Psyllid ID: psy13347

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
Protein Sequence
AQGQQVQQLQQDPNDPTRFQILNLCSPGGGGVTTSIEMVNQEEDSLEEKPRSRRVACTCPNCTEGGEREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVVTEDSKLELSGGSTGAGTPESWINTDGNRCFLVNIEAPGTNGGAESPGLRPLSPDDGGSSSSGDEKMMITLGGETGEGSELTIVTDGTDC
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEccccccccEEccHHHHHHHHccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccEEEEccccccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccccEccccccccccccccccccccHHccccEccccHHHHHHHccccccccccccccEcccccccEEccccccEEEEEEcccccccccccccEEEEEEEccccccccccccccccccccccHHHHHHHHccccccEEccccccccEEccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHccccccEHEEEEEEccccccEEccccccEEccHHHHHHHHHHHccccccHccccEccccHHHEHHHHcccccccccccccccEccccHHHEHEEEcccccccccccccccccccccccccEccccHHHEHEEEccccccEEEEEcccccc
Coil and Loop (DISEMBL)
AQGQQVqqlqqdpndptrfqilnlcspggggvttsIEMVNQeedsleekprsrrvactcpncteggeREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCslrtadrkkvhiCHIEgcnkvygktshlRAHLRwhtgerpfvctwqfcgkrftrsdelqvnggrfgierTVVRIlpmtwcrekrfqcsechkkfmrsdHLQKHIKTHSKTRCTSLVmnfsdntvvtedsklelsggstgagtpeswintdgnrcflvnieapgtnggaespglrplspddggssssgdEKMMITLggetgegseltivtdgtdc
Flexible Loop (DISEMBL)
aqgqqvqqlqqdpndptRFQILNLCSPGGGGVTTSIEMVNQEEdsleekprsrrvacTCPNCTEGGEREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKrftrsdelqvnggrfgiertvvrilpmtwcREKRFQCSECHKKFmrsdhlqkhikthsktrctSLVMNFSDntvvtedsklelsggstgagtpeswiNTDGNRCFLVNIEAPGTNGGAESPGLRPLSPDDGGSSSSGDEKMMITLggetgegseltivtdgtdc
Low Complexity Region (SEG)
AqgqqvqqlqqDPNDPTRFQILNLCSPGGGGVTTSIEMVNQEEDSLEEKPRSRRVACTCPNCTEGGEREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVVTEDSKLELSGGSTGAGTPESWINTDGNRCFLVNIEAPGTNGGAESPGLRPLSPddggssssgdEKMMItlggetgegseltIVTDGTDC
Disordered region (IsUnstruct)
*******************QILNLCS****************************VACTCPNCTEGGEREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVV*******************SWINTDGNRCFLVNIE******************************************************
Disordered Region (DISOPRED)
***************************************************************************************************************************************HICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHI************************************************************************************************EGSELTIVTDGT**
Disordered Region (DISEMBL)
************PNDPTRFQILNLCSPGGGGVTTSIEMVN*************RVACTCPNCTEGGEREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVVTEDSKLELSGGSTGAGTPESWINTDGNRCFLVNIEAPGTNGGAESPGLRPL***********DEKMMITLGGETGEGSELTIVTDGTDC
Disordered Region (DISPRO)
******QQL*QDPNDPTRFQILNLCSPGGGGVTTSIEMVNQEEDSLEEKPRSRRVACTCPNCTEGGEREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVVTEDSKLELSGGSTGAGTPESWINTDGNRCFLVNIEAP**N*****PGLRPLSPDDGGSSSSGDEKMMITLGGETGEGSELTIVTD****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
AQGQQVQQLQQDPNDPTRFQILNLCSPGGGGVTTSIEMVNQEEDSLEEKPRSRRVACTCPNCTEGGEREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVVTEDSKLELSGGSTGAGTPESWINTDGNRCFLVNIEAPGTNGGAESPGLRPLSPDDGGSSSSGDEKMMITLGGETGEGSELTIVTDGTDC
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	339	2.2.26 [Sep-21-2011]
Q02446	784	Transcription factor Sp4	yes	N/A	0.268	0.116	0.647	1e-37
Q90WR8	771	Transcription factor Sp3	yes	N/A	0.407	0.178	0.511	1e-37
Q62445	782	Transcription factor Sp4	yes	N/A	0.268	0.116	0.638	2e-37
P08047	785	Transcription factor Sp1	no	N/A	0.383	0.165	0.522	3e-37
O89090	784	Transcription factor Sp1	no	N/A	0.383	0.165	0.516	3e-37
Q01714	786	Transcription factor Sp1	no	N/A	0.383	0.165	0.515	1e-36
O70494	783	Transcription factor Sp3	no	N/A	0.368	0.159	0.5	4e-36
Q02447	781	Transcription factor Sp3	no	N/A	0.418	0.181	0.487	7e-36
Q6BEB4	398	Transcription factor Sp5	no	N/A	0.309	0.263	0.556	1e-33
Q9JHX2	398	Transcription factor Sp5	no	N/A	0.268	0.228	0.628	2e-33

>sp|Q02446|SP4_HUMAN Transcription factor Sp4 OS=Homo sapiens GN=SP4 PE=1 SV=2

 Score =  157 bits (397), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 68/105 (64%), Positives = 75/105 (71%), Gaps = 14/105 (13%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           +KK HICHIEGC KVYGKTSHLRAHLRWHTGERPF+C W FCGKRFTRSDELQ +     
Sbjct: 643 KKKQHICHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFTRSDELQRHR---- 698

Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
                      T   EKRF+C EC K+FMRSDHL KH+KTH   +
Sbjct: 699 ----------RTHTGEKRFECPECSKRFMRSDHLSKHVKTHQNKK 733

Binds to GT and GC boxes promoters elements. Probable transcriptional activator.
Homo sapiens (taxid: 9606)

>sp|Q90WR8|SP3_CHICK Transcription factor Sp3 OS=Gallus gallus GN=SP3 PE=1 SV=1

 Score =  157 bits (396), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/170 (51%), Positives = 102/170 (60%), Gaps = 32/170 (18%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           +KK HICHI GC KVYGKTSHLRAHLRWH+GERPFVC W FCGKRFTRSDELQ +     
Sbjct: 607 KKKQHICHIPGCGKVYGKTSHLRAHLRWHSGERPFVCNWMFCGKRFTRSDELQRHR---- 662

Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKT-------HSKTRCTSLVMNF 244
                      T   EK+F C EC K+FMRSDHL KHIKT       HS +   + V   
Sbjct: 663 ----------RTHTGEKKFVCPECSKRFMRSDHLAKHIKTHQNKKGIHSSSTVLASVEAT 712

Query: 245 SDNTVVTE-DSKLELS----GGSTGAGTPESWINTDG--NRCFLVNIEAP 287
           SD+T++T   + L L+    G  +G GT    +NT G  N+  L N E P
Sbjct: 713 SDDTLITAGGTTLILANIQQGSVSGIGT----VNTSGTSNQDILTNTEIP 758

Transcriptional factor that can act as an activator or repressor depending on post-translational modifications. Binds to GT and GC boxes promoter elements. Competes with SP1 for the GC-box promoters. Weak activator of transcription (By similarity). Required for activation of SPARC transcription.

Gallus gallus (taxid: 9031)

>sp|Q62445|SP4_MOUSE Transcription factor Sp4 OS=Mus musculus GN=Sp4 PE=2 SV=2

 Score =  156 bits (395), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 67/105 (63%), Positives = 75/105 (71%), Gaps = 14/105 (13%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           +KK H+CHIEGC KVYGKTSHLRAHLRWHTGERPF+C W FCGKRFTRSDELQ +     
Sbjct: 641 KKKQHVCHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFTRSDELQRHR---- 696

Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
                      T   EKRF+C EC K+FMRSDHL KH+KTH   +
Sbjct: 697 ----------RTHTGEKRFECPECSKRFMRSDHLSKHVKTHQNKK 731

Binds to GT and GC boxes promoters elements. Probable transcriptional activator. Required for normal male reproductive behavior.

Mus musculus (taxid: 10090)

>sp|P08047|SP1_HUMAN Transcription factor Sp1 OS=Homo sapiens GN=SP1 PE=1 SV=3

 Score =  155 bits (393), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/157 (52%), Positives = 97/157 (61%), Gaps = 27/157 (17%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           +KK HICHI+GC KVYGKTSHLRAHLRWHTGERPF+CTW +CGKRFTRSDELQ +     
Sbjct: 622 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGERPFMCTWSYCGKRFTRSDELQRH----- 676

Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVVT 251
                      T   EK+F C EC K+FMRSDHL KHIKTH   +    V   S  T+  
Sbjct: 677 ---------KRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGPGVA-LSVGTL-- 724

Query: 252 EDSKLELSGGSTGAG--TPESWINTDGNRCFLVNIEA 286
               L+   GS G+G  TP + I T+     +V +EA
Sbjct: 725 ---PLDSGAGSEGSGTATPSALITTN-----MVAMEA 753

Transcription factor that can activate or repress transcription in response to physiological and pathological stimuli. Binds with high affinity to GC-rich motifs and regulates the expression of a large number of genes involved in a variety of processes such as cell growth, apoptosis, differentiation and immune responses. Highly regulated by post-translational modifications (phosphorylations, sumoylation, proteolytic cleavage, glycosylation and acetylation). Binds also the PDGFR-alpha G-box promoter. May have a role in modulating the cellular response to DNA damage. Implicated in chromatin remodeling. Plays a role in the recruitment of SMARCA4/BRG1 on the c-FOS promoter. Plays an essential role in the regulation of FE65 gene expression. In complex with ATF7IP, maintains telomerase activity in cancer cells by inducing TERT and TERC gene expression.

Homo sapiens (taxid: 9606)

>sp|O89090|SP1_MOUSE Transcription factor Sp1 OS=Mus musculus GN=Sp1 PE=1 SV=2

 Score =  155 bits (393), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 94/155 (60%), Gaps = 25/155 (16%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           +KK HICHI+GC KVYGKTSHLRAHLRWHTGERPF+C W +CGKRFTRSDELQ +     
Sbjct: 623 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGERPFMCNWSYCGKRFTRSDELQRH----- 677

Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVVT 251
                      T   EK+F C EC K+FMRSDHL KHIKTH   +    V   S  T+  
Sbjct: 678 ---------KRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGPGVA-LSVGTL-- 725

Query: 252 EDSKLELSGGSTGAGTPESWINTDGNRCFLVNIEA 286
               L+   GS G  TP + I T+     +V +EA
Sbjct: 726 ---PLDSGAGSEGTATPSALITTN-----MVAMEA 752

Transcription factor that can activate or repress transcription in response to physiological and pathological stimuli. Binds with high affinity to GC-rich motifs and regulates the expression of a large number of genes involved in a variety of processes such as cell growth, apoptosis, differentiation and immune responses. Highly regulated by post-translational modifications (phosphorylations, sumoylation, proteolytic cleavage, glycosylation and acetylation). Binds also the PDGFR-alpha G-box promoter. May have a role in modulating the cellular response to DNA damage. Implicated in chromatin remodeling. Plays a role in the recruitment of SMARCA4/BRG1 on the c-FOS promoter Plays an essential role in the regulation of FE65 gene expression.

Mus musculus (taxid: 10090)

>sp|Q01714|SP1_RAT Transcription factor Sp1 OS=Rattus norvegicus GN=Sp1 PE=1 SV=2

 Score =  153 bits (387), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/157 (51%), Positives = 96/157 (61%), Gaps = 27/157 (17%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           +KK HICHI+GC KVYGKTSHLRAHLRWHTGERPF+C W +CGKRFTRSDELQ +     
Sbjct: 623 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGERPFMCNWSYCGKRFTRSDELQRH----- 677

Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVVT 251
                      T   EK+F C EC K+FMRSDHL KHIKTH   +    V   S  T+  
Sbjct: 678 ---------KRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGPGVA-LSVGTL-- 725

Query: 252 EDSKLELSGGSTGAG--TPESWINTDGNRCFLVNIEA 286
               L+   GS G+G  TP + I T+     +V +EA
Sbjct: 726 ---PLDSGAGSEGSGTATPSALITTN-----MVAMEA 754

Transcription factor that can activate or repress transcription in response to physiological and pathological stimuli. Binds with high affinity to GC-rich motifs and regulates the expression of a large number of genes involved in a variety of processes such as cell growth, apoptosis, differentiation and immune responses. Highly regulated by post-translational modifications (phosphorylations, sumoylation, proteolytic cleavage, glycosylation and acetylation). Binds also the PDGFR-alpha G-box promoter. May have a role in modulating the cellular response to DNA damage. Implicated in chromatin remodeling. Plays an essential role in the regulation of FE65 gene expression (By similarity). Plays a role in the recruitment of SMARCA4/BRG1 on the c-FOS promoter.

Rattus norvegicus (taxid: 10116)

>sp|O70494|SP3_MOUSE Transcription factor Sp3 OS=Mus musculus GN=Sp3 PE=1 SV=2

 Score =  152 bits (384), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 77/154 (50%), Positives = 89/154 (57%), Gaps = 29/154 (18%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           +KK HICHI GC KVYGKTSHLRAHLRWH+GERPF+C W FCGKRFTRSDELQ +     
Sbjct: 619 KKKQHICHIPGCGKVYGKTSHLRAHLRWHSGERPFICNWMFCGKRFTRSDELQRHR---- 674

Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVVT 251
                      T   EK+F C EC K+FMRSDHL KHIKTH   +        S +TV+ 
Sbjct: 675 ----------RTHTGEKKFVCPECSKRFMRSDHLAKHIKTHQNKKVI-----HSSSTVL- 718

Query: 252 EDSKLELSGGSTGAGTPESWINTDGNRCFLVNIE 285
                     S  AG  ++ I   G    L NI+
Sbjct: 719 ---------ASVEAGRDDALITAGGTTLILANIQ 743

Transcriptional factor that can act as an activator or repressor depending on isoform and/or post-translational modifications. Binds to GT and GC boxes promoter elements. Competes with SP1 for the GC-box promoters. Weak activator of transcription but can activate a number of genes involved in different processes such as cell-cycle regulation, hormone-induction and house-keeping.

Mus musculus (taxid: 10090)

>sp|Q02447|SP3_HUMAN Transcription factor Sp3 OS=Homo sapiens GN=SP3 PE=1 SV=3

 Score =  151 bits (381), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 81/166 (48%), Positives = 98/166 (59%), Gaps = 24/166 (14%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           +KK HICHI GC KVYGKTSHLRAHLRWH+GERPFVC W +CGKRFTRSDELQ +     
Sbjct: 617 KKKQHICHIPGCGKVYGKTSHLRAHLRWHSGERPFVCNWMYCGKRFTRSDELQRHR---- 672

Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKT-------HSKTRCTSLVMNF 244
                      T   EK+F C EC K+FMRSDHL KHIKT       HS +   + V   
Sbjct: 673 ----------RTHTGEKKFVCPECSKRFMRSDHLAKHIKTHQNKKGIHSSSTVLASVEAA 722

Query: 245 SDNTVVTE-DSKLELSGGSTGAGTPESWINTDG--NRCFLVNIEAP 287
            D+T++T   + L L+    G+ +    +NT    N+  L N E P
Sbjct: 723 RDDTLITAGGTTLILANIQQGSVSGIGTVNTSATSNQDILTNTEIP 768

Transcriptional factor that can act as an activator or repressor depending on isoform and/or post-translational modifications. Binds to GT and GC boxes promoter elements. Competes with SP1 for the GC-box promoters. Weak activator of transcription but can activate a number of genes involved in different processes such as cell-cycle regulation, hormone-induction and house-keeping.

Homo sapiens (taxid: 9606)

>sp|Q6BEB4|SP5_HUMAN Transcription factor Sp5 OS=Homo sapiens GN=SP5 PE=2 SV=1

 Score =  144 bits (363), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 81/124 (65%), Gaps = 19/124 (15%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           +KK H+CH+ GC KVYGKTSHL+AHLRWHTGERPFVC W FCGK FTRSDELQ       
Sbjct: 292 KKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDELQ------- 344

Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVVT 251
                 R L  T   EKRF C EC K+FMRSDHL KH+KTH   +     +  ++  V  
Sbjct: 345 ------RHL-RTHTGEKRFACPECGKRFMRSDHLAKHVKTHQNKK-----LKVAEAGVKR 392

Query: 252 EDSK 255
           ED++
Sbjct: 393 EDAR 396

Binds to GC boxes promoters elements. Probable transcriptional activator that has a role in the coordination of changes in transcription required to generate pattern in the developing embryo.

Homo sapiens (taxid: 9606)

>sp|Q9JHX2|SP5_MOUSE Transcription factor Sp5 OS=Mus musculus GN=Sp5 PE=2 SV=1

 Score =  143 bits (360), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/105 (62%), Positives = 73/105 (69%), Gaps = 14/105 (13%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           +KK H+CH+ GC KVYGKTSHL+AHLRWHTGERPFVC W FCGK FTRSDELQ       
Sbjct: 292 KKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDELQ------- 344

Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
                 R L  T   EKRF C EC K+FMRSDHL KH+KTH   +
Sbjct: 345 ------RHL-RTHTGEKRFACPECGKRFMRSDHLAKHVKTHQNKK 382

Binds to GC boxes promoters elements. Probable transcriptional activator that has a role in the coordination of changes in transcription required to generate pattern in the developing embryo.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
295016215	566	Sp1-4 protein [Oncopeltus fasciatus]	0.495	0.296	0.439	4e-43
295016217	339	Sp1-4 protein [Folsomia candida]	0.510	0.510	0.435	2e-41
270016047	291	hypothetical protein TcasGA2_TC012895 [T	0.542	0.632	0.502	7e-40
91093921	279	PREDICTED: similar to GA19045-PA, partia	0.542	0.659	0.502	8e-40
195573409	969	GD18309 [Drosophila simulans] gi|1942006	0.274	0.095	0.700	7e-39
77455366	954	CG5669 [Drosophila simulans]	0.274	0.097	0.700	1e-38
77455364	956	CG5669 [Drosophila simulans]	0.274	0.097	0.700	1e-38
77455362	956	CG5669 [Drosophila melanogaster]	0.383	0.135	0.525	1e-38
21355195	968	Sp1-like factor for pairing sensitive-si	0.383	0.134	0.525	1e-38
195331562	966	GM23502 [Drosophila sechellia] gi|194121	0.280	0.098	0.688	1e-38

>gi|295016215|emb|CBH30973.1| Sp1-4 protein [Oncopeltus fasciatus]

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/230 (43%), Positives = 124/230 (53%), Gaps = 62/230 (26%)

Query: 19  FQILNLCSPGGG------------GVTTSIEMVNQEEDSLEEKPRSRRVACTCPNCTEGG 66
            QI++  SPGGG            GV  +     +EED L+ KPR RRVAC+CPNC EG 
Sbjct: 345 IQIISSGSPGGGQDSSSGERWQVVGVQPAGSPPLEEEDQLDSKPRMRRVACSCPNCIEGH 404

Query: 67  EREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCS 126
                     GC               +L+  + T  + +   ++   +  +        
Sbjct: 405 A---------GCS--------------RLRAEEATTSLEHVRTINKATWGGI-------- 433

Query: 127 LRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVN 186
                RKK H+CH+ GCNKVYGKTSHLRAHLRWHTGERPF+C+W+FCGK FTRSDELQ +
Sbjct: 434 -----RKKQHVCHVAGCNKVYGKTSHLRAHLRWHTGERPFICSWEFCGKCFTRSDELQRH 488

Query: 187 GGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
                           T   EKRF C++CHKKFMRSDHL KHIKTH K R
Sbjct: 489 R--------------RTHTGEKRFMCTQCHKKFMRSDHLSKHIKTHQKAR 524

Source: Oncopeltus fasciatus

Species: Oncopeltus fasciatus

Genus: Oncopeltus

Family: Lygaeidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|295016217|emb|CBH30974.1| Sp1-4 protein [Folsomia candida]

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/257 (43%), Positives = 130/257 (50%), Gaps = 84/257 (32%)

Query: 8   QLQQDPNDPTRFQILNLC------SPGGGGVTTSIEMVNQEEDSLEEKPRSRRVACTCPN 61
           QLQQDP DPT++Q++N        S G  G  T+I+    E D  + K R RRVACTCPN
Sbjct: 88  QLQQDPLDPTKWQVINQAPLMVTTSLGNAGTVTAIKT---ELD--KPKTRLRRVACTCPN 142

Query: 62  CTEGGEREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALIST 121
           CT+                                     A  NN               
Sbjct: 143 CTD-----------------------------------IDASSNN--------------- 152

Query: 122 LFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSD 181
               S    ++KK H+CHI GC KVYGKTSHLRAHLRWH GERPFVC W FCGKRFTRSD
Sbjct: 153 ----SRNNGEKKKQHLCHIPGCGKVYGKTSHLRAHLRWHAGERPFVCQWLFCGKRFTRSD 208

Query: 182 ELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLV 241
           ELQ +                T   EKRFQC EC KKFMRSDHL KHIKTHSK R  +  
Sbjct: 209 ELQRH--------------RKTHTGEKRFQCPECLKKFMRSDHLSKHIKTHSKNRSVT-- 252

Query: 242 MNFSDNTVVTEDSKLEL 258
              +D +++   +KLEL
Sbjct: 253 --GADGSLINS-TKLEL 266

Source: Folsomia candida

Species: Folsomia candida

Genus: Folsomia

Family: Isotomidae

Order: Collembola

Class: Ellipura

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270016047|gb|EFA12495.1| hypothetical protein TcasGA2_TC012895 [Tribolium castaneum]

 Score =  170 bits (431), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/211 (50%), Positives = 120/211 (56%), Gaps = 27/211 (12%)

Query: 128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNG 187
           R ADRKK HICHI GCNKVYGKTSHLRAHLRWHTGERPFVC+W FCGKRFTRSDELQ + 
Sbjct: 107 RHADRKKQHICHIPGCNKVYGKTSHLRAHLRWHTGERPFVCSWLFCGKRFTRSDELQRHR 166

Query: 188 GRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDN 247
                          T   EKRFQC+EC KKFMRSDHL KH+KTH K R T +  N  D 
Sbjct: 167 --------------RTHTGEKRFQCNECSKKFMRSDHLSKHLKTHQKQRITRI--NGDDI 210

Query: 248 TVVTEDSKLELSGGSTGAGTPESWINTDGNRCFLVNIEAPGTNGGAESPGLRPLSPDDGG 307
             V E+ K E     +       WI  + N    +  E    N   E+      +     
Sbjct: 211 DDVHEE-KDEWDDAQSDEQAKPMWITDNKNN---IKYEITQVNYAQEAATSTQSA----S 262

Query: 308 SSSSGDEKMMITLGGETGEGSELTIVTDGTD 338
           S SS +EKMMIT+   T E  EL I+ D  D
Sbjct: 263 SDSSSEEKMMITIS--TSEADEL-IIADPLD 290

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91093921|ref|XP_972252.1| PREDICTED: similar to GA19045-PA, partial [Tribolium castaneum]

 Score =  170 bits (431), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 106/211 (50%), Positives = 120/211 (56%), Gaps = 27/211 (12%)

Query: 128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNG 187
           R ADRKK HICHI GCNKVYGKTSHLRAHLRWHTGERPFVC+W FCGKRFTRSDELQ + 
Sbjct: 95  RHADRKKQHICHIPGCNKVYGKTSHLRAHLRWHTGERPFVCSWLFCGKRFTRSDELQRHR 154

Query: 188 GRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDN 247
                          T   EKRFQC+EC KKFMRSDHL KH+KTH K R T +  N  D 
Sbjct: 155 --------------RTHTGEKRFQCNECSKKFMRSDHLSKHLKTHQKQRITRI--NGDDI 198

Query: 248 TVVTEDSKLELSGGSTGAGTPESWINTDGNRCFLVNIEAPGTNGGAESPGLRPLSPDDGG 307
             V E+ K E     +       WI  + N    +  E    N   E+      +     
Sbjct: 199 DDVHEE-KDEWDDAQSDEQAKPMWITDNKNN---IKYEITQVNYAQEAATSTQSA----S 250

Query: 308 SSSSGDEKMMITLGGETGEGSELTIVTDGTD 338
           S SS +EKMMIT+   T E  EL I+ D  D
Sbjct: 251 SDSSSEEKMMITIS--TSEADEL-IIADPLD 278

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195573409|ref|XP_002104686.1| GD18309 [Drosophila simulans] gi|194200613|gb|EDX14189.1| GD18309 [Drosophila simulans]

 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 82/107 (76%), Gaps = 14/107 (13%)

Query: 130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGR 189
           +D+K+ HICHI GC+KVYGKTSHLRAHLRWHTGERPFVC+W FCGKRFTRSDELQ +   
Sbjct: 735 SDKKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRH--- 791

Query: 190 FGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
               R        T   EKRFQC EC+KKFMRSDHL KHIKTH KTR
Sbjct: 792 ---RR--------THTGEKRFQCQECNKKFMRSDHLSKHIKTHFKTR 827

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|77455366|gb|ABA86492.1| CG5669 [Drosophila simulans]

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 82/107 (76%), Gaps = 14/107 (13%)

Query: 130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGR 189
           +D+K+ HICHI GC+KVYGKTSHLRAHLRWHTGERPFVC+W FCGKRFTRSDELQ +   
Sbjct: 726 SDKKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRH--- 782

Query: 190 FGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
               R        T   EKRFQC EC+KKFMRSDHL KHIKTH KTR
Sbjct: 783 ---RR--------THTGEKRFQCQECNKKFMRSDHLSKHIKTHFKTR 818

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|77455364|gb|ABA86491.1| CG5669 [Drosophila simulans]

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 82/107 (76%), Gaps = 14/107 (13%)

Query: 130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGR 189
           +D+K+ HICHI GC+KVYGKTSHLRAHLRWHTGERPFVC+W FCGKRFTRSDELQ +   
Sbjct: 728 SDKKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRH--- 784

Query: 190 FGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
               R        T   EKRFQC EC+KKFMRSDHL KHIKTH KTR
Sbjct: 785 ---RR--------THTGEKRFQCQECNKKFMRSDHLSKHIKTHFKTR 820

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|77455362|gb|ABA86490.1| CG5669 [Drosophila melanogaster]

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/160 (52%), Positives = 102/160 (63%), Gaps = 30/160 (18%)

Query: 128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNG 187
           + +D+K+ HICHI GC+KVYGKTSHLRAHLRWHTGERPFVC+W FCGKRFTRSDELQ + 
Sbjct: 726 KHSDKKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRH- 784

Query: 188 GRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDN 247
                 R        T   EKRFQC EC+KKFMRSDHL KHIKTH K+R    ++  S  
Sbjct: 785 -----RR--------THTGEKRFQCQECNKKFMRSDHLSKHIKTHFKSRSGVELIELS-- 829

Query: 248 TVVTEDSKLELSGGSTGAGTPESWINTDGNRCFLVNIEAP 287
             + +++K        G   P+S    +G    +V IE P
Sbjct: 830 --IKQETK--------GGNAPKSISTVNG----IVTIEIP 855

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|21355195|ref|NP_651232.1| Sp1-like factor for pairing sensitive-silencing, isoform A [Drosophila melanogaster] gi|7301127|gb|AAF56261.1| Sp1-like factor for pairing sensitive-silencing, isoform A [Drosophila melanogaster] gi|19528313|gb|AAL90271.1| LD04007p [Drosophila melanogaster] gi|220960294|gb|ACL92683.1| CG5669-PA [synthetic construct]

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/160 (52%), Positives = 102/160 (63%), Gaps = 30/160 (18%)

Query: 128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNG 187
           + +D+K+ HICHI GC+KVYGKTSHLRAHLRWHTGERPFVC+W FCGKRFTRSDELQ + 
Sbjct: 732 KHSDKKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRH- 790

Query: 188 GRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDN 247
                 R        T   EKRFQC EC+KKFMRSDHL KHIKTH K+R    ++  S  
Sbjct: 791 -----RR--------THTGEKRFQCQECNKKFMRSDHLSKHIKTHFKSRSGVELIELS-- 835

Query: 248 TVVTEDSKLELSGGSTGAGTPESWINTDGNRCFLVNIEAP 287
             + +++K        G   P+S    +G    +V IE P
Sbjct: 836 --IKQETK--------GGNAPKSISTVNG----IVTIEIP 861

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195331562|ref|XP_002032470.1| GM23502 [Drosophila sechellia] gi|194121413|gb|EDW43456.1| GM23502 [Drosophila sechellia]

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/109 (68%), Positives = 83/109 (76%), Gaps = 14/109 (12%)

Query: 128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNG 187
           + +D+K+ HICHI GC+KVYGKTSHLRAHLRWHTGERPFVC+W FCGKRFTRSDELQ + 
Sbjct: 731 KHSDKKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRH- 789

Query: 188 GRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
                 R        T   EKRFQC EC+KKFMRSDHL KHIKTH KTR
Sbjct: 790 -----RR--------THTGEKRFQCQECNKKFMRSDHLSKHIKTHFKTR 825

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
MGI|MGI:107595	782	Sp4 "trans-acting transcriptio	0.268	0.116	0.647	5.7e-35
RGD|3741	783	Sp4 "Sp4 transcription factor"	0.268	0.116	0.647	5.7e-35
WB|WBGene00012735	412	sptf-3 [Caenorhabditis elegans	0.286	0.235	0.535	8.1e-35
FB|FBgn0039169	968	Spps "Sp1-like factor for pair	0.274	0.096	0.691	9.6e-35
UNIPROTKB|F1NZN3	495	SP3 "Transcription factor Sp3"	0.418	0.286	0.506	1.3e-34
UNIPROTKB|F1P2R1	689	SP3 "Transcription factor Sp3"	0.418	0.206	0.506	7.3e-34
UNIPROTKB|Q90WR8	771	SP3 "Transcription factor Sp3"	0.418	0.184	0.512	8.3e-34
ZFIN|ZDB-GENE-030131-2829	594	sp1 "sp1 transcription factor"	0.289	0.164	0.646	9.8e-34
ZFIN|ZDB-GENE-070410-111	691	sp3a "sp3a transcription facto	0.389	0.191	0.516	1.2e-33
UNIPROTKB|F1PLE5	788	SP4 "Uncharacterized protein"	0.268	0.115	0.666	3.9e-33

MGI|MGI:107595 Sp4 "trans-acting transcription factor 4" [Mus musculus (taxid:10090)]

 Score = 368 (134.6 bits), Expect = 5.7e-35, Sum P(2) = 5.7e-35
 Identities = 68/105 (64%), Positives = 76/105 (72%)

Query:   132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
             +KK H+CHIEGC KVYGKTSHLRAHLRWHTGERPF+C W FCGKRFTRSDELQ +     
Sbjct:   641 KKKQHVCHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFTRSDELQRH----- 695

Query:   192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
               RT           EKRF+C EC K+FMRSDHL KH+KTH   +
Sbjct:   696 -RRTHTG--------EKRFECPECSKRFMRSDHLSKHVKTHQNKK 731

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=ISO;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0008016 "regulation of heart contraction" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|3741 Sp4 "Sp4 transcription factor" [Rattus norvegicus (taxid:10116)]

 Score = 368 (134.6 bits), Expect = 5.7e-35, Sum P(2) = 5.7e-35
 Identities = 68/105 (64%), Positives = 76/105 (72%)

Query:   132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
             +KK H+CHIEGC KVYGKTSHLRAHLRWHTGERPF+C W FCGKRFTRSDELQ +     
Sbjct:   642 KKKQHVCHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFTRSDELQRH----- 696

Query:   192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
               RT           EKRF+C EC K+FMRSDHL KH+KTH   +
Sbjct:   697 -RRTHTG--------EKRFECPECSKRFMRSDHLSKHVKTHQNKK 732

GO:0003677 "DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0008016 "regulation of heart contraction" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

WB|WBGene00012735 sptf-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 297 (109.6 bits), Expect = 8.1e-35, Sum P(3) = 8.1e-35
 Identities = 61/114 (53%), Positives = 71/114 (62%)

Query:   128 RTADRK-KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVN 186
             R  D K ++HICH+  CNK YGKTSHLRAHLR H G +PF C WQ C K+FTRSDELQ +
Sbjct:   307 RQGDGKSRIHICHL--CNKTYGKTSHLRAHLRGHAGNKPFACDWQHCNKKFTRSDELQRH 364

Query:   187 GGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSL 240
                    RT           EKRF C+ C KKFMRSDHL KH +TH   R  ++
Sbjct:   365 ------RRTHTG--------EKRFACNHCGKKFMRSDHLTKHERTHQSNRINNI 404

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0010171 "body morphogenesis" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040002 "collagen and cuticulin-based cuticle development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0048477 "oogenesis" evidence=IMP

FB|FBgn0039169 Spps "Sp1-like factor for pairing sensitive-silencing" [Drosophila melanogaster (taxid:7227)]

 Score = 387 (141.3 bits), Expect = 9.6e-35, P = 9.6e-35
 Identities = 74/107 (69%), Positives = 82/107 (76%)

Query:   130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGR 189
             +D+K+ HICHI GC+KVYGKTSHLRAHLRWHTGERPFVC+W FCGKRFTRSDELQ +   
Sbjct:   734 SDKKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRH--- 790

Query:   190 FGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
                 RT           EKRFQC EC+KKFMRSDHL KHIKTH K+R
Sbjct:   791 ---RRTHTG--------EKRFQCQECNKKFMRSDHLSKHIKTHFKSR 826

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005704 "polytene chromosome band" evidence=IDA

GO:0060968 "regulation of gene silencing" evidence=IMP

UNIPROTKB|F1NZN3 SP3 "Transcription factor Sp3" [Gallus gallus (taxid:9031)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 84/166 (50%), Positives = 101/166 (60%)

Query:   132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
             +KK HICHI GC KVYGKTSHLRAHLRWH+GERPFVC W FCGKRFTRSDELQ +     
Sbjct:   331 KKKQHICHIPGCGKVYGKTSHLRAHLRWHSGERPFVCNWMFCGKRFTRSDELQRHR---- 386

Query:   192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNF---- 244
                        T   EK+F C EC K+FMRSDHL KHIKTH   +    +S V+      
Sbjct:   387 ----------KTHTGEKKFVCPECSKRFMRSDHLAKHIKTHQNKKGIHSSSTVLASVEAT 436

Query:   245 SDNTVVTED-SKLELSGGSTGAGTPESWINTDG--NRCFLVNIEAP 287
             SD+T++T   + L L+    G+ +    +NT G  N+  L N E P
Sbjct:   437 SDDTLITAGGTTLILANIQQGSVSGIGTVNTSGTSNQDILTNTEIP 482

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000979 "RNA polymerase II core promoter sequence-specific DNA binding" evidence=IEA

GO:0000987 "core promoter proximal region sequence-specific DNA binding" evidence=IEA

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0001779 "natural killer cell differentiation" evidence=IEA

GO:0001829 "trophectodermal cell differentiation" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0001892 "embryonic placenta development" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003690 "double-stranded DNA binding" evidence=IEA

GO:0017053 "transcriptional repressor complex" evidence=IEA

GO:0030183 "B cell differentiation" evidence=IEA

GO:0030217 "T cell differentiation" evidence=IEA

GO:0030219 "megakaryocyte differentiation" evidence=IEA

GO:0030224 "monocyte differentiation" evidence=IEA

GO:0030324 "lung development" evidence=IEA

GO:0030851 "granulocyte differentiation" evidence=IEA

GO:0043353 "enucleate erythrocyte differentiation" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA

GO:0048706 "embryonic skeletal system development" evidence=IEA

GO:0060136 "embryonic process involved in female pregnancy" evidence=IEA

GO:0060216 "definitive hemopoiesis" evidence=IEA

UNIPROTKB|F1P2R1 SP3 "Transcription factor Sp3" [Gallus gallus (taxid:9031)]

 Score = 375 (137.1 bits), Expect = 7.3e-34, P = 7.3e-34
 Identities = 84/166 (50%), Positives = 101/166 (60%)

Query:   132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
             +KK HICHI GC KVYGKTSHLRAHLRWH+GERPFVC W FCGKRFTRSDELQ +     
Sbjct:   525 KKKQHICHIPGCGKVYGKTSHLRAHLRWHSGERPFVCNWMFCGKRFTRSDELQRHR---- 580

Query:   192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNF---- 244
                        T   EK+F C EC K+FMRSDHL KHIKTH   +    +S V+      
Sbjct:   581 ----------KTHTGEKKFVCPECSKRFMRSDHLAKHIKTHQNKKGIHSSSTVLASVEAT 630

Query:   245 SDNTVVTED-SKLELSGGSTGAGTPESWINTDG--NRCFLVNIEAP 287
             SD+T++T   + L L+    G+ +    +NT G  N+  L N E P
Sbjct:   631 SDDTLITAGGTTLILANIQQGSVSGIGTVNTSGTSNQDILTNTEIP 676

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000979 "RNA polymerase II core promoter sequence-specific DNA binding" evidence=IEA

GO:0000987 "core promoter proximal region sequence-specific DNA binding" evidence=IEA

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0001779 "natural killer cell differentiation" evidence=IEA

GO:0001829 "trophectodermal cell differentiation" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0001892 "embryonic placenta development" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003690 "double-stranded DNA binding" evidence=IEA

GO:0017053 "transcriptional repressor complex" evidence=IEA

GO:0030183 "B cell differentiation" evidence=IEA

GO:0030217 "T cell differentiation" evidence=IEA

GO:0030219 "megakaryocyte differentiation" evidence=IEA

GO:0030224 "monocyte differentiation" evidence=IEA

GO:0030324 "lung development" evidence=IEA

GO:0030851 "granulocyte differentiation" evidence=IEA

GO:0043353 "enucleate erythrocyte differentiation" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA

GO:0048706 "embryonic skeletal system development" evidence=IEA

GO:0060136 "embryonic process involved in female pregnancy" evidence=IEA

GO:0060216 "definitive hemopoiesis" evidence=IEA

UNIPROTKB|Q90WR8 SP3 "Transcription factor Sp3" [Gallus gallus (taxid:9031)]

 Score = 376 (137.4 bits), Expect = 8.3e-34, P = 8.3e-34
 Identities = 85/166 (51%), Positives = 102/166 (61%)

Query:   132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
             +KK HICHI GC KVYGKTSHLRAHLRWH+GERPFVC W FCGKRFTRSDELQ +     
Sbjct:   607 KKKQHICHIPGCGKVYGKTSHLRAHLRWHSGERPFVCNWMFCGKRFTRSDELQRH----- 661

Query:   192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNF---- 244
               RT           EK+F C EC K+FMRSDHL KHIKTH   +    +S V+      
Sbjct:   662 -RRTHTG--------EKKFVCPECSKRFMRSDHLAKHIKTHQNKKGIHSSSTVLASVEAT 712

Query:   245 SDNTVVTED-SKLELSGGSTGAGTPESWINTDG--NRCFLVNIEAP 287
             SD+T++T   + L L+    G+ +    +NT G  N+  L N E P
Sbjct:   713 SDDTLITAGGTTLILANIQQGSVSGIGTVNTSGTSNQDILTNTEIP 758

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0016605 "PML body" evidence=IEA

ZFIN|ZDB-GENE-030131-2829 sp1 "sp1 transcription factor" [Danio rerio (taxid:7955)]

 Score = 371 (135.7 bits), Expect = 9.8e-34, P = 9.8e-34
 Identities = 73/113 (64%), Positives = 81/113 (71%)

Query:   128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNG 187
             R   +KK HICHI GC KVYGKTSHLRAHLRWHTGERPFVC+W FCGKRFTRSDELQ + 
Sbjct:   442 RDPSKKKQHICHIPGCGKVYGKTSHLRAHLRWHTGERPFVCSWSFCGKRFTRSDELQRH- 500

Query:   188 GRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH-SKTRCTS 239
                  +RT           EK+F C+EC K+FMRSDHL KHIKTH +K  C S
Sbjct:   501 -----KRTHTG--------EKKFSCTECPKRFMRSDHLSKHIKTHLNKKVCVS 540

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-070410-111 sp3a "sp3a transcription factor" [Danio rerio (taxid:7955)]

 Score = 373 (136.4 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 79/153 (51%), Positives = 94/153 (61%)

Query:   132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
             +KK H+CHI GC KVYGKTSHLRAHLRWH+GERPFVCTW FCGKRFTRSDELQ +     
Sbjct:   529 KKKQHVCHIAGCGKVYGKTSHLRAHLRWHSGERPFVCTWMFCGKRFTRSDELQRH----- 583

Query:   192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMN---FSDNT 248
               RT           EK+F CSEC K+FMRSDHL KHIKTH   +   +V +    SD  
Sbjct:   584 -RRTHTG--------EKKFVCSECSKRFMRSDHLAKHIKTHQNKKGGGVVSSGGVSSDGI 634

Query:   249 VVTEDSKLELS----GGSTGAGTPESWINTDGN 277
             +    + L L+    G   G  T  + +NT  +
Sbjct:   635 ITAGGTTLILTNIQPGSMQGLATVNATVNTSSS 667

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1PLE5 SP4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 370 (135.3 bits), Expect = 3.9e-33, P = 3.9e-33
 Identities = 70/105 (66%), Positives = 76/105 (72%)

Query:   132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
             +KK HICHIEGC KVYGKTSHLRAHLRWHTGERPFVC W FCGKRFTRSDELQ +     
Sbjct:   647 KKKQHICHIEGCGKVYGKTSHLRAHLRWHTGERPFVCNWMFCGKRFTRSDELQRH----- 701

Query:   192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
               RT           EKRF+C EC K+FMRSDHL KH+KTH   +
Sbjct:   702 -RRTHTG--------EKRFECPECSKRFMRSDHLSKHVKTHQNKK 737

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q90WR8	SP3_CHICK	No assigned EC number	0.5117	0.4070	0.1789	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	339
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	3e-05
smart00355	23	smart00355, ZnF_C2H2, zinc finger	6e-04
pfam00096	22	pfam00096, zf-C2H2, Zinc finger, C2H2 type	9e-04

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 40.1 bits (94), Expect = 3e-05
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)

Query: 152 HLRAHLRWHTGERPFVCTWQFCGKRFTR 179
           +LR H+R HTGE+P+ C    CGK F+ 
Sbjct: 1   NLRRHMRTHTGEKPYKCP--VCGKSFSS 26

Length = 26

>gnl|CDD|197676 smart00355, ZnF_C2H2, zinc finger

 Score = 36.3 bits (84), Expect = 6e-04
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 210 FQCSECHKKFMRSDHLQKHIKTH 232
           ++C EC K F     L++H++TH
Sbjct: 1   YRCPECGKVFKSKSALREHMRTH 23

Length = 23

>gnl|CDD|200998 pfam00096, zf-C2H2, Zinc finger, C2H2 type

 Score = 35.8 bits (83), Expect = 9e-04
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query: 211 QCSECHKKFMRSDHLQKHIKTH 232
           +C +C K F R  +L++H++TH
Sbjct: 1   KCPDCGKSFSRKSNLKRHLRTH 22

The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter. Length = 22

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	339
KOG2462|consensus	279		99.93
KOG2462|consensus	279		99.91
KOG1074|consensus	958		99.76
KOG3608|consensus	467		99.73
KOG3576|consensus	267		99.69
KOG3608|consensus	467		99.68
KOG3576|consensus	267		99.66
KOG1074|consensus	958		99.61
KOG3623|consensus	1007		99.49
KOG3623|consensus	1007		99.4
PLN03086	567	PRLI-interacting factor K; Provisional	99.19
PHA00733	128	hypothetical protein	99.02
PHA00733	128	hypothetical protein	98.96
PLN03086	567	PRLI-interacting factor K; Provisional	98.95
PHA02768	55	hypothetical protein; Provisional	98.91
PHA02768	55	hypothetical protein; Provisional	98.63
KOG3993|consensus	500		98.46
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.45
PHA00732	79	hypothetical protein	98.39
KOG3993|consensus	500		98.27
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.11
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.08
PHA00616	44	hypothetical protein	98.0
PHA00732	79	hypothetical protein	97.99
PHA00616	44	hypothetical protein	97.93
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.88
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.78
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.57
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.54
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.51
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.43
KOG1146|consensus	1406		97.27
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.15
smart00355	26	ZnF_C2H2 zinc finger.	97.0
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.96
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.82
KOG2231|consensus	669		96.77
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.67
COG5048	467	FOG: Zn-finger [General function prediction only]	96.57
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.29
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.24
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.2
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.11
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.74
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.69
smart00355	26	ZnF_C2H2 zinc finger.	95.5
COG5048	467	FOG: Zn-finger [General function prediction only]	95.48
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.48
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.12
KOG2231|consensus	669		95.03
PRK04860	160	hypothetical protein; Provisional	94.43
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.12
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.95
PRK04860	160	hypothetical protein; Provisional	93.41
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.19
KOG1146|consensus	1406		92.54
KOG2893|consensus	341		92.49
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.08
KOG4124|consensus	442		91.88
KOG2482|consensus	423		91.73
KOG2785|consensus	390		89.72
KOG2482|consensus	423		89.68
KOG4173|consensus	253		88.62
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	87.24
KOG4173|consensus	253		85.95
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	84.35
COG4049	65	Uncharacterized protein containing archaeal-type C	84.16
COG5236	493	Uncharacterized conserved protein, contains RING Z	84.03

>KOG2462|consensus

Probab=99.93  E-value=1.5e-26  Score=196.88  Aligned_cols=137  Identities=30%  Similarity=0.458  Sum_probs=126.8

Q ss_pred             ccccCccccccccccccccccccccccccCC---CCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccC
Q psy13347        102 AEVNNKIRLSSYFYPALISTLFSCSLRTADR---KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFT  178 (339)
Q Consensus       102 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~---~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~  178 (339)
                      ......+.|..|+........|.+|.++|-.   ++.+.|.+  |+|.|.....|++|+|+|+  -+++|.  +|||.|.
T Consensus       125 ~~~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~--C~K~YvSmpALkMHirTH~--l~c~C~--iCGKaFS  198 (279)
T KOG2462|consen  125 AAKHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKY--CGKVYVSMPALKMHIRTHT--LPCECG--ICGKAFS  198 (279)
T ss_pred             cccCCceeccccccccccccccchhhcccccccccccccCCC--CCceeeehHHHhhHhhccC--CCcccc--ccccccc
Confidence            3356788999999999999999999999954   68899977  9999999999999999997  679999  9999999


Q ss_pred             ChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC---CCccccccCCccccccccc
Q psy13347        179 RSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNFSDNTVVTEDSK  255 (339)
Q Consensus       179 ~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~---C~~C~~~f~~~~~l~~H~~  255 (339)
                      +...|.-|+|              +|+|||||.|..|+|.|..+++|+.||++|.+.+   |..|+|.|..++.|.+|..
T Consensus       199 RPWLLQGHiR--------------THTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  199 RPWLLQGHIR--------------THTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             chHHhhcccc--------------cccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            9999999986              8999999999999999999999999999999888   9999999999999999987


Q ss_pred             ccc
Q psy13347        256 LEL  258 (339)
Q Consensus       256 ~~~  258 (339)
                      ..-
T Consensus       265 S~C  267 (279)
T KOG2462|consen  265 SAC  267 (279)
T ss_pred             hcc
Confidence            654

>KOG2462|consensus

Probab=99.91  E-value=6.2e-25  Score=187.12  Aligned_cols=107  Identities=29%  Similarity=0.504  Sum_probs=100.8

Q ss_pred             ccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHH
Q psy13347        104 VNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDEL  183 (339)
Q Consensus       104 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L  183 (339)
                      ...-+.|..|++.++....|+.|+++|+  -+++|.+  |||.|.+.+.|+-|+|+|+|||||.|+  .|+|.|..+++|
T Consensus       158 s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRPWLLQGHiRTHTGEKPF~C~--hC~kAFADRSNL  231 (279)
T KOG2462|consen  158 SKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRPWLLQGHIRTHTGEKPFSCP--HCGKAFADRSNL  231 (279)
T ss_pred             ccccccCCCCCceeeehHHHhhHhhccC--CCccccc--ccccccchHHhhcccccccCCCCccCC--cccchhcchHHH
Confidence            3566789999999999999999999996  7899988  999999999999999999999999999  999999999999


Q ss_pred             HhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHH
Q psy13347        184 QVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIK  230 (339)
Q Consensus       184 ~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~  230 (339)
                      +.||.              +|.+.|+|+|..|+|.|..++.|.+|..
T Consensus       232 RAHmQ--------------THS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  232 RAHMQ--------------THSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             HHHHH--------------hhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            99996              7888999999999999999999999975

>KOG1074|consensus

Probab=99.76  E-value=2.9e-19  Score=171.63  Aligned_cols=66  Identities=20%  Similarity=0.474  Sum_probs=58.2

Q ss_pred             hccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC-------CC---ccccccCCccccccccccccCCCC
Q psy13347        197 VRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR-------CT---SLVMNFSDNTVVTEDSKLELSGGS  262 (339)
Q Consensus       197 ~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~-------C~---~C~~~f~~~~~l~~H~~~~~~~~~  262 (339)
                      ++-|.++|+|||||+|.+||+.|.++.+|+.||-+|....       |+   +|-+.|...-.|..|++.|..+..
T Consensus       621 LqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQhIriH~~~~~  696 (958)
T KOG1074|consen  621 LQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQI  696 (958)
T ss_pred             hhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccceEEeecCCCC
Confidence            4445569999999999999999999999999999997543       99   999999999999999999985543

>KOG3608|consensus

Probab=99.73  E-value=4.8e-19  Score=154.93  Aligned_cols=169  Identities=18%  Similarity=0.345  Sum_probs=140.9

Q ss_pred             CCCCccceeCCCCCCCCccccccccccCCCCCCchhHHHHHHhhhhhcccccccccCccccccccccccccccccccccc
Q psy13347         50 PRSRRVACTCPNCTEGGEREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRT  129 (339)
Q Consensus        50 ~~~~~~~~~C~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~  129 (339)
                      ..+..+..-||.|++.+.++.                     .+.-++.+......++|+|..|++.|.....|+.|++.
T Consensus       201 ~Hs~eKvvACp~Cg~~F~~~t---------------------kl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~r  259 (467)
T KOG3608|consen  201 THSNEKVVACPHCGELFRTKT---------------------KLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVR  259 (467)
T ss_pred             hcCCCeEEecchHHHHhcccc---------------------HHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHH
Confidence            345667777888885443322                     22224455666677799999999999999999999999


Q ss_pred             cCCCCeEEeeccccccccCCchhHHHHHh-hhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCC
Q psy13347        130 ADRKKVHICHIEGCNKVYGKTSHLRAHLR-WHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREK  208 (339)
Q Consensus       130 h~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k  208 (339)
                      |  ..-|+|++  |+......+.|.+|++ .|...|||+|+  .|.+.|.+.+.|.+|..              +|+ +-
T Consensus       260 H--vn~ykCpl--Cdmtc~~~ssL~~H~r~rHs~dkpfKCd--~Cd~~c~~esdL~kH~~--------------~HS-~~  318 (467)
T KOG3608|consen  260 H--VNCYKCPL--CDMTCSSASSLTTHIRYRHSKDKPFKCD--ECDTRCVRESDLAKHVQ--------------VHS-KT  318 (467)
T ss_pred             h--hhcccccc--cccCCCChHHHHHHHHhhhccCCCcccc--chhhhhccHHHHHHHHH--------------hcc-cc
Confidence            9  56799988  9999999999999999 59999999999  99999999999999985              444 56


Q ss_pred             CcCCCc--cccccCChhHHHHHHHhhc-CCC-----CCccccccCCccccccccccccCC
Q psy13347        209 RFQCSE--CHKKFMRSDHLQKHIKTHS-KTR-----CTSLVMNFSDNTVVTEDSKLELSG  260 (339)
Q Consensus       209 ~~~C~~--C~k~F~~~~~L~~H~~~h~-~~~-----C~~C~~~f~~~~~l~~H~~~~~~~  260 (339)
                      .|.|+.  |..+|++...|++|++.++ |..     |..|++.|++-.+|..|+...|.-
T Consensus       319 ~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f  378 (467)
T KOG3608|consen  319 VYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGF  378 (467)
T ss_pred             ceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcc
Confidence            699988  9999999999999998766 443     999999999999999998877753

>KOG3576|consensus

Probab=99.69  E-value=4.5e-18  Score=138.21  Aligned_cols=110  Identities=26%  Similarity=0.502  Sum_probs=65.3

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      ...|.|.+  |+|.|....-|.+|++.|...+.|.|.  .||+.|....+|++|++              +|+|.+||+|
T Consensus       115 ~d~ftCrv--CgK~F~lQRmlnrh~kch~~vkr~lct--~cgkgfndtfdlkrh~r--------------thtgvrpykc  176 (267)
T KOG3576|consen  115 QDSFTCRV--CGKKFGLQRMLNRHLKCHSDVKRHLCT--FCGKGFNDTFDLKRHTR--------------THTGVRPYKC  176 (267)
T ss_pred             CCeeeeeh--hhhhhhHHHHHHHHhhhccHHHHHHHh--hccCcccchhhhhhhhc--------------cccCccccch
Confidence            44566655  666666666666666666666666666  66666666666666654              5556666666


Q ss_pred             CccccccCChhHHHHHHHhhcCCC--------------CCccccccCCccccccccccccCC
Q psy13347        213 SECHKKFMRSDHLQKHIKTHSKTR--------------CTSLVMNFSDNTVVTEDSKLELSG  260 (339)
Q Consensus       213 ~~C~k~F~~~~~L~~H~~~h~~~~--------------C~~C~~~f~~~~~l~~H~~~~~~~  260 (339)
                      ..|+|.|..+-.|..|++.-+|..              |+.||..-.....+..|++.||..
T Consensus       177 ~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  177 SLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             hhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            666666666666666655333321              666666666666666666666543

>KOG3608|consensus

Probab=99.68  E-value=8e-18  Score=147.36  Aligned_cols=187  Identities=21%  Similarity=0.310  Sum_probs=133.3

Q ss_pred             ccccccCCCCCCchhHHHHHHhhhhhccc-----cccccc-C--ccccccccccccccccccccccccCCCCeEEeeccc
Q psy13347         71 FSYMLHGCLWGNTMEYALAARVLKLKIYK-----TTAEVN-N--KIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEG  142 (339)
Q Consensus        71 ~~~~~~~C~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~--~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~  142 (339)
                      +.|.=..|...|.......+++-+...+.     .....+ .  .....-|...+.++..|+.|++.|+++|...|+.  
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~--  212 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPH--  212 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecch--
Confidence            33444456666666666666555544441     111111 1  2233566777777778888888888888888855  


Q ss_pred             cccccCCchhHHHHHhhh--CCCCceecCccccCCccCChHHHHhhhcccCcc-------------cchhccccceecCC
Q psy13347        143 CNKVYGKTSHLRAHLRWH--TGERPFVCTWQFCGKRFTRSDELQVNGGRFGIE-------------RTVVRILPMTWCRE  207 (339)
Q Consensus       143 C~k~F~~~~~L~~H~~~H--~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~-------------~~~~~~~~~~h~~~  207 (339)
                      ||..|.++..|..|++..  ....+|.|.  .|.|.|.....|+.|+.+|-.-             ..+.++.+..|...
T Consensus       213 Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~--~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~d  290 (467)
T KOG3608|consen  213 CGELFRTKTKLFDHLRRQTELNTNSFQCA--QCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKD  290 (467)
T ss_pred             HHHHhccccHHHHHHHhhhhhcCCchHHH--HHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccC
Confidence            888888888887776643  345677777  7777777777777777665322             12234455688889


Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC--CCc--cccccCCccccccccccccCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR--CTS--LVMNFSDNTVVTEDSKLELSGG  261 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~--C~~--C~~~f~~~~~l~~H~~~~~~~~  261 (339)
                      |||+|+.|++.|.+.+.|.+|..+|....  |..  |.++|.+...|++|++.+|.+.
T Consensus       291 kpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~  348 (467)
T KOG3608|consen  291 KPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGN  348 (467)
T ss_pred             CCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999999999999998554  988  9999999999999999999665

>KOG3576|consensus

Probab=99.66  E-value=8.7e-18  Score=136.55  Aligned_cols=133  Identities=23%  Similarity=0.351  Sum_probs=112.9

Q ss_pred             hcccccccccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCC
Q psy13347         96 KIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGK  175 (339)
Q Consensus        96 ~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~  175 (339)
                      +.-.........+.|++|++.|..+..|.+|++-|...+.|.|.+  |||.|....+|++|+|+|+|.+||+|.  .|++
T Consensus       106 k~t~gsssd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~--~c~k  181 (267)
T KOG3576|consen  106 KSTIGSSSDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCS--LCEK  181 (267)
T ss_pred             cccccCCCCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchh--hhhH
Confidence            444455556788999999999999999999999999999999988  999999999999999999999999999  9999


Q ss_pred             ccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        176 RFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       176 ~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      .|.+.-.|..|++.-++...-.   .+....+|.|.|+.||..-.+...+..|++.|+..
T Consensus       182 aftqrcsleshl~kvhgv~~~y---aykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  182 AFTQRCSLESHLKKVHGVQHQY---AYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             HHHhhccHHHHHHHHcCchHHH---HHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            9999999999986543322111   11222468899999999999999999999998753

>KOG1074|consensus

Probab=99.61  E-value=2.1e-16  Score=152.21  Aligned_cols=57  Identities=19%  Similarity=0.297  Sum_probs=51.8

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC---CCccccccCCccccccccccccCCCCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNFSDNTVVTEDSKLELSGGSTG  264 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~---C~~C~~~f~~~~~l~~H~~~~~~~~~~~  264 (339)
                      -|-+|-+|-+...-++.|+.|.|+|+|++   |.+|++.|.++.+|+.||..|...-...
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R  663 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPAR  663 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCcccc
Confidence            36789999999999999999999999999   9999999999999999999997654333

>KOG3623|consensus

Probab=99.49  E-value=5.8e-15  Score=140.11  Aligned_cols=80  Identities=33%  Similarity=0.675  Sum_probs=74.9

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      +.+|.|+.  |+|+|...++|.+|.--|+|.+||+|.  +|.|.|+.+..|..|+|              .|.|+|||+|
T Consensus       892 ~gmyaCDq--CDK~FqKqSSLaRHKYEHsGqRPyqC~--iCkKAFKHKHHLtEHkR--------------LHSGEKPfQC  953 (1007)
T KOG3623|consen  892 DGMYACDQ--CDKAFQKQSSLARHKYEHSGQRPYQCI--ICKKAFKHKHHLTEHKR--------------LHSGEKPFQC  953 (1007)
T ss_pred             cccchHHH--HHHHHHhhHHHHHhhhhhcCCCCcccc--hhhHhhhhhhhhhhhhh--------------hccCCCcchh
Confidence            56799977  999999999999999999999999999  99999999999999985              8999999999


Q ss_pred             CccccccCChhHHHHHHH
Q psy13347        213 SECHKKFMRSDHLQKHIK  230 (339)
Q Consensus       213 ~~C~k~F~~~~~L~~H~~  230 (339)
                      +.|+|+|.....+..||.
T Consensus       954 dKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  954 DKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             hhhhhhcccccchHhhhc
Confidence            999999999999999986

>KOG3623|consensus

Probab=99.40  E-value=8.5e-14  Score=132.35  Aligned_cols=119  Identities=23%  Similarity=0.487  Sum_probs=97.6

Q ss_pred             eEEeeccccccccCCchhHHHHHhh-h-CCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRW-H-TGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~-H-~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      ...|.+  |.+.+.+...|+.|++. | ..+..|.|.  .|.++|.++..|.+||..|.....-.+.+ ..-...|.|+|
T Consensus       210 lltcpy--cdrgykrltslkeHikyrhekne~nfsC~--lCsytFAyRtQLErhm~~hkpg~dqa~sl-tqsa~lRKFKC  284 (1007)
T KOG3623|consen  210 LLTCPY--CDRGYKRLTSLKEHIKYRHEKNEPNFSCM--LCSYTFAYRTQLERHMQLHKPGGDQAISL-TQSALLRKFKC  284 (1007)
T ss_pred             hhcchh--HHHHHHHHHHHHHHHHHHHhhCCCCCcch--hhhhhhhhHHHHHHHHHhhcCCCcccccc-cchhhhccccc
Confidence            467977  99999999999999884 4 345679999  99999999999999998775433211111 11123578999


Q ss_pred             CccccccCChhHHHHHHHhhcCCC---CCccccccCCcccccccccccc
Q psy13347        213 SECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNFSDNTVVTEDSKLEL  258 (339)
Q Consensus       213 ~~C~k~F~~~~~L~~H~~~h~~~~---C~~C~~~f~~~~~l~~H~~~~~  258 (339)
                      ..|||.|+.+.+|+.|+|+|.|++   |+.|+|+|+....+..||...-
T Consensus       285 tECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSSKK  333 (1007)
T KOG3623|consen  285 TECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSSKK  333 (1007)
T ss_pred             cccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccccc
Confidence            999999999999999999999999   9999999999999999987543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.19  E-value=3.2e-11  Score=115.53  Aligned_cols=110  Identities=15%  Similarity=0.162  Sum_probs=47.9

Q ss_pred             ccceeCCCCCCCCccccccccccCCCCCCchhHHHHHHhhhhhcccccccccCccccccccccccccccccccccccCCC
Q psy13347         54 RVACTCPNCTEGGEREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRTADRK  133 (339)
Q Consensus        54 ~~~~~C~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~  133 (339)
                      .....|++|........+..+.-.|.+.....-.    --.-.++ .+..+.+|+.|..|+..|. ...|..|++.|+  
T Consensus       405 ~~~V~C~NC~~~i~l~~l~lHe~~C~r~~V~Cp~----~~Cg~v~-~r~el~~H~~C~~Cgk~f~-~s~LekH~~~~H--  476 (567)
T PLN03086        405 VDTVECRNCKHYIPSRSIALHEAYCSRHNVVCPH----DGCGIVL-RVEEAKNHVHCEKCGQAFQ-QGEMEKHMKVFH--  476 (567)
T ss_pred             CCeEECCCCCCccchhHHHHHHhhCCCcceeCCc----cccccee-eccccccCccCCCCCCccc-hHHHHHHHHhcC--
Confidence            3446899999654444433333333321100000    0000222 3334444555555554443 334455554442  


Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCcc
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRF  177 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f  177 (339)
                      +++.|  + |++.| .+..|..|+++|...+++.|.  .|++.|
T Consensus       477 kpv~C--p-Cg~~~-~R~~L~~H~~thCp~Kpi~C~--fC~~~v  514 (567)
T PLN03086        477 EPLQC--P-CGVVL-EKEQMVQHQASTCPLRLITCR--FCGDMV  514 (567)
T ss_pred             CCccC--C-CCCCc-chhHHHhhhhccCCCCceeCC--CCCCcc
Confidence            44555  3 55433 334455555555555555554  455544

>PHA00733 hypothetical protein

Probab=99.02  E-value=1.7e-10  Score=90.76  Aligned_cols=85  Identities=21%  Similarity=0.316  Sum_probs=65.1

Q ss_pred             cCCCCeEEeeccccccccCCchhHHHH--Hh---hhCCCCceecCccccCCccCChHHHHhhhcccCcccchhcccccee
Q psy13347        130 ADRKKVHICHIEGCNKVYGKTSHLRAH--LR---WHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTW  204 (339)
Q Consensus       130 h~~~~~~~C~~~~C~k~F~~~~~L~~H--~~---~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h  204 (339)
                      ....+++.|.+  |.+.|.....|..|  ++   .+.+.++|.|+  .|++.|.....|..|++.              |
T Consensus        35 ~~~~~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~--~Cgk~Fss~s~L~~H~r~--------------h   96 (128)
T PHA00733         35 TPEQKRLIRAV--VKTLIYNPQLLDESSYLYKLLTSKAVSPYVCP--LCLMPFSSSVSLKQHIRY--------------T   96 (128)
T ss_pred             ChhhhhHHHHH--HhhhccChhhhcchHHHHhhcccCCCCCccCC--CCCCcCCCHHHHHHHHhc--------------C
Confidence            33467888977  99888887766655  22   23447889998  999999999999988752              2


Q ss_pred             cCCCCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        205 CREKRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       205 ~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                        ..+|.|.+|++.|.....|..|+...++
T Consensus        97 --~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         97 --EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             --CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence              2468999999999999999999887665

>PHA00733 hypothetical protein

Probab=98.96  E-value=2.1e-10  Score=90.24  Aligned_cols=88  Identities=14%  Similarity=0.161  Sum_probs=71.4

Q ss_pred             CCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCC-CCCcc
Q psy13347        162 GERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKT-RCTSL  240 (339)
Q Consensus       162 ~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~-~C~~C  240 (339)
                      ..+++.|.  +|.+.|.....|..|.-        ++.++ .+.+.+||.|+.|++.|.+...|..|++.|... .|..|
T Consensus        37 ~~~~~~~~--~~~~~~~~~~~l~~~~~--------l~~~~-~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~C  105 (128)
T PHA00733         37 EQKRLIRA--VVKTLIYNPQLLDESSY--------LYKLL-TSKAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVC  105 (128)
T ss_pred             hhhhHHHH--HHhhhccChhhhcchHH--------HHhhc-ccCCCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCC
Confidence            35789999  99999999888877621        12222 333578999999999999999999999976433 39999


Q ss_pred             ccccCCccccccccccccCC
Q psy13347        241 VMNFSDNTVVTEDSKLELSG  260 (339)
Q Consensus       241 ~~~f~~~~~l~~H~~~~~~~  260 (339)
                      ++.|.....|..|+...|+.
T Consensus       106 gK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        106 GKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CCccCCHHHHHHHHHHhcCc
Confidence            99999999999999988854

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.95  E-value=1.6e-09  Score=104.12  Aligned_cols=119  Identities=13%  Similarity=0.288  Sum_probs=89.7

Q ss_pred             cCcccccc--ccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHH
Q psy13347        105 NNKIRLSS--YFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDE  182 (339)
Q Consensus       105 ~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~  182 (339)
                      .+...|..  |+..|          +...-++.+.|.+  |++.|. ...|..|++.|+  ++|.|+   |++.+ .+..
T Consensus       431 r~~V~Cp~~~Cg~v~----------~r~el~~H~~C~~--Cgk~f~-~s~LekH~~~~H--kpv~Cp---Cg~~~-~R~~  491 (567)
T PLN03086        431 RHNVVCPHDGCGIVL----------RVEEAKNHVHCEK--CGQAFQ-QGEMEKHMKVFH--EPLQCP---CGVVL-EKEQ  491 (567)
T ss_pred             CcceeCCccccccee----------eccccccCccCCC--CCCccc-hHHHHHHHHhcC--CCccCC---CCCCc-chhH
Confidence            34555663  66665          2222244469977  999996 688999999975  789995   99765 5688


Q ss_pred             HHhhhcccCcccchhccccceecCCCCcCCCccccccCC----------hhHHHHHHHhhcCCC---CCccccccCCccc
Q psy13347        183 LQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMR----------SDHLQKHIKTHSKTR---CTSLVMNFSDNTV  249 (339)
Q Consensus       183 L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~----------~~~L~~H~~~h~~~~---C~~C~~~f~~~~~  249 (339)
                      |..|+.              .|...+++.|.+|++.|..          ...|..|+..+ +.+   |..|++.|..+ .
T Consensus       492 L~~H~~--------------thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-d  555 (567)
T PLN03086        492 MVQHQA--------------STCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-E  555 (567)
T ss_pred             HHhhhh--------------ccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-h
Confidence            999974              7888999999999999952          35899999986 444   99999988654 6


Q ss_pred             ccccccccc
Q psy13347        250 VTEDSKLEL  258 (339)
Q Consensus       250 l~~H~~~~~  258 (339)
                      |..|+..-|
T Consensus       556 m~~H~~~~h  564 (567)
T PLN03086        556 MDIHQIAVH  564 (567)
T ss_pred             HHHHHHHhh
Confidence            677766554

>PHA02768 hypothetical protein; Provisional

Probab=98.91  E-value=9e-10  Score=71.62  Aligned_cols=44  Identities=11%  Similarity=0.332  Sum_probs=40.4

Q ss_pred             CcCCCccccccCChhHHHHHHHhhc-CCCCCccccccCCcccccc
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKTHS-KTRCTSLVMNFSDNTVVTE  252 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~h~-~~~C~~C~~~f~~~~~l~~  252 (339)
                      .|.|+.||+.|.+..+|..|+++|+ +.+|..|++.|...+.|..
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcCCcccCCcccceecccceeEE
Confidence            4999999999999999999999999 6669999999998888764

>PHA02768 hypothetical protein; Provisional

Probab=98.63  E-value=1.1e-08  Score=66.52  Aligned_cols=44  Identities=27%  Similarity=0.440  Sum_probs=39.6

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHH
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQ  184 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~  184 (339)
                      .|.|+.  ||+.|.+..+|..|+++|+  ++|+|.  .|++.|...+.|.
T Consensus         5 ~y~C~~--CGK~Fs~~~~L~~H~r~H~--k~~kc~--~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPI--CGEIYIKRKSMITHLRKHN--TNLKLS--NCKRISLRTGEYI   48 (55)
T ss_pred             ccCcch--hCCeeccHHHHHHHHHhcC--CcccCC--cccceecccceeE
Confidence            489966  9999999999999999998  799999  9999999877663

>KOG3993|consensus

Probab=98.46  E-value=2.4e-08  Score=90.46  Aligned_cols=154  Identities=16%  Similarity=0.114  Sum_probs=107.9

Q ss_pred             cccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCC--------C-----------
Q psy13347        103 EVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTG--------E-----------  163 (339)
Q Consensus       103 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--------~-----------  163 (339)
                      +....|.|..|-..+..-..|-.|.-.---.-.|+|  ++|+|+|.-..+|..|.|+|.-        .           
T Consensus       263 n~iGdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrC--PEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~ra  340 (500)
T KOG3993|consen  263 NVIGDYICQLCKEKYEDAFALAQHRCPRIVHVEYRC--PECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRA  340 (500)
T ss_pred             ccHHHHHHHHHHHhhhhHHHHhhccCCeeEEeeecC--CcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhh
Confidence            344567899998888888888888633333456999  6699999999999999999932        1           


Q ss_pred             --------------CceecCccccCCccCChHHHHhhhcccCcccchh---------cccccee---------------c
Q psy13347        164 --------------RPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVV---------RILPMTW---------------C  205 (339)
Q Consensus       164 --------------k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~---------~~~~~~h---------------~  205 (339)
                                    --|.|.  +|+|.|.+...|+.|+.+|+......         +.....|               .
T Consensus       341 e~~ea~rsg~dss~gi~~C~--~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g  418 (500)
T KOG3993|consen  341 EVQEAERSGDDSSSGIFSCH--TCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHG  418 (500)
T ss_pred             hhhhccccCCcccCceeecH--HhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccc
Confidence                          138999  99999999999999977665332211         0000011               0


Q ss_pred             C--------CCCcCCCccccccCChhHHHHHHHhhc---CCCCCccccccCCccccccccccccCC
Q psy13347        206 R--------EKRFQCSECHKKFMRSDHLQKHIKTHS---KTRCTSLVMNFSDNTVVTEDSKLELSG  260 (339)
Q Consensus       206 ~--------~k~~~C~~C~k~F~~~~~L~~H~~~h~---~~~C~~C~~~f~~~~~l~~H~~~~~~~  260 (339)
                      .        .....|+.|+..+..+..--.|.+.-.   +..|.+|.-.|.+...|.+|+...|..
T Consensus       419 ~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hps  484 (500)
T KOG3993|consen  419 DEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPS  484 (500)
T ss_pred             cceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChH
Confidence            0        122457778877777765555554332   222999999999999999998887743

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.45  E-value=1e-07  Score=52.95  Aligned_cols=25  Identities=56%  Similarity=1.305  Sum_probs=19.4

Q ss_pred             hHHHHHhhhCCCCceecCccccCCccC
Q psy13347        152 HLRAHLRWHTGERPFVCTWQFCGKRFT  178 (339)
Q Consensus       152 ~L~~H~~~H~~~k~~~C~~~~C~~~f~  178 (339)
                      +|.+|+++|++++||.|+  .|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~--~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCP--YCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEES--SSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCC--CCcCeeC
Confidence            477788888888888887  8887775

...

>PHA00732 hypothetical protein

Probab=98.39  E-value=2.1e-07  Score=66.48  Aligned_cols=47  Identities=17%  Similarity=0.349  Sum_probs=41.2

Q ss_pred             CcCCCccccccCChhHHHHHHH-hhcCCCCCccccccCCcccccccccccc
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIK-THSKTRCTSLVMNFSDNTVVTEDSKLEL  258 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~-~h~~~~C~~C~~~f~~~~~l~~H~~~~~  258 (339)
                      ||.|+.|++.|.+...|..|++ .|++..|+.|++.|.   .|..|.++..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCCccCCCCCEeC---ChhhhhcccC
Confidence            5899999999999999999998 577777999999998   5888886553

>KOG3993|consensus

Probab=98.27  E-value=1.6e-07  Score=85.10  Aligned_cols=96  Identities=24%  Similarity=0.354  Sum_probs=70.6

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchh---------c-------
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVV---------R-------  198 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~---------~-------  198 (339)
                      -|.|.+  |...|.....|.+|.-.-.-..-|+|+  .|+|.|.-..+|..|.|.|.-....-         .       
T Consensus       267 dyiCqL--CK~kYeD~F~LAQHrC~RIV~vEYrCP--EC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~  342 (500)
T KOG3993|consen  267 DYICQL--CKEKYEDAFALAQHRCPRIVHVEYRCP--ECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEV  342 (500)
T ss_pred             HHHHHH--HHHhhhhHHHHhhccCCeeEEeeecCC--cccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhh
Confidence            489999  999999999999996432222359999  99999999999999998774322111         0       


Q ss_pred             -cccc--eecCCCCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        199 -ILPM--TWCREKRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       199 -~~~~--~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                       .-.+  ....+-.|.|.+|+|.|++...|+.|+.+|+.
T Consensus       343 ~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  343 QEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             hhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence             0000  00223469999999999999999999888874

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.11  E-value=8.7e-07  Score=49.14  Aligned_cols=25  Identities=24%  Similarity=0.481  Sum_probs=22.7

Q ss_pred             ccccccccCCCCeEEeeccccccccCC
Q psy13347        123 FSCSLRTADRKKVHICHIEGCNKVYGK  149 (339)
Q Consensus       123 l~~h~~~h~~~~~~~C~~~~C~k~F~~  149 (339)
                      |.+|+++|+++++|.|++  |++.|.+
T Consensus         2 l~~H~~~H~~~k~~~C~~--C~k~F~~   26 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPY--CGKSFSN   26 (26)
T ss_dssp             HHHHHHHHSSSSSEEESS--SSEEESS
T ss_pred             HHHHhhhcCCCCCCCCCC--CcCeeCc
Confidence            788999999999999977  9999964

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.08  E-value=1.3e-06  Score=76.48  Aligned_cols=25  Identities=28%  Similarity=0.731  Sum_probs=21.0

Q ss_pred             CCCCcCCCccccccCChhHHHHHHH
Q psy13347        206 REKRFQCSECHKKFMRSDHLQKHIK  230 (339)
Q Consensus       206 ~~k~~~C~~C~k~F~~~~~L~~H~~  230 (339)
                      ..|||.|++|+|+|+....|+.|+.
T Consensus       395 ~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         395 KDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCCceeccccchhhccCccceeccc
Confidence            3689999999999999888888864

>PHA00616 hypothetical protein

Probab=98.00  E-value=2.1e-06  Score=53.15  Aligned_cols=33  Identities=15%  Similarity=0.292  Sum_probs=30.6

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      +|+|..  ||+.|..++.|.+|++.|+++++|.|+
T Consensus         1 pYqC~~--CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLR--CGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccch--hhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            589966  999999999999999999999999987

>PHA00732 hypothetical protein

Probab=97.99  E-value=5.1e-06  Score=59.33  Aligned_cols=51  Identities=22%  Similarity=0.428  Sum_probs=40.5

Q ss_pred             ceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        165 PFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       165 ~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ||.|.  .|++.|.+...|..|++.+             |.   ++.|+.|++.|.   .|..|++.+.+..
T Consensus         1 py~C~--~Cgk~F~s~s~Lk~H~r~~-------------H~---~~~C~~CgKsF~---~l~~H~~~~~~~~   51 (79)
T PHA00732          1 MFKCP--ICGFTTVTLFALKQHARRN-------------HT---LTKCPVCNKSYR---RLNQHFYSQYDIE   51 (79)
T ss_pred             CccCC--CCCCccCCHHHHHHHhhcc-------------cC---CCccCCCCCEeC---ChhhhhcccCCcc
Confidence            58898  9999999999999998531             22   368999999998   4888987766544

>PHA00616 hypothetical protein

Probab=97.93  E-value=4.8e-06  Score=51.59  Aligned_cols=28  Identities=21%  Similarity=0.506  Sum_probs=26.7

Q ss_pred             CcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ||+|..||+.|..+..|..|++.|++..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~   28 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQN   28 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCC
Confidence            6999999999999999999999999986

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.88  E-value=5.4e-06  Score=44.51  Aligned_cols=23  Identities=30%  Similarity=0.892  Sum_probs=21.2

Q ss_pred             cCCCccccccCChhHHHHHHHhh
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKTH  232 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~h  232 (339)
                      |.|+.|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.78  E-value=3e-05  Score=51.33  Aligned_cols=53  Identities=23%  Similarity=0.510  Sum_probs=37.2

Q ss_pred             ceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        165 PFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       165 ~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      .|.|+  +|++ ..+...|..|....+..            ..+.+.|++|...+.  .+|..|+..+++
T Consensus         2 ~f~CP--~C~~-~~~~~~L~~H~~~~H~~------------~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCP--YCGK-GFSESSLVEHCEDEHRS------------ESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCC--CCCC-ccCHHHHHHHHHhHCcC------------CCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            47898  8999 45567888887542221            135689999998655  388899887653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.57  E-value=3.7e-05  Score=41.42  Aligned_cols=24  Identities=42%  Similarity=0.901  Sum_probs=19.9

Q ss_pred             cCCCccccccCChhHHHHHHHhhc
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      |.|++|++.|.+...|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999999874

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.54  E-value=5.2e-05  Score=50.16  Aligned_cols=47  Identities=17%  Similarity=0.323  Sum_probs=37.1

Q ss_pred             CcCCCccccccCChhHHHHHHHh-hcCCC----CCccccccCCcccccccccccc
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKT-HSKTR----CTSLVMNFSDNTVVTEDSKLEL  258 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~-h~~~~----C~~C~~~f~~~~~l~~H~~~~~  258 (339)
                      .|.|++|++ ..+...|..|... |..+.    |++|...+.  .+|..|+..+|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            389999999 4556789999775 54433    999998765  48999998876

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.51  E-value=7.3e-05  Score=40.00  Aligned_cols=23  Identities=39%  Similarity=0.830  Sum_probs=18.2

Q ss_pred             EEeeccccccccCCchhHHHHHhhh
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      |.|.+  |++.|.++..|..|++.|
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhHC
Confidence            67855  888888888888888765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.43  E-value=5.6e-05  Score=42.22  Aligned_cols=26  Identities=35%  Similarity=0.779  Sum_probs=23.3

Q ss_pred             CcCCCccccccCChhHHHHHHHhhcC
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      +|.|..|++.|.+...|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            58999999999999999999998854

>KOG1146|consensus

Probab=97.27  E-value=0.00038  Score=72.18  Aligned_cols=126  Identities=17%  Similarity=0.231  Sum_probs=84.0

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHhh-h------------------------CCCCceecCccccCCccCChHHH
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLRW-H------------------------TGERPFVCTWQFCGKRFTRSDEL  183 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~-H------------------------~~~k~~~C~~~~C~~~f~~~~~L  183 (339)
                      .|+..+.|+|..  |+..|+....|..|||. |                        .+.++|.|.  .|...+..+..|
T Consensus       459 L~S~~kt~~cpk--c~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~--~C~~stttng~L  534 (1406)
T KOG1146|consen  459 LHSFFKTLKCPK--CNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCR--ACNYSTTTNGNL  534 (1406)
T ss_pred             eecccccccCCc--cchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccce--eeeeeeecchHH
Confidence            344557778855  88888888888888775 2                        124679998  999999999999


Q ss_pred             HhhhcccCcccch------hcccccee-----------------------cCCCCcCCCccccccCChhHHHHHHHh--h
Q psy13347        184 QVNGGRFGIERTV------VRILPMTW-----------------------CREKRFQCSECHKKFMRSDHLQKHIKT--H  232 (339)
Q Consensus       184 ~~H~~~~~~~~~~------~~~~~~~h-----------------------~~~k~~~C~~C~k~F~~~~~L~~H~~~--h  232 (339)
                      .+|+..-.....+      ...+.+.+                       ...-.|.|.+|++.-.-..+|+.||..  |
T Consensus       535 sihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~  614 (1406)
T KOG1146|consen  535 SIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPS  614 (1406)
T ss_pred             HHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCC
Confidence            9997531111110      00000000                       002358899999988888899999873  3


Q ss_pred             cCC-C-CCccccccCCcccccccccccc
Q psy13347        233 SKT-R-CTSLVMNFSDNTVVTEDSKLEL  258 (339)
Q Consensus       233 ~~~-~-C~~C~~~f~~~~~l~~H~~~~~  258 (339)
                      ... . |-.|...+.....+..+.+.+-
T Consensus       615 s~~p~~~Lq~~it~~l~~~~~~~~~lp~  642 (1406)
T KOG1146|consen  615 SSPPSLVLQQNITSSLASLLGGQGRLPF  642 (1406)
T ss_pred             CCChHHHhhhcchhhccccccCcCCCCC
Confidence            222 1 8888888888888888777763

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.15  E-value=0.00021  Score=53.51  Aligned_cols=73  Identities=21%  Similarity=0.400  Sum_probs=20.6

Q ss_pred             EeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccc
Q psy13347        137 ICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECH  216 (339)
Q Consensus       137 ~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~  216 (339)
                      +|.+  |+..|.....|..|+...++-.   .   .....+.....+..+.+               ..-...+.|.+|+
T Consensus         1 ~C~~--C~~~f~~~~~l~~H~~~~H~~~---~---~~~~~l~~~~~~~~~~~---------------~~~~~~~~C~~C~   57 (100)
T PF12756_consen    1 QCLF--CDESFSSVDDLLQHMKKKHGFD---I---PDQKYLVDPNRLLNYLR---------------KKVKESFRCPYCN   57 (100)
T ss_dssp             -----------------------------------------------------------------------SSEEBSSSS
T ss_pred             Cccc--cccccccccccccccccccccc---c---ccccccccccccccccc---------------cccCCCCCCCccC
Confidence            4767  8888888888888886533321   1   11111222233332221               0112358899999


Q ss_pred             cccCChhHHHHHHHhh
Q psy13347        217 KKFMRSDHLQKHIKTH  232 (339)
Q Consensus       217 k~F~~~~~L~~H~~~h  232 (339)
                      +.|.+...|..||+.+
T Consensus        58 ~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   58 KTFRSREALQEHMRSK   73 (100)
T ss_dssp             -EESSHHHHHHHHHHT
T ss_pred             CCCcCHHHHHHHHcCc
Confidence            9999999999999864

>smart00355 ZnF_C2H2 zinc finger

Probab=97.00  E-value=0.00064  Score=37.00  Aligned_cols=24  Identities=38%  Similarity=0.915  Sum_probs=21.8

Q ss_pred             cCCCccccccCChhHHHHHHHhhc
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999999775

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.96  E-value=0.00066  Score=36.31  Aligned_cols=23  Identities=43%  Similarity=0.839  Sum_probs=15.4

Q ss_pred             EEeeccccccccCCchhHHHHHhhh
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      |.|++  |++.|.+...|..|++.|
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHH
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhh
Confidence            56766  777777777777777765

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.82  E-value=0.00089  Score=37.22  Aligned_cols=25  Identities=36%  Similarity=0.599  Sum_probs=18.5

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhC
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      +|.|..  |++.|.+...|..|++.|.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHhc
Confidence            467765  8888888888888877664

>KOG2231|consensus

Probab=96.77  E-value=0.013  Score=57.81  Aligned_cols=44  Identities=25%  Similarity=0.646  Sum_probs=26.3

Q ss_pred             EeeccccccccCCchhHHHHHhhhCCCCceecCcccc------CCccCChHHHHhhhc
Q psy13347        137 ICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC------GKRFTRSDELQVNGG  188 (339)
Q Consensus       137 ~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C------~~~f~~~~~L~~H~~  188 (339)
                      .|.+  |...|.....|.+|++.++    |.|.  .|      +..|.....|..|-+
T Consensus       184 ~C~~--C~~~fld~~el~rH~~~~h----~~ch--fC~~~~~~neyy~~~~dLe~HfR  233 (669)
T KOG2231|consen  184 LCKF--CHERFLDDDELYRHLRFDH----EFCH--FCDYKTGQNEYYNDYDDLEEHFR  233 (669)
T ss_pred             cchh--hhhhhccHHHHHHhhccce----ehee--ecCcccccchhcccchHHHHHhh
Confidence            4655  7777777777777766543    4444  44      344556666666654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.67  E-value=0.00034  Score=52.38  Aligned_cols=48  Identities=23%  Similarity=0.421  Sum_probs=19.6

Q ss_pred             CCCccccccCChhHHHHHHHhhcCCC--------------------------CCccccccCCcccccccccccc
Q psy13347        211 QCSECHKKFMRSDHLQKHIKTHSKTR--------------------------CTSLVMNFSDNTVVTEDSKLEL  258 (339)
Q Consensus       211 ~C~~C~k~F~~~~~L~~H~~~h~~~~--------------------------C~~C~~~f~~~~~l~~H~~~~~  258 (339)
                      +|.+|+..|.....|..||...++..                          |..|++.|.+...|..|++.++
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            48888888888888888886544311                          9999999999999999999764

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.57  E-value=0.0013  Score=62.57  Aligned_cols=144  Identities=18%  Similarity=0.215  Sum_probs=89.2

Q ss_pred             Ccccccccccccccccccccccc--ccCCC--CeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChH
Q psy13347        106 NKIRLSSYFYPALISTLFSCSLR--TADRK--KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSD  181 (339)
Q Consensus       106 ~~~~c~~c~~~~~~~~~l~~h~~--~h~~~--~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~  181 (339)
                      ..+.|..|...+.....|.+|.+  .|+.+  +++.|.+..|++.|.+...+..|...|.+.+++.|.+..|.+.+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            46788889999999999999999  79998  899997224999999999999999999988888887666666665444


Q ss_pred             HHHhhhcccCcccchhccccceecCCCCcCCCc--cccccCChhHHHHHHHhhcCCC-----CCccccccCCcccccccc
Q psy13347        182 ELQVNGGRFGIERTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHIKTHSKTR-----CTSLVMNFSDNTVVTEDS  254 (339)
Q Consensus       182 ~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~-----C~~C~~~f~~~~~l~~H~  254 (339)
                      .-..+......         ..-...+.+.|..  |-..+.+...+..|...|....     +..|.+.|.....|..|+
T Consensus       368 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (467)
T COG5048         368 NNEPPQSLQQY---------KDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHK  438 (467)
T ss_pred             CCCCccchhhc---------cCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccc
Confidence            32111100000         0011122233322  4445555555555544443322     555555555555555555


Q ss_pred             cccc
Q psy13347        255 KLEL  258 (339)
Q Consensus       255 ~~~~  258 (339)
                      +.+.
T Consensus       439 ~~~~  442 (467)
T COG5048         439 KIHT  442 (467)
T ss_pred             cccc
Confidence            5554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.29  E-value=0.0031  Score=40.10  Aligned_cols=32  Identities=19%  Similarity=0.396  Sum_probs=22.8

Q ss_pred             cCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        205 CREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       205 ~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ..+.|-.|++|+..+.+..+|++|+.++++.+
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            35688999999999999999999998777643

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.24  E-value=0.0057  Score=54.77  Aligned_cols=105  Identities=23%  Similarity=0.393  Sum_probs=69.8

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhCCCCceecCccccC---CccC------ChHHHHhhhcccCcccchhccccceec
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCG---KRFT------RSDELQVNGGRFGIERTVVRILPMTWC  205 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~---~~f~------~~~~L~~H~~~~~~~~~~~~~~~~~h~  205 (339)
                      .|.|+...|.........|+.|.+.-++  .+-|.  +|-   +.|.      ++..|+.|..              .-.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~--~C~~nKk~F~~E~~lF~~~~Lr~H~~--------------~G~  212 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCS--ECIGNKKDFWNEIRLFRSSTLRDHKN--------------GGL  212 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhH--hhhcCcccCccceeeeeccccccccc--------------CCc
Confidence            4889877788888778899999886443  36676  663   2333      3344555532              111


Q ss_pred             CCCCc----CCCccccccCChhHHHHHHHhhcCCCCCccccc-------cCCcccccccccccc
Q psy13347        206 REKRF----QCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMN-------FSDNTVVTEDSKLEL  258 (339)
Q Consensus       206 ~~k~~----~C~~C~k~F~~~~~L~~H~~~h~~~~C~~C~~~-------f~~~~~l~~H~~~~~  258 (339)
                      .+..|    .|.+|.+.|-.-..|..|+|..+ ++|.+|++.       |++...|..|-+..|
T Consensus       213 ~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~H-E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h  275 (493)
T COG5236         213 EEEGFKGHPLCIFCKIYFYDDDELRRHCRLRH-EACHICDMVGPIRYQYFKSYEDLEAHFRNAH  275 (493)
T ss_pred             cccCcCCCchhhhccceecChHHHHHHHHhhh-hhhhhhhccCccchhhhhCHHHHHHHhhcCc
Confidence            12122    49999999999999999998544 458888764       666666777655433

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.20  E-value=0.0024  Score=34.34  Aligned_cols=24  Identities=25%  Similarity=0.717  Sum_probs=18.7

Q ss_pred             cCCCccccccCChhHHHHHHHhhcC
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      |+|+.|+.... +..|..|+++|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            68999998888 8899999998753

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.11  E-value=0.0023  Score=34.76  Aligned_cols=23  Identities=30%  Similarity=0.852  Sum_probs=20.1

Q ss_pred             cCCCccccccCChhHHHHHHHhh
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKTH  232 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~h  232 (339)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57999999999999999998754

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.74  E-value=0.012  Score=37.50  Aligned_cols=32  Identities=28%  Similarity=0.565  Sum_probs=20.4

Q ss_pred             CCCeEEeeccccccccCCchhHHHHHhhhCCCCc
Q psy13347        132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERP  165 (339)
Q Consensus       132 ~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~  165 (339)
                      .+.+..|++  |+..+....+|++|+..+++.||
T Consensus        21 S~~PatCP~--C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence            357788866  88888888888888887666655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.69  E-value=0.0045  Score=54.82  Aligned_cols=23  Identities=26%  Similarity=0.819  Sum_probs=11.8

Q ss_pred             CCceecCccccCCccCChHHHHhhh
Q psy13347        163 ERPFVCTWQFCGKRFTRSDELQVNG  187 (339)
Q Consensus       163 ~k~~~C~~~~C~~~f~~~~~L~~H~  187 (339)
                      .|||+|+  +|+|+|+....|+.|+
T Consensus       396 ~KPYrCe--vC~KRYKNlNGLKYHr  418 (423)
T COG5189         396 DKPYRCE--VCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CCceecc--ccchhhccCccceecc
Confidence            3555554  5555555555555543

>smart00355 ZnF_C2H2 zinc finger

Probab=95.50  E-value=0.0067  Score=32.76  Aligned_cols=24  Identities=38%  Similarity=0.643  Sum_probs=15.4

Q ss_pred             EEeeccccccccCCchhHHHHHhhhC
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      |.|..  |++.|.....|..|++.|.
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHHHhc
Confidence            35644  7777777777777766553

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.48  E-value=0.0055  Score=58.26  Aligned_cols=112  Identities=24%  Similarity=0.342  Sum_probs=79.3

Q ss_pred             CeEEeeccccccccCCchhHHHHHh--hhCCC--CceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLR--WHTGE--RPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKR  209 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~--~H~~~--k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~  209 (339)
                      .++.|..  |...|.....|.+|.+  .|.++  +++.|++..|++.|.+...+..|..              .|.+.++
T Consensus       288 ~~~~~~~--~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--------------~~~~~~~  351 (467)
T COG5048         288 LPIKSKQ--CNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHIL--------------LHTSISP  351 (467)
T ss_pred             cCCCCcc--ccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcc--------------cccCCCc
Confidence            4688866  9999999999999999  89999  9999986679999999999999986              4555555


Q ss_pred             cCCCc--cccccCChhHHH----HHH--HhhcCCC----CCccccccCCccccccccccccCCC
Q psy13347        210 FQCSE--CHKKFMRSDHLQ----KHI--KTHSKTR----CTSLVMNFSDNTVVTEDSKLELSGG  261 (339)
Q Consensus       210 ~~C~~--C~k~F~~~~~L~----~H~--~~h~~~~----C~~C~~~f~~~~~l~~H~~~~~~~~  261 (339)
                      +.|..  |.+.+.....-.    .+.  ..+....    =..|...+.+...+..|...+-...
T Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (467)
T COG5048         352 AKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFR  415 (467)
T ss_pred             cccccccCccccccccCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccC
Confidence            66544  555554443311    111  1111111    3467778888888888887776543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.48  E-value=0.011  Score=31.97  Aligned_cols=23  Identities=43%  Similarity=0.859  Sum_probs=17.2

Q ss_pred             EEeeccccccccCCchhHHHHHhhh
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      |.|.+  |++.|.....|..|++.+
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTTH
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCcC
Confidence            56777  888888888888887653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.12  E-value=0.0052  Score=34.13  Aligned_cols=22  Identities=36%  Similarity=0.901  Sum_probs=17.9

Q ss_pred             cCCCccccccCChhHHHHHHHh
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888888764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2231|consensus

Probab=95.03  E-value=0.089  Score=52.19  Aligned_cols=100  Identities=21%  Similarity=0.289  Sum_probs=59.9

Q ss_pred             cccccccccccccccccccccc-cCC---------CCeEEeeccccccccCCchhHHHHHhhh-CCCC----ceecCccc
Q psy13347        108 IRLSSYFYPALISTLFSCSLRT-ADR---------KKVHICHIEGCNKVYGKTSHLRAHLRWH-TGER----PFVCTWQF  172 (339)
Q Consensus       108 ~~c~~c~~~~~~~~~l~~h~~~-h~~---------~~~~~C~~~~C~k~F~~~~~L~~H~~~H-~~~k----~~~C~~~~  172 (339)
                      -.|..| -.|.....|+.|++. |..         .+.|.|    +.|.|. ...|..|++.- .+++    .-.|.  .
T Consensus       116 ~~~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~----e~k~Yt-~~el~~h~~~gd~d~~s~rGhp~C~--~  187 (669)
T KOG2231|consen  116 KECLHC-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFIN----ERKLYT-RAELNLHLMFGDPDDESCRGHPLCK--F  187 (669)
T ss_pred             CCCccc-cchhHHHHHHHHHHHhhhhhccccccccceeeee----eeeheh-HHHHHHHHhcCCCccccccCCccch--h
Confidence            344444 444456677777733 321         233333    445554 45677787642 1121    24688  9


Q ss_pred             cCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc------ccccCChhHHHHHHHhhc
Q psy13347        173 CGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC------HKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       173 C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C------~k~F~~~~~L~~H~~~h~  233 (339)
                      |...|.....|.+|++..+                  |.|.+|      +..|.....|..|.|.+|
T Consensus       188 C~~~fld~~el~rH~~~~h------------------~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  188 CHERFLDDDELYRHLRFDH------------------EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             hhhhhccHHHHHHhhccce------------------eheeecCcccccchhcccchHHHHHhhhcC
Confidence            9999999999999986422                  555555      345666777777777655

>PRK04860 hypothetical protein; Provisional

Probab=94.43  E-value=0.026  Score=46.11  Aligned_cols=40  Identities=25%  Similarity=0.505  Sum_probs=34.2

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChH
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSD  181 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~  181 (339)
                      -+|.|  . |++   ....+++|.++|.++++|.|.  .|+..|....
T Consensus       118 ~~Y~C--~-C~~---~~~~~rrH~ri~~g~~~YrC~--~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRC--K-CQE---HQLTVRRHNRVVRGEAVYRCR--RCGETLVFKG  157 (160)
T ss_pred             EEEEc--C-CCC---eeCHHHHHHHHhcCCccEECC--CCCceeEEec
Confidence            36999  4 987   677899999999999999999  9999887543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.12  E-value=0.034  Score=29.76  Aligned_cols=22  Identities=32%  Similarity=0.582  Sum_probs=13.9

Q ss_pred             EEeeccccccccCCchhHHHHHhhh
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      |+|..  |+.... ...|..|++.|
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHH
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhh
Confidence            56755  777776 77777777764

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.95  E-value=0.046  Score=29.70  Aligned_cols=21  Identities=43%  Similarity=0.839  Sum_probs=17.6

Q ss_pred             cCCCccccccCChhHHHHHHHh
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      ..|+.||+.| ....|..|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 66788899875

>PRK04860 hypothetical protein; Provisional

Probab=93.41  E-value=0.043  Score=44.89  Aligned_cols=37  Identities=11%  Similarity=0.301  Sum_probs=31.5

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC---CCccccccCCcc
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNFSDNT  248 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~---C~~C~~~f~~~~  248 (339)
                      -+|.|. |++   ....+++|.++|++++   |..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            469998 998   7778999999999877   999999987643

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.19  E-value=0.026  Score=31.22  Aligned_cols=22  Identities=23%  Similarity=0.733  Sum_probs=13.7

Q ss_pred             EEeeccccccccCCchhHHHHHhh
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLRW  159 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~~  159 (339)
                      |.|.+  |++.|.+...|..|++.
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTS
T ss_pred             CCccc--CCCCcCCHHHHHHHHcc
Confidence            45655  66666666666666653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146|consensus

Probab=92.54  E-value=0.066  Score=56.35  Aligned_cols=115  Identities=15%  Similarity=0.247  Sum_probs=83.5

Q ss_pred             cccccCCchhHHHHHh-hhCCCCceecCccccCCccCChHHHHhhhcccCcc-cch----hccccc------eecCCCCc
Q psy13347        143 CNKVYGKTSHLRAHLR-WHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIE-RTV----VRILPM------TWCREKRF  210 (339)
Q Consensus       143 C~k~F~~~~~L~~H~~-~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~-~~~----~~~~~~------~h~~~k~~  210 (339)
                      |+..|.++..+..|+. .|.-.+.|+|+  .|+..|+....|..|||..+.. +..    ...|.+      .-.+.++|
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~~kt~~cp--kc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~  519 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSFFKTLKCP--KCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPY  519 (1406)
T ss_pred             hhhhhhhhcccccceeeeecccccccCC--ccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcc
Confidence            5556666666666655 46666889999  9999999999999999873222 111    111111      12345789


Q ss_pred             CCCccccccCChhHHHHHHHh--hcCC--------------------------------------C------CCcccccc
Q psy13347        211 QCSECHKKFMRSDHLQKHIKT--HSKT--------------------------------------R------CTSLVMNF  244 (339)
Q Consensus       211 ~C~~C~k~F~~~~~L~~H~~~--h~~~--------------------------------------~------C~~C~~~f  244 (339)
                      .|..|...|..+.+|..|+..  |..+                                      +      |..|++.-
T Consensus       520 ~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yet  599 (1406)
T KOG1146|consen  520 PCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYET  599 (1406)
T ss_pred             cceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchh
Confidence            999999999999999999873  3211                                      0      99999999


Q ss_pred             CCccccccccccccC
Q psy13347        245 SDNTVVTEDSKLELS  259 (339)
Q Consensus       245 ~~~~~l~~H~~~~~~  259 (339)
                      .-..+|+.||...+.
T Consensus       600 niarnlrihmtss~~  614 (1406)
T KOG1146|consen  600 NIARNLRIHMTASPS  614 (1406)
T ss_pred             hhhhccccccccCCC
Confidence            999999999886543

>KOG2893|consensus

Probab=92.49  E-value=0.049  Score=46.43  Aligned_cols=44  Identities=30%  Similarity=0.676  Sum_probs=31.9

Q ss_pred             ccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHH-HHhhc
Q psy13347        172 FCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKH-IKTHS  233 (339)
Q Consensus       172 ~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H-~~~h~  233 (339)
                      +|++.|....-|..|++                  .|-|+|.+|.|..-+--.|..| |++|.
T Consensus        15 ycnrefddekiliqhqk------------------akhfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   15 YCNREFDDEKILIQHQK------------------AKHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             ecccccchhhhhhhhhh------------------hccceeeeehhhhccCCCceeehhhhhh
Confidence            78888888888887774                  3568888888776666667666 45553

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.08  E-value=0.093  Score=30.81  Aligned_cols=22  Identities=27%  Similarity=0.631  Sum_probs=20.0

Q ss_pred             CcCCCccccccCChhHHHHHHH
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIK  230 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~  230 (339)
                      +|.|++|++.|.....+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4889999999999999999986

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4124|consensus

Probab=91.88  E-value=0.057  Score=48.64  Aligned_cols=66  Identities=17%  Similarity=0.345  Sum_probs=45.4

Q ss_pred             CCceecCccccCCccCChHHHHhhhcccCc-c----cchhccccceecCCCCcCCCccccccCChhHHHHH
Q psy13347        163 ERPFVCTWQFCGKRFTRSDELQVNGGRFGI-E----RTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKH  228 (339)
Q Consensus       163 ~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~-~----~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H  228 (339)
                      .++|+|+++.|.+.++....|+.|...-|. .    ...-+.|.......|+|.|++|.++++....|.-|
T Consensus       347 ~~~~~~~vp~~~~~~~n~ng~~~~~~~~h~s~i~~~s~~~~ph~~~~~~nk~~r~~i~~~~~k~~~~l~~~  417 (442)
T KOG4124|consen  347 DKPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKRYKNLNGLKYH  417 (442)
T ss_pred             cCCCCCCCCcchhhcccCcceeeccccCcCCCCCCCCCCCCCcceeeeccCcccChhhhhhhccCCCCCce
Confidence            457899989999999998888888643221 1    11234444455567889999998888776666544

>KOG2482|consensus

Probab=91.73  E-value=0.2  Score=45.15  Aligned_cols=134  Identities=17%  Similarity=0.196  Sum_probs=85.9

Q ss_pred             cccccccccCC-CCeEEeeccccccccC-CchhHHHHHh-hhCC---------------------CCceecCccccCCcc
Q psy13347        122 LFSCSLRTADR-KKVHICHIEGCNKVYG-KTSHLRAHLR-WHTG---------------------ERPFVCTWQFCGKRF  177 (339)
Q Consensus       122 ~l~~h~~~h~~-~~~~~C~~~~C~k~F~-~~~~L~~H~~-~H~~---------------------~k~~~C~~~~C~~~f  177 (339)
                      .|..+++.-.+ ....+|-+  |...+. ..+.+..|+- +|.-                     -..+.|-  .|.+.|
T Consensus       130 aLeqqQ~Eredt~fslqClF--Cn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CL--yCekif  205 (423)
T KOG2482|consen  130 ALEQQQKEREDTIFSLQCLF--CNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCL--YCEKIF  205 (423)
T ss_pred             HHHHHHHHhcCCeeeeEEEE--ecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheee--eecccc
Confidence            44444443322 24567988  987664 3455666654 3421                     1147999  999999


Q ss_pred             CChHHHHhhhcccCccc--ch---------------------hcccc--ce---e------------cCCCC--cCCCcc
Q psy13347        178 TRSDELQVNGGRFGIER--TV---------------------VRILP--MT---W------------CREKR--FQCSEC  215 (339)
Q Consensus       178 ~~~~~L~~H~~~~~~~~--~~---------------------~~~~~--~~---h------------~~~k~--~~C~~C  215 (339)
                      ..+..|+.||+.....+  +.                     ...+-  -+   +            .+..+  .+|-+|
T Consensus       206 rdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC  285 (423)
T KOG2482|consen  206 RDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFC  285 (423)
T ss_pred             CCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEee
Confidence            99999999996321111  00                     00000  00   0            00122  489999


Q ss_pred             ccccCChhHHHHHHHhhcCC------------------------------CCCccccccCCccccccccccccC
Q psy13347        216 HKKFMRSDHLQKHIKTHSKT------------------------------RCTSLVMNFSDNTVVTEDSKLELS  259 (339)
Q Consensus       216 ~k~F~~~~~L~~H~~~h~~~------------------------------~C~~C~~~f~~~~~l~~H~~~~~~  259 (339)
                      ....-+...|..||++-+.-                              +|..|...|-....|..||..+..
T Consensus       286 ~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~k~  359 (423)
T KOG2482|consen  286 TNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVEDKH  359 (423)
T ss_pred             ccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccccc
Confidence            99999999999999864421                              099999999999999999987643

>KOG2785|consensus

Probab=89.72  E-value=0.49  Score=43.49  Aligned_cols=49  Identities=20%  Similarity=0.177  Sum_probs=42.6

Q ss_pred             CcCCCccccccCChhHHHHHHHhhcCCC--------------------------CCccc---cccCCccccccccccc
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKTHSKTR--------------------------CTSLV---MNFSDNTVVTEDSKLE  257 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~h~~~~--------------------------C~~C~---~~f~~~~~l~~H~~~~  257 (339)
                      |-.|-+|++.|..-..-..||..+++..                          |-.|.   +.|.+....+.||...
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~K  243 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRDK  243 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhhc
Confidence            4679999999999999999999998854                          88888   9999999999998753

>KOG2482|consensus

Probab=89.68  E-value=0.21  Score=45.03  Aligned_cols=94  Identities=22%  Similarity=0.409  Sum_probs=64.4

Q ss_pred             eEEeeccccccccCCchhHHHHHhh--hCCCC------------------------------------------------
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRW--HTGER------------------------------------------------  164 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~--H~~~k------------------------------------------------  164 (339)
                      .+.|-+  |.|.|..+..|+.|||.  |....                                                
T Consensus       195 r~~CLy--CekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~e  272 (423)
T KOG2482|consen  195 RLRCLY--CEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNE  272 (423)
T ss_pred             hheeee--eccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhc
Confidence            478988  99999999999999984  53210                                                


Q ss_pred             ----c--eecCccccCCccCChHHHHhhhcccCcccch-------------hccccceecCCCCcCCCccccccCChhHH
Q psy13347        165 ----P--FVCTWQFCGKRFTRSDELQVNGGRFGIERTV-------------VRILPMTWCREKRFQCSECHKKFMRSDHL  225 (339)
Q Consensus       165 ----~--~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~-------------~~~~~~~h~~~k~~~C~~C~k~F~~~~~L  225 (339)
                          +  .+|-  .|.....+...|..||+.-|.-.-.             ++....+-...+.-.|-.|.-.|.....|
T Consensus       273 d~a~a~~v~CL--fC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l  350 (423)
T KOG2482|consen  273 DDAEALSVVCL--FCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGL  350 (423)
T ss_pred             CCCCccceEEE--eeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchh
Confidence                1  4788  9999999999999999753321100             00000011112335678899999999999


Q ss_pred             HHHHHhh
Q psy13347        226 QKHIKTH  232 (339)
Q Consensus       226 ~~H~~~h  232 (339)
                      ..||..+
T Consensus       351 ~~hm~e~  357 (423)
T KOG2482|consen  351 LIHMVED  357 (423)
T ss_pred             hhhcccc
Confidence            9999754

>KOG4173|consensus

Probab=88.62  E-value=0.051  Score=45.29  Aligned_cols=51  Identities=25%  Similarity=0.602  Sum_probs=35.6

Q ss_pred             EeeccccccccCCchhHHHHHh-hh---------CCCCceecCccccCCccCChHHHHhhhcc
Q psy13347        137 ICHIEGCNKVYGKTSHLRAHLR-WH---------TGERPFVCTWQFCGKRFTRSDELQVNGGR  189 (339)
Q Consensus       137 ~C~~~~C~k~F~~~~~L~~H~~-~H---------~~~k~~~C~~~~C~~~f~~~~~L~~H~~~  189 (339)
                      .|.+  |.+.|.+...|..|+. .|         .|..-|.|-.+.|+..|.+....+.|+-.
T Consensus       108 sCs~--C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  108 SCSF--CKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             hhHH--HHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHH
Confidence            5766  7788877777777765 33         33445777777788888877777777643

>smart00451 ZnF_U1 U1-like zinc finger

Probab=87.24  E-value=0.43  Score=27.85  Aligned_cols=22  Identities=27%  Similarity=0.668  Sum_probs=14.6

Q ss_pred             eEEeeccccccccCCchhHHHHHh
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLR  158 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~  158 (339)
                      +|.|.+  |++.|.....+..|++
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHC
Confidence            366766  7777776666666665

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=85.95  E-value=0.14  Score=42.67  Aligned_cols=92  Identities=20%  Similarity=0.393  Sum_probs=66.4

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      ...|.|.+.+|-..|........|...-++   -.|.  .|.+.|.+...|..|+...|...-    ...+..|.-.|+|
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs--~C~r~~Pt~hLLd~HI~E~HDs~F----qa~veRG~dMy~C  147 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCS--FCKRAFPTGHLLDAHILEWHDSLF----QALVERGQDMYQC  147 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhccc---chhH--HHHHhCCchhhhhHHHHHHHHHHH----HHHHHcCccHHHH
Confidence            356889999999999988888888764322   3798  999999999999999743221100    0012234567999


Q ss_pred             Cc--cccccCChhHHHHHHHhhc
Q psy13347        213 SE--CHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       213 ~~--C~k~F~~~~~L~~H~~~h~  233 (339)
                      -+  |+..|.+...-+.|+-.-+
T Consensus       148 lvEgCt~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  148 LVEGCTEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             HHHhhhhhhhhhhhhhhHHHHhc
Confidence            65  9999999999999976433

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=84.35  E-value=0.18  Score=43.43  Aligned_cols=41  Identities=20%  Similarity=0.372  Sum_probs=29.3

Q ss_pred             CCCcCCCccccccCChhHHHHHHHh---hcCCC---------------CCccccccCCc
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKT---HSKTR---------------CTSLVMNFSDN  247 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~---h~~~~---------------C~~C~~~f~~~  247 (339)
                      +|.+.|++|++.|.++.-+....++   .....               |+.||..|...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            3668999999999988766655543   11111               99999988754

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=84.16  E-value=0.43  Score=30.96  Aligned_cols=30  Identities=20%  Similarity=0.441  Sum_probs=25.4

Q ss_pred             cCCCCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        205 CREKRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       205 ~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      -|+.-+.|+-||..|....++.+|...-++
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            467779999999999999999999876554

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=84.03  E-value=2.1  Score=38.89  Aligned_cols=117  Identities=21%  Similarity=0.288  Sum_probs=67.3

Q ss_pred             cccccccccccCCCCeEEeeccccc---cccC------CchhHHHHHhhhCCCCc----eecCccccCCccCChHHHHhh
Q psy13347        120 STLFSCSLRTADRKKVHICHIEGCN---KVYG------KTSHLRAHLRWHTGERP----FVCTWQFCGKRFTRSDELQVN  186 (339)
Q Consensus       120 ~~~l~~h~~~h~~~~~~~C~~~~C~---k~F~------~~~~L~~H~~~H~~~k~----~~C~~~~C~~~f~~~~~L~~H  186 (339)
                      -..|+.|.+..++  .+.|.+  |-   +.|.      ++..|+.|...-..+.-    -.|.  .|...|...+.|.+|
T Consensus       166 ~k~lk~H~K~~H~--~~~C~~--C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~--FC~~~FYdDDEL~~H  239 (493)
T COG5236         166 LKELKKHYKAQHG--FVLCSE--CIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCI--FCKIYFYDDDELRRH  239 (493)
T ss_pred             HHHHHHHHHhhcC--cEEhHh--hhcCcccCccceeeeecccccccccCCccccCcCCCchhh--hccceecChHHHHHH
Confidence            4455666555332  355655  63   2232      34567777664322212    2577  888888888888888


Q ss_pred             hcccCcccchhccccceecCCCCcCCCcccc-------ccCChhHHHHHHHhhc-CC---CCCcc-ccccCCcccccccc
Q psy13347        187 GGRFGIERTVVRILPMTWCREKRFQCSECHK-------KFMRSDHLQKHIKTHS-KT---RCTSL-VMNFSDNTVVTEDS  254 (339)
Q Consensus       187 ~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k-------~F~~~~~L~~H~~~h~-~~---~C~~C-~~~f~~~~~l~~H~  254 (339)
                      ++.                  +--.|-+|++       .|.....|..|.+.-+ --   .|-.- -..|.....|..|+
T Consensus       240 cR~------------------~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy~ct~qtc~~~k~~vf~~~~el~~h~  301 (493)
T COG5236         240 CRL------------------RHEACHICDMVGPIRYQYFKSYEDLEAHFRNAHYCCTFQTCRVGKCYVFPYHTELLEHL  301 (493)
T ss_pred             HHh------------------hhhhhhhhhccCccchhhhhCHHHHHHHhhcCceEEEEEEEecCcEEEeccHHHHHHHH
Confidence            852                  2234555544       4777788888876322 10   02211 24688888888887


Q ss_pred             ccccCC
Q psy13347        255 KLELSG  260 (339)
Q Consensus       255 ~~~~~~  260 (339)
                      ..-|..
T Consensus       302 ~~~h~~  307 (493)
T COG5236         302 TRFHKV  307 (493)
T ss_pred             HHHhhc
Confidence            776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	339
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		4e-18
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-16
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-16
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-15
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		8e-13
1va1_A	37	Solution Structure Of Transcription Factor Sp1 Dna		2e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-10
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		9e-10
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		7e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-08
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-08
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-08
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		4e-08
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		1e-06
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		5e-06
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-05
1sp2_A	31	Nmr Structure Of A Zinc Finger Domain From Transcri		3e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-05
1va3_A	29	Solution Structure Of Transcription Factor Sp1 Dna		2e-04
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		3e-04
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		4e-04
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		6e-04
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		9e-04
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		6e-04
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-04

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 14/102 (13%)
Query: 131 DRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRF 190
           +++++H C   GC KVY K+SHL+AHLR HTGE+P+ CTW+ C  RF RSDEL     R 
Sbjct: 11  EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELT----RH 66
Query: 191 GIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
             + T            K FQC  C++ F RSDHL  H+K H
Sbjct: 67  YRKHTGA----------KPFQCGVCNRSFSRSDHLALHMKRH 98

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           R   H C   GC K Y K+SHL+AHLR HTGE+P+ C W  CG +F RSDEL  +  +  
Sbjct: 3   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 62
Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
             R               FQC +C + F RSDHL  H+K H
Sbjct: 63  GHRP--------------FQCQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           R   H C   GC K Y K+SHL+AHLR HTGE+P+ C W  CG +F RSDEL  +  +  
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
             R               FQC +C + F RSDHL  H+K H
Sbjct: 62  GHRP--------------FQCQKCDRAFSRSDHLALHMKRH 88

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 14/104 (13%)
Query: 130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGR 189
           A  K+  +C   GCNK Y K SHL+ H R HTGE+P+ C ++ C +RF+RSD+L+ +   
Sbjct: 1   ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRH--- 57
Query: 190 FGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHS 233
              +R    + P        FQC  C +KF RSDHL+ H +TH+
Sbjct: 58  ---QRRHTGVKP--------FQCKTCQRKFSRSDHLKTHTRTHT 90

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 39/54 (72%)
Query: 130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDEL 183
           + R + HIC   GC K Y K+SHL+AH R HTGE+PF C+W+ C +RF RSDEL
Sbjct: 12  SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDEL 65

>pdb|1VA1|A Chain A, Solution Structure Of Transcription Factor Sp1 Dna Binding Domain (Zinc Finger 1) Length = 37

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/33 (87%), Positives = 31/33 (93%)
Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER 164
           +KK HICHI+GC KVYGKTSHLRAHLRWHTGER
Sbjct: 5   KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 16/90 (17%)
Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM 202
           C K + ++S+L+ H R HTGE+P+ C    CGK F++S +LQ +      +RT       
Sbjct: 10  CGKSFSQSSNLQKHQRTHTGEKPYKCPE--CGKSFSQSSDLQKH------QRTHTG---- 57
Query: 203 TWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
               EK ++C EC K F RSDHL +H +TH
Sbjct: 58  ----EKPYKCPECGKSFSRSDHLSRHQRTH 83

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM 202
           C K + + +HLRAH R HTGE+P+ C    CGK F+R D L  +                
Sbjct: 111 CGKSFSQLAHLRAHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQ--------------R 154
Query: 203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHS 233
           T   EK ++C EC K F R D L  H +TH+
Sbjct: 155 THTGEKPYKCPECGKSFSRRDALNVHQRTHT 185

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIE 193
           +VH+C    C K + ++S L+ H   HTGE+PF CT++ CGKRF+    L          
Sbjct: 33  RVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL---------- 80
Query: 194 RTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
           RT VRI   T  R        C+KKF +S +L+ HI TH+K +
Sbjct: 81  RTHVRI--HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGI 192
           ++ + C +E C++ +  +S+L  H+R HTG++PF C  + C + F+RSD L         
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQC--RICMRNFSRSDHLT-------- 51
Query: 193 ERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
             T +R    T   EK F C  C +KF RSD  ++H K H
Sbjct: 52  --THIR----THTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGI 192
           ++ + C +E C++ + +++ L  H+R HTG++PF C  + C + F+RSD L         
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQC--RICMRNFSRSDHLT-------- 51
Query: 193 ERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
             T +R    T   EK F C  C +KF RSD  ++H K H
Sbjct: 52  --THIR----THTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGI 192
           ++ + C +E C++ + +++ L  H+R HTG++PF C  + C + F+RSD L         
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQC--RICMRNFSRSDHLT-------- 51
Query: 193 ERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
             T +R    T   EK F C  C +KF RSD  ++H K H
Sbjct: 52  --THIR----THTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGI 192
           ++ + C +E C++ + ++  L  H+R HTG++PF C  + C + F+RSD L         
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLT-------- 51
Query: 193 ERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
             T +R    T   EK F C  C +KF RSD  ++H K H
Sbjct: 52  --THIR----THTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGI 192
           ++ + C +E C++ + ++  L  H+R HTG++PF C  + C + F+RSD L         
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLT-------- 50
Query: 193 ERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
             T +R    T   EK F C  C +KF RSD  ++H K H
Sbjct: 51  --THIR----THTGEKPFACDICGRKFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGI 192
           ++ + C +E C++ + ++  L  H+R HTG++PF C  + C + F+RSD L         
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLT-------- 51
Query: 193 ERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
             T +R    T   EK F C  C +KF RSD  ++H K H
Sbjct: 52  --THIR----THTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 16/100 (16%)
Query: 133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGI 192
           ++ + C +E C++ + ++  L  H+R HTG++PF C  + C + F+RSD L         
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLT-------- 51
Query: 193 ERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
             T +R    T   EK F C  C +KF RSD  ++H K H
Sbjct: 52  --THIR----THTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 116 PALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGK 175
           P     +    +R    +K H C  EGC K Y +  +L+ HLR HTGE+P++C  + C K
Sbjct: 48  PFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK 107
Query: 176 RFTR-SDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKT 231
            F+  SD  +        E+  V  LP             C K++     L+KH+KT
Sbjct: 108 AFSNASDRAKHQNRTHSNEKPYVCKLPG------------CTKRYTDPSSLRKHVKT 152

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 136 HICHIEGC---NKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGI 192
           H+C+ E C    K +     L  H+R HTGE+PF C +  CGK F RS+ L+++      
Sbjct: 58  HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK----- 112
Query: 193 ERTVVRILPMTWCREKRFQC--SECHKKFMRSDHLQKHIKTHSKTR 236
                     T   EK F+C    C ++F  S   +KH+  H+  +
Sbjct: 113 ---------RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 14/70 (20%)
Query: 164 RPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSD 223
           RP+ C  + C +RF+RSDEL  +          +RI       +K FQC  C + F RSD
Sbjct: 18  RPYACPVESCDRRFSRSDELTRH----------IRI----HTGQKPFQCRICMRNFSRSD 63
Query: 224 HLQKHIKTHS 233
           HL  HI+TH+
Sbjct: 64  HLTTHIRTHT 73

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM 202
           C + + ++ HL  H+R HTGE+PF C    CG++F RSDE + +       R +  ILP+
Sbjct: 9   CMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRH-------RDIQHILPI 59

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 22/94 (23%)
Query: 141 EGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDEL----QVNGGRFGIERTV 196
           E C K++    HL  H   H+GE+P+ C    CG RF R D +    + + G  G     
Sbjct: 11  EICGKIFRDVYHLNRHKLSHSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVG----- 63
Query: 197 VRILPMTWCREKRFQCSECHKKFMRSDHLQKHIK 230
                      K + C  C K F R DHL  HIK
Sbjct: 64  -----------KPYICQSCGKGFSRPDHLNGHIK 86

>pdb|1SP2|A Chain A, Nmr Structure Of A Zinc Finger Domain From Transcription Factor Sp1f2, Minimized Average Structure Length = 31

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 164 RPFVCTWQFCGKRFTRSDELQ 184
           RPF+CTW +CGKRFTRSDELQ
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQ 21

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERT------- 195
           C+K +    +L+ H R HTGE+PF C    CGK + R + L  +  R  + R+       
Sbjct: 13  CHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCS 70
Query: 196 ----------VVRILPMTWCREKRFQCSECHKKFMRSDHLQKH-IKTHS 233
                      +R+  ++   E  ++CS C ++FM+   LQ H IK HS
Sbjct: 71  VCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>pdb|1VA3|A Chain A, Solution Structure Of Transcription Factor Sp1 Dna Binding Domain (Zinc Finger 3) Length = 29

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/26 (73%), Positives = 21/26 (80%)
Query: 208 KRFQCSECHKKFMRSDHLQKHIKTHS 233
           K+F C EC K+FMRSDHL KHIKTH 
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQ 26

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 16/98 (16%)
Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIE 193
           K +IC    C   Y K   L+AHL  HTGE+PF C  + C K FT    L  +       
Sbjct: 2   KRYICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRH------- 54
Query: 194 RTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHI 229
                   +T   EK F C    C  +F    +++KH 
Sbjct: 55  -------SLTHTGEKNFTCDSDGCDLRFTTKANMKKHF 85

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 135 VHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQ 184
           +++CH E C K + K + L+ H   HT + P+ C  + C KRF+    L+
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLK 50

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 135 VHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQ 184
           V++CH E C K + K + L+ H   HT + P+ C  + C KRF+    L+
Sbjct: 104 VYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLK 153

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIE 193
           K +IC    C   Y K   L+AHL  HTGE+PF C  + C K FT    L  +       
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS------ 64
Query: 194 RTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSD 246
                   +T   EK F C    C  +F    +++KH       +    V +F +
Sbjct: 65  --------LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFEN 111

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 19/108 (17%)
Query: 163 ERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRS 222
           ++ F+C  +FCG+ FT+S  L ++      ERT     P T        C  CHK F R 
Sbjct: 15  KKEFIC--KFCGRHFTKSYNLLIH------ERTHTDERPYT--------CDICHKAFRRQ 58
Query: 223 DHLQKHIKTHSKT---RCTSLVMNFSDNTVVTEDSKLELSGGSTGAGT 267
           DHL+ H   HSK    +C      F  +  +     L +   S  A +
Sbjct: 59  DHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAAS 106

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGI 192
           ++ + C +E C++ + + ++L  H+R HTG++PF C  + C + F++   L  +      
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQC--RICMRNFSQQASLNAH------ 53
Query: 193 ERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
               +R    T   EK F C  C +KF       +H K H
Sbjct: 54  ----IR----THTGEKPFACDICGRKFATLHTRTRHTKIH 85

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	339
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-45
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-44
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-31
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-14
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-27
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-25
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-21
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-16
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-19
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-13
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-12
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-13
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-17
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-13
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	1e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-15
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-15
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-14
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-12
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-09
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-06
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	1e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-07
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	2e-11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	9e-11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-09
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	4e-09
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	3e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-07
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic} Len	1e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	4e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	6e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	5e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	4e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	6e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	9e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	7e-04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	8e-04
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	8e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-04

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  149 bits (378), Expect = 2e-45
 Identities = 48/110 (43%), Positives = 62/110 (56%), Gaps = 14/110 (12%)

Query: 123 FSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDE 182
              S    +++++H C   GC KVY K+SHL+AHLR HTGE+P+ CTW+ C  RF RSDE
Sbjct: 3   SGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDE 62

Query: 183 LQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
           L  +       R        T    K FQC  C++ F RSDHL  H+K H
Sbjct: 63  LTRH------YRK------HT--GAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score =  146 bits (370), Expect = 3e-44
 Identities = 45/101 (44%), Positives = 55/101 (54%), Gaps = 14/101 (13%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG 191
           R   H C   GC K Y K+SHL+AHLR HTGE+P+ C W  CG +F RSDEL  +     
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH----- 56

Query: 192 IERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
             R        T    + FQC +C + F RSDHL  H+K H
Sbjct: 57  -YRK------HT--GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 206 REKRFQCSECHKKFMRSDHLQKHIKTHS 233
                  + C K + +S HL+ H++TH+
Sbjct: 4   ATHTCDYAGCGKTYTKSSHLKAHLRTHT 31

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score =  112 bits (281), Expect = 2e-31
 Identities = 33/65 (50%), Positives = 42/65 (64%)

Query: 120 STLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTR 179
           S+  S     + R + HIC   GC K Y K+SHL+AH R HTGE+PF C+W+ C +RF R
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 180 SDELQ 184
           SDEL 
Sbjct: 62  SDELS 66

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 65.1 bits (159), Expect = 6e-14
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 16/85 (18%)

Query: 150 TSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKR 209
           +S         +  R  +C+   CGK + +S  L+ +           R    T   EK 
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAH----------TR----THTGEKP 47

Query: 210 FQCS--ECHKKFMRSDHLQKHIKTH 232
           F CS   C ++F RSD L +H +TH
Sbjct: 48  FSCSWKGCERRFARSDELSRHRRTH 72

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score =  100 bits (252), Expect = 6e-27
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 15/99 (15%)

Query: 135 VHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIER 194
           +++CH E C K + K + L+ H   HT + P+ C  + C KRF+    L+ +      E+
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH------EK 54

Query: 195 TVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIK-TH 232
                           +   C           KH+   H
Sbjct: 55  V------HA--GYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 11/50 (22%), Positives = 16/50 (32%), Gaps = 2/50 (4%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDEL 183
             + C  EGC+K +   S L+ H + H G          C          
Sbjct: 30  LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD--DSCSFVGKTWTLY 77

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 96.6 bits (241), Expect = 1e-25
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 16/85 (18%)

Query: 149 KTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREK 208
             ++L  ++      RP+ C  + C +RF+RSDEL  +          +R        +K
Sbjct: 5   PMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRH----------IR----IHTGQK 48

Query: 209 RFQCSECHKKFMRSDHLQKHIKTHS 233
            FQC  C + F RSDHL  HI+TH+
Sbjct: 49  PFQCRICMRNFSRSDHLTTHIRTHT 73

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 87.2 bits (217), Expect = 2e-21
 Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 24/104 (23%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV-----NGG 188
           +  +C   GCNK Y K SHL+ H R HTGE+P+ C ++ C +RF+RSD+L+       G 
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG- 63

Query: 189 RFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
                              K FQC  C +KF RSDHL+ H +TH
Sbjct: 64  ------------------VKPFQCKTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 72.2 bits (178), Expect = 5e-16
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 18/97 (18%)

Query: 138 CHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVV 197
           C  + C + + ++  L+ H R HTG +PF C    C ++F+RSD L+ +       RT  
Sbjct: 39  CDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK--TCQRKFSRSDHLKTH------TRT-- 88

Query: 198 RILPMTWCREKRFQCS--ECHKKFMRSDHLQKHIKTH 232
                T   EK F C    C KKF RSD L +H   H
Sbjct: 89  ----HT--GEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 55.2 bits (134), Expect = 7e-10
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 16/74 (21%)

Query: 161 TGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS--ECHKK 218
           + +RPF+C +  C KR+ +   LQ++       R        T   EK +QC   +C ++
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMH------SRK------HT--GEKPYQCDFKDCERR 47

Query: 219 FMRSDHLQKHIKTH 232
           F RSD L++H + H
Sbjct: 48  FSRSDQLKRHQRRH 61

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 83.4 bits (207), Expect = 1e-19
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 15/102 (14%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIE 193
           K H C  EGC K Y +  +L+ HLR HTGE+P++C  + C K F+ + +   +  R    
Sbjct: 66  KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR---- 121

Query: 194 RTVVRILPMTWCREKRFQC--SECHKKFMRSDHLQKHIKTHS 233
                    T   EK + C    C K++     L+KH+KT  
Sbjct: 122 ---------THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 30/112 (26%)

Query: 133 KKVHICHIEGCN---KVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV---- 185
           +K  +CH  GC+   + +     L  H+R HTGE+P  CT++ C K ++R + L+     
Sbjct: 32  RKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS 91

Query: 186 -NGGRFGIERTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHIK-THS 233
             G                   EK + C    C K F  +    KH   THS
Sbjct: 92  HTG-------------------EKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 63.8 bits (156), Expect = 1e-12
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 32/108 (29%)

Query: 138 CHIEGCNKVYGKTSHLRAHL---RWHTGERPFVCTWQFC---GKRFTRSDELQV-----N 186
           C  +GC++ +     L  H+     H   + FVC W  C    + F     L V      
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 187 GGRFGIERTVVRILPMTWCREKRFQC--SECHKKFMRSDHLQKHIKTH 232
           G                   EK  +C    C K + R ++L+ H+++H
Sbjct: 64  G-------------------EKPHKCTFEGCRKSYSRLENLKTHLRSH 92

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 77.5 bits (192), Expect = 3e-18
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 16/95 (16%)

Query: 138 CHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVV 197
           C +E C++ + ++  L  H+R HTG++PF C    C + F+RSD L  +       RT  
Sbjct: 7   CPVESCDRRFSQSGSLTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTH------IRT-- 56

Query: 198 RILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
                T   EK F C  C +KF RSD  ++H K H
Sbjct: 57  ----HT--GEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.4 bits (132), Expect = 6e-10
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 14/70 (20%)

Query: 163 ERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRS 222
           ERP+ C  + C +RF++S  L  +          +RI   T   +K FQC  C + F RS
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRH----------IRI--HT--GQKPFQCRICMRNFSRS 47

Query: 223 DHLQKHIKTH 232
           DHL  HI+TH
Sbjct: 48  DHLTTHIRTH 57

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 79.2 bits (196), Expect = 9e-18
 Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 16/101 (15%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIE 193
           K +IC    C   Y K   L+AHL  HTGE+PF C  + C K FT    L  +       
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRH------S 64

Query: 194 RTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHIKTH 232
            T       T   EK F C    C  +F    +++KH    
Sbjct: 65  LT------HT--GEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 13/95 (13%)

Query: 138 CHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVV 197
           CH E C K + K + L+ H   HT + P+ C  + C KRF+    L+ +      E+   
Sbjct: 107 CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH------EKVHA 160

Query: 198 RILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
                    +K   CS   K +  + +L+   + H
Sbjct: 161 GYPC-----KKDDSCSFVGKTW--TLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 66.1 bits (162), Expect = 4e-13
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 18/99 (18%)

Query: 138 CHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIER--T 195
           C  EGC K +    HL  H   HTGE+ F C    C  RFT    ++ +           
Sbjct: 45  CKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKH------FNRFH 98

Query: 196 VVRILPMTWCREKRFQCS--ECHKKFMRSDHLQKHIKTH 232
            ++I          + C    C K F + + L+ H  +H
Sbjct: 99  NIKICV--------YVCHFENCGKAFKKHNQLKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 57.6 bits (140), Expect = 4e-10
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 26/85 (30%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIERTVVRILPMTWCREKR 209
                    + ++C++  CG  + ++ +LQ       G                   EK 
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTG-------------------EKP 42

Query: 210 FQCSE--CHKKFMRSDHLQKHIKTH 232
           F C E  C K F    HL +H  TH
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRHSLTH 67

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 74.5 bits (184), Expect = 8e-17
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 18/101 (17%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIE 193
           +VH+C    C K + ++S L+ H   HTGE+PF CT++ CGKRF+    L          
Sbjct: 33  RVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL---------- 80

Query: 194 RTVVRILPMTWCREKRFQCS--ECHKKFMRSDHLQKHIKTH 232
           RT VRI   T   ++ + C    C+KKF +S +L+ HI TH
Sbjct: 81  RTHVRI--HT--GDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 64.8 bits (159), Expect = 3e-13
 Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 29/108 (26%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV-----N 186
             +   C  +GC K++   S +R HL  H G R  VC    CGK F  S +L+       
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHT 58

Query: 187 GGRFGIERTVVRILPMTWCREKRFQCS--ECHKKFMRSDHLQKHIKTH 232
           G                   EK FQC+   C K+F    +L+ H++ H
Sbjct: 59  G-------------------EKPFQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 8/29 (27%), Positives = 18/29 (62%)

Query: 138 CHIEGCNKVYGKTSHLRAHLRWHTGERPF 166
           C  +GCNK + ++++L++H+  H   +  
Sbjct: 95  CPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 71.2 bits (175), Expect = 1e-16
 Identities = 29/33 (87%), Positives = 31/33 (93%)

Query: 132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER 164
           +KK HICHI+GC KVYGKTSHLRAHLRWHTGER
Sbjct: 5   KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 71.0 bits (175), Expect = 4e-16
 Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 14/77 (18%)

Query: 158 RWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHK 217
               GE  + C    C + +T       +                     K + C  C K
Sbjct: 3   FTKEGEHTYRCK--VCSRVYTHISNFCRH----------YVTSHKR--NVKVYPCPFCFK 48

Query: 218 KFMRSDHLQKHIKTHSK 234
           +F R D++  H+K   K
Sbjct: 49  EFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 6/53 (11%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLR--WHTGERPFVCTWQFCGKRFTRSDELQ 184
             + C +  C++VY   S+   H         + + C +  C K FTR D + 
Sbjct: 9   HTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMT 57

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 6/29 (20%), Positives = 12/29 (41%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHSKT 235
           E  ++C  C + +    +  +H  T  K 
Sbjct: 8   EHTYRCKVCSRVYTHISNFCRHYVTSHKR 36

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 69.3 bits (170), Expect = 1e-15
 Identities = 17/30 (56%), Positives = 20/30 (66%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQ 184
           +     TGE+PF CTW  CG RF+RSDEL 
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELS 31

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 45.8 bits (109), Expect = 2e-07
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 127 LRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT 169
             +   +K   C   GC   + ++  L  H R H+G +P   +
Sbjct: 4   GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 71.9 bits (177), Expect = 1e-15
 Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 29/111 (26%)

Query: 133 KKVHICHIEGCN---KVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV---- 185
           +  H+C+ E C    K +     L  H+R HTGE+PF C +  CGK F RS+ L++    
Sbjct: 55  QNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT 114

Query: 186 -NGGRFGIERTVVRILPMTWCREKRFQCS--ECHKKFMRSDHLQKHIKTHS 233
             G                   EK F+C    C ++F  S   +KH+  H+
Sbjct: 115 HTG-------------------EKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 29/128 (22%), Positives = 42/128 (32%), Gaps = 36/128 (28%)

Query: 119 ISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPF----VCTWQFC- 173
           I    SC     + +       + C++ +     L  H+       P     VC W+ C 
Sbjct: 10  IKQELSC-KWIDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP 66

Query: 174 --GKRFTRSDELQV-----NGGRFGIERTVVRILPMTWCREKRFQCS--ECHKKFMRSDH 224
             GK F    +L        G                   EK F C    C K F RS++
Sbjct: 67  REGKSFKAKYKLVNHIRVHTG-------------------EKPFPCPFPGCGKIFARSEN 107

Query: 225 LQKHIKTH 232
           L+ H +TH
Sbjct: 108 LKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 55.8 bits (135), Expect = 9e-10
 Identities = 12/91 (13%), Positives = 21/91 (23%), Gaps = 7/91 (7%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM 202
                       +       +         C + F+   EL  +     +          
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHS 233
            W      +C    K F     L  HI+ H+
Sbjct: 61  YW-----EECPREGKSFKAKYKLVNHIRVHT 86

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT 169
           K   C  EGC++ +  +S  + H+  HT ++    +
Sbjct: 119 KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 68.3 bits (168), Expect = 6e-15
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 20/93 (21%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM 202
           C + + ++ HL  H+R HTGE+PF C    CG++F RSDE + +                
Sbjct: 9   CMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDERKRH------RDI------- 53

Query: 203 TWCREKRFQCSECHKKFMRSDHLQKHI---KTH 232
                      +  +   ++ HL+  +   K  
Sbjct: 54  --QHILPILEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 40.2 bits (95), Expect = 7e-05
 Identities = 15/25 (60%), Positives = 17/25 (68%)

Query: 208 KRFQCSECHKKFMRSDHLQKHIKTH 232
           K FQC  C + F RSDHL  HI+TH
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTH 26

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 67.9 bits (167), Expect = 7e-15
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 14/81 (17%)

Query: 152 HLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQ 211
              +  R H+GE+P+ C    C  RFT+S  ++++                      +F 
Sbjct: 2   SSGSSGRTHSGEKPYECY--ICHARFTQSGTMKMH------ILQ------KHTENVAKFH 47

Query: 212 CSECHKKFMRSDHLQKHIKTH 232
           C  C     R   L  H++  
Sbjct: 48  CPHCDTVIARKSDLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.1 bits (118), Expect = 4e-08
 Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 4/45 (8%)

Query: 143 CNKVYGKTSHLRAHLRWHTGE--RPFVCTWQFCGKRFTRSDELQV 185
           C+  + ++  ++ H+     E    F C    C     R  +L V
Sbjct: 21  CHARFTQSGTMKMHILQKHTENVAKFHCP--HCDTVIARKSDLGV 63

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 67.9 bits (167), Expect = 1e-14
 Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 15/92 (16%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM 202
           C K++    HL  H   H+GE+P+ C    CG RF R D +  +          VR    
Sbjct: 13  CGKIFRDVYHLNRHKLSHSGEKPYSCP--VCGLRFKRKDRMSYH----------VRS--H 58

Query: 203 TWCREKRFQCSECHKKFMRSDHLQKHIK-THS 233
                K + C  C K F R DHL  HIK  HS
Sbjct: 59  DGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 17/78 (21%), Positives = 25/78 (32%), Gaps = 26/78 (33%)

Query: 160 HTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIERTVVRILPMTWCREKRFQCSE 214
            +G     C    CGK F     L       +G                   EK + C  
Sbjct: 2   SSGSSGVACE--ICGKIFRDVYHLNRHKLSHSG-------------------EKPYSCPV 40

Query: 215 CHKKFMRSDHLQKHIKTH 232
           C  +F R D +  H+++H
Sbjct: 41  CGLRFKRKDRMSYHVRSH 58

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 9/27 (33%), Positives = 11/27 (40%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
                C  C K F    HL +H  +HS
Sbjct: 5   SSGVACEICGKIFRDVYHLNRHKLSHS 31

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 68.3 bits (168), Expect = 2e-14
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM 202
           C+K +    +L+ H R HTGE+PF C    CGK + R + L  +  R  + R        
Sbjct: 13  CHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNR-------- 62

Query: 203 TWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
               E+ F CS C + F R   L+ H+ +H
Sbjct: 63  ---SEQVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 61.4 bits (150), Expect = 5e-12
 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 30/100 (30%)

Query: 143 CNKVYGKTSHLRAHLRW---HTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIER 194
           C K Y +  +L  H      +  E+ F C+   C + F R  EL++      G       
Sbjct: 41  CGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRRRMELRLHMVSHTG------- 91

Query: 195 TVVRILPMTWCREKRFQCSECHKKFMRSDHLQKH-IKTHS 233
                       E  ++CS C ++FM+   LQ H IK HS
Sbjct: 92  ------------EMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 16/69 (23%)

Query: 160 HTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKF 219
            +G     C    C K+F     L+V+       R        T   EK F+C +C K +
Sbjct: 2   SSGSSGVECPT--CHKKFLSKYYLKVH------NRK------HT--GEKPFECPKCGKCY 45

Query: 220 MRSDHLQKH 228
            R ++L +H
Sbjct: 46  FRKENLLEH 54

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
               +C  CHKKF+   +L+ H + H
Sbjct: 5   SSGVECPTCHKKFLSKYYLKVHNRKH 30

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 64.9 bits (159), Expect = 7e-14
 Identities = 14/87 (16%), Positives = 27/87 (31%), Gaps = 15/87 (17%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLR-WHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGI 192
               C   GC +++    +L  H +  H  ++ F C    CGK F     L+ +      
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH------ 59

Query: 193 ERTVVRILPMTWCREKRFQCSECHKKF 219
            +        +    + + C       
Sbjct: 60  MKL------HS--DTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 63.0 bits (154), Expect = 5e-13
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 15/76 (19%)

Query: 160 HTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE--CHK 217
            +G     C +  CG+ F+    L  +           +        +K F C E  C K
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHH----------KKY---QHIHQKSFSCPEPACGK 48

Query: 218 KFMRSDHLQKHIKTHS 233
            F    HL++H+K HS
Sbjct: 49  SFNFKKHLKEHMKLHS 64

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 63.6 bits (156), Expect = 3e-13
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 26/95 (27%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIERTVV 197
           C K + ++S L  HL  H+  RP+ C  Q+CGKRF +  +++       G          
Sbjct: 7   CGKSFKRSSTLSTHLLIHSDTRPYPC--QYCGKRFHQKSDMKKHTFIHTG---------- 54

Query: 198 RILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
                    EK  +C  C K F +S +L  H + H
Sbjct: 55  ---------EKPHKCQVCGKAFSQSSNLITHSRKH 80

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 63.6 bits (156), Expect = 5e-13
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 16/83 (19%)

Query: 151 SHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRF 210
           S           ++ F+C  +FCG+ FT+S  L ++      ERT       T   E+ +
Sbjct: 3   SGSSGGRLPSKTKKEFIC--KFCGRHFTKSYNLLIH------ERT------HT--DERPY 46

Query: 211 QCSECHKKFMRSDHLQKHIKTHS 233
            C  CHK F R DHL+ H   HS
Sbjct: 47  TCDICHKAFRRQDHLRDHRYIHS 69

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 63.6 bits (156), Expect = 6e-13
 Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 26/95 (27%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIERTVV 197
           C + + K+ +L  H R HT ERP+ C    C K F R D L+      +           
Sbjct: 23  CGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSK---------- 70

Query: 198 RILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
                    EK F+C EC K F +S  L  H   H
Sbjct: 71  ---------EKPFKCQECGKGFCQSRTLAVHKTLH 96

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 65.5 bits (161), Expect = 6e-13
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 16/90 (17%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM 202
           C K + + ++LRAH R HTGE+P+ C    CGK F++   L+ +      +RT       
Sbjct: 83  CGKSFSQRANLRAHQRTHTGEKPYACPE--CGKSFSQLAHLRAH------QRT------H 128

Query: 203 TWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
           T   EK ++C EC K F R D+L  H +TH
Sbjct: 129 T--GEKPYKCPECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 64.0 bits (157), Expect = 2e-12
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 26/95 (27%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIERTVV 197
           C K + ++ HL  H R HTGE+P+ C    CGK F+   +L        G          
Sbjct: 27  CGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTG---------- 74

Query: 198 RILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
                    EK ++C EC K F +  +L+ H +TH
Sbjct: 75  ---------EKPYKCPECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 63.6 bits (156), Expect = 3e-12
 Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 26/95 (27%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIERTVV 197
           C K + + +HLRAH R HTGE+P+ C    CGK F+R D L        G          
Sbjct: 111 CGKSFSQLAHLRAHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQRTHTG---------- 158

Query: 198 RILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
                    EK ++C EC K F R D L  H +TH
Sbjct: 159 ---------EKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 63.2 bits (155), Expect = 3e-12
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 16/90 (17%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM 202
           C K +     L  H R HTGE+P+ C    CGK F++   L+ +      +RT       
Sbjct: 55  CGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLRAH------QRT------H 100

Query: 203 TWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
           T   EK + C EC K F +  HL+ H +TH
Sbjct: 101 T--GEKPYACPECGKSFSQLAHLRAHQRTH 128

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 60.1 bits (147), Expect = 5e-11
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 16/82 (19%)

Query: 151 SHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRF 210
           S   A      GE+P+ C    CGK F+RSD L  +      +RT       T   EK +
Sbjct: 7   SSSVAQAALEPGEKPYACPE--CGKSFSRSDHLAEH------QRT------HT--GEKPY 50

Query: 211 QCSECHKKFMRSDHLQKHIKTH 232
           +C EC K F     L +H +TH
Sbjct: 51  KCPECGKSFSDKKDLTRHQRTH 72

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 62.4 bits (153), Expect = 1e-12
 Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 26/95 (27%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIERTVV 197
           C K + +   L+ H+R HTG +P+ C  + C      S  L       +           
Sbjct: 14  CGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSD---------- 61

Query: 198 RILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
                    E+ F+C  C      S  L  H+++H
Sbjct: 62  ---------ERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 50.9 bits (123), Expect = 1e-08
 Identities = 19/79 (24%), Positives = 27/79 (34%), Gaps = 26/79 (32%)

Query: 160 HTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIERTVVRILPMTWCREKRFQCSE 214
                P  C  + CGK F+R D+L+       G                    K ++C  
Sbjct: 3   SGSSGPHKC--EVCGKCFSRKDKLKTHMRCHTG-------------------VKPYKCKT 41

Query: 215 CHKKFMRSDHLQKHIKTHS 233
           C      S  L KH++ HS
Sbjct: 42  CDYAAADSSSLNKHLRIHS 60

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 38.2 bits (90), Expect = 4e-04
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVC 168
           C      +S L  HLR HTG+     
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDSGPSS 95

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 12/81 (14%)

Query: 152 HLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQ 211
              +  R HTGE+P+ C+   C K F +   L ++           +           F 
Sbjct: 2   SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMH----------FKRYHDPNFVPAAFV 49

Query: 212 CSECHKKFMRSDHLQKHIKTH 232
           CS+C K F R + + +H    
Sbjct: 50  CSKCGKTFTRRNTMARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 13/81 (16%), Positives = 23/81 (28%), Gaps = 20/81 (24%)

Query: 143 CNKVYGKTSHLRAHLRWHTGE----RPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVR 198
           C+K + +   L  H + +         FVC+   CGK FTR + +  +            
Sbjct: 21  CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARH------ADN--- 69

Query: 199 ILPMTWCREKRFQCSECHKKF 219
                       +        
Sbjct: 70  ---CA--GPDGVEGENSGPSS 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 60.5 bits (148), Expect = 6e-12
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 16/92 (17%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM 202
           C K +   S    H+  H G RP+ C    CGK+F     L  +       +        
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGH------MKI------H 60

Query: 203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHSK 234
           T    K ++C+ C K+FM  D   +H+ + +K
Sbjct: 61  T--GIKPYECNICAKRFMWRDSFHRHVTSCTK 90

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 53.6 bits (130), Expect = 2e-09
 Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 18/83 (21%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM 202
           C K +    HL  H++ HTG +P+ C    C KRF   D                     
Sbjct: 43  CGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWRDSF--------HRHV------T 86

Query: 203 TWCREKRFQCSECHKKFMRSDHL 225
           +    K ++ ++  +    +   
Sbjct: 87  S--CTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 51.3 bits (124), Expect = 1e-08
 Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 27/81 (33%)

Query: 158 RWHTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIERTVVRILPMTWCREKRFQC 212
              +G++ + C    CGK FT   +         G                    + + C
Sbjct: 3   SGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLG-------------------LRPYGC 40

Query: 213 SECHKKFMRSDHLQKHIKTHS 233
             C KKF    HL  H+K H+
Sbjct: 41  GVCGKKFKMKHHLVGHMKIHT 61

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.4 bits (145), Expect = 8e-12
 Identities = 21/90 (23%), Positives = 30/90 (33%), Gaps = 26/90 (28%)

Query: 148 GKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIERTVVRILPM 202
           G +             R + C    CGK F+ S +L        G               
Sbjct: 1   GSSGSSGRSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTG--------------- 43

Query: 203 TWCREKRFQCSECHKKFMRSDHLQKHIKTH 232
               EK ++C EC K F++  HL  H + H
Sbjct: 44  ----EKPYKCDECGKAFIQRSHLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.7 bits (107), Expect = 1e-06
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDEL 183
           C K +  +S L  H R HTGE+P+ C    CGK F +   L
Sbjct: 24  CGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHL 62

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A Length = 29

 Score = 57.6 bits (139), Expect = 1e-11
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 209 RFQCSECHKKFMRSDHLQKHIKTHSKTR 236
           +F C EC K+FMRSDHL  HI  H   +
Sbjct: 2   KFACPECPKRFMRSDHLTLHILLHENKK 29

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 58.6 bits (143), Expect = 1e-11
 Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 26/87 (29%)

Query: 151 SHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV-----NGGRFGIERTVVRILPMTWC 205
            H   H      ++P+ C    C   F     L        G                  
Sbjct: 3   HHHHHHSHMTHSDKPYKC--DRCQASFRYKGNLASHKTVHTG------------------ 42

Query: 206 REKRFQCSECHKKFMRSDHLQKHIKTH 232
            EK ++C+ C  +F R  +L+ H + H
Sbjct: 43  -EKPYRCNICGAQFNRPANLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 46.3 bits (111), Expect = 3e-07
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
           C   +    +L +H   HTGE+P+ C    CG +F R   L+ 
Sbjct: 23  CQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKT 63

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 Length = 33

 Score = 57.2 bits (138), Expect = 2e-11
 Identities = 16/28 (57%), Positives = 18/28 (64%)

Query: 209 RFQCSECHKKFMRSDHLQKHIKTHSKTR 236
           +F C EC K+FMRSDHL KHI  H    
Sbjct: 2   KFACPECPKRFMRSDHLSKHITLHELLG 29

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 56.0 bits (136), Expect = 9e-11
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQ 184
           C + + +  HL+ H R HT E+P+ C    C + FTR D L 
Sbjct: 8   CTRAFARQEHLKRHYRSHTNEKPYPCG--LCNRAFTRRDLLI 47

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 208 KRFQCSECHKKFMRSDHLQKHIKTH 232
           + F C  C + F R +HL++H ++H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 56.3 bits (136), Expect = 9e-11
 Identities = 14/74 (18%), Positives = 20/74 (27%), Gaps = 15/74 (20%)

Query: 160 HTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCR-EKRFQCSECHKK 218
            +G     C    CG    +   L  +           R           RF C  C K+
Sbjct: 2   SSGSSGLQCE--ICGFTCRQKASLNWH----------QRK--HAETVAALRFPCEFCGKR 47

Query: 219 FMRSDHLQKHIKTH 232
           F + D +  H    
Sbjct: 48  FEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 48.2 bits (115), Expect = 9e-08
 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 7/53 (13%)

Query: 136 HICHIEGCNKVYGKTSHLRAHLRWHT---GERPFVCTWQFCGKRFTRSDELQV 185
             C I  C     + + L  H R H        F C   FCGKRF + D +  
Sbjct: 8   LQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCE--FCGKRFEKPDSVAA 56

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 7/30 (23%), Positives = 11/30 (36%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
               QC  C     +   L  H + H++T 
Sbjct: 5   SSGLQCEICGFTCRQKASLNWHQRKHAETV 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 55.0 bits (133), Expect = 1e-10
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
            K FQC +C + F RSDHL  H K H
Sbjct: 9   IKPFQCPDCDRSFSRSDHLALHRKRH 34

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 53.2 bits (129), Expect = 1e-09
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 22/84 (26%)

Query: 153 LRAHLRWHTGERPFVCTWQFCGKRFTRSDEL---QVNGGRFGIERTVVRILPMTWCREKR 209
                  H+GE+P+ C    CGK F+RS  L   Q             R+   T   EK 
Sbjct: 2   SSGSSGIHSGEKPYGCVE--CGKAFSRSSILVQHQ-------------RV--HT--GEKP 42

Query: 210 FQCSECHKKFMRSDHLQKHIKTHS 233
           ++C EC K F ++  L  H + H+
Sbjct: 43  YKCLECGKAFSQNSGLINHQRIHT 66

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 46.3 bits (111), Expect = 3e-07
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDEL 183
           C K + ++S L  H R HTGE+P+ C    CGK F+++  L
Sbjct: 20  CGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGL 58

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 52.7 bits (126), Expect = 1e-09
 Identities = 18/86 (20%), Positives = 24/86 (27%), Gaps = 23/86 (26%)

Query: 148 GKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCRE 207
           G +       + H G+R   C+   CG  F R   L                      R 
Sbjct: 1   GSSGSSGKRQKIHLGDRSQKCS--KCGIIFIRRSTL---------------------SRR 37

Query: 208 KRFQCSECHKKFMRSDHLQKHIKTHS 233
           K   C +C K   +   L K     S
Sbjct: 38  KTPMCEKCRKDSCQEAALNKDEGNES 63

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 50.3 bits (121), Expect = 4e-09
 Identities = 18/21 (85%), Positives = 20/21 (95%)

Query: 164 RPFVCTWQFCGKRFTRSDELQ 184
           RPF+CTW +CGKRFTRSDELQ
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQ 21

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 39.5 bits (93), Expect = 3e-05
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)

Query: 208 KRFQCS--ECHKKFMRSDHLQKHIKTHS 233
           + F C+   C K+F RSD LQ+H +TH+
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHT 28

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 16/75 (21%)

Query: 158 RWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHK 217
              +   P  C+   C    +    L+++      ER          C ++ F+C+ C  
Sbjct: 2   SSGSSGHPEKCS--ECSYSCSSKAALRIH------ERI--------HCTDRPFKCNYCSF 45

Query: 218 KFMRSDHLQKHIKTH 232
              +  +L KH+K  
Sbjct: 46  DTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQ 184
           C+      + LR H R H  +RPF C +  C     +   L 
Sbjct: 15  CSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLS 54

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic} Length = 32

 Score = 46.2 bits (109), Expect = 1e-07
 Identities = 15/22 (68%), Positives = 16/22 (72%)

Query: 210 FQCSECHKKFMRSDHLQKHIKT 231
           F C  C K+FMRSD L KHIKT
Sbjct: 3   FACPACPKRFMRSDALSKHIKT 24

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 44.9 bits (107), Expect = 5e-07
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 3/37 (8%)

Query: 143 CNKVYGKTSHLRAHLRW-HTGERPFVCTWQFCGKRFT 178
           C K + +  HL  H++  HT ERP  C  Q      +
Sbjct: 18  CGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 19/62 (30%)

Query: 160 HTGERPFVCTWQFCGKRFTRSDELQVNGGRF--GIERTVVRILPMTWCREKRFQCSECHK 217
            +  +P++C  Q CGK F+R D L  +  +                   E+  +C     
Sbjct: 7   GSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTS---------------ERPHKCQVWVS 49

Query: 218 KF 219
             
Sbjct: 50  GP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 206 REKRFQCSECHKKFMRSDHLQKHIK-THS 233
             K + C  C K F R DHL  HIK  H+
Sbjct: 9   VGKPYICQSCGKGFSRPDHLNGHIKQVHT 37

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 46.1 bits (109), Expect = 6e-07
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 131 DRKKVHICHIEGCNKVYGKT----SHLRAHLRWHTGERPFVCT 169
             +  H+C+ E C +  GK+      L  H+R HTGE+    +
Sbjct: 53  PEQNNHVCYWEECPR-EGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 8/77 (10%)

Query: 158 RW-HTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECH 216
           +W    +       + C + F+   EL  +     +    V             +C    
Sbjct: 17  KWIDEAQLS--RPKKSCDRTFSTMHELVTH-----VTMEHVGGPEQNNHVCYWEECPREG 69

Query: 217 KKFMRSDHLQKHIKTHS 233
           K F     L  HI+ H+
Sbjct: 70  KSFKAKYKLVNHIRVHT 86

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 37.6 bits (87), Expect = 7e-04
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 7/55 (12%)

Query: 138 CHIEGCNKVYGKTSHLRAHL-RWHTGERP---FVCTWQFC---GKRFTRSDELQV 185
              + C++ +     L  H+   H G       VC W+ C   GK F    +L  
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 43.8 bits (103), Expect = 1e-06
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVC 168
            +   +K   C I  C K++    HL  H   H+GE+P+  
Sbjct: 5   SSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +G+ SHL  HL+ H  E+    +
Sbjct: 18  CGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           E+ + C+EC K F R  HL +H+K H 
Sbjct: 10  ERPYGCNECGKNFGRHSHLIEHLKRHF 36

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%)

Query: 156 HLRWHTGERPFVCTWQFCGKRFTRSDELQ 184
                +GERP+ C    CGK F R   L 
Sbjct: 3   SGSSGSGERPYGCNE--CGKNFGRHSHLI 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 41.9 bits (99), Expect = 4e-06
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
           + F C  C + F R +HL++H ++H+  +
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 44.0 bits (103), Expect = 6e-06
 Identities = 15/103 (14%), Positives = 26/103 (25%), Gaps = 23/103 (22%)

Query: 151 SHLRAHLRWHTGERPFVCTWQFCGKRFTRSDEL--------------------QVNGGRF 190
           S  + +    TG   F C    C   +    EL                           
Sbjct: 5   SSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 191 GIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHS 233
             +R+++  +      +K  +C  C   F     L  H+    
Sbjct: 63  PRKRSLLE-MEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +G+ SHL  HLR H+ E+    +
Sbjct: 18  CGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           E+ F+C+EC K F R  HL  H++ HS
Sbjct: 10  ERPFKCNECGKGFGRRSHLAGHLRLHS 36

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVC 168
           C K + +  HL  H R HTGER    
Sbjct: 18  CRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           +K ++C EC K F++  HL +H + H+
Sbjct: 10  KKPYECKECRKTFIQIGHLNQHKRVHT 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK ++C  C  +F++  HL+ H+  H
Sbjct: 9   EKPYKCETCGARFVQVAHLRAHVLIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPF 166
           C   + + +HLRAH+  HTG  P 
Sbjct: 17  CGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 156 HLRWHTGERPFVCTWQFCGKRFTRSDELQ 184
                 GE+P+ C  + CG RF +   L+
Sbjct: 2   SSGSSGGEKPYKC--ETCGARFVQVAHLR 28

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + + SHL +H R HTGE+P   +
Sbjct: 18  CGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK FQC EC K+F ++ HL  H + H
Sbjct: 10  EKPFQCEECGKRFTQNSHLHSHQRVH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + ++SHL+ H R HTGE+P   +
Sbjct: 18  CGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK ++C  C K+F +S HLQ H + H
Sbjct: 10  EKCYKCDVCGKEFSQSSHLQTHQRVH 35

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.0 bits (95), Expect = 5e-05
 Identities = 22/118 (18%), Positives = 36/118 (30%), Gaps = 21/118 (17%)

Query: 128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNG 187
              + K+V+ C +  CN          +H R        VC   +C  RF   +  Q + 
Sbjct: 9   SPVENKEVYQCRL--CNAKLSSLLEQGSHERLC--RNAAVC--PYCSLRFFSPELKQEHE 62

Query: 188 GRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFS 245
            +               C  K+  C EC + F  S  + +H          +     S
Sbjct: 63  SK---------------CEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSGPS 105

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C KV+ + SHL  H R HTG +P   +
Sbjct: 18  CGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 11/26 (42%), Positives = 18/26 (69%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK ++C+EC K F ++ HL +H + H
Sbjct: 10  EKPYKCNECGKVFTQNSHLARHRRVH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + + SHL  H R HTGE+P   +
Sbjct: 18  CGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK + C+EC K F++  HL +H + H
Sbjct: 10  EKPYICNECGKSFIQKSHLNRHRRIH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
           +     TGE+P++C    CGK F +   L  
Sbjct: 2   SSGSSGTGEKPYICNE--CGKSFIQKSHLNR 30

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C KV+ + SHL  H R HTGE+P   +
Sbjct: 18  CGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.5 bits (96), Expect = 6e-05
 Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 23/122 (18%)

Query: 119 ISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER---PFVCTWQFCGK 175
           +  L      T ++K++    ++       +     ++L      +    FVC    C  
Sbjct: 26  LEELKRYHQLTPEQKRLIRAIVKTLIHN-PQLLDESSYLYRLLASKAISQFVC--PLCLM 82

Query: 176 RFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHI-KTHSK 234
            F+ S  L          +  +R        E    C  C K+F  +D    H+ K H+ 
Sbjct: 83  PFSSSVSL----------KQHIRY------TEHTKVCPVCKKEFTSTDSALDHVCKKHNI 126

Query: 235 TR 236
             
Sbjct: 127 CV 128

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + + S L +H R HTGE+P   +
Sbjct: 18  CGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK F+C EC K+F ++  L  H + H
Sbjct: 10  EKPFKCEECGKRFTQNSQLHSHQRVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 156 HLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
                +GE+PF C  + CGKRFT++ +L  
Sbjct: 3   SGSSGSGEKPFKC--EECGKRFTQNSQLHS 30

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 7e-05
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + + +HL  H R HTG RP   +
Sbjct: 18  CGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK ++CSEC K F R  HL +H + H
Sbjct: 10  EKPYKCSECGKAFHRHTHLNEHRRIH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C KV+ + SHL  H R HTG +P   +
Sbjct: 18  CGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +  ++HL  HLR HT E     +
Sbjct: 18  CGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK + C+ C K F+ S HL +H++ H
Sbjct: 10  EKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + +  HL +HLR HTGE+P   +
Sbjct: 18  CGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK F+C EC K F ++ HL  H++ H
Sbjct: 10  EKPFKCKECGKAFRQNIHLASHLRIH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + +++HL  H R HTGE+P   +
Sbjct: 18  CGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + + S L  H + HTGER    +
Sbjct: 18  CGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 156 HLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
                TGE+P+ C+   CGK FTR   L +
Sbjct: 3   SGSSGTGEKPYKCSD--CGKAFTRKSGLHI 30

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C KV+ + SHL  H   HTGE+P   +
Sbjct: 18  CGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           +K ++C+EC K F ++ HL +H   H
Sbjct: 10  KKPYKCNECGKVFTQNSHLARHRGIH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +     L  H R HT E+P   +
Sbjct: 18  CEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C+K + + +HL  H + HTGE+P   +
Sbjct: 18  CSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK ++C  C K F +  HL +H KTH
Sbjct: 10  EKPYECKVCSKAFTQKAHLAQHQKTH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C KV+ + SHL  H   HTGE+P   +
Sbjct: 18  CGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK ++C+EC K F ++ HL +H   H
Sbjct: 10  EKPYKCNECGKVFTQNSHLARHRGIH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 3/32 (9%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCG 174
           C K +   S   +H R H+GE+P   +    G
Sbjct: 18  CGKGFYTNSQCYSHQRSHSGEKPSGPS---SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           EK F+C EC K F  +     H ++HS
Sbjct: 10  EKPFKCEECGKGFYTNSQCYSHQRSHS 36

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
           +     +GE+PF C  + CGK F  + +   
Sbjct: 2   SSGSSGSGEKPFKC--EECGKGFYTNSQCYS 30

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + +T+HL  H R HTGE+P   +
Sbjct: 18  CGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.3 bits (89), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 21/33 (63%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTS 239
           E  F+CS+C + F + ++L +H +TH++    S
Sbjct: 10  ENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS 42

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C KV+ + SHL  H   HTGE+P   +
Sbjct: 18  CGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 6e-04
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK ++C+EC K F ++ HL +H   H
Sbjct: 10  EKPYKCNECGKVFTQNSHLVRHRGIH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + + S L  H + HTGE+P   +
Sbjct: 18  CGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 13/26 (50%), Positives = 14/26 (53%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK F+C EC K F R   L  H K H
Sbjct: 10  EKPFKCVECGKGFSRRSALNVHHKLH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
           +     TGE+PF C    CGK F+R   L V
Sbjct: 2   SSGSSGTGEKPFKCVE--CGKGFSRRSALNV 30

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C+  + + S LR H   H GE+P   +
Sbjct: 18  CDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHSKTR 236
           EK FQC EC   F  S  L KH+++H +T 
Sbjct: 10  EKPFQCKECGMNFSWSCSLFKHLRSHERTD 39

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQ 184
           +     TGE+PF C  + CG  F+ S  L 
Sbjct: 2   SSGSSGTGEKPFQC--KECGMNFSWSCSLF 29

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 7/26 (26%), Positives = 9/26 (34%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVC 168
           C   +  +  L  HLR H    P   
Sbjct: 18  CGMNFSWSCSLFKHLRSHERTDPSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S LR H + HTGER    +
Sbjct: 18  CGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +  +SHL  H   H+GERP   +
Sbjct: 18  CGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K Y +  HL  H R HTGE+P   +
Sbjct: 18  CGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK F+C EC K + +  HL +H + H
Sbjct: 10  EKPFKCGECGKSYNQRVHLTQHQRVH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +G ++ L  H R HTGE+P   +
Sbjct: 18  CGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.8 bits (89), Expect = 1e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C KV+ + SHL  H   HTGE+P   +
Sbjct: 18  CGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK ++C EC K F R+ HL +H   H
Sbjct: 10  EKPYKCHECGKVFRRNSHLARHQLIH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +     L  H R HTGE+P   +
Sbjct: 18  CGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK F C +C K F     L +H + H
Sbjct: 10  EKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK + C  C  +F     L+ H++ H
Sbjct: 9   EKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 2/31 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
                  GE+P+ C  + CG RF     L+ 
Sbjct: 1   GSSGSSGGEKPYPC--EICGTRFRHLQTLKS 29

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + + S L AH R HTGE+P   +
Sbjct: 18  CGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVC 168
           C K +   S+L  H R HTGE     
Sbjct: 18  CGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.9 bits (84), Expect = 7e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
           +     TG +P+VC    CGK F     L +
Sbjct: 2   SSGSSGTGMKPYVCNE--CGKAFRSKSYLII 30

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +G  S    H R HTG+RP   +
Sbjct: 18  CGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C KV+ + S L  H + HTGE+P   +
Sbjct: 18  CGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K Y +   L  H R HTGE+    +
Sbjct: 18  CGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK ++C EC K + R   L  H + H
Sbjct: 10  EKPYKCVECGKGYKRRLDLDFHQRVH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
           +     +GE+P+ C    CGK + R  +L  
Sbjct: 2   SSGSSGSGEKPYKCVE--CGKGYKRRLDLDF 30

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +  +S L  H R HTGE+P   +
Sbjct: 18  CGKSFSISSQLATHQRIHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + +TS L  H R HTGE+P   +
Sbjct: 18  CGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K Y    +L  H + HTGERP   +
Sbjct: 18  CGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + K S L  H + HTGE+P   +
Sbjct: 18  CGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 156 HLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
                TGE+P+ C+   CGK FT+  +L V
Sbjct: 3   SGSSGTGEKPYECSI--CGKSFTKKSQLHV 30

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S+L  H+R H+GE+P   +
Sbjct: 18  CGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           EK + CSEC K F    +L  H++THS
Sbjct: 10  EKPYGCSECGKAFSSKSYLIIHMRTHS 36

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + +TS L  H R HTGE+P   +
Sbjct: 18  CGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S+L  H + H  E+P   +
Sbjct: 16  CEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K Y +  +L  H R H GE+    +
Sbjct: 18  CGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
           +     + E+P+ C  + CGK + R   L +
Sbjct: 2   SSGSSGSVEKPYKC--EDCGKGYNRRLNLDM 30

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 7e-04
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK ++C +C K + R  +L  H + H
Sbjct: 10  EKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + + ++L  H R HTGE+P   +
Sbjct: 18  CGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S L+ H R HTGE+P   +
Sbjct: 18  CGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + + S L  H + HTGE+P   +
Sbjct: 18  CGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
           +     TG + F CT   CGK FTR   L +
Sbjct: 2   SSGSSGTGGKHFECTE--CGKAFTRKSTLSM 30

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVC 168
           C K +   S+L  H R HTGE     
Sbjct: 18  CQKAFNTKSNLMVHQRTHTGESGPSS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +    +L  H R HTGE+    +
Sbjct: 18  CGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C KV+   S+L  H R HTGE+P   +
Sbjct: 18  CGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 7/27 (25%), Positives = 11/27 (40%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S L  H R H  ++    +
Sbjct: 18  CGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK  +C+EC K F     L  H +TH
Sbjct: 10  EKPCKCTECGKAFCWKSQLIMHQRTH 35

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.8 bits (87), Expect = 3e-04
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQ 184
           C     K S L+ H+R HT  RP+ C   +C   F     L 
Sbjct: 7   CGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLT 46

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +     L  H   HTGE+P   +
Sbjct: 18  CGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +     L  H R H+G++P   +
Sbjct: 18  CGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + + S L  H R H GE+P   +
Sbjct: 18  CGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S L  H   HT E+P   +
Sbjct: 18  CGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK F+C  C K F     L +H   H
Sbjct: 10  EKPFKCDICGKSFCGRSRLNRHSMVH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + +   L +H R H GE+P   +
Sbjct: 18  CGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           E  ++C EC K F R   L  H +TH
Sbjct: 10  ENPYECHECGKAFSRKYQLISHQRTH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S L  H R HTGE P   +
Sbjct: 18  CGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%)

Query: 156 HLRWHTGERPFVCTWQFCGKRFTRSDEL 183
                TGER + C+   CGK F R   L
Sbjct: 3   SGSSGTGERHYECSE--CGKAFARKSTL 28

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + + S L  H R HTGE+P   +
Sbjct: 18  CGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 7e-04
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           E+ ++CSEC K F R   L  H + H
Sbjct: 10  ERHYECSECGKAFARKSTLIMHQRIH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C KV+   ++L  H + HTGERP   +
Sbjct: 18  CGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
           +     TGE PF+C+   CGK FT    L +
Sbjct: 2   SSGSSGTGENPFICSE--CGKVFTHKTNLII 30

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S+L  H   HTGE+P   +
Sbjct: 18  CGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S+L  H R HTGE+P   +
Sbjct: 18  CQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S L  H R HTG +P   +
Sbjct: 18  CAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
           +     TG +P+ C+   C K F+   +L V
Sbjct: 2   SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIV 30

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S L  H R HTGE+P   +
Sbjct: 18  CGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           E  ++C EC K F R D L  H KTHS
Sbjct: 10  ENPYECCECGKVFSRKDQLVSHQKTHS 36

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + ++S L  H R HTGE+P   +
Sbjct: 18  CKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK +QCSEC K F  S  L +H  TH
Sbjct: 10  EKPYQCSECGKSFSGSYRLTQHWITH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +  +  L  H   HT E+P   +
Sbjct: 18  CGKSFSGSYRLTQHWITHTREKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S L  H   H+GE+P   +
Sbjct: 18  CGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K + +   L  H R H+GE+P   +
Sbjct: 18  CGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDEL 183
           +     TGE+ + C  + CGK F+R+  L
Sbjct: 2   SSGSSGTGEKLYNC--KECGKSFSRAPCL 28

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           EK + C EC K F R+  L KH + HS
Sbjct: 10  EKLYNCKECGKSFSRAPCLLKHERLHS 36

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
            K + C+EC K F R  HL +H K H+
Sbjct: 10  SKSYNCNECGKAFTRIFHLTRHQKIHT 36

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   + L  H R H+GE+P   +
Sbjct: 18  CRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
                  GE+P+ C    CGK F++   L V
Sbjct: 1   GSSGSSGGEKPYRCDQ--CGKAFSQKGSLIV 29

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S L  H   HTG++P   +
Sbjct: 18  CGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDEL 183
           +     TGE+P++C    CGK FT    L
Sbjct: 2   SSGSSGTGEKPYICAE--CGKAFTIRSNL 28

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S+L  H + HT ++P   +
Sbjct: 18  CGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVC 168
           C K + K S L  H R HTGE P   
Sbjct: 18  CGKSFIKKSQLHVHQRIHTGENPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C K +   S L  H R H+GE+P   +
Sbjct: 18  CGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           EK + C+EC + F  ++ L +H K H+
Sbjct: 8   EKPYSCAECKETFSDNNRLVQHQKMHT 34

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           E  ++CSEC K F R D L  H +TH+
Sbjct: 8   ENPYECSECGKAFNRKDQLISHQRTHA 34

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVC 168
           C K + +   L +H R H GE     
Sbjct: 16  CGKAFNRKDQLISHQRTHAGESGPSS 41

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
            K  QC EC + F    HL +H + H
Sbjct: 10  TKSHQCHECGRGFTLKSHLNQHQRIH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C + +   SHL  H R HTGE+P   +
Sbjct: 18  CGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVC 168
           C K +   S L  H   HTGE+P   
Sbjct: 18  CGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCT 169
           C+K +   S L  H R HTGE+P   +
Sbjct: 18  CHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 40.6 bits (94), Expect = 7e-04
 Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 1/54 (1%)

Query: 199 ILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSDNTVVTE 252
            LP T      +QC  C         L  H+ +H      +L  +      +TE
Sbjct: 170 GLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTL-TSSEIQRHITE 222

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 36.0 bits (82), Expect = 8e-04
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHSKTRCTS 239
           EK + C  C  +F R D +  H+++H  +   S
Sbjct: 8   EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKS 40

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 36.0 bits (83), Expect = 8e-04
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 207 EKRFQC--SECHKKFMRSDHLQKHIKTHSKTR 236
           +K F+C    C K F R  +++ HI+TH + R
Sbjct: 16  DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVC 168
           C K +   S+L  H + HTGE+P   
Sbjct: 18  CGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 9e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 155 AHLRWHTGERPFVCTWQFCGKRFTRSDEL 183
           +     TGERP++CT   CGK FT    L
Sbjct: 2   SSGSSGTGERPYICTV--CGKAFTDRSNL 28

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	339
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.94
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.84
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.83
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.82
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.79
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.79
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.77
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.75
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.74
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.74
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.71
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.67
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.66
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.65
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.64
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.63
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.62
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.62
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.6
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.6
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.6
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.58
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.57
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.57
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.56
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.55
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.55
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.53
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.52
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.51
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.5
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.48
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.47
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.46
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.45
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.44
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.43
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.43
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.42
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.41
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.41
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.41
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.4
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.4
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.4
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.4
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.39
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.38
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.38
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.37
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.34
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.34
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.33
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.32
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.3
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.29
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.28
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.27
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.25
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.23
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.2
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.16
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.15
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.14
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.14
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.14
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.14
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.13
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.03
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.03
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.02
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.02
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.01
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.0
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.0
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.98
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.97
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.96
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.95
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.95
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.94
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.91
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.9
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.89
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.89
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.89
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.89
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.88
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.88
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.88
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.87
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.86
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.84
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.84
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.84
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.82
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.81
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.8
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.78
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.78
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.76
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.74
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.74
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.72
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.69
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.68
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.66
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.64
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.6
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.57
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.55
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.55
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.55
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.54
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.53
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.5
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.48
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.48
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.46
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.45
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.44
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.41
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.39
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.37
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.36
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.35
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.34
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.34
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.31
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.31
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.31
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.31
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.3
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.28
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.59
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.26
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.57
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.24
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.22
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.22
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.19
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.47
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.15
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.14
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.04
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.04
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.01
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.0
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.0
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.96
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.94
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.91
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.89
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.87
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.86
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.86
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.85
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.85
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.05
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.0
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.79
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.77
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.73
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.66
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.65
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.76
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.57
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.06
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.82
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.47
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.53
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.18
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.36
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.95
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	84.67
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	82.07
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	81.7

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.95  E-value=5.9e-30  Score=216.56  Aligned_cols=168  Identities=27%  Similarity=0.465  Sum_probs=133.7

Q ss_pred             CCccceeCCCCCCCCccccccccccCCCCCCchhHHHHHHhhhhhcccccccccCccccccccccccccccccccccccC
Q psy13347         52 SRRVACTCPNCTEGGEREMFSYMLHGCLWGNTMEYALAARVLKLKIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRTAD  131 (339)
Q Consensus        52 ~~~~~~~C~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~  131 (339)
                      ....+|.|+.|++.+....                       .+..+.........+.|..|++.|.....|..|++.|.
T Consensus        17 ~~~~~~~C~~C~~~f~~~~-----------------------~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   73 (190)
T 2i13_A           17 PGEKPYACPECGKSFSRSD-----------------------HLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHT   73 (190)
T ss_dssp             --------------CCSSH-----------------------HHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCcCCCCccccCCHH-----------------------HHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcC
Confidence            4456799999996543321                       12333333445677999999999999999999999999


Q ss_pred             CCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcC
Q psy13347        132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQ  211 (339)
Q Consensus       132 ~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~  211 (339)
                      ++++|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++              .|.++++|.
T Consensus        74 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~~~  135 (190)
T 2i13_A           74 GEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACP--ECGKSFSQLAHLRAHQR--------------THTGEKPYK  135 (190)
T ss_dssp             CCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHHH--------------HHHCCCCEE
T ss_pred             CCCCccCcc--cCCccCCHHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHH--------------HhCCCCCeE
Confidence            999999977  999999999999999999999999999  99999999999999986              677889999


Q ss_pred             CCccccccCChhHHHHHHHhhcCCC---CCccccccCCccccccccccccCC
Q psy13347        212 CSECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNFSDNTVVTEDSKLELSG  260 (339)
Q Consensus       212 C~~C~k~F~~~~~L~~H~~~h~~~~---C~~C~~~f~~~~~l~~H~~~~~~~  260 (339)
                      |++|++.|.++..|..|+++|++++   |.+|++.|.++..|..|+++|++.
T Consensus       136 C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  187 (190)
T 2i13_A          136 CPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGK  187 (190)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC---
T ss_pred             CCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCC
Confidence            9999999999999999999999887   999999999999999999999743

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.94  E-value=1.5e-27  Score=201.81  Aligned_cols=142  Identities=18%  Similarity=0.333  Sum_probs=129.1

Q ss_pred             ccccCcccc--ccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHH-hhh-CCCCceec--CccccCC
Q psy13347        102 AEVNNKIRL--SSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHL-RWH-TGERPFVC--TWQFCGK  175 (339)
Q Consensus       102 ~~~~~~~~c--~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~-~~H-~~~k~~~C--~~~~C~~  175 (339)
                      ......+.|  ..|++.|.....|..|+++|.++++|.|.++.|++.|.+...|..|+ +.| .++++|.|  +  .|++
T Consensus        37 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~--~C~k  114 (190)
T 1tf6_A           37 HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFE--NCGK  114 (190)
T ss_dssp             HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSS--SSCE
T ss_pred             cCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCC--CCcc
Confidence            344667899  88999999999999999999999999997224999999999999999 677 46889999  7  9999


Q ss_pred             ccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc--cccccCChhHHHHHHHhhcCCCCCc---cccccCCcccc
Q psy13347        176 RFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHIKTHSKTRCTS---LVMNFSDNTVV  250 (339)
Q Consensus       176 ~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~C~~---C~~~f~~~~~l  250 (339)
                      .|.....|..|++              +|+++++|.|++  |++.|.+...|..|+++|++..|..   |++.|.+...|
T Consensus       115 ~f~~~~~L~~H~~--------------~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~~C~~~~~C~~~f~~~~~l  180 (190)
T 1tf6_A          115 AFKKHNQLKVHQF--------------SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY  180 (190)
T ss_dssp             ECSSHHHHHHHHG--------------GGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCSCCCCSTTTCCCCCSCHHHH
T ss_pred             ccCCHHHHHHHHH--------------HhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCCCcCCCCCcCCCccccHHHH
Confidence            9999999999986              677889999988  9999999999999999999977988   99999999999


Q ss_pred             ccccccccC
Q psy13347        251 TEDSKLELS  259 (339)
Q Consensus       251 ~~H~~~~~~  259 (339)
                      ..|+++|++
T Consensus       181 ~~H~~~h~~  189 (190)
T 1tf6_A          181 LKHVAECHQ  189 (190)
T ss_dssp             HHHHTTCC-
T ss_pred             HHHHHhhcC
Confidence            999999974

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.92  E-value=2.1e-26  Score=194.67  Aligned_cols=143  Identities=26%  Similarity=0.435  Sum_probs=117.5

Q ss_pred             ccccccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCC
Q psy13347        100 TTAEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTR  179 (339)
Q Consensus       100 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~  179 (339)
                      ........+.|..|++.|.....|..|++.|.++++|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|..
T Consensus        14 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~   89 (190)
T 2i13_A           14 ALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCP--ECGKSFSQ   89 (190)
T ss_dssp             -----------------CCSSHHHHHGGGCC---CCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESC
T ss_pred             hhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCC--cCchhCCHHHHHHHHHhcCCCCCccCc--ccCCccCC
Confidence            34455678999999999999999999999999999999977  999999999999999999999999999  99999999


Q ss_pred             hHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC---CCccccccCCcccccccccc
Q psy13347        180 SDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNFSDNTVVTEDSKL  256 (339)
Q Consensus       180 ~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~---C~~C~~~f~~~~~l~~H~~~  256 (339)
                      ...|..|++              .|.++++|.|++|++.|.+...|..|+++|++++   |..|++.|.++..|..|+++
T Consensus        90 ~~~l~~H~~--------------~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  155 (190)
T 2i13_A           90 RANLRAHQR--------------THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRT  155 (190)
T ss_dssp             HHHHHHHHH--------------HHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             HHHHHHHHH--------------hcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHh
Confidence            999999986              6678899999999999999999999999999887   99999999999999999999


Q ss_pred             ccCC
Q psy13347        257 ELSG  260 (339)
Q Consensus       257 ~~~~  260 (339)
                      |++.
T Consensus       156 H~~~  159 (190)
T 2i13_A          156 HTGE  159 (190)
T ss_dssp             HHCC
T ss_pred             cCCC
Confidence            9753

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=3.5e-25  Score=180.72  Aligned_cols=140  Identities=24%  Similarity=0.468  Sum_probs=126.7

Q ss_pred             Ccccccccccccccccccccccc---ccCCCCeEEeecccc---ccccCCchhHHHHHhhhCCCCceecCccccCCccCC
Q psy13347        106 NKIRLSSYFYPALISTLFSCSLR---TADRKKVHICHIEGC---NKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTR  179 (339)
Q Consensus       106 ~~~~c~~c~~~~~~~~~l~~h~~---~h~~~~~~~C~~~~C---~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~  179 (339)
                      ..+.|..|++.|.....|..|++   +|.++++|.|.+.+|   ++.|.....|..|++.|.++++|.|+++.|++.|..
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            36789999999999999999998   788999999976334   499999999999999999999999983349999999


Q ss_pred             hHHHHhhhcccCcccchhccccceecCCCCcCCCc--cccccCChhHHHHHH-HhhcCCC---CCc--cccccCCccccc
Q psy13347        180 SDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHI-KTHSKTR---CTS--LVMNFSDNTVVT  251 (339)
Q Consensus       180 ~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~-~~h~~~~---C~~--C~~~f~~~~~l~  251 (339)
                      ...|..|++              .|.++++|.|++  |++.|.+...|..|+ ++|++++   |..  |++.|.++..|.
T Consensus        82 ~~~l~~H~~--------------~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~  147 (155)
T 2gli_A           82 LENLKTHLR--------------SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR  147 (155)
T ss_dssp             HHHHHHHHH--------------HTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHH
T ss_pred             HHHHHHHHH--------------HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHH
Confidence            999999986              667789999998  999999999999999 7999877   988  999999999999


Q ss_pred             cccccccC
Q psy13347        252 EDSKLELS  259 (339)
Q Consensus       252 ~H~~~~~~  259 (339)
                      .|+++||+
T Consensus       148 ~H~~~hhg  155 (155)
T 2gli_A          148 KHVKTVHG  155 (155)
T ss_dssp             HHHHHSCC
T ss_pred             HHHHhhcC
Confidence            99999873

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.90  E-value=8e-25  Score=184.92  Aligned_cols=141  Identities=22%  Similarity=0.323  Sum_probs=128.2

Q ss_pred             ccCcccc--ccccccccccccccccccccCCCCeEEe--eccccccccCCchhHHHHHhhhCCCCceecCccccCCccCC
Q psy13347        104 VNNKIRL--SSYFYPALISTLFSCSLRTADRKKVHIC--HIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTR  179 (339)
Q Consensus       104 ~~~~~~c--~~c~~~~~~~~~l~~h~~~h~~~~~~~C--~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~  179 (339)
                      ....|.|  ..|++.|.....|..|++.|.++++|.|  .+  |++.|.....|..|+++|.++++|.|+++.|++.|..
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEG--CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTT--CCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESC
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCC--CChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCC
Confidence            3567888  6899999999999999999999999999  66  9999999999999999999999999974469999999


Q ss_pred             hHHHHhhhcccCcccchhcccccee-cCCCCcCC--CccccccCChhHHHHHHHhhcCCC---CCc--cccccCCccccc
Q psy13347        180 SDELQVNGGRFGIERTVVRILPMTW-CREKRFQC--SECHKKFMRSDHLQKHIKTHSKTR---CTS--LVMNFSDNTVVT  251 (339)
Q Consensus       180 ~~~L~~H~~~~~~~~~~~~~~~~~h-~~~k~~~C--~~C~k~F~~~~~L~~H~~~h~~~~---C~~--C~~~f~~~~~l~  251 (339)
                      ...|..|++.             .| .++++|.|  ++|++.|.+...|..|+++|++++   |..  |++.|.++..|.
T Consensus        87 ~~~l~~H~~~-------------~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~  153 (190)
T 1tf6_A           87 KANMKKHFNR-------------FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLK  153 (190)
T ss_dssp             HHHHHHHHHT-------------TSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHH
T ss_pred             HHHHHHHHHH-------------hcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHH
Confidence            9999999843             33 35689999  889999999999999999999887   988  999999999999


Q ss_pred             cccccccC
Q psy13347        252 EDSKLELS  259 (339)
Q Consensus       252 ~H~~~~~~  259 (339)
                      .|+++|++
T Consensus       154 ~H~~~H~~  161 (190)
T 1tf6_A          154 RHEKVHAG  161 (190)
T ss_dssp             HHHTSSCS
T ss_pred             HHHHHhCC
Confidence            99999874

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=1.6e-24  Score=172.28  Aligned_cols=107  Identities=22%  Similarity=0.387  Sum_probs=98.0

Q ss_pred             ccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccc
Q psy13347        123 FSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPM  202 (339)
Q Consensus       123 l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~  202 (339)
                      +..|.++|+|+++|+|.+  |++.|.....|..|+++|.++++|.|+  +|++.|.....|..|++              
T Consensus        10 ~~h~~~~h~Gek~y~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------   71 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIV--CKRSYVCLTSLRRHFNIHSWEKKYPCR--YCEKVFPLAEYRTKHEI--------------   71 (133)
T ss_dssp             SSEEEEEETTEEEEEETT--TCCEESCHHHHHHHHHHHHCCSCEECS--SSSCEESSHHHHHHHHH--------------
T ss_pred             HhhceeecCCCcCeECCC--CCCCcCCHHHHHHHHHHcCCCCCeeCC--ccCeecccccchhhhcc--------------
Confidence            455678899999999977  999999999999999999999999999  99999999999999985              


Q ss_pred             eecCCCCcCCCccccccCChhHHHHHHHhhcCCC---------CCccccccCCc
Q psy13347        203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR---------CTSLVMNFSDN  247 (339)
Q Consensus       203 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~---------C~~C~~~f~~~  247 (339)
                      +|++++||.|++|++.|.++..|..|+++|++++         |..|++.|...
T Consensus        72 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           72 HHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             ccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            7889999999999999999999999999998653         89999888654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=3.2e-24  Score=166.99  Aligned_cols=112  Identities=39%  Similarity=0.770  Sum_probs=74.8

Q ss_pred             CCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcC
Q psy13347        132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQ  211 (339)
Q Consensus       132 ~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~  211 (339)
                      ++++|.|.+++|++.|.....|..|++.|.++++|.|+++.|++.|.....|..|++              .|.++++|.
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~--------------~h~~~~~~~   68 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR--------------RHTGVKPFQ   68 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH--------------HHHCCCCEE
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHH--------------HcCCCCCcc
Confidence            456667754457777777777777777776666777753347777777777776664              455566677


Q ss_pred             CCccccccCChhHHHHHHHhhcCCC---C--CccccccCCccccccccccc
Q psy13347        212 CSECHKKFMRSDHLQKHIKTHSKTR---C--TSLVMNFSDNTVVTEDSKLE  257 (339)
Q Consensus       212 C~~C~k~F~~~~~L~~H~~~h~~~~---C--~~C~~~f~~~~~l~~H~~~~  257 (339)
                      |++|++.|.+...|..|+++|++++   |  +.|++.|.++..|..|+++|
T Consensus        69 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           69 CKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            7777777777777777777776655   6  66777777777777776654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=8.5e-24  Score=165.71  Aligned_cols=116  Identities=29%  Similarity=0.479  Sum_probs=103.5

Q ss_pred             CCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCc
Q psy13347        131 DRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRF  210 (339)
Q Consensus       131 ~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~  210 (339)
                      +++++|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++.++           .+.++++|
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~-----------~~~~~~~~   67 (124)
T 2dlq_A            3 SGSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFECP--KCGKCYFRKENLLEHEARNC-----------MNRSEQVF   67 (124)
T ss_dssp             CCCSSCCCTT--TCCCCSSHHHHHHHHHHHSSCCSCBCT--TTCCBCSSHHHHHHHHHHCC-----------CCSCCCCE
T ss_pred             CCCCCCCCCC--CCCcCCCHHHHHHHHHhCCCCCCeECC--CCCchhcCHHHHHHHHhhhh-----------cCCCCCCe
Confidence            4678899977  999999999999999999999999999  99999999999999986443           34578899


Q ss_pred             CCCccccccCChhHHHHHHHhhcCCC---CCccccccCCccccccccccccCCC
Q psy13347        211 QCSECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNFSDNTVVTEDSKLELSGG  261 (339)
Q Consensus       211 ~C~~C~k~F~~~~~L~~H~~~h~~~~---C~~C~~~f~~~~~l~~H~~~~~~~~  261 (339)
                      .|++|++.|.+...|..|+++|++++   |.+|++.|.++..|..|++..|.+.
T Consensus        68 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             ECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            99999999999999999999999887   9999999999999999998766554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=4.8e-24  Score=173.98  Aligned_cols=116  Identities=29%  Similarity=0.602  Sum_probs=103.8

Q ss_pred             ccCccccc-----cccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccc--cCCc
Q psy13347        104 VNNKIRLS-----SYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQF--CGKR  176 (339)
Q Consensus       104 ~~~~~~c~-----~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~--C~~~  176 (339)
                      ....+.|.     .|+..|.....|..|++.|.++++|.|.+++|++.|.....|..|++.|.++++|.|+  .  |++.
T Consensus        31 ~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~~~C~~~  108 (155)
T 2gli_A           31 ERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE--HEGCSKA  108 (155)
T ss_dssp             CSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECC--STTCCCE
T ss_pred             CCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCC--CCCCCCc
Confidence            34556665     4458899999999999999999999997556999999999999999999999999998  7  9999


Q ss_pred             cCChHHHHhhhcccCcccchhccccceecCCCCcCCCc--cccccCChhHHHHHHHhhcC
Q psy13347        177 FTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       177 f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~  234 (339)
                      |.....|..|++             +.|.++++|.|++  |++.|.++..|..|+++|+|
T Consensus       109 f~~~~~L~~H~~-------------~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          109 FSNASDRAKHQN-------------RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             ESSSSTTHHHHH-------------HTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             cCCHHHHHHHHH-------------HhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            999999999983             1677889999999  99999999999999999985

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=4.1e-22  Score=154.97  Aligned_cols=112  Identities=30%  Similarity=0.585  Sum_probs=104.7

Q ss_pred             cCcccccc--ccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHH
Q psy13347        105 NNKIRLSS--YFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDE  182 (339)
Q Consensus       105 ~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~  182 (339)
                      .+.|.|..  |++.|.....|..|++.|.++++|.|.++.|++.|.....|..|++.|.++++|.|+  +|++.|.....
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~   81 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK--TCQRKFSRSDH   81 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCC--ccCchhCCHHH
Confidence            45788987  999999999999999999999999997335999999999999999999999999999  99999999999


Q ss_pred             HHhhhcccCcccchhccccceecCCCCcCC--CccccccCChhHHHHHHHhh
Q psy13347        183 LQVNGGRFGIERTVVRILPMTWCREKRFQC--SECHKKFMRSDHLQKHIKTH  232 (339)
Q Consensus       183 L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C--~~C~k~F~~~~~L~~H~~~h  232 (339)
                      |..|++              +|.++++|.|  +.|++.|.++..|..|+++|
T Consensus        82 l~~H~~--------------~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTR--------------THTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHH--------------HHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHH--------------HhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999986              6778899999  89999999999999999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=1.1e-21  Score=153.76  Aligned_cols=110  Identities=31%  Similarity=0.582  Sum_probs=82.3

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      +++|.|.++.|++.|.+...|..|++.| ++++|.|+  .|++.|.....|..|++              .|.++++|.|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~~~C   65 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCA--ECGKAFVESSKLKRHQL--------------VHTGEKPFQC   65 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECT--TTCCEESSHHHHHHHGG--------------GTSCCCCEEC
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECC--CCCchhCCHHHHHHHHH--------------HcCCCCCeeC
Confidence            4677886324888888888888888877 67788887  88888888888888875              4556777888


Q ss_pred             Cc--cccccCChhHHHHHHHhhcCCC---CC--ccccccCCccccccccccccC
Q psy13347        213 SE--CHKKFMRSDHLQKHIKTHSKTR---CT--SLVMNFSDNTVVTEDSKLELS  259 (339)
Q Consensus       213 ~~--C~k~F~~~~~L~~H~~~h~~~~---C~--~C~~~f~~~~~l~~H~~~~~~  259 (339)
                      .+  |++.|.+...|..|+++|++++   |.  .|++.|.++..|..|+++|++
T Consensus        66 ~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             CSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             CCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            65  8888888888888888887765   74  488888888888888887754

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=8.2e-22  Score=154.56  Aligned_cols=114  Identities=32%  Similarity=0.584  Sum_probs=102.1

Q ss_pred             Cccccc--cccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHH
Q psy13347        106 NKIRLS--SYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDEL  183 (339)
Q Consensus       106 ~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L  183 (339)
                      +.|.|.  .|+..|.....|..|+++| ++++|.|.+  |++.|.....|..|+++|.++++|.|+++.|++.|.....|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            457888  8999999999999999999 889999977  99999999999999999999999999733499999999999


Q ss_pred             HhhhcccCcccchhccccceecCCCCcCCC--ccccccCChhHHHHHHHhhcCCC
Q psy13347        184 QVNGGRFGIERTVVRILPMTWCREKRFQCS--ECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       184 ~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ..|++              +|.++++|.|+  .|++.|.+...|..|+++|++++
T Consensus        81 ~~H~~--------------~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           81 RTHVR--------------IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             HHHHH--------------HHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             HHHHH--------------HhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            99986              67788999996  59999999999999999999764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=9.5e-22  Score=153.95  Aligned_cols=114  Identities=25%  Similarity=0.436  Sum_probs=105.0

Q ss_pred             ccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhh---hCCCCceecCccccCCccCCh
Q psy13347        104 VNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRW---HTGERPFVCTWQFCGKRFTRS  180 (339)
Q Consensus       104 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~---H~~~k~~~C~~~~C~~~f~~~  180 (339)
                      ....|.|..|++.|.....|..|++.|.++++|.|.+  |++.|.+...|..|++.   |.++++|.|+  +|++.|...
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~   79 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCS--VCQETFRRR   79 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECS--SSCCEESSH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECC--CCCCccCCH
Confidence            3567899999999999999999999999999999977  99999999999999985   5788999999  999999999


Q ss_pred             HHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHH-hhcCC
Q psy13347        181 DELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIK-THSKT  235 (339)
Q Consensus       181 ~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~h~~~  235 (339)
                      ..|..|++              .|.++++|.|++|++.|.++..|..|++ .|.++
T Consensus        80 ~~l~~H~~--------------~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           80 MELRLHMV--------------SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHH--------------HHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHHH--------------HcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            99999986              6778899999999999999999999998 56554

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.83  E-value=7.8e-22  Score=156.70  Aligned_cols=114  Identities=18%  Similarity=0.225  Sum_probs=101.0

Q ss_pred             ccccccccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCcc
Q psy13347         98 YKTTAEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRF  177 (339)
Q Consensus        98 ~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f  177 (339)
                      +....+....|.|..|++.|.....|..|+++|+++++|.|.+  |++.|.+...|..|+++|++++||.|+  +|++.|
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F   88 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCL--ACGKSF   88 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEES--SSCCEE
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccCC--CCCCCc
Confidence            3445567788999999999999999999999999999999977  999999999999999999999999999  999999


Q ss_pred             CChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChh
Q psy13347        178 TRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSD  223 (339)
Q Consensus       178 ~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~  223 (339)
                      .....|..|+++|+...        .....++|+|.+|++.|.+..
T Consensus        89 ~~~~~L~~H~~~hh~~~--------p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A           89 INYQFMSSHIKSVHSQD--------PSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             SSHHHHHHHHHHHTCCC--------TTSSSCCEEECCCCSSCCCCC
T ss_pred             CCHHHHHHHhHHhcCCC--------CCCCCCCeecCCCCchhhhcc
Confidence            99999999998766543        223457899999999997654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.82  E-value=3.8e-21  Score=156.82  Aligned_cols=108  Identities=23%  Similarity=0.385  Sum_probs=52.7

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhh-hCCCCc--------eecCccccCCccCChHHHHhhhcccCcccchhccccce
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRW-HTGERP--------FVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMT  203 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~-H~~~k~--------~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~  203 (339)
                      ...|.|.+  |++.|.+...|..|++. |.++++        |.|+  .|++.|.....|..|++              .
T Consensus        23 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~   84 (155)
T 2rpc_A           23 QLSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP--REGKSFKAKYKLVNHIR--------------V   84 (155)
T ss_dssp             CCSSSCCC--CCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCT--TSSCCCSSHHHHHHHTH--------------H
T ss_pred             hccccccc--CCcccCCHHHHHHHHHhhcCCCcccCCccccccCCC--CcccccCCHHHHHHHHH--------------h
Confidence            34445533  55555555555555543 433332        4454  55555555555555543              3


Q ss_pred             ecCCCCcCCCc--cccccCChhHHHHHHHhhcCCC---CCc--cccccCCcccccccccccc
Q psy13347        204 WCREKRFQCSE--CHKKFMRSDHLQKHIKTHSKTR---CTS--LVMNFSDNTVVTEDSKLEL  258 (339)
Q Consensus       204 h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~---C~~--C~~~f~~~~~l~~H~~~~~  258 (339)
                      |.++++|.|.+  |++.|.+...|..|+++|++++   |.+  |++.|.++..|..|+++|+
T Consensus        85 h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~  146 (155)
T 2rpc_A           85 HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT  146 (155)
T ss_dssp             HHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTT
T ss_pred             cCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhc
Confidence            33444555544  5555555555555555554443   543  5555555555555555444

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.81  E-value=1.6e-20  Score=153.08  Aligned_cols=119  Identities=27%  Similarity=0.436  Sum_probs=107.2

Q ss_pred             ccccCccccccccccccccccccccccc-cCCCCe--------EEeeccccccccCCchhHHHHHhhhCCCCceecCccc
Q psy13347        102 AEVNNKIRLSSYFYPALISTLFSCSLRT-ADRKKV--------HICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQF  172 (339)
Q Consensus       102 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~-h~~~~~--------~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~  172 (339)
                      ......+.|..|++.|.....|..|++. |.+..+        |.|.+  |++.|.....|..|+++|.++++|.|.++.
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~   97 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFPG   97 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECSCTT
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccCCcCC
Confidence            4456789999999999999999999998 776654        89977  999999999999999999999999998222


Q ss_pred             cCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc--cccccCChhHHHHHHHhhcCCC
Q psy13347        173 CGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       173 C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      |++.|.....|..|++              +|.++++|.|.+  |++.|.++..|..|+++|++++
T Consensus        98 C~~~f~~~~~L~~H~~--------------~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k  149 (155)
T 2rpc_A           98 CGKIFARSENLKIHKR--------------THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK  149 (155)
T ss_dssp             TCCEESCHHHHHHHHT--------------TTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCC
T ss_pred             CCCccCCHHHHHHHHH--------------hhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            9999999999999986              667889999997  9999999999999999999876

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.79  E-value=6.1e-20  Score=135.31  Aligned_cols=89  Identities=36%  Similarity=0.767  Sum_probs=80.0

Q ss_pred             CCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcC
Q psy13347        132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQ  211 (339)
Q Consensus       132 ~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~  211 (339)
                      ++++|.|.++.|++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++              .|.++++|.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~~~   64 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIR--------------THTGEKPFA   64 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHH--------------HHHCCCCEE
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCC--CCCcccCCHHHHHHHHH--------------HcCCCCCcc
Confidence            36789997446999999999999999999999999999  99999999999999986              677889999


Q ss_pred             CCccccccCChhHHHHHHHhhcCCC
Q psy13347        212 CSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       212 C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      |++|++.|.+...|..|+++|++++
T Consensus        65 C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           65 CDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCCCCchhCCHHHHHHHHHHhcccC
Confidence            9999999999999999999999863

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=7e-20  Score=141.59  Aligned_cols=99  Identities=17%  Similarity=0.194  Sum_probs=88.8

Q ss_pred             cccccccccccCCCCeEEeeccccccccCCchhHHHHHhh--hCCCCcee-cCccccCCcc--CChHHHHhhhcccCccc
Q psy13347        120 STLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRW--HTGERPFV-CTWQFCGKRF--TRSDELQVNGGRFGIER  194 (339)
Q Consensus       120 ~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~--H~~~k~~~-C~~~~C~~~f--~~~~~L~~H~~~~~~~~  194 (339)
                      ...|..|+++|+++++|.|.+  |++.|.....|..|++.  |.+.+++. |+  .|++.|  .....|..|++      
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~--~C~~~f~f~~~~~l~~H~~------   73 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDN--NNPKRWSKPRKRSLLEMEG------   73 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCC--CCCSCCSSCCCCCCCCCCC------
T ss_pred             chhhhhheeeeCCCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCC--CCCcccccccHHHHHHHhh------
Confidence            457899999999999999977  99999999999999998  77777655 98  999999  88888888875      


Q ss_pred             chhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        195 TVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       195 ~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                              +|.++++|.|++|++.|.++..|..|+++|+...
T Consensus        74 --------~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           74 --------KEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             --------SCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             --------ccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence                    7778999999999999999999999999987654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=1.8e-19  Score=134.55  Aligned_cols=91  Identities=25%  Similarity=0.568  Sum_probs=83.3

Q ss_pred             cCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCC
Q psy13347        130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKR  209 (339)
Q Consensus       130 h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~  209 (339)
                      +.++++|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++              .|.++++
T Consensus         3 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~   64 (96)
T 2dmd_A            3 SGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCK--TCDYAAADSSSLNKHLR--------------IHSDERP   64 (96)
T ss_dssp             CCCCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECS--SSCCEESSHHHHHHHHH--------------HSCCCCC
T ss_pred             CCCCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCC--CCCCccCCHHHHHHHHH--------------HhCCCCC
Confidence            45688999977  999999999999999999999999999  99999999999999986              6667899


Q ss_pred             cCCCccccccCChhHHHHHHHhhcCCCCC
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKTHSKTRCT  238 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~h~~~~C~  238 (339)
                      |.|.+|++.|.+...|..|+++|++++-+
T Consensus        65 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           65 FKCQICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             EECSSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             ccCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999987633

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.77  E-value=4.4e-19  Score=133.37  Aligned_cols=90  Identities=50%  Similarity=0.979  Sum_probs=82.3

Q ss_pred             CCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCc
Q psy13347        131 DRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRF  210 (339)
Q Consensus       131 ~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~  210 (339)
                      ...++|.|.+++|++.|.....|..|++.|.++++|.|+++.|++.|.....|..|++              .|.++++|
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~--------------~h~~~~~~   76 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR--------------KHTGAKPF   76 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHH--------------HHTSCCSC
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHH--------------HhCCCCCe
Confidence            3467899987789999999999999999999999999974479999999999999986              67788999


Q ss_pred             CCCccccccCChhHHHHHHHhhcC
Q psy13347        211 QCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       211 ~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      .|++|++.|.+...|..|+++|++
T Consensus        77 ~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           77 QCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             ECCCCcCccCCHHHHHHHHHHhCC
Confidence            999999999999999999999975

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.76  E-value=9.5e-19  Score=133.07  Aligned_cols=89  Identities=38%  Similarity=0.693  Sum_probs=82.9

Q ss_pred             cCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCC
Q psy13347        130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKR  209 (339)
Q Consensus       130 h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~  209 (339)
                      ...+++|.|.+  |++.|.....|..|++.|.++++|.|+  +|++.|.....|..|++              .|.++++
T Consensus        12 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~   73 (106)
T 2ee8_A           12 SKTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCD--ICHKAFRRQDHLRDHRY--------------IHSKEKP   73 (106)
T ss_dssp             CCCCCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBCS--SSCCBCSCHHHHHHHGG--------------GSCCCCT
T ss_pred             cCCCcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCC--CccchhCCHHHHHHHHH--------------HhCCCCC
Confidence            45578999977  999999999999999999999999999  99999999999999986              6677899


Q ss_pred             cCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      |.|.+|++.|.+...|..|+++|++++
T Consensus        74 ~~C~~C~~~f~~~~~L~~H~~~H~~~~  100 (106)
T 2ee8_A           74 FKCQECGKGFCQSRTLAVHKTLHMQTS  100 (106)
T ss_dssp             TSCSSSCCCCSSHHHHHHHHHHTTSCC
T ss_pred             eECCCcCCcccCHHHHHHHHHHhCCCC
Confidence            999999999999999999999999865

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.75  E-value=5.5e-19  Score=127.72  Aligned_cols=82  Identities=33%  Similarity=0.708  Sum_probs=76.9

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++              .|.++++|.|++
T Consensus         1 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~~~C~~   62 (82)
T 2kmk_A            1 SFDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQ--YCGKRFHQKSDMKKHTF--------------IHTGEKPHKCQV   62 (82)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHHTCCCEECS--SSCCEESSHHHHHHHHH--------------HHHTCCCEECTT
T ss_pred             CccCCC--CcccccCchhHHHHHHHcCCCCCeeCC--cCChhhCCHHHHHHHHH--------------HhcCCCCCcCCC
Confidence            589977  999999999999999999999999999  99999999999999986              677889999999


Q ss_pred             cccccCChhHHHHHHHhhcC
Q psy13347        215 CHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       215 C~k~F~~~~~L~~H~~~h~~  234 (339)
                      |++.|.+...|..|+++|+|
T Consensus        63 C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           63 CGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             TSCEESSHHHHHHHHHHHC-
T ss_pred             cchhhCChHHHHHHHHhhCC
Confidence            99999999999999999975

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.74  E-value=1.3e-18  Score=127.90  Aligned_cols=87  Identities=48%  Similarity=0.942  Sum_probs=79.3

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      .+.|.|.+++|++.|.....|..|++.|.++++|.|+++.|++.|.....|..|++              .|.++++|.|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~--------------~h~~~~~~~C   68 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR--------------KHTGHRPFQC   68 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHH--------------HHHCCCCEEC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHH--------------HcCCCCCccC
Confidence            56799977779999999999999999999999999974469999999999999985              6778899999


Q ss_pred             CccccccCChhHHHHHHHhhc
Q psy13347        213 SECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       213 ~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      ++|++.|.+...|..|+++|.
T Consensus        69 ~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           69 QKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             SSSSCEESSHHHHHHHGGGGC
T ss_pred             CCCCcccCCHHHHHHHHHhhC
Confidence            999999999999999999884

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=2.9e-18  Score=127.60  Aligned_cols=87  Identities=37%  Similarity=0.730  Sum_probs=79.0

Q ss_pred             CCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCC--C
Q psy13347        131 DRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCRE--K  208 (339)
Q Consensus       131 ~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~--k  208 (339)
                      +++++|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++              .|.++  +
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~~   64 (95)
T 2yt9_A            3 SGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCP--VCGLRFKRKDRMSYHVR--------------SHDGSVGK   64 (95)
T ss_dssp             CCCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECS--SSCCEESCHHHHHHHHH--------------HHCCCCCS
T ss_pred             CCCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHH--------------HhcCCCCC
Confidence            4688999977  999999999999999999999999999  99999999999999996              44454  8


Q ss_pred             CcCCCccccccCChhHHHHHHH-hhcCC
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIK-THSKT  235 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~-~h~~~  235 (339)
                      +|.|++|++.|.+...|..|++ +|.+.
T Consensus        65 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           65 PYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             ceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            9999999999999999999986 77764

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.7e-18  Score=132.68  Aligned_cols=88  Identities=28%  Similarity=0.604  Sum_probs=82.5

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCC
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCRE  207 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~  207 (339)
                      ..|+++++|.| .  |++.|.....|..|++.|.++++|.|+  +|++.|.....|..|++              +|.++
T Consensus         3 ~~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~   63 (110)
T 2csh_A            3 SGSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMK--------------IHTGI   63 (110)
T ss_dssp             CCCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECT--TTSCEESSSHHHHHHHT--------------TTCCC
T ss_pred             CCCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCC--CCCcccCCHHHHHHHHH--------------HcCCC
Confidence            45888999999 8  999999999999999999999999999  99999999999999986              56678


Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      ++|.|++|++.|.+...|..|+++|+.
T Consensus        64 ~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           64 KPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             CCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            999999999999999999999999875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=9.2e-19  Score=133.55  Aligned_cols=91  Identities=24%  Similarity=0.483  Sum_probs=82.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhcccccee
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTW  204 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h  204 (339)
                      .+++.|+++++|.|.+  |++.|.....|..|+++|  .++|.|.  +|++.|.....|..|+               .|
T Consensus         6 s~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H--~~~~~C~--~C~~~f~~~~~l~~H~---------------~H   64 (107)
T 1wjp_A            6 SGASPVENKEVYQCRL--CNAKLSSLLEQGSHERLC--RNAAVCP--YCSLRFFSPELKQEHE---------------SK   64 (107)
T ss_dssp             CCCCCCCCCCCCBCTT--TCCBCSSHHHHHHHHHHH--HHSBCCT--TTCCCBSSHHHHHHHH---------------HH
T ss_pred             ccCcccCCCcCeECCC--CCCccCCHHHHHHHHHHC--CCCccCC--CCCCccCCHHHHHHHH---------------Hc
Confidence            4568899999999977  999999999999999999  4789999  9999999999999997               46


Q ss_pred             cCCCCcCCCccccccCChhHHHHHHH-hhcCCC
Q psy13347        205 CREKRFQCSECHKKFMRSDHLQKHIK-THSKTR  236 (339)
Q Consensus       205 ~~~k~~~C~~C~k~F~~~~~L~~H~~-~h~~~~  236 (339)
                      .++++|.|++|++.|.+...|..|++ +|.+++
T Consensus        65 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   97 (107)
T 1wjp_A           65 CEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNN   97 (107)
T ss_dssp             CSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCC
T ss_pred             CCCCCccCccccchhCCHHHHHHHHHHHcCCCC
Confidence            67899999999999999999999997 887765

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=4.4e-19  Score=137.07  Aligned_cols=99  Identities=15%  Similarity=0.126  Sum_probs=86.6

Q ss_pred             CchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCc-CCCcccccc--CChhHH
Q psy13347        149 KTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRF-QCSECHKKF--MRSDHL  225 (339)
Q Consensus       149 ~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~-~C~~C~k~F--~~~~~L  225 (339)
                      ....|..|+++|.++++|.|+  .|++.|.....|..|++.+            .|.+.+++ .|.+|++.|  .+...|
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~~------------~h~~~~~~~~C~~C~~~f~f~~~~~l   68 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCK--DCSAAYDTLVELTVHMNET------------GHYRDDNHETDNNNPKRWSKPRKRSL   68 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBS--SSSCEESSHHHHHHHHHHT------------CCCBCSCCCCCCCCCSCCSSCCCCCC
T ss_pred             cchhhhhheeeeCCCCCEECC--ccCchhcCHHHHHHHHHHh------------CccccCCCccCCCCCcccccccHHHH
Confidence            345788999999999999999  9999999999999999641            14455555 599999999  999999


Q ss_pred             HHHHHhhcCCC---CCccccccCCccccccccccccCCC
Q psy13347        226 QKHIKTHSKTR---CTSLVMNFSDNTVVTEDSKLELSGG  261 (339)
Q Consensus       226 ~~H~~~h~~~~---C~~C~~~f~~~~~l~~H~~~~~~~~  261 (339)
                      ..|+++|++++   |.+|++.|.++..|..|++.|+...
T Consensus        69 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           69 LEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             HHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            99999999887   9999999999999999999988654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.2e-17  Score=124.53  Aligned_cols=86  Identities=24%  Similarity=0.465  Sum_probs=79.5

Q ss_pred             hCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC---
Q psy13347        160 HTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR---  236 (339)
Q Consensus       160 H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~---  236 (339)
                      +.++++|.|.  +|++.|.....|..|++              .|.++++|.|++|++.|.+...|..|+++|++++   
T Consensus         3 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   66 (96)
T 2dmd_A            3 SGSSGPHKCE--VCGKCFSRKDKLKTHMR--------------CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK   66 (96)
T ss_dssp             CCCCCCCCBT--TTTBCCCCHHHHHHHGG--------------GCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEE
T ss_pred             CCCCcCeECC--CCCCccCCHHHHHHHHH--------------hcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCcc
Confidence            4678999999  99999999999999986              5667899999999999999999999999999887   


Q ss_pred             CCccccccCCccccccccccccCCC
Q psy13347        237 CTSLVMNFSDNTVVTEDSKLELSGG  261 (339)
Q Consensus       237 C~~C~~~f~~~~~l~~H~~~~~~~~  261 (339)
                      |.+|++.|.+...|..|+++|+++.
T Consensus        67 C~~C~~~f~~~~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           67 CQICPYASRNSSQLTVHLRSHTGDS   91 (96)
T ss_dssp             CSSSSCEESSHHHHHHHHTTCCSCC
T ss_pred             CCCCCCccCCHHHHHHHHHHhcCCC
Confidence            9999999999999999999998654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=8e-18  Score=123.85  Aligned_cols=85  Identities=33%  Similarity=0.627  Sum_probs=76.2

Q ss_pred             CCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC---CC
Q psy13347        162 GERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR---CT  238 (339)
Q Consensus       162 ~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~---C~  238 (339)
                      ++++|.|+++.|++.|.....|..|++              .|.++++|.|.+|++.|.+...|..|+++|++.+   |.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~--------------~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   66 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIR--------------IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD   66 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHH--------------HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHH--------------HhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCC
Confidence            468999984469999999999999986              6777899999999999999999999999999887   99


Q ss_pred             ccccccCCccccccccccccCC
Q psy13347        239 SLVMNFSDNTVVTEDSKLELSG  260 (339)
Q Consensus       239 ~C~~~f~~~~~l~~H~~~~~~~  260 (339)
                      .|++.|.+...|..|+++|++.
T Consensus        67 ~C~~~f~~~~~l~~H~~~H~~~   88 (90)
T 1a1h_A           67 ICGRKFARSDERKRHTKIHLRQ   88 (90)
T ss_dssp             TTCCEESSHHHHHHHHGGGGC-
T ss_pred             CCCchhCCHHHHHHHHHHhccc
Confidence            9999999999999999999743

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.67  E-value=2.1e-17  Score=111.81  Aligned_cols=58  Identities=31%  Similarity=0.683  Sum_probs=54.0

Q ss_pred             CCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        163 ERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       163 ~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ||||.|.  +|++.|.....|..|++              +|++++||.|++||+.|.++..|..|+++|+|+.
T Consensus         2 EKpy~C~--~C~k~F~~~~~L~~H~~--------------~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCN--FCGKTYRDASGLSRHRR--------------AHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHH--------------HHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCC--CCCCEeCCHHHHHHHHH--------------HhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7999999  99999999999999986              8889999999999999999999999999999863

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=5.1e-17  Score=120.82  Aligned_cols=84  Identities=27%  Similarity=0.522  Sum_probs=76.0

Q ss_pred             CCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCC--C--
Q psy13347        161 TGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKT--R--  236 (339)
Q Consensus       161 ~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~--~--  236 (339)
                      .++++|.|.  +|++.|.....|..|++              .|.++++|.|++|++.|.+...|..|+++|++.  +  
T Consensus         3 ~~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   66 (95)
T 2yt9_A            3 SGSSGVACE--ICGKIFRDVYHLNRHKL--------------SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY   66 (95)
T ss_dssp             CCCSCEECS--SSCCEESSSHHHHHHHH--------------HSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSB
T ss_pred             CCCCCeECC--CCCCccCChHHHHHHHH--------------hcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCce
Confidence            578899999  99999999999999986              666789999999999999999999999999986  3  


Q ss_pred             -CCccccccCCccccccccccccCC
Q psy13347        237 -CTSLVMNFSDNTVVTEDSKLELSG  260 (339)
Q Consensus       237 -C~~C~~~f~~~~~l~~H~~~~~~~  260 (339)
                       |.+|++.|.++..|..|++..|.+
T Consensus        67 ~C~~C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           67 ICQSCGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             CCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred             ECCCccchhCCHHHHHHHHHHhcCC
Confidence             999999999999999999754433

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1e-16  Score=114.96  Aligned_cols=74  Identities=19%  Similarity=0.419  Sum_probs=68.6

Q ss_pred             CCCCeEEeeccccccccCCchhHHHHHh-hhCCCCceecCccc--cCCccCChHHHHhhhcccCcccchhccccceecCC
Q psy13347        131 DRKKVHICHIEGCNKVYGKTSHLRAHLR-WHTGERPFVCTWQF--CGKRFTRSDELQVNGGRFGIERTVVRILPMTWCRE  207 (339)
Q Consensus       131 ~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~~~--C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~  207 (339)
                      +++++|.|.++.|++.|.+...|..|++ .|.++++|.|+  .  |++.|.....|..|++              +|+++
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~--~~~C~k~f~~~~~L~~H~~--------------~H~~~   66 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCP--EPACGKSFNFKKHLKEHMK--------------LHSDT   66 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECS--CTTTCCEESSHHHHHHHHH--------------HHHTS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECC--CCCCcCccCCHHHHHHHHH--------------HhCCC
Confidence            5678999987789999999999999999 79999999998  7  9999999999999986              77889


Q ss_pred             CCcCCCccccccC
Q psy13347        208 KRFQCSECHKKFM  220 (339)
Q Consensus       208 k~~~C~~C~k~F~  220 (339)
                      ++|.|++|++.|.
T Consensus        67 ~~~~C~~C~k~F~   79 (79)
T 2dlk_A           67 RDYICEFSGPSSG   79 (79)
T ss_dssp             CCCSCCSSSCCCC
T ss_pred             CCeeCCCCCCCCC
Confidence            9999999999985

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.64  E-value=1e-16  Score=121.73  Aligned_cols=92  Identities=25%  Similarity=0.367  Sum_probs=84.8

Q ss_pred             cccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHH
Q psy13347        103 EVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDE  182 (339)
Q Consensus       103 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~  182 (339)
                      .....+.|..|++.|.....|..|++.|.++++|.|.+  |++.|.....|..|++.|.++++|.|.  +|++.|.....
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~   88 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQ--ECGKGFCQSRT   88 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSCS--SSCCCCSSHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeECC--CcCCcccCHHH
Confidence            34567999999999999999999999999999999977  999999999999999999999999999  99999999999


Q ss_pred             HHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        183 LQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       183 L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      |..|++              +|.++++|.+
T Consensus        89 L~~H~~--------------~H~~~~~~~~  104 (106)
T 2ee8_A           89 LAVHKT--------------LHMQTSSPTA  104 (106)
T ss_dssp             HHHHHH--------------HTTSCCCCCC
T ss_pred             HHHHHH--------------HhCCCCCCcC
Confidence            999996              6667777764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=9.4e-17  Score=122.29  Aligned_cols=85  Identities=12%  Similarity=0.230  Sum_probs=76.5

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      .+++.|.++++|.|.  +|++.|.....|..|++.              |  .++|.|.+|++.|.+...|..|++ |++
T Consensus         6 s~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~--------------H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~   66 (107)
T 1wjp_A            6 SGASPVENKEVYQCR--LCNAKLSSLLEQGSHERL--------------C--RNAAVCPYCSLRFFSPELKQEHES-KCE   66 (107)
T ss_dssp             CCCCCCCCCCCCBCT--TTCCBCSSHHHHHHHHHH--------------H--HHSBCCTTTCCCBSSHHHHHHHHH-HCS
T ss_pred             ccCcccCCCcCeECC--CCCCccCCHHHHHHHHHH--------------C--CCCccCCCCCCccCCHHHHHHHHH-cCC
Confidence            356789999999999  999999999999999863              3  368999999999999999999996 988


Q ss_pred             CC---CCccccccCCcccccccccccc
Q psy13347        235 TR---CTSLVMNFSDNTVVTEDSKLEL  258 (339)
Q Consensus       235 ~~---C~~C~~~f~~~~~l~~H~~~~~  258 (339)
                      ++   |.+|++.|.++..|..|++..|
T Consensus        67 ~~~~~C~~C~~~f~~~~~L~~H~~~~H   93 (107)
T 1wjp_A           67 YKKLTCLECMRTFKSSFSIWRHQVEVH   93 (107)
T ss_dssp             TGGGEEGGGTEECSSHHHHHHHHHHTS
T ss_pred             CCCccCccccchhCCHHHHHHHHHHHc
Confidence            77   9999999999999999998444

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.62  E-value=2.4e-17  Score=120.96  Aligned_cols=82  Identities=29%  Similarity=0.600  Sum_probs=73.6

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      +++|.|.+  |++.|.....|..|+++|.++++|.|+  .|++.|.....|..|++.|+               .++|.|
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~---------------~~~~~c   61 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDERKRHRDIQH---------------ILPILE   61 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECT--TTCCEESSHHHHHHHHHHHT---------------HHHHHH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCC--CCCCccCCHHHHHHHHHHhC---------------CCcchH
Confidence            47899977  999999999999999999999999999  99999999999999987433               267999


Q ss_pred             CccccccCChhHHHHHHHhhc
Q psy13347        213 SECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       213 ~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      +.|++.|.+...|..|++.++
T Consensus        62 ~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           62 DKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhHHHHHHHH
Confidence            999999999999999998765

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.62  E-value=2.5e-16  Score=114.29  Aligned_cols=80  Identities=26%  Similarity=0.553  Sum_probs=70.3

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhCCCCceecCccc--cCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQF--CGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~--C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      +|.|.++.|++.|.....|..|+++|.++++|.|+  .  |++.|.....|..|++              +|++   |.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~~~C~~~f~~~~~l~~H~~--------------~h~~---~~C   61 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP--HEGCDKRFSLPSRLKRHEK--------------VHAG---YPC   61 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECC--STTCCCEESSHHHHHHHHH--------------HHHS---EEC
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCC--CCCCcCccCCHHHHHHHHH--------------HhCC---CCC
Confidence            58893333999999999999999999999999998  7  9999999999999986              5555   899


Q ss_pred             Cc---cccccCChhHHHHHHHhhc
Q psy13347        213 SE---CHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       213 ~~---C~k~F~~~~~L~~H~~~h~  233 (339)
                      ..   |++.|.+...|..|+++|+
T Consensus        62 ~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           62 KKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCCCCCccCCHHHHHHHHHhcC
Confidence            99   9999999999999999875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.60  E-value=4.7e-16  Score=105.08  Aligned_cols=55  Identities=33%  Similarity=0.582  Sum_probs=51.8

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG  191 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~  191 (339)
                      ||||+|.+  |++.|...+.|..|+++|++++||.|+  +|++.|...+.|..|+++|.
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~--~C~k~F~~~~~L~~H~~~Ht   56 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCP--ECGKCFRDQSEVNRHLKVHQ   56 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHGGGGS
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHHHhCCCcCeECC--CCCCCcCCHHHHHHHhCccC
Confidence            79999977  999999999999999999999999999  99999999999999997443

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=9.8e-16  Score=111.49  Aligned_cols=80  Identities=23%  Similarity=0.382  Sum_probs=72.9

Q ss_pred             cccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCC----CceecCccccCCccCChHHHHhhhcccCcccchh
Q psy13347        122 LFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGE----RPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVV  197 (339)
Q Consensus       122 ~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~----k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~  197 (339)
                      .+..|+++|+++++|.|.+  |++.|.....|..|++.|+..    ++|.|.  .|++.|.....|..|++         
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~---------   68 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS--KCGKTFTRRNTMARHAD---------   68 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECS--SSCCEESCHHHHHHHHH---------
T ss_pred             CcccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECC--CCCChhCCHHHHHHHHH---------
Confidence            3678999999999999977  999999999999999977665    789999  99999999999999996         


Q ss_pred             ccccceecCCCCcCCCcccccc
Q psy13347        198 RILPMTWCREKRFQCSECHKKF  219 (339)
Q Consensus       198 ~~~~~~h~~~k~~~C~~C~k~F  219 (339)
                           +|.++++|.|..|+..|
T Consensus        69 -----~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           69 -----NCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             -----HCCCCCSCCCCCCCCCC
T ss_pred             -----HccCCCCcccCCCCCCC
Confidence                 67788999999999876

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.60  E-value=2.5e-16  Score=113.56  Aligned_cols=79  Identities=25%  Similarity=0.432  Sum_probs=75.7

Q ss_pred             cccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhh
Q psy13347        108 IRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNG  187 (339)
Q Consensus       108 ~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~  187 (339)
                      +.|..|++.|.....|..|++.|.++++|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|+
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQ--VCGKAFSQSSNLITHS   77 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCCCEECT--TTSCEESSHHHHHHHH
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCCCCcCC--CcchhhCChHHHHHHH
Confidence            679999999999999999999999999999977  999999999999999999999999999  9999999999999999


Q ss_pred             ccc
Q psy13347        188 GRF  190 (339)
Q Consensus       188 ~~~  190 (339)
                      ++|
T Consensus        78 ~~H   80 (82)
T 2kmk_A           78 RKH   80 (82)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            754

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.58  E-value=1.3e-15  Score=111.69  Aligned_cols=83  Identities=30%  Similarity=0.494  Sum_probs=77.3

Q ss_pred             Ccccccc--ccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHH
Q psy13347        106 NKIRLSS--YFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDEL  183 (339)
Q Consensus       106 ~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L  183 (339)
                      ..+.|..  |++.|.....|..|++.|.++++|.|.++.|++.|.....|..|++.|.++++|.|+  .|++.|.....|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l   81 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ--KCDRAFSRSDHL   81 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECS--SSSCEESSHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCC--CCCcccCCHHHH
Confidence            4678888  999999999999999999999999996445999999999999999999999999999  999999999999


Q ss_pred             Hhhhccc
Q psy13347        184 QVNGGRF  190 (339)
Q Consensus       184 ~~H~~~~  190 (339)
                      ..|+++|
T Consensus        82 ~~H~~~H   88 (89)
T 2wbs_A           82 ALHMKRH   88 (89)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhh
Confidence            9999754

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.57  E-value=6.9e-17  Score=118.53  Aligned_cols=82  Identities=28%  Similarity=0.428  Sum_probs=75.9

Q ss_pred             CCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC--CCcc
Q psy13347        163 ERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR--CTSL  240 (339)
Q Consensus       163 ~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~--C~~C  240 (339)
                      ++||.|+  .|++.|.....|..|++              +|.++++|.|++|++.|.+...|..|+++|++..  |..|
T Consensus         1 ek~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C   64 (88)
T 1llm_C            1 MKPFQCR--ICMRNFSRSDHLTTHIR--------------THTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV   64 (88)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHH--------------HHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHH--------------HcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHH
Confidence            5799999  99999999999999986              6778899999999999999999999999998754  9999


Q ss_pred             ccccCCccccccccccccCC
Q psy13347        241 VMNFSDNTVVTEDSKLELSG  260 (339)
Q Consensus       241 ~~~f~~~~~l~~H~~~~~~~  260 (339)
                      ++.|.++..|..|++.+|..
T Consensus        65 ~~~f~~~~~L~~H~~~~h~~   84 (88)
T 1llm_C           65 EELLSKNYHLENEVARLKKL   84 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhHHHHHHHHHH
Confidence            99999999999999988753

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.57  E-value=1.8e-15  Score=113.42  Aligned_cols=85  Identities=29%  Similarity=0.478  Sum_probs=78.0

Q ss_pred             ccCcccccc--ccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChH
Q psy13347        104 VNNKIRLSS--YFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSD  181 (339)
Q Consensus       104 ~~~~~~c~~--c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~  181 (339)
                      ..+.+.|..  |++.|.....|..|++.|.++++|.|.++.|++.|.....|..|+++|.++++|.|+  +|++.|....
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~   89 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCG--VCNRSFSRSD   89 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCS--SSCCBCSSHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECC--CCcCccCCHH
Confidence            345677886  999999999999999999999999996445999999999999999999999999999  9999999999


Q ss_pred             HHHhhhccc
Q psy13347        182 ELQVNGGRF  190 (339)
Q Consensus       182 ~L~~H~~~~  190 (339)
                      .|..|+++|
T Consensus        90 ~l~~H~~~H   98 (100)
T 2ebt_A           90 HLALHMKRH   98 (100)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999999755

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=5.4e-16  Score=112.49  Aligned_cols=80  Identities=23%  Similarity=0.468  Sum_probs=73.3

Q ss_pred             ceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc--cccccCChhHHHHHHHhhcCCCCCc---
Q psy13347        165 PFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHIKTHSKTRCTS---  239 (339)
Q Consensus       165 ~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~C~~---  239 (339)
                      ||.|+|+.|++.|.....|..|++              +|.++++|.|++  |++.|.+...|..|+++|++..|..   
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~--------------~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~C~~~~~   66 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF--------------SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDS   66 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH--------------HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHSEECCSCSS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH--------------HhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            689943399999999999999986              677889999998  9999999999999999999966999   


Q ss_pred             cccccCCcccccccccccc
Q psy13347        240 LVMNFSDNTVVTEDSKLEL  258 (339)
Q Consensus       240 C~~~f~~~~~l~~H~~~~~  258 (339)
                      |++.|.+...|..|+++||
T Consensus        67 C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           67 CSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CCCEESSHHHHHHHHHHCC
T ss_pred             CCCccCCHHHHHHHHHhcC
Confidence            9999999999999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=7.1e-16  Score=115.56  Aligned_cols=77  Identities=16%  Similarity=0.226  Sum_probs=63.6

Q ss_pred             ccccCCchhHHHHHhhhCCCCceecCccccCCccC-ChHHHHhhhcccCcccchhccccceecC-CCCcCCCccccccCC
Q psy13347        144 NKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFT-RSDELQVNGGRFGIERTVVRILPMTWCR-EKRFQCSECHKKFMR  221 (339)
Q Consensus       144 ~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~-~~~~L~~H~~~~~~~~~~~~~~~~~h~~-~k~~~C~~C~k~F~~  221 (339)
                      ...+.....+..|+++|.++++|.|+  +|++.|. ....|..|++              +|.+ +++|.|.+|++.|.+
T Consensus         3 s~s~~~~~~~~~h~~~h~~~~~~~C~--~C~k~f~~~~~~L~~H~~--------------~h~~~~~~~~C~~C~k~F~~   66 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHERGEAVCP--TCNVVTRKTLVGLKKHME--------------VCQKLQDALKCQHCRKQFKS   66 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTTTSCCCCT--TTCCCCSSCSHHHHHHHH--------------HHHHHHHHHSCSSSCCCCSC
T ss_pred             CCCCCCCCcHHHHHHHhccCCCcCCC--CCCCChhhhHHHHHHHHH--------------HHcCCCCCEECCCCCCccCC
Confidence            34566667778888889888899998  8999998 8888988885              5556 788999999999999


Q ss_pred             hhHHHHHHHhhcCCC
Q psy13347        222 SDHLQKHIKTHSKTR  236 (339)
Q Consensus       222 ~~~L~~H~~~h~~~~  236 (339)
                      +..|..|+++|++++
T Consensus        67 ~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A           67 KAGLNYHTMAEHSAK   81 (98)
T ss_dssp             HHHHHHHHHHHSCSC
T ss_pred             HHHHHHHHHHHcCCC
Confidence            999999998888764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.3e-15  Score=110.79  Aligned_cols=81  Identities=25%  Similarity=0.453  Sum_probs=69.4

Q ss_pred             hHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHh
Q psy13347        152 HLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       152 ~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      +|.+|+++|.++++|.|.  +|++.|.....|..|++.++...          ..+++|.|.+|++.|.+...|..|+++
T Consensus         2 s~~~H~~~H~~~k~~~C~--~C~~~f~~~~~l~~H~~~~~~~~----------~~~~~~~C~~C~~~f~~~~~L~~H~~~   69 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPN----------FVPAAFVCSKCGKTFTRRNTMARHADN   69 (86)
T ss_dssp             TTTCCSTTCCCCCCEECS--SSSCEESSHHHHHHHHHHTTCSS----------CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CcccccceecCCCCCcCC--CCCCccCCHHHHHHHHHHhcCCc----------CCCcceECCCCCChhCCHHHHHHHHHH
Confidence            467899999999999999  99999999999999986443211          013789999999999999999999999


Q ss_pred             hcCCC---CCcccccc
Q psy13347        232 HSKTR---CTSLVMNF  244 (339)
Q Consensus       232 h~~~~---C~~C~~~f  244 (339)
                      |++..   |..|+..|
T Consensus        70 h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           70 CAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCCCCSCCCCCCCCCC
T ss_pred             ccCCCCcccCCCCCCC
Confidence            99887   98888765

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.8e-15  Score=115.66  Aligned_cols=85  Identities=19%  Similarity=0.293  Sum_probs=79.1

Q ss_pred             cccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHH
Q psy13347        103 EVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDE  182 (339)
Q Consensus       103 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~  182 (339)
                      ...+.|.| .|++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|++.|.....
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~   80 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECN--ICAKRFMWRDS   80 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECS--SSCCEESCHHH
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCC--CCcchhcCHHH
Confidence            34567899 89999999999999999999999999977  999999999999999999999999999  99999999999


Q ss_pred             HHhhhcccCc
Q psy13347        183 LQVNGGRFGI  192 (339)
Q Consensus       183 L~~H~~~~~~  192 (339)
                      |..|++.|+.
T Consensus        81 l~~H~~~~~~   90 (110)
T 2csh_A           81 FHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHccc
Confidence            9999976543

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=5.9e-15  Score=105.60  Aligned_cols=72  Identities=31%  Similarity=0.561  Sum_probs=64.7

Q ss_pred             CCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc--cccccCChhHHHHHHHhhcCCC--
Q psy13347        161 TGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHIKTHSKTR--  236 (339)
Q Consensus       161 ~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~--  236 (339)
                      +++++|.|.++.|++.|.....|..|++.             .|.++++|.|++  |++.|.++..|..|+++|++++  
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~-------------~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~   69 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKY-------------QHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY   69 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHH-------------GGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHH-------------HhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCe
Confidence            57889999966699999999999999852             466789999999  9999999999999999999887  


Q ss_pred             -CCccccccC
Q psy13347        237 -CTSLVMNFS  245 (339)
Q Consensus       237 -C~~C~~~f~  245 (339)
                       |.+|++.|.
T Consensus        70 ~C~~C~k~F~   79 (79)
T 2dlk_A           70 ICEFSGPSSG   79 (79)
T ss_dssp             SCCSSSCCCC
T ss_pred             eCCCCCCCCC
Confidence             999999984

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.52  E-value=1.6e-16  Score=125.24  Aligned_cols=82  Identities=24%  Similarity=0.327  Sum_probs=53.8

Q ss_pred             CCeEEeeccccccccC------CchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecC
Q psy13347        133 KKVHICHIEGCNKVYG------KTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCR  206 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~------~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~  206 (339)
                      ++.+.|++  |.+.|.      ....|..|+ .|++++||.|+  +|++.|.....|..|++              +|  
T Consensus        39 ~~~~~c~~--~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~--~C~k~f~~~~~l~~H~~--------------~H--   97 (129)
T 2wbt_A           39 QKRLIRAI--VKTLIHNPQLLDESSYLYRLL-ASKAISQFVCP--LCLMPFSSSVSLKQHIR--------------YT--   97 (129)
T ss_dssp             HHHHHHHH--HHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECT--TTCCEESSHHHHHHHHH--------------HT--
T ss_pred             hCcccchh--hhcccCCCcccCCHHHHHHHH-HhCCCCCeECC--CCCcccCCHhHHHHHHH--------------HC--
Confidence            45566665  665554      444555555 46667777777  77777777777777764              33  


Q ss_pred             CCCcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      ++||.|++|++.|.++..|..|+++|++.
T Consensus        98 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           98 EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            46677777777777777777777777654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.2e-14  Score=103.51  Aligned_cols=69  Identities=28%  Similarity=0.469  Sum_probs=63.0

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceec
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWC  205 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~  205 (339)
                      +...+.++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|++.|.....|..|++              +|+
T Consensus         9 ~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~--------------~H~   70 (77)
T 2cot_A            9 SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAFIQRSHLIGHHR--------------VHT   70 (77)
T ss_dssp             CCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECS--SSCCEESSHHHHHHHGG--------------GSC
T ss_pred             CcCcCCCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCC--CCCCccCCHHHHHHHHH--------------HhC
Confidence            345677789999977  999999999999999999999999999  99999999999999986              677


Q ss_pred             CCCCcCC
Q psy13347        206 REKRFQC  212 (339)
Q Consensus       206 ~~k~~~C  212 (339)
                      +++||+|
T Consensus        71 ~~~p~~C   77 (77)
T 2cot_A           71 GSGPSSG   77 (77)
T ss_dssp             CCCCCCC
T ss_pred             CCCCCCC
Confidence            8899988

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.4e-14  Score=108.03  Aligned_cols=74  Identities=16%  Similarity=0.273  Sum_probs=59.0

Q ss_pred             cccCCchhHHHHHhhhCCCCceecCccccCCcc-CChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChh
Q psy13347        145 KVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRF-TRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSD  223 (339)
Q Consensus       145 k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f-~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~  223 (339)
                      ..|.....|..|++.|.++++|.|+  .|++.| .....|..|++              +| ++++|.|.+|++.|.++.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~--~C~k~F~~~~~~L~~H~~--------------~h-~~k~~~C~~Cgk~F~~~~   76 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCP--TCQAVGRKTIEGLKKHME--------------NC-KQEMFTCHHCGKQLRSLA   76 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECT--TTCSCEESSHHHHHHHHH--------------HH-CCCCCCCSSSCCCCSSHH
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCC--CCCCCcccCHHHHHHHHH--------------HH-CCCCeECCCCCCeeCCHH
Confidence            4566777788888888888888888  888888 88888888875              56 678888888888888888


Q ss_pred             HHHHH-HHhhcCC
Q psy13347        224 HLQKH-IKTHSKT  235 (339)
Q Consensus       224 ~L~~H-~~~h~~~  235 (339)
                      .|..| +++|++.
T Consensus        77 ~L~~H~~~~H~~~   89 (96)
T 2ctd_A           77 GMKYHVMANHNSL   89 (96)
T ss_dssp             HHHHHHHHHTCCC
T ss_pred             HHHHHhHHhcCCC
Confidence            88888 7788754

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.5e-14  Score=101.77  Aligned_cols=58  Identities=33%  Similarity=0.575  Sum_probs=34.2

Q ss_pred             ccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhc
Q psy13347        127 LRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       127 ~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~  188 (339)
                      .++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|++.|.....|..|++
T Consensus         6 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~   63 (72)
T 1x6e_A            6 SGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCL--ECGKAFSQNSGLINHQR   63 (72)
T ss_dssp             CCTTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCSCCEECS--SSCCEESSHHHHHHHHH
T ss_pred             CcccCCCCCccCCC--CCCccCCHHHHHHHHHhcCCCCCeECC--CCCcccCCHHHHHHHHH
Confidence            44555566666644  666666666666666666655666665  55555555555555554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=8.2e-15  Score=104.47  Aligned_cols=64  Identities=25%  Similarity=0.434  Sum_probs=46.6

Q ss_pred             ccccccccCCCCeEEeeccccccccCCchhHHHHHh-hhCCC-CceecCccccCCccCChHHHHhhhccc
Q psy13347        123 FSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLR-WHTGE-RPFVCTWQFCGKRFTRSDELQVNGGRF  190 (339)
Q Consensus       123 l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~~~C~~~f~~~~~L~~H~~~~  190 (339)
                      |.+|+++|+++++|.|.+  |++.|.....|..|++ .|.++ ++|.|+  +|++.|.....|..|++.+
T Consensus         3 ~~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~   68 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCP--HCDTVIARKSDLGVHLRKQ   68 (77)
T ss_dssp             CCCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECS--SSSCEESSHHHHHHHHHHT
T ss_pred             CCccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCC--CCCCccCCHHHHHHHHHHh
Confidence            566777777777777766  7777777777777776 56553 677777  7777777777777777643

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.46  E-value=3.8e-15  Score=117.22  Aligned_cols=115  Identities=15%  Similarity=0.130  Sum_probs=86.2

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccC------ChHHHHhhhcccCcccchhcccc
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFT------RSDELQVNGGRFGIERTVVRILP  201 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~------~~~~L~~H~~~~~~~~~~~~~~~  201 (339)
                      .++.+.++|.|.+.++...|.....+..|.. ...++.|.|+  +|.+.|.      ....|..|+              
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~s~ee~~~~~~l-~~~~~~~~c~--~~~~~~~~~~~~~~~~~l~~h~--------------   67 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHVTLEELKRYHQL-TPEQKRLIRA--IVKTLIHNPQLLDESSYLYRLL--------------   67 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEECCHHHHHHHTTS-CHHHHHHHHH--HHHHHHHCGGGTTTHHHHHHHH--------------
T ss_pred             hhcccccccccccCCeeeeecHHhhhccccC-ChhhCcccch--hhhcccCCCcccCCHHHHHHHH--------------
Confidence            4678889999987555555543332222222 1234667887  8877665      566666665              


Q ss_pred             ceecCCCCcCCCccccccCChhHHHHHHHhhcCCC-CCccccccCCccccccccccccCC
Q psy13347        202 MTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR-CTSLVMNFSDNTVVTEDSKLELSG  260 (339)
Q Consensus       202 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~-C~~C~~~f~~~~~l~~H~~~~~~~  260 (339)
                       .|++++||.|++|++.|.+...|..|+++|.... |..|++.|.++..|..|+++|++.
T Consensus        68 -~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           68 -ASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             -HHHHHCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             -HhCCCCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence             5778999999999999999999999999992222 999999999999999999999854

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=3.1e-14  Score=106.97  Aligned_cols=70  Identities=17%  Similarity=0.198  Sum_probs=62.4

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHh-hh---CCCCceecCccccCCccCChHHHHhh-hcccCcccchhccccce
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLR-WH---TGERPFVCTWQFCGKRFTRSDELQVN-GGRFGIERTVVRILPMT  203 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H---~~~k~~~C~~~~C~~~f~~~~~L~~H-~~~~~~~~~~~~~~~~~  203 (339)
                      ..+++++|.|.+  |++.|..+..|..|++ .|   .+++||.|.  .|++.|.....|..| ++              +
T Consensus        12 ~~~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~--~Cgk~F~~~~~L~~H~~r--------------~   73 (102)
T 2ghf_A           12 NKKVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCV--ECNFLTKRYDALSEHNLK--------------Y   73 (102)
T ss_dssp             CCCCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEET--TTTEEESSTHHHHTHHHH--------------T
T ss_pred             cCCCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCC--CCCcccCCHHHHHHHHHH--------------h
Confidence            346789999977  9999999999999998 59   668999999  999999999999999 64              7


Q ss_pred             ecCCCCcCCCccc
Q psy13347        204 WCREKRFQCSECH  216 (339)
Q Consensus       204 h~~~k~~~C~~C~  216 (339)
                      |++++||.|.++.
T Consensus        74 Htgekpy~C~~~~   86 (102)
T 2ghf_A           74 HPGEENFKLTMVK   86 (102)
T ss_dssp             STTCCCEEEEECC
T ss_pred             cCCCCCeeCCccc
Confidence            8899999999854

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=8.7e-14  Score=99.06  Aligned_cols=67  Identities=16%  Similarity=0.152  Sum_probs=56.1

Q ss_pred             cccccccccCcccccccccccccccccccccc-ccCCC-CeEEeeccccccccCCchhHHHHHhhhCC-CCc
Q psy13347         97 IYKTTAEVNNKIRLSSYFYPALISTLFSCSLR-TADRK-KVHICHIEGCNKVYGKTSHLRAHLRWHTG-ERP  165 (339)
Q Consensus        97 ~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~h~~~-~~~~C~~~~C~k~F~~~~~L~~H~~~H~~-~k~  165 (339)
                      .+.......+.|.|..|++.|.....|..|++ .|.++ ++|+|.+  |++.|.....|..|++.|++ +.|
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCCCCC
Confidence            34445566788999999999999999999997 68765 8999977  99999999999999997544 444

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=7e-14  Score=97.61  Aligned_cols=55  Identities=24%  Similarity=0.483  Sum_probs=32.6

Q ss_pred             cCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhc
Q psy13347        130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       130 h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~  188 (339)
                      |+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|++.|.....|..|++
T Consensus         4 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~   58 (70)
T 1x5w_A            4 GSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCN--YCSFDTKQPSNLSKHMK   58 (70)
T ss_dssp             CCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECS--SSSCEESSHHHHHHHHH
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCC--CCCCccCCHHHHHHHHH
Confidence            44555666644  666666666666666666666666665  56666666655555554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=2.1e-14  Score=107.45  Aligned_cols=71  Identities=17%  Similarity=0.222  Sum_probs=64.2

Q ss_pred             ccccccccccccccCCCCeEEeeccccccccC-CchhHHHHHhhhCC-CCceecCccccCCccCChHHHHhhhcccC
Q psy13347        117 ALISTLFSCSLRTADRKKVHICHIEGCNKVYG-KTSHLRAHLRWHTG-ERPFVCTWQFCGKRFTRSDELQVNGGRFG  191 (339)
Q Consensus       117 ~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~-~~~~L~~H~~~H~~-~k~~~C~~~~C~~~f~~~~~L~~H~~~~~  191 (339)
                      +.....+..|+++|.++++|.|.+  |++.|. ....|..|+++|++ +++|.|.  +|++.|.....|..|+++|+
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~--~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQ--HCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCS--SSCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECC--CCCCccCCHHHHHHHHHHHc
Confidence            344567889999999999999977  999999 99999999999998 9999999  99999999999999997443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=9.9e-14  Score=97.45  Aligned_cols=61  Identities=20%  Similarity=0.164  Sum_probs=56.3

Q ss_pred             ccccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        102 AEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       102 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      ....+.|.|..|++.|.....|..|+++|.++++|+|.+  |++.|.....|..|+++|+++.
T Consensus         9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            445678999999999999999999999999999999977  9999999999999999998764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=1.2e-13  Score=97.61  Aligned_cols=65  Identities=28%  Similarity=0.610  Sum_probs=58.2

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCC
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCRE  207 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~  207 (339)
                      ..+.++++|+|.+  |++.|.....|..|+++|.++++|.|.  +|++.|.....|..|++              +|+++
T Consensus        10 ~~~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~   71 (74)
T 2lce_A           10 HMTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCN--ICGAQFNRPANLKTHTR--------------IHSGE   71 (74)
T ss_dssp             -CCCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEECT--TTCCEESCHHHHHHHHH--------------HHCCS
T ss_pred             cccCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCCCEECC--CCCchhCCHHHHHHHHH--------------hcCCC
Confidence            3466789999977  999999999999999999999999999  99999999999999986              66677


Q ss_pred             CCc
Q psy13347        208 KRF  210 (339)
Q Consensus       208 k~~  210 (339)
                      +||
T Consensus        72 kp~   74 (74)
T 2lce_A           72 KPY   74 (74)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            776

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=6e-14  Score=96.70  Aligned_cols=56  Identities=29%  Similarity=0.602  Sum_probs=26.4

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHhh-h-CCCCceecCccccCCccCChHHHHhhhc
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLRW-H-TGERPFVCTWQFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~-H-~~~k~~~C~~~~C~~~f~~~~~L~~H~~  188 (339)
                      +|+++++|.|.+  |++.|.....|..|++. | .++++|.|+  .|++.|.....|..|++
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~--~C~k~f~~~~~L~~H~~   61 (66)
T 2drp_A            4 TKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCP--FCFKEFTRKDNMTAHVK   61 (66)
T ss_dssp             EEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECT--TTCCEESCHHHHHHHHH
T ss_pred             ccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECC--CCCCccCCHHHHHHHHH
Confidence            344444555533  55555555555555444 3 244444444  44444444444444443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=1.4e-13  Score=97.24  Aligned_cols=62  Identities=24%  Similarity=0.570  Sum_probs=55.7

Q ss_pred             hhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        159 WHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       159 ~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      .+.++++|.|.  .|++.|.....|..|++              .|.++++|.|.+|++.|.++..|..|+++|++++
T Consensus        11 ~~~~~~~~~C~--~C~k~f~~~~~l~~H~~--------------~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           11 MTHSDKPYKCD--RCQASFRYKGNLASHKT--------------VHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCCCSBCCT--TSSCCBSCHHHHHHHHH--------------HHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             ccCCCCCeECC--CCCceeCCHHHHHHHHH--------------HcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            46778999999  99999999999999986              6778899999999999999999999999998864

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=6.7e-14  Score=98.49  Aligned_cols=58  Identities=31%  Similarity=0.759  Sum_probs=33.9

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhc
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~  188 (339)
                      +|.++++|.|.++.|++.|.....|..|+++|.++++|.|+  +|++.|.....|..|++
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHT
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECC--CCCchhCCHHHHHHHHH
Confidence            34555666664223666666666666666666666666665  66666666666666654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.40  E-value=8.9e-14  Score=100.83  Aligned_cols=58  Identities=22%  Similarity=0.512  Sum_probs=47.9

Q ss_pred             ccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhc
Q psy13347        127 LRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       127 ~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~  188 (339)
                      +..+...++|.|++  |++.|.+...|.+|+++|++++||.|+  +|++.|.....|.+|++
T Consensus        20 ~~~~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~   77 (85)
T 2lv2_A           20 LGLSASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCK--YCPATFYSSPGLTRHIN   77 (85)
T ss_dssp             CSSCCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECT--TSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCC--CCCCEeCCHHHHHHhCc
Confidence            45666778888866  888888888888888888888888888  88888888888888864

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=9.5e-14  Score=103.45  Aligned_cols=68  Identities=18%  Similarity=0.245  Sum_probs=61.9

Q ss_pred             cccccccccccccccCCCCeEEeecccccccc-CCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhh-hc
Q psy13347        116 PALISTLFSCSLRTADRKKVHICHIEGCNKVY-GKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVN-GG  188 (339)
Q Consensus       116 ~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F-~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H-~~  188 (339)
                      .+.....|..|++.|.++++|.|.+  |++.| .....|..|+++| ++++|.|.  +|++.|.....|..| ++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~C~--~Cgk~F~~~~~L~~H~~~   84 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-KQEMFTCH--HCGKQLRSLAGMKYHVMA   84 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-CCCCCCCS--SSCCCCSSHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-CCCCeECC--CCCCeeCCHHHHHHHhHH
Confidence            4455667788889999999999977  99999 9999999999999 99999999  999999999999999 75

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.40  E-value=2.2e-13  Score=98.74  Aligned_cols=60  Identities=15%  Similarity=0.129  Sum_probs=54.1

Q ss_pred             cccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHh-hhCCCC
Q psy13347        103 EVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLR-WHTGER  164 (339)
Q Consensus       103 ~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~~k  164 (339)
                      ...+.+.|..|++.|.....|.+|+++|+++++|.|.+  |++.|.+...|.+|++ +|.++.
T Consensus        24 ~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           24 ASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCCC
Confidence            34556899999999999999999999999999999977  9999999999999974 788764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.39  E-value=1.5e-13  Score=91.74  Aligned_cols=57  Identities=28%  Similarity=0.552  Sum_probs=47.8

Q ss_pred             CCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        162 GERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       162 ~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      |+++|.|+  .|++.|.....|..|++              +|.++++|.|++|++.|.+...|..|+++|++
T Consensus         1 g~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECS--YCGKFFRSNYYLNIHLR--------------THTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCT--TTCCBCSCHHHHHHHHH--------------HHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCC--CCcchhCChHHHHHHHH--------------HcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            46789999  99999999999999985              67788999999999999999999999998874

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.6e-14  Score=101.50  Aligned_cols=71  Identities=17%  Similarity=0.211  Sum_probs=64.5

Q ss_pred             cccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhcc
Q psy13347        120 STLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRI  199 (339)
Q Consensus       120 ~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~  199 (339)
                      ...|..|+++|.++++|.|.+  |++.|.....|..       +++|.|+  .|++.|.....|..|++           
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~--~C~~~f~~~~~l~~H~~-----------   60 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCE--KCRKDSCQEAALNKDEG-----------   60 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCH--HHHHTCSCCCSSCCCSS-----------
T ss_pred             chhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCC--CCChhhcCHHHHHHHHH-----------
Confidence            456889999999999999977  9999999998877       7899999  99999999999999985           


Q ss_pred             ccceecCCCCcCCCcc
Q psy13347        200 LPMTWCREKRFQCSEC  215 (339)
Q Consensus       200 ~~~~h~~~k~~~C~~C  215 (339)
                         +|+++++|.|++|
T Consensus        61 ---~H~~~~~~~C~~C   73 (73)
T 2ctu_A           61 ---NESGKKTSGPSSG   73 (73)
T ss_dssp             ---CCCCCCCSSCCCC
T ss_pred             ---hhcCCCCCCCCCC
Confidence               7778999999988

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=3.8e-13  Score=93.84  Aligned_cols=64  Identities=14%  Similarity=0.167  Sum_probs=58.7

Q ss_pred             ccccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCcee
Q psy13347        102 AEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFV  167 (339)
Q Consensus       102 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~  167 (339)
                      ....+.|.|..|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|++.|++++|..
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCCCC
Confidence            345678999999999999999999999999999999977  9999999999999999999988753

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=2.9e-13  Score=96.35  Aligned_cols=63  Identities=32%  Similarity=0.642  Sum_probs=55.1

Q ss_pred             hhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        158 RWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       158 ~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ..+.++++|.|+  +|++.|.....|..|++              +|.++++|.|++|++.|.+...|..|+++|++++
T Consensus        11 ~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   73 (77)
T 2cot_A           11 WQQRERRRYKCD--ECGKSFSHSSDLSKHRR--------------THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG   73 (77)
T ss_dssp             SCCCCSCSSBCS--SSCCBCSCHHHHHHHHT--------------TTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCC
T ss_pred             CcCCCCCCEECC--CCCcccCCHHHHHHHHH--------------HcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            456778899998  99999999999999986              5667889999999999999999999999998875

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=5.3e-13  Score=91.84  Aligned_cols=59  Identities=19%  Similarity=0.183  Sum_probs=53.5

Q ss_pred             ccccCccccccccccccccccccccccc-c-CCCCeEEeeccccccccCCchhHHHHHhhhCC
Q psy13347        102 AEVNNKIRLSSYFYPALISTLFSCSLRT-A-DRKKVHICHIEGCNKVYGKTSHLRAHLRWHTG  162 (339)
Q Consensus       102 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~-h-~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  162 (339)
                      ....+.|.|..|++.|.....|..|++. | .++++|.|.+  |++.|.....|..|++.|++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            3456789999999999999999999998 7 6899999977  99999999999999998875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=3.9e-13  Score=100.92  Aligned_cols=66  Identities=20%  Similarity=0.359  Sum_probs=57.8

Q ss_pred             hCCCCceecCccccCCccCChHHHHhhhcccCcccchhcccccee---cCCCCcCCCccccccCChhHHHHH-HHhhcCC
Q psy13347        160 HTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTW---CREKRFQCSECHKKFMRSDHLQKH-IKTHSKT  235 (339)
Q Consensus       160 H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h---~~~k~~~C~~C~k~F~~~~~L~~H-~~~h~~~  235 (339)
                      -.|++||.|.  .|++.|..+..|..|++.             +|   .+++||.|++||+.|.++..|..| +++|+++
T Consensus        13 ~~gekpy~C~--~Cgk~F~~~~~L~~H~r~-------------~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htge   77 (102)
T 2ghf_A           13 KKVEGGYECK--YCTFQTPDLNMFTFHVDS-------------EHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE   77 (102)
T ss_dssp             CCCCSSEECS--SCSCEESCHHHHHHHHHH-------------HCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTC
T ss_pred             CCCCcCcCCC--CCCCccCCHHHHHHHHHh-------------hCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCC
Confidence            4678999999  999999999999999852             35   468999999999999999999999 8999998


Q ss_pred             C---CCcc
Q psy13347        236 R---CTSL  240 (339)
Q Consensus       236 ~---C~~C  240 (339)
                      +   |.++
T Consensus        78 kpy~C~~~   85 (102)
T 2ghf_A           78 ENFKLTMV   85 (102)
T ss_dssp             CCEEEEEC
T ss_pred             CCeeCCcc
Confidence            8   6553

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.33  E-value=6.8e-13  Score=88.43  Aligned_cols=56  Identities=23%  Similarity=0.583  Sum_probs=50.2

Q ss_pred             ceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        165 PFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       165 ~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ||.|+  .|++.|.....|..|++              +|.++++|.|++|++.|.+...|..|+++|++++
T Consensus         1 p~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICE--ECGIRXKKPSMLKKHIR--------------THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHH--------------HTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCC--CCcCcCCCHHHHHHHHH--------------hcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68898  99999999999999986              6677899999999999999999999999998753

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.32  E-value=5.8e-13  Score=88.76  Aligned_cols=56  Identities=30%  Similarity=0.594  Sum_probs=49.1

Q ss_pred             CCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccC
Q psy13347        132 RKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFG  191 (339)
Q Consensus       132 ~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~  191 (339)
                      ++++|.|.+  |++.|.....|..|+++|.++++|.|+  .|++.|.....|..|++.|+
T Consensus         1 g~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCE--FCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECS--SSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCC--CCcchhCCHHHHHHHHHHhc
Confidence            367899977  999999999999999999999999999  99999999999999997554

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.8e-12  Score=91.09  Aligned_cols=61  Identities=21%  Similarity=0.281  Sum_probs=54.3

Q ss_pred             cccccccCccccc--cccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhC
Q psy13347         99 KTTAEVNNKIRLS--SYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus        99 ~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      .......+.|.|.  .|++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|+++|+
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            3344556789997  69999999999999999999999999977  9999999999999999884

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=8.2e-13  Score=94.14  Aligned_cols=54  Identities=30%  Similarity=0.585  Sum_probs=26.4

Q ss_pred             cCCCCeEEeeccccccccCCchhHHHHHhhhCC---CCceecCccccCCccCChHHHHhhh
Q psy13347        130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTG---ERPFVCTWQFCGKRFTRSDELQVNG  187 (339)
Q Consensus       130 h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~k~~~C~~~~C~~~f~~~~~L~~H~  187 (339)
                      |+++++|.|.+  |++.|.....|..|+++|.+   +++|.|.  +|++.|.....|..|+
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~--~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            2 SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCE--FCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             CCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECT--TTCCEESSHHHHHHHH
T ss_pred             CCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCC--CCCchhCCHHHHHHHH
Confidence            44445555544  55555555555555555543   4444444  4444444444444444

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.7e-12  Score=92.45  Aligned_cols=64  Identities=13%  Similarity=0.109  Sum_probs=56.5

Q ss_pred             ccCccccccccccccccccccccccccCC---CCeEEeeccccccccCCchhHHHHHh-hhCCCCceecC
Q psy13347        104 VNNKIRLSSYFYPALISTLFSCSLRTADR---KKVHICHIEGCNKVYGKTSHLRAHLR-WHTGERPFVCT  169 (339)
Q Consensus       104 ~~~~~~c~~c~~~~~~~~~l~~h~~~h~~---~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~  169 (339)
                      ..+.|.|..|++.|.....|..|+++|.+   +++|.|.+  |++.|.....|..|++ .|.++++....
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            46789999999999999999999999986   89999977  9999999999999994 67777776543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.5e-14  Score=100.45  Aligned_cols=69  Identities=25%  Similarity=0.385  Sum_probs=60.4

Q ss_pred             CchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHH
Q psy13347        149 KTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKH  228 (339)
Q Consensus       149 ~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H  228 (339)
                      +...|..|+++|.++++|.|+  .|++.|.....|..                     +++|.|++|++.|.+...|..|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~--~C~k~f~~~~~l~~---------------------~~~~~C~~C~~~f~~~~~l~~H   58 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCS--KCGIIFIRRSTLSR---------------------RKTPMCEKCRKDSCQEAALNKD   58 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECS--SSCCEEECCCCCCC---------------------SSSCCCHHHHHTCSCCCSSCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCC--cccchhCCHHHhCc---------------------CCCCCCCCCChhhcCHHHHHHH
Confidence            356788999999999999999  99999998877642                     5889999999999999999999


Q ss_pred             HHhhcCCC---CCcc
Q psy13347        229 IKTHSKTR---CTSL  240 (339)
Q Consensus       229 ~~~h~~~~---C~~C  240 (339)
                      +++|++++   |.+|
T Consensus        59 ~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           59 EGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSCCCCCCCSSCCCC
T ss_pred             HHhhcCCCCCCCCCC
Confidence            99999876   7766

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=2.4e-12  Score=86.67  Aligned_cols=56  Identities=36%  Similarity=0.739  Sum_probs=47.7

Q ss_pred             CceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHH-HhhcCC
Q psy13347        164 RPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHI-KTHSKT  235 (339)
Q Consensus       164 k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~h~~~  235 (339)
                      +||.|+  .|++.|.....|..|++              .|+++++|.|++|++.|.++..|..|+ ++|.++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~--------------~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCE--VCTRAFARQEHLKRHYR--------------SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCT--TTCCCBSCHHHHHHHHH--------------TTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCC--CCccccCCHHHHHHHHH--------------HhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            578998  99999999999999986              566788999999999999999999997 577654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.25  E-value=4.5e-12  Score=84.33  Aligned_cols=54  Identities=31%  Similarity=0.543  Sum_probs=49.4

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCc
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGI  192 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~  192 (339)
                      +|.|.+  |++.|.....|..|+++|.++++|.|+  .|++.|.....|..|+++|+.
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHTSSCCCEECS--SSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHHhcCCCCCccCC--CCCchhcCHHHHHHHHHHhcc
Confidence            588977  999999999999999999999999999  999999999999999975543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.23  E-value=1.2e-11  Score=86.63  Aligned_cols=63  Identities=49%  Similarity=0.924  Sum_probs=55.3

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhccc
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRF  190 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~  190 (339)
                      ..+...++|.|.+++|++.|.....|..|+++|.++++|.|.++.|++.|.....|..|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            456678899997777999999999999999999999999997225999999999999998643

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=1.1e-11  Score=83.29  Aligned_cols=51  Identities=33%  Similarity=0.860  Sum_probs=48.0

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhc
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~  188 (339)
                      ++|.|.+  |++.|.....|..|+++|.++++|.|+  .|++.|.....|..|++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~   51 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCG--LCNRAFTRRDLLIRHAQ   51 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECT--TTCCEESSHHHHHHHHT
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCCCccCC--CCCCccCCHHHHHHHHH
Confidence            4799977  999999999999999999999999999  99999999999999973

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.7e-11  Score=77.75  Aligned_cols=45  Identities=27%  Similarity=0.333  Sum_probs=42.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPS--SG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCS--CC
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            6889999999999977  999999999999999999999999998  76

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.8e-11  Score=77.68  Aligned_cols=45  Identities=33%  Similarity=0.459  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSC--CC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            6889999999999977  999999999999999999999999998  76

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.8e-11  Score=77.60  Aligned_cols=45  Identities=24%  Similarity=0.417  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSS--CC
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.6e-11  Score=77.93  Aligned_cols=45  Identities=36%  Similarity=0.524  Sum_probs=42.8

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCC--CC
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            6889999999999977  999999999999999999999999998  77

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.16  E-value=1.8e-11  Score=77.64  Aligned_cols=45  Identities=29%  Similarity=0.304  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+  .|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPS--SG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCT--TC
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.8e-11  Score=77.61  Aligned_cols=45  Identities=31%  Similarity=0.480  Sum_probs=42.8

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|.++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSS--CC
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.1e-11  Score=77.30  Aligned_cols=46  Identities=30%  Similarity=0.489  Sum_probs=43.2

Q ss_pred             cccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        124 SCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       124 ~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      +.|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         1 ~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2eme_A            1 GSSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSC--CC
T ss_pred             CCCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            36889999999999977  999999999999999999999999998  77

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.5e-11  Score=78.06  Aligned_cols=46  Identities=26%  Similarity=0.363  Sum_probs=43.1

Q ss_pred             cccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        124 SCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       124 ~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      +.|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  .|
T Consensus         1 ~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPS--SG   46 (46)
T ss_dssp             CCCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCS--CC
T ss_pred             CCCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCC--CC
Confidence            36889999999999977  999999999999999999999999998  77

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.16  E-value=1.8e-11  Score=77.58  Aligned_cols=45  Identities=31%  Similarity=0.466  Sum_probs=42.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSS--CC
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  76

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.9e-11  Score=77.57  Aligned_cols=45  Identities=36%  Similarity=0.507  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+  +|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCC--CC
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCC--CC
Confidence            6889999999999977  999999999999999999999999998  76

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2e-11  Score=77.39  Aligned_cols=45  Identities=27%  Similarity=0.405  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSS--CC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.9e-11  Score=77.47  Aligned_cols=45  Identities=33%  Similarity=0.454  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|.+++||.|+  +|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPS--SG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSC--CC
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2e-11  Score=77.42  Aligned_cols=45  Identities=36%  Similarity=0.486  Sum_probs=42.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.+++||.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCS--CC
T ss_pred             CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=2.2e-11  Score=76.45  Aligned_cols=44  Identities=23%  Similarity=0.295  Sum_probs=41.7

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      |+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPS--SG   44 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCC--CC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            678999999999977  999999999999999999999999998  76

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.4e-11  Score=77.01  Aligned_cols=45  Identities=22%  Similarity=0.217  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  .|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPS--SG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCC--CC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            6889999999999977  999999999999999999999999998  77

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.7e-11  Score=77.71  Aligned_cols=45  Identities=36%  Similarity=0.460  Sum_probs=42.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCC--CC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  76

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.4e-11  Score=77.03  Aligned_cols=45  Identities=31%  Similarity=0.445  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  .|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPS--SG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCC--CC
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            6889999999999977  999999999999999999999999998  77

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.15  E-value=1.7e-11  Score=77.80  Aligned_cols=45  Identities=33%  Similarity=0.463  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  .|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCC--CC
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            6889999999999977  999999999999999999999999998  76

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.2e-11  Score=77.26  Aligned_cols=45  Identities=29%  Similarity=0.396  Sum_probs=42.5

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|.++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCC--CC
T ss_pred             ccccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            4889999999999977  999999999999999999999999998  76

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.5e-11  Score=76.97  Aligned_cols=45  Identities=31%  Similarity=0.431  Sum_probs=42.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  .|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPS--SG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSS--CC
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.14  E-value=2.1e-11  Score=90.10  Aligned_cols=63  Identities=21%  Similarity=0.240  Sum_probs=56.5

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhh-hCCCCc--------eecCccccCCccCChHHHHhhhcccCcccchhccccce
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRW-HTGERP--------FVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMT  203 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~-H~~~k~--------~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~  203 (339)
                      ...|.|.+  |++.|.....|.+|++. |.++++        |.|+  .|++.|.....|..|++              +
T Consensus        23 ~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~--~C~k~f~~~~~L~~H~~--------------~   84 (95)
T 2ej4_A           23 QLSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP--REGKSFKAKYKLVNHIR--------------V   84 (95)
T ss_dssp             CSSSSCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCS--STTCCCSSHHHHHHHHH--------------H
T ss_pred             cCCCcccc--cccccCCHHHHHHHHHHhccCCCCCCccceeccCCC--CCCcccCCHHHHHHHHH--------------h
Confidence            34578966  99999999999999998 988887        9999  99999999999999985              7


Q ss_pred             ecCCCCcCCC
Q psy13347        204 WCREKRFQCS  213 (339)
Q Consensus       204 h~~~k~~~C~  213 (339)
                      |++++||.|+
T Consensus        85 H~~~k~~~C~   94 (95)
T 2ej4_A           85 HTGEKSGPSS   94 (95)
T ss_dssp             HHTCCCCSSC
T ss_pred             cCCCCCCCCC
Confidence            8899999996

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.8e-11  Score=77.60  Aligned_cols=45  Identities=29%  Similarity=0.366  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCC--CC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  76

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.4e-11  Score=77.07  Aligned_cols=45  Identities=33%  Similarity=0.428  Sum_probs=42.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|+++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCC--CC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.2e-11  Score=85.18  Aligned_cols=58  Identities=28%  Similarity=0.578  Sum_probs=49.5

Q ss_pred             hCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC-ccccccCChhHHHHHHHhhcCC
Q psy13347        160 HTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS-ECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       160 H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~-~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      ..++++|.|.  .|++.|. ...|..|++              + ++++||.|+ .|++.|..+..|..|+++|...
T Consensus         5 ~C~~~~~~C~--~C~k~f~-~~~L~~H~~--------------~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            5 SSGKRTQPCT--YCTKEFV-FDTIQSHQY--------------Q-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCCCEEECS--SSCCEEE-HHHHHHHHH--------------H-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             cCCCCCeecc--ccCCccC-HHHHHHHHH--------------H-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            3467889998  9999999 999999985              4 678999999 9999999999999999988643

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.14  E-value=1.8e-11  Score=77.68  Aligned_cols=45  Identities=27%  Similarity=0.387  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  .|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSS--CC
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCC--CC
Confidence            6889999999999977  999999999999999999999999998  77

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.8e-11  Score=77.65  Aligned_cols=45  Identities=29%  Similarity=0.352  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+  +|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCC--CC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            6889999999999977  999999999999999999999999998  77

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.1e-11  Score=77.29  Aligned_cols=45  Identities=33%  Similarity=0.458  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSC--CC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.4e-11  Score=76.99  Aligned_cols=45  Identities=31%  Similarity=0.364  Sum_probs=42.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  .|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPS--SG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCS--CC
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.9e-11  Score=77.57  Aligned_cols=45  Identities=29%  Similarity=0.466  Sum_probs=42.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~--~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSC--CC
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  76

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.9e-11  Score=77.50  Aligned_cols=45  Identities=27%  Similarity=0.412  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.+...|.+|+++|+++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCC--CC
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2e-11  Score=77.46  Aligned_cols=45  Identities=33%  Similarity=0.449  Sum_probs=42.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  .|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSC--CC
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.7e-11  Score=76.77  Aligned_cols=45  Identities=33%  Similarity=0.413  Sum_probs=42.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSC--CC
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.9e-11  Score=77.44  Aligned_cols=45  Identities=33%  Similarity=0.426  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+  .|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPS--SG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCC--CC
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            6889999999999977  999999999999999999999999998  77

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.8e-11  Score=76.73  Aligned_cols=43  Identities=30%  Similarity=0.432  Sum_probs=41.2

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      +|+++|+++++|.|.+  |++.|.....|.+|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            6889999999999977  999999999999999999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.13  E-value=2.4e-11  Score=77.09  Aligned_cols=45  Identities=29%  Similarity=0.402  Sum_probs=42.5

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|+++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCC--CC
T ss_pred             CCCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            4789999999999977  999999999999999999999999998  77

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.9e-11  Score=76.66  Aligned_cols=45  Identities=27%  Similarity=0.260  Sum_probs=42.4

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTT--CC
T ss_pred             CCCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            4789999999999977  999999999999999999999999998  77

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.4e-11  Score=76.97  Aligned_cols=45  Identities=31%  Similarity=0.341  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPS--SG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSC--CC
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.13  E-value=3.2e-11  Score=76.41  Aligned_cols=45  Identities=29%  Similarity=0.337  Sum_probs=42.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPS--SG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTT--CC
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.4e-11  Score=77.01  Aligned_cols=45  Identities=29%  Similarity=0.356  Sum_probs=42.3

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|+++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSC--CC
T ss_pred             CCCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            4789999999999977  999999999999999999999999998  77

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.12  E-value=3.8e-11  Score=76.14  Aligned_cols=45  Identities=24%  Similarity=0.278  Sum_probs=42.5

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  +|
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPS--SG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCC--CC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            5789999999999977  999999999999999999999999998  77

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.3e-11  Score=76.40  Aligned_cols=45  Identities=31%  Similarity=0.382  Sum_probs=42.4

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|.++++|.|+  +|
T Consensus         2 ~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPS--SG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCS--CC
T ss_pred             CCCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCC--CC
Confidence            4789999999999977  999999999999999999999999998  77

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3e-11  Score=76.64  Aligned_cols=45  Identities=27%  Similarity=0.310  Sum_probs=42.3

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.+++||.|+  +|
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPS--SG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSC--CC
T ss_pred             CCCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            4789999999999977  999999999999999999999999998  77

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3.9e-11  Score=76.02  Aligned_cols=45  Identities=27%  Similarity=0.333  Sum_probs=42.4

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  +|
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPS--SG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSC--CC
T ss_pred             CCCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCC--CC
Confidence            4789999999999977  999999999999999999999999998  77

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=4.3e-11  Score=75.86  Aligned_cols=45  Identities=22%  Similarity=0.317  Sum_probs=42.4

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|.  .|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPS--SG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTT--CC
T ss_pred             CcccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            5789999999999977  999999999999999999999999998  77

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.1e-11  Score=76.57  Aligned_cols=45  Identities=29%  Similarity=0.372  Sum_probs=42.3

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.+...|.+|+++|+++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPS--SG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCC--CC
T ss_pred             CCCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCC--CC
Confidence            4789999999999977  999999999999999999999999998  77

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.4e-11  Score=76.97  Aligned_cols=45  Identities=33%  Similarity=0.454  Sum_probs=42.7

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSC--CC
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence            5889999999999977  999999999999999999999999998  77

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.3e-11  Score=75.89  Aligned_cols=45  Identities=29%  Similarity=0.284  Sum_probs=42.3

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPS--SG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSC--CC
T ss_pred             CCCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCC--CC
Confidence            4789999999999977  999999999999999999999999998  77

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6e-11  Score=75.19  Aligned_cols=43  Identities=35%  Similarity=0.568  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4789999999999977  999999999999999999999999997

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.09  E-value=3.6e-11  Score=84.03  Aligned_cols=59  Identities=37%  Similarity=0.718  Sum_probs=47.2

Q ss_pred             hCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc--cccccCChhHHHHHHHhh
Q psy13347        160 HTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE--CHKKFMRSDHLQKHIKTH  232 (339)
Q Consensus       160 H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h  232 (339)
                      +...++|.|.++.|++.|.....|..|++              +|+++++|.|.+  |++.|.++..|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTR--------------THTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHH--------------HHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHH--------------hcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45667889972239999999999988885              667788899965  999999999999888776

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.08  E-value=3.4e-11  Score=76.33  Aligned_cols=45  Identities=20%  Similarity=0.287  Sum_probs=41.7

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCR--ECDMCFSQASSLRLHQN--------------VHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCS--SSCCCCSSHHHHHHHGG--------------GGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECC--CCCcccCCHHHHHHHHH--------------HcCCCCCcCCCCC
Confidence            588999999999999  99999999999999986              6778999999987

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.08  E-value=7.2e-11  Score=73.17  Aligned_cols=42  Identities=21%  Similarity=0.352  Sum_probs=39.6

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      |+++|+++++|.|.+  |++.|.+...|..|+++|.++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            678999999999977  999999999999999999999999984

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.1e-11  Score=76.55  Aligned_cols=45  Identities=31%  Similarity=0.427  Sum_probs=42.2

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.+...|.+|+++|.++++|.|+  +|
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPS--SG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCC--CC
T ss_pred             CCCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            3789999999999977  999999999999999999999999998  77

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.08  E-value=3.4e-11  Score=76.27  Aligned_cols=45  Identities=24%  Similarity=0.318  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCS--QCAKTFSLKSQLIVHQR--------------SHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECS--SSSCEESSHHHHHHHGG--------------GSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECC--CCCchhCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7778999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.4e-11  Score=76.34  Aligned_cols=45  Identities=31%  Similarity=0.452  Sum_probs=41.7

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCN--ECGKVFTQNSHLARHRG--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCT--TTCCBCSSHHHHHHHGG--------------GTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECC--CCCCeeCCHHHHHHHhh--------------hcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999987

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.6e-11  Score=74.67  Aligned_cols=43  Identities=30%  Similarity=0.529  Sum_probs=41.1

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999977  999999999999999999999999996

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.08  E-value=3.5e-11  Score=76.27  Aligned_cols=45  Identities=29%  Similarity=0.383  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  .|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCN--ECGKVFSRNSQLSQHQK--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECS--SSCCEESSHHHHHHHHT--------------GGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCC--CCcchhCCHHHHHHHHH--------------hcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7778999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.5e-11  Score=76.27  Aligned_cols=45  Identities=29%  Similarity=0.468  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECS--VCGKAFSHRQSLSVHQR--------------IHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECS--SSCCEESSHHHHHHHHG--------------GGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCC--CcCCccCCHHHHHHHHH--------------HhcCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999988

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.07  E-value=8.2e-11  Score=74.54  Aligned_cols=43  Identities=33%  Similarity=0.478  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999996

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.7e-11  Score=75.70  Aligned_cols=45  Identities=33%  Similarity=0.397  Sum_probs=41.5

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  .|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECT--ECGKAFTRKSTLSMHQK--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECS--SSCCEESCHHHHHHHGG--------------GTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECC--CCCchhCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            488999999999999  99999999999999986              6778999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.06  E-value=3.4e-11  Score=76.38  Aligned_cols=45  Identities=29%  Similarity=0.409  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  +|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECK--ECGKAFSQTTHLIQHQR--------------VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCS--SSCCBCSCHHHHHHHHH--------------HHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECC--CCCchhCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7788999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.4e-11  Score=76.30  Aligned_cols=45  Identities=33%  Similarity=0.375  Sum_probs=41.9

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCN--ECGKSFIQSAHLIQHQR--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECS--SSCCEESSHHHHHHHHH--------------HHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCC--CCChhhCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7788999999988

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.7e-11  Score=74.42  Aligned_cols=43  Identities=30%  Similarity=0.461  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|+|.+  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999996

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.6e-11  Score=76.19  Aligned_cols=45  Identities=29%  Similarity=0.324  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  .|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCK--ECGKSFSRAPCLLKHER--------------LHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBT--TTTBCCSCHHHHHHHHH--------------HCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECC--CCCCccCchHHHHHHHH--------------hcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7788999999988

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.4e-11  Score=73.61  Aligned_cols=43  Identities=30%  Similarity=0.390  Sum_probs=40.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            6889999999999977  999999999999999999999999984

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4e-11  Score=76.00  Aligned_cols=45  Identities=31%  Similarity=0.386  Sum_probs=41.6

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCH--ECGKVFRRNSHLARHQL--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECT--TTCCEESSHHHHHHHHT--------------TTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECC--CCCchhCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            478899999999999  99999999999999986              6778999999988

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.7e-11  Score=75.22  Aligned_cols=45  Identities=31%  Similarity=0.414  Sum_probs=42.5

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHh-hhCCCCceecCcccc
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLR-WHTGERPFVCTWQFC  173 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~~~C  173 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|++ +|.+++||.|+  .|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~--~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPS--SG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCC--CC
T ss_pred             ccccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCC--CC
Confidence            5889999999999977  9999999999999999 99999999998  77

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.2e-11  Score=75.86  Aligned_cols=45  Identities=29%  Similarity=0.359  Sum_probs=41.6

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  .|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECR--ECGKSFSFNSQLIVHQR--------------IHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCT--TTCCBCSSHHHHHHHHT--------------TTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCC--CCCchhCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999987

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.2e-11  Score=74.22  Aligned_cols=43  Identities=28%  Similarity=0.396  Sum_probs=41.0

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999997

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.5e-11  Score=76.25  Aligned_cols=45  Identities=27%  Similarity=0.352  Sum_probs=42.0

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCN--ECGKAFSVYSSLTTHQV--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECS--SSCCEESCHHHHHHHHH--------------HHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECC--CCCchhCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7888999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.4e-11  Score=75.80  Aligned_cols=45  Identities=29%  Similarity=0.429  Sum_probs=41.7

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  .|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICA--ECGKAFTIRSNLIKHQK--------------IHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECS--SSCCEESSHHHHHHHHH--------------HTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECC--CCChhhCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.1e-11  Score=75.92  Aligned_cols=45  Identities=29%  Similarity=0.377  Sum_probs=41.7

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  +|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQR--------------VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECT--TTCCEESSSHHHHTTGG--------------GGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECC--CCCcccCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.2e-11  Score=75.13  Aligned_cols=45  Identities=24%  Similarity=0.330  Sum_probs=41.5

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCE--DCGKGYNRRLNLDMHQR--------------VHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCS--SSCCBCSSHHHHHHHGG--------------GGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCc--ccCchhCCHHHHHHHHH--------------hcCCCCCCCCCCC
Confidence            378899999999999  99999999999999986              7778999999988

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=9.8e-11  Score=74.17  Aligned_cols=43  Identities=30%  Similarity=0.410  Sum_probs=40.8

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|+|.+  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4789999999999977  999999999999999999999999997

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=5.9e-11  Score=75.18  Aligned_cols=45  Identities=29%  Similarity=0.356  Sum_probs=41.5

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCE--ECGKGFICRRDLYTHHM--------------VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECS--SSCCEESCHHHHHHHGG--------------GGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCC--CccchhCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            478899999999999  99999999999999986              6778999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.5e-11  Score=76.27  Aligned_cols=45  Identities=36%  Similarity=0.490  Sum_probs=41.9

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICT--VCGKAFTDRSNLIKHQK--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECT--TTCCEESSHHHHHHHHH--------------HHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCC--CCCchhCCHHHHHHHHH--------------hcCCCCCCCCCCC
Confidence            588999999999999  99999999999999985              7888999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.5e-11  Score=75.31  Aligned_cols=45  Identities=33%  Similarity=0.481  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCD--YCGKAFGLSAELVRHQR--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECS--SSCCEESSHHHHHHHHG--------------GGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECC--CCChhhCCHHHHHHHHH--------------hcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=4.2e-11  Score=75.91  Aligned_cols=45  Identities=20%  Similarity=0.218  Sum_probs=41.7

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCH--ECGRGFTLKSHLNQHQR--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECS--SSCCEESSHHHHHHHHT--------------TTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECC--cCCCccCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.5e-11  Score=75.75  Aligned_cols=45  Identities=33%  Similarity=0.532  Sum_probs=41.7

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECS--ICGKSFTKKSQLHVHQQ--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECS--SSCCEESSHHHHHHHHH--------------TTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCC--CCCcccCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999987

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.9e-11  Score=74.08  Aligned_cols=43  Identities=37%  Similarity=0.538  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            5889999999999977  999999999999999999999999996

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.7e-11  Score=74.19  Aligned_cols=43  Identities=30%  Similarity=0.417  Sum_probs=41.0

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999977  999999999999999999999999996

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.05  E-value=5.3e-11  Score=75.35  Aligned_cols=45  Identities=29%  Similarity=0.355  Sum_probs=41.7

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|+++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCK--ECGKSFRWASCLLKHQR--------------VHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECS--SSCCEESSHHHHHHHGG--------------GGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECC--ccccccCChHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            488999999999999  99999999999999986              6778999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.5e-11  Score=75.31  Aligned_cols=45  Identities=31%  Similarity=0.358  Sum_probs=41.4

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCI--DCGKAFSDHIGLNQHRR--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCT--TTCCCBSSHHHHHHHHT--------------TTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECC--CCCceeCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            378899999999999  99999999999999986              6778999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.8e-11  Score=76.09  Aligned_cols=45  Identities=29%  Similarity=0.384  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCN--ECGKVFTQNSHLTNHWR--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECS--SSCCEESSHHHHHHHHH--------------HHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCC--cCCCccCCHHHHHHHHH--------------HHCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7788999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5e-11  Score=75.53  Aligned_cols=45  Identities=29%  Similarity=0.367  Sum_probs=41.6

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|+++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCN--ECGKVFRHNSYLSRHQR--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECS--SSCCEESSHHHHHHHHT--------------TTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECC--CCCchhCChHHHHHHHh--------------hcCCCCCCCCCCC
Confidence            488999999999999  99999999999999986              6778899999988

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.8e-11  Score=74.11  Aligned_cols=43  Identities=33%  Similarity=0.468  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999997

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=4.4e-11  Score=75.75  Aligned_cols=45  Identities=24%  Similarity=0.313  Sum_probs=41.7

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|+++++|+|+.|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCD--ECGKNFCYISALRIHQR--------------VHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECT--TTCCEESSHHHHHHHHT--------------TTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECC--CcCcccCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.7e-11  Score=76.13  Aligned_cols=45  Identities=29%  Similarity=0.372  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLANHQR--------------IHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEET--TTTEECSSHHHHHHHHG--------------GGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECC--CcChhhCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.8e-11  Score=76.07  Aligned_cols=45  Identities=33%  Similarity=0.420  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECH--ECGKAFSRKYQLISHQR--------------THAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECS--SSCCEESSHHHHHHHHH--------------HHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCC--CCCcccCcHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7788999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.3e-11  Score=75.07  Aligned_cols=45  Identities=29%  Similarity=0.391  Sum_probs=41.4

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|.+|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCS--ECGKAFSSKSYLIIHMR--------------THSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCS--SSCCBCSCHHHHHHHHT--------------TTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCC--ccChhhCChHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            378899999999999  99999999999999986              6778999999988

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1.4e-10  Score=76.24  Aligned_cols=48  Identities=29%  Similarity=0.560  Sum_probs=44.4

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHh-hhCCCCceecCccccCCccCC
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLR-WHTGERPFVCTWQFCGKRFTR  179 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~~~C~~~f~~  179 (339)
                      ..|.++++|.|.+  |++.|.....|.+|++ +|.++++|.|+  +|++.|.+
T Consensus         5 ~~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~--~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ--VWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSS--SSCCSSCC
T ss_pred             CCCCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCC--CCCCCCCC
Confidence            4578899999977  9999999999999997 99999999999  99999976

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=9.4e-11  Score=74.25  Aligned_cols=43  Identities=30%  Similarity=0.376  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      +|+++|+++++|+|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999996

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.3e-10  Score=72.86  Aligned_cols=43  Identities=19%  Similarity=0.271  Sum_probs=40.5

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999984

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=4.7e-11  Score=74.88  Aligned_cols=44  Identities=32%  Similarity=0.429  Sum_probs=40.9

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      |+++|.++++|.|+  .|++.|.....|..|++              +|+++++|.|++|
T Consensus         1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCS--CCEKAFSSKSYLLVHQQ--------------THAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECS--SSSCEESSHHHHHHHHH--------------HHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCC--CCCcccCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            67899999999999  99999999999999986              7788999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.5e-11  Score=75.72  Aligned_cols=45  Identities=29%  Similarity=0.459  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCS--DCGKSFTWKSRLRIHQK--------------CHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCS--SSCCBCSSHHHHHHHHH--------------HHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCC--ccChhhCCHHHHHHHHH--------------hcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7778999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.6e-11  Score=75.64  Aligned_cols=45  Identities=29%  Similarity=0.427  Sum_probs=41.6

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  +|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCN--ECGKAFSQTSKLARHQR--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCT--TTCCCCSSHHHHHHHHT--------------TTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCC--CCCCccCCHHHHHHHHH--------------hcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778899999988

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=73.79  Aligned_cols=43  Identities=30%  Similarity=0.474  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999996

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4e-11  Score=76.01  Aligned_cols=45  Identities=33%  Similarity=0.425  Sum_probs=42.0

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCN--ECGKNFGRHSHLIEHLK--------------RHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECS--SSCCEESSHHHHHHHHH--------------HHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEcc--ccCcccCCHHHHHHHHH--------------HHcCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7888999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.5e-11  Score=75.73  Aligned_cols=45  Identities=31%  Similarity=0.431  Sum_probs=41.7

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCD--ICGKSFCGRSRLNRHSM--------------VHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCS--SSCCCCSSHHHHHHHHH--------------HTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCC--cCCchhCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.04  E-value=8.9e-11  Score=86.63  Aligned_cols=61  Identities=16%  Similarity=0.060  Sum_probs=56.9

Q ss_pred             ccccccccccccccccccccccc-cCCCCe--------EEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        107 KIRLSSYFYPALISTLFSCSLRT-ADRKKV--------HICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       107 ~~~c~~c~~~~~~~~~l~~h~~~-h~~~~~--------~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .+.|..|++.|.....|..|+++ |.++++        |.|.+  |++.|.....|..|+++|++++||.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            45799999999999999999998 988877        99977  999999999999999999999999996

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=8.6e-11  Score=74.37  Aligned_cols=43  Identities=35%  Similarity=0.437  Sum_probs=41.0

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999977  999999999999999999999999996

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.3e-10  Score=73.53  Aligned_cols=43  Identities=28%  Similarity=0.409  Sum_probs=40.8

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            4889999999999977  999999999999999999999999996

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=9.4e-11  Score=72.59  Aligned_cols=42  Identities=17%  Similarity=0.259  Sum_probs=39.4

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      |+++|+++++|.|.+  |++.|.....|.+|+++|.++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            678899999999977  999999999999999999999999984

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.04  E-value=5e-11  Score=75.56  Aligned_cols=45  Identities=36%  Similarity=0.474  Sum_probs=41.6

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCV--ECGKGFSRRSALNVHHK--------------LHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCS--SSCCCBSSTTHHHHHHH--------------HHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccC--ccCcccCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            478999999999999  99999999999999986              7778999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.8e-11  Score=76.07  Aligned_cols=45  Identities=29%  Similarity=0.386  Sum_probs=41.9

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  .|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLARHRR--------------VHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECS--SSCCEESSSHHHHHHTH--------------HHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECC--cCCchhCCHHHHHHHHH--------------hcCCCCCCCCCCC
Confidence            588899999999999  99999999999999985              7888999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.8e-11  Score=75.59  Aligned_cols=45  Identities=24%  Similarity=0.372  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCS--ECGKAFHRHTHLNEHRR--------------IHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECS--SSCCEESSHHHHHHHHH--------------HHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECC--CCCCeeCChHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7788999999988

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9.3e-11  Score=74.24  Aligned_cols=43  Identities=35%  Similarity=0.492  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999997

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.1e-11  Score=75.43  Aligned_cols=45  Identities=31%  Similarity=0.404  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCT--ECGKAFCWKSQLIMHQR--------------THVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECS--SSCCEESSSHHHHHHHH--------------HCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCC--CCCCccCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              7788999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.5e-11  Score=75.32  Aligned_cols=45  Identities=33%  Similarity=0.497  Sum_probs=41.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCE--ECGKRFTQNSQLHSHQR--------------VHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEET--TTTEEESSHHHHHHHGG--------------GGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCC--CCCcccCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.1e-10  Score=73.08  Aligned_cols=43  Identities=19%  Similarity=0.272  Sum_probs=40.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            6889999999999977  999999999999999999999999984

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1e-10  Score=74.13  Aligned_cols=43  Identities=35%  Similarity=0.542  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            6889999999999977  999999999999999999999999996

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.03  E-value=2.9e-11  Score=82.08  Aligned_cols=57  Identities=14%  Similarity=0.383  Sum_probs=50.7

Q ss_pred             ccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhh
Q psy13347        123 FSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVN  186 (339)
Q Consensus       123 l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H  186 (339)
                      |..|+++|+++++|.|.+  |++.|.....|.   ++|.++++|.|+  .|++.|.....+..+
T Consensus         2 L~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~--~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCT--FCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCS--SSCCBCEECTTCSCC
T ss_pred             hhhHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECC--CCCCccccCcccccc
Confidence            678999999999999977  999999988886   889999999999  999999988766543

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.5e-11  Score=74.99  Aligned_cols=45  Identities=31%  Similarity=0.401  Sum_probs=41.3

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +|+++|+++++|.|+  .|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCA--ECGKAFTDRSNLFTHQK--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECS--SSCCEESSHHHHHHHHT--------------TTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECC--CCCchhCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            588999999999999  99999999999999986              6778999999876

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.2e-10  Score=72.98  Aligned_cols=43  Identities=21%  Similarity=0.349  Sum_probs=40.4

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999977  999999999999999999999999984

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.02  E-value=7.6e-11  Score=74.70  Aligned_cols=45  Identities=27%  Similarity=0.324  Sum_probs=41.5

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCS--QCEKSFSGKLRLLVHQR--------------MHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECS--SSSCEESSHHHHHHHHG--------------GGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECC--CCCcccCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            478899999999999  99999999999999986              6778999999988

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.7e-11  Score=74.16  Aligned_cols=43  Identities=35%  Similarity=0.489  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999996

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=72.73  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=40.5

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999977  999999999999999999999999883

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.02  E-value=1.1e-11  Score=84.18  Aligned_cols=54  Identities=22%  Similarity=0.377  Sum_probs=47.5

Q ss_pred             HHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHH
Q psy13347        153 LRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHL  225 (339)
Q Consensus       153 L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L  225 (339)
                      |..|+++|.+++||.|+  .|++.|.....|.  .               +|+++++|.|++|++.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~--~C~k~F~~~~~l~--~---------------~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCP--VCSSTFTDLEANQ--L---------------FDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECS--SSCCEEEHHHHHH--H---------------EETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCC--CCCchhccHHHhH--h---------------hcCCCCCEECCCCCCccccCccc
Confidence            56789999999999999  9999999988875  2               88899999999999999887654

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=73.79  Aligned_cols=43  Identities=35%  Similarity=0.579  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999997

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=8.3e-11  Score=74.48  Aligned_cols=45  Identities=27%  Similarity=0.363  Sum_probs=41.5

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCE--ECGKGFYTNSQCYSHQR--------------SHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECS--SSCCEESSHHHHHHHHH--------------HSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCC--CCCCcCCChHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            478899999999999  99999999999999986              7778999999988

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=73.63  Aligned_cols=43  Identities=33%  Similarity=0.461  Sum_probs=40.8

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999997

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.9e-11  Score=74.13  Aligned_cols=43  Identities=35%  Similarity=0.503  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999996

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1e-10  Score=73.27  Aligned_cols=43  Identities=30%  Similarity=0.365  Sum_probs=40.5

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999984

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=72.97  Aligned_cols=44  Identities=32%  Similarity=0.436  Sum_probs=41.1

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      ++++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+  +|
T Consensus         3 ~~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPS--SG   46 (46)
T ss_dssp             CCCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCC--CC
T ss_pred             CCCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCC--CC
Confidence            467899999999977  999999999999999999999999998  77

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.7e-11  Score=74.94  Aligned_cols=45  Identities=24%  Similarity=0.375  Sum_probs=41.5

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCE--KCGKGYNSKFNLDMHQK--------------VHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEET--TTTEEESCHHHHHHHHT--------------TSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECC--CCCCccCCHHHHHHHHH--------------hhCCCCCCCCCCC
Confidence            478899999999999  99999999999999986              6778999999988

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=73.75  Aligned_cols=43  Identities=35%  Similarity=0.446  Sum_probs=40.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4789999999999977  999999999999999999999999996

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.8e-11  Score=72.50  Aligned_cols=42  Identities=29%  Similarity=0.461  Sum_probs=39.5

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceec
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVC  168 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C  168 (339)
                      +|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4789999999999977  99999999999999999999999988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=73.31  Aligned_cols=43  Identities=28%  Similarity=0.414  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999996

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=73.74  Aligned_cols=43  Identities=30%  Similarity=0.430  Sum_probs=40.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999996

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=73.46  Aligned_cols=43  Identities=35%  Similarity=0.554  Sum_probs=40.8

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5789999999999977  999999999999999999999999996

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.00  E-value=2.1e-10  Score=70.99  Aligned_cols=41  Identities=20%  Similarity=0.312  Sum_probs=39.1

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceec
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVC  168 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C  168 (339)
                      |+++|+++++|.|.+  |++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            778999999999977  99999999999999999999999988

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=1.7e-10  Score=75.83  Aligned_cols=49  Identities=22%  Similarity=0.433  Sum_probs=43.2

Q ss_pred             hhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCCh
Q psy13347        159 WHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRS  222 (339)
Q Consensus       159 ~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~  222 (339)
                      .|.++++|.|+  +|++.|.....|..|++.             +|.++++|.|++|++.|.++
T Consensus         6 ~~~~~k~~~C~--~C~k~f~~~~~L~~H~~~-------------~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            6 SGSVGKPYICQ--SCGKGFSRPDHLNGHIKQ-------------VHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCCSSCCEECS--SSCCEESSHHHHHHHHHH-------------TSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCCeECC--CCCcccCCHHHHHHHHHH-------------hcCCCCCccCCCCCCCCCCC
Confidence            47789999999  999999999999999841             57788999999999999863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.4e-10  Score=73.38  Aligned_cols=43  Identities=33%  Similarity=0.518  Sum_probs=40.8

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999997

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=9.1e-11  Score=74.30  Aligned_cols=45  Identities=18%  Similarity=0.113  Sum_probs=41.6

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  .|++.|.....|..|++              +|+++++|+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCR--ECGEIFFQYVSLIEHQV--------------LHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECT--TTCCEESSHHHHHHHHH--------------HHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEcc--ccChhhCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            478899999999999  99999999999999986              7788999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=73.63  Aligned_cols=43  Identities=23%  Similarity=0.285  Sum_probs=40.8

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999995

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.2e-11  Score=74.83  Aligned_cols=45  Identities=22%  Similarity=0.316  Sum_probs=41.6

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCM--ECGKAFGDNSSCTQHQR--------------LHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBT--TTTBCCSSHHHHHHHHH--------------HHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCC--CCCchhCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            378899999999999  99999999999999986              7888999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.7e-11  Score=75.24  Aligned_cols=45  Identities=29%  Similarity=0.413  Sum_probs=41.7

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|++++||.|++|
T Consensus         2 ~h~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCN--ECGKTFSQKSILSAHQR--------------THTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEET--TTTEEESSHHHHHHHHH--------------HHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECC--CCCcccCchHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            578899999999999  99999999999999986              7778999999988

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.3e-10  Score=72.45  Aligned_cols=43  Identities=23%  Similarity=0.364  Sum_probs=40.6

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCC-CCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTG-ERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++ +++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4789999999999977  99999999999999999999 9999996

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=73.45  Aligned_cols=43  Identities=33%  Similarity=0.509  Sum_probs=40.5

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|+++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CCSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            3788999999999977  999999999999999999999999997

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.6e-11  Score=74.21  Aligned_cols=45  Identities=27%  Similarity=0.396  Sum_probs=41.5

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCV--ECGKGYKRRLDLDFHQR--------------VHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECS--SSCCEESSHHHHHHHHH--------------HHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECc--ccCchhCCHHHHHHHHH--------------HHcCCCCCCCCCC
Confidence            378899999999999  99999999999999986              7888999999988

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.9e-10  Score=72.76  Aligned_cols=43  Identities=28%  Similarity=0.494  Sum_probs=40.3

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3778999999999977  999999999999999999999999996

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.6e-10  Score=71.59  Aligned_cols=41  Identities=32%  Similarity=0.499  Sum_probs=38.9

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceec
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVC  168 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C  168 (339)
                      |+++|+++++|.|.+  |++.|.....|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            778999999999977  99999999999999999999999988

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.7e-10  Score=71.49  Aligned_cols=41  Identities=32%  Similarity=0.526  Sum_probs=38.8

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceec
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVC  168 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C  168 (339)
                      |+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            778999999999977  99999999999999999999999987

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.4e-10  Score=73.42  Aligned_cols=43  Identities=30%  Similarity=0.518  Sum_probs=40.8

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999977  999999999999999999999999996

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.7e-10  Score=73.09  Aligned_cols=45  Identities=29%  Similarity=0.358  Sum_probs=41.2

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCK--ECGKAFRQNIHLASHLR--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECS--SSCCEESSHHHHHHHHH--------------HHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECC--cCCchhCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            478899999999999  99999999999999986              7788999999875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=72.83  Aligned_cols=46  Identities=26%  Similarity=0.304  Sum_probs=41.0

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      .|+++|.++++|.|+  .|++.|.....|..|++.             +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~-------------~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECI--ECGKAFIQNTSLIRHWRY-------------YHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCS--SSCCCBSSHHHHHHHHTT-------------TTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECC--ccCchhCChHHHHHHhHh-------------hcCCCCCCCCCCC
Confidence            478999999999999  999999999999999851             5667899999988

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.95  E-value=4.6e-10  Score=71.74  Aligned_cols=44  Identities=27%  Similarity=0.565  Sum_probs=40.5

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCC
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGK  175 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~  175 (339)
                      ..|.++++|.|.+  |++.|.....|.+|+++|+++++|.|+  +|++
T Consensus         5 ~~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSG--PSSG   48 (48)
T ss_dssp             SCCCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSC--CCCC
T ss_pred             CCCCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCC--CCCC
Confidence            3467789999977  999999999999999999999999999  9986

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.7e-10  Score=70.25  Aligned_cols=42  Identities=26%  Similarity=0.244  Sum_probs=39.8

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceec
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVC  168 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C  168 (339)
                      .|+++|+++++|.|.+  |++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCC
Confidence            5889999999999977  99999999999999999999999987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3e-10  Score=71.12  Aligned_cols=43  Identities=26%  Similarity=0.372  Sum_probs=39.9

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      .|+++|.++++|.|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         2 ~h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            3778999999999977  999999999999999999999999984

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=4.6e-10  Score=70.60  Aligned_cols=43  Identities=19%  Similarity=0.339  Sum_probs=40.3

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccC
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCG  174 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~  174 (339)
                      ..|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  .||
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~--~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGP--SSG   45 (45)
T ss_dssp             CCCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCC--CCC
T ss_pred             CCcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCc--CCC
Confidence            4688999999977  999999999999999999999999999  886

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.5e-10  Score=71.22  Aligned_cols=46  Identities=24%  Similarity=0.372  Sum_probs=41.5

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      |.++|+++++|.|.++.|++.|.....|..|+++|+++++|.|.  .|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS--SG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC--CC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence            56889999999997224999999999999999999999999998  77

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.1e-10  Score=72.63  Aligned_cols=44  Identities=25%  Similarity=0.297  Sum_probs=40.9

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCcccc
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFC  173 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C  173 (339)
                      .+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+  +|
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPS--SG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCC--CC
T ss_pred             CCCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence            357899999999977  999999999999999999999999998  77

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.3e-10  Score=69.67  Aligned_cols=42  Identities=29%  Similarity=0.426  Sum_probs=39.2

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      +.++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            457899999999977  999999999999999999999999996

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.5e-10  Score=71.50  Aligned_cols=44  Identities=27%  Similarity=0.425  Sum_probs=40.2

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|+++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCN--ECGKAFSQTSKLARHQR--------------VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCC--SSCCCCSSHHHHHHHGG--------------GGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECC--CCCcccCCHHHHHHHHH--------------HcCCCCCCCCCC
Confidence            588999999999999  99999999999999986              677899999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.4e-10  Score=71.55  Aligned_cols=44  Identities=34%  Similarity=0.486  Sum_probs=40.1

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLVRHRG--------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCS--SSCCBCSSHHHHHHHHT--------------TTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECC--CCCcccCCHHHHHHHHH--------------hhCCCCCCCCCC
Confidence            588999999999999  99999999999999986              677899999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.3e-10  Score=71.64  Aligned_cols=44  Identities=32%  Similarity=0.419  Sum_probs=40.1

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|+++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECS--ECGKAFARKSTLIMHQR--------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECS--SSCCEESSHHHHHHHHT--------------TTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECC--cCCcccCCHHHHHHHHH--------------HhCCCCCCCCCC
Confidence            588999999999999  99999999999999986              677889999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.2e-10  Score=71.18  Aligned_cols=44  Identities=34%  Similarity=0.515  Sum_probs=40.2

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCE--ECGKRFTQNSHLHSHQR--------------VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCS--SSCCCBSSHHHHHHHGG--------------GGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCC--CCCcccCCHHHHHHHHH--------------hcCCCCCCCCCC
Confidence            588999999999999  99999999999999986              777899999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.9e-10  Score=71.26  Aligned_cols=44  Identities=30%  Similarity=0.465  Sum_probs=40.2

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICN--ECGKSFIQKSHLNRHRR--------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECS--SSCCEESSHHHHHHHGG--------------GTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECC--CCChhhCChHHHHHHHH--------------hcCCCCCcCCCC
Confidence            588999999999999  99999999999999986              677899999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.90  E-value=2.9e-10  Score=71.92  Aligned_cols=44  Identities=34%  Similarity=0.463  Sum_probs=40.3

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      .|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECA--ECGKSFSISSQLATHQR--------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECS--SSSCEESSHHHHHHHHH--------------HHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECC--CCCcccCCHHHHHHHHH--------------HhCCCCCCCCCC
Confidence            488999999999999  99999999999999986              778899999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.9e-10  Score=71.23  Aligned_cols=44  Identities=30%  Similarity=0.476  Sum_probs=40.3

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECS--DCGKSFIKKSQLHVHQR--------------IHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCS--SSCCCCSSHHHHHHHHG--------------GGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCC--CCCchhCCHHHHHHHHH--------------HhCCCCCCCCCC
Confidence            588999999999999  99999999999999986              677899999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.90  E-value=5.8e-10  Score=73.20  Aligned_cols=51  Identities=22%  Similarity=0.242  Sum_probs=43.9

Q ss_pred             ccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCcee
Q psy13347        115 YPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFV  167 (339)
Q Consensus       115 ~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~  167 (339)
                      ..|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|++++||.
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCCC
Confidence            34566677888999999999999977  9999999999999999999998874

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.1e-10  Score=71.15  Aligned_cols=44  Identities=34%  Similarity=0.433  Sum_probs=40.2

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECS--ECQKAFNTKSNLIVHQR--------------THTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECS--SSCCEESSHHHHHHHHH--------------TSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCC--CCCcccCCHHHHHHHHH--------------HhCCCCCCCCCC
Confidence            478899999999999  99999999999999986              677899999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.89  E-value=5.1e-10  Score=69.22  Aligned_cols=42  Identities=31%  Similarity=0.513  Sum_probs=38.5

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      |+++|+++++|.|+  +|++.|.....|..|++              +|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECS--ECGKAFNRKDQLISHQR--------------THAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECS--SSCCEESSHHHHHHHHG--------------GGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCC--CcChhhCCHHHHHHHHH--------------hcCCCCCCCCC
Confidence            67889999999999  99999999999999986              67789999985

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.7e-10  Score=71.38  Aligned_cols=44  Identities=34%  Similarity=0.496  Sum_probs=40.0

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLARHRG--------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCS--SSCCCCSSHHHHHHHHT--------------TTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECC--CCCcccCChhHHHHHhH--------------hcCCCCCCCCCC
Confidence            488899999999999  99999999999999986              677889999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.8e-10  Score=70.88  Aligned_cols=44  Identities=30%  Similarity=0.386  Sum_probs=40.0

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      ++++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         3 ~~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCD--VCHKSFRYGSSLTVHQR--------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECS--SSCCEESSHHHHHHHHT--------------TTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCc--ccCcccCChHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            35789999999999  99999999999999986              6778899999988

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=6.8e-10  Score=70.21  Aligned_cols=42  Identities=31%  Similarity=0.473  Sum_probs=39.3

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      ++++|+++++|.|.+  |++.|.....|..|+++|++++||.|.
T Consensus         3 ~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            467899999999977  999999999999999999999999996

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.4e-10  Score=71.06  Aligned_cols=44  Identities=30%  Similarity=0.422  Sum_probs=40.1

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCD--VCGKEFSQSSHLQTHQR--------------VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCS--SSCCBCSSHHHHHHHHT--------------TTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECC--CCCcccCCHHHHHHHHH--------------HcCCCCCCCCCC
Confidence            488899999999999  99999999999999986              677899999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.5e-10  Score=71.49  Aligned_cols=44  Identities=32%  Similarity=0.480  Sum_probs=40.3

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCN--ECGKAFRARSSLAIHQA--------------THSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECT--TSCCEESSHHHHHHHHH--------------HHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeecc--ccCChhcCHHHHHHHHH--------------HcCCCCCCCCCC
Confidence            588899999999999  99999999999999986              778899999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.7e-10  Score=71.12  Aligned_cols=46  Identities=41%  Similarity=0.591  Sum_probs=40.7

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      |.++|+++++|.|.++.|++.|.....|..|++              +|+++++|+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR--------------SHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHT--------------TSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHH--------------HhCCCCCCCCCCC
Confidence            567899999999964479999999999999986              6778999999987

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=4.1e-10  Score=71.21  Aligned_cols=44  Identities=30%  Similarity=0.419  Sum_probs=40.3

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      .|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECI--ECGKAFKTKSSLICHRR--------------SHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECS--SSCCEESSHHHHHHHHH--------------HHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCC--CCCCccCCHHHHHHHHH--------------hcCCCCCCCCCC
Confidence            488999999999999  99999999999999986              778899999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.4e-10  Score=70.99  Aligned_cols=44  Identities=30%  Similarity=0.417  Sum_probs=40.0

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCG--ECGKAFAQKANLTQHQR--------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECS--SSCCEESSHHHHHHHHT--------------TTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECC--CCCCccCCHHHHHHHHH--------------HcCCCCCCCCCC
Confidence            588999999999999  99999999999999986              677889999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.3e-10  Score=71.08  Aligned_cols=44  Identities=30%  Similarity=0.407  Sum_probs=40.1

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      .|+++|+++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCN--ECGKAFRAHSNLTTHQV--------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCT--TTTCCCSSHHHHHHHHT--------------TTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECC--cCChhhCCHHHHHHHHH--------------HhCCCCCCCCCC
Confidence            588999999999999  99999999999999986              677889999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.7e-10  Score=70.57  Aligned_cols=43  Identities=30%  Similarity=0.447  Sum_probs=39.4

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      |+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++
T Consensus         3 h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQ--VCGKAFRVSSHLVQHHS--------------VHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCS--SSCCBCSSHHHHHHHTT--------------TTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCC--CCCcccCcHHHHHHHHH--------------hcCCCCCCCCCC
Confidence            78899999999999  99999999999999986              677889999974

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=7.3e-10  Score=75.97  Aligned_cols=56  Identities=18%  Similarity=0.324  Sum_probs=48.8

Q ss_pred             cCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhccc
Q psy13347        130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRF  190 (339)
Q Consensus       130 h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~  190 (339)
                      .-++++|.|.+  |++.|. ...|..|+++ .+++||.|+. .|++.|..+..|..|+++|
T Consensus         5 ~C~~~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~~C~~-~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            5 SSGKRTQPCTY--CTKEFV-FDTIQSHQYQ-CPRLPVACPN-QCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCCCEEECSS--SCCEEE-HHHHHHHHHH-CSSSEEECTT-CCSCCEEETTTHHHHHHTT
T ss_pred             cCCCCCeeccc--cCCccC-HHHHHHHHHH-cCCcCccCCc-ccCcccccHHHHHHHHHhh
Confidence            34578999977  999999 9999999999 8999999952 6999999999999998754

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.8e-10  Score=71.32  Aligned_cols=44  Identities=32%  Similarity=0.442  Sum_probs=40.3

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|.++++|.|.  +|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECK--VCSKAFTQKAHLAQHQK--------------THTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECS--SSCCEESSHHHHHHHHH--------------HHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECC--CCCcccCCHHHHHHHHH--------------HhCCCCCCCCCC
Confidence            588999999999999  99999999999999986              777899999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=8.1e-11  Score=83.16  Aligned_cols=62  Identities=19%  Similarity=0.305  Sum_probs=42.8

Q ss_pred             ccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcc
Q psy13347        121 TLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGR  189 (339)
Q Consensus       121 ~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~  189 (339)
                      ..|..|+++|.+++++.|.+  |++.|. ...|..|+ .|.++++|.|+  .|++.|. ...|..|+++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~--~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCG--NCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECS--SSCCEEE-TTGGGTHHHH
T ss_pred             hHHHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHcCCCceEcc--cCCCcCc-HHHHHHHHHH
Confidence            45667777777777777755  777773 67777777 67777777777  6777666 3666666653

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6e-10  Score=70.41  Aligned_cols=44  Identities=30%  Similarity=0.388  Sum_probs=40.1

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      .|+++|.++++|.|+  .|++.|.....|..|++              +|+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECS--ECGKAFIQKSTLSMHQR--------------IHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECS--SSCCEESSHHHHHHHHG--------------GGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCC--CCCcccCCHHHHHHHHh--------------HhCCCCCCCCCC
Confidence            488999999999999  99999999999999986              677899999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.2e-10  Score=71.10  Aligned_cols=44  Identities=32%  Similarity=0.440  Sum_probs=40.4

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      .|+++|.++++|.|.  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCE--ECGKAFIHDSQLQEHQR--------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECT--TTCCEESSHHHHHHHHH--------------HHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCC--CCCCCcCCHHHHHHHHH--------------hcCCCCCCCCCC
Confidence            488999999999999  99999999999999986              788899999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.5e-10  Score=70.57  Aligned_cols=44  Identities=32%  Similarity=0.486  Sum_probs=40.0

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      .|+++|.++++|.|+  .|++.|.....|..|++              +|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICS--ECGKVFTHKTNLIIHQK--------------IHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCT--TTCCBCSSHHHHHHHHT--------------TTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECC--ccCcccCCHHHHHHHHH--------------HhCCCCCCCCCC
Confidence            488899999999999  99999999999999986              677889999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.88  E-value=3.5e-10  Score=74.32  Aligned_cols=52  Identities=15%  Similarity=0.079  Sum_probs=47.2

Q ss_pred             ccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcC
Q psy13347        144 NKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQ  211 (339)
Q Consensus       144 ~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~  211 (339)
                      ++.|.....|..|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCP--ICYAVIRQSRNLRRHLE--------------LRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECT--TTCCEESSHHHHHHHHH--------------HHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCC--CCCcccCCHHHHHHHHH--------------HhccCCCCC
Confidence            47889999999999999999999999  99999999999999986              677788774

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=9.4e-10  Score=70.26  Aligned_cols=43  Identities=19%  Similarity=0.309  Sum_probs=39.2

Q ss_pred             hhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcccc
Q psy13347        159 WHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHK  217 (339)
Q Consensus       159 ~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k  217 (339)
                      .|.++++|.|.  +|++.|.....|..|++              +|+++++|.|++|+|
T Consensus         6 ~~~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACE--ICGKIFRDVYHLNRHKL--------------SHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEET--TTTEEESSHHHHHHHGG--------------GSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCC--CCCcccCCHHHHHHHHH--------------hcCCCCCccCCCCCC
Confidence            46788999999  99999999999999986              777899999999986

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.1e-10  Score=70.78  Aligned_cols=44  Identities=30%  Similarity=0.351  Sum_probs=40.2

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      .|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCN--ECKKTFTQSSSLTVHQR--------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCT--TTCCBCSSHHHHHHHHH--------------HHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECC--ccCcccCCHHHHHHHHH--------------HcCCCCCCCCCC
Confidence            478899999999999  99999999999999986              778899999974

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6e-10  Score=68.84  Aligned_cols=42  Identities=24%  Similarity=0.388  Sum_probs=38.4

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIR--------------VHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCT--TTTCCBSSHHHHHTTGG--------------GTSCCSCCCC
T ss_pred             CCccccCCCCCeeCC--CccchhCCHHHHHHHHH--------------HhCCCCCCCC
Confidence            478899999999999  99999999999999986              6778899988

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.9e-10  Score=69.64  Aligned_cols=43  Identities=28%  Similarity=0.427  Sum_probs=39.3

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCN--ECGKAFRSKSYLIIHTR--------------THTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCT--TTCCCCSSHHHHHHHHT--------------TTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECC--CCCCccCCHHHHHHHhh--------------hcCCCCCCCCC
Confidence            588999999999999  99999999999999986              67788999985

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.9e-10  Score=70.47  Aligned_cols=43  Identities=35%  Similarity=0.410  Sum_probs=39.8

Q ss_pred             HhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCcc
Q psy13347        157 LRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSEC  215 (339)
Q Consensus       157 ~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C  215 (339)
                      +++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|++|
T Consensus         4 ~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCS--ECGKSFSGSYRLTQHWI--------------THTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCS--SSCCCCSSHHHHHHHHT--------------HHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCC--CCCcccCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            5789999999999  99999999999999986              7788999999988

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.5e-10  Score=69.43  Aligned_cols=43  Identities=28%  Similarity=0.413  Sum_probs=39.4

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECN--ECQKAFNTKSNLMVHQR--------------THTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECT--TTCCEESCHHHHHHHHH--------------HTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECC--CCCcccCCHhHHHHHHH--------------HhCCCCCCCCC
Confidence            588999999999999  99999999999999986              67788999985

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.5e-10  Score=68.39  Aligned_cols=42  Identities=17%  Similarity=0.342  Sum_probs=38.2

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      |+++|.++++|.|+  .|++.|.....|..|++              +|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCA--ECKETFSDNNRLVQHQK--------------MHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCT--TTCCBCSSHHHHHHHHH--------------HTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECC--CCCCccCCHHHHHHHHH--------------HhCCCCCCCCC
Confidence            67889999999999  99999999999999986              67788999984

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5.3e-10  Score=70.71  Aligned_cols=43  Identities=33%  Similarity=0.544  Sum_probs=39.8

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      +|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCS--DCGKAFTRKSGLHIHQQ--------------SHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECS--SSCCEESSHHHHHHHHH--------------HHTCCCBTTTB
T ss_pred             CcccccCCCCCEECc--ccCCccCCHhHHHHHHH--------------HcCCCCCCCCC
Confidence            588999999999999  99999999999999986              77889999997

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.2e-10  Score=69.79  Aligned_cols=43  Identities=21%  Similarity=0.339  Sum_probs=39.5

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECK--ECRKTFIQIGHLNQHKR--------------VHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCS--SSCCCCSSHHHHHHHHH--------------HCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCC--CcCchhCCHHHHHHHHH--------------HhCCCCCCCCC
Confidence            378899999999999  99999999999999986              77889999996

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=4.6e-10  Score=70.99  Aligned_cols=44  Identities=30%  Similarity=0.416  Sum_probs=40.2

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|+++++|.|+  +|++.|.....|..|++              +|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCN--VCGKAFVLSAHLNQHLR--------------VHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEET--TTTEEESSHHHHHHHHH--------------HHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECc--ccChhhCCHHHHHHHHH--------------HhCCCCCCCCCC
Confidence            588999999999999  99999999999999986              777899999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=6.8e-10  Score=69.41  Aligned_cols=43  Identities=26%  Similarity=0.407  Sum_probs=39.4

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCS--KCDRVFTQRNYLVQHER--------------THARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECS--SSSCEESSSHHHHHHHH--------------HCCCCCSSCCC
T ss_pred             CCccccCCCCCeECC--CCCchhCCHHHHHHHhH--------------hcCCCCCCCCC
Confidence            588999999999999  99999999999999986              77788999984

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=8.4e-10  Score=68.98  Aligned_cols=43  Identities=12%  Similarity=0.155  Sum_probs=39.4

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      .|+++|.++++|.|+  .|++.|.....|..|++              +|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECS--KCQATFNLRKHLIQHQK--------------THAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECT--TTCCEESCHHHHHHHGG--------------GGCCCCCTTCC
T ss_pred             CcccccCCCCCeECC--CCCCccCCHHHHHHHHH--------------HcCCCCCcCCC
Confidence            588999999999999  99999999999999986              67789999985

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6.7e-10  Score=69.42  Aligned_cols=43  Identities=30%  Similarity=0.471  Sum_probs=39.3

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECC--ECGKVFSRKDQLVSHQK--------------THSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEET--TTTEECSSHHHHHHHHT--------------TSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCC--CCCCccCCHHHHHHHHH--------------HcCCCCCCCCC
Confidence            488999999999999  99999999999999986              67788999985

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.6e-09  Score=66.50  Aligned_cols=39  Identities=28%  Similarity=0.486  Sum_probs=36.7

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceec
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVC  168 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C  168 (339)
                      ++|+++++|.|.+  |++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            5788999999977  99999999999999999999999988

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.84  E-value=1.4e-09  Score=67.68  Aligned_cols=40  Identities=10%  Similarity=0.272  Sum_probs=37.6

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      ++|+++++|.|.+  |++.|.....|..|+++|+++++|.|+
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            5788999999977  999999999999999999999999996

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=9.5e-10  Score=69.49  Aligned_cols=44  Identities=25%  Similarity=0.226  Sum_probs=39.9

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecC-CCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCR-EKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~-~k~~~C~~  214 (339)
                      .|+++|.++++|.|+  .|++.|.....|..|++              +|++ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCN--KCEKTFSCSKYLTQHER--------------IHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECS--SSCCEESSSHHHHHHHT--------------TCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECc--CCCCcCCCHHHHHHHHH--------------HcCCCCCCCCCCC
Confidence            478899999999999  99999999999999986              6778 89999974

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=6e-10  Score=70.45  Aligned_cols=44  Identities=36%  Similarity=0.468  Sum_probs=40.2

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCN--ECGKGFGRRSHLAGHLR--------------LHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCS--SSCCCCSSHHHHHHHHH--------------HHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECC--CCCcccCCHHHHHHHHH--------------HhCCCCCCCCCC
Confidence            478999999999999  99999999999999986              788899999973

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.2e-09  Score=69.07  Aligned_cols=43  Identities=28%  Similarity=0.401  Sum_probs=39.2

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      |+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|+.
T Consensus         3 h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECD--VCRKAFSHHASLTQHQR--------------VHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCT--TTCCBCSSSHHHHHHGG--------------GSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCC--CcCchhCCHHHHHHHHH--------------HhCCCCCCCCCC
Confidence            67899999999999  99999999999999986              677899999973

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.1e-09  Score=67.63  Aligned_cols=41  Identities=22%  Similarity=0.394  Sum_probs=37.6

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      |+++|.++++|.|+  +|++.|.....|..|++              +|++++||+|
T Consensus         2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCE--ICGTRFRHLQTLKSHLR--------------IHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCS--SSCCCBSSHHHHHHHTT--------------TTSCCSSTTC
T ss_pred             CCcccCCCCCEECC--CCCCccCCHHHHHHHHH--------------hcCCCCCCCC
Confidence            67899999999999  99999999999999986              6778899988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=7.9e-10  Score=69.79  Aligned_cols=44  Identities=27%  Similarity=0.423  Sum_probs=40.0

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +|+++|.++++|.|+  .|++.|.....|..|++              +|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECN--QCGKAFSVRSSLTTHQA--------------IHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEET--TTTEECSSHHHHHHHHT--------------TSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECC--CCChhhCCHHHHHHHHH--------------HhCCCCCCCCCC
Confidence            588999999999999  99999999999999986              677889999973

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=1.1e-09  Score=68.76  Aligned_cols=43  Identities=23%  Similarity=0.451  Sum_probs=39.4

Q ss_pred             hhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccc
Q psy13347        158 RWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECH  216 (339)
Q Consensus       158 ~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~  216 (339)
                      ..|+++++|.|+  .|++.|.....|..|++              +|+++++|.|++||
T Consensus         3 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~--------------~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCP--VCGLRFKRKDRMSYHVR--------------SHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEET--TTTEECSCHHHHHHHHH--------------HHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCC--CCCcccCCHHHHHHHHH--------------HccCCCCCCCcCCC
Confidence            368899999999  99999999999999986              77889999999996

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=9.8e-10  Score=67.89  Aligned_cols=41  Identities=22%  Similarity=0.367  Sum_probs=38.0

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      |+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|
T Consensus         2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCE--TCGARFVQVAHLRAHVL--------------IHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECT--TTCCEESSHHHHHHHTH--------------HHHSCCSSCC
T ss_pred             CCcccCCCCCEeCC--CcChhhCCHHHHHHHHH--------------HcCCCCCCCC
Confidence            77899999999999  99999999999999985              7888999988

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=7.9e-10  Score=69.83  Aligned_cols=43  Identities=30%  Similarity=0.339  Sum_probs=39.7

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      +|+++|+++++|.|+  +|++.|.....|..|++              +|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCK--ECGMNFSWSCSLFKHLR--------------SHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECS--SSCCEESSSHHHHHHHH--------------HHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCc--ccChhhCCHHHHHHHHH--------------HhCCCCCCCCC
Confidence            588999999999999  99999999999999986              77889999996

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.78  E-value=1.4e-09  Score=67.09  Aligned_cols=41  Identities=27%  Similarity=0.478  Sum_probs=37.7

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      |+++|.++++|.|+  .|++.|.....|..|++              +|++++||.|
T Consensus         2 H~~~H~~~~~~~C~--~C~k~f~~~~~l~~H~~--------------~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCG--QCGKSFTQRGSLAVHQR--------------SCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECS--SSCCEESSHHHHHHHHH--------------HTTCCCCCCC
T ss_pred             CCccCCCCCCeECC--CCCcccCCHHHHHHHhh--------------hcCCCCCCCC
Confidence            67889999999999  99999999999999986              6778899988

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.78  E-value=3e-09  Score=63.65  Aligned_cols=36  Identities=39%  Similarity=0.584  Sum_probs=32.6

Q ss_pred             ccceecCCCCcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        200 LPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       200 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      |+++|++++||.|++|++.|.++..|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            445888999999999999999999999999999874

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2e-09  Score=67.30  Aligned_cols=42  Identities=19%  Similarity=0.158  Sum_probs=38.6

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      |+++|.++++|.|+  +|++.|.....|..|++              +|+++++|.|+
T Consensus         3 h~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQ--ECGKIFRHSSLLIEHQA--------------LHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCT--TTCCCCSSHHHHHHHHH--------------HHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECC--CCCcccCCHHHHHHHHH--------------HHCCCCCCCCC
Confidence            67889999999999  99999999999999986              77889999985

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.76  E-value=3.5e-09  Score=71.92  Aligned_cols=41  Identities=17%  Similarity=0.284  Sum_probs=37.3

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHH-hhhCCCCceecC
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHL-RWHTGERPFVCT  169 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~  169 (339)
                      .++++|||+|.+++|++.|.+.++|.+|+ ++|++++||.|.
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            46889999997767999999999999998 689999999996

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.2e-09  Score=68.33  Aligned_cols=43  Identities=23%  Similarity=0.301  Sum_probs=39.2

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      .|+++|.++++|.|+  +|++.|.....|..|++              +|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCN--ECGKAFTRIFHLTRHQK--------------IHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEET--TTTEEESSSHHHHTTHH--------------HHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECc--ccCcccCCHHHHHHHHH--------------HhCCCCCCCCC
Confidence            588999999999999  99999999999999986              77788999983

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.4e-09  Score=75.44  Aligned_cols=65  Identities=9%  Similarity=-0.075  Sum_probs=54.5

Q ss_pred             hhcccccccccCccccccccccccccccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347         95 LKIYKTTAEVNNKIRLSSYFYPALISTLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus        95 ~~~~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      +..+....-..+.+.|..|...|. ...|..|+ .|.++++|.|..  |++.|. ...|..|+++|.+++
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~--C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGN--CGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSS--SCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEccc--CCCcCc-HHHHHHHHHHccCCc
Confidence            345555567778899999999994 88899999 899999999976  999987 489999999987753

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.9e-09  Score=66.56  Aligned_cols=42  Identities=26%  Similarity=0.382  Sum_probs=38.4

Q ss_pred             HHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        155 AHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       155 ~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      .|+++|+++++|.|.  +|++.|.....|..|++              +|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECN--ECGKAFIWKSLLIVHER--------------THAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECS--SSCCEESSHHHHHHHHG--------------GGSSCSCCCC
T ss_pred             CCCcccCCCcCeECC--CCCcccCchHHHHHHHh--------------HhcCCCCCCC
Confidence            488999999999999  99999999999999986              6778899987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=2.9e-09  Score=67.22  Aligned_cols=43  Identities=26%  Similarity=0.265  Sum_probs=38.6

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      ++++|.++++|.|+  +|++.|.....|..|++              +|++++||.|++
T Consensus         3 ~~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCS--DCGKFFLQASNFIQHRR--------------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCS--SSCCCCSSHHHHHHHHH--------------HHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCC--CCCCeeCChHHHHHHHH--------------HhCCCCCCCCCC
Confidence            35789999999999  99999999999999986              778899999974

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=4.7e-09  Score=62.73  Aligned_cols=35  Identities=23%  Similarity=0.486  Sum_probs=32.3

Q ss_pred             ceecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        202 MTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       202 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ++|+++++|.|++|++.|.++..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            37889999999999999999999999999999864

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.72  E-value=1.2e-09  Score=79.50  Aligned_cols=59  Identities=17%  Similarity=0.131  Sum_probs=48.0

Q ss_pred             cccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhccc
Q psy13347        124 SCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRF  190 (339)
Q Consensus       124 ~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~  190 (339)
                      ..|.++|+++++|.|.+  |++.|.....|..|+++|++++||.|.  .|.    ....|..|.+.|
T Consensus        14 ~~~~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~--~~~----~~~~~~~~~~~~   72 (88)
T 1x6f_A           14 ILGNGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRAK--RQE----RRKQLLSKQKYA   72 (88)
T ss_dssp             CCCCCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHCC--CCS----CCCCCCCCCCCC
T ss_pred             eccccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCcccc--hhh----hHHHHHhhhccc
Confidence            44557799999999977  999999999999999999999999997  554    445555665533

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3.5e-09  Score=66.45  Aligned_cols=43  Identities=33%  Similarity=0.470  Sum_probs=38.3

Q ss_pred             HHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        156 HLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       156 H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      +.++|.++++|.|.  +|++.|.....|..|++              +|+++++|.|++
T Consensus         3 ~~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~--------------~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECT--HCGKSFRAKGNLVTHQR--------------IHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEET--TTTEEESSHHHHHHHHT--------------TTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccCC--CCCCccCChHHHHHHHH--------------HhCCCCCCCCCC
Confidence            45679999999999  99999999999999986              677889999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.68  E-value=7.9e-09  Score=64.17  Aligned_cols=41  Identities=22%  Similarity=0.307  Sum_probs=37.2

Q ss_pred             hhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        158 RWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       158 ~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      ++|+++++|.|.  .|++.|.....|..|++              +|+++++|.|++
T Consensus         3 ~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCN--ECDCRFSEEASLKRHTL--------------QTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCS--SSCCCBSSHHHHHHHHH--------------HHTCTTCSSSCC
T ss_pred             cCcCCCCCEECC--CCCCeeCChHHHHHHHH--------------hhCCCCCccCCC
Confidence            468899999999  99999999999999986              778899999974

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=8.6e-09  Score=62.23  Aligned_cols=33  Identities=21%  Similarity=0.351  Sum_probs=30.2

Q ss_pred             eecCCCCcCCCc--cccccCChhHHHHHHHhhcCC
Q psy13347        203 TWCREKRFQCSE--CHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       203 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      .+++++||+|++  |++.|.+++.|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            456899999986  999999999999999999985

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.3e-08  Score=62.29  Aligned_cols=39  Identities=21%  Similarity=0.384  Sum_probs=35.6

Q ss_pred             hhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCC
Q psy13347        158 RWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQC  212 (339)
Q Consensus       158 ~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C  212 (339)
                      ++|.++++|.|+  .|++.|.....|..|++              +|++++||.|
T Consensus         3 ~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~--------------~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQ--ECGKSFRQKGSLTLHER--------------IHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECS--SSCCEESSHHHHHHHGG--------------GCCCCSCSCC
T ss_pred             CccCCCCCeECC--CCCCCcCCHHHHHHHHH--------------HhCCCCCcCC
Confidence            468999999999  99999999999999986              7778899988

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.65  E-value=1.1e-08  Score=60.22  Aligned_cols=33  Identities=27%  Similarity=0.474  Sum_probs=30.5

Q ss_pred             ecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        204 WCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       204 h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      |+++++|.|++|++.|.++..|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            568899999999999999999999999998764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.64  E-value=1.1e-08  Score=60.16  Aligned_cols=33  Identities=24%  Similarity=0.513  Sum_probs=30.5

Q ss_pred             ecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        204 WCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       204 h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      |+++++|.|++|++.|.+...|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            668899999999999999999999999998764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.3e-08  Score=60.71  Aligned_cols=34  Identities=26%  Similarity=0.565  Sum_probs=31.5

Q ss_pred             eecCCCCcCCCccccccCCh-hHHHHHHHhhcCCC
Q psy13347        203 TWCREKRFQCSECHKKFMRS-DHLQKHIKTHSKTR  236 (339)
Q Consensus       203 ~h~~~k~~~C~~C~k~F~~~-~~L~~H~~~h~~~~  236 (339)
                      +|+++++|.|++|++.|.++ ..|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            67889999999999999999 99999999998764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.60  E-value=2e-08  Score=60.83  Aligned_cols=37  Identities=16%  Similarity=0.363  Sum_probs=33.1

Q ss_pred             cCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceec
Q psy13347        130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVC  168 (339)
Q Consensus       130 h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C  168 (339)
                      |+++++|.|.+  |++.|.....|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCcccee
Confidence            56789999977  99999999999999999999999876

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.7e-08  Score=59.73  Aligned_cols=34  Identities=18%  Similarity=0.458  Sum_probs=31.5

Q ss_pred             eecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       203 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      .|+++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            6778999999999999999999999999998864

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.8e-08  Score=58.82  Aligned_cols=34  Identities=26%  Similarity=0.412  Sum_probs=31.4

Q ss_pred             eecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       203 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      .|.++++|.|++|++.|.++..|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5778999999999999999999999999999864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=1.8e-08  Score=59.77  Aligned_cols=34  Identities=26%  Similarity=0.496  Sum_probs=31.4

Q ss_pred             eecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       203 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      .|+++++|+|++|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            5778999999999999999999999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=1.6e-08  Score=59.98  Aligned_cols=34  Identities=18%  Similarity=0.397  Sum_probs=31.3

Q ss_pred             eecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       203 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      .|+++++|.|.+|++.|.++..|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5778999999999999999999999999998764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=2.7e-08  Score=59.32  Aligned_cols=37  Identities=14%  Similarity=0.388  Sum_probs=32.8

Q ss_pred             ccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCc
Q psy13347        127 LRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERP  165 (339)
Q Consensus       127 ~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~  165 (339)
                      +++|+++++|.|.+  |++.|.....|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            36788999999977  99999999999999999998875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=1.3e-08  Score=60.97  Aligned_cols=34  Identities=26%  Similarity=0.555  Sum_probs=31.2

Q ss_pred             ceecCCCCcCCCccccccCChhHHHHH-HHhhcCC
Q psy13347        202 MTWCREKRFQCSECHKKFMRSDHLQKH-IKTHSKT  235 (339)
Q Consensus       202 ~~h~~~k~~~C~~C~k~F~~~~~L~~H-~~~h~~~  235 (339)
                      ++|++++||+|+.|++.|.++..|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            378899999999999999999999999 8999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=2.7e-08  Score=59.71  Aligned_cols=37  Identities=24%  Similarity=0.489  Sum_probs=32.6

Q ss_pred             cCCCCeEEeeccccccccCCchhHHHHHhhhCCCCce
Q psy13347        130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPF  166 (339)
Q Consensus       130 h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~  166 (339)
                      |+++++|.|.++.|++.|.....|.+|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5678999997446999999999999999999999887

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=4.5e-08  Score=59.00  Aligned_cols=35  Identities=26%  Similarity=0.445  Sum_probs=28.4

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      .++++++|+|.+++|++.|..++.|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            35678889996445999999999999999998875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=3.3e-08  Score=67.12  Aligned_cols=42  Identities=21%  Similarity=0.226  Sum_probs=36.0

Q ss_pred             hCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        160 HTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       160 H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      ++++|||+|.++.|++.|...+.|.+|++             ++|+++|||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~r-------------riHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQ-------------AVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHH-------------HHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhh-------------hhCCCCCCccccc
Confidence            57899999985569999999999999973             2788999999864

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=3.4e-08  Score=71.77  Aligned_cols=55  Identities=15%  Similarity=0.291  Sum_probs=47.2

Q ss_pred             cceecCCCCcCCCccccccCChhHHHHHHHhhcCCC---CCccccccCCccccccccccccC
Q psy13347        201 PMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNFSDNTVVTEDSKLELS  259 (339)
Q Consensus       201 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~---C~~C~~~f~~~~~l~~H~~~~~~  259 (339)
                      .++|+++++|.|++|++.|.+...|..|+++|++++   |..    |..+..|..|.+.|..
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~----~~~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKR----QERRKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCC----CSCCCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccch----hhhHHHHHhhhccccc
Confidence            457899999999999999999999999999999887   755    4567788888888753

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.55  E-value=4.1e-08  Score=62.19  Aligned_cols=42  Identities=21%  Similarity=0.412  Sum_probs=34.8

Q ss_pred             ccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        123 FSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       123 l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      +..|+..|+++++|.|.++.|++.|...+.|..|+++|++++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            344556799999999964459999999999999999998864

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.54  E-value=3.3e-08  Score=59.81  Aligned_cols=33  Identities=24%  Similarity=0.601  Sum_probs=30.1

Q ss_pred             ecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        204 WCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       204 h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      |+++++|.|++|++.|.+...|..|+++|++++
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   33 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDR   33 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCc
Confidence            457899999999999999999999999999876

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.53  E-value=4e-08  Score=58.55  Aligned_cols=36  Identities=25%  Similarity=0.430  Sum_probs=27.1

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      |+++|+++++|.|.+  |++.|.....|..|+++|.++
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhccC
Confidence            567777777888855  888888888888887777653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.50  E-value=3.2e-08  Score=63.05  Aligned_cols=34  Identities=24%  Similarity=0.445  Sum_probs=29.5

Q ss_pred             eecCCCCcCCCccccccCChhHHHHHHH-hhcCCC
Q psy13347        203 TWCREKRFQCSECHKKFMRSDHLQKHIK-THSKTR  236 (339)
Q Consensus       203 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~h~~~~  236 (339)
                      +|+++++|.|.+|++.|.++..|..|++ +|+++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            4678999999999999999999999999 998764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=4.4e-08  Score=57.98  Aligned_cols=34  Identities=29%  Similarity=0.573  Sum_probs=30.7

Q ss_pred             eecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       203 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      .|.++++|.|++|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4567899999999999999999999999998864

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=1.1e-07  Score=64.82  Aligned_cols=34  Identities=24%  Similarity=0.416  Sum_probs=31.4

Q ss_pred             eecCCCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       203 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      .+.++|||+|.+|+|.|.++..|..|+++|++..
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            5667899999999999999999999999999865

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.48  E-value=1.1e-07  Score=55.84  Aligned_cols=35  Identities=23%  Similarity=0.496  Sum_probs=29.6

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCc
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERP  165 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~  165 (339)
                      +|+++++|.|.+  |++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            367888999977  99999999999999999988764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.48  E-value=9.8e-08  Score=55.90  Aligned_cols=35  Identities=23%  Similarity=0.434  Sum_probs=29.8

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCc
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERP  165 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~  165 (339)
                      +|+++++|.|.+  |++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCCC
Confidence            367788999977  99999999999999999988764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.46  E-value=5.9e-08  Score=57.96  Aligned_cols=34  Identities=26%  Similarity=0.552  Sum_probs=30.7

Q ss_pred             eecCCCCcCCCc--cccccCChhHHHHHHHhhcCCC
Q psy13347        203 TWCREKRFQCSE--CHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       203 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      .|+++++|.|.+  |++.|.++..|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            467899999995  9999999999999999999864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.45  E-value=1.3e-07  Score=64.14  Aligned_cols=54  Identities=19%  Similarity=0.360  Sum_probs=48.7

Q ss_pred             EEeeccccccccCCchhHHHHHh-hhCCCC------ceecCccccCCccCChHHHHhhhcc
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLR-WHTGER------PFVCTWQFCGKRFTRSDELQVNGGR  189 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~-~H~~~k------~~~C~~~~C~~~f~~~~~L~~H~~~  189 (339)
                      |.|.|.+|++.|.+...|..|+. .|.+.+      +|.|.|+.|++.+.....|..|++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            57899999999999999999985 787765      8999999999999999999999864

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.44  E-value=6.9e-08  Score=61.10  Aligned_cols=35  Identities=34%  Similarity=0.665  Sum_probs=32.0

Q ss_pred             ceecCCCCcCCC--ccccccCChhHHHHHHHhhcCCC
Q psy13347        202 MTWCREKRFQCS--ECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       202 ~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ..|+++++|.|+  .|++.|.++..|..|+++|++++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            479999999996  69999999999999999999864

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.41  E-value=1.5e-07  Score=54.58  Aligned_cols=29  Identities=55%  Similarity=0.989  Sum_probs=27.2

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      +||.|++|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~   29 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLG   29 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            57999999999999999999999999875

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.39  E-value=1.7e-07  Score=55.89  Aligned_cols=36  Identities=81%  Similarity=1.461  Sum_probs=29.8

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      .|+++++|.|.++.|++.|...+.|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367889999964459999999999999999998764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.37  E-value=1.5e-07  Score=54.64  Aligned_cols=33  Identities=21%  Similarity=0.279  Sum_probs=29.5

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCCceec
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVC  168 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C  168 (339)
                      ++|.|.+  |++.|.....|..|+++|+++++|.+
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPE--CPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSS--SCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCC--CCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4789977  99999999999999999999999853

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.36  E-value=2.5e-07  Score=51.45  Aligned_cols=29  Identities=31%  Similarity=0.917  Sum_probs=26.7

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ++|.|++|++.|.+...|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999999998763

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=1.8e-07  Score=52.42  Aligned_cols=30  Identities=27%  Similarity=0.636  Sum_probs=27.5

Q ss_pred             CCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      +++|.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.9e-07  Score=54.32  Aligned_cols=35  Identities=17%  Similarity=0.364  Sum_probs=28.5

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      +.|+++++|.|.+  |++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHI--CERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSS--SCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCC--CCCccCCHHHHHHHHHHhcCCC
Confidence            3577788899976  9999998888999988887754

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.34  E-value=1.8e-07  Score=52.11  Aligned_cols=29  Identities=52%  Similarity=0.992  Sum_probs=26.7

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57999999999999999999999998764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.34  E-value=1.7e-07  Score=56.09  Aligned_cols=33  Identities=33%  Similarity=0.658  Sum_probs=29.7

Q ss_pred             ecCCCCcCCC--ccccccCChhHHHHHHHhhcCCC
Q psy13347        204 WCREKRFQCS--ECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       204 h~~~k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      |+++++|.|.  .|++.|.+...|..|+++|++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            4578999999  59999999999999999998864

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=2.8e-07  Score=54.77  Aligned_cols=35  Identities=23%  Similarity=0.469  Sum_probs=30.1

Q ss_pred             cccCCCCeEEeeccccccccCCc-hhHHHHHhhhCCCC
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKT-SHLRAHLRWHTGER  164 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~-~~L~~H~~~H~~~k  164 (339)
                      ++|+++++|.|.+  |++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCCC
Confidence            4688889999977  99999998 99999999998764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=3.5e-07  Score=53.95  Aligned_cols=35  Identities=26%  Similarity=0.522  Sum_probs=29.0

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      +.|+++++|+|.+  |++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCC--CCchhCCHHHHHHHHHHhccCC
Confidence            3577888999976  9999999999999998888764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=3.2e-07  Score=54.65  Aligned_cols=35  Identities=14%  Similarity=0.255  Sum_probs=29.0

Q ss_pred             ccccCCCCeEEeeccccccccCCchhHHHH-HhhhCCC
Q psy13347        127 LRTADRKKVHICHIEGCNKVYGKTSHLRAH-LRWHTGE  163 (339)
Q Consensus       127 ~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H-~~~H~~~  163 (339)
                      +++|+++++|+|..  |++.|.....|..| ++.|+++
T Consensus         1 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCC--CCcccCCHHHHHHHHHHHccCc
Confidence            35688889999966  99999999999999 8888764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.31  E-value=1.9e-07  Score=51.61  Aligned_cols=28  Identities=25%  Similarity=0.679  Sum_probs=25.8

Q ss_pred             CCCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      +++|.|++|++.|.+...|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999999874

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.31  E-value=2.1e-07  Score=51.07  Aligned_cols=27  Identities=37%  Similarity=0.705  Sum_probs=25.1

Q ss_pred             CCCcCCCccccccCChhHHHHHHHhhc
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      ++||.|+.|++.|.+...|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999999985

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=4.1e-07  Score=53.54  Aligned_cols=34  Identities=32%  Similarity=0.521  Sum_probs=29.2

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      +|.++++|.|.+  |++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCCC
Confidence            577888999977  9999999999999999998764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.31  E-value=3.8e-07  Score=52.15  Aligned_cols=30  Identities=30%  Similarity=0.789  Sum_probs=27.4

Q ss_pred             CCCcCCC--ccccccCChhHHHHHHHhhcCCC
Q psy13347        207 EKRFQCS--ECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       207 ~k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ++||.|+  .|++.|.+...|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999999864

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.31  E-value=3.3e-07  Score=50.83  Aligned_cols=29  Identities=34%  Similarity=0.707  Sum_probs=26.7

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            57999999999999999999999998763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.30  E-value=1.6e-07  Score=51.62  Aligned_cols=27  Identities=22%  Similarity=0.524  Sum_probs=25.0

Q ss_pred             CCCcCCCccccccCChhHHHHHHHhhc
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      ++||.|+.|++.|..+..|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            478999999999999999999999884

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.28  E-value=4.1e-07  Score=51.63  Aligned_cols=29  Identities=45%  Similarity=0.919  Sum_probs=26.6

Q ss_pred             CCcCCC--ccccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCS--ECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~--~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      +||.|+  .|++.|.+...|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            579998  89999999999999999999864

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.59  E-value=1.1e-07  Score=53.10  Aligned_cols=29  Identities=31%  Similarity=0.660  Sum_probs=26.4

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      +||.|++|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            57999999999999999999999998763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.26  E-value=3.2e-07  Score=50.95  Aligned_cols=29  Identities=34%  Similarity=0.801  Sum_probs=26.7

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ++|.|.+|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            57999999999999999999999998864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.57  E-value=1.3e-07  Score=53.20  Aligned_cols=30  Identities=27%  Similarity=0.736  Sum_probs=27.1

Q ss_pred             CCCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      ++||.|+.|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            368999999999999999999999998753

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.24  E-value=7e-07  Score=49.88  Aligned_cols=28  Identities=36%  Similarity=0.632  Sum_probs=26.1

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      ++|.|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccC
Confidence            4799999999999999999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=7.8e-07  Score=52.37  Aligned_cols=34  Identities=41%  Similarity=0.748  Sum_probs=28.6

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      .|.++++|.|.+  |++.|.....|..|+++|.+++
T Consensus         3 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTT--TCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCC--CCceeCCHHHHHHHHHHhCCCC
Confidence            366788999976  9999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.22  E-value=5.7e-07  Score=53.32  Aligned_cols=28  Identities=25%  Similarity=0.476  Sum_probs=25.3

Q ss_pred             ecCCCCcCCCccccccCChhHHHHHHHh
Q psy13347        204 WCREKRFQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       204 h~~~k~~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      +.++|||.|+.|+|.|.++++|.+|+..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py   30 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCe
Confidence            4579999999999999999999999943

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.22  E-value=5.2e-07  Score=49.27  Aligned_cols=27  Identities=22%  Similarity=0.690  Sum_probs=23.9

Q ss_pred             CcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      ||.|.+|++.|.++..|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999999863

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=6.2e-07  Score=52.72  Aligned_cols=34  Identities=26%  Similarity=0.636  Sum_probs=28.1

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      .|.++++|.|.+  |++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcCCC
Confidence            467788899966  9999999999999998888764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.19  E-value=7.3e-07  Score=56.55  Aligned_cols=35  Identities=34%  Similarity=0.524  Sum_probs=25.6

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHh-hhCCCCc
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLR-WHTGERP  165 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~~k~  165 (339)
                      +|+++++|.|.+  |++.|.....|..|++ +|.++..
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCCC
Confidence            367788888866  8888888888888888 7877643

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.47  E-value=2.3e-07  Score=50.36  Aligned_cols=26  Identities=38%  Similarity=0.916  Sum_probs=23.9

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhc
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      +||.|++|++.|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            57999999999999999999999884

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.15  E-value=8.3e-07  Score=49.71  Aligned_cols=29  Identities=38%  Similarity=0.715  Sum_probs=26.0

Q ss_pred             CCcCCCccccccCChhHHHHH-HHhhcCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKH-IKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H-~~~h~~~~  236 (339)
                      +||.|+.|++.|.+...|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            479999999999999999999 68998763

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.14  E-value=8.4e-08  Score=55.26  Aligned_cols=29  Identities=52%  Similarity=0.802  Sum_probs=25.5

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      +||.|++|++.|.++..|..|+++|++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            57999999999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.04  E-value=1.4e-06  Score=51.66  Aligned_cols=31  Identities=23%  Similarity=0.537  Sum_probs=25.7

Q ss_pred             cCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       130 h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      +.++++|+|..  |+|.|..+++|.+|+       ||.|.
T Consensus         3 ~~gekp~~C~~--CgK~F~~~s~L~~H~-------py~C~   33 (36)
T 1fv5_A            3 LLKPARFMCLP--CGIAFSSPSTLEAHQ-------AYYCS   33 (36)
T ss_dssp             SSSCCCCEETT--TTEECSCHHHHHHHH-------HHTST
T ss_pred             CCCccCeECCC--CCCccCCHhHccCcC-------CeECc
Confidence            45788999966  999999999999998       67775

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.04  E-value=1.6e-07  Score=53.98  Aligned_cols=31  Identities=16%  Similarity=0.284  Sum_probs=24.6

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCCce
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPF  166 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~  166 (339)
                      ++|.|.+  |++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHccCCCC
Confidence            4678866  888888888888888888888776

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=3.4e-06  Score=46.93  Aligned_cols=30  Identities=20%  Similarity=0.455  Sum_probs=23.6

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      +++|.|.+  |++.|.....|..|+++|.+++
T Consensus         1 ~k~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDY--CGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHHHhccCC
Confidence            36788866  8888888888888888887653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.00  E-value=3.3e-06  Score=48.07  Aligned_cols=32  Identities=22%  Similarity=0.475  Sum_probs=25.3

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      +++|.|.++.|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            36788962249999999999999999988764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.00  E-value=3.6e-06  Score=46.53  Aligned_cols=29  Identities=24%  Similarity=0.527  Sum_probs=23.5

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      ++|.|..  |++.|.....|..|+++|.+++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPE--CPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSS--SSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCC--CCchhCCHHHHHHHHHHhcCCC
Confidence            4688866  8888888888888888887653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.96  E-value=3.2e-06  Score=47.74  Aligned_cols=31  Identities=32%  Similarity=0.672  Sum_probs=23.6

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      ++|.|.++.|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            4678862248888888888888888887764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.94  E-value=2.9e-06  Score=46.92  Aligned_cols=27  Identities=26%  Similarity=0.620  Sum_probs=24.8

Q ss_pred             CCcCCC--ccccccCChhHHHHHHHhhcC
Q psy13347        208 KRFQCS--ECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       208 k~~~C~--~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999999974

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.91  E-value=4.5e-06  Score=46.08  Aligned_cols=29  Identities=31%  Similarity=0.892  Sum_probs=22.8

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      ++|.|.+  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCC--CCcccCCHHHHHHHHHHhcCCC
Confidence            3678866  8888888888888888887653

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.89  E-value=5.1e-06  Score=45.79  Aligned_cols=29  Identities=34%  Similarity=0.721  Sum_probs=24.0

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      ++|.|.+  |++.|.....|..|+++|.+++
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCC--CCCccCChhHHHHHHHHhcCCC
Confidence            4688966  9999999999999998887764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.87  E-value=6.6e-06  Score=45.07  Aligned_cols=26  Identities=27%  Similarity=0.632  Sum_probs=18.4

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      ++|.|.+  |++.|.....|..|+++|+
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSV--CGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSS--SCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHhcC
Confidence            5677755  7777777777777777665

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.86  E-value=6.3e-06  Score=44.93  Aligned_cols=25  Identities=24%  Similarity=0.458  Sum_probs=18.5

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhh
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      ++|.|.+  |++.|.....|..|+++|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPL--CRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETT--TTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCC--CCcccCCHHHHHHHHHhc
Confidence            5677755  777777777777777766

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.86  E-value=6.8e-06  Score=45.61  Aligned_cols=30  Identities=20%  Similarity=0.437  Sum_probs=23.9

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCCc
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERP  165 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~  165 (339)
                      ++|.|.+  |++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCC--CCCccCCHHHHHHHHHHHccCCC
Confidence            3678866  88888888888888888877653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.85  E-value=8.1e-06  Score=44.35  Aligned_cols=26  Identities=31%  Similarity=0.498  Sum_probs=18.8

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      ++|.|..  |++.|.....|..|+++|+
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSL--CPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCC--cChhhCCHHHHHHHHHHcc
Confidence            5677755  7777777777777777663

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.85  E-value=6.3e-06  Score=56.02  Aligned_cols=39  Identities=21%  Similarity=0.346  Sum_probs=30.8

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      ..+.++++|+|..  |+|.|.....|.+|+++|+++. +.|.
T Consensus         6 ~~~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~-~~~~   44 (66)
T 2epp_A            6 SGLREAGILPCGL--CGKVFTDANRLRQHEAQHGVTS-LQLG   44 (66)
T ss_dssp             CSCCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTS-CCCC
T ss_pred             CCCCCccCcCCCC--CCCccCCHHHHHhhhhhhCCCc-cccc
Confidence            3466788999966  9999999999999999998764 3454

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.05  E-value=2.3e-06  Score=47.49  Aligned_cols=29  Identities=45%  Similarity=0.789  Sum_probs=22.5

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      ++|.|.+  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVM--CGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            4678866  8888888888888888887653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.00  E-value=2.9e-06  Score=47.34  Aligned_cols=28  Identities=36%  Similarity=0.749  Sum_probs=22.1

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      ++|.|.+  |++.|.....|..|+++|+++
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIH--CQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5688866  888888888888888887765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=6.6e-06  Score=45.26  Aligned_cols=29  Identities=34%  Similarity=0.745  Sum_probs=22.7

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      ++|.|..  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPH--CDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSS--CCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCC--CCcccCCHHHHHHHHHHhccCC
Confidence            4678866  8888888888888888887653

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.77  E-value=1.7e-05  Score=53.55  Aligned_cols=60  Identities=15%  Similarity=0.243  Sum_probs=45.5

Q ss_pred             eecCccccCCccCChHHHHhhhc-ccCcccchhccccceecCCCCcCCC--ccccccCChhHHHHHHHhhc
Q psy13347        166 FVCTWQFCGKRFTRSDELQVNGG-RFGIERTVVRILPMTWCREKRFQCS--ECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       166 ~~C~~~~C~~~f~~~~~L~~H~~-~~~~~~~~~~~~~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~h~  233 (339)
                      |.|.|..|++.|.+...|..|+. .|....        .-....+|.|.  .|++.+.....|..|+++.+
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~--------~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQD--------FKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCC--------CCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcc--------cCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            67999999999999999999984 332211        00012379996  79999999999999998753

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.73  E-value=1.1e-05  Score=43.60  Aligned_cols=26  Identities=27%  Similarity=0.560  Sum_probs=17.6

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhCC
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHTG  162 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~  162 (339)
                      +|.|.+  |++.|.....|..|+++|++
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCC--CCCcCCCHHHHHHHHHHcCC
Confidence            366755  77777777777777777754

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.66  E-value=2.9e-05  Score=42.57  Aligned_cols=29  Identities=34%  Similarity=0.791  Sum_probs=23.5

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTG  162 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  162 (339)
                      ++|.|.++.|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            46899722499999999999999998864

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.65  E-value=1.7e-05  Score=44.08  Aligned_cols=28  Identities=29%  Similarity=0.687  Sum_probs=20.0

Q ss_pred             CeEEeeccccccccCCchhHHHH-HhhhCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAH-LRWHTGE  163 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H-~~~H~~~  163 (339)
                      ++|.|..  |++.|.....|..| +++|.++
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGL--CNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTT--TCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcc--cCcccCChHHHHHHHHHHccCC
Confidence            3577755  77777777777777 5677665

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.76  E-value=8.7e-06  Score=43.78  Aligned_cols=25  Identities=36%  Similarity=0.732  Sum_probs=17.0

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhh
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      ++|.|.+  |++.|.....|..|+++|
T Consensus         1 kp~~C~~--C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCER--CGKRFVQSSQLANHIRHH   25 (26)
Confidence            3567755  777777777777777665

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.57  E-value=0.00046  Score=52.47  Aligned_cols=30  Identities=20%  Similarity=0.448  Sum_probs=27.7

Q ss_pred             ceecCCCCcCCCccccccCChhHHHHHHHh
Q psy13347        202 MTWCREKRFQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       202 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      ..|+|+++|.|..|++.|.+...|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            378899999999999999999999999874

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.06  E-value=0.0098  Score=48.15  Aligned_cols=82  Identities=17%  Similarity=0.328  Sum_probs=42.8

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCS  213 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~  213 (339)
                      ....|...+|+..+. ...|..|... -.-++..|+  .|+..+ .+..|..|+.              .....+.-.|.
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~~-C~~~~v~C~--~C~~~~-~r~~l~~H~~--------------~~C~~r~~~C~  141 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQAH-CEFALMDCP--QCQRPF-QKFHINIHIL--------------KDCPRRQVSCD  141 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHTT-CTTSEEECT--TTCCEE-EGGGHHHHHH--------------HTCTTCEEECT
T ss_pred             cccCCCCCCCCceec-HhHHHHHHhc-CCceeeECC--CCChHH-HHHHHHHHhh--------------hhCCCCCeECC
Confidence            445565445666554 3455666532 223456666  666666 3445666652              12233445566


Q ss_pred             ccccccCChhHHHHHHHhhcCC
Q psy13347        214 ECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       214 ~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      .|+..|.. ..|..|..++.|.
T Consensus       142 ~C~~~~~~-~~l~~H~~~~~~~  162 (170)
T 3hcs_A          142 NCAASMAF-EDKEIHDQNCPLA  162 (170)
T ss_dssp             TTCCEEEG-GGHHHHHTTCCC-
T ss_pred             CCCCccCH-HHHHhHHHhCcCh
Confidence            66665543 3456666665553

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.82  E-value=0.0051  Score=37.57  Aligned_cols=25  Identities=24%  Similarity=0.509  Sum_probs=22.8

Q ss_pred             CCcCCCccccccCChhHHHHHHHhh
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTH  232 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h  232 (339)
                      -+|.|+.|++.|+....|+.||+..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5699999999999999999999844

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.47  E-value=0.0037  Score=48.13  Aligned_cols=74  Identities=19%  Similarity=0.347  Sum_probs=50.7

Q ss_pred             CeEEeeccccccccCCchhHHHHH--hhhCCC-CceecCccccCC-------ccCChHHHHhhhcccCcccchhccccce
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHL--RWHTGE-RPFVCTWQFCGK-------RFTRSDELQVNGGRFGIERTVVRILPMT  203 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~--~~H~~~-k~~~C~~~~C~~-------~f~~~~~L~~H~~~~~~~~~~~~~~~~~  203 (339)
                      +++.|.+  |+..|.....+..|.  +.|... +.|.+   .++.       .|....                  +...
T Consensus        31 ~~~~C~~--C~v~~~S~s~~~~H~~gkkH~~~v~~~~~---~~~~~~~~~~~~~~~~~------------------~~~~   87 (127)
T 1zu1_A           31 SDTQCKV--CSAVLISESQKLAHYQSRKHANKVRRYMA---INQGEDSVPAKKFKAAP------------------AEIS   87 (127)
T ss_dssp             CSSEETT--TTEECCSHHHHHHHHHCHHHHHHHHHHHH---HTTCCCCCSCCCCSCCS------------------SCCS
T ss_pred             CCCcCcC--CCCEeCCHHHHHHHHCcHHHHHHHHHHhc---ccCcccCCCCCccCCCc------------------cccc
Confidence            5688988  999999999999998  466432 34444   2221       111100                  1113


Q ss_pred             ecCCCCcCCCccccccCChhHHHHHHH
Q psy13347        204 WCREKRFQCSECHKKFMRSDHLQKHIK  230 (339)
Q Consensus       204 h~~~k~~~C~~C~k~F~~~~~L~~H~~  230 (339)
                      +.+.+.|-|.+|++.|.+...|..|..
T Consensus        88 ~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           88 DGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             SCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             cCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            456678999999999999999999975

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.53  E-value=0.0081  Score=45.59  Aligned_cols=27  Identities=22%  Similarity=0.360  Sum_probs=13.4

Q ss_pred             hCCCCceecCccccCCccCChHHHHhhhc
Q psy13347        160 HTGERPFVCTWQFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       160 H~~~k~~~C~~~~C~~~f~~~~~L~~H~~  188 (339)
                      |+|+++|.|.  .|++.|.+...|..|++
T Consensus        45 ~tGekpfyC~--~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCL--ACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEET--TTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcc--cCcchhCCHHHHHHHHh
Confidence            4444455554  45555555555555543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.18  E-value=0.019  Score=35.06  Aligned_cols=21  Identities=19%  Similarity=0.464  Sum_probs=11.4

Q ss_pred             ceecCccccCCccCChHHHHhhh
Q psy13347        165 PFVCTWQFCGKRFTRSDELQVNG  187 (339)
Q Consensus       165 ~~~C~~~~C~~~f~~~~~L~~H~  187 (339)
                      +|.|+  .|+..|.....|+.||
T Consensus        12 ~~~CP--rCn~~f~~~~sLr~Hm   32 (49)
T 2e72_A           12 RKICP--RCNAQFRVTEALRGHM   32 (49)
T ss_dssp             CCCCT--TTCCCCSSHHHHHHHH
T ss_pred             ceeCC--cccccccchHHHHhhh
Confidence            35555  5555555555555555

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.36  E-value=0.055  Score=41.44  Aligned_cols=85  Identities=8%  Similarity=0.027  Sum_probs=56.5

Q ss_pred             ccccccccCccccccccccccccccccccc--cccCCC-CeEEeec----cccccccCCchhHHHHHhhhCCCCceecCc
Q psy13347         98 YKTTAEVNNKIRLSSYFYPALISTLFSCSL--RTADRK-KVHICHI----EGCNKVYGKTSHLRAHLRWHTGERPFVCTW  170 (339)
Q Consensus        98 ~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~--~~h~~~-~~~~C~~----~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~  170 (339)
                      +.....+...+.|..|...|.....+..|.  +.|... +.|.+..    +-=++.|...    .+...+.+.+.|.|. 
T Consensus        23 ~~e~~~~~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~-   97 (127)
T 1zu1_A           23 IRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCP-   97 (127)
T ss_dssp             HHHTTTTBCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEET-
T ss_pred             hccccccCCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcC-
Confidence            344555667899999999999999998887  445432 3333311    0002223221    123345667789999 


Q ss_pred             cccCCccCChHHHHhhhc
Q psy13347        171 QFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       171 ~~C~~~f~~~~~L~~H~~  188 (339)
                       .|++.|.+...|..|..
T Consensus        98 -~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           98 -VCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             -TTTEECSSHHHHHHHHT
T ss_pred             -CCCCEeCCHHHHHHHHC
Confidence             99999999999999974

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.95  E-value=0.026  Score=45.56  Aligned_cols=100  Identities=14%  Similarity=0.270  Sum_probs=65.8

Q ss_pred             EeeccccccccCCch-----hHHHHHhhhCCCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcC
Q psy13347        137 ICHIEGCNKVYGKTS-----HLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQ  211 (339)
Q Consensus       137 ~C~~~~C~k~F~~~~-----~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~  211 (339)
                      .|++  |...+....     .+.+-+    ......|+...|+..+. ...|..|.+               .-.-++..
T Consensus        55 ~CP~--Cr~~~~~~~~~~~~~~~~~i----~~l~v~C~n~GC~~~~~-~~~l~~H~~---------------~C~~~~v~  112 (170)
T 3hcs_A           55 KCPV--DNEILLENQLFPDNFAKREI----LSLMVKCPNEGCLHKME-LRHLEDHQA---------------HCEFALMD  112 (170)
T ss_dssp             BCTT--TCCBCCGGGCEECHHHHHHH----HTSEEECCSTTCCCEEE-GGGHHHHHT---------------TCTTSEEE
T ss_pred             CCCC--CccCcchhhhhhhHHHHHHH----hhcccCCCCCCCCceec-HhHHHHHHh---------------cCCceeeE
Confidence            7855  877765431     122222    23567886558888765 456777763               12235678


Q ss_pred             CCccccccCChhHHHHHHHhhcCCC---CCccccccCCccccccccccccCC
Q psy13347        212 CSECHKKFMRSDHLQKHIKTHSKTR---CTSLVMNFSDNTVVTEDSKLELSG  260 (339)
Q Consensus       212 C~~C~k~F~~~~~L~~H~~~h~~~~---C~~C~~~f~~~~~l~~H~~~~~~~  260 (339)
                      |+.|+..+ .+..|..|+...-..+   |..|+..|. ...|..|...+.++
T Consensus       113 C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~  162 (170)
T 3hcs_A          113 CPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLA  162 (170)
T ss_dssp             CTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC-
T ss_pred             CCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcCh
Confidence            99999988 5667999997555555   999998874 56788898777543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=84.67  E-value=0.52  Score=26.80  Aligned_cols=25  Identities=36%  Similarity=0.711  Sum_probs=21.4

Q ss_pred             CcCCCccccccCChhHHHHHHH-hhc
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIK-THS  233 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~-~h~  233 (339)
                      .|.|++|-+.|.+...|..|.. .|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            4999999999999999999965 454

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=82.07  E-value=0.79  Score=26.20  Aligned_cols=25  Identities=20%  Similarity=0.285  Sum_probs=21.7

Q ss_pred             CCCcCCCccccccCChhHHHHHHHh
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      ...+.|..|+.+|..-..+..|++-
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            3568899999999999999999874

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=81.70  E-value=0.44  Score=28.93  Aligned_cols=33  Identities=21%  Similarity=0.478  Sum_probs=22.8

Q ss_pred             CcCCCccccccCChhHHHHHHHhhcCCCCCccccccCC
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKTHSKTRCTSLVMNFSD  246 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~h~~~~C~~C~~~f~~  246 (339)
                      .|.|-.||+.|....     +..--+.+|++||++-..
T Consensus         3 iY~C~rCg~~fs~~e-----l~~lP~IrCpyCGyrii~   35 (48)
T 4ayb_P            3 VYRCGKCWKTFTDEQ-----LKVLPGVRCPYCGYKIIF   35 (48)
T ss_dssp             --CCCCTTTTCCCCC-----SCCCSSSCCTTTCCSCEE
T ss_pred             EEEeeccCCCccHHH-----HhhCCCcccCccCcEEEE
Confidence            499999999998754     123356679999986443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	339
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	7e-09
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.004
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-06
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	2e-06
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	3e-06
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	2e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	4e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	6e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-06
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-06
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	9e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	3e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	6e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	3e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	4e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.003
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	7e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	6e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	3e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	4e-04

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (116), Expect = 7e-09
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 136 HICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTW 170
             C    C K +    HL+ H++ H+  R ++C +
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (74), Expect = 0.004
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)

Query: 210 FQCSE--CHKKFMRSDHLQKHIKTHS 233
           F C E  C K F    HL++H+K HS
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHS 27

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 9e-08
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 17/70 (24%)

Query: 163 ERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRS 222
           ++ + C    CGK FT   +   +          + +          + C  C KKF   
Sbjct: 1   DKLYPCQ---CGKSFTHKSQRDRH----------MSMHLGLRP----YGCGVCGKKFKMK 43

Query: 223 DHLQKHIKTH 232
            HL  H+K H
Sbjct: 44  HHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 1e-04
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 143 CNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
           C K +   S    H+  H G RP+ C    CGK+F     L  
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVG 48

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.2 bits (100), Expect = 1e-06
 Identities = 15/27 (55%), Positives = 19/27 (70%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           +K FQC  C + F RSDHL  HI+TH+
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 2e-06
 Identities = 8/28 (28%), Positives = 20/28 (71%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHT 161
           + ++C  +GCNK + ++++L++H+  H 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 3e-06
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 164 RPFVCTWQFCGKRFTRSDELQV 185
           RP+VC +  C K+F +S  L+ 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKS 22

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 208 KRFQCSE--CHKKFMRSDHLQKHIKTHS 233
           + + C    C+KKF +S +L+ HI TH+
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (97), Expect = 3e-06
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           EK + C EC K F RS  L +H + H+
Sbjct: 5   EKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)

Query: 160 HTGERPFVCTWQFCGKRFTRSDELQV 185
           H+GE+P+ C    CGK F+RS  L  
Sbjct: 2   HSGEKPYGCV--ECGKAFSRSSILVQ 25

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 4e-06
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHS 233
           EK + CS C K F +   L  H K + 
Sbjct: 6   EKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 4e-05
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 158 RWHTGERPFVCTWQFCGKRFTRSDELQV 185
           R HTGE+P+ C+   C K F +   L +
Sbjct: 1   RTHTGEKPYACSH--CDKTFRQKQLLDM 26

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 4e-06
 Identities = 16/30 (53%), Positives = 19/30 (63%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGE 163
           K H C  EGC K Y +  +L+ HLR HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 6e-04
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 164 RPFVCTWQFCGKRFTRSDELQV 185
           +P  CT++ C K ++R + L+ 
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKT 22

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 8/28 (28%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 208 KRFQCSE--CHKKFMRSDHLQKHIKTHS 233
           K  +C+   C K + R ++L+ H+++H+
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHT 28

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 4e-06
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER 164
           +  +C    C K + ++  L+ H R HTGE+
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 6e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)

Query: 164 RPFVCTWQFCGKRFTRSDELQV 185
           RPF+CTW +CGKRFTRSDELQ 
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQR 22

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)

Query: 208 KRFQCS--ECHKKFMRSDHLQKHIKTHS 233
           + F C+   C K+F RSD LQ+H +TH+
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHT 28

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.4 bits (95), Expect = 5e-06
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 207 EKRFQCSE--CHKKFMRSDHLQKHIKTHSK 234
           ++ + C    C K F+R+  L +H K+H +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.6 bits (93), Expect = 9e-06
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 163 ERPFVCTWQFCGKRFTRSDELQV 185
           +RP+ C    C K F R+ +L  
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIR 23

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.5 bits (85), Expect = 1e-04
 Identities = 7/30 (23%), Positives = 14/30 (46%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGE 163
           + + C   GC+K + +   L  H + H  +
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.5 bits (93), Expect = 9e-06
 Identities = 9/26 (34%), Positives = 17/26 (65%)

Query: 208 KRFQCSECHKKFMRSDHLQKHIKTHS 233
           + F C  C + F R +HL++H ++H+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHT 26

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.0 bits (76), Expect = 0.002
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER 164
           +  +C +  C + + +  HL+ H R HT E+
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)

Query: 208 KRFQCSECHKKFMRSDHLQKHIKTHS 233
           K+F C EC K+FMRSDHL KHIKTH 
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQ 26

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 158 RWHTGERPFVCTWQFCGKRFTRSDELQV 185
           R H+GE+P+ C    C  RFT+S  +++
Sbjct: 1   RTHSGEKPYECYI--CHARFTQSGTMKM 26

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 5e-05
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
           EK ++C  CH +F +S  ++ HI   
Sbjct: 6   EKPYECYICHARFTQSGTMKMHILQK 31

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (90), Expect = 2e-05
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTH 232
            K FQC +C + F RSDHL  H K H
Sbjct: 9   IKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (90), Expect = 3e-05
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 156 HLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
             R  TG +PF C    C + F+RSD L +
Sbjct: 2   STRGSTGIKPFQCPD--CDRSFSRSDHLAL 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 3e-05
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGE 163
           K   C  EGC K +    +LR H+R HTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 6e-04
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 164 RPFVCTWQFCGKRFTRSDELQV 185
           +PF CT++ CGKRF+    L+ 
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRT 22

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.5 bits (90), Expect = 3e-05
 Identities = 9/29 (31%), Positives = 19/29 (65%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTG 162
           + + C +E C++ + +++ L  H+R HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 164 RPFVCTWQFCGKRFTRSDELQV 185
           RP+ C  + C +RF+RS +L  
Sbjct: 1   RPYACPVESCDRRFSRSADLTR 22

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.0 bits (81), Expect = 4e-04
 Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 208 KRFQCSE--CHKKFMRSDHLQKHIKTHS 233
           + + C    C ++F RS  L +HI+ H+
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHT 28

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.8 bits (88), Expect = 5e-05
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHSKT 235
           ++ F C  C   F    +  +H+K H+ T
Sbjct: 5   KRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.8 bits (75), Expect = 0.003
 Identities = 7/26 (26%), Positives = 10/26 (38%), Gaps = 2/26 (7%)

Query: 160 HTGERPFVCTWQFCGKRFTRSDELQV 185
            +G+RPF    + C   FT       
Sbjct: 2   SSGKRPF--VCRICLSAFTTKANCAR 25

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.0 bits (88), Expect = 5e-05
 Identities = 6/35 (17%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 151 SHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
             +  +++    ++ F C +  C K F R   ++ 
Sbjct: 5   GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRS 38

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.9 bits (80), Expect = 7e-04
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER 164
           K   C   GC K + +  ++R+H++ H  +R
Sbjct: 17  KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 6e-05
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 133 KKVHICHIEGCNKVYGKTSHLRAHLRW-HTGERPFVC 168
            K +IC    C K + +  HL  H++  HT ERP  C
Sbjct: 3   GKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 3e-04
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIK-THS 233
            K + C  C K F R DHL  HIK  H+
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHT 30

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 3e-04
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 206 REKRFQCSECHKKFMRSDHLQKHIKTHS 233
             +R++C EC K F  S  L KH +TH+
Sbjct: 9   ERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 0.001
 Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 2/30 (6%)

Query: 156 HLRWHTGERPFVCTWQFCGKRFTRSDELQV 185
                   R + C    CGK F+ S +L  
Sbjct: 3   SEWQQRERRRYKCDE--CGKSFSHSSDLSK 30

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.2 bits (81), Expect = 3e-04
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 207 EKRFQCSECHKKFMRSDHLQKHIKTHSK 234
           EK F C  C +KF RSD  ++H K H +
Sbjct: 1   EKPFACDICGRKFARSDERKRHTKIHLR 28

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (81), Expect = 4e-04
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 208 KRFQCSECHKKFMRSDHLQKHIKTHS 233
           K ++C EC K F ++  L  H + H+
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	339
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.52
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.49
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.3
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.25
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.18
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.17
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.17
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.12
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.12
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.11
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.11
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.1
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.09
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.07
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.03
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.0
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.98
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.98
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.96
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.94
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.94
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.92
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.87
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.86
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.84
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.82
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.81
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.81
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.8
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.79
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.79
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.76
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.74
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.73
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.65
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.61
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.58
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.56
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.44
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.43
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.22
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.19
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.14
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.08
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.03
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.93
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.89
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.84
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.82
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.81
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.8
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.79
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.69
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.68
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.66
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.58
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.54
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.5
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.41
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.4
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.39
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.36
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.34
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.33
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.22
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.2
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.16
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.13
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.05
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.04
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.03
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.03
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.99
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.97
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.92
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.83
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.83
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.79
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.78
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.64
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.55
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.35
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.2
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.02
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.01
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.82
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	95.8
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.67
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.48
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.12
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.01
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.0
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.58
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.54
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.46
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.42
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.22
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.85
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.67
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.2
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.2
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.16
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.77
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.57
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	91.42
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.24
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	90.85
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	89.3
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	88.48
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.06
d1y0jb1	36	U-shaped transcription factor, different fingers {	86.02
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	85.45
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	83.99
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	81.84
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	81.68
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	81.48

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.6e-15  Score=98.24  Aligned_cols=53  Identities=30%  Similarity=0.618  Sum_probs=46.9

Q ss_pred             CCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCccccccCChhHHHHHHHhh
Q psy13347        163 ERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSECHKKFMRSDHLQKHIKTH  232 (339)
Q Consensus       163 ~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h  232 (339)
                      ||||.|   .||+.|.....|..|++              +|++++||.|.+||+.|.+...|..|+++|
T Consensus         1 EK~y~C---~Cgk~F~~~~~l~~H~~--------------~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC---QCGKSFTHKSQRDRHMS--------------MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC---TTSCEESSHHHHHHHHH--------------HHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC---CCCCeECCHHHhHHHhh--------------ccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            588999   49999999999999985              788899999999999999999999999887

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1e-14  Score=94.30  Aligned_cols=53  Identities=30%  Similarity=0.612  Sum_probs=50.1

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCCCceecCccccCCccCChHHHHhhhccc
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCTWQFCGKRFTRSDELQVNGGRF  190 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~~C~~~f~~~~~L~~H~~~~  190 (339)
                      +|+|+|  + ||+.|.....|..|+++|++++||.|.  +|++.|...+.|..|+++|
T Consensus         1 EK~y~C--~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~--~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC--Q-CGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC--T-TSCEESSHHHHHHHHHHHSCCCSEECT--TTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC--C-CCCeECCHHHhHHHhhccccccCCcCC--CcCCEecCHHHHHHHHhcC
Confidence            689999  4 999999999999999999999999999  9999999999999999754

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=4.9e-13  Score=79.16  Aligned_cols=36  Identities=33%  Similarity=0.622  Sum_probs=34.0

Q ss_pred             ccceecCCCCcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        200 LPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       200 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      |+++|+++|||.|++|||.|.+.++|..|+++|+|+
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            566999999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=8.3e-13  Score=74.92  Aligned_cols=33  Identities=36%  Similarity=0.633  Sum_probs=31.3

Q ss_pred             eecCCCCcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       203 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      +|+++|||+|.+||+.|.++++|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            478999999999999999999999999999985

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=3.1e-12  Score=74.51  Aligned_cols=33  Identities=33%  Similarity=0.585  Sum_probs=31.7

Q ss_pred             eecCCCCcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        203 TWCREKRFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       203 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      +|+|+|||+|.+||+.|.++++|..|+++|+++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            799999999999999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=5.4e-12  Score=74.03  Aligned_cols=35  Identities=40%  Similarity=0.600  Sum_probs=32.3

Q ss_pred             ccceecCCCCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        200 LPMTWCREKRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       200 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      |.++|+++|||+|++|++.|.++++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            34689999999999999999999999999999975

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=4.9e-12  Score=72.66  Aligned_cols=32  Identities=25%  Similarity=0.552  Sum_probs=30.4

Q ss_pred             ecCCCCcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        204 WCREKRFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       204 h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      |+|+|||+|++|+|.|.++.+|++|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=1.4e-11  Score=76.17  Aligned_cols=44  Identities=20%  Similarity=0.450  Sum_probs=39.2

Q ss_pred             cccccccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        120 STLFSCSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       120 ~~~l~~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      ...|.+|+. |+++++|+|.+++|++.|...++|..|+++|+|+|
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            345677775 99999999998899999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1e-11  Score=71.90  Aligned_cols=34  Identities=26%  Similarity=0.754  Sum_probs=32.9

Q ss_pred             EEeeccccccccCCchhHHHHHhhhCCCCceecC
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLRWHTGERPFVCT  169 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~C~  169 (339)
                      |.|.+++|++.|.++..|++|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            8999999999999999999999999999999996

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.11  E-value=1.7e-11  Score=67.43  Aligned_cols=29  Identities=31%  Similarity=0.917  Sum_probs=27.8

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      |||.|++|++.|.++++|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=9.2e-12  Score=67.60  Aligned_cols=28  Identities=54%  Similarity=1.010  Sum_probs=26.9

Q ss_pred             CCCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      ||||+|++|+|.|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.4e-11  Score=72.76  Aligned_cols=37  Identities=32%  Similarity=0.498  Sum_probs=32.2

Q ss_pred             ccccccCCCCeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        125 CSLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       125 ~h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      +|+++|++++||+|..  |||.|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            5788899999999966  999999999999999999875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.6e-11  Score=71.44  Aligned_cols=36  Identities=39%  Similarity=0.794  Sum_probs=33.2

Q ss_pred             CCCeEEeeccccccccCCchhHHHHHh-hhCCCCceecC
Q psy13347        132 RKKVHICHIEGCNKVYGKTSHLRAHLR-WHTGERPFVCT  169 (339)
Q Consensus       132 ~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~  169 (339)
                      -+|||+|..  ||+.|...++|.+|++ +|++++||.|+
T Consensus         2 ~~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            378999977  9999999999999986 79999999996

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2e-11  Score=70.87  Aligned_cols=33  Identities=30%  Similarity=0.603  Sum_probs=29.5

Q ss_pred             ceecCCCCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        202 MTWCREKRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       202 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      ++|+|+|||+|++|++.|.++.+|+.|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            379999999999999999999999999875544

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.3e-11  Score=66.08  Aligned_cols=29  Identities=66%  Similarity=1.220  Sum_probs=27.7

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      |||.|++|||.|.++++|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999975

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=4.7e-11  Score=70.31  Aligned_cols=38  Identities=29%  Similarity=0.642  Sum_probs=34.1

Q ss_pred             CCCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        162 GERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       162 ~~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      .+|||+|.  +||+.|...++|.+|++             ++|+++|||+|++
T Consensus         2 ~~Kpy~C~--~Cgk~F~~~~~L~~H~r-------------~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQ--SCGKGFSRPDHLNGHIK-------------QVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECS--SSCCEESSHHHHHHHHH-------------HTSCCCCCCCSSS
T ss_pred             CCCCccCC--CCCCCcCChHHhhccCc-------------CccCCCcCcCCcC
Confidence            47999999  99999999999999974             2799999999975

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.00  E-value=6.1e-11  Score=73.18  Aligned_cols=38  Identities=32%  Similarity=0.535  Sum_probs=33.9

Q ss_pred             ccccceecCCCCcCCCc--cccccCChhHHHHHHHhhcCCC
Q psy13347        198 RILPMTWCREKRFQCSE--CHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       198 ~~~~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      .+|+ .|++++||+|.+  |++.|.++++|+.|+++|+|++
T Consensus         8 ~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           8 DKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3344 699999999988  9999999999999999999975

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=8.7e-11  Score=65.48  Aligned_cols=31  Identities=32%  Similarity=0.672  Sum_probs=27.8

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      +||+|++++|+|.|.+.++|.+|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5789988899999999999999999999875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.3e-10  Score=65.69  Aligned_cols=33  Identities=36%  Similarity=0.533  Sum_probs=28.1

Q ss_pred             ccCCCCeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        129 TADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       129 ~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      +|++++||+|..  |++.|...++|..|+++|+||
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            478889999966  999999999999999988875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.1e-10  Score=64.48  Aligned_cols=30  Identities=43%  Similarity=0.827  Sum_probs=27.8

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      |||+|.+++|+|.|.+.++|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            689999999999999999999999999885

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=1.6e-10  Score=67.61  Aligned_cols=34  Identities=26%  Similarity=0.517  Sum_probs=23.1

Q ss_pred             cccccCCCCeEEeeccccccccCCchhHHHHHhhhC
Q psy13347        126 SLRTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus       126 h~~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      |.|+|++++||+|.+  |++.|.++++|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCc
Confidence            456677777777755  7777777777777776664

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.4e-10  Score=63.93  Aligned_cols=30  Identities=53%  Similarity=1.000  Sum_probs=27.1

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      |||+|.+++|+|.|.+.++|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            589999999999999999999999999885

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.7e-10  Score=66.10  Aligned_cols=34  Identities=24%  Similarity=0.434  Sum_probs=27.6

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      |+|++++||+|.+  |++.|..+++|..|+++|+++
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            4688888888866  888888888888888888765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1.4e-10  Score=61.18  Aligned_cols=26  Identities=35%  Similarity=0.750  Sum_probs=25.0

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhc
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      |||+|..|||.|.++++|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999995

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.87  E-value=6e-10  Score=63.76  Aligned_cols=32  Identities=25%  Similarity=0.572  Sum_probs=25.6

Q ss_pred             cCCCCeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        130 ADRKKVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       130 h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      |++++||+|.+  |+|.|.++.+|++|+++|++.
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCCc
Confidence            67788888876  888888888888888888754

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5.9e-10  Score=61.35  Aligned_cols=28  Identities=29%  Similarity=0.754  Sum_probs=26.7

Q ss_pred             CCcCCCc--cccccCChhHHHHHHHhhcCC
Q psy13347        208 KRFQCSE--CHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       208 k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      |||.|++  |+|.|.++++|++|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899999  999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=4.9e-10  Score=64.68  Aligned_cols=36  Identities=22%  Similarity=0.453  Sum_probs=32.6

Q ss_pred             ceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcCCCc
Q psy13347        165 PFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQCSE  214 (339)
Q Consensus       165 ~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~C~~  214 (339)
                      .|.|+|+.|++.|.++..|++|++              +|+++|||+|+.
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r--------------~Htgekpy~C~f   36 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMK--------------LHSDTRDYICEF   36 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHH--------------HHHTSCCCSCCS
T ss_pred             CeECCCCCCCCeeCChhHhccccC--------------eeCCCCCEeCCC
Confidence            388998889999999999999996              899999999973

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=5.7e-10  Score=61.54  Aligned_cols=28  Identities=36%  Similarity=0.725  Sum_probs=26.5

Q ss_pred             CCcCCCc--cccccCChhHHHHHHHhhcCC
Q psy13347        208 KRFQCSE--CHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       208 k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      |||.|++  |+|+|.++++|++|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899988  999999999999999999985

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=5.9e-10  Score=60.76  Aligned_cols=29  Identities=31%  Similarity=0.816  Sum_probs=26.0

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTG  162 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  162 (339)
                      |||+|.+++|+|.|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            58999999999999999999999999875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.81  E-value=7e-10  Score=60.76  Aligned_cols=29  Identities=31%  Similarity=0.892  Sum_probs=25.0

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      +||+|.+  |++.|.+.+.|.+|+++|+|+|
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCCC
Confidence            5788976  9999999999999999998875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.3e-09  Score=63.02  Aligned_cols=31  Identities=23%  Similarity=0.470  Sum_probs=22.5

Q ss_pred             cccCCCCeEEeeccccccccCCchhHHHHHhhh
Q psy13347        128 RTADRKKVHICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       128 ~~h~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      ++|++++||+|++  |++.|..+.+|++|++.+
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHH
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHcccc
Confidence            4677777777766  777777777777776543

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.2e-09  Score=60.67  Aligned_cols=29  Identities=45%  Similarity=0.901  Sum_probs=26.8

Q ss_pred             CCcCCCc--cccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCSE--CHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~--C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      |||.|++  |+|.|.+.++|+.|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6899964  9999999999999999999975

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.79  E-value=1.3e-09  Score=60.91  Aligned_cols=30  Identities=23%  Similarity=0.500  Sum_probs=25.4

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTG  162 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  162 (339)
                      ++||.|.+++|+|.|.+..+|++|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            578888888888888888888888888874

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=1.2e-09  Score=59.13  Aligned_cols=28  Identities=39%  Similarity=0.863  Sum_probs=23.5

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTG  162 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  162 (339)
                      ||||+|.+  |+|.|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            57888866  88888888888888888875

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.1e-09  Score=59.03  Aligned_cols=28  Identities=29%  Similarity=0.810  Sum_probs=23.6

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      +||+|.+++|+|.|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5788888888888888888888888884

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.8e-09  Score=59.00  Aligned_cols=29  Identities=28%  Similarity=0.622  Sum_probs=25.0

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      |+|.|.+  |+|.|.++++|.+|+++|+|+|
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            5788966  9999999999999999998875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.65  E-value=6.9e-09  Score=57.86  Aligned_cols=29  Identities=31%  Similarity=0.836  Sum_probs=27.0

Q ss_pred             CCCcCCCc--cccccCChhHHHHHHHhhcCC
Q psy13347        207 EKRFQCSE--CHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       207 ~k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      ||||.|++  |+|.|.+.++|++|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            58999998  999999999999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.61  E-value=4e-09  Score=57.39  Aligned_cols=27  Identities=33%  Similarity=0.886  Sum_probs=25.6

Q ss_pred             CCcCCCc--cccccCChhHHHHHHHhhcC
Q psy13347        208 KRFQCSE--CHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       208 k~~~C~~--C~k~F~~~~~L~~H~~~h~~  234 (339)
                      |||+|++  |+|.|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899988  99999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.2e-08  Score=50.95  Aligned_cols=26  Identities=35%  Similarity=0.759  Sum_probs=24.4

Q ss_pred             CcCCCccccccCChhHHHHHHHhhcC
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      |++|++|+|.|.++..|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1e-08  Score=55.13  Aligned_cols=26  Identities=42%  Similarity=0.856  Sum_probs=24.7

Q ss_pred             CCcCCCc--cccccCChhHHHHHHHhhc
Q psy13347        208 KRFQCSE--CHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       208 k~~~C~~--C~k~F~~~~~L~~H~~~h~  233 (339)
                      |||.|++  |+|.|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899998  9999999999999999996

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.44  E-value=3.6e-08  Score=50.87  Aligned_cols=27  Identities=48%  Similarity=0.866  Sum_probs=25.5

Q ss_pred             CCCcCCCccccccCChhHHHHHHHhhc
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      +|||.|++||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999985

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=3.5e-08  Score=51.78  Aligned_cols=26  Identities=38%  Similarity=0.572  Sum_probs=19.7

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      |||+|..  |||.|...+.|..|+++|+
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCC--CcCeeccCcccccCccCCC
Confidence            5788844  8888888888888888773

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=1.8e-07  Score=46.53  Aligned_cols=26  Identities=38%  Similarity=0.980  Sum_probs=21.3

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhCC
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHTG  162 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~  162 (339)
                      |++|++  |+|.|+++..|+.|||.|+|
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccch--hhhHhcchhHHHHHhhccCC
Confidence            467877  88888888888888888875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.5e-07  Score=47.82  Aligned_cols=29  Identities=31%  Similarity=0.789  Sum_probs=27.1

Q ss_pred             CCCcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      +|||.|++|..+|.++..+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999874

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=7e-07  Score=46.68  Aligned_cols=29  Identities=38%  Similarity=0.752  Sum_probs=24.5

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTG  162 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  162 (339)
                      +||.|.+++|+|.|...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            57889988999999999999999887553

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.1e-06  Score=46.96  Aligned_cols=32  Identities=38%  Similarity=0.790  Sum_probs=29.1

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCCCcee
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGERPFV  167 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k~~~  167 (339)
                      +...|++  |||.|.....|.+|...|+++|||.
T Consensus         4 k~~~ce~--cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETT--TTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHH--HHHHHHHHHHHHhhhcccCCCCCCC
Confidence            4578977  9999999999999999999999983

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=9.5e-07  Score=45.07  Aligned_cols=29  Identities=28%  Similarity=0.600  Sum_probs=27.0

Q ss_pred             CCCcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      ++||+|..|...-+..+.|..|+|.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999974

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.93  E-value=2.9e-06  Score=43.39  Aligned_cols=27  Identities=33%  Similarity=0.571  Sum_probs=20.2

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhh
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      .||+|..++|++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            467777777777777777777777766

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.89  E-value=4.2e-06  Score=41.76  Aligned_cols=26  Identities=35%  Similarity=0.781  Sum_probs=24.5

Q ss_pred             CCCccccccCChhHHHHHHHhhcCCC
Q psy13347        211 QCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       211 ~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      +|+.|.|.|.++..|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999975

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=3.8e-06  Score=44.22  Aligned_cols=30  Identities=37%  Similarity=0.675  Sum_probs=26.0

Q ss_pred             CeEEeeccccccccCCchhHHHHH-hhhCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHL-RWHTGE  163 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~-~~H~~~  163 (339)
                      +||.|.+++|.|.|++.++-..|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            589999999999999999999997 788643

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=3.7e-06  Score=43.89  Aligned_cols=27  Identities=33%  Similarity=0.703  Sum_probs=24.5

Q ss_pred             CCcCCCc--cccccCChhHHHHHHHhhcC
Q psy13347        208 KRFQCSE--CHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       208 k~~~C~~--C~k~F~~~~~L~~H~~~h~~  234 (339)
                      |||.|.+  |+|+|...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899988  99999999999999998765

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=6.7e-06  Score=42.25  Aligned_cols=25  Identities=24%  Similarity=0.687  Sum_probs=12.6

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhh
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      +||.|++  ||+.|.+....++|.++|
T Consensus         2 kPf~C~~--CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDI--CGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTT--TCCEESSHHHHHHHHGGG
T ss_pred             CCcccch--hhhhhhcchhhhhhhhhc
Confidence            4455544  555555555555555544

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=3.7e-06  Score=42.63  Aligned_cols=26  Identities=35%  Similarity=0.722  Sum_probs=24.0

Q ss_pred             cCCCccccccCChhHHHHHHHhhcCC
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      +.|..|||.|...+.|++|..+|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            57999999999999999999999975

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=8.4e-06  Score=41.77  Aligned_cols=27  Identities=37%  Similarity=0.795  Sum_probs=25.6

Q ss_pred             cCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      |.|+.||......+.|+.|+|.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            899999999999999999999999874

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.69  E-value=7.9e-06  Score=41.73  Aligned_cols=27  Identities=26%  Similarity=0.540  Sum_probs=24.6

Q ss_pred             CceecCccccCCccCChHHHHhhhccc
Q psy13347        164 RPFVCTWQFCGKRFTRSDELQVNGGRF  190 (339)
Q Consensus       164 k~~~C~~~~C~~~f~~~~~L~~H~~~~  190 (339)
                      .||+|+.+.|++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            589999999999999999999998754

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.68  E-value=1.1e-05  Score=41.42  Aligned_cols=30  Identities=43%  Similarity=0.659  Sum_probs=27.0

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      +||.|..++|.|.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            579999999999999999999999999875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=8.4e-06  Score=46.09  Aligned_cols=27  Identities=30%  Similarity=0.763  Sum_probs=24.1

Q ss_pred             cCCCCcCCCccccccCChhHHHHHHHh
Q psy13347        205 CREKRFQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       205 ~~~k~~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      +|.|||.|.+|+|.|.++.++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            367999999999999999999999753

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=1.7e-05  Score=41.28  Aligned_cols=29  Identities=24%  Similarity=0.578  Sum_probs=21.7

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      ++||.|++  |+..|.++..+..|.+.|.|.
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccCc
Confidence            46778876  888888888888888777653

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=2.6e-05  Score=39.64  Aligned_cols=29  Identities=38%  Similarity=0.702  Sum_probs=22.5

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      ++||+|.+  |.+.-...+.|..|+|.|+|+
T Consensus         1 erpfkcql--csy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeee--cccccCCchheEEeeecccCc
Confidence            46788877  888888888888888888763

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=2.3e-05  Score=39.53  Aligned_cols=26  Identities=35%  Similarity=0.718  Sum_probs=24.8

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhc
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      |||+|..|+..-...++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999996

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=4.9e-05  Score=42.31  Aligned_cols=28  Identities=29%  Similarity=0.646  Sum_probs=20.9

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhh
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      ++||.|..++|+..|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            6777777777777777777777777666

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.40  E-value=4.3e-05  Score=37.43  Aligned_cols=24  Identities=25%  Similarity=0.819  Sum_probs=21.7

Q ss_pred             cCCCccccccCChhHHHHHHHhhc
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999885

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=5.3e-05  Score=38.30  Aligned_cols=27  Identities=44%  Similarity=0.832  Sum_probs=21.9

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      .+.|..  |||.|...+.|++|+.+|+++
T Consensus         2 ~hvc~e--cgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAE--CGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTT--TCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHH--HhHHHHHHHHHHHHhhcccCC
Confidence            357844  999999999999998888875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.36  E-value=5.2e-05  Score=38.70  Aligned_cols=29  Identities=34%  Similarity=0.702  Sum_probs=26.4

Q ss_pred             CCCcCCCccccccCChhHHHHHHHhhcCC
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      +.-|.|..|...|+++..|+.||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            35699999999999999999999999985

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=2.9e-05  Score=42.37  Aligned_cols=30  Identities=40%  Similarity=0.802  Sum_probs=25.0

Q ss_pred             CeEEeecccccc---ccCCchhHHHHHhhhCCC
Q psy13347        134 KVHICHIEGCNK---VYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       134 ~~~~C~~~~C~k---~F~~~~~L~~H~~~H~~~  163 (339)
                      +.|.|.|.+|.+   .|.....|..|||+|+||
T Consensus         1 k~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            357899999964   588999999999999875

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=4.9e-05  Score=40.48  Aligned_cols=33  Identities=24%  Similarity=0.475  Sum_probs=28.3

Q ss_pred             CCceecCccccCCccCChHHHHhhhcccCcccchhccccceecCCCCcC
Q psy13347        163 ERPFVCTWQFCGKRFTRSDELQVNGGRFGIERTVVRILPMTWCREKRFQ  211 (339)
Q Consensus       163 ~k~~~C~~~~C~~~f~~~~~L~~H~~~~~~~~~~~~~~~~~h~~~k~~~  211 (339)
                      .+...|.  .||+.|..-..|.+|..              .|+++|||.
T Consensus         3 rk~~~ce--~cgk~frdvyhlnrhkl--------------shs~ekpys   35 (35)
T d2epra1           3 RKQVACE--ICGKIFRDVYHLNRHKL--------------SHSGEKPYS   35 (35)
T ss_dssp             CCSEEET--TTTEEESSHHHHHHHGG--------------GSCSCCCCC
T ss_pred             chhhhHH--HHHHHHHHHHHHHhhhc--------------ccCCCCCCC
Confidence            3567898  99999999999999974              788999983

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=7.7e-05  Score=37.11  Aligned_cols=26  Identities=38%  Similarity=0.648  Sum_probs=21.8

Q ss_pred             EeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        137 ICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       137 ~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      +|+.  |.|.|..+..|+.|-|.|+|++
T Consensus         2 qcp~--c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPT--CHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTT--TCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcc--hHHHHHHhHhhhhccccccCCC
Confidence            5755  9999999999999999888875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.20  E-value=8.9e-05  Score=41.61  Aligned_cols=29  Identities=28%  Similarity=0.737  Sum_probs=26.3

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcCCC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSKTR  236 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~~~  236 (339)
                      +.|+|.+|++.|.+..+|--||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            56999999999999999999999997654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.16  E-value=0.0001  Score=38.64  Aligned_cols=26  Identities=27%  Similarity=0.655  Sum_probs=22.4

Q ss_pred             CcCCCccccccCChhHHHHHHHhhcC
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      ||.|.+|++.|.++.-|.+|...-++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            79999999999999999999765443

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.00011  Score=37.55  Aligned_cols=27  Identities=41%  Similarity=0.586  Sum_probs=21.8

Q ss_pred             EEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      |.|.+  |+......+-|+.|+|.|++++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCCC
Confidence            67866  8888888888888888888764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00013  Score=37.19  Aligned_cols=23  Identities=30%  Similarity=0.759  Sum_probs=21.2

Q ss_pred             CcCCCccccccCChhHHHHHHHh
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      ||.|..|...|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68999999999999999999984

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00027  Score=36.25  Aligned_cols=26  Identities=38%  Similarity=0.678  Sum_probs=23.4

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhc
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      |||+|..|..+....++|+.|+++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            68999999999999999999998644

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.03  E-value=0.00017  Score=37.53  Aligned_cols=30  Identities=47%  Similarity=0.768  Sum_probs=27.6

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      +.|.|.+++|+-.|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            569999999999999999999999999875

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.03  E-value=0.00014  Score=35.59  Aligned_cols=24  Identities=29%  Similarity=0.598  Sum_probs=17.8

Q ss_pred             EEeeccccccccCCchhHHHHHhhhC
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      |+|.+  |.+.|..++.|.+|+++|.
T Consensus         1 ykcgl--cersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhhc
Confidence            56766  7777777777777777774

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.99  E-value=0.00014  Score=37.13  Aligned_cols=28  Identities=43%  Similarity=0.790  Sum_probs=25.2

Q ss_pred             CCcCCCc--cccccCChhHHHHHHHhhcCC
Q psy13347        208 KRFQCSE--CHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       208 k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      |||.|..  |.|.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5788876  999999999999999999875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00017  Score=36.92  Aligned_cols=27  Identities=26%  Similarity=0.572  Sum_probs=24.1

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhcC
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      +||+|++|..--.+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            589999999999999999999986554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00012  Score=38.42  Aligned_cols=27  Identities=37%  Similarity=0.736  Sum_probs=24.1

Q ss_pred             CCcCCCc--cccccCChhHHHHHH-HhhcC
Q psy13347        208 KRFQCSE--CHKKFMRSDHLQKHI-KTHSK  234 (339)
Q Consensus       208 k~~~C~~--C~k~F~~~~~L~~H~-~~h~~  234 (339)
                      |||.|.+  |.|.|...+...+|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            6899988  999999999999997 88865

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00027  Score=39.25  Aligned_cols=29  Identities=41%  Similarity=0.859  Sum_probs=25.9

Q ss_pred             CCCceecCccccCCccCChHHHHhhhccc
Q psy13347        162 GERPFVCTWQFCGKRFTRSDELQVNGGRF  190 (339)
Q Consensus       162 ~~k~~~C~~~~C~~~f~~~~~L~~H~~~~  190 (339)
                      .+|||.|..+.|+.+|.+...|..|.+.|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            47999998889999999999999998654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.83  E-value=0.00041  Score=38.83  Aligned_cols=30  Identities=20%  Similarity=0.557  Sum_probs=22.8

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGER  164 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~k  164 (339)
                      .+.|+|.+  |++.|.+-..|--||+.|..++
T Consensus         3 ~r~~~C~~--C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSF--CKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTT--TCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCC--CCCccCCcccccchHhhhcchH
Confidence            35688877  8888888888888888886543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00042  Score=34.81  Aligned_cols=26  Identities=35%  Similarity=0.602  Sum_probs=21.1

Q ss_pred             CeEEeeccccccccCCchhHHHHHhhhC
Q psy13347        134 KVHICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus       134 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      +||+|..  |.+.-...++|..|+|+|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            6788877  8888888888888888875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.78  E-value=0.00051  Score=34.92  Aligned_cols=29  Identities=34%  Similarity=0.787  Sum_probs=24.5

Q ss_pred             CCeEEeeccccccccCCchhHHHHHhhhCCC
Q psy13347        133 KKVHICHIEGCNKVYGKTSHLRAHLRWHTGE  163 (339)
Q Consensus       133 ~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~  163 (339)
                      +..|.|.+  |...|.+.-.|+.||-.|+|+
T Consensus         2 eqvftcs~--cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSV--CQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHH--HHHHHHHHHhheeeeecccCC
Confidence            45688988  999999999999999888874

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.64  E-value=0.00044  Score=34.47  Aligned_cols=26  Identities=38%  Similarity=0.779  Sum_probs=22.7

Q ss_pred             EEeeccccccccCCchhHHHHHhhhC
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      |.|.+++|+|.|.....|+.|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            78888999999999999999987774

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00075  Score=37.93  Aligned_cols=25  Identities=36%  Similarity=0.818  Sum_probs=22.5

Q ss_pred             CCCCceecCccccCCccCChHHHHhhh
Q psy13347        161 TGERPFVCTWQFCGKRFTRSDELQVNG  187 (339)
Q Consensus       161 ~~~k~~~C~~~~C~~~f~~~~~L~~H~  187 (339)
                      +|-|||.|.  +|+|.|-..+++.+|.
T Consensus         1 TGiKPYeC~--~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECN--ICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECS--SSCCEESCHHHHHHHH
T ss_pred             CCCCceecc--chhhhhhhHHHHHHhh
Confidence            467999999  9999999999999996

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.35  E-value=0.0011  Score=33.15  Aligned_cols=23  Identities=30%  Similarity=0.769  Sum_probs=20.8

Q ss_pred             CcCCCccccccCChhHHHHHHHh
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      ||+|..|||.|-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            69999999999999999999753

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.0015  Score=33.43  Aligned_cols=22  Identities=23%  Similarity=0.573  Sum_probs=12.5

Q ss_pred             eEEeeccccccccCCchhHHHHHh
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLR  158 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~  158 (339)
                      ||.|.+  |.......++|+.|++
T Consensus         2 py~cqy--c~yrsadssnlkthik   23 (30)
T d1klra_           2 TYQCQY--CEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCSS--SSCCCSCSHHHHHHHH
T ss_pred             Cccccc--cccccccchhhhhhhh
Confidence            455555  5555555555555555

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.0018  Score=32.53  Aligned_cols=25  Identities=28%  Similarity=0.465  Sum_probs=22.1

Q ss_pred             CcCCCccccccCChhHHHHHHHhhc
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      |-+|+.|.++..++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4579999999999999999999984

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.01  E-value=0.0016  Score=31.64  Aligned_cols=23  Identities=35%  Similarity=0.884  Sum_probs=21.1

Q ss_pred             CcCCCccccccCChhHHHHHHHh
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      ||+|.-|...|..+..|..||..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            79999999999999999999853

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.82  E-value=0.0033  Score=31.92  Aligned_cols=22  Identities=23%  Similarity=0.546  Sum_probs=12.7

Q ss_pred             eEEeeccccccccCCchhHHHHHh
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLR  158 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~  158 (339)
                      ||.|..  |+..|.++.+|..||+
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHH
T ss_pred             Ccccce--eeeeEeeccchhHhhh
Confidence            355544  6666666666666655

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.80  E-value=0.0038  Score=31.63  Aligned_cols=23  Identities=22%  Similarity=0.759  Sum_probs=18.2

Q ss_pred             EeeccccccccCCchhHHHHHhh
Q psy13347        137 ICHIEGCNKVYGKTSHLRAHLRW  159 (339)
Q Consensus       137 ~C~~~~C~k~F~~~~~L~~H~~~  159 (339)
                      .|++++|++.|++...|.-|.+.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            57778888888888888888763

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.67  E-value=0.0019  Score=32.96  Aligned_cols=22  Identities=23%  Similarity=0.585  Sum_probs=10.9

Q ss_pred             ceecCccccCCccCChHHHHhhhc
Q psy13347        165 PFVCTWQFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       165 ~~~C~~~~C~~~f~~~~~L~~H~~  188 (339)
                      ||+|.  .|....++.++|..|++
T Consensus         2 PFkC~--~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCN--YCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECS--SSSCEESSHHHHHHHHH
T ss_pred             Ccccc--eecccccCcchHHHHHH
Confidence            45554  55554455555555543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.48  E-value=0.0037  Score=32.59  Aligned_cols=22  Identities=23%  Similarity=0.558  Sum_probs=13.0

Q ss_pred             eEEeeccccccccCCchhHHHHHh
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLR  158 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~  158 (339)
                      ||.|.+  |++.|.+...|.+|..
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHT
T ss_pred             Cccccc--ccchhhHHHHHHHHHH
Confidence            456655  6666666666666644

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.12  E-value=0.0053  Score=30.69  Aligned_cols=23  Identities=26%  Similarity=0.738  Sum_probs=21.2

Q ss_pred             cCCCccccccCChhHHHHHHHhh
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKTH  232 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~h  232 (339)
                      |+|+.|+-...+++.|+.|++.-
T Consensus         3 ~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHT
T ss_pred             ccCCcchhheeehhhhhHHhhhc
Confidence            89999999999999999999853

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.0069  Score=35.19  Aligned_cols=26  Identities=27%  Similarity=0.581  Sum_probs=22.8

Q ss_pred             CCcCCCccccccCChhHHHHHHHhhc
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~~h~  233 (339)
                      -.|.|-.|+|.|.....|+.|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            34899999999999999999998874

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.00  E-value=0.0058  Score=31.60  Aligned_cols=28  Identities=32%  Similarity=0.640  Sum_probs=24.8

Q ss_pred             CCcCCCc--cccccCChhHHHHHHHhhcCC
Q psy13347        208 KRFQCSE--CHKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       208 k~~~C~~--C~k~F~~~~~L~~H~~~h~~~  235 (339)
                      |.|.|.+  |+..|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4588876  999999999999999999985

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.58  E-value=0.0085  Score=31.91  Aligned_cols=26  Identities=31%  Similarity=0.721  Sum_probs=22.1

Q ss_pred             CcCCCccccccCChhHHHHHHHhhcC
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKTHSK  234 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~h~~  234 (339)
                      .|.|..|||.|.++..+.+|--..+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48899999999999999998776655

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.54  E-value=0.009  Score=29.07  Aligned_cols=22  Identities=36%  Similarity=0.907  Sum_probs=20.0

Q ss_pred             cCCCccccccCChhHHHHHHHh
Q psy13347        210 FQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       210 ~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      |.|++|-|.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999875

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.46  E-value=0.014  Score=29.27  Aligned_cols=24  Identities=38%  Similarity=0.815  Sum_probs=19.9

Q ss_pred             EeeccccccccCCchhHHHHHhhh
Q psy13347        137 ICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       137 ~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      .|+..+|+|.|...+.++.|+-+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            576678999999988888888777

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.42  E-value=0.011  Score=28.69  Aligned_cols=22  Identities=18%  Similarity=0.493  Sum_probs=16.9

Q ss_pred             eEEeeccccccccCCchhHHHHHh
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLR  158 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~  158 (339)
                      ||+|.-  |...|..+.+|..||.
T Consensus         2 pykcss--csqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSS--CSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSS--SCCEESSHHHHHHHHH
T ss_pred             CCcccH--HHHHHHHHHHHHHHHH
Confidence            678855  8888888888888864

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.22  E-value=0.0086  Score=29.67  Aligned_cols=24  Identities=29%  Similarity=0.681  Sum_probs=20.5

Q ss_pred             cCCCc--cccccCChhHHHHHHHhhc
Q psy13347        210 FQCSE--CHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       210 ~~C~~--C~k~F~~~~~L~~H~~~h~  233 (339)
                      |.|.+  |+|.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            55644  9999999999999998886

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.85  E-value=0.013  Score=31.65  Aligned_cols=20  Identities=20%  Similarity=0.325  Sum_probs=17.3

Q ss_pred             ccccCChhHHHHHHHhhcCC
Q psy13347        216 HKKFMRSDHLQKHIKTHSKT  235 (339)
Q Consensus       216 ~k~F~~~~~L~~H~~~h~~~  235 (339)
                      ++.|..+..|..|||+|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45688999999999999985

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.67  E-value=0.02  Score=28.41  Aligned_cols=22  Identities=36%  Similarity=0.800  Sum_probs=19.1

Q ss_pred             ceecCccccCCccCChHHHHhhhc
Q psy13347        165 PFVCTWQFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       165 ~~~C~~~~C~~~f~~~~~L~~H~~  188 (339)
                      ||+|.  .||+.|..+.+|..|..
T Consensus         1 pf~c~--kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECP--KCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCT--TTCCBCSSHHHHHHHHH
T ss_pred             CCccc--cchhhhhhHhHHHHHHH
Confidence            68898  99999999999988864

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.20  E-value=0.044  Score=27.67  Aligned_cols=25  Identities=16%  Similarity=0.593  Sum_probs=17.8

Q ss_pred             eEEeeccccccccCCchhHHHHHhh
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRW  159 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~  159 (339)
                      .|+|+.++|+-.|.++.+++.|...
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHhh
Confidence            4677767777777777777777653

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.20  E-value=0.04  Score=27.49  Aligned_cols=25  Identities=28%  Similarity=0.489  Sum_probs=18.2

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhC
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHT  161 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~  161 (339)
                      +-+|  ++|.+...++..|+.|.|+|.
T Consensus         2 pekc--~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKC--SECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEEC--SSSSCEESSHHHHHHHHGGGC
T ss_pred             CccC--cccccccCcHHHHHHhhcccc
Confidence            3467  448888888888888888774

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.16  E-value=0.04  Score=27.60  Aligned_cols=19  Identities=37%  Similarity=0.779  Sum_probs=17.0

Q ss_pred             cccccCChhHHHHHHHhhc
Q psy13347        215 CHKKFMRSDHLQKHIKTHS  233 (339)
Q Consensus       215 C~k~F~~~~~L~~H~~~h~  233 (339)
                      |+|.|+..+.++.|+-+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            9999999999999998874

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.77  E-value=0.05  Score=27.04  Aligned_cols=23  Identities=35%  Similarity=0.593  Sum_probs=16.9

Q ss_pred             eEEeeccccccccCCchhHHHHHhh
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRW  159 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~  159 (339)
                      .|+|+.  |+....++++|+.|++.
T Consensus         2 k~qcph--c~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPH--CDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHHH
T ss_pred             CccCCc--chhheeehhhhhHHhhh
Confidence            367754  88888888888888764

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.57  E-value=0.052  Score=27.41  Aligned_cols=28  Identities=29%  Similarity=0.551  Sum_probs=23.7

Q ss_pred             CceecCccccCCccCChHHHHhhhcccC
Q psy13347        164 RPFVCTWQFCGKRFTRSDELQVNGGRFG  191 (339)
Q Consensus       164 k~~~C~~~~C~~~f~~~~~L~~H~~~~~  191 (339)
                      +.|.|+.+.|..+|..+.+++.|..+++
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             CCccccCCCcceEEeehHHHHHHHhhhc
Confidence            4689988899999999999999975443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.42  E-value=0.032  Score=32.27  Aligned_cols=24  Identities=33%  Similarity=0.708  Sum_probs=17.9

Q ss_pred             eEEeeccccccccCCchhHHHHHhhh
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWH  160 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H  160 (339)
                      .|.|.+  |+|.|.....|+.|...|
T Consensus         6 l~pCG~--CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGL--CGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTT--TCCCCSCHHHHHHHHHHH
T ss_pred             eeeccc--cccccCCHHHHhHhHHhc
Confidence            467766  888887777777777766

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.24  E-value=0.05  Score=28.58  Aligned_cols=23  Identities=30%  Similarity=0.606  Sum_probs=20.5

Q ss_pred             CCcCCCccccccCChhHHHHHHH
Q psy13347        208 KRFQCSECHKKFMRSDHLQKHIK  230 (339)
Q Consensus       208 k~~~C~~C~k~F~~~~~L~~H~~  230 (339)
                      -.|.|..||-+|.+.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            34999999999999999999875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.85  E-value=0.07  Score=25.81  Aligned_cols=22  Identities=23%  Similarity=0.584  Sum_probs=15.3

Q ss_pred             EEeeccccccccCCchhHHHHHhh
Q psy13347        136 HICHIEGCNKVYGKTSHLRAHLRW  159 (339)
Q Consensus       136 ~~C~~~~C~k~F~~~~~L~~H~~~  159 (339)
                      |.|++  |=+.|.++.++..|.++
T Consensus         2 ypcp~--cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHH
T ss_pred             cCCch--hhHHhccccCceEEEEE
Confidence            66755  77777777777777653

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.30  E-value=0.11  Score=26.15  Aligned_cols=22  Identities=23%  Similarity=0.528  Sum_probs=19.3

Q ss_pred             ecCccccCCccCChHHHHhhhc
Q psy13347        167 VCTWQFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       167 ~C~~~~C~~~f~~~~~L~~H~~  188 (339)
                      .|+.+.|++.|.+...|.-|.+
T Consensus         2 ~cdf~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHH
Confidence            4777799999999999998875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.48  E-value=0.15  Score=26.92  Aligned_cols=26  Identities=19%  Similarity=0.551  Sum_probs=19.7

Q ss_pred             eEEeeccccccccCCchhHHHHHhhhCC
Q psy13347        135 VHICHIEGCNKVYGKTSHLRAHLRWHTG  162 (339)
Q Consensus       135 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~  162 (339)
                      .|.|..  |+|.|.+...+.+|-....|
T Consensus         4 afvcsk--cgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSK--CGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSS--SCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecc--cccchhcchHHHHHhhhcCC
Confidence            478866  88888888888888765444

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.06  E-value=0.093  Score=33.43  Aligned_cols=24  Identities=25%  Similarity=0.638  Sum_probs=21.3

Q ss_pred             CCCcCCCccccccCChhHHHHHHH
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIK  230 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~  230 (339)
                      .-.|-|..|+|.|.+...|..|++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCEEecccccCccCCHHHHHHHHc
Confidence            345899999999999999999987

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.02  E-value=0.32  Score=25.36  Aligned_cols=21  Identities=29%  Similarity=0.708  Sum_probs=17.0

Q ss_pred             ceecCccccCCccCChHHHHhhh
Q psy13347        165 PFVCTWQFCGKRFTRSDELQVNG  187 (339)
Q Consensus       165 ~~~C~~~~C~~~f~~~~~L~~H~  187 (339)
                      .|.|+  -||..|.+.+.|..|+
T Consensus         8 rf~c~--pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCL--PCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCT--TTCCBCSCHHHHHHHT
T ss_pred             ceecc--ccceeecChhHHHhhh
Confidence            47787  8888888888888886

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.45  E-value=0.36  Score=24.20  Aligned_cols=23  Identities=22%  Similarity=0.560  Sum_probs=20.1

Q ss_pred             CcCCCccccccCChhHHHHHHHh
Q psy13347        209 RFQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       209 ~~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      .|.|..|||..++...++.|+..
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            38999999999999999999653

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.99  E-value=0.29  Score=25.55  Aligned_cols=21  Identities=24%  Similarity=0.771  Sum_probs=14.7

Q ss_pred             eeccccccccCCchhHHHHHh
Q psy13347        138 CHIEGCNKVYGKTSHLRAHLR  158 (339)
Q Consensus       138 C~~~~C~k~F~~~~~L~~H~~  158 (339)
                      |.|.+|++.|.+...|..|+.
T Consensus         4 ChW~~C~~eFdtQd~LV~Hin   24 (32)
T d2glia1           4 CRWDGCSQEFDSQEQLVHHIN   24 (32)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHH
T ss_pred             ccccccccccCCHHHHHHHcc
Confidence            566667777777777777765

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.84  E-value=0.47  Score=24.72  Aligned_cols=22  Identities=23%  Similarity=0.623  Sum_probs=19.6

Q ss_pred             ecCccccCCccCChHHHHhhhc
Q psy13347        167 VCTWQFCGKRFTRSDELQVNGG  188 (339)
Q Consensus       167 ~C~~~~C~~~f~~~~~L~~H~~  188 (339)
                      -|.|..|+..|.....|..|+.
T Consensus         3 nChW~~C~~eFdtQd~LV~Hin   24 (32)
T d2glia1           3 DCRWDGCSQEFDSQEQLVHHIN   24 (32)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHH
T ss_pred             cccccccccccCCHHHHHHHcc
Confidence            4778899999999999999974

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.68  E-value=0.4  Score=27.43  Aligned_cols=26  Identities=23%  Similarity=0.500  Sum_probs=23.2

Q ss_pred             CCCCcCCCccccccCChhHHHHHHHh
Q psy13347        206 REKRFQCSECHKKFMRSDHLQKHIKT  231 (339)
Q Consensus       206 ~~k~~~C~~C~k~F~~~~~L~~H~~~  231 (339)
                      .+.|-.|++|+...++..+|++|+..
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            46789999999999999999999864

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.48  E-value=0.42  Score=25.43  Aligned_cols=26  Identities=31%  Similarity=0.498  Sum_probs=23.0

Q ss_pred             CCCcCCCccccccCChhHHHHHHHhh
Q psy13347        207 EKRFQCSECHKKFMRSDHLQKHIKTH  232 (339)
Q Consensus       207 ~k~~~C~~C~k~F~~~~~L~~H~~~h  232 (339)
                      .+-|.|+.|-|-.++...|.+|+...
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~KC   30 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMKKC   30 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHHT
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHHhC
Confidence            46799999999999999999998753