVGDPYRQCNRLPEPPQNEYVNP----- 13537

Query:   570 LMYCPGTTGNPFVLCKLVQNE-------PVY--TNP-CQPSPCGPNSQCRE----VNHQA 615
                C  T   P   C+ V NE       P++  T P C+P  C  +S+C      VN + 
Sbjct: 13538 ---CQPTPCGPNSQCR-VSNEQAVCSCLPLFVGTPPSCRPE-CTISSECSADRACVNQKC 13592

Query:   616 VCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKXXXXXXXXXXXXXXXXXXXXXXCIP 675
             V  C  +  G+   CR     +  C                                CIP
Sbjct: 13593 VDPCAADTCGNNAICRVR-NHSPICSCISGYTGDAFTRCFLIPPPIIETKDEPLRDPCIP 13651

Query:   676 SPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSC 735
             +PCGP S+CR+I G P+CSCL N+IG  PNCRPEC +NSECPS  ACIN+KC DPCPG+C
Sbjct: 13652 TPCGPNSECRNINGVPACSCLVNFIGQAPNCRPECTINSECPSQLACINQKCRDPCPGAC 13711

Query:   736 GYNAECKIINHTPICTCPDGFIGDPFTSCSPKPPEPVQPVIQEDTCN---CVPNAECRDG 792
             G NA C +INHTP+C C DG+IG+PFT+C+PKPPEP  P + +D CN   C  NA+CR+G
Sbjct: 13712 GQNAVCSVINHTPLCACIDGYIGNPFTNCNPKPPEPPAPPVADDPCNPSPCGANAQCRNG 13771

Query:   793 VCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYF----GSPPAC 848
              C C+P+Y GD YVSC PEC+LN DCP ++AC+RNK       +C  N         P C
Sbjct: 13772 QCSCIPEYKGDPYVSCRPECVLNTDCPRDRACVRNKCIDPCSGTCGVNALCEVNNHIPIC 13831

Query:   849 R-PE-CTVNT--DC-PLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEP- 902
             R PE  + N   +C P+  A +   C  P P  CG N+ CRV+   AVC+C   + G P 
Sbjct: 13832 RCPEQMSGNAFFECRPVPPAKIQNPC-QPSP--CGPNSQCRVVQQTAVCSCLANYVGSPP 13888

Query:   903 --RIRCSKIXXXXXXQDVPEYV--NPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPP-- 956
               R  C         QD       +PC P  CG N+ C  +N  P CSC PT +   P  
Sbjct: 13889 QCRPECVTNSDCPADQDCQNMKCRDPC-PGTCGFNALCNVVNHRPFCSC-PTGMSGNPFV 13946

Query:   957 NCRPECIQNSECPFDKACIREKCIDPC-PGSCGYNALCKVINHSPICTCPDGFVGDAFSG 1015
             +C+   I++           E+  +PC P  CG N+ C+V   SP C+C   FVG A   
Sbjct: 13947 SCQQLIIRD-----------ERPQNPCQPSPCGPNSECRVSGDSPSCSCLPEFVG-APPN 13994

Query:  1016 CYPK 1019
             C P+
Sbjct: 13995 CRPE 13998
GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP
GO:0005578 "proteinaceous extracellular matrix" evidence=NAS
GO:0007424 "open tracheal system development" evidence=IMP
GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA
GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA
GO:0004519 "endonuclease activity" evidence=IEA
GO:0005509 "calcium ion binding" evidence=IEA
GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=IMP
GO:0040005 "chitin-based cuticle attachment to epithelium" evidence=IMP
GO:0031012 "extracellular matrix" evidence=ISM
GO:0005201 "extracellular matrix structural constituent" evidence=ISM
GO:0046331 "lateral inhibition" evidence=IMP
ZFIN|ZDB-GENE-041001-184 si:dkey-30j22.1 "si:dkey-30j22.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00022816 fbn-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
RGD|620761 Notch3 "notch 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9R172 Notch3 "Neurogenic locus notch homolog protein 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:97363 Notch1 "notch 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|P21783 notch1 "Neurogenic locus notch protein homolog" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
RGD|3187 Notch1 "notch 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q07008 Notch1 "Neurogenic locus notch homolog protein 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|3188 Notch2 "notch 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1031
KOG4289|consensus 2531 99.73
KOG4289|consensus 2531 99.62
KOG1217|consensus487 99.58
KOG1217|consensus487 99.57
KOG1214|consensus1289 99.53
KOG1214|consensus 1289 99.47
KOG0994|consensus 1758 99.37
KOG1219|consensus 4289 99.26
KOG1219|consensus4289 99.24
KOG0994|consensus1758 99.07
KOG1225|consensus525 98.98
KOG1225|consensus525 98.91
KOG4260|consensus350 98.74
KOG4260|consensus350 98.53
KOG1226|consensus783 97.86
KOG1226|consensus783 97.78
KOG1836|consensus 1705 97.66
PF0764542 EGF_CA: Calcium-binding EGF domain; InterPro: IPR0 97.59
PF0000832 EGF: EGF-like domain This is a sub-family of the P 97.56
PF0764542 EGF_CA: Calcium-binding EGF domain; InterPro: IPR0 97.56
PF0000832 EGF: EGF-like domain This is a sub-family of the P 97.49
smart0017939 EGF_CA Calcium-binding EGF-like domain. 97.39
KOG1836|consensus1705 97.39
smart0017939 EGF_CA Calcium-binding EGF-like domain. 97.38
PF1294736 EGF_3: EGF domain; InterPro: IPR024731 This entry 97.23
PF06247197 Plasmod_Pvs28: Plasmodium ookinete surface protein 97.11
PF1294736 EGF_3: EGF domain; InterPro: IPR024731 This entry 97.04
cd0005438 EGF_CA Calcium-binding EGF-like domain, present in 96.87
cd0005438 EGF_CA Calcium-binding EGF-like domain, present in 96.87
PF06247197 Plasmod_Pvs28: Plasmodium ookinete surface protein 96.86
PF1266224 cEGF: Complement Clr-like EGF-like 95.91
cd0005336 EGF Epidermal growth factor domain, found in epide 95.88
cd0005336 EGF Epidermal growth factor domain, found in epide 95.88
smart0018135 EGF Epidermal growth factor-like domain. 95.84
smart0018135 EGF Epidermal growth factor-like domain. 95.72
PF1266224 cEGF: Complement Clr-like EGF-like 95.67
PF0797432 EGF_2: EGF-like domain; InterPro: IPR013111 A sequ 94.21
KOG1218|consensus316 94.11
PF0797432 EGF_2: EGF-like domain; InterPro: IPR013111 A sequ 93.59
PF1467036 FXa_inhibition: Coagulation Factor Xa inhibitory s 93.21
PF1266113 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E 90.83
KOG1218|consensus316 90.47
KOG3512|consensus592 90.31
PF1467036 FXa_inhibition: Coagulation Factor Xa inhibitory s 89.67
smart0005163 DSL delta serrate ligand. 87.85
smart0005163 DSL delta serrate ligand. 87.04
PF1294637 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 84.77
KOG3512|consensus 592 82.38
PF1294637 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 81.68
>KOG4289|consensus Back     alignment and domain information 
Probab=99.73  E-value=4.7e-17  Score=192.78  Aligned_cols=91  Identities=33%  Similarity=0.859  Sum_probs=78.5

Q ss_pred             ccCCCce-eeCCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCC
Q psy13144          8 INTYEVF-YSCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCP   86 (1031)
Q Consensus         8 ~~~~~~~-C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~   86 (1031)
                      |++...+ |+|||||+|+.   |+      +.||+|-+.||++||+|....|+|+|.|.+||+|.      .|+...   
T Consensus      1216 i~pvnglrCrCPpGFTgd~---Ce------TeiDlCYs~pC~nng~C~srEggYtCeCrpg~tGe------hCEvs~--- 1277 (2531)
T KOG4289|consen 1216 IHPVNGLRCRCPPGFTGDY---CE------TEIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGE------HCEVSA--- 1277 (2531)
T ss_pred             ccccCceeEeCCCCCCccc---cc------chhHhhhcCCCCCCCceEEecCceeEEecCCcccc------ceeeec---
Confidence            4666777 99999999994   98      78999999999999999999999999999999998      787643   


Q ss_pred             CCccccCCCCCCCCCCCCCCCCeeeec-CCCceeeCCCC
Q psy13144         87 LDKSCQNQKCADPCPGTCGQNANCKVI-NHSPICRCKAG  124 (1031)
Q Consensus        87 ~~~~C~~~~C~~~c~~~C~~~~~C~~~-~g~~~C~C~~G  124 (1031)
                           ..++|.   ++.|.++|+|++. .|+|.|+|+.|
T Consensus      1278 -----~agrCv---pGvC~nggtC~~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1278 -----RAGRCV---PGVCKNGGTCVNLLNGGFCCHCPYG 1308 (2531)
T ss_pred             -----ccCccc---cceecCCCEEeecCCCceeccCCCc
Confidence                 134454   5789999999995 68999999998

>KOG4289|consensus Back     alignment and domain information
>KOG1217|consensus Back     alignment and domain information
>KOG1217|consensus Back     alignment and domain information
>KOG1214|consensus Back     alignment and domain information
>KOG1214|consensus Back     alignment and domain information
>KOG0994|consensus Back     alignment and domain information
>KOG1219|consensus Back     alignment and domain information
>KOG1219|consensus Back     alignment and domain information
>KOG0994|consensus Back     alignment and domain information
>KOG1225|consensus Back     alignment and domain information
>KOG1225|consensus Back     alignment and domain information
>KOG4260|consensus Back     alignment and domain information
>KOG4260|consensus Back     alignment and domain information
>KOG1226|consensus Back     alignment and domain information
>KOG1226|consensus Back     alignment and domain information
>KOG1836|consensus Back     alignment and domain information
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins Back     alignment and domain information
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins Back     alignment and domain information
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins Back     alignment and domain information
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins Back     alignment and domain information
>smart00179 EGF_CA Calcium-binding EGF-like domain Back     alignment and domain information
>KOG1836|consensus Back     alignment and domain information
>smart00179 EGF_CA Calcium-binding EGF-like domain Back     alignment and domain information
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins Back     alignment and domain information
>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium Back     alignment and domain information
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins Back     alignment and domain information
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins Back     alignment and domain information
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins Back     alignment and domain information
>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium Back     alignment and domain information
>PF12662 cEGF: Complement Clr-like EGF-like Back     alignment and domain information
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium Back     alignment and domain information
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium Back     alignment and domain information
>smart00181 EGF Epidermal growth factor-like domain Back     alignment and domain information
>smart00181 EGF Epidermal growth factor-like domain Back     alignment and domain information
>PF12662 cEGF: Complement Clr-like EGF-like Back     alignment and domain information
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins Back     alignment and domain information
>KOG1218|consensus Back     alignment and domain information
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins Back     alignment and domain information
>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A Back     alignment and domain information
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A Back     alignment and domain information
>KOG1218|consensus Back     alignment and domain information
>KOG3512|consensus Back     alignment and domain information
>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A Back     alignment and domain information
>smart00051 DSL delta serrate ligand Back     alignment and domain information
>smart00051 DSL delta serrate ligand Back     alignment and domain information
>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein Back     alignment and domain information
>KOG3512|consensus Back     alignment and domain information
>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1031
1oig_A24 The Solution Structure Of The Dpy Module From The D 8e-04
>pdb|1OIG|A Chain A, The Solution Structure Of The Dpy Module From The Dumpy Protein Length = 24 Back     alignment and structure 
Iteration: 1

 Score = 43.1 bits (100), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/24 (75%), Positives = 23/24 (95%)
Query: 707 RPECVMNSECPSNEACINEKCGDP 730
           RPECV+NS+CPSN+AC+N+KC DP
Sbjct: 1   RPECVLNSDCPSNQACVNQKCRDP 24

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1031
3k6s_B687 Integrin beta-2; cell receptor, adhesion molecule, 3e-06
3k6s_B687 Integrin beta-2; cell receptor, adhesion molecule, 8e-05
3k6s_B687 Integrin beta-2; cell receptor, adhesion molecule, 7e-04
1z1y_A186 Ookinete surface protein PVS25; four EGF-like doma 5e-04
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 Back     alignment and structure
 Score = 50.5 bits (120), Expect = 3e-06
 Identities = 52/382 (13%), Positives = 69/382 (18%), Gaps = 56/382 (14%)

Query: 103 TCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYS 162
               NA    +  +    C  G T       +           +   V           S
Sbjct: 346 FLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDC--DGVQINVPITFQVKVTATECIQEQS 403

Query: 163 QCRDINGSPSCSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGS 222
                 G      +         CR +    S C          C       C  G  G 
Sbjct: 404 FVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICR------CDTGYIGK 457

Query: 223 PFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSD 282
                            C+                  C C  +           C     
Sbjct: 458 NCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYC----- 512

Query: 283 CPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPLQYLMPN 342
                 C    C       CG             CRC  GF G     C          N
Sbjct: 513 -----ECDTINCERYNGQVCGGPGRGLCFCGK--CRCHPGFEGS---ACQCERTTEGCLN 562

Query: 343 NAPMNVPPISAVETPVLEDTCNCAPNAVCKDEVCVCLPDFYGDG---YVSCRPECVLNND 399
                                 C+    C+  VC C   +          C   C     
Sbjct: 563 P-----------------RRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYIS 605

Query: 400 CPSNKACIK--------YKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGN--PFVLC 449
           C       K          C    +S    +G  C   +   S  C    T      +  
Sbjct: 606 CAECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCKERD---SEGCWVAYTLEQQDGMDR 662

Query: 450 KPVQNEPVYTNPCHPSPCGPNS 471
             +  +        P  CG N 
Sbjct: 663 YLIYVDESRECVAGPDGCGENL 684
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 Back     alignment and structure
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 Back     alignment and structure
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1031
4fbr_A267 Lectin, myxobacterial hemagglutinin; beta-barrel, 99.79
1z1y_A186 Ookinete surface protein PVS25; four EGF-like doma 99.78
4fbr_A267 Lectin, myxobacterial hemagglutinin; beta-barrel, 99.76
2vj3_A135 Neurogenic locus notch homolog protein 1; transcri 99.76
1z1y_A186 Ookinete surface protein PVS25; four EGF-like doma 99.75
2vj3_A135 Neurogenic locus notch homolog protein 1; transcri 99.75
4d90_A143 EGF-like repeat and discoidin I-like domain-conta 99.69
2ygq_A324 WIF-1, WNT inhibitory factor 1; signaling protein, 99.68
4d90_A143 EGF-like repeat and discoidin I-like domain-conta 99.68
2ygq_A324 WIF-1, WNT inhibitory factor 1; signaling protein, 99.67
2vj2_A169 Jagged-1; signalling, polymorphism, glycoprotein, 99.64
2bou_A143 EGF-like module containing mucin-like hormone rece 99.59
2vj2_A169 Jagged-1; signalling, polymorphism, glycoprotein, 99.59
1yo8_A634 Thrombospondin-2; EGF, Ca(2+)-binding domains, lec 99.56
1uzk_A162 Fibrillin-1; glycoprotein, extra-cellular matrix, 99.54
1yo8_A 634 Thrombospondin-2; EGF, Ca(2+)-binding domains, lec 99.54
2bou_A143 EGF-like module containing mucin-like hormone rece 99.53
3fcs_B690 Integrin beta-3; beta propeller, rossmann fold, EG 99.5
3fcs_B690 Integrin beta-3; beta propeller, rossmann fold, EG 99.48
1uzk_A162 Fibrillin-1; glycoprotein, extra-cellular matrix, 99.47
1dx5_I118 Thrombomodulin; serine proteinase, EGF-like domain 99.47
2w86_A147 Fibrillin-1, fibrillin1; phosphoprotein, EGF-like 99.35
1dx5_I118 Thrombomodulin; serine proteinase, EGF-like domain 99.33
2w86_A147 Fibrillin-1, fibrillin1; phosphoprotein, EGF-like 99.24
2gy5_A423 Angiopoietin-1 receptor; ligand-binding domain, tr 99.22
3k6s_B687 Integrin beta-2; cell receptor, adhesion molecule, 99.18
3k6s_B687 Integrin beta-2; cell receptor, adhesion molecule, 99.16
2gy5_A423 Angiopoietin-1 receptor; ligand-binding domain, tr 99.15
1emn_A82 Fibrillin; extracellular matrix, calcium-binding, 99.15
1emn_A82 Fibrillin; extracellular matrix, calcium-binding, 99.13
1tpg_A91 T-plasminogen activator F1-G; plasminogen activati 99.12
1tpg_A91 T-plasminogen activator F1-G; plasminogen activati 99.12
1lmj_A86 Fibrillin 1; EGF, calcium, microfibril, neonatal, 99.1
1lmj_A86 Fibrillin 1; EGF, calcium, microfibril, neonatal, 99.08
1aut_L114 Activated protein C; serine proteinase, plasma cal 99.07
1z6c_A87 Vitamin K-dependent protein S; EGF module, blood c 98.98
4aqs_A525 Laminin subunit beta-1; cell adhesion; HET: NAG BM 98.97
4aqs_A525 Laminin subunit beta-1; cell adhesion; HET: NAG BM 98.96
1x7a_L146 Coagulation factor IX, light chain; inhibition, bl 98.95
1aut_L114 Activated protein C; serine proteinase, plasma cal 98.95
1x7a_L146 Coagulation factor IX, light chain; inhibition, bl 98.91
1nfu_B195 Coagulation factor XA, light chain; hydrolase; HET 98.89
1z6c_A87 Vitamin K-dependent protein S; EGF module, blood c 98.88
2c4f_L142 Coagulation factor VII precursor; blood coagulatio 98.81
2vh0_B134 Activated factor XA light chain; serine protease, 98.8
2c4f_L142 Coagulation factor VII precursor; blood coagulatio 98.79
2w2n_E107 LDL receptor, low-density lipoprotein receptor; hy 98.78
1nfu_B195 Coagulation factor XA, light chain; hydrolase; HET 98.75
2vh0_B134 Activated factor XA light chain; serine protease, 98.74
2w2n_E107 LDL receptor, low-density lipoprotein receptor; hy 98.71
3h5c_B317 Vitamin K-dependent protein Z; protein Z-protein Z 98.65
1n7d_A 699 LDL receptor, low-density lipoprotein receptor; fa 98.64
1klo_A162 Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: 98.61
3h5c_B 317 Vitamin K-dependent protein Z; protein Z-protein Z 98.57
1klo_A162 Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: 98.56
3m0c_C 791 LDL receptor, low-density lipoprotein receptor; pr 98.51
3m0c_C 791 LDL receptor, low-density lipoprotein receptor; pr 98.49
1n7d_A699 LDL receptor, low-density lipoprotein receptor; fa 98.49
2p28_B217 Integrin beta-2; hybrid domain, PSI domain, I-EGF 98.26
1edm_B39 Factor IX; epidermal growth factor, EGF, calcium- 98.25
2p28_B217 Integrin beta-2; hybrid domain, PSI domain, I-EGF 98.25
1edm_B39 Factor IX; epidermal growth factor, EGF, calcium- 98.18
3p5b_L400 Low density lipoprotein receptor variant; B-propel 98.16
3u7u_G55 Neuregulin 1; signaling protein, transferase-trans 98.15
3p5b_L 400 Low density lipoprotein receptor variant; B-propel 98.13
3u7u_G55 Neuregulin 1; signaling protein, transferase-trans 98.1
3v65_B386 Low-density lipoprotein receptor-related protein; 98.07
3v65_B 386 Low-density lipoprotein receptor-related protein; 97.95
2k2s_B61 Micronemal protein 6; microneme protein complex, c 97.91
1egf_A53 Epidermal growth factor; NMR {Mus musculus} SCOP: 97.8
2k2s_B61 Micronemal protein 6; microneme protein complex, c 97.78
1egf_A53 Epidermal growth factor; NMR {Mus musculus} SCOP: 97.75
1a3p_A45 Epidermal growth factor; disulfide connectivities, 97.63
1a3p_A45 Epidermal growth factor; disulfide connectivities, 97.56
1k36_A46 Epiregulin; EGF-like fold, hormone/growth factor c 97.53
1hae_A63 Heregulin-alpha; growth factor; NMR {Homo sapiens} 97.42
1k36_A46 Epiregulin; EGF-like fold, hormone/growth factor c 97.38
2wg3_C463 Hedgehog-interacting protein; lipoprotein, develop 97.32
2wg3_C463 Hedgehog-interacting protein; lipoprotein, develop 97.27
1hae_A63 Heregulin-alpha; growth factor; NMR {Homo sapiens} 97.25
3zyj_B426 Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA 97.19
3ca7_A52 Protein spitz; argos, EGF, developmental protein, 97.15
3ca7_A52 Protein spitz; argos, EGF, developmental protein, 97.01
1apq_A53 Complement protease C1R; EGF, calcium binding, ser 96.94
2kl7_A71 Fibulin-4; secreted, calcium, disease mutation, di 96.82
3zyj_B426 Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA 96.8
1apq_A53 Complement protease C1R; EGF, calcium binding, ser 96.78
2kl7_A71 Fibulin-4; secreted, calcium, disease mutation, di 96.76
1ob1_C99 Major merozoite surface protein; immune system, im 96.69
2jkh_L55 Factor X light chain; plasma, calcium, zymogen, se 96.53
1gl4_A 285 Nidogen-1, entactin; immunoglobulin-like domain, e 96.49
1n1i_A105 Merozoite surface protein-1; MSP1, malaria, surfac 96.47
1nql_B53 Epidermal growth factor; cell surface receptor, ty 96.46
1nql_B53 Epidermal growth factor; cell surface receptor, ty 96.46
2jkh_L55 Factor X light chain; plasma, calcium, zymogen, se 96.46
1kli_L69 Factor VIIA; extrinsic coagulation pathway, serine 96.35
1ob1_C99 Major merozoite surface protein; immune system, im 96.25
1kli_L69 Factor VIIA; extrinsic coagulation pathway, serine 96.22
1gl4_A285 Nidogen-1, entactin; immunoglobulin-like domain, e 95.95
1g1s_A162 P-selectin; selectin, lectin, EGF, sulphated, SLEX 95.62
1g1s_A162 P-selectin; selectin, lectin, EGF, sulphated, SLEX 95.59
2fd6_A122 Urokinase-type plasminogen activator; UPAR, ATF, A 95.55
1n1i_A105 Merozoite surface protein-1; MSP1, malaria, surfac 95.51
1kig_L51 Factor XA; glycoprotein, serine protease, plasma, 95.14
1kig_L51 Factor XA; glycoprotein, serine protease, plasma, 95.11
2fd6_A122 Urokinase-type plasminogen activator; UPAR, ATF, A 94.79
3ltf_D58 Protein spitz; receptor-ligand complex ectodomain 94.53
3ltf_D58 Protein spitz; receptor-ligand complex ectodomain 94.22
2bz6_L53 Blood coagulation factor VIIA; serine protease, en 94.06
2bz6_L53 Blood coagulation factor VIIA; serine protease, en 93.95
1q4g_A553 Prostaglandin G/H synthase 1; cyclooxygenase, non- 93.61
3nt1_A587 Prostaglandin-endoperoxide synthase 2; prostagland 93.47
1q4g_A553 Prostaglandin G/H synthase 1; cyclooxygenase, non- 93.22
3nt1_A 587 Prostaglandin-endoperoxide synthase 2; prostagland 93.17
3cfw_A164 L-selectin; EGF, cell adhesion, EGF-like domain, g 92.55
1szb_A170 Mannose binding lectin-associated serine protease- 91.72
2y38_A403 Laminin subunit alpha-5; structural protein, cell 91.59
4aqt_A375 Laminin subunit gamma-1; cell adhesion; HET: NAG B 91.57
2wph_E59 Coagulation factor IXA light chain; serine proteas 91.3
3cfw_A164 L-selectin; EGF, cell adhesion, EGF-like domain, g 90.87
1oig_A26 Dumpy, CG33196-PB; structural protein; NMR {Drosop 90.85
4aqt_A375 Laminin subunit gamma-1; cell adhesion; HET: NAG B 90.74
1g1t_A157 E-selectin; EGF, adhesion molecule, SLEX, immune s 89.98
2wph_E59 Coagulation factor IXA light chain; serine proteas 88.78
2y38_A403 Laminin subunit alpha-5; structural protein, cell 88.57
2rnl_A50 Amphiregulin; AR, colorectum cell-derived growth f 88.35
1szb_A170 Mannose binding lectin-associated serine protease- 88.34
3e50_C50 Protransforming growth factor alpha; IDE, TGF-alph 87.95
1xdt_R79 Hbegf, heparin-binding epidermal growth factor; co 87.63
1xdt_R79 Hbegf, heparin-binding epidermal growth factor; co 87.11
1iox_A50 Betacellulin; EGF-like fold, hormone/growth factor 87.1
2i9a_A145 Urokinase-type plasminogen activator; growth facto 87.05
3e50_C50 Protransforming growth factor alpha; IDE, TGF-alph 86.99
1g1t_A157 E-selectin; EGF, adhesion molecule, SLEX, immune s 86.87
1iox_A50 Betacellulin; EGF-like fold, hormone/growth factor 86.33
2rnl_A50 Amphiregulin; AR, colorectum cell-derived growth f 84.41
1oig_A26 Dumpy, CG33196-PB; structural protein; NMR {Drosop 84.22
2p26_A280 Integrin beta-2; hybrid domain, PSI domain, I-EGF 83.61
2ygo_A188 WIF-1, WNT inhibitory factor 1; signaling protein, 82.06
3asi_A410 Neurexin-1-alpha; beta-sandwich, cell adhesion, sy 81.04
2i9a_A145 Urokinase-type plasminogen activator; growth facto 80.83
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A* Back     alignment and structure
Probab=99.79  E-value=6.8e-23  Score=215.92  Aligned_cols=219  Identities=10%  Similarity=-0.056  Sum_probs=154.5

Q ss_pred             CCCCCCCeeeecCCceeeeCCCCcccCCCCCcCcCccCCCCCCCCcccCCccCCCCCCCCCCCCCCCCCcCCc------C
Q psy13144        600 SPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVNP------C  673 (1031)
Q Consensus       600 ~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~~~~~~~~~dide------C  673 (1031)
                      .+|.++++|++..++|+|+|++||+|.      +|+                                ++|++      |
T Consensus        38 ~~c~ngG~C~~g~~~y~C~Cp~Gf~G~------~Ce--------------------------------~ni~ec~~~~~c   79 (267)
T 4fbr_A           38 IKSDDGGKTLKGTMTYNGEGPIGFRGT------LSS--------------------------------ANNYTVENQWGG   79 (267)
T ss_dssp             EECSSTTSEEEEEEEETTSCCEEEEEE------ECS--------------------------------TTEEEEEEESSS
T ss_pred             CCcCCCCeecCCCCCeEEeCCCCcccc------ccc--------------------------------ccccccccccCc
Confidence            378899999999999999999999999      566                                34666      6


Q ss_pred             CCCCCCCCCceeecCCCCeeecCCCCcCCCCCCCcCcccCCCCCCccccccCcCCCCCCCCCCCCCeeeccCCCceeeCC
Q psy13144        674 IPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCP  753 (1031)
Q Consensus       674 ~~~~C~~~g~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~  753 (1031)
                      .+.||.++++|              |.|.  +|+.    +++|.+.              +|.++|+|++...+|+|+|+
T Consensus        80 ~s~pC~nggtc--------------~~G~--~c~~----~~eC~s~--------------pC~ngG~C~~~~~sy~C~C~  125 (267)
T 4fbr_A           80 TSAPWQPGGVW--------------VLGA--RDKQ----NIVAVSI--------------KSNDGGKTLTGTTTYNGEGP  125 (267)
T ss_dssp             TTSCEEEEEEE--------------ECCC--CSSC----CEEEEEE--------------ECSSTTSEEEEEEEETTSCC
T ss_pred             CCCcccCCCee--------------eccC--cccc----ccccCCC--------------CCCCCCEEecCCccEEeeCC
Confidence            66777776655              3444  5542    4455543              57888999999999999999


Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcc---CCCCCCCCCCeeeCceeecCCCCccCCcccCCCCCcCCCCCCCCCccccCCCC
Q psy13144        754 DGFIGDPFTSCSPKPPEPVQPVIQ---EDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFN  830 (1031)
Q Consensus       754 ~G~~g~~~~~C~~~~~~~~~~~~~---~~~c~C~~~~~C~~~~C~C~~G~~G~~c~~~~~~C~~~~~C~~~g~C~~~~~~  830 (1031)
                      .||+|.   .|+....+    +..   ....+|++.++|          |.|.+++..++.+  ..+|.++|+|++..  
T Consensus       126 ~Gf~G~---~Ce~~~d~----C~n~~~c~s~pC~ngg~c----------~~G~~c~~~i~c~--~~~c~ngg~C~dg~--  184 (267)
T 4fbr_A          126 IGFKSE---VTDGDTYS----VENQWGGSAAPWHSGGVW----------VLGTRGKQNVINV--DAKSNDGGKTLSGT--  184 (267)
T ss_dssp             EEEEEE---ECCCCEEE----EEEECSSTTSCCEEEEEE----------ECCSSTTSCEEEE--EEECSSTTSEEEEE--
T ss_pred             CCcccc---CCCCCccc----ccccCCcCCccccCCcce----------ecccccccccccC--CCCCCCCCEeeCCC--
Confidence            999998   57643211    000   011134443333          4577776655433  26899999999976  


Q ss_pred             CceeeecCCCCcCCCCCCCCCcccCCCCCCcccccCCcccCCCCCCCCCCCceeecCCCeeeEeCCCCccCCCccccCCC
Q psy13144        831 KQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIP  910 (1031)
Q Consensus       831 ~~~~C~C~~G~~g~g~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~  910 (1031)
                      ++|+|.|++||+|.      .|+.+++     +|.+.        .....+.|.+. +.+.+.|..||.+.   .|+   
T Consensus       185 ~~y~C~Cp~Gf~G~------~c~~~i~-----ec~~~--------~~c~~~~c~~g-G~~~~~C~~g~n~~---~c~---  238 (267)
T 4fbr_A          185 MTYNGEGPIGFRGT------LTSPDTY-----TVENQ--------WGGSTAPWNPG-GFWMIGARNGQNVV---ALN---  238 (267)
T ss_dssp             EEETTSCCEEEEEE------EEETTEE-----EEEEE--------CSCTTSCCEEE-EEEECCCCTTCCEE---EEE---
T ss_pred             CCeEEeCCCCcccc------ccccccc-----eeccC--------CCccCCcccCC-CeEEEecCCCCccc---cCC---
Confidence            89999999999999      7877654     33221        11223444443 44677788888766   342   


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCCCCceeecCCCceeeCCCCCcCC
Q psy13144        911 PPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGA  954 (1031)
Q Consensus       911 ~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~  954 (1031)
                                       .||.++++|++..++|+|+||+||+|.
T Consensus       239 -----------------~~c~ngGtC~dg~~sy~CeCp~GF~G~  265 (267)
T 4fbr_A          239 -----------------VASSDGGKTLAGTMIYNGEGPIGFRAR  265 (267)
T ss_dssp             -----------------EECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred             -----------------cCCCCCCEeeCCCcceeecCCCCcccc
Confidence                             378999999999999999999999985
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Back     alignment and structure
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A* Back     alignment and structure
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Back     alignment and structure
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Back     alignment and structure
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Back     alignment and structure
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Back     alignment and structure
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Back     alignment and structure
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Back     alignment and structure
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Back     alignment and structure
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Back     alignment and structure
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Back     alignment and structure
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Back     alignment and structure
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Back     alignment and structure
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Back     alignment and structure
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Back     alignment and structure
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Back     alignment and structure
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Back     alignment and structure
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Back     alignment and structure
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Back     alignment and structure
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Back     alignment and structure
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Back     alignment and structure
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Back     alignment and structure
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Back     alignment and structure
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Back     alignment and structure
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Back     alignment and structure
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Back     alignment and structure
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Back     alignment and structure
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Back     alignment and structure
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Back     alignment and structure
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Back     alignment and structure
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Back     alignment and structure
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Back     alignment and structure
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Back     alignment and structure
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Back     alignment and structure
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Back     alignment and structure
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Back     alignment and structure
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Back     alignment and structure
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Back     alignment and structure
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Back     alignment and structure
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Back     alignment and structure
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Back     alignment and structure
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Back     alignment and structure
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Back     alignment and structure
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Back     alignment and structure
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Back     alignment and structure
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Back     alignment and structure
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Back     alignment and structure
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Back     alignment and structure
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Back     alignment and structure
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Back     alignment and structure
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Back     alignment and structure
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Back     alignment and structure
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Back     alignment and structure
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Back     alignment and structure
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} Back     alignment and structure
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} Back     alignment and structure
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Back     alignment and structure
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A Back     alignment and structure
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Back     alignment and structure
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A Back     alignment and structure
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Back     alignment and structure
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Back     alignment and structure
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens} Back     alignment and structure
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Back     alignment and structure
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens} Back     alignment and structure
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Back     alignment and structure
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Back     alignment and structure
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A Back     alignment and structure
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A Back     alignment and structure
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A Back     alignment and structure
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A Back     alignment and structure
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1 Back     alignment and structure
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1 Back     alignment and structure
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A Back     alignment and structure
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A Back     alignment and structure
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A Back     alignment and structure
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Back     alignment and structure
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Back     alignment and structure
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A Back     alignment and structure
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Back     alignment and structure
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D Back     alignment and structure
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D Back     alignment and structure
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Back     alignment and structure
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens} Back     alignment and structure
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Back     alignment and structure
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Back     alignment and structure
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens} Back     alignment and structure
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A Back     alignment and structure
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... Back     alignment and structure
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A Back     alignment and structure
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4 Back     alignment and structure
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C* Back     alignment and structure
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C* Back     alignment and structure
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ... Back     alignment and structure
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L* Back     alignment and structure
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A Back     alignment and structure
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L* Back     alignment and structure
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A Back     alignment and structure
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A Back     alignment and structure
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A Back     alignment and structure
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A Back     alignment and structure
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4 Back     alignment and structure
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 Back     alignment and structure
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1 Back     alignment and structure
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A Back     alignment and structure
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster} Back     alignment and structure
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster} Back     alignment and structure
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L* Back     alignment and structure
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L* Back     alignment and structure
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Back     alignment and structure
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ... Back     alignment and structure
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Back     alignment and structure
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ... Back     alignment and structure
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Back     alignment and structure
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Back     alignment and structure
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Back     alignment and structure
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B* Back     alignment and structure
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Back     alignment and structure
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A Back     alignment and structure
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B* Back     alignment and structure
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Back     alignment and structure
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens} Back     alignment and structure
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Back     alignment and structure
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A Back     alignment and structure
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1 Back     alignment and structure
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1 Back     alignment and structure
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A Back     alignment and structure
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A* Back     alignment and structure
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A Back     alignment and structure
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A Back     alignment and structure
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A Back     alignment and structure
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens} Back     alignment and structure
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A* Back     alignment and structure
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A* Back     alignment and structure
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Back     alignment and structure
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1031
d1edmb_39 Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 98.55
d1edmb_39 Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 98.51
d2vj3a142 Neurogenic locus notch homolog protein 1, Notch1 { 98.5
d2c4fl137 Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} 98.5
d2c4fl137 Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} 98.49
d2vj3a239 Neurogenic locus notch homolog protein 1, Notch1 { 98.49
d2vj3a142 Neurogenic locus notch homolog protein 1, Notch1 { 98.47
d2vj3a239 Neurogenic locus notch homolog protein 1, Notch1 { 98.44
d2vj3a335 Neurogenic locus notch homolog protein 1, Notch1 { 98.33
d1emoa143 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 98.3
d1xkba139 Factor X, N-terminal module {Human (Homo sapiens) 98.29
d2vj3a335 Neurogenic locus notch homolog protein 1, Notch1 { 98.29
d1emoa143 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 98.27
d1xkba139 Factor X, N-terminal module {Human (Homo sapiens) 98.26
d1g1ta239 E-selectin, EGF-domain {Human (Homo sapiens) [TaxI 98.09
d1g1sa240 E-selectin, EGF-domain {Human (Homo sapiens) [TaxI 98.04
d1autl148 Activated protein c (autoprothrombin IIa) {Human ( 98.04
d1g1ta239 E-selectin, EGF-domain {Human (Homo sapiens) [TaxI 97.92
d1uzka143 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 97.92
d1g1sa240 E-selectin, EGF-domain {Human (Homo sapiens) [TaxI 97.89
d1lmja144 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 97.89
d1lmja144 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 97.89
d1q4ga242 Prostaglandin H2 synthase-1, EGF-like module {Shee 97.87
d1tpga141 Plasminogen activator (tissue-type), t-PA {Human ( 97.84
d1uzka143 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 97.83
d1q4ga242 Prostaglandin H2 synthase-1, EGF-like module {Shee 97.83
d1autl148 Activated protein c (autoprothrombin IIa) {Human ( 97.81
d1tpga141 Plasminogen activator (tissue-type), t-PA {Human ( 97.76
d1lmja242 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 97.75
d1gl4a240 EGF-like domain of nidogen-1 {Mouse (Mus musculus) 97.67
d1cvua241 Prostaglandin H2 synthase-1, EGF-like module {Mous 97.67
d1cvua241 Prostaglandin H2 synthase-1, EGF-like module {Mous 97.66
d1lmja242 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 97.59
d1gl4a240 EGF-like domain of nidogen-1 {Mouse (Mus musculus) 97.59
d1uzka243 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 97.58
d1apqa_53 Complement protease C1R {Human (Homo sapiens) [Tax 97.54
d1apqa_53 Complement protease C1R {Human (Homo sapiens) [Tax 97.49
d1dx5i340 Thrombomodulin, different EGF-like domains {Human 97.35
d1uzka243 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 97.35
d1dx5i340 Thrombomodulin, different EGF-like domains {Human 97.35
d1szba245 Mannose-binding protein associated serine protease 97.26
d1i0ua241 Low density lipoprotein (LDL) receptor, different 97.26
d1nt0a345 Mannose-binding protein associated serine protease 97.22
d1haea_63 Heregulin-alpha, EGF-like domain {Human (Homo sapi 97.13
d1i0ua241 Low density lipoprotein (LDL) receptor, different 97.0
d1haea_63 Heregulin-alpha, EGF-like domain {Human (Homo sapi 96.97
d1szba245 Mannose-binding protein associated serine protease 96.88
d3egfa_53 Epidermal growth factor, EGF {Mouse (Mus musculus) 96.82
d1nt0a345 Mannose-binding protein associated serine protease 96.79
d3egfa_53 Epidermal growth factor, EGF {Mouse (Mus musculus) 96.63
d1nqlb_48 Epidermal growth factor, EGF {Human (Homo sapiens) 96.59
d1nqlb_48 Epidermal growth factor, EGF {Human (Homo sapiens) 96.48
d3bpse140 Low density lipoprotein (LDL) receptor, different 96.35
d1nzia242 Complement C1S component {Human (Homo sapiens) [Ta 96.33
d3bpse140 Low density lipoprotein (LDL) receptor, different 96.0
d1emoa239 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 95.96
d1nzia242 Complement C1S component {Human (Homo sapiens) [Ta 95.55
d1emoa239 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 95.47
d1kigl_51 Factor X, N-terminal module {Cow (Bos taurus) [Tax 93.57
d2i9aa140 Plasminogen activator (urokinase-type) {Human (Hom 93.31
d1autl250 Activated protein c (autoprothrombin IIa) {Human ( 92.74
d2i9aa140 Plasminogen activator (urokinase-type) {Human (Hom 92.33
d1k36a_46 Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI 91.77
d1k36a_46 Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI 91.7
d2p3ua151 Factor X, N-terminal module {Human (Homo sapiens) 91.4
d1kigl_51 Factor X, N-terminal module {Cow (Bos taurus) [Tax 91.19
d1ioxa_50 Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606] 90.59
d1l3ya_41 Integrin beta EGF-like domains {Human (Homo sapien 90.53
d1autl250 Activated protein c (autoprothrombin IIa) {Human ( 90.02
d1ioxa_50 Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606] 89.95
d1moxc_49 Transforming growth factor alpha {Human (Homo sapi 89.5
d1ijqa250 Low density lipoprotein (LDL) receptor, different 88.81
d1moxc_49 Transforming growth factor alpha {Human (Homo sapi 88.59
d2p3ua151 Factor X, N-terminal module {Human (Homo sapiens) 88.12
d1kloa155 Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 85.49
d1jv2b431 Integrin beta EGF-like domains {Human (Homo sapien 84.79
d1jv2b431 Integrin beta EGF-like domains {Human (Homo sapien 83.45
d1jv2b543 Integrin beta EGF-like domains {Human (Homo sapien 82.95
d1l3ya_41 Integrin beta EGF-like domains {Human (Homo sapien 80.9
d1ijqa250 Low density lipoprotein (LDL) receptor, different 80.01
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=2.7e-08  Score=70.71  Aligned_cols=34  Identities=21%  Similarity=0.567  Sum_probs=33.1

Q ss_pred             CCCCCCCCCCCCCCeecccCCceeeeCCCCCcCC
Q psy13144         38 YTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGS   71 (1031)
Q Consensus        38 ~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~   71 (1031)
                      |+|+|.++||.++|+|++..++|+|.|++||+|.
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~   35 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGK   35 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCCCC
Confidence            7899999999999999999999999999999998
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure