Psyllid ID: psy13205
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 267 | ||||||
| 347964067 | 858 | AGAP000567-PB [Anopheles gambiae str. PE | 0.846 | 0.263 | 0.586 | 9e-97 | |
| 194769748 | 969 | GF21801 [Drosophila ananassae] gi|190622 | 0.842 | 0.232 | 0.602 | 2e-95 | |
| 161077667 | 934 | CG34449, isoform A [Drosophila melanogas | 0.842 | 0.240 | 0.599 | 2e-95 | |
| 442615681 | 1052 | CG34449, isoform E [Drosophila melanogas | 0.842 | 0.213 | 0.599 | 3e-95 | |
| 161077669 | 911 | CG34449, isoform B [Drosophila melanogas | 0.842 | 0.246 | 0.599 | 4e-95 | |
| 195481683 | 953 | GE15451 [Drosophila yakuba] gi|194189261 | 0.842 | 0.236 | 0.602 | 4e-95 | |
| 195049421 | 988 | GH24914 [Drosophila grimshawi] gi|193893 | 0.842 | 0.227 | 0.595 | 3e-94 | |
| 198471570 | 937 | GA23072 [Drosophila pseudoobscura pseudo | 0.842 | 0.240 | 0.599 | 4e-93 | |
| 357616226 | 421 | hypothetical protein KGM_02192 [Danaus p | 0.842 | 0.534 | 0.620 | 2e-90 | |
| 189242404 | 609 | PREDICTED: similar to conserved hypothet | 0.842 | 0.369 | 0.599 | 2e-90 |
| >gi|347964067|ref|XP_003437032.1| AGAP000567-PB [Anopheles gambiae str. PEST] gi|333466905|gb|EGK96414.1| AGAP000567-PB [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
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Score = 358 bits (920), Expect = 9e-97, Method: Composition-based stats.
Identities = 169/288 (58%), Positives = 200/288 (69%), Gaps = 62/288 (21%)
Query: 1 MPKCHLKTRYLPATFAWFLLIGTTSLFYYYPCK-YYLTHHPWVIPIQAVITFFVLANFTL 59
MPKC +KTRY+PATFAW LL+ TT LF++YPC+ +Y+ HPWV QAVITFFV+ANFTL
Sbjct: 1 MPKCDVKTRYIPATFAWTLLLSTTFLFFWYPCRQFYIHRHPWVPAYQAVITFFVIANFTL 60
Query: 60 ATFMDPGAIPK--------------------VNGITVRMKWCVTCKFYRPPRCSHCSVCN 99
ATFMDPG IPK +NGITVRMKWCVTCKFYRPPRCSHCSVCN
Sbjct: 61 ATFMDPGVIPKAPPDEDREDEFRAPLYKNAEINGITVRMKWCVTCKFYRPPRCSHCSVCN 120
Query: 100 YCIETFDHHCPWVNNCIGRRNYRYFFFFLVTLSLHMASIFALCLIYTFDHHCPWVNNCIG 159
+CIETFDHHCPWVNNCIGRRNYR+FFFFL++LS+HM SIF+L L+Y
Sbjct: 121 HCIETFDHHCPWVNNCIGRRNYRFFFFFLISLSVHMLSIFSLSLVYVLQKE--------- 171
Query: 160 RRNYRYFFFFLVTLSLHMASIFALCLIYVMINKNSLSDTEAIISLVIMSLIAILFIPIFG 219
K+ L++ E I+++++M+++ +L IPIFG
Sbjct: 172 --------------------------------KDKLTEVEPIVAMILMAIVTLLAIPIFG 199
Query: 220 LTGFHMVLVARGRTTNEQVTGKFKGGYNPFSHGCWHNCCYGLCGPMYP 267
LTGFHMVLV+RGRTTNEQVTGKFKGGYNPFS GCW+NCCY CGP YP
Sbjct: 200 LTGFHMVLVSRGRTTNEQVTGKFKGGYNPFSRGCWNNCCYTQCGPQYP 247
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Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194769748|ref|XP_001966963.1| GF21801 [Drosophila ananassae] gi|190622758|gb|EDV38282.1| GF21801 [Drosophila ananassae] | Back alignment and taxonomy information |
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| >gi|161077667|ref|NP_727339.3| CG34449, isoform A [Drosophila melanogaster] gi|158031759|gb|AAF46491.4| CG34449, isoform A [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|442615681|ref|NP_001259382.1| CG34449, isoform E [Drosophila melanogaster] gi|440216585|gb|AGB95225.1| CG34449, isoform E [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|161077669|ref|NP_001096921.1| CG34449, isoform B [Drosophila melanogaster] gi|158031760|gb|ABW09368.1| CG34449, isoform B [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|195481683|ref|XP_002101737.1| GE15451 [Drosophila yakuba] gi|194189261|gb|EDX02845.1| GE15451 [Drosophila yakuba] | Back alignment and taxonomy information |
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| >gi|195049421|ref|XP_001992718.1| GH24914 [Drosophila grimshawi] gi|193893559|gb|EDV92425.1| GH24914 [Drosophila grimshawi] | Back alignment and taxonomy information |
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| >gi|198471570|ref|XP_002133772.1| GA23072 [Drosophila pseudoobscura pseudoobscura] gi|198145976|gb|EDY72399.1| GA23072 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
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| >gi|357616226|gb|EHJ70081.1| hypothetical protein KGM_02192 [Danaus plexippus] | Back alignment and taxonomy information |
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| >gi|189242404|ref|XP_968940.2| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 267 | ||||||
| FB|FBgn0085478 | 934 | CG34449 [Drosophila melanogast | 0.464 | 0.132 | 0.741 | 5.3e-80 | |
| ZFIN|ZDB-GENE-030407-3 | 751 | zdhhc8b "zinc finger, DHHC-typ | 0.453 | 0.161 | 0.611 | 1.7e-53 | |
| UNIPROTKB|Q2THW3 | 788 | ZDHHC8 "Uncharacterized protei | 0.453 | 0.153 | 0.595 | 2.3e-51 | |
| MGI|MGI:1338012 | 762 | Zdhhc8 "zinc finger, DHHC doma | 0.453 | 0.158 | 0.586 | 9.9e-51 | |
| RGD|1308875 | 762 | Zdhhc8 "zinc finger, DHHC-type | 0.453 | 0.158 | 0.586 | 9.9e-51 | |
| RGD|2320244 | 762 | LOC100364821 "zinc finger, DHH | 0.453 | 0.158 | 0.586 | 9.9e-51 | |
| UNIPROTKB|F1RHM7 | 782 | ZDHHC8 "Uncharacterized protei | 0.453 | 0.154 | 0.586 | 1.5e-50 | |
| UNIPROTKB|Q9ULC8 | 765 | ZDHHC8 "Probable palmitoyltran | 0.453 | 0.158 | 0.586 | 2.2e-50 | |
| UNIPROTKB|Q2THW8 | 765 | ZDHHC8 "Probable palmitoyltran | 0.453 | 0.158 | 0.578 | 2.9e-50 | |
| UNIPROTKB|E1BLT8 | 714 | ZDHHC5 "Palmitoyltransferase Z | 0.453 | 0.169 | 0.570 | 2.9e-50 |
| FB|FBgn0085478 CG34449 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Score = 542 (195.9 bits), Expect = 5.3e-80, Sum P(2) = 5.3e-80
Identities = 92/124 (74%), Positives = 107/124 (86%)
Query: 144 IYTFDHHCPWVNNCIGRRNYRYFFFFLVTLSLHMASIFALCLIYVMINKNSLSDTEAIIS 203
I TFDHHCPWVNNCIGRRNYR+FFFFLV+LS+HM SIF+LCL+YV+ ++ DT I++
Sbjct: 122 IETFDHHCPWVNNCIGRRNYRFFFFFLVSLSIHMLSIFSLCLVYVLKIMPNIKDTAPIVA 181
Query: 204 LVIMSLIAILFIPIFGLTGFHMVLVARGRTTNEQVTGKFKGGYNPFSHGCWHNCCYGLCG 263
+++M L+ IL IPIFGLTGFHMVLV+RGRTTNEQVTGKFKGGYNPFS GCWHNCCY G
Sbjct: 182 IILMGLVTILAIPIFGLTGFHMVLVSRGRTTNEQVTGKFKGGYNPFSRGCWHNCCYTQFG 241
Query: 264 PMYP 267
P YP
Sbjct: 242 PQYP 245
|
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| ZFIN|ZDB-GENE-030407-3 zdhhc8b "zinc finger, DHHC-type containing 8b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2THW3 ZDHHC8 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| MGI|MGI:1338012 Zdhhc8 "zinc finger, DHHC domain containing 8" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1308875 Zdhhc8 "zinc finger, DHHC-type containing 8" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| RGD|2320244 LOC100364821 "zinc finger, DHHC-type containing 8-like" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1RHM7 ZDHHC8 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9ULC8 ZDHHC8 "Probable palmitoyltransferase ZDHHC8" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2THW8 ZDHHC8 "Probable palmitoyltransferase ZDHHC8" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BLT8 ZDHHC5 "Palmitoyltransferase ZDHHC5" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 267 | |||
| COG5273 | 309 | COG5273, COG5273, Uncharacterized protein containi | 9e-29 | |
| pfam01529 | 167 | pfam01529, zf-DHHC, DHHC palmitoyltransferase | 3e-28 |
| >gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 9e-29
Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 31/195 (15%)
Query: 17 WFLLIGTTSLFYYYPCKYYLTHHPWVIPIQAVITFFVLANFTLATFMDPGAIPKVNGIT- 75
+ LL+ SL VI ++ L DPG + + ++
Sbjct: 43 YTLLVIVKSLSLVVLFIIL----------FIVILVLASFSYLLLLVSDPGYLGENITLSG 92
Query: 76 --------------VRMKWCVTCKFYRPPRCSHCSVCNYCIETFDHHCPWVNNCIGRRNY 121
+C TC Y+PPR HCS+CN C+ FDHHCPW+NNC+G RNY
Sbjct: 93 YRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNY 152
Query: 122 RYFFFFLVTLSLHMASIFALCLIY---TFDHH---CPWVNNCIGRRNYRYFFFFLVTLSL 175
R+F+ FL+ L + Y F + I + FF++T L
Sbjct: 153 RFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTSLAICFLIFGCSLLGVVFFIITTLL 212
Query: 176 HMASIFALCLIYVMI 190
+ I+ + I
Sbjct: 213 LLFLIYLILNNLTTI 227
|
Length = 309 |
| >gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 267 | |||
| KOG1311|consensus | 299 | 100.0 | ||
| KOG1315|consensus | 307 | 100.0 | ||
| PF01529 | 174 | zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 | 100.0 | |
| KOG1314|consensus | 414 | 100.0 | ||
| KOG1313|consensus | 309 | 100.0 | ||
| COG5273 | 309 | Uncharacterized protein containing DHHC-type Zn fi | 100.0 | |
| KOG1312|consensus | 341 | 99.95 | ||
| KOG0509|consensus | 600 | 99.95 | ||
| KOG1311|consensus | 299 | 99.83 | ||
| KOG1315|consensus | 307 | 99.8 | ||
| KOG1313|consensus | 309 | 99.76 | ||
| COG5273 | 309 | Uncharacterized protein containing DHHC-type Zn fi | 99.75 | |
| PF01529 | 174 | zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 | 99.73 | |
| KOG1314|consensus | 414 | 99.64 | ||
| KOG1312|consensus | 341 | 99.51 | ||
| KOG0509|consensus | 600 | 99.45 | ||
| PF12773 | 50 | DZR: Double zinc ribbon | 93.34 | |
| PF13240 | 23 | zinc_ribbon_2: zinc-ribbon domain | 90.45 | |
| PF13248 | 26 | zf-ribbon_3: zinc-ribbon domain | 87.56 | |
| PF10571 | 26 | UPF0547: Uncharacterised protein family UPF0547; I | 80.98 |
| >KOG1311|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=291.98 Aligned_cols=189 Identities=38% Similarity=0.705 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHHhhhh---cCCCCCCCC--C-----------------CccccceecCccccccCCCCccCcCCCccc
Q psy13205 45 IQAVITFFVLANFTLATF---MDPGAIPKV--N-----------------GITVRMKWCVTCKFYRPPRCSHCSVCNYCI 102 (267)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~---~dPG~ip~~--~-----------------~~~~~~~~C~~C~~~kP~Rs~hC~~C~~cv 102 (267)
...++....+.+...+.. +|||.+|+. . +...++++|.+|+..||+|||||++||+||
T Consensus 58 ~~~if~~~~~~~~~~~~~~~~sdpg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV 137 (299)
T KOG1311|consen 58 LGAIFFLLNILNLMLACFRMLSDPGIVPRADDEQIEDPERAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCV 137 (299)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCceecCcccCCCCCccccccCCCcccCCcccceEEcCcCcccCCCCcccchhhcccc
Confidence 334444444555544444 499999883 1 112358999999999999999999999999
Q ss_pred cCccccCccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccccccccccccchhhHHHHHHHHHHHHHHH
Q psy13205 103 ETFDHHCPWVNNCIGRRNYRYFFFFLVTLSLHMASIFALCLIYTFDHHCPWVNNCIGRRNYRYFFFFLVTLSLHMASIFA 182 (267)
Q Consensus 103 ~~~DHHC~w~~~CIg~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~DHHC~Wi~~CVG~~N~~~Fi~fl~~~~~~~~~~~~ 182 (267)
.||||||+|+|||||+||||+|+.|++++++.+++.++....+...++
T Consensus 138 ~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~-------------------------------- 185 (299)
T KOG1311|consen 138 LRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRA-------------------------------- 185 (299)
T ss_pred cccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------------------------
Confidence 999999999999999999999999999887777554433221100000
Q ss_pred HHHhhHhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhhhhc-ccCCCCCCCChhHhhhccccc
Q psy13205 183 LCLIYVMINKNSLSDTEAIISLVIMSLIAILFIPIFGLTGFHMVLVARGRTTNEQVTG-KFKGGYNPFSHGCWHNCCYGL 261 (267)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~h~~li~~n~TT~E~~~~-~~~~~~npy~~G~~~N~~~~~ 261 (267)
..... ...............++..+.++.....+.++.+|++++.+|+||+|++++ +.+.+++|||+|.++|+++++
T Consensus 186 ~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~~~~~~~~~~~~~~~~g~~~n~~~~~ 263 (299)
T KOG1311|consen 186 DNLKV--NLTPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYESIKSLDFVSRSNPYDLGLLKNLQEVF 263 (299)
T ss_pred ccccc--cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhhhhccccccccCCCchhHHHHHHHHh
Confidence 00000 000001112222333344455666666778999999999999999999986 333335999999999999999
Q ss_pred cccCCC
Q psy13205 262 CGPMYP 267 (267)
Q Consensus 262 ~~p~~~ 267 (267)
++|.++
T Consensus 264 ~~~~~~ 269 (299)
T KOG1311|consen 264 GGPLPL 269 (299)
T ss_pred CCCCCc
Confidence 999875
|
|
| >KOG1315|consensus | Back alignment and domain information |
|---|
| >PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
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| >KOG1314|consensus | Back alignment and domain information |
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| >KOG1313|consensus | Back alignment and domain information |
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| >COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1312|consensus | Back alignment and domain information |
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| >KOG0509|consensus | Back alignment and domain information |
|---|
| >KOG1311|consensus | Back alignment and domain information |
|---|
| >KOG1315|consensus | Back alignment and domain information |
|---|
| >KOG1313|consensus | Back alignment and domain information |
|---|
| >COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
| >PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG1314|consensus | Back alignment and domain information |
|---|
| >KOG1312|consensus | Back alignment and domain information |
|---|
| >KOG0509|consensus | Back alignment and domain information |
|---|
| >PF12773 DZR: Double zinc ribbon | Back alignment and domain information |
|---|
| >PF13240 zinc_ribbon_2: zinc-ribbon domain | Back alignment and domain information |
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| >PF13248 zf-ribbon_3: zinc-ribbon domain | Back alignment and domain information |
|---|
| >PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 267 | |||
| 2ayj_A | 56 | 50S ribosomal protein L40E; Zn-binding, beta-stran | 88.43 |
| >2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7 | Back alignment and structure |
|---|
Probab=88.43 E-value=0.46 Score=30.26 Aligned_cols=39 Identities=26% Similarity=0.514 Sum_probs=29.5
Q ss_pred cCCCCCCCCCCccccceecCccccccCCCCccCcCCCcc
Q psy13205 63 MDPGAIPKVNGITVRMKWCVTCKFYRPPRCSHCSVCNYC 101 (267)
Q Consensus 63 ~dPG~ip~~~~~~~~~~~C~~C~~~kP~Rs~hC~~C~~c 101 (267)
+||.-.+...........|..|...-|+|+.-|+.|+.-
T Consensus 4 ~e~~~~~lA~k~~~~k~ICrkC~ARnp~~A~~CRKCg~~ 42 (56)
T 2ayj_A 4 TDPAKLQIVQQRVFLKKVCRKCGALNPIRATKCRRCHST 42 (56)
T ss_dssp CCSCCSSTTTTCSCCCEEETTTCCEECTTCSSCTTTCCC
T ss_pred cchhHHHHHHHHHhchhhhccccCcCCcccccccCCCCC
Confidence 355544444444556789999999999999999988754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 267 | |||
| d2ayja1 | 56 | Ribosomal protein L40e {Sulfolobus solfataricus [T | 90.63 | |
| d2dkta2 | 56 | RING finger and CHY zinc finger domain-containing | 89.35 |
| >d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Rubredoxin-like superfamily: Zn-binding ribosomal proteins family: Ribosomal protein L40e domain: Ribosomal protein L40e species: Sulfolobus solfataricus [TaxId: 2287]
Probab=90.63 E-value=0.12 Score=31.21 Aligned_cols=38 Identities=26% Similarity=0.531 Sum_probs=27.9
Q ss_pred cCCCCCCCCCCccccceecCccccccCCCCccCcCCCc
Q psy13205 63 MDPGAIPKVNGITVRMKWCVTCKFYRPPRCSHCSVCNY 100 (267)
Q Consensus 63 ~dPG~ip~~~~~~~~~~~C~~C~~~kP~Rs~hC~~C~~ 100 (267)
+||.-..-........+.|..|...-|+|+..|+.|+.
T Consensus 4 ~eP~l~~lA~k~~~~k~ICrkC~AR~p~rAt~CRKCg~ 41 (56)
T d2ayja1 4 TDPAKLQIVQQRVFLKKVCRKCGALNPIRATKCRRCHS 41 (56)
T ss_dssp CCSCCSSTTTTCSCCCEEETTTCCEECTTCSSCTTTCC
T ss_pred cCHHHHHHHHHHhhhhHHHhhccccCCccccccccCCC
Confidence 45554433334445678999999999999999998764
|
| >d2dkta2 g.93.1.1 (A:82-137) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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