Psyllid ID: psy13200

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
Protein Sequence
MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKYLSDNSSY
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MGEAANQKINNAVMKIMVDIDKQFLRKMQADMhrcsvkccenkdATMEGVQECLEVCSAPFMRAQKYLQMEFEQYQTRLQRCVLDCNDeikdkmgvnpkqsdmdAYTRQFESCAEKCVDKHIALLPTLFQKIKKYLSDNSSY
Flexible Loop (DISEMBL)
mgeaanqkinnaVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDkmgvnpkqsdmDAYTRQFESCAEKCVDKHIALLPTLFQKIkkylsdnssy
Low Complexity Region (SEG)
MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKYLSDNSSY
Disordered region (IsUnstruct)
*********NNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKD************AYTRQFESCAEKCVDKHIALLPTLFQKIKKYL******
Disordered Region (DISOPRED)
**********NAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQKYLQMEFEQYQTRLQRCVLDCN*********************QFESCAEKCVDKHIALLPTLFQKIKK*LS*****
Disordered Region (DISEMBL)
MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKYLSDNSSY
Disordered Region (DISPRO)
*****NQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKYLSD****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKYLSDNSSY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	142	2.2.26 [Sep-21-2011]
B0BN94	138	Protein FAM136A OS=Rattus	yes	N/A	0.943	0.971	0.408	7e-26
Q9CR98	138	Protein FAM136A OS=Mus mu	yes	N/A	0.943	0.971	0.401	2e-25
Q2HJI3	138	Protein FAM136A OS=Bos ta	yes	N/A	0.943	0.971	0.394	2e-24
Q6PBU0	138	Protein FAM136A OS=Danio	yes	N/A	0.943	0.971	0.364	2e-23
Q63ZH8	138	Protein FAM136A OS=Xenopu	N/A	N/A	0.943	0.971	0.357	3e-23
Q96C01	138	Protein FAM136A OS=Homo s	yes	N/A	0.936	0.963	0.375	3e-23
A4QNC6	138	Protein FAM136A OS=Xenopu	yes	N/A	0.943	0.971	0.357	4e-23
P30629	143	Uncharacterized protein Z	yes	N/A	0.929	0.923	0.355	8e-19

>sp|B0BN94|F136A_RAT Protein FAM136A OS=Rattus norvegicus GN=Fam136a PE=2 SV=1

 Score =  115 bits (289), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 84/137 (61%), Gaps = 3/137 (2%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E    ++  AV  ++  ++++ +RKMQ  M RCS  CCE+  A+M+ V +C+E C AP
Sbjct: 1   MAEVQQLRVQEAVDAMVKSVERENIRKMQGLMFRCSANCCEDNQASMQQVHQCIERCHAP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             +AQ  +  E E++Q RL RC + CND+ KD M    K+  +    RQ +SC  KCVD 
Sbjct: 61  LAQAQALVTSELERFQDRLARCTMHCNDKAKDSMDAGSKELQV---KRQLDSCVAKCVDD 117

Query: 121 HIALLPTLFQKIKKYLS 137
           H+ L+PT+ +KIK+ LS
Sbjct: 118 HMHLIPTMTKKIKESLS 134

Rattus norvegicus (taxid: 10116)

>sp|Q9CR98|F136A_MOUSE Protein FAM136A OS=Mus musculus GN=Fam136a PE=1 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 84/137 (61%), Gaps = 3/137 (2%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E    ++  AV  ++  ++++ +RKMQ  M RCS  CCE+  A+M+ V +C+E C AP
Sbjct: 1   MAEVQQLRVQEAVDAMVKSVERENIRKMQGLMFRCSANCCEDTQASMQQVHQCIERCHAP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             +AQ  +  E E++Q RL RC + CND+ KD M    K+  +    RQ +SC  KCVD 
Sbjct: 61  LAQAQALVTSELERFQDRLARCTMHCNDKAKDSMDAGTKELQVK---RQLDSCVTKCVDD 117

Query: 121 HIALLPTLFQKIKKYLS 137
           H+ L+PT+ +K+K+ LS
Sbjct: 118 HMHLIPTMTKKMKESLS 134

Mus musculus (taxid: 10090)

>sp|Q2HJI3|F136A_BOVIN Protein FAM136A OS=Bos taurus GN=FAM136A PE=2 SV=1

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 83/137 (60%), Gaps = 3/137 (2%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E    ++  AV  ++  ++++ +RKMQ  M RCS  CCE   A+M+ V +C+E C AP
Sbjct: 1   MAELQQLRVQEAVDSMVKSLERENIRKMQGLMFRCSAACCEESQASMQQVHQCIERCHAP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             +AQ  +  E E++Q RL RC + CND+ KD +    K+  +    RQ E+C  KCVD 
Sbjct: 61  LAQAQALVTSELEKFQDRLARCTMYCNDKAKDSIDAGSKELHVK---RQLETCVTKCVDD 117

Query: 121 HIALLPTLFQKIKKYLS 137
           H+ L+PT+ +K+K+ LS
Sbjct: 118 HMNLIPTMTRKMKESLS 134

Bos taurus (taxid: 9913)

>sp|Q6PBU0|F136A_DANRE Protein FAM136A OS=Danio rerio GN=fam136a PE=2 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 82/137 (59%), Gaps = 3/137 (2%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M EA   ++ NAV +++ +++K+ +RKMQ  M RCS +CCE+   +M  V +C+E C  P
Sbjct: 1   MAEAQQARVQNAVEEMVQNLEKEHIRKMQGRMFRCSAECCEHPGNSMNQVHQCIERCHTP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             +AQ  +  E EQ+Q RL RC + C+D+ KD      K+  + A     + C   CVD+
Sbjct: 61  LAKAQGLVTSELEQFQDRLSRCTMHCSDKAKDLFDSGAKEPAVRAL---MDGCVGSCVDE 117

Query: 121 HIALLPTLFQKIKKYLS 137
           H+ LLP++ +++K  L+
Sbjct: 118 HLNLLPSMTRRLKDSLN 134

Danio rerio (taxid: 7955)

>sp|Q63ZH8|F136A_XENLA Protein FAM136A OS=Xenopus laevis GN=fam136a PE=2 SV=1

 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 82/137 (59%), Gaps = 3/137 (2%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E    ++ NAV  ++  +++  +RKMQ  M RCS +CCE+  A+M+ V  C+E C  P
Sbjct: 1   MAEEHQNRLQNAVDSMVKSLERDNIRKMQGKMFRCSAQCCEDNGASMQQVHHCIERCHTP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             +AQ  +  E E++Q RL RC ++C+D+ KD      K++ + A   Q E C  KC ++
Sbjct: 61  LAQAQSLVTTELERFQNRLSRCTMNCSDQAKDAFDSGSKEAQVKA---QLEGCVIKCAEE 117

Query: 121 HIALLPTLFQKIKKYLS 137
           H+ L+P++ +K+K  L+
Sbjct: 118 HMNLIPSMTKKLKDALA 134

Xenopus laevis (taxid: 8355)

>sp|Q96C01|F136A_HUMAN Protein FAM136A OS=Homo sapiens GN=FAM136A PE=1 SV=1

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 3/136 (2%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E    ++  AV  ++  ++++ +RKMQ  M RCS  CCE+  A+M+ V +C+E C  P
Sbjct: 1   MAELQQLRVQEAVESMVKSLERENIRKMQGLMFRCSASCCEDSQASMKQVHQCIERCHVP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             +AQ  +  E E++Q RL RC + CND+ KD +    K+  +    +Q +SC  KCVD 
Sbjct: 61  LAQAQALVTSELEKFQDRLARCTMHCNDKAKDSIDAGSKELQV---KQQLDSCVTKCVDD 117

Query: 121 HIALLPTLFQKIKKYL 136
           H+ L+PT+ +K+K+ L
Sbjct: 118 HMHLIPTMTKKMKEAL 133

Homo sapiens (taxid: 9606)

>sp|A4QNC6|F136A_XENTR Protein FAM136A OS=Xenopus tropicalis GN=fam136a PE=2 SV=1

 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 81/137 (59%), Gaps = 3/137 (2%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E    ++ NA+  ++  +++  +RKMQ  M RCS +CCE+  A+M+ V  C+E C  P
Sbjct: 1   MAEEQQNRLQNAIDTMVKSLERDNIRKMQGKMFRCSAQCCEDNGASMQQVHHCIERCHTP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             +AQ  +  E E++Q RL RC + CND+ KD      K++ + A   Q E C  KC ++
Sbjct: 61  LAQAQSLVTNELERFQNRLARCTMHCNDKAKDSFDSGSKEAQVKA---QLEGCVIKCAEE 117

Query: 121 HIALLPTLFQKIKKYLS 137
           H+ L+P++ +K+K  L+
Sbjct: 118 HMNLIPSMTKKLKDALA 134

Xenopus tropicalis (taxid: 8364)

>sp|P30629|YOU2_CAEEL Uncharacterized protein ZK637.2 OS=Caenorhabditis elegans GN=ZK637.2 PE=3 SV=2

 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 77/135 (57%), Gaps = 3/135 (2%)

Query: 3   EAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFM 62
           EA   K+  AV +++ D+DK +LR MQ  M +CS +CC+NK  T + V+ C+E C+    
Sbjct: 7   EATQMKVKLAVDEMIDDLDKTYLRDMQKSMFQCSARCCDNKKTTRDAVENCVESCNDGMK 66

Query: 63  RAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMG--VNP-KQSDMDAYTRQFESCAEKCVD 119
           +AQ YL+ E    Q +L RC + C D++  + G  VN   +S   ++  + +SC   C D
Sbjct: 67  KAQGYLEKELGGLQDQLSRCAMTCYDKLVQQFGPDVNKYSESQKLSFNEKLDSCVSVCAD 126

Query: 120 KHIALLPTLFQKIKK 134
            HI L+P + ++  K
Sbjct: 127 DHIKLIPAIKKRFAK 141

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
118787348	142	AGAP005979-PA [Anopheles gambiae str. PE	0.992	0.992	0.496	3e-36
170051056	141	conserved hypothetical protein [Culex qu	0.964	0.971	0.496	2e-35
312383528	141	hypothetical protein AND_24576 [Anophele	0.992	1.0	0.489	5e-35
332018377	141	Protein FAM136A [Acromyrmex echinatior]	0.964	0.971	0.489	1e-34
307197631	142	Protein FAM136A [Harpegnathos saltator]	0.978	0.978	0.482	5e-34
156545127	142	PREDICTED: protein FAM136A-like [Nasonia	0.964	0.964	0.489	1e-33
157116037	139	hypothetical protein AaeL_AAEL007414 [Ae	0.971	0.992	0.463	6e-33
194754591	146	GF11974 [Drosophila ananassae] gi|190620	0.964	0.938	0.467	2e-32
195027984	146	GH20300 [Drosophila grimshawi] gi|193902	0.922	0.897	0.465	2e-32
195379987	146	GJ21219 [Drosophila virilis] gi|19414354	0.964	0.938	0.459	5e-32

>gi|118787348|ref|XP_316022.3| AGAP005979-PA [Anopheles gambiae str. PEST] gi|116126755|gb|EAA11271.4| AGAP005979-PA [Anopheles gambiae str. PEST]

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 70/141 (49%), Positives = 99/141 (70%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E   Q+I   + K + D+D+  LRKMQADMH C+ +CC++  ++M+ VQ+C+E CS P
Sbjct: 1   MIEQQKQRIELEITKQLDDLDRNVLRKMQADMHDCAARCCKDSVSSMDTVQQCVERCSVP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             RAQ++++ E   + +RLQRCV+DCND IKDKMG NP + D+  YT +FE CA KCVDK
Sbjct: 61  AQRAQQHVETEINSFNSRLQRCVMDCNDTIKDKMGPNPSEGDIAKYTAEFERCAIKCVDK 120

Query: 121 HIALLPTLFQKIKKYLSDNSS 141
           H+A+LP +F  ++K L   SS
Sbjct: 121 HVAILPNMFASMRKVLQSRSS 141

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170051056|ref|XP_001861591.1| conserved hypothetical protein [Culex quinquefasciatus] gi|170073203|ref|XP_001870329.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167869714|gb|EDS33097.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167872468|gb|EDS35851.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 68/137 (49%), Positives = 96/137 (70%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E   Q+I   + + + D+D+  LRKMQA+MH C+ +CC +  ++M+ VQ C+E CS P
Sbjct: 1   MVEQQKQRIELELSQRVDDLDRTILRKMQAEMHECAARCCHDSGSSMDAVQRCVESCSGP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
            MRAQ++++ E   +  RLQRCV+DCND IKDKMG NP +SD+  YT  FE CA KCVDK
Sbjct: 61  VMRAQQHVEKELGGFNNRLQRCVMDCNDTIKDKMGANPSESDISKYTGMFERCAIKCVDK 120

Query: 121 HIALLPTLFQKIKKYLS 137
           H+ LLP LF+ I++ ++
Sbjct: 121 HVDLLPGLFKSIQQTIA 137

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312383528|gb|EFR28583.1| hypothetical protein AND_24576 [Anopheles darlingi]

 Score =  152 bits (384), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 69/141 (48%), Positives = 97/141 (68%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E   Q+I   + K + D+D+  LRKMQADMH C+ KCC++  ++M+ VQ+C+E CS P
Sbjct: 1   MIEQQKQRIEMEITKQLDDLDRTVLRKMQADMHDCAAKCCKDMTSSMDTVQQCVERCSVP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             RAQ++++ E   +  RLQRCV+DCND IKDKMG NP + ++  YT +FE CA KCVDK
Sbjct: 61  AQRAQQHVETEMNSFNNRLQRCVMDCNDSIKDKMGPNPSEGEIAKYTAEFERCAIKCVDK 120

Query: 121 HIALLPTLFQKIKKYLSDNSS 141
           H+ +LP +F  ++K L   SS
Sbjct: 121 HVEILPNMFASMRKVLQRRSS 141

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018377|gb|EGI58974.1| Protein FAM136A [Acromyrmex echinatior]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 67/137 (48%), Positives = 101/137 (73%)

Query: 3   EAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFM 62
           E   +++ + + K++ +IDK +LRKMQ DMH+C+ +CCEN+  +++ V  C+E CS+   
Sbjct: 2   EEQRKRVEDHMTKMVEEIDKMYLRKMQRDMHKCAAQCCENESYSIQKVHTCVENCSSSLN 61

Query: 63  RAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHI 122
           +AQ+Y+Q EFE+ Q RLQRC+++CND IKDKMG NP Q+++D Y+ +FE CA KCVD + 
Sbjct: 62  KAQQYVQGEFERVQNRLQRCIMECNDNIKDKMGPNPTQTEVDRYSEEFEKCATKCVDSYC 121

Query: 123 ALLPTLFQKIKKYLSDN 139
            LLP+L + +KK LS N
Sbjct: 122 ELLPSLEKTMKKILSKN 138

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307197631|gb|EFN78810.1| Protein FAM136A [Harpegnathos saltator]

 Score =  149 bits (375), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 67/139 (48%), Positives = 100/139 (71%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E   +++ + + +I+ +IDK  LRKMQ DMH+C+  CCEN+  +++ V  C+E CS  
Sbjct: 1   MVEQQKKRVEDHMTRIVEEIDKSILRKMQRDMHKCAASCCENETYSVQKVHNCVENCSTS 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             +AQ+Y+Q EF++ Q RLQRCV++CND+IKDK+G NP Q+++D Y+ +FE CA KCVD 
Sbjct: 61  LHKAQQYVQGEFDRVQNRLQRCVMECNDKIKDKVGPNPTQAEVDKYSEEFEKCATKCVDS 120

Query: 121 HIALLPTLFQKIKKYLSDN 139
           +  LLP+L + +KK LS N
Sbjct: 121 YCELLPSLEKTMKKVLSKN 139

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156545127|ref|XP_001602358.1| PREDICTED: protein FAM136A-like [Nasonia vitripennis]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/137 (48%), Positives = 97/137 (70%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E   +++ + + K++ +IDK +LRKMQ DMHRC+  CC+N+  +++ V  C+E C AP
Sbjct: 1   MVEEQRRRVEDQMTKMVEEIDKTYLRKMQGDMHRCAAACCDNQTYSVQKVHSCVENCGAP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             +AQ+Y+Q EFE+ Q RLQRCV++CND+IKD MG NP QS++D ++  FE CA KCVD 
Sbjct: 61  LNKAQQYVQGEFERVQNRLQRCVMECNDKIKDHMGPNPTQSEVDKFSADFEKCATKCVDT 120

Query: 121 HIALLPTLFQKIKKYLS 137
           +  LLP L + +KK L 
Sbjct: 121 YCDLLPALEKTMKKVLG 137

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157116037|ref|XP_001658351.1| hypothetical protein AaeL_AAEL007414 [Aedes aegypti] gi|108876651|gb|EAT40876.1| AAEL007414-PA [Aedes aegypti]

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 64/138 (46%), Positives = 91/138 (65%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M E   Q+I   + + + ++D+  LRKMQ +MH C+ +CC + +A+M+ VQ C+E CS P
Sbjct: 1   MVEQQKQRIELELSRRVDELDRTILRKMQGEMHECAARCCRDSNASMDSVQRCIEACSTP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             RAQ++++ E   +  RLQRCV+DCND IKDKMG  P   D+  YT  FE CA KCVDK
Sbjct: 61  VQRAQQHVETELGNFNNRLQRCVMDCNDSIKDKMGPKPSDEDISKYTSMFERCAIKCVDK 120

Query: 121 HIALLPTLFQKIKKYLSD 138
           H+ LLP LF+ + + L +
Sbjct: 121 HVDLLPGLFKSMHQVLGN 138

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194754591|ref|XP_001959578.1| GF11974 [Drosophila ananassae] gi|190620876|gb|EDV36400.1| GF11974 [Drosophila ananassae]

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 64/137 (46%), Positives = 97/137 (70%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M +   Q+I +AV +++ D+DK  LRKMQ +MH C+ KCC++  ++++ VQ C++ CSAP
Sbjct: 1   MIQQQRQRIESAVTEMIDDMDKTHLRKMQNEMHLCAAKCCQDGTSSVDSVQRCVDRCSAP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             RAQ Y+Q E  ++Q RLQRCV+ CND++K KM  NP +  +  YT QFE CA +CVDK
Sbjct: 61  MTRAQNYVQHELGEFQGRLQRCVMQCNDDVKVKMPANPNEDQIAKYTDQFERCAIQCVDK 120

Query: 121 HIALLPTLFQKIKKYLS 137
           H+ L+P++ + +K+ LS
Sbjct: 121 HVGLIPSMMKTMKQVLS 137

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195027984|ref|XP_001986862.1| GH20300 [Drosophila grimshawi] gi|193902862|gb|EDW01729.1| GH20300 [Drosophila grimshawi]

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 95/131 (72%)

Query: 7   QKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQK 66
           Q++++AV +++ D+DK  LRKMQ +MH C+ KCC++ +++++ VQ C++ CS P   A  
Sbjct: 7   QRVSSAVTELIEDMDKSHLRKMQTEMHLCAAKCCQDGNSSVDSVQRCVDRCSTPMTNANN 66

Query: 67  YLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLP 126
           Y+Q E  ++Q RLQRCV+ CND++K KM  NPK+ ++  YT QFE CA KCVDKH+ L+P
Sbjct: 67  YVQHELGEFQGRLQRCVMQCNDDVKVKMPPNPKEEEIAKYTDQFERCAIKCVDKHVGLIP 126

Query: 127 TLFQKIKKYLS 137
           +L + +K  L+
Sbjct: 127 SLMKTMKSVLA 137

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195379987|ref|XP_002048752.1| GJ21219 [Drosophila virilis] gi|194143549|gb|EDW59945.1| GJ21219 [Drosophila virilis]

 Score =  142 bits (358), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 63/137 (45%), Positives = 94/137 (68%)

Query: 1   MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
           M +   Q++ +AV +++ D+DK  LRKMQ +MH C+ KCC++  ++++ VQ C++ CSAP
Sbjct: 1   MIQQQRQRVESAVTELIDDMDKTHLRKMQTEMHLCAAKCCQDGTSSVDSVQRCVDRCSAP 60

Query: 61  FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
             RAQ Y+Q E  ++Q RLQRCV+ CND++K KM   P +  +  YT QFE CA +CVDK
Sbjct: 61  MTRAQNYVQHELGEFQGRLQRCVMQCNDDVKVKMPATPNEDQIAKYTDQFERCAIQCVDK 120

Query: 121 HIALLPTLFQKIKKYLS 137
           H+ L+P L + +K  LS
Sbjct: 121 HVGLIPNLMKTMKSVLS 137

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
RGD|1304825	138	Fam136a "family with sequence	0.943	0.971	0.408	7.3e-27
MGI|MGI:1913738	138	Fam136a "family with sequence	0.943	0.971	0.401	1.9e-26
UNIPROTKB|F1SLD2	138	FAM136A "Uncharacterized prote	0.943	0.971	0.401	6.6e-26
UNIPROTKB|Q2HJI3	138	FAM136A "Protein FAM136A" [Bos	0.943	0.971	0.394	1.8e-25
UNIPROTKB|Q96C01	138	FAM136A "Protein FAM136A" [Hom	0.936	0.963	0.375	9.7e-25
ZFIN|ZDB-GENE-040426-2729	138	fam136a "family with sequence	0.943	0.971	0.364	8.7e-24
UNIPROTKB|F1NYT8	145	FAM136A "Uncharacterized prote	0.943	0.924	0.343	5.5e-22
WB|WBGene00014022	143	ZK637.2 [Caenorhabditis elegan	0.929	0.923	0.355	7e-22
TAIR|locus:2828428	149	AT2G31725 "AT2G31725" [Arabido	0.859	0.818	0.251	5.8e-11
TAIR|locus:2044019	147	AT2G43720 "AT2G43720" [Arabido	0.880	0.850	0.261	1.2e-10

RGD|1304825 Fam136a "family with sequence similarity 136, member A" [Rattus norvegicus (taxid:10116)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 56/137 (40%), Positives = 84/137 (61%)

Query:     1 MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
             M E    ++  AV  ++  ++++ +RKMQ  M RCS  CCE+  A+M+ V +C+E C AP
Sbjct:     1 MAEVQQLRVQEAVDAMVKSVERENIRKMQGLMFRCSANCCEDNQASMQQVHQCIERCHAP 60

Query:    61 FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
               +AQ  +  E E++Q RL RC + CND+ KD M    K+  +    RQ +SC  KCVD 
Sbjct:    61 LAQAQALVTSELERFQDRLARCTMHCNDKAKDSMDAGSKELQVK---RQLDSCVAKCVDD 117

Query:   121 HIALLPTLFQKIKKYLS 137
             H+ L+PT+ +KIK+ LS
Sbjct:   118 HMHLIPTMTKKIKESLS 134

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

MGI|MGI:1913738 Fam136a "family with sequence similarity 136, member A" [Mus musculus (taxid:10090)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 55/137 (40%), Positives = 84/137 (61%)

Query:     1 MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
             M E    ++  AV  ++  ++++ +RKMQ  M RCS  CCE+  A+M+ V +C+E C AP
Sbjct:     1 MAEVQQLRVQEAVDAMVKSVERENIRKMQGLMFRCSANCCEDTQASMQQVHQCIERCHAP 60

Query:    61 FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
               +AQ  +  E E++Q RL RC + CND+ KD M    K+  +    RQ +SC  KCVD 
Sbjct:    61 LAQAQALVTSELERFQDRLARCTMHCNDKAKDSMDAGTKELQVK---RQLDSCVTKCVDD 117

Query:   121 HIALLPTLFQKIKKYLS 137
             H+ L+PT+ +K+K+ LS
Sbjct:   118 HMHLIPTMTKKMKESLS 134

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1SLD2 FAM136A "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 55/137 (40%), Positives = 84/137 (61%)

Query:     1 MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
             M E    ++  AV  ++ +++++ +RKMQ  M RCS  CCE+  A+M+ V +C+E C AP
Sbjct:     1 MAELQQLRVQEAVDSMVKNLERENIRKMQGLMFRCSAGCCEDSQASMQQVHQCIERCHAP 60

Query:    61 FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
               +AQ  +  E E++Q RL RC L CND+ KD +    K+  +    RQ E C  KCVD 
Sbjct:    61 LAQAQALVTSELEKFQDRLARCTLHCNDKAKDSIDAGSKELQVK---RQLECCVTKCVDD 117

Query:   121 HIALLPTLFQKIKKYLS 137
             H+ L+PT+ +K+K+ LS
Sbjct:   118 HMNLIPTMTKKMKESLS 134

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q2HJI3 FAM136A "Protein FAM136A" [Bos taurus (taxid:9913)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 54/137 (39%), Positives = 83/137 (60%)

Query:     1 MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
             M E    ++  AV  ++  ++++ +RKMQ  M RCS  CCE   A+M+ V +C+E C AP
Sbjct:     1 MAELQQLRVQEAVDSMVKSLERENIRKMQGLMFRCSAACCEESQASMQQVHQCIERCHAP 60

Query:    61 FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
               +AQ  +  E E++Q RL RC + CND+ KD +    K+  +    RQ E+C  KCVD 
Sbjct:    61 LAQAQALVTSELEKFQDRLARCTMYCNDKAKDSIDAGSKELHVK---RQLETCVTKCVDD 117

Query:   121 HIALLPTLFQKIKKYLS 137
             H+ L+PT+ +K+K+ LS
Sbjct:   118 HMNLIPTMTRKMKESLS 134

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q96C01 FAM136A "Protein FAM136A" [Homo sapiens (taxid:9606)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 51/136 (37%), Positives = 82/136 (60%)

Query:     1 MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
             M E    ++  AV  ++  ++++ +RKMQ  M RCS  CCE+  A+M+ V +C+E C  P
Sbjct:     1 MAELQQLRVQEAVESMVKSLERENIRKMQGLMFRCSASCCEDSQASMKQVHQCIERCHVP 60

Query:    61 FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
               +AQ  +  E E++Q RL RC + CND+ KD +    K+  +    +Q +SC  KCVD 
Sbjct:    61 LAQAQALVTSELEKFQDRLARCTMHCNDKAKDSIDAGSKELQVK---QQLDSCVTKCVDD 117

Query:   121 HIALLPTLFQKIKKYL 136
             H+ L+PT+ +K+K+ L
Sbjct:   118 HMHLIPTMTKKMKEAL 133

GO:0005739 "mitochondrion" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

ZFIN|ZDB-GENE-040426-2729 fam136a "family with sequence similarity 136, member A" [Danio rerio (taxid:7955)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 50/137 (36%), Positives = 82/137 (59%)

Query:     1 MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
             M EA   ++ NAV +++ +++K+ +RKMQ  M RCS +CCE+   +M  V +C+E C  P
Sbjct:     1 MAEAQQARVQNAVEEMVQNLEKEHIRKMQGRMFRCSAECCEHPGNSMNQVHQCIERCHTP 60

Query:    61 FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
               +AQ  +  E EQ+Q RL RC + C+D+ KD      K+  + A     + C   CVD+
Sbjct:    61 LAKAQGLVTSELEQFQDRLSRCTMHCSDKAKDLFDSGAKEPAVRAL---MDGCVGSCVDE 117

Query:   121 HIALLPTLFQKIKKYLS 137
             H+ LLP++ +++K  L+
Sbjct:   118 HLNLLPSMTRRLKDSLN 134

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1NYT8 FAM136A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 47/137 (34%), Positives = 82/137 (59%)

Query:     1 MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAP 60
             M EAA  ++  AV  ++ ++++  +R MQA M  CS +CCE++ A+M+ VQ C+E C AP
Sbjct:     8 MAEAAQGRVQEAVESVVQELERDSIRGMQATMFHCSARCCEDRAASMQQVQRCIERCHAP 67

Query:    61 FMRAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDK 120
               +AQ  +  E E++Q RL RC L C+D  KD +     ++   +   Q ++C   C D+
Sbjct:    68 LAQAQAIVTGELERFQDRLSRCTLHCSDRAKDALEAGGGETRARS---QLDACVAACGDE 124

Query:   121 HIALLPTLFQKIKKYLS 137
             H+ L+P + ++++  L+
Sbjct:   125 HLRLVPGMAKRMRDGLA 141

GO:0005737 "cytoplasm" evidence=IEA

WB|WBGene00014022 ZK637.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 48/135 (35%), Positives = 77/135 (57%)

Query:     3 EAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFM 62
             EA   K+  AV +++ D+DK +LR MQ  M +CS +CC+NK  T + V+ C+E C+    
Sbjct:     7 EATQMKVKLAVDEMIDDLDKTYLRDMQKSMFQCSARCCDNKKTTRDAVENCVESCNDGMK 66

Query:    63 RAQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMG--VNP-KQSDMDAYTRQFESCAEKCVD 119
             +AQ YL+ E    Q +L RC + C D++  + G  VN   +S   ++  + +SC   C D
Sbjct:    67 KAQGYLEKELGGLQDQLSRCAMTCYDKLVQQFGPDVNKYSESQKLSFNEKLDSCVSVCAD 126

Query:   120 KHIALLPTLFQKIKK 134
              HI L+P + ++  K
Sbjct:   127 DHIKLIPAIKKRFAK 141

GO:0055120 "striated muscle dense body" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

TAIR|locus:2828428 AT2G31725 "AT2G31725" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 32/127 (25%), Positives = 63/127 (49%)

Query:     7 QKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQK 66
             +++N A    +  I       +Q    +C+ +C + +    E +  C+E CS P +++Q+
Sbjct:    21 EEVNVAAQTQLSPIQDHINFTLQQAYFKCAYECFDRR-RKQEEISNCVEHCSVPVVKSQQ 79

Query:    67 YLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLP 126
             Y + E  Q+Q RL R ++ C    +DK   +  Q        + ESC  K +++++  LP
Sbjct:    80 YFENEMAQFQERLNRSLVVC----QDKFEASKLQKIRPEAVNEMESCVHKSIEENLNTLP 135

Query:   127 TLFQKIK 133
              + Q++K
Sbjct:   136 HIVQRMK 142

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2044019 AT2G43720 "AT2G43720" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 34/130 (26%), Positives = 58/130 (44%)

Query:     8 KINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQKY 67
             ++++A   ++  +       +Q    +C+ +C + +  T   +  C E CS P   AQ Y
Sbjct:    20 EVSSASQSLLSPVQDHINFTLQKAYFKCAYECFD-RTRTHAEISRCAESCSVPITNAQNY 78

Query:    68 LQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPT 127
                E   +Q RL R ++ C    +DK  V  +Q          E C  + VD+ +  LP 
Sbjct:    79 FDNEMSVFQERLNRSLVVC----QDKFEVAKQQKTRSEAVNDLEHCVNQTVDEAVKTLPN 134

Query:   128 LFQKIKKYLS 137
             L  ++KK LS
Sbjct:   135 LVSRMKKALS 144

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B0BN94	F136A_RAT	No assigned EC number	0.4087	0.9436	0.9710	yes	N/A
Q2HJI3	F136A_BOVIN	No assigned EC number	0.3941	0.9436	0.9710	yes	N/A
Q6PBU0	F136A_DANRE	No assigned EC number	0.3649	0.9436	0.9710	yes	N/A
A4QNC6	F136A_XENTR	No assigned EC number	0.3576	0.9436	0.9710	yes	N/A
P30629	YOU2_CAEEL	No assigned EC number	0.3555	0.9295	0.9230	yes	N/A
Q96C01	F136A_HUMAN	No assigned EC number	0.375	0.9366	0.9637	yes	N/A
Q9CR98	F136A_MOUSE	No assigned EC number	0.4014	0.9436	0.9710	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	142
pfam05811	131	pfam05811, DUF842, Eukaryotic protein of unknown f	6e-42

>gnl|CDD|218759 pfam05811, DUF842, Eukaryotic protein of unknown function (DUF842)

 Score =  135 bits (341), Expect = 6e-42
 Identities = 59/130 (45%), Positives = 88/130 (67%), Gaps = 3/130 (2%)

Query: 7   QKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQK 66
           +++ +AV  ++ D+D+  LRKMQ  M RC+ +CC++  A+ME VQ C+E CS P  +AQ+
Sbjct: 5   ERVQSAVDSMLDDLDRTILRKMQKKMFRCAAECCDDSRASMEEVQNCVERCSVPLAKAQQ 64

Query: 67  YLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLP 126
           Y+Q E  Q+Q RLQRC++ C D+ KD  G NP +SD     ++ E C  KCVDKH+ LLP
Sbjct: 65  YVQSELSQFQNRLQRCLMVCQDKFKDAKGPNPNESD---AAKEMERCVNKCVDKHVNLLP 121

Query: 127 TLFQKIKKYL 136
            + +++KK L
Sbjct: 122 EIVKRMKKTL 131

This family consists of a number of conserved eukaryotic proteins of unknown function. The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation. Length = 131

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	142
PF05811	131	DUF842: Eukaryotic protein of unknown function (DU	100.0
KOG3377|consensus	143		100.0
PF02953	66	zf-Tim10_DDP: Tim10/DDP family zinc finger; InterP	95.35
PF05811	131	DUF842: Eukaryotic protein of unknown function (DU	88.3
KOG3489|consensus	86		87.18

>PF05811 DUF842: Eukaryotic protein of unknown function (DUF842); InterPro: IPR008560 This family consists of a number of conserved eukaryotic proteins of unknown function

Probab=100.00  E-value=1.3e-55  Score=330.42  Aligned_cols=131  Identities=51%  Similarity=0.970  Sum_probs=128.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhhccccCCCHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHH
Q psy13200          3 EAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQKYLQMEFEQYQTRLQRC   82 (142)
Q Consensus         3 e~~q~rvq~av~~mv~~ldr~~lR~mQ~~~f~Caa~Ccd~~~~s~~~v~~Cve~C~~pl~~aq~~vq~El~~FQ~RLqRC   82 (142)
                      |++++||+.||++||++||++||||||++||+|+|+||||+++|+++||+||++|+.||.+||++|++||++||+||+||
T Consensus         1 ~~~~~rvq~av~~mv~~ld~~~lr~mQ~~~f~C~a~Ccdd~~~s~e~V~~Cve~C~~pl~~aq~~vq~El~~FQ~rlqrC   80 (131)
T PF05811_consen    1 EQQQQRVQKAVEKMVDDLDRKYLRKMQKKMFKCAAKCCDDSSASMEQVQRCVERCQQPLQQAQNYVQNELEQFQNRLQRC   80 (131)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhHHHhhhcCCCCCchhHHHHHHHHHhHHHHHHHHHhcccHHHHHHHHHHH
Q psy13200         83 VLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKYL  136 (142)
Q Consensus        83 ~~~C~Dk~kd~~~~~~~e~~~~~~~~~~e~Cv~~Cvd~hi~llP~l~~r~k~~l  136 (142)
                      +|+|+|+++|++++++++.++.+   +||+||++|||+||++||+|++|||++|
T Consensus        81 ~~~C~dk~~d~~~~~~~~~~~~~---~~e~C~~~Cvd~hi~llP~l~~r~k~~L  131 (131)
T PF05811_consen   81 VMHCQDKAKDKMDPNPNESDAEK---QLESCVNKCVDDHIKLLPSLTKRMKKSL  131 (131)
T ss_pred             HHHHHHHHHhhccCCCCchHHHH---HHHHHHHHHHHHHHHHhHHHHHHHHhhC
Confidence            99999999999999999988775   9999999999999999999999999986

The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation.

>KOG3377|consensus

Probab=100.00  E-value=2.6e-54  Score=324.68  Aligned_cols=137  Identities=39%  Similarity=0.772  Sum_probs=132.8

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhhccccCCCHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHH
Q psy13200          1 MGEAANQKINNAVMKIMVDIDKQFLRKMQADMHRCSVKCCENKDATMEGVQECLEVCSAPFMRAQKYLQMEFEQYQTRLQ   80 (142)
Q Consensus         1 m~e~~q~rvq~av~~mv~~ldr~~lR~mQ~~~f~Caa~Ccd~~~~s~~~v~~Cve~C~~pl~~aq~~vq~El~~FQ~RLq   80 (142)
                      |+|.++.||+++|++|+++|+|+|||+||+.||+|||+||||+.++.+.|++||++|+.|+++||+||++||++||+||+
T Consensus         7 m~E~~r~kveeav~~m~~~L~r~hir~mQ~~mfrCaa~Ccdd~r~~~e~v~~ci~~c~~pl~~aQ~~~~~El~~FQ~RL~   86 (143)
T KOG3377|consen    7 MLERQRRKVEEAVDEMQSDLDRDHIRKMQQAMFRCAAECCDDSRASEEAVNCCIECCVPPLTKAQQYVQSELGKFQDRLN   86 (143)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhHHHhhhcCCCCCchhHHHHHHHHHhHHHHHHHHHhcccHHHHHHHHHHHhhCC
Q psy13200         81 RCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKYLSDNS  140 (142)
Q Consensus        81 RC~~~C~Dk~kd~~~~~~~e~~~~~~~~~~e~Cv~~Cvd~hi~llP~l~~r~k~~l~~~~  140 (142)
                      ||+|+||||+++++++|+++.++.   .+||+||++|||+|++|||+|++|||++|++++
T Consensus        87 Rc~m~C~Dk~~~~~~~~~~~~~~~---~~~e~Cvn~cvd~~v~liP~m~k~MK~al~~~~  143 (143)
T KOG3377|consen   87 RCLMVCNDKFEASKLQGSKRLKAV---QQFESCVNKCVDDHVGLIPTMVKRMKEALSIGG  143 (143)
T ss_pred             HHHHHHhHHHHHhcccCCchHHHH---HHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCC
Confidence            999999999999999999986644   699999999999999999999999999999875

>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.35  E-value=0.17  Score=33.05  Aligned_cols=59  Identities=20%  Similarity=0.419  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHhhhcCCCCCchhHHHHHHHHHhHHHHHHHHHhcccHHHHHHHHH
Q psy13200         69 QMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKK  134 (142)
Q Consensus        69 q~El~~FQ~RLqRC~~~C~Dk~kd~~~~~~~e~~~~~~~~~~e~Cv~~Cvd~hi~llP~l~~r~k~  134 (142)
                      +.++..|++-+++-...|.||=-+.++ +++   +.   ..-++|+..|+++|+...-.+.+++.+
T Consensus         7 ~~q~~~~~~~~~~~t~~Cf~kCv~~~~-~~~---L~---~~E~~Ci~~C~~ky~~~~~~v~~~~~~   65 (66)
T PF02953_consen    7 EQQMKDFQELFNKLTERCFDKCVTKFP-SSS---LS---SKEESCIDNCVDKYIDTNQFVSKRFQQ   65 (66)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHS-TTS-SSS--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCC-CCC---Cc---hhHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            356778888888888888887666632 222   11   345789999999999998888877653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.

>PF05811 DUF842: Eukaryotic protein of unknown function (DUF842); InterPro: IPR008560 This family consists of a number of conserved eukaryotic proteins of unknown function

Probab=88.30  E-value=0.85  Score=34.07  Aligned_cols=49  Identities=22%  Similarity=0.567  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHhhHHHhhhcCCCCCchhHHHHHHHHHhHHHHHHHHHhcccH
Q psy13200         76 QTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLP  126 (142)
Q Consensus        76 Q~RLqRC~~~C~Dk~kd~~~~~~~e~~~~~~~~~~e~Cv~~Cvd~hi~llP  126 (142)
                      .+.+++|+..|+.....+  .+.-+.++.+|+..|..|+-.|.|+.-..+|
T Consensus        45 ~e~V~~Cve~C~~pl~~a--q~~vq~El~~FQ~rlqrC~~~C~dk~~d~~~   93 (131)
T PF05811_consen   45 MEQVQRCVERCQQPLQQA--QNYVQNELEQFQNRLQRCVMHCQDKAKDKMD   93 (131)
T ss_pred             HHHHHHHHHHhcChHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            456788888888643322  1111378889999999999999999877763

The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation.

>KOG3489|consensus

Probab=87.18  E-value=6.3  Score=27.84  Aligned_cols=68  Identities=19%  Similarity=0.389  Sum_probs=50.1

Q ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHhhHHHhhhcCCCCCchhHHHHHHHHHhHHHHHHHHHhcccHHHHHHHHHHHhh
Q psy13200         63 RAQKYLQMEF--EQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKYLSD  138 (142)
Q Consensus        63 ~aq~~vq~El--~~FQ~RLqRC~~~C~Dk~kd~~~~~~~e~~~~~~~~~~e~Cv~~Cvd~hi~llP~l~~r~k~~l~~  138 (142)
                      +.+.+|+.|-  .+||..+..=+-.|-||--++.+++..        ..-|.|...||+-+|..=-.|.+|+.....+
T Consensus        13 el~~fl~~E~qk~k~~~~VHqft~~CWdKCi~~~~skld--------s~~e~ClsnCV~RfiDts~~I~~r~~~~~~~   82 (86)
T KOG3489|consen   13 ELQQFLEAETQKQKFQEQVHQFTEICWDKCIEKPGSKLD--------SSEETCLSNCVNRFIDTSLFIVKRLAQMNQG   82 (86)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            5666766664  468888876666677766666554433        2556799999999999999999999887665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	142
3dxr_B	95	Mitochondrial import inner membrane translocase su	90.78
3cjh_B	64	Mitochondrial import inner membrane translocase S	90.35
2bsk_B	90	Mitochondrial import inner membrane translocase su	84.89
3cjh_A	64	Mitochondrial import inner membrane translocase S	81.08
3dxr_A	89	Mitochondrial import inner membrane translocase su	80.06

>3dxr_B Mitochondrial import inner membrane translocase subunit TIM10; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}

Probab=90.78  E-value=0.85  Score=31.52  Aligned_cols=64  Identities=14%  Similarity=0.269  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHhhhcCCCCCchhHHHHHHHHHhHHHHHHHHHhcccHHHHHHHHHHH
Q psy13200         67 YLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKYL  136 (142)
Q Consensus        67 ~vq~El~~FQ~RLqRC~~~C~Dk~kd~~~~~~~e~~~~~~~~~~e~Cv~~Cvd~hi~llP~l~~r~k~~l  136 (142)
                      ..+.|+..|++-+++=+-.|-+|=-+.--++   .++.   ..=+.|+..||++|+..--.|.+|+.+..
T Consensus        23 ~aE~q~~~~~~l~nklte~Cf~KCV~~~~~~---~~L~---~~E~~Ci~~Cv~Ky~d~~~~V~~~~q~~~   86 (95)
T 3dxr_B           23 AAEAELDLVTDMFNKLVNNCYKKCINTSYSE---GELN---KNESSCLDRCVAKYFETNVQVGENMQKMG   86 (95)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCCTTCC---SSCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC---CCCC---chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4578899999999988888888765421011   2222   23457999999999999888888887643

>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}

Probab=90.35  E-value=0.62  Score=29.57  Aligned_cols=58  Identities=12%  Similarity=0.284  Sum_probs=38.9

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHhhhcCCCCCchhHHHHHHHHHhHHHHHHHHHhcccHHHHHHHHH
Q psy13200         70 MEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKK  134 (142)
Q Consensus        70 ~El~~FQ~RLqRC~~~C~Dk~kd~~~~~~~e~~~~~~~~~~e~Cv~~Cvd~hi~llP~l~~r~k~  134 (142)
                      .+++.||+-+++=+-.|.+|=-+.+ |+++   +.   ..=++|+..||++|+..--.+.+|+.+
T Consensus         5 ~~~~~~~~~~~~lt~~Cf~kCv~~~-~~~~---L~---~~E~~Ci~~Cv~ky~~~~~~v~~~~~~   62 (64)
T 3cjh_B            5 NSKQKVQMSIHQFTNICFKKCVESV-NDSN---LS---SQEEQCLSNCVNRFLDTNIRIVNGLQN   62 (64)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHCCCC-SSSS---CC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcccC-CCCc---CC---hhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4566777777777777777655432 2222   11   234579999999999987777777654

>2bsk_B Mitochondrial import inner membrane translocase subunit TIM10; protein transport, mitochondrial protein import, TIM complex; 3.3A {Homo sapiens} SCOP: g.83.1.1

Probab=84.89  E-value=0.74  Score=31.24  Aligned_cols=68  Identities=15%  Similarity=0.250  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCCCCchhHHHHHHHHHhHHHHHHHHHhcccHHHHHHHHHHHh
Q psy13200         64 AQKYLQMEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKYLS  137 (142)
Q Consensus        64 aq~~vq~El~~FQ~RLqRC~~~C~Dk~kd~~~~~~~e~~~~~~~~~~e~Cv~~Cvd~hi~llP~l~~r~k~~l~  137 (142)
                      .+-.-+.++..|++-+++=+-.|.+|=-+.--++++   +.   ..=++|+..||++|+..--.|.+|+.+...
T Consensus         7 ~~~~~e~q~~~~~~l~n~lte~Cf~KCv~~~~~~~~---L~---~~E~~Ci~~Cv~Ky~d~~~~V~~~~~~~~~   74 (90)
T 2bsk_B            7 QQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAE---LS---KGESVCLDRCVSKYLDIHERMGKKLTELSM   74 (90)
T ss_dssp             ------CTTTTTHHHHHHHHHHHHHHHCCTTCCSSS---CC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCcCc---CC---hhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333445567778888877777777765432112222   11   234579999999999998888888876543

>3cjh_A Mitochondrial import inner membrane translocase S TIM13; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}

Probab=81.08  E-value=2  Score=27.35  Aligned_cols=28  Identities=11%  Similarity=0.355  Sum_probs=22.6

Q ss_pred             hHHHHHHHHHhcccHHHHHHHHHHHhhC
Q psy13200        112 SCAEKCVDKHIALLPTLFQKIKKYLSDN  139 (142)
Q Consensus       112 ~Cv~~Cvd~hi~llP~l~~r~k~~l~~~  139 (142)
                      +|+..||++|+..--.+.+++.+.+...
T Consensus        31 ~Ci~~Cv~Ky~~~~~~v~~~~~~~~~~~   58 (64)
T 3cjh_A           31 ACIDQCLAKYMRSWNVISKAYISRIQNA   58 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            5999999999999888888887766543

>3dxr_A Mitochondrial import inner membrane translocase subunit TIM9; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}

Probab=80.06  E-value=11  Score=25.26  Aligned_cols=58  Identities=14%  Similarity=0.324  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHhhhcCCCCCchhHHHHHHHHHhHHHHHHHHHhcccHHHHHHHHH
Q psy13200         70 MEFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKK  134 (142)
Q Consensus        70 ~El~~FQ~RLqRC~~~C~Dk~kd~~~~~~~e~~~~~~~~~~e~Cv~~Cvd~hi~llP~l~~r~k~  134 (142)
                      ..+..|++-+++=+-.|.+|=-+.++ +++   +.   ..=++|+..||++|+..--.|.+|+.+
T Consensus        21 ~q~k~~~~l~~~lte~Cf~kCv~~~~-~~~---L~---~~E~~Ci~~Cv~Ky~~~~~~v~~~~~~   78 (89)
T 3dxr_A           21 KQMKDFMRLYSNLVERCFTDCVNDFT-TSK---LT---NKEQTCIMKCSEKFLKHSERVGQRFQE   78 (89)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCCS-SSS---CC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCC-CCC---CC---chHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44667777777777777776554322 221   11   234579999999999988888888765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	142
d2bskb1	65	Mitochondrial import inner membrane translocase su	91.07
d2bska1	73	Mitochondrial import inner membrane translocase su	84.29

>d2bskb1 g.83.1.1 (B:13-77) Mitochondrial import inner membrane translocase subunit Tim10 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Tim10-like
superfamily: Tim10-like
family: Tim10/DDP
domain: Mitochondrial import inner membrane translocase subunit Tim10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.07  E-value=0.17  Score=31.11  Aligned_cols=62  Identities=15%  Similarity=0.283  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHHHHHhhHHHhhhcCCCCCchhHHHHHHHHHhHHHHHHHHHhcccHHHHHHHHHHHhh
Q psy13200         71 EFEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKYLSD  138 (142)
Q Consensus        71 El~~FQ~RLqRC~~~C~Dk~kd~~~~~~~e~~~~~~~~~~e~Cv~~Cvd~hi~llP~l~~r~k~~l~~  138 (142)
                      ||+..++=+++=+-.|.+|=-++-.++   .++.   ..=++|+..|+++|+..---|.+|+.+...+
T Consensus         2 e~~~~~~m~nklt~~Cf~kCV~~~~~~---~~L~---~~E~~Ci~~C~~ky~d~~~~v~~r~q~~~~~   63 (65)
T d2bskb1           2 EVEMMADMYNRMTSACHRKCVPPHYKE---AELS---KGESVCLDRCVSKYLDIHERMGKKLTELSMQ   63 (65)
T ss_dssp             TTTTTHHHHHHHHHHHHHHHCCTTCCS---SSCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCCCC---CcCC---chHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            344455555666666666654322111   1111   2445799999999999988888888876654

>d2bska1 g.83.1.1 (A:13-85) Mitochondrial import inner membrane translocase subunit Tim9 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Tim10-like
superfamily: Tim10-like
family: Tim10/DDP
domain: Mitochondrial import inner membrane translocase subunit Tim9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.29  E-value=1.2  Score=27.62  Aligned_cols=57  Identities=12%  Similarity=0.402  Sum_probs=36.5

Q ss_pred             HHHHHHHHHHHHHHhhHHHhhhcCCCCCchhHHHHHHHHHhHHHHHHHHHhcccHHHHHHHHHH
Q psy13200         72 FEQYQTRLQRCVLDCNDEIKDKMGVNPKQSDMDAYTRQFESCAEKCVDKHIALLPTLFQKIKKY  135 (142)
Q Consensus        72 l~~FQ~RLqRC~~~C~Dk~kd~~~~~~~e~~~~~~~~~~e~Cv~~Cvd~hi~llP~l~~r~k~~  135 (142)
                      +..|..-.++=+-.|.+|--..++.    .++.   ..=++|+..||++|+..=-.+.+|+.+.
T Consensus         2 ~kdfl~~yn~lte~Cf~kCv~~~~~----~~L~---~~E~~Ci~~Cv~Kf~~~~~~v~~rfqe~   58 (73)
T d2bska1           2 FKEFLGTYNKLTETCFLDCVKDFTT----REVK---PEETTCSEHCLQKYLKMTQRISMRFQEY   58 (73)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCCCCSS----SSCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCC----CCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566666666666666665444321    1111   2446799999999999877777776553