Psyllid ID: psy13389

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------
Protein Sequence
MDVMSMMGKYVDANEEESKDIEKLVIEESASEDSDDEEDEDFENDENSSGKKMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPKEKSFNCSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQVPANMVGEVGGLIAANLTRDARYPLTVFHSMGV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccHHHHccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccHHHHcccccccccccccccccccccccccHHHccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccEEcccEEEEcccHHHHccccccccccccccccEEEEccccc
Secondary Structure Prediction (SSPRO)
cccHHHcccccccccccccHHHHcHccccccccccccccccEEcccccEEcccccccEccccccEEccccHHHHHHHHcccccccccEcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHccHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEcccccccEEEcccHHHHHHHHccccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEcccEEccccHHHHHHHHHccccccccHHHHHHHHcccccccccccccccEcccccHHHHHHEEccccccccccccccccEccccHHHHHHHHHcHHHHHHHccccccccccccccEEEcccHHHHHHHHcccccccccHccHHHHccccEEccccccccEEEEcHHHccHcccccccEEEEccc
Coil and Loop (DISEMBL)
mdvmsmmgkyvdaneeesKDIEKLVIEesasedsddeededfendenssgkkMVKKfkcnicpkryarknrltnhlrtheagsgdekseggegsftcsqcpktfvdkwhlnrhlkshsenkvfrceqcrfdfyvkreynrhmkihDGVKVFLCSVcsktftdkvkfnrhmrahegikpfqcsvcsesftqrsNLNIHLRihdgirpfqcnvcyicftnksdlnrhsrihngikpflcsmcakcfsrkddlnrhmkihegskrylctmcpkcftrkddlnrhmrnhdglkpfhcsvcfesFTQKALLNIHLRihtnskphacsictesfsqksNLYIHLKLQhgvnpfkcdvcpnetfekETQLSLHMrtvhgvkpfkcsmcdegfpkksvLKEHLRvshnvnpfkcdicfklftkksnlrthikthepipcdkcpeifEKKTDLQEHVDKChnlheedeeegldefdapkeksfncskclnivriPVEIKSLVEKLtsegvpavqayehgedaarDADILVTATyssvpvlkyewLKKKDAHINAVGaglnhhseldaaiyshssiffdsEAAARGELKGLYEQVPANMVGEVGGLIAanltrdaryplTVFHSMGV
Flexible Loop (DISEMBL)
MDVMSMMGKyvdaneeeskdiEKLVIEesasedsddeededfendenssgkkmvkkfkcnicpkryarknrltnhlrtheagsgdekseggeGSFTCSQCPKTFVDKWHLNRHlkshsenkvfrceqCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIhegskrylctmcPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNlrthikthepipcdkcpeIFEKKTDLQEHVDKCHNLHEEdeeegldefdapkeksfncskclniVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQVPANMVGEVGGLIAAnltrdarypltvfhsmgv
Low Complexity Region (SEG)
MDVMSMMGKYVDANEEESKDIEKLVIeesasedsddeededfendenssGKKMVKKFKCNICPKRYARKNRLTNHLRTHEAgsgdekseggegsFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQEHVDKCHNLHeedeeegldefdAPKEKSFNCSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQVPANMVGEVGGLIAANLTRDARYPLTVFHSMGV
Disordered region (IsUnstruct)
*******************************************************KFKCNICPKRYA***************************FTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKT*******************************FNCSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQVPANMVGEVGGLIAANLTRDARYPLTVFH****
Disordered Region (DISOPRED)
***************************ESASEDSDDEEDED**********KMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPKEKSFNCSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQVPANMVGEVGGLIAANLTRDARYPLTVFHSMGV
Disordered Region (DISEMBL)
********KYVDANEEESKDIEKLVIE************************KMVKKFKCNICPKRYARKNRLTNHLRTH****************TCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQEHVDKCHNL***********FDAPKEKSFNCSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQVPANMVGEVGGLIAANLTRDARYPLTVFHSMGV
Disordered Region (DISPRO)
MDVMSMMGKYVDANEEESKDIEKLVIEESASEDSDDEEDEDFENDENSSGKKMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPKEKSFNCSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQVPANMVGEVGGLIAANLTRDARYPLTVFHSMG*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDVMSMMGKYVDANEEESKDIEKLVIEESASEDSDDEEDEDFENDENSSGKKMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPKEKSFNCSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQVPANMVGEVGGLIAANLTRDARYPLTVFHSMGV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	617	2.2.26 [Sep-21-2011]
P51523	738	Zinc finger protein 84 OS	yes	N/A	0.619	0.517	0.398	1e-77
P10076	861	Zinc finger protein 26 OS	no	N/A	0.619	0.443	0.368	3e-75
Q5JVG2	852	Zinc finger protein 484 O	no	N/A	0.619	0.448	0.376	4e-75
Q5RB30	769	Zinc finger protein 585B	no	N/A	0.619	0.496	0.388	7e-75
Q52M93	769	Zinc finger protein 585B	no	N/A	0.619	0.496	0.386	1e-74
Q6P3V2	769	Zinc finger protein 585A	no	N/A	0.619	0.496	0.391	1e-74
Q5RDX1	737	Zinc finger protein 585A	no	N/A	0.619	0.518	0.388	4e-74
Q8N4W9	903	Zinc finger protein 808 O	no	N/A	0.619	0.423	0.371	5e-74
Q5R5U3	672	Zinc finger protein 271 O	no	N/A	0.619	0.568	0.376	8e-74
A0JNB1	787	Zinc finger protein 227 O	no	N/A	0.619	0.485	0.351	9e-74

>sp|P51523|ZNF84_HUMAN Zinc finger protein 84 OS=Homo sapiens GN=ZNF84 PE=1 SV=2

 Score =  291 bits (744), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 158/396 (39%), Positives = 216/396 (54%), Gaps = 14/396 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K + CN C + ++ K+ L NH R H           GE  F C +C K F  K  L  H 
Sbjct: 317 KPYGCNECGRAFSEKSNLINHQRIHT----------GEKPFECRECGKAFSRKSQLVTHH 366

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           ++H+  K F C  CR  F+ K E  RH  IH G K + CS C K F ++     H R H 
Sbjct: 367 RTHTGTKPFGCSDCRKAFFEKSELIRHQTIHTGEKPYECSECRKAFRERSSLINHQRTHT 426

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G KP  C  C ++F+Q+S+L  H   H G +PF C+ C   F+ KS L RH R H G KP
Sbjct: 427 GEKPHGCIQCGKAFSQKSHLISHQMTHTGEKPFICSKCGKAFSRKSQLVRHQRTHTGEKP 486

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           + CS C K FS K  L  H +IH G K Y+C+ C K F +K  L  H R H G KP+ CS
Sbjct: 487 YECSECGKAFSEKLSLTNHQRIHTGEKPYVCSECGKAFCQKSHLISHQRTHTGEKPYECS 546

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C ++F +K+ L  H R HT  KP+ C  C ++FSQKS L  H ++  G  P++C +C  
Sbjct: 547 ECGKAFGEKSSLATHQRTHTGEKPYECRDCEKAFSQKSQLNTHQRIHTGEKPYECSLCRK 606

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
             FEK ++L  H+RT  G KP++C+ C + F +KS L  H R+     PF+C  C K F+
Sbjct: 607 AFFEK-SELIRHLRTHTGEKPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFS 665

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
           +KS+L  H +TH   +P  C +C + F +K+ L  H
Sbjct: 666 RKSHLIPHQRTHTGEKPYGCSECRKAFSQKSQLVNH 701

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  283 bits (724), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 146/396 (36%), Positives = 211/396 (53%), Gaps = 14/396 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K + C  C K +  ++ L  HLR H            E S+ C +C KTF+    L  H+
Sbjct: 272 KPYDCKECGKAFTERSSLIVHLRQHTR----------EKSYECKECGKTFIQPSRLTEHM 321

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           +SH+  K ++C+QC   F        H++ H G K F C++C K FT       H+R H 
Sbjct: 322 RSHTGEKPYQCDQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLGHIRTHT 381

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G KP++C VC ++F+ RS L IHLR H G RP+ C  C   FT+ + L  H + H G KP
Sbjct: 382 GEKPYECKVCGKAFSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKP 441

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           F C +CA+ F     L  H +IH G K Y C  C K FT +  L +H+  H+G KP+ C 
Sbjct: 442 FRCKVCARTFRNSSCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECK 501

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C ++F+  + L  H+RIHT  KP  C  C ++ +  S+L  HL+   G  PF+C+ C +
Sbjct: 502 ECGKAFSTSSGLVEHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQC-D 560

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           +TF + + L +HMRT  G KP++C  C + FP++S L +H+R      P++C  C K F 
Sbjct: 561 KTFTRSSYLRIHMRTHTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFI 620

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
             + L  HIKTH    P  C  C + F   + L+ H
Sbjct: 621 SFAQLTVHIKTHSSERPFQCKVCTKSFRNSSSLETH 656

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q5JVG2|ZN484_HUMAN Zinc finger protein 484 OS=Homo sapiens GN=ZNF484 PE=1 SV=1

 Score =  283 bits (723), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 149/396 (37%), Positives = 221/396 (55%), Gaps = 14/396 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K F+C  C K + RK+ L+ H + H           GE  + C++C K F+ K H   H 
Sbjct: 382 KHFECTECGKAFTRKSTLSMHQKIHT----------GEKPYVCTECGKAFIRKSHFITHE 431

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           + H+  K + C  C   F  K + + H +IH G   F+CS C K FT K     H + H 
Sbjct: 432 RIHTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPFICSECGKVFTHKTNLIIHQKIHT 491

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G +P+ C+VC ++FT RSNL  H +IH G +P++C+ C   FT KS L  H + H G + 
Sbjct: 492 GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERH 551

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           + CS C K F +K  L+ H +IH G K Y+CT C K F  K     H R H G KP+ CS
Sbjct: 552 YECSECGKAFIQKSTLSMHQRIHRGEKPYVCTECGKAFFHKSHFITHERIHTGEKPYECS 611

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
           +C +SFT+K+ L++H +IHT  KP+ C+ C ++F+ +SNL+ H K+  G  P+KC  C  
Sbjct: 612 ICGKSFTKKSQLHVHQQIHTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPYKCSDC-G 670

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           + F +++ L +H ++  G + ++CS C + F +KS L  H R+     P+ C+ C K F 
Sbjct: 671 KAFTRKSGLHIHQQSHTGERHYECSECGKAFARKSTLIMHQRIHTGEKPYICNECGKSFI 730

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
           +KS+L  H + H   +P  C  C + F KK+ L EH
Sbjct: 731 QKSHLNRHRRIHTGEKPYECSDCGKSFIKKSQLHEH 766

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5RB30|Z585B_PONAB Zinc finger protein 585B OS=Pongo abelii GN=ZNF585B PE=2 SV=1

 Score =  281 bits (720), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 218/396 (55%), Gaps = 14/396 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K + C+ C K + +K+ LT H R H           GE S+ C +C   F+ K HL  H 
Sbjct: 380 KPYACSDCGKAFTQKSTLTVHQRIHT----------GEKSYVCMKCGLAFIRKAHLVTHQ 429

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
             H+  K ++C  C   F  K + + H +IH G K ++C+ C K FT++     H + H 
Sbjct: 430 IIHTGEKPYKCGHCGKLFTSKSQLHVHKRIHTGEKPYVCNKCGKAFTNRSDLITHQKTHT 489

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G K + CS C ++FTQRS+L  H RIH G +P++CN C   FT KS+LN H +IH G + 
Sbjct: 490 GEKSYICSKCGKAFTQRSDLITHQRIHTGEKPYECNTCGKAFTQKSNLNIHQKIHTGERQ 549

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           + C  C K F++K  L  H KIH G K Y+CT C + F RK +   H R H G KP+ CS
Sbjct: 550 YECHECGKAFNQKSILIVHQKIHTGEKPYVCTECGRAFIRKSNFITHQRIHTGEKPYECS 609

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C +SFT K+ L +H  +HT  KP+ C+ C ++FS +SNL  H K   G  P+ C  C  
Sbjct: 610 DCGKSFTSKSQLLVHQPLHTGEKPYVCAECGKAFSGRSNLSKHQKTHTGEKPYICSEC-G 668

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           +TF ++++L  H R   G KP++CS C + F KKS L+ H R+     P+ C  C K F+
Sbjct: 669 KTFRQKSELITHHRIHTGEKPYECSDCGKSFTKKSQLQVHQRIHTGEKPYVCAECGKAFS 728

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
            +SNL  H  TH   +P  C  C + F +K+    H
Sbjct: 729 NRSNLNKHQTTHTGDKPYKCGICGKGFVQKSVFSVH 764

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q52M93|Z585B_HUMAN Zinc finger protein 585B OS=Homo sapiens GN=ZNF585B PE=2 SV=1

 Score =  281 bits (719), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 14/396 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K ++C+ C + + +K+ LT H R H           GE S+ C +C   F+ K HL  H 
Sbjct: 380 KPYECSDCGRAFTQKSALTVHQRIHT----------GEKSYICMKCGLAFIRKAHLITHQ 429

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
             H+  K ++C  C   F  K + + H +IH G K ++C+ C K FT++     H + H 
Sbjct: 430 IIHTGEKPYKCGHCGKLFTSKSQLHVHKRIHTGEKPYVCNKCGKAFTNRSNLITHQKTHT 489

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G K + CS C ++FTQRS+L  H RIH G +P++CN C   FT KS+LN H +IH G + 
Sbjct: 490 GEKSYICSKCGKAFTQRSDLITHQRIHTGEKPYECNTCGKAFTQKSNLNIHQKIHTGERQ 549

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           + C  C K F++K  L  H KIH G K Y+CT C + F RK +   H R H G KP+ CS
Sbjct: 550 YECHECGKAFNQKSILIVHQKIHTGEKPYVCTECGRAFIRKSNFITHQRIHTGEKPYECS 609

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C +SFT K+ L +H  +HT  KP+ C+ C ++FS +SNL  H K   G  P+ C  C  
Sbjct: 610 DCGKSFTSKSQLLVHQPVHTGEKPYVCAECGKAFSGRSNLSKHQKTHTGEKPYICSEC-G 668

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           +TF ++++L  H R   G KP++CS C + F KKS L+ H R+     P+ C  C K F+
Sbjct: 669 KTFRQKSELITHHRIHTGEKPYECSDCGKSFTKKSQLQVHQRIHTGEKPYVCAECGKAFS 728

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
            +SNL  H  TH   +P  C  C + F +K+    H
Sbjct: 729 NRSNLNKHQTTHTGDKPYKCGICGKGFVQKSVFSVH 764

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6P3V2|Z585A_HUMAN Zinc finger protein 585A OS=Homo sapiens GN=ZNF585A PE=2 SV=2

 Score =  281 bits (719), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 217/396 (54%), Gaps = 14/396 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K ++C+ C K + +K+ LT H R H           GE S+ C +C   F+ K HL  H 
Sbjct: 380 KPYECSDCGKAFTQKSALTVHQRIHT----------GEKSYICMKCGLAFIQKAHLIAHQ 429

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
             H+  K  +C  C   F  K + + H +IH G K ++C+ C K FT++     H + H 
Sbjct: 430 IIHTGEKPHKCGHCGKLFTSKSQLHVHKRIHTGEKPYMCNKCGKAFTNRSNLITHQKTHT 489

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G K + CS C ++FTQRS+L  H RIH G +P++CN C   FT KS LN H +IH G + 
Sbjct: 490 GEKSYICSKCGKAFTQRSDLITHQRIHTGEKPYECNTCGKAFTQKSHLNIHQKIHTGERQ 549

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           + C  C K F++K  L  H KIH G K Y+CT C + F RK +   H R H G KP+ CS
Sbjct: 550 YECHECGKAFNQKSILIVHQKIHTGEKPYVCTECGRAFIRKSNFITHQRIHTGEKPYECS 609

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C +SFT K+ L +H  +HT  KP+ C+ C ++FS +SNL  H K   G  P+ C  C  
Sbjct: 610 DCGKSFTSKSQLLVHQPVHTGEKPYVCAECGKAFSGRSNLSKHQKTHTGEKPYICSEC-G 668

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           +TF ++++L  H R   G KP++CS C + F KKS L+ H R+     P+ C  C K FT
Sbjct: 669 KTFRQKSELITHHRIHTGEKPYECSDCGKSFTKKSQLQVHQRIHTGEKPYVCAECGKAFT 728

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
            +SNL  H  TH   +P  C  C + F +K+    H
Sbjct: 729 DRSNLNKHQTTHTGDKPYKCGICGKGFVQKSVFSVH 764

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5RDX1|Z585A_PONAB Zinc finger protein 585A OS=Pongo abelii GN=ZNF585A PE=2 SV=1

 Score =  279 bits (714), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 216/396 (54%), Gaps = 14/396 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K + C+ C K + +K+ LT H R H           GE S+ C +C   F+ K HL  H 
Sbjct: 348 KPYACSDCGKAFTQKSALTVHQRIHT----------GEKSYICMKCGLAFIQKAHLIAHQ 397

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
             H+  K ++C  C   F  K + + H +IH G K ++C+ C K FT++     H + H 
Sbjct: 398 IIHTGEKPYKCGHCGKLFTSKSQLHVHKRIHTGEKPYMCNKCGKAFTNRSNLITHQKTHT 457

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G K + CS C ++FTQRS+L  H RIH G +P++C+ C   FT KS LN H +IH G + 
Sbjct: 458 GEKSYICSKCGKAFTQRSDLITHQRIHTGEKPYECSTCGKAFTQKSHLNIHQKIHTGERQ 517

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           + C  C K F++K  L  H KIH G K Y+CT C + F RK +   H R H G KP+ CS
Sbjct: 518 YECHECGKAFNQKSILIVHQKIHTGEKPYVCTECGRAFIRKSNFITHQRIHTGEKPYECS 577

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C +SFT K+ L +H  +HT  KP+ C+ C ++FS +SNL  H K   G  P+ C  C  
Sbjct: 578 DCGKSFTSKSQLLVHQPLHTGEKPYVCAECGKAFSGRSNLSKHQKTHTGEKPYICSEC-G 636

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           +TF ++++L  H R   G KP++CS C + F KKS L+ H R+     P+ C  C K FT
Sbjct: 637 KTFRQKSELITHHRIHTGEKPYECSDCGKSFTKKSQLQVHQRIHTGEKPYVCAECGKAFT 696

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
            +SNL  H  TH    P  C  C + F +K+    H
Sbjct: 697 DRSNLNKHQTTHTGDRPYKCGICGKGFVQKSVFSVH 732

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q8N4W9|ZN808_HUMAN Zinc finger protein 808 OS=Homo sapiens GN=ZNF808 PE=2 SV=2

 Score =  279 bits (714), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 147/396 (37%), Positives = 218/396 (55%), Gaps = 14/396 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K +KCN C K ++R++ L  H R H           GE  + C+QC  TF  +  L  H 
Sbjct: 481 KTYKCNECRKTFSRRSSLLCHRRLH----------SGEKPYKCNQCGNTFRHRASLVYHR 530

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           + H+  K ++C  C   F        H +IH   K + C+ C K F  +   +RH R H 
Sbjct: 531 RLHTLEKSYKCTVCNKVFMRNSVLAVHTRIHTAKKPYKCNECGKAFNQQSHLSRHRRLHT 590

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G KP++C  C + F Q+S L  H RIH G +P++C VC   FT  S L RH+RIH G K 
Sbjct: 591 GEKPYKCEACDKVFGQKSALESHKRIHTGEKPYRCQVCDTAFTWNSQLARHTRIHTGEKT 650

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           + C+ C K FS K  L  H ++H G K Y C +C K F  +  + +H R H G+KP+ C+
Sbjct: 651 YKCNECGKTFSYKSSLVWHRRLHGGEKSYKCKVCDKAFVCRSYVAKHTRIHSGMKPYKCN 710

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C ++F+ ++ L  H RIH+  KP+ CS C+++FSQK+ L  H +L  G  P+KC+ C N
Sbjct: 711 ECSKTFSNRSSLVCHRRIHSGEKPYKCSECSKTFSQKATLLCHRRLHSGEKPYKCNDCGN 770

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
            TF   + L  H R   G K +KC++CD+ F + S L  H+R+     P+KC+ C K F 
Sbjct: 771 -TFRHWSSLVYHRRLHTGEKSYKCTVCDKAFVRNSYLARHIRIHTAEKPYKCNECGKAFN 829

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
           ++S+L  H + H   +P  C+ C ++F +K+ L+ H
Sbjct: 830 EQSHLSRHHRIHTGEKPYKCEACDKVFSRKSHLKRH 865

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5R5U3|ZN271_PONAB Zinc finger protein 271 OS=Pongo abelii GN=ZNF271 PE=2 SV=1

 Score =  278 bits (711), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 149/396 (37%), Positives = 221/396 (55%), Gaps = 14/396 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K +KC++C K +++ + L  H R H           GE  + C+QC K+F     L +H 
Sbjct: 245 KPYKCDVCAKAFSQSSDLILHQRIHT----------GEKPYPCNQCSKSFSQNSDLIKHR 294

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           + H+  K ++C +C   F        H +IH G K + C  CSKTF+       H R H 
Sbjct: 295 RIHTGEKPYKCNECGKAFNQSSVLILHQRIHTGEKPYPCDQCSKTFSRLSDLINHQRIHT 354

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G KP+ C+ C++ F++RS+L  H RIH G +P++C+ C   F+  S+L  H RIH G KP
Sbjct: 355 GEKPYPCNQCNKMFSRRSDLVKHHRIHTGEKPYECDECGKTFSQSSNLILHQRIHTGEKP 414

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           + CS C K FSR+ DL +H +IH G K Y C  C K F++  DL +H R H G KP+HC+
Sbjct: 415 YPCSDCTKSFSRRSDLVKHQRIHTGEKPYACNQCDKSFSQSSDLTKHQRVHSGEKPYHCN 474

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C ++F+Q + L +H RIHT  KP+ C+ C++SFSQ S+L  H ++  G  P+KC  C  
Sbjct: 475 SCEKAFSQSSDLILHQRIHTGEKPYLCTQCSKSFSQNSDLIKHQRIHTGEKPYKCSEC-R 533

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           + F + + L+LH R   G KP  C+ C + F + S L  H ++     P+KCD C K F+
Sbjct: 534 KAFSQCSALTLHQRIHTGEKPNPCNECGKSFSRHSDLINHQKIHTGEKPYKCDACGKAFS 593

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
             ++L  H K H   +P  C +C   F + ++L  H
Sbjct: 594 TCTDLIEHQKIHAGEKPYRCVQCSRSFSQLSELTIH 629

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|A0JNB1|ZN227_BOVIN Zinc finger protein 227 OS=Bos taurus GN=ZNF227 PE=2 SV=1

 Score =  278 bits (711), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 139/396 (35%), Positives = 206/396 (52%), Gaps = 14/396 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K ++C+ C K +     L  H RTH           GE  + C  C K F    +   H 
Sbjct: 310 KSYRCDSCGKAFGSSTGLIIHYRTHT----------GEKPYRCEACGKCFSQSSNFQCHQ 359

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           + H+E K ++CE+C   F        H ++H G K + C  C K FT    ++ H R H 
Sbjct: 360 RVHTEEKPYKCEECGKGFGWSVNLRVHQRVHRGEKPYKCEECGKGFTQAAHYHIHQRVHT 419

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G KP++C VC + F+  S L  H R+H G +P++C  C   FT  +DL+ H R+H G KP
Sbjct: 420 GEKPYKCDVCGKGFSHNSPLICHRRVHTGEKPYRCEACGKGFTRNTDLHIHFRVHTGEKP 479

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           + C  C K FS+  +L  H  +H G KR+ C  C K F++   L  H R H G KP+ C 
Sbjct: 480 YTCKECGKGFSQASNLQVHQNVHTGEKRFKCETCGKGFSQSSKLQTHQRVHTGEKPYRCD 539

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
           VC + F+  + L +H  IHT  KP+ C  C + FS +SNL+ H ++  G  P+KC+ C +
Sbjct: 540 VCGKDFSYSSNLKLHQVIHTGEKPYTCEACGKGFSWRSNLHAHQRVHSGEKPYKCEAC-D 598

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           ++F +     +H R   G KP+KC +C +GF + S L+ H RV     P+KCD+C K F 
Sbjct: 599 KSFSQAIDFRVHQRVHTGEKPYKCGVCGKGFSQSSGLQSHQRVHTGEKPYKCDVCGKGFR 658

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
             S    H + H   +P  C++C + F +  +L+ H
Sbjct: 659 YSSQFIYHQRGHTGEKPYKCEECGKGFGRSLNLRHH 694

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	617
326666835	576	PREDICTED: zinc finger protein 271-like	0.659	0.706	0.410	5e-88
326667171	681	PREDICTED: zinc finger protein 850-like	0.661	0.599	0.400	7e-88
326667187	1365	PREDICTED: zinc finger protein 729-like	0.620	0.280	0.425	3e-87
326680879	710	PREDICTED: zinc finger protein 721-like,	0.658	0.571	0.409	1e-86
326667106	941	PREDICTED: zinc finger protein 729-like	0.620	0.407	0.423	3e-86
326680667	1782	PREDICTED: zinc finger protein 729-like	0.661	0.228	0.393	1e-85
390345459	581	PREDICTED: zinc finger protein 84-like [	0.620	0.659	0.423	7e-85
326670221	661	PREDICTED: zinc finger protein 91-like [	0.620	0.579	0.420	2e-84
443728181	462	hypothetical protein CAPTEDRAFT_135345 [	0.622	0.831	0.399	6e-84
326666983	853	PREDICTED: zinc finger protein 91-like [	0.614	0.444	0.414	5e-83

>gi|326666835|ref|XP_003198391.1| PREDICTED: zinc finger protein 271-like [Danio rerio]

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 177/431 (41%), Positives = 240/431 (55%), Gaps = 24/431 (5%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           + F C  C K +++ + L  H+R H           GE  FTC+QC K+F    HLN H+
Sbjct: 115 RPFTCTQCGKSFSQSSSLNQHMRIHT----------GEKPFTCTQCEKSFSQSSHLNEHM 164

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
             H+  K F C QCR +FY     N+HM+IH G K F C+ C K+F+     N HMR H 
Sbjct: 165 MIHTGKKPFTCTQCRKNFYCSSHLNKHMRIHTGEKPFTCTQCGKSFSRSSSLNLHMRIHT 224

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G+KPF C+ C +SF   S+LN+H+RIH G +PF C  C   F   S LNRH RIH G KP
Sbjct: 225 GVKPFTCTRCGKSFNCSSSLNLHMRIHTGEKPFTCTRCGKSFNCSSSLNRHMRIHTGEKP 284

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           F C+ C K FS+   LN HM IH G K + CT C K F++   LN+HMR H G KPF C+
Sbjct: 285 FTCTQCEKSFSQSSHLNEHMMIHTGRKPFTCTQCGKSFSQSSYLNQHMRIHTGEKPFICT 344

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C +SF+  + LN H+RIHT  KP  C+ C +SFSQ S+L +H+++  G  PFKC +C  
Sbjct: 345 HCGKSFSHSSSLNQHMRIHTGEKPFTCTQCGKSFSQSSSLNLHMRIHTGKKPFKCTLC-G 403

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           ++F + + L+ HM    G KPF C+ C + F + S L  H+R+     PF C  C K F+
Sbjct: 404 KSFSQSSSLNQHMMIHTGEKPFTCTQCGKSFSQSSSLNLHMRIHTGDKPFTCTQCRKSFS 463

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPK- 470
             S+L  H++ H   +P  C +C + F + +    H+     +H      G   F  PK 
Sbjct: 464 NSSSLYRHMRIHTGEKPFTCTQCGKSFIQSSSFNVHM----RIH-----TGEKPFTCPKC 514

Query: 471 EKSFNCSKCLN 481
            KSF  S  LN
Sbjct: 515 GKSFRKSSSLN 525

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667171|ref|XP_003198510.1| PREDICTED: zinc finger protein 850-like [Danio rerio]

 Score =  331 bits (848), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 176/439 (40%), Positives = 238/439 (54%), Gaps = 31/439 (7%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K F C  C K +++ + L  H+R H           GE  +TC QC K+F    +LN+H+
Sbjct: 232 KPFTCPQCGKSFSQSSHLNKHMRIHT----------GEKPYTCPQCGKSFSQSSYLNKHM 281

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           + H+  K F   QC  +FY     N+HM+IH G K+F C+ C K+F++    N+HMR H 
Sbjct: 282 RIHTGEKPFTSNQCGKNFYCSSNLNQHMRIHTGEKLFTCTQCGKSFSNSTNLNQHMRIHT 341

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G KPF C+ C +SF+Q SNLN H+RIH G +PF C+ C   F+  S LN H  IH G KP
Sbjct: 342 GEKPFTCTQCGKSFSQSSNLNHHMRIHTGEKPFTCSQCGKSFSQSSSLNLHMMIHTGEKP 401

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           F C+ C K FS+   LN HM+ H G K + C  C K F++   LN+HMR H G K F C+
Sbjct: 402 FTCTQCGKSFSQSSILNIHMRNHTGEKPFTCLQCGKSFSQSTSLNQHMRIHTGEKLFTCT 461

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C +SF+  A LN H+RIHT  KP  C+ C +SFSQ SNL IH+++  G  PF C  C  
Sbjct: 462 QCGKSFSNSANLNQHMRIHTGEKPFTCTQCGKSFSQSSNLNIHMRIHTGEKPFTCSQC-G 520

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           ++F +   L+ HMR   G KPF CS C + F + S L  H+R+     PF C  C K F+
Sbjct: 521 KSFSQSPYLNHHMRIHTGEKPFTCSQCGKSFSQSSSLNLHMRIHTGEKPFTCTQCGKSFS 580

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPKE 471
           + SNL  H++ H   +P  C +C + F + T L  H+                      E
Sbjct: 581 QSSNLNIHMRNHTGEKPFTCLQCGKSFSQSTSLNRHM-----------------MIHTGE 623

Query: 472 KSFNCSKCLNIVRIPVEIK 490
           K F C KC N      E+K
Sbjct: 624 KEFMCLKCENTFITAAELK 642

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667187|ref|XP_001920997.3| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 169/397 (42%), Positives = 230/397 (57%), Gaps = 14/397 (3%)

Query: 55   KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
            K FKC  C K +++ + L  H+R H           GE  FTC+QC K+F     LN+H+
Sbjct: 683  KPFKCLQCGKSFSQSSSLNQHMRIHT----------GEKPFTCTQCGKSFSKSSSLNKHM 732

Query: 115  KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
            + H+  K F C QC   F      N+HM+IH G K F+C+ C K+F+     N HM+ H 
Sbjct: 733  RIHTGEKPFTCTQCGKCFTCSSNLNQHMRIHTGEKPFICTQCGKSFSQSSSLNYHMKFHA 792

Query: 175  GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
            G KPF C+ C +SF+Q S+LN H+RIH G +PF C  C  CFT  S+LN+H RIH G KP
Sbjct: 793  GEKPFTCTQCGKSFSQSSHLNKHMRIHTGEKPFTCTQCGKCFTCSSNLNQHMRIHTGEKP 852

Query: 235  FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
            F+C+ C K FS+   LN HMKIH G K + CT C K F++   LN HMR H G KPF C+
Sbjct: 853  FICTQCGKSFSQSTSLNYHMKIHTGEKPFTCTQCGKSFSQSSSLNLHMRIHTGEKPFTCT 912

Query: 295  VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
             C +SF+Q + LN+H+RIHT  KP  C  C +SFS  S+L  H+K+  G  PF C  C  
Sbjct: 913  QCGKSFSQSSSLNLHVRIHTGEKPFTCPQCGKSFSHSSHLNCHMKIHTGEKPFTCPHC-G 971

Query: 355  ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
            ++F + + L+ HM+   G KPF C  C + F + S L  H+ +     PF C  C K FT
Sbjct: 972  KSFSQSSHLNCHMKIHTGEKPFTCPQCGKSFSQSSNLNCHMTIHTGEKPFTCTQCGKSFT 1031

Query: 415  KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHV 448
              S+L  H++ H   +P  C +C + F K ++L  H+
Sbjct: 1032 CSSHLHQHMRIHTGEKPFTCTQCGKAFNKSSNLNLHM 1068

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326680879|ref|XP_003201653.1| PREDICTED: zinc finger protein 721-like, partial [Danio rerio]

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 179/437 (40%), Positives = 236/437 (54%), Gaps = 31/437 (7%)

Query: 57  FKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKS 116
           F CN C K  A K++L  H+R H            E  FTC+QC K F    +LN+H++ 
Sbjct: 103 FTCNQCGKSLANKSKLKIHMRIHNR----------EKLFTCTQCGKNFNQSSNLNQHMRI 152

Query: 117 HSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGI 176
           H+  K+F C QC   F      N HM+IH G K F C+ C K+F++    N+HMR H G 
Sbjct: 153 HTGEKLFTCTQCGKSFSNSANLNIHMRIHTGEKPFTCTQCGKSFSNSANLNQHMRIHTGE 212

Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFL 236
           KPF C+ C +SF+Q SNLN+H+RIH G +PF C+ C   F+  S LN H RIH G KPF 
Sbjct: 213 KPFTCTQCGKSFSQSSNLNLHMRIHTGEKPFTCSQCGKSFSQSSSLNLHMRIHTGEKPFT 272

Query: 237 CSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVC 296
           C+ C K FS+   LN HM+ H G K + C  C K F++   LN+HMR H G   F C+ C
Sbjct: 273 CTQCGKSFSQSSILNIHMRNHTGEKPFTCLQCGKSFSQSTYLNQHMRIHTGENLFTCTHC 332

Query: 297 FESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNET 356
            +SF+  A LN+H+RIHT  KP  C+ C +SFSQ SNL IH+++  G  PF C  C  ++
Sbjct: 333 GKSFSNSANLNLHMRIHTGEKPFTCTQCGKSFSQSSNLNIHMRIHTGEKPFTCSQC-GKS 391

Query: 357 FEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKK 416
           F +   L+ HMR   G KPF CS C + F K S L  HLR+     PF C  C   F++ 
Sbjct: 392 FSQSPYLNHHMRIHTGEKPFTCSQCGKSFSKSSNLNLHLRIHTGEKPFTCTQCGTSFSQS 451

Query: 417 SNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPKEKS 473
           SNL  H++ H   +P  C +C + F + T L  H+                      EK 
Sbjct: 452 SNLNIHMRNHTGEKPFTCLQCGKSFSRSTSLNRHM-----------------MIHTGEKE 494

Query: 474 FNCSKCLNIVRIPVEIK 490
           F C KC N      E+K
Sbjct: 495 FMCLKCENTFITAAELK 511

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667106|ref|XP_003198487.1| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 168/397 (42%), Positives = 223/397 (56%), Gaps = 14/397 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K F C  C K +   + L  H+R H           GE  FTC+QC K F    HLN+H+
Sbjct: 372 KPFTCTQCGKSFTCSSHLHQHMRIHT----------GEKPFTCTQCGKCFNCSSHLNQHI 421

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           + HS  K F C QC  +F      N+HM+IH G K F C+ C K+F++    N+HMR H 
Sbjct: 422 RIHSGEKPFTCTQCGKNFNQSSHLNQHMRIHTGEKPFTCTQCGKSFSNSANLNQHMRIHT 481

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G KPF C+ C +SF+Q S LNIH+RIH G +PF C  C   F+    LN+H RIH G KP
Sbjct: 482 GEKPFTCTQCGKSFSQSSYLNIHMRIHTGEKPFTCPQCGKSFSQSQYLNQHMRIHTGEKP 541

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           F CS C K FS+   LN H++IH G K + CT C K F +   LN HMRNH G KPF C 
Sbjct: 542 FTCSQCGKSFSQSSSLNLHIRIHTGEKPFTCTQCGKSFNKSSILNIHMRNHTGEKPFTCL 601

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C +SF+Q   LN H+RIHT  K   C+ C +SFS  +NL  H+++  G  PF C  C  
Sbjct: 602 QCGKSFSQSTSLNQHMRIHTGEKLFTCTQCGKSFSNSANLNQHMRIHTGEKPFTCSQC-G 660

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           ++F + + L++HMR   G KPF C  C + F +   L  H+R+     PF C  C K F+
Sbjct: 661 KSFSQSSYLNIHMRIHTGEKPFTCPQCGKSFSQSPYLNHHMRIHTGEKPFTCTQCGKSFS 720

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHV 448
           + SNL  H++ H   +P  C +C + F + T L  H+
Sbjct: 721 QSSNLNIHMRNHSGEKPFTCTQCEKSFSQSTSLNRHM 757

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326680667|ref|XP_003201586.1| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 169/430 (39%), Positives = 242/430 (56%), Gaps = 22/430 (5%)

Query: 55   KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
            + + C  C K +++   L  H+R H           GE  ++CSQC K+F     L  H+
Sbjct: 649  RPYTCQHCGKSFSKTGNLAVHMRIHT----------GEKPYSCSQCGKSFKQNVTLKIHM 698

Query: 115  KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
            ++H+E ++F C QC      K   + HM+IH G K + C+ C K+F  K     HM +H 
Sbjct: 699  RTHNEERIFTCTQCGKSISQKHYLDIHMRIHTGEKPYTCTECGKSFPYKGSLKHHMISHT 758

Query: 175  GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
            G KPF C+ C ++F Q S+LN H+RIH G +PF C  C   F+  ++LN+H RIH G KP
Sbjct: 759  GEKPFACTQCGKNFNQSSHLNQHMRIHTGEKPFTCTQCGKSFSYSANLNQHMRIHTGEKP 818

Query: 235  FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
            F C+ C K FS   +LN+HM+IH G K + CT C K F++   LN+HMR H G KPF CS
Sbjct: 819  FTCTQCGKSFSNSANLNQHMRIHTGEKPFTCTQCGKSFSQSSYLNQHMRIHTGEKPFTCS 878

Query: 295  VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
             C +SF+Q   LN H+RIHT  KP  CS C +SFSQ S+LY+H+++  G  PF C  C  
Sbjct: 879  QCGKSFSQSPYLNQHMRIHTGEKPFTCSQCGKSFSQSSSLYLHMRIHTGEKPFTCTQC-G 937

Query: 355  ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
            ++F K + L++HMR   G KPF C  C + F + + L  H+R+     PF C  C K F+
Sbjct: 938  KSFSKSSNLNIHMRNHTGEKPFTCLQCGKSFSQSTSLNLHMRIHTGEKPFTCTQCGKSFS 997

Query: 415  KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPKE 471
            + SN   H++ H   +P  C +C + F K + L +H+     +H  ++     +      
Sbjct: 998  QSSNPNIHMRNHIGEKPFTCTQCGKSFSKSSSLNQHM----RIHAGEKPSACSQCG---- 1049

Query: 472  KSFNCSKCLN 481
            KSF+CS  LN
Sbjct: 1050 KSFSCSSHLN 1059

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|390345459|ref|XP_003726339.1| PREDICTED: zinc finger protein 84-like [Strongylocentrotus purpuratus]

 Score =  321 bits (822), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 168/397 (42%), Positives = 227/397 (57%), Gaps = 14/397 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K  +C  C K +++ N+LT HLRTH           GE  F CS C K F  + HL  HL
Sbjct: 124 KPHQCPYCDKEFSQNNKLTRHLRTHT----------GEKPFKCSLCDKDFTQQNHLTSHL 173

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           ++H+  K F+C  C   F  +   N H++ H G K F CS C K F+ K     H+R H 
Sbjct: 174 RTHTGEKPFKCSHCDKGFSCRSNLNCHVRTHTGEKPFECSQCDKGFSQKTTLINHLRTHS 233

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G KP+QC  C + F+++  L  HLR H G +PF+C+ C+  F+ K+ L RH R H G KP
Sbjct: 234 GEKPYQCPYCEKEFSKKDVLTTHLRTHTGEKPFKCSQCHKEFSQKTKLTRHLRTHTGEKP 293

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           F CS C K FS +  L  H++IH G K + C  C K F+ K  L RH+R H G KPF CS
Sbjct: 294 FKCSQCDKDFSYRSTLFIHLRIHSGEKPHQCPYCDKEFSLKAKLTRHLRTHTGEKPFKCS 353

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C + F+ ++ L IHLR H+  KPH C  C + FSQKS L  HL++  G  PFKC  C +
Sbjct: 354 QCDKDFSHRSALFIHLRTHSGEKPHQCPYCDKGFSQKSQLTSHLRIHTGEKPFKCSQC-D 412

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           + F ++  L+ H+RT  G KPFKCS CD GF +K+ L  HLR      P++C  C K F+
Sbjct: 413 KDFTQQNHLTSHLRTHTGEKPFKCSHCDTGFSQKTTLINHLRTHSGERPYQCPYCEKEFS 472

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHV 448
           KK  L THI+TH   +P  C +C + F +++ L  H+
Sbjct: 473 KKDELTTHIRTHTGEKPFKCSQCHKGFARRSTLINHL 509

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|326670221|ref|XP_003199165.1| PREDICTED: zinc finger protein 91-like [Danio rerio]

 Score =  319 bits (818), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 167/397 (42%), Positives = 223/397 (56%), Gaps = 14/397 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K F C  C K ++  + L  H+R H           GE  FTC+QC K+F    HLN+H+
Sbjct: 8   KPFLCTECGKSFSCSSHLNQHMRVHT----------GEKPFTCTQCGKSFSQSSHLNKHM 57

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           + H+  K F C QC   F      N+HM+IH G K F C+ C K+F+     ++HMR H 
Sbjct: 58  RIHTGEKPFICTQCGKSFNCSSHLNKHMRIHTGEKPFTCTQCGKSFSQLSNLHQHMRIHT 117

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G KPF C+ C +SF+Q S+LN H+RIH G +PF C  C   F++ S LN H RIH G KP
Sbjct: 118 GEKPFTCTQCGKSFSQSSSLNQHMRIHTGEKPFTCTQCGKSFSHSSSLNLHMRIHTGEKP 177

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           F C+ C K FS    LN HM+IH G K + CT C KCF++  +LN+HMR H   KPF C+
Sbjct: 178 FTCTQCGKSFSHSSSLNLHMRIHTGEKPFTCTQCGKCFSQSSNLNQHMRIHTKEKPFTCT 237

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
            C +SF+  + LNIH+RIHT  KP AC+ C +SFS  S+L  H  +  G  PF C  C  
Sbjct: 238 YCGKSFSLSSSLNIHMRIHTGEKPFACTQCGKSFSCLSHLNHHKWIHTGEKPFTCSQC-G 296

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           ++F + + L++HMR   G KPF C+ C + F + S L  H+R+     PF C  C K F 
Sbjct: 297 KSFSQSSSLNIHMRIHTGEKPFTCTQCGKSFSQSSSLNIHMRIHTGEKPFTCTQCGKSFN 356

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHV 448
             S L  H+K H   +P  C +C   F   + L  H 
Sbjct: 357 CSSLLNKHMKIHTGEKPFACTQCGRSFSHSSSLNRHT 393

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|443728181|gb|ELU14642.1| hypothetical protein CAPTEDRAFT_135345 [Capitella teleta]

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 159/398 (39%), Positives = 231/398 (58%), Gaps = 14/398 (3%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           + F C++C K +++K  L  H+R H           GE  F C  C KTF  K  L +H+
Sbjct: 63  RPFVCDVCQKTFSQKRALERHMRVH----------TGERPFECDVCQKTFSRKEVLEQHM 112

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           + H+  + F C+ C+  F  KR   RHM++H G + F C VC K F+ K    RH++ H 
Sbjct: 113 RVHTGKRPFECDVCQKVFSQKRILERHMRVHTGKRPFECDVCQKVFSQKKALERHVQVHT 172

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G +PF+C VC ++F Q+  L  H+R+H   RPF+C+VC   F+ K +L +H+R+H G +P
Sbjct: 173 GKRPFECDVCQKTFYQKRVLKRHMRVHTRKRPFECDVCQKTFSQKGNLKQHTRVHTGERP 232

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           F C +C K FS K  L+RHM++H G K + C +C K FTRK+ L  H R H G +PF C 
Sbjct: 233 FECDVCQKTFSHKGHLDRHMRLHTGEKPFECDVCQKTFTRKEVLEVHTRVHTGERPFECD 292

Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
           VC ++F+ K  L  HLR+HT  +P  C +C ++FS K +L  H++L  G  PF+CDVC +
Sbjct: 293 VCQKTFSNKVHLVQHLRVHTGERPFECDVCQKTFSHKGHLNRHIRLHTGEKPFECDVC-H 351

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
           +TF ++  L  HMR   G +PF+C +C   F  K  L  H+R+     PF+CD+C K F+
Sbjct: 352 KTFSRKEVLERHMRVHTGKRPFECDVCQMTFSHKGHLNRHVRLHTGEKPFECDVCHKTFS 411

Query: 415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVD 449
           +K  L  H++ H    P  CD C   F +K  L+ HV 
Sbjct: 412 RKEVLERHMRVHTGKRPFECDVCQMTFSQKKALERHVQ 449

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|326666983|ref|XP_003198441.1| PREDICTED: zinc finger protein 91-like [Danio rerio]

 Score =  315 bits (806), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 163/393 (41%), Positives = 221/393 (56%), Gaps = 14/393 (3%)

Query: 59  CNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHS 118
           C  C KR+ +K  L NH+  H           GE  + C++C KTF  K  L  H+++H+
Sbjct: 40  CTQCGKRFTQKTSLDNHMSIHT----------GEKPYRCTECGKTFPHKSSLKHHMRTHT 89

Query: 119 ENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKP 178
             K F C QC   F  K     HM IH G K F C+ C K+F      N+H++ H G KP
Sbjct: 90  GEKPFACTQCGKSFERKGYLKIHMMIHTGEKPFTCTQCGKSFNRSSSLNKHIKIHTGEKP 149

Query: 179 FQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
           F C+ C +SF Q S LN H++IH G +PF C  C   F   S LN H RIH G KPF C+
Sbjct: 150 FTCTQCGKSFNQSSYLNNHMKIHTGEKPFTCTQCGKSFNQSSYLNLHMRIHTGEKPFTCT 209

Query: 239 MCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFE 298
            C + F+R   LN+HMKIH   K + CT C K F R   LN HM+ H G KPF C+ C +
Sbjct: 210 QCGRSFNRSSSLNKHMKIHTEEKPFTCTQCFKSFNRSSHLNNHMKIHTGEKPFTCTQCGK 269

Query: 299 SFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFE 358
           SF+Q   LN H+RIHT  KP  C+ C +SF+Q S+L  H+K+  G  PF+C  C   +F 
Sbjct: 270 SFSQSTYLNKHMRIHTGEKPFTCTQCEKSFNQSSSLNKHMKIHTGEKPFRCTQC-GRSFN 328

Query: 359 KETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSN 418
           + + L+ HM    G KPF C+ C + F + S L +H+++     PF C +C K F++ S+
Sbjct: 329 QSSHLNSHMNIHTGEKPFTCTQCGKSFNQSSSLNKHIKIHTGEKPFTCTLCGKSFSQSSS 388

Query: 419 LRTHIKTH---EPIPCDKCPEIFEKKTDLQEHV 448
           L  H+KTH   +PI C +C E F +  +L EH+
Sbjct: 389 LNLHMKTHTGEKPITCTQCGESFNRSANLNEHM 421

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	617
ZFIN|ZDB-GENE-110913-38	987	si:ch211-208f21.5 "si:ch211-20	0.670	0.419	0.387	3.6e-89
ZFIN|ZDB-GENE-110913-121	898	si:ch211-162i8.3 "si:ch211-162	0.620	0.426	0.408	5.3e-88
ZFIN|ZDB-GENE-120703-37	911	si:dkey-78o7.1 "si:dkey-78o7.1	0.617	0.418	0.425	8.6e-88
ZFIN|ZDB-GENE-110913-145	656	si:ch211-209n20.58 "si:ch211-2	0.620	0.583	0.405	2.3e-87
ZFIN|ZDB-GENE-110913-163	485	si:ch211-209p16.2 "si:ch211-20	0.622	0.791	0.413	3.7e-87
ZFIN|ZDB-GENE-110913-140	485	si:dkey-54i3.4 "si:dkey-54i3.4	0.622	0.791	0.408	7.7e-87
ZFIN|ZDB-GENE-110913-133	485	si:dkey-222o15.5 "si:dkey-222o	0.622	0.791	0.403	9.9e-87
ZFIN|ZDB-GENE-110913-176	797	si:dkey-238o14.5 "si:dkey-238o	0.531	0.411	0.397	1.8e-74
ZFIN|ZDB-GENE-110913-92	548	si:ch211-271g18.3 "si:ch211-27	0.623	0.702	0.4	1.6e-86
ZFIN|ZDB-GENE-110913-160	846	si:dkey-29p23.3 "si:dkey-29p23	0.620	0.452	0.387	1.8e-85

ZFIN|ZDB-GENE-110913-38 si:ch211-208f21.5 "si:ch211-208f21.5" [Danio rerio (taxid:7955)]

 Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
 Identities = 170/439 (38%), Positives = 237/439 (53%)

Query:    55 KKFKCNICPKRYARKNRLTNHLRTHEAXXXXXXXXXXXXXFTCSQCPKTFVDKWHLNRHL 114
             K F C  C K + + + L  H+R H               FTC++C K+F    HL +H+
Sbjct:   539 KPFTCTKCGKSFNQSSYLNKHMRIHTGKRS----------FTCTRCGKSFTHSSHLKKHM 588

Query:   115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
             K+H+   +++C +C      K +   HM+IH+ VK+F C+ C K+F++    N+HMR H 
Sbjct:   589 KNHTAETLYQCSECGKSLANKSKLKIHMRIHNRVKLFTCTQCGKSFSNSANLNQHMRIHT 648

Query:   175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
             G KPF C+ C +SF+Q SNLN+H+RIH G +PF C+ C   F+  S LN H RIH G KP
Sbjct:   649 GEKPFTCTQCGKSFSQSSNLNLHMRIHTGEKPFTCSQCGKSFSQSSSLNLHMRIHTGEKP 708

Query:   235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
             F C+ C K FS+   LN HM+ H G K + C  C K F++   LN+HMR H G   F C+
Sbjct:   709 FTCTQCGKSFSQSSILNIHMRNHTGEKPFTCLQCGKSFSQSTYLNQHMRIHTGENLFTCT 768

Query:   295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
              C +SF+  A LN+H+RIHT  KP  C+ C +SFSQ SNL IH+++  G  PF C  C  
Sbjct:   769 QCGKSFSNSANLNLHMRIHTGEKPFTCTQCGKSFSQSSNLNIHMRIHTGEKPFTCSQC-G 827

Query:   355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
             ++F +   L+ HMR   G KPF CS C + F K S L  H+R+     PF C  C   F+
Sbjct:   828 KSFSQSPYLNHHMRIHTGEKPFTCSQCGKSFSKSSNLNIHMRIHTGEKPFTCTQCGTSFS 887

Query:   415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVD-----------KCHNLHXXXXX 460
             + SNL  H++ H   +P  C +C + F + T L  H+            KC N       
Sbjct:   888 QSSNLNIHMRNHTGEKPFTCLQCGKSFSRSTSLNRHMMIHTGEKEFMCLKCENTFITAAE 947

Query:   461 XXXXXXXAPKEKSFNCSKC 479
                       EK + CS+C
Sbjct:   948 LKRHQRVHTGEKPYKCSQC 966

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-121 si:ch211-162i8.3 "si:ch211-162i8.3" [Danio rerio (taxid:7955)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 162/397 (40%), Positives = 226/397 (56%)

Query:    55 KKFKCNICPKRYARKNRLTNHLRTHEAXXXXXXXXXXXXXFTCSQCPKTFVDKWHLNRHL 114
             K FKC  C K +++ + L +H R H               FTC+QC K+F    +LN+H+
Sbjct:   177 KPFKCTQCGKSFSQSSHLKHHTRIHSGEKP----------FTCTQCWKSFSRSSYLNQHM 226

Query:   115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
             + H+  K F C QC   F     +N HM+IH G K+F C+ C K+F+    FN+HMR H 
Sbjct:   227 RIHTGEKPFTCTQCGKSFSQSSHFNYHMRIHTGDKLFTCTQCGKSFSCSSSFNQHMRIHT 286

Query:   175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
             G+KPF C  C +SF++ SN  +H+ IH G +PF+C  C   F+  S L  H+RIH+G KP
Sbjct:   287 GVKPFTCLQCGKSFSKSSNFILHMMIHTGEKPFKCTQCGKSFSQSSHLKHHTRIHSGEKP 346

Query:   235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
             F C+ C K FSR   LN+HM+IH G K + CT C K F++   LN HMR H G KPF C+
Sbjct:   347 FTCTQCGKSFSRSSYLNQHMRIHTGEKPFTCTQCGKSFSQSSHLNHHMRIHTGEKPFTCT 406

Query:   295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
              C +SF+Q +  N H+RIHT  K   C+ C +SFS  S+   H+++  GV PF C  C  
Sbjct:   407 QCGKSFSQSSHFNYHMRIHTGDKLFTCTQCGKSFSCSSSFNQHMRIHTGVKPFTCLQC-G 465

Query:   355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
             ++F K +   LHM    G KPFKC+ C + F + S LK H R+     PF C  C K F+
Sbjct:   466 KSFSKSSNFILHMMIHTGEKPFKCTQCGKSFSQSSHLKHHTRIHSGEKPFTCTQCGKSFS 525

Query:   415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHV 448
             + S L  H++ H   +P  C +C + F + + L  H+
Sbjct:   526 RSSYLNQHMRIHTGEKPFTCTQCGKSFSQSSHLNHHM 562

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-120703-37 si:dkey-78o7.1 "si:dkey-78o7.1" [Danio rerio (taxid:7955)]

 Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
 Identities = 168/395 (42%), Positives = 220/395 (55%)

Query:    57 FKCNICPKRYARKNRLTNHLRTHEAXXXXXXXXXXXXXFTCSQCPKTFVDKWHLNRHLKS 116
             F CN C K  A K++L  H+R H               FTC+QC K F    HLN+H++ 
Sbjct:   349 FTCNQCGKSLANKSKLKIHMRVHNREKL----------FTCTQCGKNFNQSSHLNQHMRI 398

Query:   117 HSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGI 176
             H+  K F C QC   F      N+HM+IH G K F C+ C K+F++    N+HMR H G 
Sbjct:   399 HTGEKPFTCTQCGKSFSYSANLNQHMRIHTGEKPFTCTQCGKSFSNSANLNQHMRIHTGE 458

Query:   177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFL 236
             KPF C+ C +SF+Q S LN H+RIH G +PF C+ C   F+    LN+H RIH G KPF 
Sbjct:   459 KPFTCTQCGKSFSQSSYLNQHMRIHTGEKPFTCSQCGKSFSQSPYLNQHMRIHTGEKPFT 518

Query:   237 CSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVC 296
             CS C K FS+   L  HM+IH G K + CT C K F++  +LN HMRNH G KPF C  C
Sbjct:   519 CSQCGKSFSQSSSLYLHMRIHTGEKPFTCTQCGKSFSKSSNLNIHMRNHTGEKPFTCLQC 578

Query:   297 FESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNET 356
              +SF+Q   LN+H+RIHT  KP  C+ C +SFSQ SN  IH++   G  PF C  C  ++
Sbjct:   579 GKSFSQSTSLNLHMRIHTGEKPFTCTQCGKSFSQSSNPNIHMRNHIGEKPFTCTQC-EKS 637

Query:   357 FEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKK 416
             F + T L+  M    G K F C  C+  F   + LK H RV     P+KC  C K FT+ 
Sbjct:   638 FSQSTSLNRQMMIHTGEKEFMCLKCENTFITAAELKRHQRVHTGEKPYKCSQCSKRFTRS 697

Query:   417 SNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHV 448
               L+TH + H   +P  C +C + F    +L  H+
Sbjct:   698 GTLKTHERIHTGEKPCTCKQCGKSFYTIGNLTVHM 732

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-145 si:ch211-209n20.58 "si:ch211-209n20.58" [Danio rerio (taxid:7955)]

 Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
 Identities = 161/397 (40%), Positives = 225/397 (56%)

Query:    55 KKFKCNICPKRYARKNRLTNHLRTHEAXXXXXXXXXXXXXFTCSQCPKTFVDKWHLNRHL 114
             K   C  C K +++ + L  H++ H               FTC+QC K+F D  +L +H+
Sbjct:   148 KPLTCPQCGKSFSKSSSLYKHMKIHTGEKP----------FTCTQCGKSFYDSSYLKKHM 197

Query:   115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
             + H+  K F C QC   F       +HM IH G K F C+ C K+F+      RHMR H 
Sbjct:   198 RIHTGEKPFTCAQCGKSFNCSSHLKKHMMIHTGEKPFTCTQCGKSFSKSSSLYRHMRIHT 257

Query:   175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
             G KPF C+ C +SF+  S+LN H+ IH G +PF C  C   F + S+LN H RIH G KP
Sbjct:   258 GEKPFTCTQCGKSFSHSSSLNQHMMIHTGEKPFTCPQCGKSFIHSSNLNLHMRIHTGEKP 317

Query:   235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
             F CS C K FS    L +HMKIH G K + CT C K F++   L RHM+ H G KPF C+
Sbjct:   318 FTCSQCGKSFSTSSHLKQHMKIHTGEKPFTCTQCGKSFSKSSSLYRHMKIHTGEKPFICT 377

Query:   295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
             +C +SF+Q + LN+H+RIHT  KP  C+ C +SF+Q SNLY+H+++  G  PF C  C  
Sbjct:   378 LCGKSFSQSSSLNLHMRIHTGEKPFTCTQCGKSFNQSSNLYLHMRIHTGEKPFTCTQC-G 436

Query:   355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
             ++F + + L+LHMR   G KPF C++C + F   S L +H+ +     PF C  C K F 
Sbjct:   437 KSFRQSSSLNLHMRIHTGEKPFTCTLCGKNFIHSSHLNQHMMIHTGEKPFTCTQCGKSFR 496

Query:   415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHV 448
               S+L  H+ TH   +P  C +C + F + + L +H+
Sbjct:   497 ISSSLCRHMMTHTIEKPFTCTQCGKSFSQSSYLNKHM 533

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-163 si:ch211-209p16.2 "si:ch211-209p16.2" [Danio rerio (taxid:7955)]

 Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
 Identities = 165/399 (41%), Positives = 222/399 (55%)

Query:    95 FTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
             FTCSQC K+  +K  L  H++ H+  K+F C QC  +F      N+HM+IH G K+F C+
Sbjct:    66 FTCSQCGKSLANKSKLKIHMRIHNREKLFTCTQCGKNFNQSSNLNQHMRIHTGEKLFTCT 125

Query:   155 VCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYI 214
              C K+F++    N+HMR H G KPF C+ C +SF+Q SNLN H+RIH G +PF C+ C  
Sbjct:   126 QCGKSFSNSTNLNQHMRIHTGEKPFTCTQCGKSFSQSSNLNHHMRIHTGEKPFTCSQCGK 185

Query:   215 CFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTR 274
              F+  S LN H  IH G KPF C+ C K FS+   LN HM+ H G K + C  C K F++
Sbjct:   186 SFSQSSSLNLHMMIHTGEKPFTCTQCGKSFSQSSILNIHMRNHTGEKPFTCLQCGKSFSQ 245

Query:   275 KDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNL 334
                LN+HMR H G K F C+ C +SF+  A LN H+RIHT  KP  C+ C +SFSQ SNL
Sbjct:   246 STSLNQHMRIHTGEKLFTCTQCGKSFSNSANLNQHMRIHTGEKPFTCTQCGKSFSQSSNL 305

Query:   335 YIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEH 394
              IH+++  G  PF C  C  ++F +   L+ HMR   G KPF CS C + F + S L  H
Sbjct:   306 NIHMRIHTGEKPFTCSQC-GKSFSQSPYLNHHMRIHTGEKPFTCSQCGKSFSQSSSLNLH 364

Query:   395 LRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVD-- 449
             +R+     PF C  C K F++ SNL  H++ H   +P  C +C + F + T L  H+   
Sbjct:   365 MRIHTGEKPFTCTQCGKSFSQSSNLNIHMRNHTGEKPFTCLQCGKSFSQSTSLNRHMMIH 424

Query:   450 ---------KCHNLHXXXXXXXXXXXXAPKEKSFNCSKC 479
                      KC N                 EK + CS+C
Sbjct:   425 TGEKEFMCLKCENTFITAAELKRHQRVHTGEKPYKCSQC 463

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-140 si:dkey-54i3.4 "si:dkey-54i3.4" [Danio rerio (taxid:7955)]

 Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
 Identities = 163/399 (40%), Positives = 223/399 (55%)

Query:    95 FTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
             FTC+QC K+  +K  L  H++ H+  K+F C QC  +F      N+HM+IH G K+F C+
Sbjct:    66 FTCNQCGKSLANKSKLKIHMRIHNREKLFTCTQCGKNFNQSSNLNQHMRIHTGEKLFTCT 125

Query:   155 VCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYI 214
              C K+F++    N+HMR H G KPF C+ C +SF+Q SNLN H+RIH G +PF C+ C  
Sbjct:   126 QCGKSFSNSANLNQHMRIHTGEKPFTCTQCGKSFSQSSNLNHHMRIHTGEKPFTCSQCGK 185

Query:   215 CFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTR 274
              F+  S LN H RIH G KPF C+ C K FS+   LN HM+ H G K + C  C K F++
Sbjct:   186 SFSQSSSLNLHMRIHTGEKPFTCTQCGKSFSQSSILNIHMRNHTGEKPFTCLQCGKSFSQ 245

Query:   275 KDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNL 334
                LN+HMR H G   F C+ C +SF+  A LN+H+RIHT  KP  C+ C +SFSQ SNL
Sbjct:   246 STYLNQHMRIHTGENLFTCTQCGKSFSNSANLNLHMRIHTGEKPFTCTQCGKSFSQSSNL 305

Query:   335 YIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEH 394
              IH+++  G  PF C  C  ++F +   L+ HMR   G KPF CS C + F + S L  H
Sbjct:   306 NIHMRIHTGEKPFTCSQC-GKSFSQSPYLNHHMRIHTGEKPFTCSQCGKSFSQSSSLNLH 364

Query:   395 LRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVD-- 449
             +R+     PF C  C K F++ SNL  H++ H   +P  C +C + F + + L  H+   
Sbjct:   365 MRIHTGEKPFTCTQCGKSFSQSSNLNIHMRNHTGEKPFTCLQCGKSFSRSSSLNRHMMIH 424

Query:   450 ---------KCHNLHXXXXXXXXXXXXAPKEKSFNCSKC 479
                      KC N                 EK + CS+C
Sbjct:   425 TGEKEFMCLKCENTFITAAELKRHQRVHTGEKPYKCSQC 463

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-133 si:dkey-222o15.5 "si:dkey-222o15.5" [Danio rerio (taxid:7955)]

 Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
 Identities = 161/399 (40%), Positives = 219/399 (54%)

Query:    95 FTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
             FTC+QC K+  +K  L  H++ H+  K+F C QC  +F      N+HM+IH G K F C+
Sbjct:    66 FTCNQCGKSLANKSKLKIHMRIHNREKLFTCTQCGKNFNQSSHLNQHMRIHTGEKPFTCT 125

Query:   155 VCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYI 214
              C K+F++    N+HMR H G KPF C+ C +SF+Q S LNIH+RIH G +PF C  C  
Sbjct:   126 QCGKSFSNSANLNQHMRIHTGEKPFTCTQCGKSFSQSSYLNIHMRIHTGEKPFTCPQCGK 185

Query:   215 CFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTR 274
              F+    LN+H RIH G KPF CS C K FS+   LN H++IH G K + CT C K F +
Sbjct:   186 SFSQSQYLNQHMRIHTGEKPFTCSQCGKSFSQSSSLNLHIRIHTGEKPFTCTQCGKSFNK 245

Query:   275 KDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNL 334
                LN HMRNH G KPF C  C +SF+Q   LN H+RIHT  K   C+ C +SFS  +NL
Sbjct:   246 SSILNIHMRNHTGEKPFTCLQCGKSFSQSTSLNQHMRIHTGEKLFTCTQCGKSFSNSANL 305

Query:   335 YIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEH 394
               H+++  G  PF C  C  ++F + + L++HMR   G KPF C  C + F +   L  H
Sbjct:   306 NQHMRIHTGEKPFTCSQC-GKSFSQSSYLNIHMRIHTGEKPFTCPQCGKSFSQSPYLNHH 364

Query:   395 LRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVD-- 449
             +R+     PF C  C K F++ SNL  H++ H   +P  C +C + F + T L  H+   
Sbjct:   365 MRIHTGEKPFTCTQCGKSFSQSSNLNIHMRNHSGEKPFTCTQCEKSFSQSTSLNRHMMIH 424

Query:   450 ---------KCHNLHXXXXXXXXXXXXAPKEKSFNCSKC 479
                      KC                   EK++ CS+C
Sbjct:   425 TGEKEFMCLKCEKTFITAAELKRHQRVHTGEKTYKCSQC 463

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-176 si:dkey-238o14.5 "si:dkey-238o14.5" [Danio rerio (taxid:7955)]

 Score = 672 (241.6 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
 Identities = 135/340 (39%), Positives = 183/340 (53%)

Query:   111 NRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHM 170
             N  LK  ++N+ F C QC   F      NRHM+IH G K F C+ C K+F      NRHM
Sbjct:   467 NIFLKRRNKNR-FTCTQCGKSFNCSSSLNRHMRIHTGEKPFTCTQCGKSFNCSSSLNRHM 525

Query:   171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHN 230
             R H G KPF C+ C +SF   S+LN H+ IH G +PF C  C   F+  S L++H RIH 
Sbjct:   526 RIHTGEKPFTCTQCGKSFNCSSSLNRHMMIHTGEKPFTCTQCGKSFSQSSHLDKHMRIHT 585

Query:   231 GIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
               +PF C+ C K F R   LN HM+IH G K + CT C + F++   LN+HMR H G KP
Sbjct:   586 EERPFTCTQCGKSFIRSSYLNLHMRIHTGEKPFTCTQCGRSFSQSSHLNQHMRIHTGEKP 645

Query:   291 FHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
             F C+ C +SF     L+ H+RIHT  KP  C  C ++FS  ++L  H++   G   F C 
Sbjct:   646 FACTQCRKSFYCSFSLSRHMRIHTGEKPFTCPQCGKNFSLSTSLNYHMRNHTGETSFTC- 704

Query:   351 VCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICF 410
               P +TF K      HM+T  G KPF  + C + F +   L EH+++   V  + C  C 
Sbjct:   705 TDP-QTFIK------HMKTHTGGKPFTSTQCGKSFNQSPNLNEHMKIHTGVKEYMCFECE 757

Query:   411 KLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
             K F    NL+T  + H   +P   D+C + F     L++H
Sbjct:   758 KTFITAPNLKTQKRIHTGEKPYRSDQCLQSFTHSAQLKKH 797

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-92 si:ch211-271g18.3 "si:ch211-271g18.3" [Danio rerio (taxid:7955)]

 Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
 Identities = 160/400 (40%), Positives = 218/400 (54%)

Query:    56 KFKCNICPKRYARKNRLTNHLRTHEAXXXXXXXXXXXXXFTCSQCPKTFVDKWHLNRHLK 115
             +F C  C K + RK  L  H+  H               FTC+QC K+F     LN+H+K
Sbjct:    65 RFTCTQCGKSFGRKGYLKIHMMIHTGEKP----------FTCTQCGKSFNRSSSLNKHIK 114

Query:   116 SHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG 175
              H+  K F C QC   F      N H+KIH G K F C+ C K+F      N HM+ H G
Sbjct:   115 IHTGEKPFTCTQCGKSFNQSSSLNNHIKIHTGEKPFTCTQCGKSFNQSSSLNNHMKIHTG 174

Query:   176 IKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
              KPF C+ C +SF Q S LN+H+RIH G +PF C  C   F   S +N+H +IH G KPF
Sbjct:   175 EKPFTCTQCGKSFNQSSYLNLHMRIHTGEKPFTCTQCGRSFNRSSSINKHMKIHTGEKPF 234

Query:   236 LCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV 295
              C+ C K F+R   LN HMKIH G K + CT C K F++   LN+HMR H G KPF C+ 
Sbjct:   235 TCTQCLKSFNRSSHLNNHMKIHTGEKPFTCTQCGKSFSQSTYLNKHMRIHTGEKPFTCTQ 294

Query:   296 CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNE 355
             C +SF Q + LN H++IHT  KP  C+ C  SF+Q S+L  H+ +  G  PF C  C  +
Sbjct:   295 CEKSFNQSSSLNKHMKIHTGEKPFTCTQCGRSFNQSSHLNSHMNIHTGEKPFTCTQC-GK 353

Query:   356 TFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTK 415
             +F + + L+ H++   G KPF C+ C + F + S L  H+++     PF C  C K F +
Sbjct:   354 SFNQSSSLNKHIKIHTGEKPFTCTQCGKSFNQSSSLNNHMKIHTGEKPFTCTQCGKSFNQ 413

Query:   416 KSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVDKCH 452
              S L  H++ H   +P  C +C   F + + L +H+ K H
Sbjct:   414 SSYLNLHMRIHTGEKPFTCTQCGRSFNRSSSLNKHM-KIH 452

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-160 si:dkey-29p23.3 "si:dkey-29p23.3" [Danio rerio (taxid:7955)]

 Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
 Identities = 154/397 (38%), Positives = 221/397 (55%)

Query:    55 KKFKCNICPKRYARKNRLTNHLRTHEAXXXXXXXXXXXXXFTCSQCPKTFVDKWHLNRHL 114
             K F C  C   +   + L  H+R H               FTC+QC ++F    HLN H+
Sbjct:   338 KPFTCTQCGISFNCSSYLKQHMRIHTGEKP----------FTCTQCGRSFNRLSHLNHHM 387

Query:   115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
             + H+  K F C QC   F      ++H++IH G K   C+ C K+F       +HMR H 
Sbjct:   388 RIHTGEKPFTCTQCWKSFNRSSHLDQHIRIHTGEKPITCTQCGKSFRQSSSLYKHMRIHT 447

Query:   175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
             G KPF C+ C +SF+Q S+ N+H+RIH G++PF C  C   F   S LN+H R H G KP
Sbjct:   448 GEKPFTCTQCGKSFSQSSSFNLHMRIHTGVKPFTCTQCGKSFRQASSLNKHMRTHTGEKP 507

Query:   235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
             F C+ C K F+R   LN+H++IH G K   CT C K F +   LN+HMR H G KPF C+
Sbjct:   508 FTCTQCGKSFNRSSTLNQHIRIHTGEKPITCTQCGKSFRQASSLNKHMRIHTGEKPFTCT 567

Query:   295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN 354
              C +SF+Q +  N+H+RIHT  KP  C+ C +SF Q SN  +H+++  G  PF C  C  
Sbjct:   568 QCGKSFSQSSNFNLHMRIHTGEKPFTCTQCGKSFIQSSNFNLHMRIHTGEKPFTCTQC-G 626

Query:   355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFT 414
             ++F + + L+ HMRT  G KPF C+ C + F + S L +H+R+     PF C  C + F 
Sbjct:   627 KSFRQASSLNKHMRTHTGEKPFTCTQCGKSFNRSSRLDQHIRIHTREKPFTCTECGRSFN 686

Query:   415 KKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHV 448
             + S+L  H++ H   +P  C +C + F + + L +H+
Sbjct:   687 RSSHLNHHMRIHTGEKPFTCTQCGKSFNRSSTLNQHI 723

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.3.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	617
COG2423	330	COG2423, COG2423, Predicted ornithine cyclodeamina	4e-16
pfam02423	313	pfam02423, OCD_Mu_crystall, Ornithine cyclodeamina	6e-16
PRK08618	325	PRK08618, PRK08618, ornithine cyclodeaminase; Vali	4e-12
TIGR02371	325	TIGR02371, ala_DH_arch, alanine dehydrogenase, Arc	8e-11
PRK06046	326	PRK06046, PRK06046, alanine dehydrogenase; Validat	1e-10
PRK08291	330	PRK08291, PRK08291, ectoine utilization protein Eu	8e-10
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	3e-09
PRK06141	314	PRK06141, PRK06141, ornithine cyclodeaminase; Vali	6e-08
TIGR02992	326	TIGR02992, ectoine_eutC, ectoine utilization prote	7e-07
PRK07340	304	PRK07340, PRK07340, ornithine cyclodeaminase; Vali	4e-06
PRK06823	315	PRK06823, PRK06823, ornithine cyclodeaminase; Vali	5e-06
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	9e-06
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	3e-05
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	5e-05
PRK06407	301	PRK06407, PRK06407, ornithine cyclodeaminase; Prov	7e-05
PRK07589	346	PRK07589, PRK07589, ornithine cyclodeaminase; Vali	2e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.002

>gnl|CDD|225280 COG2423, COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

 Score = 79.7 bits (197), Expect = 4e-16
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 11/136 (8%)

Query: 490 KSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG 549
           ++   +L   G  AV A +  E+A   ADI+VTAT S+ PVLK EWL K   HINA+GA 
Sbjct: 169 EAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWL-KPGTHINAIGAD 227

Query: 550 LNHHSELDAAIYSHS-SIFFDSEAAAR---GELKGLYEQ---VPANMVGEVGGLIAANL- 601
                ELD  + + +  +  DS    R   GE+          P  +V E+G ++A  + 
Sbjct: 228 APGKRELDPEVLARADRVVVDSLEQTRKESGEISQAVAAGVLSPDAIVAELGDVVAGKIP 287

Query: 602 -TRDARYPLTVFHSMG 616
                    T+F S+G
Sbjct: 288 GRESDDEI-TLFDSVG 302

Length = 330

>gnl|CDD|217026 pfam02423, OCD_Mu_crystall, Ornithine cyclodeaminase/mu-crystallin family

 Score = 78.6 bits (194), Expect = 6e-16
 Identities = 47/139 (33%), Positives = 61/139 (43%), Gaps = 13/139 (9%)

Query: 484 RIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYS-SVPVLKYEWLKKKDAH 542
           R P   +     L   G   + A    E+A   ADI+VT T     P+LK EW+K    H
Sbjct: 162 RDPEAAEKFARNLQEPGFE-IVACTSAEEAVEGADIVVTVTPDKEFPILKAEWVKP-GVH 219

Query: 543 INAVGAGLNHHSELDAAIYSHSSIFFDSEAAAR--GELKGLYEQVPANMVGEVGGLIAAN 600
           INAVGA     +ELD  I   + IF D    AR  GE   + +      V E+G +I   
Sbjct: 220 INAVGADCPGKTELDPDILLRADIFVDYPPQARIEGE---IQQLPDDAPVPELGDVITGK 276

Query: 601 L---TRDARYPLTVFHSMG 616
               T D    +T+F S G
Sbjct: 277 KPGRTNDED--ITLFDSTG 293

This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyzes the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina. Length = 313

>gnl|CDD|236313 PRK08618, PRK08618, ornithine cyclodeaminase; Validated

 Score = 67.4 bits (165), Expect = 4e-12
 Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 15/128 (11%)

Query: 500 GVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDA- 558
                      ++A  +ADI+VT T +  PV   E L KK  HINAVG+ +    EL + 
Sbjct: 177 NTEIY-VVNSADEAIEEADIIVTVTNAKTPVFS-EKL-KKGVHINAVGSFMPDMQELPSE 233

Query: 559 AIYSHSSIFFDSEAAARGELKGLYEQVP-------ANMV-GEVGGLIAANLT-RDARYPL 609
           AI   + +  +S+ AA  E   L   VP        + + GE+G +I+  +  R++   +
Sbjct: 234 AIARANKVVVESKEAALEETGDL--IVPLKEGLISKDDIHGELGQIISGEIAGRESDEEI 291

Query: 610 TVFHSMGV 617
           TVF S+G+
Sbjct: 292 TVFKSVGL 299

Length = 325

>gnl|CDD|131424 TIGR02371, ala_DH_arch, alanine dehydrogenase, Archaeoglobus fulgidus type

 Score = 63.4 bits (154), Expect = 8e-11
 Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 18/148 (12%)

Query: 483 VRIPVEIKSLVEKLT---SEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKK 539
           V +     S  EK     S+    V+A     +A    DILVT T S  PV+K +W+  +
Sbjct: 156 VSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKPVVKADWV-SE 214

Query: 540 DAHINAVGAGLNHHSELDAAIYSHSSIFFDS--EAAARGEL-----KGLY--EQVPANMV 590
             HINA+GA      ELD  I  ++ IF D   +A   GE+     KG+   + + A++ 
Sbjct: 215 GTHINAIGADAPGKQELDPEILKNAKIFVDDLEQATHSGEINVPISKGIIRVDDLHASL- 273

Query: 591 GEV-GGLIAANLTRDARYPLTVFHSMGV 617
           GEV  GL      R +   +T+F S G+
Sbjct: 274 GEVITGLKEG---RTSPEEITIFDSTGL 298

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity. Length = 325

>gnl|CDD|180367 PRK06046, PRK06046, alanine dehydrogenase; Validated

 Score = 62.4 bits (152), Expect = 1e-10
 Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 14/145 (9%)

Query: 483 VRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDA---DILVTATYSSVPVLKYEWLKKK 539
           VR+    KS  EK        V       +   +A   DILVT T S  PV+K EW+ K+
Sbjct: 157 VRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACDCDILVTTTPSRKPVVKAEWI-KE 215

Query: 540 DAHINAVGAGLNHHSELDAAIYSHSSIFFDS--EAAARGEL-----KGLYEQVPANMVGE 592
             HINA+GA      ELD  I   + +  D   +A   GE+     KG+      ++   
Sbjct: 216 GTHINAIGADAPGKQELDPEILLRAKVVVDDMEQALHSGEINVPLSKGIIR--EEDIYAT 273

Query: 593 VGGLIAANLT-RDARYPLTVFHSMG 616
           +G +IA     R++   +T+F S G
Sbjct: 274 LGEVIAGKKPGRESDEEITIFDSTG 298

Length = 326

>gnl|CDD|236221 PRK08291, PRK08291, ectoine utilization protein EutC; Validated

 Score = 60.4 bits (147), Expect = 8e-10
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 484 RIPVEIKSLVEKLTSE-GVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAH 542
           R   + ++    L +E G+P V       +A   ADI+VT T S  P+LK EWL     H
Sbjct: 165 RDAAKAEAYAADLRAELGIP-VTVARDVHEAVAGADIIVTTTPSEEPILKAEWL-HPGLH 222

Query: 543 INAVGAGLNHHSELDAAIYSHSSIFF-DSEAAAR--GELKGLYEQ--VPANMV-GEVGGL 596
           + A+G+   H +E+  A+++ + ++  D  +  R  GEL        V A+ V  E+G +
Sbjct: 223 VTAMGSDAEHKNEIAPAVFAAADLYVCDRLSQTRRLGELHHAIAAGLVAADAVFPELGQV 282

Query: 597 IA 598
           IA
Sbjct: 283 IA 284

Length = 330

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 58.9 bits (142), Expect = 3e-09
 Identities = 71/421 (16%), Positives = 123/421 (29%), Gaps = 62/421 (14%)

Query: 57  FKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWHLNRHL 114
             C  C   ++R   LT H+R+H           GE    CS   C K+F     L+RHL
Sbjct: 34  DSCPNCTDSFSRLEHLTRHIRSHT----------GEKPSQCSYSGCDKSFSRPLELSRHL 83

Query: 115 KSHSENKVFRCEQCRFDFYVK-REYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
           ++H  N      +       K    +      +     L S  S   + +      + + 
Sbjct: 84  RTHHNNPSDLNSKSLPLSNSKASSSSLSSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSI 143

Query: 174 EGIKPFQCSVCSESFTQRSN----------------------LNIHLRIHDGIRPFQCNV 211
             ++       + S                            L I   +   I     N 
Sbjct: 144 SNLRNNPLPGNNSSSVNTPQSNSLHPPLPANSLSKDPSSNLSLLISSNVSTSIPSSSENS 203

Query: 212 CYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKC 271
                 +    +    + N       +  ++       L         S     +     
Sbjct: 204 PLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLS--PKSLLSQSPSSLSSSDSSSSASESP 261

Query: 272 FTRKDDLNRHMRNHDGL---------KPFHCSVCFESFTQKALLNIHLR--IHT--NSKP 318
            +     +    + +            P     C  SF++ + L  HLR   H+  + KP
Sbjct: 262 RSSLPTASSQSSSPNESDSSSEKGFSLPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKP 321

Query: 319 HAC--SICTESFSQKSNLYIHLKLQHGVNPFKCDVCPN------ETFEKETQLSLHMRTV 370
            +C  S+C + FS+   L  H+ L   ++P K  +  +          +  Q     + +
Sbjct: 322 FSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDL 381

Query: 371 HGVKPFKCSM--CDEGFPKKSVLKEHLRVSHNVNP--FKCDICFKLFTKKSNLRTHIKTH 426
              K  +     C   F + S L  H+    +  P   K   C K F +  NL  H K H
Sbjct: 382 KNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIH 441

Query: 427 E 427
            
Sbjct: 442 T 442

Length = 467

>gnl|CDD|180421 PRK06141, PRK06141, ornithine cyclodeaminase; Validated

 Score = 54.5 bits (132), Expect = 6e-08
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 484 RIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHI 543
           R P + ++L  +L ++G    +     E A R ADI+  AT S+ P+++ EWLK    H+
Sbjct: 158 RDPAKAEALAAELRAQG-FDAEVVTDLEAAVRQADIISCATLSTEPLVRGEWLKPG-THL 215

Query: 544 NAVGAGLNHH---SELDAAIYSHSSIFFDSEAAA 574
           + VG   N      E D      +S++ D+ A A
Sbjct: 216 DLVG---NFTPDMRECDDEAIRRASVYVDTRAGA 246

Length = 314

>gnl|CDD|132037 TIGR02992, ectoine_eutC, ectoine utilization protein EutC

 Score = 51.0 bits (122), Expect = 7e-07
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 503 AVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYS 562
            V A      A   ADI+VT T S  P+L  EWL +   H+ A+G+   H +E+D A+ +
Sbjct: 181 DVTAATDPRAAMSGADIIVTTTPSETPILHAEWL-EPGQHVTAMGSDAEHKNEIDPAVIA 239

Query: 563 HSSIFF-DSEAAAR--GEL 578
            +  +  D  +     GEL
Sbjct: 240 KADHYVADRLSQTATLGEL 258

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). Length = 326

>gnl|CDD|235996 PRK07340, PRK07340, ornithine cyclodeaminase; Validated

 Score = 48.8 bits (117), Expect = 4e-06
 Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 11/128 (8%)

Query: 492 LVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLN 551
                 + G  A      GE      D++VTAT S  PV  Y    +    + AVGA   
Sbjct: 166 FCAHARALGPTAEP--LDGEAIPEAVDLVVTATTSRTPV--YPEAARAGRLVVAVGAFTP 221

Query: 552 HHSELDAAIYSHSSIFFDSEAAAR---GELKGLYEQVPANMVGEVGGLIAANLTRDARYP 608
             +EL       S ++ D  A AR   G+L  +   V  + V  +   +          P
Sbjct: 222 DMAELAPRTVRGSRLYVDDPAGARHEAGDL--IQAGVDWSRVRPLADALRGAWPARGG-P 278

Query: 609 LTVFHSMG 616
           + +F S+G
Sbjct: 279 V-LFKSVG 285

Length = 304

>gnl|CDD|136070 PRK06823, PRK06823, ornithine cyclodeaminase; Validated

 Score = 48.6 bits (116), Expect = 5e-06
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 503 AVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYS 562
           AV       + A  A+++VT T S  P+L+ E + +   HI AVGA      ELDA + +
Sbjct: 179 AVNTTLDAAEVAHAANLIVTTTPSREPLLQAEDI-QPGTHITAVGADSPGKQELDAELVA 237

Query: 563 HSS-IFFDS--EAAARGELKGLYEQ--VPANMVGEVGGLIAANLT-RDARYPLTVFHSMG 616
            +  I  DS  +    GE+   ++   +  + + E+G  +A  +  R+    +T+    G
Sbjct: 238 RADKILVDSIAQCTDFGEVSHAFKAGLLAHHNLTELGLALAQGIPFRENDQQITLADLTG 297

Query: 617 V 617
           V
Sbjct: 298 V 298

Length = 315

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 48.2 bits (114), Expect = 9e-06
 Identities = 53/338 (15%), Positives = 90/338 (26%), Gaps = 71/338 (21%)

Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSD---LNRHSRIHNGIK 233
           +P  C  C++SF++  +L  H+R H G +P QC+    C  + S    L+RH R H+   
Sbjct: 32  RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYS-GCDKSFSRPLELSRHLRTHHNNP 90

Query: 234 PFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKC---------FTRKDDLNRHMRN 284
             L S            +        S      +                      ++RN
Sbjct: 91  SDLNSKSLP--LSNSKASSSSLSSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRN 148

Query: 285 HD----GLKPFHCSVCFESFTQK------------ALLNIHLRIHTNSKPHACSICTESF 328
           +          +                         L I   + T+    + +    S 
Sbjct: 149 NPLPGNNSSSVNTPQSNSLHPPLPANSLSKDPSSNLSLLISSNVSTSIPSSSENSPLSSS 208

Query: 329 SQKSNLYIHLKLQHGVNPFKCDVC----------PNETFEKETQLSLHMRTVHG------ 372
               +      L++  +                  + +    +  S              
Sbjct: 209 YSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTA 268

Query: 373 ------------------VKPFKCSMCDEGFPKKSVLKEHLR----VSHNVNPFKCDI-- 408
                               P K   C+  F + S L  HLR       ++ PF C    
Sbjct: 269 SSQSSSPNESDSSSEKGFSLPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSL 328

Query: 409 CFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQE 446
           C KLF++   L+ HI  H  I   K   +         
Sbjct: 329 CGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPL 366

Length = 467

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 46.2 bits (109), Expect = 3e-05
 Identities = 38/178 (21%), Positives = 59/178 (33%), Gaps = 17/178 (9%)

Query: 149 KVFLCSVCSKTFTDKVKFNRHMRAH----EGIKPFQC--SVCSESFTQRSNLNIHLRIHD 202
                  C+ +F+      RH+R+     E +KPF C  S+C + F++   L  H+ +H 
Sbjct: 288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHT 347

Query: 203 GIRPFQC--NVCYICFTNKSDLNRHSRIH-----NGIKPFLCSMCAKCFSRKDDLNR-HM 254
            I P +         F+   +      +         K       +   + K D N    
Sbjct: 348 SISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLH 407

Query: 255 KIHEGSKRYLCTMCPKC---FTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH 309
            I   S R      P C   F R  +L  H + H    P  CS+         L N  
Sbjct: 408 IITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHG 465

Length = 467

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 45.8 bits (108), Expect = 5e-05
 Identities = 49/240 (20%), Positives = 70/240 (29%), Gaps = 43/240 (17%)

Query: 190 QRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGI-KPFLCSMCAKCFSRKD 248
             S+L+            + ++      + S     S    G   P     C   FSR  
Sbjct: 244 SPSSLSSSDSSSSASESPRSSLPTASSQSSSPNESDSSSEKGFSLPIKSKQCNISFSRSS 303

Query: 249 DLNRHM--KIH--EGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQ 302
            L RH+    H  E  K + C    C K F+R D L RH+  H  + P    +   S   
Sbjct: 304 PLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKF 363

Query: 303 KALLNIHLR-------IHTNSKPHAC--SICTESFSQKSNLYIHLKLQHGVNPFKCDVCP 353
             LLN              N K      + C  +F + SNL +H  + H           
Sbjct: 364 SPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLH-IITHLSFRPYN---- 418

Query: 354 NETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLF 413
                                  K   C + F +   L  H ++  N  P  C I     
Sbjct: 419 ----------------------CKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFR 456

Length = 467

>gnl|CDD|180556 PRK06407, PRK06407, ornithine cyclodeaminase; Provisional

 Score = 44.9 bits (106), Expect = 7e-05
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 8/132 (6%)

Query: 490 KSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG 549
           ++  E+ + E    ++  ++ E A RDAD + + T S  P+   ++L   + H+N  G+ 
Sbjct: 156 RAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTPIFNRKYL-GDEYHVNLAGSN 214

Query: 550 LNHHSELDAAIYSHSSIF----FDSEAAARGELKGLYEQVPANMVGEVGGLIAANLTRDA 605
             +  E + ++ + + I      +       E+   Y +     V E+    A N    +
Sbjct: 215 YPNRREAEHSVLNDADIVVTEHMEQSLRESSEISE-YVKKGGKPV-ELKD-FAKNNGSYS 271

Query: 606 RYPLTVFHSMGV 617
               TVF SMG+
Sbjct: 272 GLRRTVFKSMGI 283

Length = 301

>gnl|CDD|236064 PRK07589, PRK07589, ornithine cyclodeaminase; Validated

 Score = 43.7 bits (104), Expect = 2e-04
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 17/115 (14%)

Query: 511 EDAARDADILVTAT----YSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSI 566
            +A   ADI+ T T     ++  +L  + + +   HINAVG      +EL   I   + +
Sbjct: 188 AEAVEGADIITTVTADKTNAT--ILTDDMV-EPGMHINAVGGDCPGKTELHPDILRRARV 244

Query: 567 FFDSEAAAR--GELKGLYEQVPANM-VGEVGGLIAANLT--RDARYPLTVFHSMG 616
           F + E   R  GE+    +Q+PA+  V E+  ++         A   +T+F S+G
Sbjct: 245 FVEYEPQTRIEGEI----QQLPADFPVTELWRVLTGEAPGRESAD-QITLFDSVG 294

Length = 346

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 14/26 (53%), Positives = 18/26 (69%)

Query: 277 DLNRHMRNHDGLKPFHCSVCFESFTQ 302
           +L RHMR H G KP+ C VC +SF+ 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	617
KOG1074|consensus	958		99.95
KOG1074|consensus	958		99.95
KOG3608|consensus	467		99.95
KOG3608|consensus	467		99.95
KOG2462|consensus	279		99.93
KOG2462|consensus	279		99.93
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	99.93
PRK06407	301	ornithine cyclodeaminase; Provisional	99.89
PRK06823	315	ornithine cyclodeaminase; Validated	99.89
KOG3623|consensus	1007		99.88
KOG3623|consensus	1007		99.88
PRK07589	346	ornithine cyclodeaminase; Validated	99.88
KOG3007|consensus	333		99.87
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	99.86
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	99.86
PRK07340	304	ornithine cyclodeaminase; Validated	99.85
PRK06046	326	alanine dehydrogenase; Validated	99.84
PRK08618	325	ornithine cyclodeaminase; Validated	99.83
PRK06141	314	ornithine cyclodeaminase; Validated	99.79
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	99.79
PRK08291	330	ectoine utilization protein EutC; Validated	99.78
PRK06199	379	ornithine cyclodeaminase; Validated	99.71
KOG3576|consensus	267		99.67
KOG3576|consensus	267		99.66
PLN03086	567	PRLI-interacting factor K; Provisional	99.26
PLN03086	567	PRLI-interacting factor K; Provisional	99.23
PHA00733	128	hypothetical protein	99.09
PHA00733	128	hypothetical protein	99.04
KOG3993|consensus	500		98.83
PHA02768	55	hypothetical protein; Provisional	98.82
KOG3993|consensus	500		98.81
PHA02768	55	hypothetical protein; Provisional	98.75
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.44
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.38
KOG1146|consensus	1406		98.37
PHA00732	79	hypothetical protein	98.3
PHA00616	44	hypothetical protein	98.24
PHA00616	44	hypothetical protein	98.18
PHA00732	79	hypothetical protein	98.17
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	98.05
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.81
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.8
KOG1146|consensus	1406		97.7
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.57
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.41
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.37
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.36
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.23
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.21
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.13
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.08
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.02
KOG2231|consensus	669		97.01
KOG2231|consensus	669		97.01
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.0
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.55
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.24
smart00355	26	ZnF_C2H2 zinc finger.	96.14
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.1
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.85
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.84
smart00355	26	ZnF_C2H2 zinc finger.	95.84
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.79
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.64
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.64
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.62
KOG2785|consensus	390		95.4
KOG2482|consensus	423		95.4
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.32
PRK04860	160	hypothetical protein; Provisional	95.11
PRK04860	160	hypothetical protein; Provisional	94.89
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	94.85
COG5048	467	FOG: Zn-finger [General function prediction only]	94.74
COG5048	467	FOG: Zn-finger [General function prediction only]	94.72
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.67
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.28
KOG2482|consensus	423		93.5
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	92.35
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	91.93
KOG4173|consensus	253		91.83
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.71
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.2
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	91.05
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.22
KOG2785|consensus	390		89.71
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	89.56
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	89.47
KOG4173|consensus	253		89.39
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.07
KOG2893|consensus	341		88.95
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.94
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	88.92
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.66
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.73
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.56
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.35
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.61
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.24
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.93
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.73
PLN00203	519	glutamyl-tRNA reductase	85.72
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.69
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	85.37
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.26
KOG4230|consensus	935		85.18
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	84.99
KOG2893|consensus	341		84.99
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	84.9
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	84.88
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	84.69
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	84.15
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	84.15
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	84.07
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	83.86
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	83.45
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	82.97
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	82.88
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.85
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.67
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.67
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.58
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.57
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.38
COG4049	65	Uncharacterized protein containing archaeal-type C	81.57
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	81.54
PRK13940	414	glutamyl-tRNA reductase; Provisional	81.44
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	80.69
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	80.07

>KOG1074|consensus

Probab=99.95  E-value=5.3e-30  Score=262.88  Aligned_cols=193  Identities=24%  Similarity=0.550  Sum_probs=147.6

Q ss_pred             ceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCC----CccCC---ccccccCChhhH
Q psy13389        262 RYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSK----PHACS---ICTESFSQKSNL  334 (617)
Q Consensus       262 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----~~~C~---~C~~~f~~~~~l  334 (617)
                      +-.|-+|.++..-++.|+.|+++|+|++||+|.+||+.|.++.+|+.|+-+|...-    ++.|+   +|.+.|.+.-.|
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            46799999999999999999999999999999999999999999999998886543    47799   899999999999


Q ss_pred             HHHHhhhcCCC-------------CccCCCCCCCccCChhHHHHHhhhc----------------cCCC----CcccCcc
Q psy13389        335 YIHLKLQHGVN-------------PFKCDVCPNETFEKETQLSLHMRTV----------------HGVK----PFKCSMC  381 (617)
Q Consensus       335 ~~H~~~h~~~~-------------~~~C~~C~~~~f~~~~~l~~H~~~h----------------~~~~----~~~C~~C  381 (617)
                      ..|+++|.+..             .-+|..|.+ .|.....+..++..|                ..+.    +..+..|
T Consensus       685 pQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk-~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~  763 (958)
T KOG1074|consen  685 PQHIRIHLGGQISNGGTAAEGILAADQCSSCQK-TFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSC  763 (958)
T ss_pred             cceEEeecCCCCCCCcccccccchhcccchhhh-cccccccchhhhhccCCcccCCcccccccccccccccCCCcccccc
Confidence            99999887421             135777776 565555555554443                2222    4667777


Q ss_pred             CCcCCCchhHHHHhhhh-----------------------cCCC------------------------------------
Q psy13389        382 DEGFPKKSVLKEHLRVS-----------------------HNVN------------------------------------  402 (617)
Q Consensus       382 ~~~f~~~~~l~~H~~~h-----------------------~~~~------------------------------------  402 (617)
                      +..+.....+..+-..+                       ++++                                    
T Consensus       764 ~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t  843 (958)
T KOG1074|consen  764 GRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLAT  843 (958)
T ss_pred             ccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccc
Confidence            77777665554442211                       0000                                    


Q ss_pred             -----------------------------------ccccccccccccChHhHHHHHHcCC---CCCCccccccccCchhH
Q psy13389        403 -----------------------------------PFKCDICFKLFTKKSNLRTHIKTHE---PIPCDKCPEIFEKKTDL  444 (617)
Q Consensus       403 -----------------------------------~~~C~~C~~~f~~~~~l~~H~~~h~---~~~C~~C~~~f~~~~~l  444 (617)
                                                         ...|.+||+.|.+.++|..|+++|.   ||.|.+|++.|..+.+|
T Consensus       844 ~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnL  923 (958)
T KOG1074|consen  844 KTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNL  923 (958)
T ss_pred             ccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhh
Confidence                                               1569999999999999999999996   89999999999999999


Q ss_pred             HHHHhhhCCCCc
Q psy13389        445 QEHVDKCHNLHE  456 (617)
Q Consensus       445 ~~H~~~~H~~~~  456 (617)
                      +.||.+ |.+.+
T Consensus       924 KvHMgt-H~w~q  934 (958)
T KOG1074|consen  924 KVHMGT-HMWVQ  934 (958)
T ss_pred             hhhhcc-ccccC
Confidence            999997 65543

>KOG1074|consensus

Probab=99.95  E-value=1.7e-29  Score=259.18  Aligned_cols=209  Identities=22%  Similarity=0.435  Sum_probs=165.7

Q ss_pred             cccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCCC----CccCC---CCCCCccCChhHH
Q psy13389        291 FHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVN----PFKCD---VCPNETFEKETQL  363 (617)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----~~~C~---~C~~~~f~~~~~l  363 (617)
                      -+|-+|-+...-++.|+.|.++|+|++||+|.+||+.|.++.+|+.||-.|...-    +|.|+   +|-+ .|.....|
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~-kftn~V~l  684 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQK-KFTNAVTL  684 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcc-cccccccc
Confidence            6799999999999999999999999999999999999999999999998887553    47799   9987 78888899


Q ss_pred             HHHhhhccCC-C------------CcccCccCCcCCCchhHHHHhhhhcC----------------CC----cccccccc
Q psy13389        364 SLHMRTVHGV-K------------PFKCSMCDEGFPKKSVLKEHLRVSHN----------------VN----PFKCDICF  410 (617)
Q Consensus       364 ~~H~~~h~~~-~------------~~~C~~C~~~f~~~~~l~~H~~~h~~----------------~~----~~~C~~C~  410 (617)
                      ..|++.|.+. .            .-+|..|.+.|.....+..++..|.+                +.    +..+..|+
T Consensus       685 pQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~  764 (958)
T KOG1074|consen  685 PQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCG  764 (958)
T ss_pred             cceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccccc
Confidence            9999998832 1            14699999999888888888776622                12    46788888


Q ss_pred             ccccChHhHHHHHHcCC---------------------------------------------------------------
Q psy13389        411 KLFTKKSNLRTHIKTHE---------------------------------------------------------------  427 (617)
Q Consensus       411 ~~f~~~~~l~~H~~~h~---------------------------------------------------------------  427 (617)
                      ..+.....+..+-..+.                                                               
T Consensus       765 ~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~  844 (958)
T KOG1074|consen  765 RELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATK  844 (958)
T ss_pred             cccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccccc
Confidence            88877666555422110                                                               


Q ss_pred             ----------------------------------CCCCccccccccCchhHHHHHhhhCCCCccccccccCCCCCCCCcc
Q psy13389        428 ----------------------------------PIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPKEKS  473 (617)
Q Consensus       428 ----------------------------------~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~k~  473 (617)
                                                        ...|..||+.|.+.+.|++|+++ |+                ++||
T Consensus       845 ~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rT-Ht----------------g~KP  907 (958)
T KOG1074|consen  845 TNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRT-HT----------------GPKP  907 (958)
T ss_pred             cccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhc-CC----------------CCCC
Confidence                                              05699999999999999999999 98                9999


Q ss_pred             cccCccccccccchhHHHHHhhhhcCCCCCcccccccccccccccceeeeccCC
Q psy13389        474 FNCSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSS  527 (617)
Q Consensus       474 f~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~adiv~~~t~s~  527 (617)
                      |.|.+|++.|..+..|+.|+..|.-..  +..        -++.-+.+++|+.+
T Consensus       908 F~C~fC~~aFttrgnLKvHMgtH~w~q--~~s--------rrG~~~~~~~~~vs  951 (958)
T KOG1074|consen  908 FFCHFCEEAFTTRGNLKVHMGTHMWVQ--PPS--------RRGPSPFIGSTGVS  951 (958)
T ss_pred             ccchhhhhhhhhhhhhhhhhccccccC--CCc--------cCCCCcccCCCCCC
Confidence            999999999999999999999887332  111        12555666666544

>KOG3608|consensus

Probab=99.95  E-value=1.3e-27  Score=221.80  Aligned_cols=303  Identities=23%  Similarity=0.479  Sum_probs=224.9

Q ss_pred             CccccCChHHHHHHHHhhcCCCCCCcCCCC-CcccccC--CCCcccCC-hHHHHHHHHhhcCCC------cee------c
Q psy13389         62 CPKRYARKNRLTNHLRTHEAGSGDEKSEGG-EGSFTCS--QCPKTFVD-KWHLNRHLKSHSENK------VFR------C  125 (617)
Q Consensus        62 C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~-~~~~~C~--~C~~~f~~-~~~l~~H~~~h~~~~------~~~------C  125 (617)
                      |.-..+....+..|+..|....++...... ...+.|.  .|++...+ ...|.+|.-.|--..      ...      =
T Consensus        36 C~~~~s~~~h~~dHL~~h~~~~~e~~~~~eh~de~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~di  115 (467)
T KOG3608|consen   36 CTGEWSLNGHIGDHLEHHAKAQDERGAHAEHTDEHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDI  115 (467)
T ss_pred             hcchhhhhhHHHHHHHhhhccccccccccccccceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCc
Confidence            333344444555555555443333222221 2257775  58887766 578999987652100      000      0


Q ss_pred             cccccccCCHHHHHHHHHhcCCCcceec--CccccccCChHHHHHHHHHccC------------CC-CcccC--cCcccc
Q psy13389        126 EQCRFDFYVKREYNRHMKIHDGVKVFLC--SVCSKTFTDKVKFNRHMRAHEG------------IK-PFQCS--VCSESF  188 (617)
Q Consensus       126 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~------------~~-~~~C~--~C~~~f  188 (617)
                      ..|...|.....+      -.-...|.|  ..|+..|.+...|..|+..|.-            ++ .+.|.  .|-+.|
T Consensus       116 g~c~~~f~~~~~i------p~~g~~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~  189 (467)
T KOG3608|consen  116 GACTAPFRLMEKI------PALGQNFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHM  189 (467)
T ss_pred             CcccCCcchhhcc------ccchhhhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhh
Confidence            1122222221111      111123667  4688888888888888776632            11 24454  588999


Q ss_pred             CChHHHHHHHHhccCCCCcccCCCcccccCchhhhhhhhhhc--CCCcccCCCCccccCChhHHHHHHhhccCCCceecC
Q psy13389        189 TQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHN--GIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT  266 (617)
Q Consensus       189 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  266 (617)
                      .+++.|+.|++.|++++...|+.|+..|.++..|-.|.+..+  ...+|+|..|.+.|.+...|..|+..|..  -|+|+
T Consensus       190 ~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCp  267 (467)
T KOG3608|consen  190 GNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCP  267 (467)
T ss_pred             ccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--ccccc
Confidence            999999999999999999999999999999999999987544  45689999999999999999999998875  59999


Q ss_pred             CCCCcCCCHHHHHHHHHh-cCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc--cccccCChhhHHHHHhhhc-
Q psy13389        267 MCPKCFTRKDDLNRHMRN-HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQH-  342 (617)
Q Consensus       267 ~C~~~f~~~~~L~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-  342 (617)
                      .|+.+....++|..|++. |...+||+|+.|++.|.+.+.|+.|+.+|+ +..|+|..  |..+|++..+|++|++.+| 
T Consensus       268 lCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhE  346 (467)
T KOG3608|consen  268 LCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHE  346 (467)
T ss_pred             ccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhcc
Confidence            999999999999999985 778899999999999999999999999988 67899998  9999999999999999888 


Q ss_pred             CCC--CccCCCCCCCccCChhHHHHHhhhccCCC
Q psy13389        343 GVN--PFKCDVCPNETFEKETQLSLHMRTVHGVK  374 (617)
Q Consensus       343 ~~~--~~~C~~C~~~~f~~~~~l~~H~~~h~~~~  374 (617)
                      |.+  +|+|-.|++ .|++-.+|..|++..++-+
T Consensus       347 g~np~~Y~CH~Cdr-~ft~G~~L~~HL~kkH~f~  379 (467)
T KOG3608|consen  347 GNNPILYACHCCDR-FFTSGKSLSAHLMKKHGFR  379 (467)
T ss_pred             CCCCCceeeecchh-hhccchhHHHHHHHhhccc
Confidence            433  699999998 8999999999988776543

>KOG3608|consensus

Probab=99.95  E-value=3e-27  Score=219.33  Aligned_cols=237  Identities=27%  Similarity=0.480  Sum_probs=200.6

Q ss_pred             ccC--CCCccccCChhHHHHHHhhccC------------C-Cceec--CCCCCcCCCHHHHHHHHHhcCCCCCcccCccc
Q psy13389        235 FLC--SMCAKCFSRKDDLNRHMKIHEG------------S-KRYLC--TMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCF  297 (617)
Q Consensus       235 ~~C--~~C~~~f~~~~~L~~H~~~h~~------------~-~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~  297 (617)
                      |.|  ..|+..|.+...|..|+..|.-            + ..+.|  ..|.+.|.++..|+.|++.|+++|...|+.||
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg  214 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCG  214 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHH
Confidence            666  4599999999999888876631            1 12455  46889999999999999999999999999999


Q ss_pred             cccCCHHHHHHHHHHhC--CCCCccCCccccccCChhhHHHHHhhhcCCCCccCCCCCCCccCChhHHHHHhh-hccCCC
Q psy13389        298 ESFTQKALLNIHLRIHT--NSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMR-TVHGVK  374 (617)
Q Consensus       298 ~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~f~~~~~l~~H~~-~h~~~~  374 (617)
                      ..|.++..|-.|++.-+  +..+|+|..|.|.|.+...|+.|+..|-  +-|+|+.|+. +-...+.|..|++ .|...+
T Consensus       215 ~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdm-tc~~~ssL~~H~r~rHs~dk  291 (467)
T KOG3608|consen  215 ELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDM-TCSSASSLTTHIRYRHSKDK  291 (467)
T ss_pred             HHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hccccccccc-CCCChHHHHHHHHhhhccCC
Confidence            99999999999987654  4568999999999999999999998874  5799999987 8889999999998 567789


Q ss_pred             CcccCccCCcCCCchhHHHHhhhhcCCCcccccc--ccccccChHhHHHHHHcCC------CCCCccccccccCchhHHH
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI--CFKLFTKKSNLRTHIKTHE------PIPCDKCPEIFEKKTDLQE  446 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~------~~~C~~C~~~f~~~~~l~~  446 (617)
                      ||+|+.|++.|.+.+.|.+|..+|+ +-.|.|..  |.++|.+...|++|++.++      +|.|..|.+.|++-.+|..
T Consensus       292 pfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~  370 (467)
T KOG3608|consen  292 PFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSA  370 (467)
T ss_pred             CccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHH
Confidence            9999999999999999999999887 67799999  9999999999999998764      7999999999999999999


Q ss_pred             HHhhhCCCCccccccccCCCCCCCCcccccCccccccccc
Q psy13389        447 HVDKCHNLHEEDEEEGLDEFDAPKEKSFNCSKCLNIVRIP  486 (617)
Q Consensus       447 H~~~~H~~~~~~~~~~~~~~~~~~~k~f~C~~C~~~f~~~  486 (617)
                      |+.+.|.....           .|-+.|.=.+|..+|-+-
T Consensus       371 HL~kkH~f~~P-----------sGh~RFtYk~~edG~mRL  399 (467)
T KOG3608|consen  371 HLMKKHGFRLP-----------SGHKRFTYKVDEDGFMRL  399 (467)
T ss_pred             HHHHhhcccCC-----------CCCCceeeeeccCceeee
Confidence            99999974222           356666666666666553

>KOG2462|consensus

Probab=99.93  E-value=3.5e-27  Score=214.60  Aligned_cols=131  Identities=29%  Similarity=0.645  Sum_probs=70.8

Q ss_pred             cccCccccccCCHHHHHHHHHHhCC---CCCccCCccccccCChhhHHHHHhhhcCCCCccCCCCCCCccCChhHHHHHh
Q psy13389        291 FHCSVCFESFTQKALLNIHLRIHTN---SKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHM  367 (617)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~f~~~~~l~~H~  367 (617)
                      |+|+.||+.+.+..+|.+|.++|-.   .+.+.|++|++.|.+...|+.|+++|.  -+++|.+||| .|.+...|+-|+
T Consensus       131 ~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGK-aFSRPWLLQGHi  207 (279)
T KOG2462|consen  131 YKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGK-AFSRPWLLQGHI  207 (279)
T ss_pred             eeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccc-cccchHHhhccc
Confidence            3333344444443344444333321   234455555555555555555555543  3455555555 555556666666


Q ss_pred             hhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHHHHHH
Q psy13389        368 RTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIK  424 (617)
Q Consensus       368 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  424 (617)
                      |+|+|+|||.|+.|++.|..+++|+.||++|.+.|+|+|..|+|+|..++.|.+|..
T Consensus       208 RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  208 RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             ccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            666666666666666666666666666666666666666666666666666665554

>KOG2462|consensus

Probab=99.93  E-value=8.3e-27  Score=212.13  Aligned_cols=130  Identities=34%  Similarity=0.704  Sum_probs=60.3

Q ss_pred             cccCCCcccccCchhhhhhhhhhcC---CCcccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHH
Q psy13389        207 FQCNVCYICFTNKSDLNRHSRIHNG---IKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMR  283 (617)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  283 (617)
                      |+|+.|++.+.+.++|.+|.++|-.   .+.+.|++|++.|.+...|..|+++|.  -+++|.+|||.|.....|+-|+|
T Consensus       131 ~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiR  208 (279)
T KOG2462|consen  131 YKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIR  208 (279)
T ss_pred             eeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccc
Confidence            4444444444444444444444422   233444444444444444444444443  23444444444444444444444


Q ss_pred             hcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHH
Q psy13389        284 NHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHL  338 (617)
Q Consensus       284 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  338 (617)
                      +|+|+|||.|+.|++.|..+++|+.|+++|.+.|+|+|..|+|+|..++.|.+|.
T Consensus       209 THTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  209 THTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             cccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhh
Confidence            4444444444444444444444444444444444444444444444444444443

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=99.93  E-value=1.4e-26  Score=225.86  Aligned_cols=132  Identities=36%  Similarity=0.569  Sum_probs=119.0

Q ss_pred             cchhHHHHHhhhhcCCCCCcccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCc
Q psy13389        485 IPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHS  564 (617)
Q Consensus       485 ~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~  564 (617)
                      +++...+........++..+..+.++++++.+||||+|||+|++|+|.++||+| |+||++||++.|+|+||+++++.++
T Consensus       164 ~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pil~~~~l~~-G~hI~aiGad~p~k~Eld~e~l~ra  242 (330)
T COG2423         164 DPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWLKP-GTHINAIGADAPGKRELDPEVLARA  242 (330)
T ss_pred             CHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCeecHhhcCC-CcEEEecCCCCcccccCCHHHHHhc
Confidence            345555555565566666678899999999999999999999999999999999 9999999999999999999999999


Q ss_pred             -eEEEecchhhhcchhhhhhcc------ccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        565 -SIFFDSEAAARGELKGLYEQV------PANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       565 -~~~~d~~~~~~~e~~~~~~~~------~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                       +||||+++|++.|.|++.+++      ++.++++||+|+.|..+ |+++++|||||||||
T Consensus       243 ~~vvvD~~~q~~~e~Gei~~~~~~g~~~~~~~~~eLg~vv~g~~~gR~~~~eITlf~svG~  303 (330)
T COG2423         243 DRVVVDSLEQTRKESGEISQAVAAGVLSPDAIVAELGDVVAGKIPGRESDDEITLFDSVGL  303 (330)
T ss_pred             CeEEEcCHHHhhccccchhhHhhcccCCcccchhHHHHHHcCCCCCCCCCCceEEEeCCCc
Confidence             899999999998999998874      66778999999999999 999999999999997

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=99.89  E-value=3.2e-24  Score=210.91  Aligned_cols=128  Identities=21%  Similarity=0.329  Sum_probs=108.3

Q ss_pred             hHHHHHhhhhcCCCCCcccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCce-E
Q psy13389        488 EIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSS-I  566 (617)
Q Consensus       488 ~l~~H~~~~~~~~~~~~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~-~  566 (617)
                      .+......+....+..+.+++++++++.+||||+|||+|++|+|+.+||+| |+||++||++.|+|+|||++++.+++ |
T Consensus       154 ~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P~~~~~~l~p-g~hV~aiGs~~p~~~El~~~~l~~a~~v  232 (301)
T PRK06407        154 HARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTPIFNRKYLGD-EYHVNLAGSNYPNRREAEHSVLNDADIV  232 (301)
T ss_pred             HHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCcEecHHHcCC-CceEEecCCCCCCcccCCHHHHHhCCEE
Confidence            333344444333344577789999999999999999999999999999999 99999999999999999999999995 8


Q ss_pred             EEecchhhhcchhhhhhccc-cccccccccccccccccCCCCceeeeccCCC
Q psy13389        567 FFDSEAAARGELKGLYEQVP-ANMVGEVGGLIAANLTRDARYPLTVFHSMGV  617 (617)
Q Consensus       567 ~~d~~~~~~~e~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~f~~~G~  617 (617)
                      |||+++|++.|+|+++.++. +..++|||||+. ...|.++++|||||||||
T Consensus       233 ~vD~~~~~~~e~Ge~~~~~~~g~~~~eLgev~~-~~gr~~~~~itvfksvG~  283 (301)
T PRK06407        233 VTEHMEQSLRESSEISEYVKKGGKPVELKDFAK-NNGSYSGLRRTVFKSMGI  283 (301)
T ss_pred             EECCHHHHHHhccchhhHhhcCCceeeHHHHhc-CCCCCCCCCeEEEeCCch
Confidence            99999999999999987753 345679999996 334888899999999997

>PRK06823 ornithine cyclodeaminase; Validated

Probab=99.89  E-value=1.1e-23  Score=207.96  Aligned_cols=114  Identities=28%  Similarity=0.368  Sum_probs=101.6

Q ss_pred             CCcccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCce-EEEecchhhhcchhh
Q psy13389        502 PAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSS-IFFDSEAAARGELKG  580 (617)
Q Consensus       502 ~~~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~-~~~d~~~~~~~e~~~  580 (617)
                      ..+.++.++++++++||||+|||+|++|+|+.+||+| |+||++||++.|+|+|||++++.+++ ||||+++|+. |+|+
T Consensus       178 ~~v~~~~~~~~av~~ADIV~taT~s~~P~~~~~~l~~-G~hi~~iGs~~p~~~Eld~~~l~~a~~vvvD~~~~~~-~~Ge  255 (315)
T PRK06823        178 FAVNTTLDAAEVAHAANLIVTTTPSREPLLQAEDIQP-GTHITAVGADSPGKQELDAELVARADKILVDSIAQCT-DFGE  255 (315)
T ss_pred             CcEEEECCHHHHhcCCCEEEEecCCCCceeCHHHcCC-CcEEEecCCCCcccccCCHHHHhhCCEEEECCHHHHH-HcCc
Confidence            4466678999999999999999999999999999999 99999999999999999999999995 9999999986 5788


Q ss_pred             hhhcc-----ccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        581 LYEQV-----PANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       581 ~~~~~-----~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      ++.++     .++.+.+|||||.|+.+ |.++++|||||||||
T Consensus       256 ~~~~~~~g~~~~~~i~eLgel~~g~~~gr~~~~~itvfksvG~  298 (315)
T PRK06823        256 VSHAFKAGLLAHHNLTELGLALAQGIPFRENDQQITLADLTGV  298 (315)
T ss_pred             hhhHHHcCCCChhhhhHHHHHHcCCCCCCCCCCCEEEEcCCCc
Confidence            77553     23345699999999987 999999999999997

>KOG3623|consensus

Probab=99.88  E-value=1.6e-23  Score=211.53  Aligned_cols=105  Identities=30%  Similarity=0.689  Sum_probs=77.3

Q ss_pred             eeccccccccCCHHHHHHHHHhcC--CCcceecCccccccCChHHHHHHHHHccC-------------CCCcccCcCccc
Q psy13389        123 FRCEQCRFDFYVKREYNRHMKIHD--GVKVFLCSVCSKTFTDKVKFNRHMRAHEG-------------IKPFQCSVCSES  187 (617)
Q Consensus       123 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------~~~~~C~~C~~~  187 (617)
                      ..|++|++.+.....|+.|++.-+  .+..|.|..|..+|..+..|.+||..|..             .+.|+|..|++.
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA  290 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA  290 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh
Confidence            567777777777777777765432  34457777777777777777777777643             245788888888


Q ss_pred             cCChHHHHHHHHhccCCCCcccCCCcccccCchhhhhhhh
Q psy13389        188 FTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSR  227 (617)
Q Consensus       188 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  227 (617)
                      |..+..|+.|+|+|.|++||.|+.|+++|....++..|+.
T Consensus       291 FKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  291 FKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            8888888888888888888888888888877777777763

>KOG3623|consensus

Probab=99.88  E-value=2.1e-23  Score=210.63  Aligned_cols=78  Identities=32%  Similarity=0.695  Sum_probs=75.4

Q ss_pred             CcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCCCCccCCCCCCCccCChhHHHHHhh
Q psy13389        290 PFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMR  368 (617)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~f~~~~~l~~H~~  368 (617)
                      +|.|+.|+|.|...+.|.+|..-|+|.+||+|.+|.|.|+.+-.|..|+|.|.|++||+|+.|+| .|.....+..||.
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClK-RFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLK-RFSHSGSYSQHMN  971 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhh-hcccccchHhhhc
Confidence            39999999999999999999999999999999999999999999999999999999999999999 8999999999985

>PRK07589 ornithine cyclodeaminase; Validated

Probab=99.88  E-value=1.8e-23  Score=207.68  Aligned_cols=114  Identities=25%  Similarity=0.341  Sum_probs=102.8

Q ss_pred             CCcccccccccccccccceeeeccCCc--cchhhhhcccCccccccccccccccccchhhhhcCceEEEecchhhhcchh
Q psy13389        502 PAVQAYEHGEDAARDADILVTATYSSV--PVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELK  579 (617)
Q Consensus       502 ~~~~~~~~~~~~~~~adiv~~~t~s~~--p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~d~~~~~~~e~~  579 (617)
                      ..+.+++++++++.+||||+|||+|++  |||+.+||+| |+||++||++.|+|+|||++++.+++||||+++++..+ |
T Consensus       179 ~~v~~~~~~~~av~~ADIIvtaT~S~~~~Pvl~~~~lkp-G~hV~aIGs~~p~~~Eld~~~l~~a~v~vD~~~~~~~~-G  256 (346)
T PRK07589        179 LRIVACRSVAEAVEGADIITTVTADKTNATILTDDMVEP-GMHINAVGGDCPGKTELHPDILRRARVFVEYEPQTRIE-G  256 (346)
T ss_pred             CcEEEeCCHHHHHhcCCEEEEecCCCCCCceecHHHcCC-CcEEEecCCCCCCcccCCHHHHhcCEEEECCHHHHhhc-C
Confidence            346677899999999999999999987  9999999999 99999999999999999999999999999999998866 8


Q ss_pred             hhhhccccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        580 GLYEQVPANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       580 ~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      ++....++.+++|||||+.|+.+ |.++++|||||||||
T Consensus       257 el~~~~~~~~~~eLgeli~g~~~gR~~~~~itvFksvG~  295 (346)
T PRK07589        257 EIQQLPADFPVTELWRVLTGEAPGRESADQITLFDSVGF  295 (346)
T ss_pred             cccccccccccccHHHHhCCCCCCCCCCCCcEEEeCCCh
Confidence            76544455667899999999977 999999999999997

>KOG3007|consensus

Probab=99.87  E-value=3.1e-23  Score=187.31  Aligned_cols=116  Identities=28%  Similarity=0.359  Sum_probs=104.9

Q ss_pred             CCCcccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCceEEEecchhhhcchhh
Q psy13389        501 VPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKG  580 (617)
Q Consensus       501 ~~~~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~d~~~~~~~e~~~  580 (617)
                      ...++..++++.|+..+|||++||+|++|.+-++||+| |+||.+||++.|.|+|.|+++++.|.|+||+++.++.|+|+
T Consensus       192 qie~~~~qsl~~aV~~sDIIs~atlstePilfgewlkp-gthIdlVGsf~p~mhEcDdelIq~a~vfVDsre~aL~EsGe  270 (333)
T KOG3007|consen  192 QIELNQYQSLNGAVSNSDIISGATLSTEPILFGEWLKP-GTHIDLVGSFKPVMHECDDELIQSACVFVDSREHALLESGE  270 (333)
T ss_pred             EEEEEehhhhhcccccCceEEeccccCCceeeeeeecC-CceEeeeccCCchHHHHhHHHhhhheEEEecchHHhhhhhh
Confidence            34456778999999999999999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             hhhcc---ccccccccccccccccc-c--CCCCc-eeeeccCCC
Q psy13389        581 LYEQV---PANMVGEVGGLIAANLT-R--DARYP-LTVFHSMGV  617 (617)
Q Consensus       581 ~~~~~---~~~~~~~l~~~~~~~~~-~--~~~~~-~~~f~~~G~  617 (617)
                      ++.+.   +..+.++|+|++.|.++ |  .+..+ ||+|||||+
T Consensus       271 ll~~~~~g~neI~a~l~dlikn~k~gr~~K~c~~~iTlfKsvG~  314 (333)
T KOG3007|consen  271 LLDSNIAGHNEIEAGLLDLIKNTKLGRNEKGCKRTITLFKSVGL  314 (333)
T ss_pred             hccccccCHHHHHhHHHHHhcCCcccccccCchhheehhhhhch
Confidence            98663   45678999999999987 5  44455 999999996

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=99.86  E-value=1.4e-22  Score=201.20  Aligned_cols=127  Identities=35%  Similarity=0.517  Sum_probs=93.7

Q ss_pred             hHHHHHhhhhcCCCCCcccccccccccccccceeeeccCCc--cchhhhhcccCccccccccccccccccchhhhhcCce
Q psy13389        488 EIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSV--PVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSS  565 (617)
Q Consensus       488 ~l~~H~~~~~~~~~~~~~~~~~~~~~~~~adiv~~~t~s~~--p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~  565 (617)
                      .+......... .+..+..+.++++++++||||+|||+|++  |+|+.+||+| |+||++||++.|+|+|||++++.+++
T Consensus       165 ~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDii~taT~s~~~~P~~~~~~l~~-g~hi~~iGs~~~~~~El~~~~~~~a~  242 (313)
T PF02423_consen  165 RAEAFAARLRD-LGVPVVAVDSAEEAVRGADIIVTATPSTTPAPVFDAEWLKP-GTHINAIGSYTPGMRELDDELLKRAD  242 (313)
T ss_dssp             HHHHHHHHHHC-CCTCEEEESSHHHHHTTSSEEEE----SSEEESB-GGGS-T-T-EEEE-S-SSTTBESB-HHHHHCSE
T ss_pred             HHHHHHHhhcc-ccccceeccchhhhcccCCEEEEccCCCCCCccccHHHcCC-CcEEEEecCCCCchhhcCHHHhccCC
Confidence            33444444443 25567788999999999999999999999  9999999999 99999999999999999999999999


Q ss_pred             EEEecchhhhcchhhhhhccccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        566 IFFDSEAAARGELKGLYEQVPANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       566 ~~~d~~~~~~~e~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      +|||+++++ .|+|+++....++.++|||||+.|+.+ |.+++++||||||||
T Consensus       243 ~~vd~~~~~-~~~Ge~~~~~~~~~~~eLgev~~g~~~gr~~~~~~tvf~svG~  294 (313)
T PF02423_consen  243 IVVDSEAQA-REAGELIQLSDEDIVAELGEVLTGKKPGRESDEEITVFKSVGL  294 (313)
T ss_dssp             EEESCHHHH-HHCCHHHCSTTCHCEEEHHHHHTTSS-S--STTSEEEEE----
T ss_pred             EEEccHHHH-hhcCcceecchhhceeEHHHHhcCCCCCCCCCCCeEEEECCCc
Confidence            999877766 567888775567788999999999987 999999999999997

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=99.86  E-value=1.4e-22  Score=202.35  Aligned_cols=113  Identities=31%  Similarity=0.479  Sum_probs=101.6

Q ss_pred             CcccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCceEEEecchhhhcchhhhh
Q psy13389        503 AVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLY  582 (617)
Q Consensus       503 ~~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~d~~~~~~~e~~~~~  582 (617)
                      .+.++.+.++++++||||+|||+|.+|++..+|++| |+||++||++.|+++|||++++.+++||||+++|++. +|++.
T Consensus       179 ~v~~~~~~~eav~~aDiVitaT~s~~P~~~~~~l~~-g~~v~~vGs~~p~~~Eld~~~l~~a~v~vD~~~~~~~-~ge~~  256 (325)
T TIGR02371       179 PVRAATDPREAVEGCDILVTTTPSRKPVVKADWVSE-GTHINAIGADAPGKQELDPEILKNAKIFVDDLEQATH-SGEIN  256 (325)
T ss_pred             cEEEeCCHHHHhccCCEEEEecCCCCcEecHHHcCC-CCEEEecCCCCcccccCCHHHHhcCcEEECCHHHHHh-cCchh
Confidence            356678999999999999999999999999999999 9999999999999999999999999999999999884 78776


Q ss_pred             hccc------cccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        583 EQVP------ANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       583 ~~~~------~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      .+.+      +.+.+||||||.|+.+ |.++++|||||||||
T Consensus       257 ~a~~~g~~~~~~~~~eLgev~~g~~~gr~~~~~itvfksvG~  298 (325)
T TIGR02371       257 VPISKGIIRVDDLHASLGEVITGLKEGRTSPEEITIFDSTGL  298 (325)
T ss_pred             hHHHcCCCChHhhhhHHHHHHcCCCCCCCCCCceEEEeCCCc
Confidence            5532      2345699999999977 999999999999997

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PRK07340 ornithine cyclodeaminase; Validated

Probab=99.85  E-value=3.6e-22  Score=197.47  Aligned_cols=107  Identities=27%  Similarity=0.264  Sum_probs=96.0

Q ss_pred             ccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCceEEEecchhhhcchhhhhhcc-
Q psy13389        507 YEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQV-  585 (617)
Q Consensus       507 ~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~d~~~~~~~e~~~~~~~~-  585 (617)
                      +.+.++++.+||||+|||+|++|+|.. |++| |+||++||++.|+|+|||++++.+++||||++++++.|+|+++.++ 
T Consensus       179 ~~~~~~av~~aDiVitaT~s~~Pl~~~-~~~~-g~hi~~iGs~~p~~~El~~~~~~~a~v~vD~~~~~~~e~Ge~~~a~~  256 (304)
T PRK07340        179 PLDGEAIPEAVDLVVTATTSRTPVYPE-AARA-GRLVVAVGAFTPDMAELAPRTVRGSRLYVDDPAGARHEAGDLIQAGV  256 (304)
T ss_pred             ECCHHHHhhcCCEEEEccCCCCceeCc-cCCC-CCEEEecCCCCCCcccCCHHHHhhCeEEEcCHHHHHHhccchhhcCC
Confidence            467888999999999999999999987 9999 9999999999999999999999999999999999999999998874 


Q ss_pred             ccccccccccccccccccCCCCceeeeccCCC
Q psy13389        586 PANMVGEVGGLIAANLTRDARYPLTVFHSMGV  617 (617)
Q Consensus       586 ~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~G~  617 (617)
                      .++.+.||||||.|+.+  .++++||||||||
T Consensus       257 ~~~~i~eLg~vi~g~~~--~~~~~tvfksvG~  286 (304)
T PRK07340        257 DWSRVRPLADALRGAWP--ARGGPVLFKSVGC  286 (304)
T ss_pred             CccccccHHHHhcCCCC--CCCCcEEEECCCc
Confidence            34456799999999864  2346899999997

>PRK06046 alanine dehydrogenase; Validated

Probab=99.84  E-value=6.9e-22  Score=197.96  Aligned_cols=111  Identities=33%  Similarity=0.493  Sum_probs=98.5

Q ss_pred             cccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCceEEEecchhhhcchhhhhh
Q psy13389        504 VQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYE  583 (617)
Q Consensus       504 ~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~d~~~~~~~e~~~~~~  583 (617)
                      +..+.+.++++. +|||++|||+.+|+|..+|++| |+||++||++.|+++|||++++.+++||||++++++ ++|++..
T Consensus       182 v~~~~~~~~~l~-aDiVv~aTps~~P~~~~~~l~~-g~hV~~iGs~~p~~~El~~~~~~~a~vvvD~~~~~~-~~ge~~~  258 (326)
T PRK06046        182 VTVAEDIEEACD-CDILVTTTPSRKPVVKAEWIKE-GTHINAIGADAPGKQELDPEILLRAKVVVDDMEQAL-HSGEINV  258 (326)
T ss_pred             EEEeCCHHHHhh-CCEEEEecCCCCcEecHHHcCC-CCEEEecCCCCCccccCCHHHHhCCcEEECCHHHHH-HcCchhh
Confidence            455678888887 9999999999999999999999 999999999999999999999999999999999988 5788755


Q ss_pred             cc------ccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        584 QV------PANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       584 ~~------~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      ++      .++++++||||+.|+.+ |.++++|||||||||
T Consensus       259 ~~~~g~~~~~~~~~elgell~g~~~gr~~~~~itvfksvG~  299 (326)
T PRK06046        259 PLSKGIIREEDIYATLGEVIAGKKPGRESDEEITIFDSTGL  299 (326)
T ss_pred             HHHcCCCChhhhhchHHHHhCCCCCCCCCCCceEEEeCCCc
Confidence            42      22345799999999977 888999999999997

>PRK08618 ornithine cyclodeaminase; Validated

Probab=99.83  E-value=1.6e-21  Score=195.37  Aligned_cols=112  Identities=32%  Similarity=0.511  Sum_probs=100.7

Q ss_pred             cccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCc-eEEEecchhhhcchhhhh
Q psy13389        504 VQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHS-SIFFDSEAAARGELKGLY  582 (617)
Q Consensus       504 ~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~-~~~~d~~~~~~~e~~~~~  582 (617)
                      +....+.++++.++|||++||+|..|++. +|++| |+||++||++.|+++|+|++++.++ .||||++++++.|+|+++
T Consensus       180 ~~~~~~~~~~~~~aDiVi~aT~s~~p~i~-~~l~~-G~hV~~iGs~~p~~~E~~~~~~~~a~~vvvD~~~~~~~e~G~~~  257 (325)
T PRK08618        180 IYVVNSADEAIEEADIIVTVTNAKTPVFS-EKLKK-GVHINAVGSFMPDMQELPSEAIARANKVVVESKEAALEETGDLI  257 (325)
T ss_pred             EEEeCCHHHHHhcCCEEEEccCCCCcchH-HhcCC-CcEEEecCCCCcccccCCHHHHhhCCEEEECCHHHHHHhcCCcc
Confidence            44567788899999999999999999999 99999 9999999999999999999999998 499999999999999987


Q ss_pred             hccc------cccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        583 EQVP------ANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       583 ~~~~------~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      .++.      +.+.++||||+.|..+ |.++++||||||+||
T Consensus       258 ~~~~~~~~~~~~i~~eLgel~~g~~~gr~~~~~itvf~s~G~  299 (325)
T PRK08618        258 VPLKEGLISKDDIHGELGQIISGEIAGRESDEEITVFKSVGL  299 (325)
T ss_pred             cHHHcCCCChhhhhhhHHHHhcCCCCCCCCCCCeEEEeCCCc
Confidence            6532      2344799999999987 988999999999997

>PRK06141 ornithine cyclodeaminase; Validated

Probab=99.79  E-value=3.6e-20  Score=184.54  Aligned_cols=113  Identities=29%  Similarity=0.444  Sum_probs=102.5

Q ss_pred             cccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCceEEEecchhhhcchhhhhh
Q psy13389        504 VQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYE  583 (617)
Q Consensus       504 ~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~d~~~~~~~e~~~~~~  583 (617)
                      +.++.+.++++.+||||+++|+|.+|++..+|++| |+||+++|++.|+++||+++++.++.+|||++++++.|+|+++.
T Consensus       177 ~~~~~~~~~av~~aDIVi~aT~s~~pvl~~~~l~~-g~~i~~ig~~~~~~~El~~~~~~~a~~~vD~~~~~~~e~ge~~~  255 (314)
T PRK06141        177 AEVVTDLEAAVRQADIISCATLSTEPLVRGEWLKP-GTHLDLVGNFTPDMRECDDEAIRRASVYVDTRAGALAEAGDLLI  255 (314)
T ss_pred             eEEeCCHHHHHhcCCEEEEeeCCCCCEecHHHcCC-CCEEEeeCCCCcccccCCHHHHhcCcEEEcCHHHHHHhcCchhH
Confidence            55667888899999999999999999999999999 99999999999999999999999999999999999999999876


Q ss_pred             cc-----cc-ccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        584 QV-----PA-NMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       584 ~~-----~~-~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      +.     .+ ++++|||||+.|+.+ |.++++||||+|+||
T Consensus       256 a~~~g~~~~~~i~~elg~vl~g~~~gr~~~~~itvf~s~G~  296 (314)
T PRK06141        256 PIAEGVFSPDDIRGELAELCRGQHKGRTSDDEITLFKSVGT  296 (314)
T ss_pred             HHHcCCCChHHhhhhHHHHhCCCCCCCCCCCCeEEEECCCc
Confidence            63     22 334799999999987 999999999999997

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=99.79  E-value=3.8e-20  Score=185.42  Aligned_cols=134  Identities=25%  Similarity=0.321  Sum_probs=105.7

Q ss_pred             cccccccchhHHHHHhhhhcCCCCCcccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchh
Q psy13389        479 CLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDA  558 (617)
Q Consensus       479 C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~  558 (617)
                      +++.......+.....   ...+..+....++++++.+||||+|||+|.+|+|..+|++| |+||++||++.|+++|+++
T Consensus       160 ~~R~~~~a~~~a~~~~---~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p~i~~~~l~~-g~~i~~vg~~~p~~rEld~  235 (326)
T TIGR02992       160 WARDSAKAEALALQLS---SLLGIDVTAATDPRAAMSGADIIVTTTPSETPILHAEWLEP-GQHVTAMGSDAEHKNEIDP  235 (326)
T ss_pred             ECCCHHHHHHHHHHHH---hhcCceEEEeCCHHHHhccCCEEEEecCCCCcEecHHHcCC-CcEEEeeCCCCCCceecCH
Confidence            4444444444443332   12123345567888999999999999999999999999999 9999999999999999999


Q ss_pred             hhhcCce-EEEecchhhhcchhhhhhcc------ccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        559 AIYSHSS-IFFDSEAAARGELKGLYEQV------PANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       559 ~~~~~~~-~~~d~~~~~~~e~~~~~~~~------~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      +++.++. +++|+++++. |+|++..++      +++++++||||+.|+.+ |.++++||||||+||
T Consensus       236 ~~l~~a~~~vvD~~~~~~-~~g~~~~~~~~g~~~~~~~~~elg~v~~g~~~gr~~~~~itvf~s~G~  301 (326)
T TIGR02992       236 AVIAKADHYVADRLSQTA-TLGELHHAIAAGLAAALQVFAELGQVIAGDRPGRRSPDDITIADLTGT  301 (326)
T ss_pred             HHHhccCEEEcCCHHHHH-hcCchHHHHHcCCCChhhccccHHHHhcCCCCCCCCCCCEEEEeCCCc
Confidence            9999998 5568888874 567665442      23456899999999987 999999999999997

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK08291 ectoine utilization protein EutC; Validated

Probab=99.78  E-value=9.7e-20  Score=183.00  Aligned_cols=113  Identities=28%  Similarity=0.456  Sum_probs=100.0

Q ss_pred             CcccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCce-EEEecchhhhcchhhh
Q psy13389        503 AVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSS-IFFDSEAAARGELKGL  581 (617)
Q Consensus       503 ~~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~-~~~d~~~~~~~e~~~~  581 (617)
                      .+....+.++++.+||||++||++.+|++..+|+++ |+||++||++.|+++|++++++.++. |+||+++++. |+|++
T Consensus       184 ~v~~~~d~~~al~~aDiVi~aT~s~~p~i~~~~l~~-g~~v~~vg~d~~~~rEld~~~l~~a~~v~vD~~~~~~-~~g~~  261 (330)
T PRK08291        184 PVTVARDVHEAVAGADIIVTTTPSEEPILKAEWLHP-GLHVTAMGSDAEHKNEIAPAVFAAADLYVCDRLSQTR-RLGEL  261 (330)
T ss_pred             eEEEeCCHHHHHccCCEEEEeeCCCCcEecHHHcCC-CceEEeeCCCCCCcccCCHHHHhhCCEEEeCCHHHHH-Hhccc
Confidence            345567888999999999999999999999999999 99999999999999999999999997 8899999986 67887


Q ss_pred             hhcc------ccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        582 YEQV------PANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       582 ~~~~------~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      ..++      .++++++||||+.|+.+ |.++++||||||+||
T Consensus       262 ~~~~~~g~~~~~~~~~elg~ll~g~~~~r~~~~~itvf~s~G~  304 (330)
T PRK08291        262 HHAIAAGLVAADAVFPELGQVIAGRRPGRTSDDDITICDLTGT  304 (330)
T ss_pred             hhHHHcCCCChhhhhhhHHHHHcCCCCCCCCCCCEEEEeCCCc
Confidence            5542      23456899999999977 999999999999997

>PRK06199 ornithine cyclodeaminase; Validated

Probab=99.71  E-value=5.2e-18  Score=171.69  Aligned_cols=109  Identities=18%  Similarity=0.327  Sum_probs=89.1

Q ss_pred             CcccccccccccccccceeeeccCCc------cchhhhhcccCccccccccccccccccchhhhhcC-ceEEEecch---
Q psy13389        503 AVQAYEHGEDAARDADILVTATYSSV------PVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSH-SSIFFDSEA---  572 (617)
Q Consensus       503 ~~~~~~~~~~~~~~adiv~~~t~s~~------p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~-~~~~~d~~~---  572 (617)
                      .+.++.++++++++||||+|||+|++      |+|+.+||+| |+||+++|+     +|+|++++.. ++||||+.+   
T Consensus       210 ~v~~~~s~~eav~~ADIVvtaT~s~~~~~s~~Pv~~~~~lkp-G~hv~~ig~-----~eld~~~l~~~a~vvvD~~~~~~  283 (379)
T PRK06199        210 NVEVVDSIEEVVRGSDIVTYCNSGETGDPSTYPYVKREWVKP-GAFLLMPAA-----CRIDEGMEQGDVRKVVDNTGLYE  283 (379)
T ss_pred             eEEEeCCHHHHHcCCCEEEEccCCCCCCCCcCcEecHHHcCC-CcEEecCCc-----ccCCHHHHhCCCcEEEcChhHhH
Confidence            47778999999999999999998766      9999999999 999999888     5899999998 789999953   


Q ss_pred             hhhcchhh------------hhhcc-----ccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        573 AARGELKG------------LYEQV-----PANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       573 ~~~~e~~~------------~~~~~-----~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      +...|+|+            +..++     ..+.+.||||||.|+.+ |.++++||||||+||
T Consensus       284 ~~~~e~g~~~~~~~~~~~g~~~~~~~~g~i~~~~i~eLgevl~g~~~gR~~~~~itvfksvG~  346 (379)
T PRK06199        284 AWFEEVPKPAHNLIPVIGVRFMDMIAEGKLTLDQLEDIGDIVAGKAPGRQNDEEIIIMSVGGM  346 (379)
T ss_pred             HHHHhcccccccccccccchhhhHHHcCCCChhhhhhHHHHHcCCCCCCCCCCceEEEeCCCc
Confidence            33344433            32222     22335699999999987 989999999999997

>KOG3576|consensus

Probab=99.67  E-value=2.5e-17  Score=141.96  Aligned_cols=115  Identities=40%  Similarity=0.760  Sum_probs=88.1

Q ss_pred             CCcccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHH
Q psy13389        232 IKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLR  311 (617)
Q Consensus       232 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  311 (617)
                      ...|.|.+|++.|.....|.+|++.|..-++|.|..||+.|.....|++|+++|+|.+||+|..|++.|++.-.|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            34577888888888888888888888777888888888888888888888888888888888888888888888888876


Q ss_pred             HhCC-----------CCCccCCccccccCChhhHHHHHhhhcCCCC
Q psy13389        312 IHTN-----------SKPHACSICTESFSQKSNLYIHLKLQHGVNP  346 (617)
Q Consensus       312 ~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  346 (617)
                      .-++           .+.|.|..||.+-.....+..|++.||...|
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            5433           3557788888777777777777777775543

>KOG3576|consensus

Probab=99.66  E-value=2.6e-17  Score=141.88  Aligned_cols=128  Identities=30%  Similarity=0.573  Sum_probs=108.0

Q ss_pred             CCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHH
Q psy13389        259 GSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHL  338 (617)
Q Consensus       259 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  338 (617)
                      +...|.|.+|+|.|.....|.+|++-|...+.|-|..||+.|.....|++|+++|++.+||+|..|++.|..+-.|..|+
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            34569999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCccCCCCCCCccCChhHHHHHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcc
Q psy13389        339 KLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPF  404 (617)
Q Consensus       339 ~~h~~~~~~~C~~C~~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  404 (617)
                      +.-||...         .    ..++     ....+.|.|..||.+-.....+..|+..||...|+
T Consensus       194 ~kvhgv~~---------~----yayk-----err~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  194 KKVHGVQH---------Q----YAYK-----ERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             HHHcCchH---------H----HHHH-----HhhhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence            98887632         0    0011     11246788888888888888888888888766543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.26  E-value=1.3e-11  Score=128.03  Aligned_cols=141  Identities=18%  Similarity=0.409  Sum_probs=80.5

Q ss_pred             eecCCCCCcCCCHHHHHHHHHhcCCCCCcccCc--cccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhh
Q psy13389        263 YLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKL  340 (617)
Q Consensus       263 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  340 (617)
                      ..|+.|...... ..|..|..... ...-.|+.  |+..|.. ..+..|         +.|+.|++.|. ...|..|++.
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~~C~-r~~V~Cp~~~Cg~v~~r-~el~~H---------~~C~~Cgk~f~-~s~LekH~~~  474 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEAYCS-RHNVVCPHDGCGIVLRV-EEAKNH---------VHCEKCGQAFQ-QGEMEKHMKV  474 (567)
T ss_pred             EECCCCCCccch-hHHHHHHhhCC-CcceeCCcccccceeec-cccccC---------ccCCCCCCccc-hHHHHHHHHh
Confidence            456666655543 33446654332 23345663  6666632 222333         46777777664 4566777766


Q ss_pred             hcCCCCccCCCCCCCccCChhHHHHHhhhccCCCCcccCccCCcCCC----------chhHHHHhhhhcCCCcccccccc
Q psy13389        341 QHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPK----------KSVLKEHLRVSHNVNPFKCDICF  410 (617)
Q Consensus       341 h~~~~~~~C~~C~~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~----------~~~l~~H~~~h~~~~~~~C~~C~  410 (617)
                      +|  .++.|+ ||+ .+ ....|..|+.+|.+.+++.|.+|++.|..          ...|..|.... |.+++.|..||
T Consensus       475 ~H--kpv~Cp-Cg~-~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cg  548 (567)
T PLN03086        475 FH--EPLQCP-CGV-VL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCG  548 (567)
T ss_pred             cC--CCccCC-CCC-Cc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccC
Confidence            65  566776 764 33 44666667666666677777777776641          23566666663 66666666666


Q ss_pred             ccccChHhHHHHH
Q psy13389        411 KLFTKKSNLRTHI  423 (617)
Q Consensus       411 ~~f~~~~~l~~H~  423 (617)
                      +.+..+ .|..|+
T Consensus       549 k~Vrlr-dm~~H~  560 (567)
T PLN03086        549 RSVMLK-EMDIHQ  560 (567)
T ss_pred             Ceeeeh-hHHHHH
Confidence            665433 344554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.23  E-value=3.4e-11  Score=124.84  Aligned_cols=98  Identities=18%  Similarity=0.475  Sum_probs=53.7

Q ss_pred             ecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccC----------Chhh
Q psy13389        264 LCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFS----------QKSN  333 (617)
Q Consensus       264 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~  333 (617)
                      .|+.|++.|. ...|..|++.|+  +++.|+ |++.+ .+..|..|+.+|.+.+++.|+.|++.|.          ..+.
T Consensus       455 ~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~  529 (567)
T PLN03086        455 HCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRG  529 (567)
T ss_pred             cCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhh
Confidence            5666666554 455566666554  456666 66433 4456666666666666666666666653          1235


Q ss_pred             HHHHHhhhcCCCCccCCCCCCCccCChhHHHHHhhh
Q psy13389        334 LYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRT  369 (617)
Q Consensus       334 l~~H~~~h~~~~~~~C~~C~~~~f~~~~~l~~H~~~  369 (617)
                      |..|.... |.+++.|..||+ .+. ...+..|+..
T Consensus       530 Lt~HE~~C-G~rt~~C~~Cgk-~Vr-lrdm~~H~~~  562 (567)
T PLN03086        530 MSEHESIC-GSRTAPCDSCGR-SVM-LKEMDIHQIA  562 (567)
T ss_pred             HHHHHHhc-CCcceEccccCC-eee-ehhHHHHHHH
Confidence            66665553 566666666665 232 2345555443

>PHA00733 hypothetical protein

Probab=99.09  E-value=7.5e-11  Score=99.65  Aligned_cols=83  Identities=25%  Similarity=0.466  Sum_probs=69.1

Q ss_pred             CCCCcccCccCCcCCCchhHHHH--hh---hhcCCCccccccccccccChHhHHHHHHcC-CCCCCccccccccCchhHH
Q psy13389        372 GVKPFKCSMCDEGFPKKSVLKEH--LR---VSHNVNPFKCDICFKLFTKKSNLRTHIKTH-EPIPCDKCPEIFEKKTDLQ  445 (617)
Q Consensus       372 ~~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~C~~C~~~f~~~~~l~  445 (617)
                      ..+++.|.+|.+.|.....|..|  ++   .+++.+||.|+.|++.|.+...|..|++.| .+|.|+.|+++|.....|.
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~  116 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTL  116 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHH
Confidence            35678888888888887777666  22   334578999999999999999999999976 4799999999999999999


Q ss_pred             HHHhhhCCC
Q psy13389        446 EHVDKCHNL  454 (617)
Q Consensus       446 ~H~~~~H~~  454 (617)
                      .|+...|++
T Consensus       117 ~H~~~~h~~  125 (128)
T PHA00733        117 DHVCKKHNI  125 (128)
T ss_pred             HHHHHhcCc
Confidence            999998873

>PHA00733 hypothetical protein

Probab=99.04  E-value=2e-10  Score=97.09  Aligned_cols=82  Identities=18%  Similarity=0.475  Sum_probs=54.3

Q ss_pred             CCceecCCCCCcCCCHHHHHHH--H---HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhH
Q psy13389        260 SKRYLCTMCPKCFTRKDDLNRH--M---RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNL  334 (617)
Q Consensus       260 ~~~~~C~~C~~~f~~~~~L~~H--~---~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  334 (617)
                      .+++.|.+|.+.|.....|..|  +   ..+++.+||.|+.|++.|.+...|..|++.|  ..+|.|+.|++.|.....|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            4556666666666655544443  1   1233466777777777777777777777765  3467777777777777777


Q ss_pred             HHHHhhhcC
Q psy13389        335 YIHLKLQHG  343 (617)
Q Consensus       335 ~~H~~~h~~  343 (617)
                      ..|+...|+
T Consensus       116 ~~H~~~~h~  124 (128)
T PHA00733        116 LDHVCKKHN  124 (128)
T ss_pred             HHHHHHhcC
Confidence            777777665

>KOG3993|consensus

Probab=98.83  E-value=4.5e-10  Score=108.43  Aligned_cols=207  Identities=16%  Similarity=0.207  Sum_probs=99.3

Q ss_pred             ccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCccc-C-cccc-ccCCHHHHHHHHH
Q psy13389        235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC-S-VCFE-SFTQKALLNIHLR  311 (617)
Q Consensus       235 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C-~-~C~~-~f~~~~~l~~H~~  311 (617)
                      |.|..|...|.....|.+|.-.-.-...|+|+.|+|.|.-..+|..|.+-|.....-.= . .=.+ .-.+....+.=-+
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            66666666666666666664322222346666666666666666666665532210000 0 0000 0000000000000


Q ss_pred             H--hCCCCCccCCccccccCChhhHHHHHhhhcCCCCccCCCCCCCccCChhHHHHHhhhccCCCCcccCccCCcCCCch
Q psy13389        312 I--HTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKS  389 (617)
Q Consensus       312 ~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  389 (617)
                      .  -..+.-|.|.+|+++|.....|+.|+.+|+....-+=. =.  .|.....+.         --+.|..|+-.+....
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~-a~--~f~~s~~~~---------l~~~~~~~a~h~~a~~  415 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEK-AP--KFLLSRVIP---------LMHFNQAVATHSSASD  415 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhc-cc--Ccchhhccc---------cccccccccccccccc
Confidence            0  01123588999999999999999998887743211100 00  011110000         0123444444443332


Q ss_pred             hHHHHhhhhcC-CCccccccccccccChHhHHHHHHcC---CCCCCccccccccCchhHHHHHhhhCC
Q psy13389        390 VLKEHLRVSHN-VNPFKCDICFKLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVDKCHN  453 (617)
Q Consensus       390 ~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h---~~~~C~~C~~~f~~~~~l~~H~~~~H~  453 (617)
                      .--.+...+.+ ...-.|++|+-.+.++..--.+.+.-   ..|.|.+|..+|.+...|.+|+..+|.
T Consensus       416 ~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  416 SHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             ccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcCh
Confidence            22222211111 11234666665555554443443322   258888999999999999999988886

>PHA02768 hypothetical protein; Provisional

Probab=98.82  E-value=1.9e-09  Score=73.98  Aligned_cols=41  Identities=22%  Similarity=0.646  Sum_probs=24.6

Q ss_pred             cccccccccccChHhHHHHHHcCC-CCCCccccccccCchhH
Q psy13389        404 FKCDICFKLFTKKSNLRTHIKTHE-PIPCDKCPEIFEKKTDL  444 (617)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~~h~-~~~C~~C~~~f~~~~~l  444 (617)
                      |.|+.||+.|.+.++|..|+++|. +|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcCCcccCCcccceeccccee
Confidence            556666666666666666666665 66666666666555544

>KOG3993|consensus

Probab=98.81  E-value=9.9e-10  Score=106.14  Aligned_cols=159  Identities=13%  Similarity=0.131  Sum_probs=85.9

Q ss_pred             cccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCCCCcc-CC-CCCCCccCChhHHHHHhh
Q psy13389        291 FHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFK-CD-VCPNETFEKETQLSLHMR  368 (617)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-C~-~C~~~~f~~~~~l~~H~~  368 (617)
                      |.|.+|...|.....|.+|.-.-.----|+|+.|+|.|+-..||..|.+.|....--. -. .=.+.........+.-.+
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            6666666666666666666432111223777777777777777777777665321100 00 000000000000000000


Q ss_pred             --hccCCCCcccCccCCcCCCchhHHHHhhhhcCCC-----------------ccccccccccccChHhHHHHHHcCC--
Q psy13389        369 --TVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVN-----------------PFKCDICFKLFTKKSNLRTHIKTHE--  427 (617)
Q Consensus       369 --~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-----------------~~~C~~C~~~f~~~~~l~~H~~~h~--  427 (617)
                        ....+..|.|.+|+++|.+...|+.|+.+|+...                 .+.|..|.-.+.....--.+...+.  
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~s  427 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGS  427 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeecc
Confidence              0022347999999999999999999998887421                 1345555554444333333332232  


Q ss_pred             --CCCCccccccccCchhHHHHHh
Q psy13389        428 --PIPCDKCPEIFEKKTDLQEHVD  449 (617)
Q Consensus       428 --~~~C~~C~~~f~~~~~l~~H~~  449 (617)
                        -..|++|+-.+.++..--.|.+
T Consensus       428 ael~~pp~~~~ppsss~~sgg~~r  451 (500)
T KOG3993|consen  428 AELELPPYDGSPPSSSGSSGGYGR  451 (500)
T ss_pred             ccccCCCCCCCCcccCCCCCcccc
Confidence              2458888888877766555543

>PHA02768 hypothetical protein; Provisional

Probab=98.75  E-value=3.5e-09  Score=72.74  Aligned_cols=44  Identities=20%  Similarity=0.487  Sum_probs=36.5

Q ss_pred             CcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHH
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLR  420 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  420 (617)
                      .|.|+.||+.|.....|..|+++|+  ++|+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3788888888888888888888887  6888888888888777653

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.44  E-value=1.2e-07  Score=55.52  Aligned_cols=25  Identities=36%  Similarity=0.788  Sum_probs=17.2

Q ss_pred             hHHHHhhhhcCCCcccccccccccc
Q psy13389        390 VLKEHLRVSHNVNPFKCDICFKLFT  414 (617)
Q Consensus       390 ~l~~H~~~h~~~~~~~C~~C~~~f~  414 (617)
                      .|.+|+++|++++||.|++|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3666777777777777777777665

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.38  E-value=2.1e-07  Score=54.54  Aligned_cols=24  Identities=50%  Similarity=0.920  Sum_probs=12.8

Q ss_pred             HHHHHHHhCCCCCccCCccccccC
Q psy13389        306 LNIHLRIHTNSKPHACSICTESFS  329 (617)
Q Consensus       306 l~~H~~~h~~~~~~~C~~C~~~f~  329 (617)
                      |..|+++|++++||.|+.|+++|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            445555555555555555555553

...

>KOG1146|consensus

Probab=98.37  E-value=1.4e-07  Score=104.31  Aligned_cols=94  Identities=13%  Similarity=0.199  Sum_probs=75.8

Q ss_pred             cccccccccccChHhHHHHHHcCCCCCCccccccccCchhHHHHHhhhCCCCccccccccCCCCCCCCcccccCcccccc
Q psy13389        404 FKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPKEKSFNCSKCLNIV  483 (617)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~~h~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~k~f~C~~C~~~f  483 (617)
                      +.|..|++.|.....+. |+-.-++|.|..|...|.....|..|.++.-..-.........-+..+.-++| |.+|.-.|
T Consensus      1261 ~~c~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~ 1338 (1406)
T KOG1146|consen 1261 GECGAVDELLTPSFGIS-TLDVTHRYLCRQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLL 1338 (1406)
T ss_pred             chhhhccccccCcccee-ecccchhHHHHHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-chHHHhhc
Confidence            78999999999988888 88888899999999999999999999976544333333334444455556677 99999999


Q ss_pred             ccchhHHHHHhhhhcC
Q psy13389        484 RIPVEIKSLVEKLTSE  499 (617)
Q Consensus       484 ~~~~~l~~H~~~~~~~  499 (617)
                      ..+..|+.|++..+.+
T Consensus      1339 ~~~~alqihm~~~~~~ 1354 (1406)
T KOG1146|consen 1339 SGREALQIHMRSSAHR 1354 (1406)
T ss_pred             chhHHHHHHHHHhhhc
Confidence            9999999999976543

>PHA00732 hypothetical protein

Probab=98.30  E-value=4.5e-07  Score=69.09  Aligned_cols=45  Identities=27%  Similarity=0.509  Sum_probs=25.4

Q ss_pred             ccccccccccccChHhHHHHHH-cCCCCCCccccccccCchhHHHHHhh
Q psy13389        403 PFKCDICFKLFTKKSNLRTHIK-THEPIPCDKCPEIFEKKTDLQEHVDK  450 (617)
Q Consensus       403 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~C~~C~~~f~~~~~l~~H~~~  450 (617)
                      ||.|+.||+.|.+...|..|++ .|.++.|+.|++.|.   .|..|++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCCccCCCCCEeC---Chhhhhcc
Confidence            3555556666655556666655 355556666666665   35555543

>PHA00616 hypothetical protein

Probab=98.24  E-value=4.1e-07  Score=59.39  Aligned_cols=33  Identities=24%  Similarity=0.356  Sum_probs=18.1

Q ss_pred             CccCCccccccCChhhHHHHHhhhcCCCCccCC
Q psy13389        318 PHACSICTESFSQKSNLYIHLKLQHGVNPFKCD  350 (617)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  350 (617)
                      ||+|+.||+.|..+++|..|++.||+++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            355555555555555555555555555555443

>PHA00616 hypothetical protein

Probab=98.18  E-value=6.5e-07  Score=58.45  Aligned_cols=36  Identities=28%  Similarity=0.495  Sum_probs=29.8

Q ss_pred             CcccCccCCcCCCchhHHHHhhhhcCCCcccccccc
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICF  410 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  410 (617)
                      ||+|+.||+.|..++.|..|++.||+.+++.|+.=-
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y   36 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFY   36 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEE
Confidence            578888888888888888888888888888876543

>PHA00732 hypothetical protein

Probab=98.17  E-value=1.2e-06  Score=66.82  Aligned_cols=48  Identities=31%  Similarity=0.559  Sum_probs=36.0

Q ss_pred             CcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHHHHHHcCC
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHE  427 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  427 (617)
                      ||.|..|++.|.+...|+.|++.+|.  ++.|+.||+.|.   .|..|++++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--CCccCCCCCEeC---ChhhhhcccC
Confidence            57788888888888888888875332  357888888887   5778887664

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=98.05  E-value=2.9e-06  Score=73.09  Aligned_cols=84  Identities=13%  Similarity=0.192  Sum_probs=62.9

Q ss_pred             cCccccccccchhHHHHHhhhhcCCCCCccccc----ccccccccccceeeeccCCccchhhhhcccCcccccccccccc
Q psy13389        476 CSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYE----HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLN  551 (617)
Q Consensus       476 C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~----~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~  551 (617)
                      .-+-|++......|...+..    .+..+..++    +++++++.||||++||.+. |+|+++|++| |++|..+|... 
T Consensus        31 v~VvGrs~~vG~pla~lL~~----~gatV~~~~~~t~~l~~~v~~ADIVvsAtg~~-~~i~~~~ikp-Ga~Vidvg~~~-  103 (140)
T cd05212          31 VLVVGRSGIVGAPLQCLLQR----DGATVYSCDWKTIQLQSKVHDADVVVVGSPKP-EKVPTEWIKP-GATVINCSPTK-  103 (140)
T ss_pred             EEEECCCchHHHHHHHHHHH----CCCEEEEeCCCCcCHHHHHhhCCEEEEecCCC-CccCHHHcCC-CCEEEEcCCCc-
Confidence            34556666666666665553    234455555    6788999999999999999 9999999999 99999999875 


Q ss_pred             ccccchhhhhcCceEEEe
Q psy13389        552 HHSELDAAIYSHSSIFFD  569 (617)
Q Consensus       552 ~~~e~~~~~~~~~~~~~d  569 (617)
                         |.+++++.+|.+++=
T Consensus       104 ---~~~~~~~~~a~~~tP  118 (140)
T cd05212         104 ---LSGDDVKESASLYVP  118 (140)
T ss_pred             ---ccchhhHhhceEEcC
Confidence               446667777766653

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.81  E-value=2.5e-05  Score=55.24  Aligned_cols=52  Identities=19%  Similarity=0.346  Sum_probs=41.4

Q ss_pred             CCCCccccccccCchhHHHHHhhhCCCCccccccccCCCCCCCCcccccCccccccccchhHHHHHhhhh
Q psy13389        428 PIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPKEKSFNCSKCLNIVRIPVEIKSLVEKLT  497 (617)
Q Consensus       428 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~k~f~C~~C~~~f~~~~~l~~H~~~~~  497 (617)
                      .|.|++|++ ..+...|..|+...|..               ..+.+.||+|...+.  ..|.+|+...+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~---------------~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRS---------------ESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcC---------------CCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            489999999 56678999999998971               345799999998655  48888887665

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.80  E-value=2.2e-05  Score=55.57  Aligned_cols=48  Identities=33%  Similarity=0.630  Sum_probs=27.2

Q ss_pred             cccCccCCcCCCchhHHHHhhhhcCC--CccccccccccccChHhHHHHHHcC
Q psy13389        376 FKCSMCDEGFPKKSVLKEHLRVSHNV--NPFKCDICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       376 ~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~H~~~h  426 (617)
                      |.|++|++. .+...|..|....|..  +.+.|++|...+.  .+|..|+..+
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            667777773 4456677776654432  3466666665433  2555555543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG1146|consensus

Probab=97.70  E-value=1.4e-05  Score=89.16  Aligned_cols=72  Identities=28%  Similarity=0.461  Sum_probs=46.1

Q ss_pred             cccccCCHHHHHHHHH-hcCCCcceecCccccccCChHHHHHHHHHcc-------------------------CCCCccc
Q psy13389        128 CRFDFYVKREYNRHMK-IHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE-------------------------GIKPFQC  181 (617)
Q Consensus       128 C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------------------~~~~~~C  181 (617)
                      |+..+.....+..|+. .+.-.+.|+|+.|+..|.....|..||+.-+                         +.++|.|
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C  521 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPC  521 (1406)
T ss_pred             hhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccc
Confidence            3333344444444332 2333467888888888888888888888621                         1246777


Q ss_pred             CcCccccCChHHHHHHHH
Q psy13389        182 SVCSESFTQRSNLNIHLR  199 (617)
Q Consensus       182 ~~C~~~f~~~~~l~~H~~  199 (617)
                      ..|...+..+.+|-+|+.
T Consensus       522 ~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  522 RACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             eeeeeeeecchHHHHHHH
Confidence            777777777777777764

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.57  E-value=3.2e-05  Score=43.96  Aligned_cols=20  Identities=55%  Similarity=1.014  Sum_probs=8.6

Q ss_pred             ccccccccccChHhHHHHHH
Q psy13389        405 KCDICFKLFTKKSNLRTHIK  424 (617)
Q Consensus       405 ~C~~C~~~f~~~~~l~~H~~  424 (617)
                      .|+.|++.|.++..|..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHh
Confidence            34444444444444444443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.41  E-value=0.00011  Score=41.79  Aligned_cols=18  Identities=61%  Similarity=1.047  Sum_probs=6.8

Q ss_pred             CCccccccCChhhHHHHH
Q psy13389        321 CSICTESFSQKSNLYIHL  338 (617)
Q Consensus       321 C~~C~~~f~~~~~l~~H~  338 (617)
                      |+.|++.|.++..|..|+
T Consensus         3 C~~C~~~f~~~~~l~~H~   20 (23)
T PF00096_consen    3 CPICGKSFSSKSNLKRHM   20 (23)
T ss_dssp             ETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHH
Confidence            333333333333333333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.37  E-value=8.6e-05  Score=60.70  Aligned_cols=73  Identities=29%  Similarity=0.567  Sum_probs=19.4

Q ss_pred             cCCccccccCChhhHHHHHhhhcCCCCccCCCCCCCccCChhHHHHHhhhccCCCCcccCccCCcCCCchhHHHHhhhh
Q psy13389        320 ACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVS  398 (617)
Q Consensus       320 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  398 (617)
                      +|.+|+..|.+...|..|+...|+...-...     .+.....+..+++.. ....+.|.+|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~-----~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQK-----YLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Ccccccccccccccccccccccccccccccc-----ccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            5888999999999999998887765321111     122223333333321 122588888888888888888888764

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.36  E-value=9e-05  Score=60.56  Aligned_cols=68  Identities=24%  Similarity=0.415  Sum_probs=22.5

Q ss_pred             CCccccccccCchhHHHHHhhhCCCCcccccc-----c-cCCCCCCCCcccccCccccccccchhHHHHHhhhh
Q psy13389        430 PCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEE-----G-LDEFDAPKEKSFNCSKCLNIVRIPVEIKSLVEKLT  497 (617)
Q Consensus       430 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~-----~-~~~~~~~~~k~f~C~~C~~~f~~~~~l~~H~~~~~  497 (617)
                      +|.+|+..|.+...|..|+...|.+...+...     + +..+...-...+.|.+|++.|.+...|..|++...
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            47778888888888888887777654332111     1 11111112236999999999999999999999754

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.23  E-value=0.00017  Score=41.35  Aligned_cols=23  Identities=39%  Similarity=0.977  Sum_probs=10.5

Q ss_pred             cccCccCCcCCCchhHHHHhhhh
Q psy13389        376 FKCSMCDEGFPKKSVLKEHLRVS  398 (617)
Q Consensus       376 ~~C~~C~~~f~~~~~l~~H~~~h  398 (617)
                      |.|++|++.|.+...|+.|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34555555555555555555444

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.21  E-value=0.0002  Score=41.00  Aligned_cols=23  Identities=39%  Similarity=0.788  Sum_probs=10.4

Q ss_pred             ccCCccccccCChhhHHHHHhhh
Q psy13389        319 HACSICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~h  341 (617)
                      |.|++|++.|.+...|+.|++.+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34555555555555555555444

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.13  E-value=0.00013  Score=68.62  Aligned_cols=26  Identities=31%  Similarity=0.727  Sum_probs=21.9

Q ss_pred             CCCCcccCc--cCCcCCCchhHHHHhhh
Q psy13389        372 GVKPFKCSM--CDEGFPKKSVLKEHLRV  397 (617)
Q Consensus       372 ~~~~~~C~~--C~~~f~~~~~l~~H~~~  397 (617)
                      ++|||+|++  |+|+++....|+-|+.-
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lh  373 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLH  373 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhc
Confidence            458999987  99999999999999764

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.08  E-value=0.00035  Score=41.44  Aligned_cols=23  Identities=48%  Similarity=0.883  Sum_probs=10.7

Q ss_pred             cccccccccccChHhHHHHHHcC
Q psy13389        404 FKCDICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~~h  426 (617)
                      |.|..|++.|.+...|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            44444444444444444444443

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.02  E-value=0.00039  Score=65.44  Aligned_cols=23  Identities=39%  Similarity=0.904  Sum_probs=14.9

Q ss_pred             ccccCCC--CccccCChHHHHHHHH
Q psy13389         55 KKFKCNI--CPKRYARKNRLTNHLR   77 (617)
Q Consensus        55 ~~~~C~~--C~~~f~~~~~l~~H~~   77 (617)
                      |||+|++  |.|.|.+...|+-|+.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhh
Confidence            5666665  6666666666666654

>KOG2231|consensus

Probab=97.01  E-value=0.0012  Score=70.38  Aligned_cols=48  Identities=35%  Similarity=0.743  Sum_probs=25.9

Q ss_pred             cCCccccccCChhhHHHHHhhhcCCCCccCCCCC-----CCccCChhHHHHHhhhcc
Q psy13389        320 ACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCP-----NETFEKETQLSLHMRTVH  371 (617)
Q Consensus       320 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~-----~~~f~~~~~l~~H~~~h~  371 (617)
                      .|..|...|-....|.+|++.+|    |.|..|.     +..|.....|..|.+..|
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            46666666666666666666555    3444442     223444455555555544

>KOG2231|consensus

Probab=97.01  E-value=0.0016  Score=69.38  Aligned_cols=17  Identities=29%  Similarity=0.726  Sum_probs=9.5

Q ss_pred             cCCCCcccCChHHHHHHH
Q psy13389         97 CSQCPKTFVDKWHLNRHL  114 (617)
Q Consensus        97 C~~C~~~f~~~~~l~~H~  114 (617)
                      |..| -.|.+...|+.|+
T Consensus       118 ~~~c-~~~~s~~~Lk~H~  134 (669)
T KOG2231|consen  118 CLHC-TEFKSVENLKNHM  134 (669)
T ss_pred             Cccc-cchhHHHHHHHHH
Confidence            4555 4455555666665

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.00  E-value=0.00039  Score=41.22  Aligned_cols=25  Identities=32%  Similarity=0.574  Sum_probs=15.2

Q ss_pred             CccCCccccccCChhhHHHHHhhhc
Q psy13389        318 PHACSICTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~h~  342 (617)
                      ||+|..|++.|.+...|..|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666665554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.55  E-value=0.0019  Score=43.26  Aligned_cols=31  Identities=35%  Similarity=0.693  Sum_probs=15.7

Q ss_pred             CCCccCCccccccCChhhHHHHHhhhcCCCC
Q psy13389        316 SKPHACSICTESFSQKSNLYIHLKLQHGVNP  346 (617)
Q Consensus       316 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  346 (617)
                      +.|..|++|+..+.+..+|++|+.+.|+.+|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            4456666666666666666666666665544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.24  E-value=0.0034  Score=42.07  Aligned_cols=32  Identities=25%  Similarity=0.598  Sum_probs=21.3

Q ss_pred             CCCCcccCccCCcCCCchhHHHHhhhhcCCCc
Q psy13389        372 GVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNP  403 (617)
Q Consensus       372 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  403 (617)
                      .+.|-.|++|+..+....+|++|+...|+.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            35678888888888888888888888887765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.14  E-value=0.0033  Score=36.52  Aligned_cols=20  Identities=35%  Similarity=0.906  Sum_probs=9.4

Q ss_pred             CCccccccccCchhHHHHHh
Q psy13389        430 PCDKCPEIFEKKTDLQEHVD  449 (617)
Q Consensus       430 ~C~~C~~~f~~~~~l~~H~~  449 (617)
                      .|+.|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHH
Confidence            34444444444444444444

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.10  E-value=0.0071  Score=57.86  Aligned_cols=73  Identities=29%  Similarity=0.615  Sum_probs=56.5

Q ss_pred             ccCccCCcCCCchhHHHHhhhhcCCCccccccccc-------cccChHhHHHHHHcCCCCCCcc--cc----ccccCchh
Q psy13389        377 KCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFK-------LFTKKSNLRTHIKTHEPIPCDK--CP----EIFEKKTD  443 (617)
Q Consensus       377 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~h~~~~C~~--C~----~~f~~~~~  443 (617)
                      .|..|...|.+-..|..|+|..|.    .|.+|++       -|.+...|..|.+.- .|.|.+  |-    ..|.....
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~-hy~ct~qtc~~~k~~vf~~~~e  296 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNA-HYCCTFQTCRVGKCYVFPYHTE  296 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcC-ceEEEEEEEecCcEEEeccHHH
Confidence            599999999999999999998773    3666654       477888899997643 355533  42    57899999


Q ss_pred             HHHHHhhhCCC
Q psy13389        444 LQEHVDKCHNL  454 (617)
Q Consensus       444 l~~H~~~~H~~  454 (617)
                      |+.|+.+.|+.
T Consensus       297 l~~h~~~~h~~  307 (493)
T COG5236         297 LLEHLTRFHKV  307 (493)
T ss_pred             HHHHHHHHhhc
Confidence            99999999973

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.85  E-value=0.015  Score=55.74  Aligned_cols=22  Identities=36%  Similarity=0.859  Sum_probs=12.9

Q ss_pred             cCCCCccccCChhHHHHHHhhc
Q psy13389        236 LCSMCAKCFSRKDDLNRHMKIH  257 (617)
Q Consensus       236 ~C~~C~~~f~~~~~L~~H~~~h  257 (617)
                      .|..|...|.+-..|..|++..
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~  243 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLR  243 (493)
T ss_pred             hhhhccceecChHHHHHHHHhh
Confidence            3666666666666666666543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.84  E-value=0.0051  Score=35.13  Aligned_cols=23  Identities=52%  Similarity=0.674  Sum_probs=10.8

Q ss_pred             ccCCccccccCChhhHHHHHhhhc
Q psy13389        319 HACSICTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~h~  342 (617)
                      |+|+.|+.... ...|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            34555555554 555555555544

>smart00355 ZnF_C2H2 zinc finger

Probab=95.84  E-value=0.0084  Score=34.73  Aligned_cols=18  Identities=33%  Similarity=0.700  Sum_probs=6.8

Q ss_pred             cCccccccCCHHHHHHHH
Q psy13389        293 CSVCFESFTQKALLNIHL  310 (617)
Q Consensus       293 C~~C~~~f~~~~~l~~H~  310 (617)
                      |+.|++.|.+...|..|+
T Consensus         3 C~~C~~~f~~~~~l~~H~   20 (26)
T smart00355        3 CPECGKVFKSKSALKEHM   20 (26)
T ss_pred             CCCCcchhCCHHHHHHHH
Confidence            333333333333333333

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.79  E-value=0.0046  Score=35.73  Aligned_cols=21  Identities=48%  Similarity=1.053  Sum_probs=10.5

Q ss_pred             cccccccccccChHhHHHHHH
Q psy13389        404 FKCDICFKLFTKKSNLRTHIK  424 (617)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~  424 (617)
                      |.|.+|++.|.+...|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345555555555555555544

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.64  E-value=0.0028  Score=66.46  Aligned_cols=68  Identities=13%  Similarity=0.170  Sum_probs=53.0

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCcc----ccccccccccccccchhhh--hcCce-EEEecchhhhc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDA----HINAVGAGLNHHSELDAAI--YSHSS-IFFDSEAAARG  576 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~----~v~~~g~~~~~~~e~~~~~--~~~~~-~~~d~~~~~~~  576 (617)
                      .+..+++.++|||++||+++.|++..+|+++ ++    +...++.+..-.+++++++  +..+. +.+|++.++..
T Consensus       234 ~~~~~~l~~aDvVI~aT~s~~~~i~~~~l~~-~~~~~~~~~~vviDla~Prdid~~v~~l~~v~l~~vDdl~~~~~  308 (423)
T PRK00045        234 DELPEALAEADIVISSTGAPHPIIGKGMVER-ALKARRHRPLLLVDLAVPRDIEPEVGELPGVYLYDVDDLQEIVE  308 (423)
T ss_pred             HHHHHHhccCCEEEECCCCCCcEEcHHHHHH-HHhhccCCCeEEEEeCCCCCCcccccccCCeEEEEHHHHHHHHH
Confidence            4566778899999999999999999999977 43    4455666666668999988  44554 77898887764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.64  E-value=0.0062  Score=34.78  Aligned_cols=21  Identities=43%  Similarity=0.683  Sum_probs=8.1

Q ss_pred             ccCccCCcCCCchhHHHHhhhh
Q psy13389        377 KCSMCDEGFPKKSVLKEHLRVS  398 (617)
Q Consensus       377 ~C~~C~~~f~~~~~l~~H~~~h  398 (617)
                      +|+.|+.... +..|.+|++.+
T Consensus         2 ~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    2 KCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             E-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCcCC-HHHHHHHHHhh
Confidence            3444444443 44444444443

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.62  E-value=0.0028  Score=66.23  Aligned_cols=68  Identities=16%  Similarity=0.145  Sum_probs=52.8

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCccc---cccccccccccccchhhh--hcCce-EEEecchhhhc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAH---INAVGAGLNHHSELDAAI--YSHSS-IFFDSEAAARG  576 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~---v~~~g~~~~~~~e~~~~~--~~~~~-~~~d~~~~~~~  576 (617)
                      .+..+++.++|||++||+++.|++..+|+++ +..   ...++.+.+-.+++++++  +..+. +.+|++.++..
T Consensus       232 ~~l~~~l~~aDvVi~aT~s~~~ii~~e~l~~-~~~~~~~~~~viDla~Prdid~~v~~l~~v~l~~vDdl~~~~~  305 (417)
T TIGR01035       232 EDLEEYLAEADIVISSTGAPHPIVSKEDVER-ALRERTRPLFIIDIAVPRDVDPAVARLEGVFLYDVDDLQPVVE  305 (417)
T ss_pred             HHHHHHHhhCCEEEECCCCCCceEcHHHHHH-HHhcCCCCeEEEEeCCCCCCChhhcCcCCeEEEEHHHHHHHHH
Confidence            4566778899999999999999999999976 332   344566666668999998  66675 78898877664

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>KOG2785|consensus

Probab=95.40  E-value=0.04  Score=54.19  Aligned_cols=71  Identities=18%  Similarity=0.247  Sum_probs=46.2

Q ss_pred             CcccCccCCcCCCchhHHHHhhhhcCCCcccccccccc-ccChHhHHHHH--HcCCCCCCcccc---ccccCchhHHHHH
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKL-FTKKSNLRTHI--KTHEPIPCDKCP---EIFEKKTDLQEHV  448 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-f~~~~~l~~H~--~~h~~~~C~~C~---~~f~~~~~l~~H~  448 (617)
                      |-.|-.|++.|++-..-..||..+||-..=     +.. .+....|..=+  ++-..|.|-.|+   +.|.+....+.||
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIP-----dreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM  240 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIP-----DREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHM  240 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCC-----chHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHH
Confidence            466888888888888888888887763210     000 12222222222  333468899998   9999999999999


Q ss_pred             hh
Q psy13389        449 DK  450 (617)
Q Consensus       449 ~~  450 (617)
                      ..
T Consensus       241 ~~  242 (390)
T KOG2785|consen  241 RD  242 (390)
T ss_pred             hh
Confidence            75

>KOG2482|consensus

Probab=95.40  E-value=0.029  Score=53.89  Aligned_cols=141  Identities=23%  Similarity=0.383  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHhCC-CCCccCCccccccC-ChhhHHHHHhhhcCCCCccCCCCCCCccCChhHHHHHhhhccCCCCcccCc
Q psy13389        303 KALLNIHLRIHTN-SKPHACSICTESFS-QKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSM  380 (617)
Q Consensus       303 ~~~l~~H~~~h~~-~~~~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~C~~C~~~~f~~~~~l~~H~~~h~~~~~~~C~~  380 (617)
                      +..|..|++--.+ ....+|-.|...+. +++..-.|+-..|+-+.=.   -.+  ...-..|-.|++...  ..+.|-+
T Consensus       128 ~eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGl---pDn--iVyvnelLehLkekL--~r~~CLy  200 (423)
T KOG2482|consen  128 KEALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGL---PDN--IVYVNELLEHLKEKL--ERLRCLY  200 (423)
T ss_pred             HHHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCC---Ccc--eeeHHHHHHHHHHHH--hhheeee
Confidence            4556666654322 23457888887654 5666777876666532100   000  111122333333211  2356666


Q ss_pred             cCCcCCCchhHHHHhhhhc--CC----------------------------------------------------Cc--c
Q psy13389        381 CDEGFPKKSVLKEHLRVSH--NV----------------------------------------------------NP--F  404 (617)
Q Consensus       381 C~~~f~~~~~l~~H~~~h~--~~----------------------------------------------------~~--~  404 (617)
                      |.+.|+.+..|+.||+...  ..                                                    .+  -
T Consensus       201 CekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v  280 (423)
T KOG2482|consen  201 CEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSV  280 (423)
T ss_pred             eccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccce
Confidence            6666666666666665321  10                                                    11  3


Q ss_pred             ccccccccccChHhHHHHHHcCC------------------------------CCCCccccccccCchhHHHHHhh
Q psy13389        405 KCDICFKLFTKKSNLRTHIKTHE------------------------------PIPCDKCPEIFEKKTDLQEHVDK  450 (617)
Q Consensus       405 ~C~~C~~~f~~~~~l~~H~~~h~------------------------------~~~C~~C~~~f~~~~~l~~H~~~  450 (617)
                      .|-.|....-+...|..||++-+                              .-.|-.|...|.....|..||..
T Consensus       281 ~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  281 VCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             EEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            68888888888888888887532                              12488889999999999999875

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.32  E-value=0.0098  Score=34.31  Aligned_cols=18  Identities=39%  Similarity=0.866  Sum_probs=7.7

Q ss_pred             cCccccccCCHHHHHHHH
Q psy13389        293 CSVCFESFTQKALLNIHL  310 (617)
Q Consensus       293 C~~C~~~f~~~~~l~~H~  310 (617)
                      |.+|++.|.+...|..|+
T Consensus         3 C~~C~~~f~s~~~~~~H~   20 (25)
T PF12874_consen    3 CDICNKSFSSENSLRQHL   20 (25)
T ss_dssp             ETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCcCCHHHHHHHH
Confidence            444444444444444443

>PRK04860 hypothetical protein; Provisional

Probab=95.11  E-value=0.0098  Score=52.40  Aligned_cols=38  Identities=26%  Similarity=0.699  Sum_probs=28.3

Q ss_pred             CcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccCh
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKK  416 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  416 (617)
                      +|.|. |+.   ....+++|.++|.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            57787 776   666777888888888888888887776543

>PRK04860 hypothetical protein; Provisional

Probab=94.89  E-value=0.015  Score=51.29  Aligned_cols=24  Identities=29%  Similarity=0.567  Sum_probs=10.7

Q ss_pred             HHHHHHHhcCCCCCcccCcccccc
Q psy13389        277 DLNRHMRNHDGLKPFHCSVCFESF  300 (617)
Q Consensus       277 ~L~~H~~~h~~~~~~~C~~C~~~f  300 (617)
                      .+++|.++|.++++|.|..|+..|
T Consensus       130 ~~rrH~ri~~g~~~YrC~~C~~~l  153 (160)
T PRK04860        130 TVRRHNRVVRGEAVYRCRRCGETL  153 (160)
T ss_pred             HHHHHHHHhcCCccEECCCCCcee
Confidence            344444444444444444444443

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=94.85  E-value=0.014  Score=52.74  Aligned_cols=39  Identities=21%  Similarity=0.116  Sum_probs=34.9

Q ss_pred             cccccccccceeeeccCCccchhhhhcccCcccccccccc
Q psy13389        510 GEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG  549 (617)
Q Consensus       510 ~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~  549 (617)
                      ..+.++.|||||+|+....-.+..+|++| |+.|.-||..
T Consensus       120 l~~~~~~ADIVIsAvG~~~~~i~~d~ik~-GavVIDVGi~  158 (197)
T cd01079         120 TLDCLSQSDVVITGVPSPNYKVPTELLKD-GAICINFASI  158 (197)
T ss_pred             HHHHhhhCCEEEEccCCCCCccCHHHcCC-CcEEEEcCCC
Confidence            44678999999999988886699999999 9999999987

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.74  E-value=0.0082  Score=63.80  Aligned_cols=139  Identities=27%  Similarity=0.415  Sum_probs=78.3

Q ss_pred             CCcccCccccccCCHHHHHHHHH--HhCCC--CCccCC--ccccccCChhhHHHHHhhhcCCCCccCCCCCCC-ccCChh
Q psy13389        289 KPFHCSVCFESFTQKALLNIHLR--IHTNS--KPHACS--ICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNE-TFEKET  361 (617)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-~f~~~~  361 (617)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|...|.+..++.+..-... .+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            35666666666666666666666  56666  666666  566666666666666666666665554332210 011000


Q ss_pred             -----HHHHHhhhccCCCCcccC--ccCCcCCCchhHHHHhhhhcCCC--ccccccccccccChHhHHHHHHcCC
Q psy13389        362 -----QLSLHMRTVHGVKPFKCS--MCDEGFPKKSVLKEHLRVSHNVN--PFKCDICFKLFTKKSNLRTHIKTHE  427 (617)
Q Consensus       362 -----~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~  427 (617)
                           ..............+.+.  .|...+.....+..|...|-...  .+.+..|.+.|.....+..|++.|.
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHT  442 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccc
Confidence                 011111111222334443  26666666666666666665444  4566677777777777777777775

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.72  E-value=0.01  Score=63.13  Aligned_cols=148  Identities=26%  Similarity=0.473  Sum_probs=81.6

Q ss_pred             CcccCCCCccccCChhHHHHHHh--hccCC--CceecC--CCCCcCCCHHHHHHHHHhcCCCCCcccCc--cccccCCHH
Q psy13389        233 KPFLCSMCAKCFSRKDDLNRHMK--IHEGS--KRYLCT--MCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKA  304 (617)
Q Consensus       233 ~~~~C~~C~~~f~~~~~L~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~  304 (617)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|...|.+..++.+..  |...+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            35667777777777777777777  67666  677777  67777777777777777776666665543  333332222


Q ss_pred             HH-----HHHHHHhCCCCCccCCc--cccccCChhhHHHHHhhhcCCC--CccCCCCCCCccCChhHHHHHhhhccCCCC
Q psy13389        305 LL-----NIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGVN--PFKCDVCPNETFEKETQLSLHMRTVHGVKP  375 (617)
Q Consensus       305 ~l-----~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~~f~~~~~l~~H~~~h~~~~~  375 (617)
                      .-     ......-.....+.+..  |...+.....+..|...+-...  .+.+..|.+ .+.....+..|++.+....+
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  446 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSK-SFNRHYNLIPHKKIHTNHAP  446 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchh-hccCcccccccccccccCCc
Confidence            21     01111111222333332  5555566666666655555444  344555655 55556666666666665555


Q ss_pred             cccCcc
Q psy13389        376 FKCSMC  381 (617)
Q Consensus       376 ~~C~~C  381 (617)
                      +.|..+
T Consensus       447 ~~~~~~  452 (467)
T COG5048         447 LLCSIL  452 (467)
T ss_pred             eeeccc
Confidence            444433

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.67  E-value=0.011  Score=34.93  Aligned_cols=21  Identities=43%  Similarity=0.956  Sum_probs=10.7

Q ss_pred             cccccccccccChHhHHHHHH
Q psy13389        404 FKCDICFKLFTKKSNLRTHIK  424 (617)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~  424 (617)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            445555555555555555544

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.28  E-value=0.014  Score=34.42  Aligned_cols=22  Identities=36%  Similarity=0.865  Sum_probs=18.3

Q ss_pred             cccCccCCcCCCchhHHHHhhh
Q psy13389        376 FKCSMCDEGFPKKSVLKEHLRV  397 (617)
Q Consensus       376 ~~C~~C~~~f~~~~~l~~H~~~  397 (617)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888888764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=93.50  E-value=0.078  Score=51.02  Aligned_cols=163  Identities=21%  Similarity=0.348  Sum_probs=102.1

Q ss_pred             hhHHHHHhhhcCC-CCccCCCCCCCccCChhHHHHHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccccc
Q psy13389        332 SNLYIHLKLQHGV-NPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICF  410 (617)
Q Consensus       332 ~~l~~H~~~h~~~-~~~~C~~C~~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  410 (617)
                      ..|.+|++.-.+. ...+|-.|.......++..-.|+...|+-..=.    +-....-..|..|++..-  ..+.|-.|.
T Consensus       129 eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGl----pDniVyvnelLehLkekL--~r~~CLyCe  202 (423)
T KOG2482|consen  129 EALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGL----PDNIVYVNELLEHLKEKL--ERLRCLYCE  202 (423)
T ss_pred             HHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCC----CcceeeHHHHHHHHHHHH--hhheeeeec
Confidence            3455555443221 234577777655566666666665444311000    011222355666665432  347899999


Q ss_pred             ccccChHhHHHHHHc--CC---C------------------------------------------------------CCC
Q psy13389        411 KLFTKKSNLRTHIKT--HE---P------------------------------------------------------IPC  431 (617)
Q Consensus       411 ~~f~~~~~l~~H~~~--h~---~------------------------------------------------------~~C  431 (617)
                      +.|..+..|+.||+.  |.   |                                                      ..|
T Consensus       203 kifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~C  282 (423)
T KOG2482|consen  203 KIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVC  282 (423)
T ss_pred             cccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEE
Confidence            999999999999973  21   0                                                      479


Q ss_pred             ccccccccCchhHHHHHhhhCCCCccccccc--cCCC--------CCCCCcccccCccccccccchhHHHHHhhhhcCC
Q psy13389        432 DKCPEIFEKKTDLQEHVDKCHNLHEEDEEEG--LDEF--------DAPKEKSFNCSKCLNIVRIPVEIKSLVEKLTSEG  500 (617)
Q Consensus       432 ~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~--~~~~--------~~~~~k~f~C~~C~~~f~~~~~l~~H~~~~~~~~  500 (617)
                      -+|...+.+...|.+||..+|.+....-...  +..+        .....+.-.|..|.-.|..+..|..|+......+
T Consensus       283 LfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~k~l~  361 (423)
T KOG2482|consen  283 LFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVEDKHLS  361 (423)
T ss_pred             EeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccccccc
Confidence            9999999999999999999997443322211  1111        0111234578999999999999999988655433

>TIGR00622 ssl1 transcription factor ssl1

Probab=92.35  E-value=0.27  Score=39.98  Aligned_cols=95  Identities=22%  Similarity=0.427  Sum_probs=50.4

Q ss_pred             CCccCCccccccCChhhHHHHHhhhc--CCCCccCCCCCCCccCChhHHHHHhhhccCCCCcccCccCCcCCCchhHHHH
Q psy13389        317 KPHACSICTESFSQKSNLYIHLKLQH--GVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEH  394 (617)
Q Consensus       317 ~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  394 (617)
                      -|-.|+.|+-+..+...|.+-.  ||  ..++|.          .- .+.      .....-.|--|...|........ 
T Consensus        14 LP~~CpiCgLtLVss~HLARSy--HHLfPl~~f~----------ev-~~~------~~~~~~~C~~C~~~f~~~~~~~~-   73 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSY--HHLFPLKAFQ----------EI-PLE------EYNGSRFCFGCQGPFPKPPVSPF-   73 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhh--hccCCCcccc----------cc-ccc------ccCCCCcccCcCCCCCCcccccc-
Confidence            4677888888777777776542  33  112221          00 000      00111247778887765431110 


Q ss_pred             hhhhcCCCccccccccccccChHhHHHHHHcCCCCCCcccc
Q psy13389        395 LRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCP  435 (617)
Q Consensus       395 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~C~~C~  435 (617)
                       ..-.....|.|+.|...|=..-+.-.|...|.   |+.|.
T Consensus        74 -~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~---CPGC~  110 (112)
T TIGR00622        74 -DELKDSHRYVCAVCKNVFCVDCDVFVHESLHC---CPGCI  110 (112)
T ss_pred             -cccccccceeCCCCCCccccccchhhhhhccC---CcCCC
Confidence             00122345778888877777777777776663   55554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=91.93  E-value=0.089  Score=51.45  Aligned_cols=40  Identities=30%  Similarity=0.511  Sum_probs=34.9

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCcccccccccc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG  549 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~  549 (617)
                      .+.++.++.|||||+|+.- ..++..+|++| |+.|.-+|..
T Consensus       202 ~nl~~~~~~ADIvv~AvGk-~~~i~~~~vk~-gavVIDvGin  241 (299)
T PLN02516        202 PDPESIVREADIVIAAAGQ-AMMIKGDWIKP-GAAVIDVGTN  241 (299)
T ss_pred             CCHHHHHhhCCEEEEcCCC-cCccCHHHcCC-CCEEEEeecc
Confidence            3466788999999999855 57999999999 9999999986

>KOG4173|consensus

Probab=91.83  E-value=0.04  Score=48.90  Aligned_cols=87  Identities=17%  Similarity=0.429  Sum_probs=43.8

Q ss_pred             ccccc--ccccccChHhHHHHHHcCCCCCCccccccccCchhHHHHHhhhCCCCccccccccCCCCCCCCcccccC--cc
Q psy13389        404 FKCDI--CFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFDAPKEKSFNCS--KC  479 (617)
Q Consensus       404 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~k~f~C~--~C  479 (617)
                      |.|++  |...|.+...+..|..+-+.-.|.+|.+.|.+...|..|+...|-       .-.+.....|...|.|-  .|
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~sCs~C~r~~Pt~hLLd~HI~E~HD-------s~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGNSCSFCKRAFPTGHLLDAHILEWHD-------SLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccchhHHHHHhCCchhhhhHHHHHHHH-------HHHHHHHHcCccHHHHHHHhh
Confidence            44554  445555555555555444444566666666666666666555442       00001111234455663  36


Q ss_pred             ccccccchhHHHHHhhhh
Q psy13389        480 LNIVRIPVEIKSLVEKLT  497 (617)
Q Consensus       480 ~~~f~~~~~l~~H~~~~~  497 (617)
                      +..|.+.....+|+-+++
T Consensus       153 t~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhhhHHHHhc
Confidence            666666666666655544

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.71  E-value=0.13  Score=29.63  Aligned_cols=18  Identities=33%  Similarity=0.683  Sum_probs=8.2

Q ss_pred             ccccccccccChHhHHHHH
Q psy13389        405 KCDICFKLFTKKSNLRTHI  423 (617)
Q Consensus       405 ~C~~C~~~f~~~~~l~~H~  423 (617)
                      .|+.||+.| ....|.+|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            344444444 334444444

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.20  E-value=0.16  Score=29.22  Aligned_cols=21  Identities=29%  Similarity=0.697  Sum_probs=18.5

Q ss_pred             CCCccccccccCchhHHHHHhh
Q psy13389        429 IPCDKCPEIFEKKTDLQEHVDK  450 (617)
Q Consensus       429 ~~C~~C~~~f~~~~~l~~H~~~  450 (617)
                      .+|+.||+.| ....|.+|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 88899999865

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=91.05  E-value=0.091  Score=46.49  Aligned_cols=42  Identities=29%  Similarity=0.445  Sum_probs=30.0

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCcccccccccccc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLN  551 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~  551 (617)
                      .+.++.++.|||||+|+.. .-+++.+|++| |+.|.-+|....
T Consensus        71 ~~l~~~~~~ADIVVsa~G~-~~~i~~~~ik~-gavVIDvG~~~~  112 (160)
T PF02882_consen   71 KNLQEITRRADIVVSAVGK-PNLIKADWIKP-GAVVIDVGINYV  112 (160)
T ss_dssp             SSHHHHHTTSSEEEE-SSS-TT-B-GGGS-T-TEEEEE--CEEE
T ss_pred             CcccceeeeccEEeeeecc-ccccccccccC-CcEEEecCCccc
Confidence            3567888999999999965 44689999999 999999999743

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.22  E-value=0.18  Score=31.65  Aligned_cols=20  Identities=30%  Similarity=0.783  Sum_probs=10.2

Q ss_pred             cccccccccccChHhHHHHH
Q psy13389        404 FKCDICFKLFTKKSNLRTHI  423 (617)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~  423 (617)
                      |.|.+|++.|.+...+..|+
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~   23 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHL   23 (35)
T ss_pred             eEccccCCccCCHHHHHHHH
Confidence            44555555555555555554

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2785|consensus

Probab=89.71  E-value=0.39  Score=47.47  Aligned_cols=27  Identities=15%  Similarity=0.273  Sum_probs=23.1

Q ss_pred             ccccCCCCccccCChHHHHHHHHhhcC
Q psy13389         55 KKFKCNICPKRYARKNRLTNHLRTHEA   81 (617)
Q Consensus        55 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   81 (617)
                      -|-.|-+|++.+.+...-..||..++.
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~Hg  191 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHG  191 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccC
Confidence            356799999999999999999988763

>TIGR00622 ssl1 transcription factor ssl1

Probab=89.56  E-value=0.56  Score=38.17  Aligned_cols=76  Identities=21%  Similarity=0.363  Sum_probs=47.7

Q ss_pred             CcccCccCCcCCCchhHHHHhhhhc--CCC------------ccccccccccccChHhHHHH-HHcCCCCCCcccccccc
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSH--NVN------------PFKCDICFKLFTKKSNLRTH-IKTHEPIPCDKCPEIFE  439 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~~------------~~~C~~C~~~f~~~~~l~~H-~~~h~~~~C~~C~~~f~  439 (617)
                      |-.|++|+-+..+...|.+-.  ||  ..+            .-.|--|...|........= +..-..|.|+.|...|-
T Consensus        15 P~~CpiCgLtLVss~HLARSy--HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~y~C~~C~~~FC   92 (112)
T TIGR00622        15 PVECPICGLTLILSTHLARSY--HHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFDELKDSHRYVCAVCKNVFC   92 (112)
T ss_pred             CCcCCcCCCEEeccchHHHhh--hccCCCcccccccccccCCCCcccCcCCCCCCcccccccccccccceeCCCCCCccc
Confidence            455666666665555555431  21  111            12499999999765321100 12234799999999999


Q ss_pred             CchhHHHHHhhhCC
Q psy13389        440 KKTDLQEHVDKCHN  453 (617)
Q Consensus       440 ~~~~l~~H~~~~H~  453 (617)
                      -.-++-.|... |+
T Consensus        93 ~dCD~fiHe~L-h~  105 (112)
T TIGR00622        93 VDCDVFVHESL-HC  105 (112)
T ss_pred             cccchhhhhhc-cC
Confidence            99999999876 65

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>smart00451 ZnF_U1 U1-like zinc finger

Probab=89.47  E-value=0.25  Score=31.03  Aligned_cols=23  Identities=26%  Similarity=0.678  Sum_probs=20.3

Q ss_pred             CcccCccCCcCCCchhHHHHhhh
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRV  397 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~  397 (617)
                      +|.|.+|++.|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=89.39  E-value=0.14  Score=45.63  Aligned_cols=79  Identities=27%  Similarity=0.538  Sum_probs=52.1

Q ss_pred             ceecCC--CCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHh----------CCCCCccCCc--cccc
Q psy13389        262 RYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIH----------TNSKPHACSI--CTES  327 (617)
Q Consensus       262 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h----------~~~~~~~C~~--C~~~  327 (617)
                      .|.|++  |...|........|..+-++.   .|..|.+.|.+...|..|+.-.          -|...|+|-.  |+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            455654  556666666666666554443   5777777777777777776432          2344577754  8888


Q ss_pred             cCChhhHHHHHhhhcC
Q psy13389        328 FSQKSNLYIHLKLQHG  343 (617)
Q Consensus       328 f~~~~~l~~H~~~h~~  343 (617)
                      |.+...-+.|+-..|.
T Consensus       156 FkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  156 FKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhHHHHhcc
Confidence            8888888888766654

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.07  E-value=0.16  Score=49.50  Aligned_cols=40  Identities=23%  Similarity=0.311  Sum_probs=35.0

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+.... ++.++|++| |+.|.-+|...
T Consensus       194 ~l~~~~~~ADIvI~AvG~p~-~i~~~~ik~-gavVIDvGi~~  233 (284)
T PRK14190        194 NLAELTKQADILIVAVGKPK-LITADMVKE-GAVVIDVGVNR  233 (284)
T ss_pred             hHHHHHHhCCEEEEecCCCC-cCCHHHcCC-CCEEEEeeccc
Confidence            45678899999999997666 799999999 99999999874

>KOG2893|consensus

Probab=88.95  E-value=0.11  Score=47.22  Aligned_cols=41  Identities=34%  Similarity=0.787  Sum_probs=31.8

Q ss_pred             cCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHHHH
Q psy13389        378 CSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTH  422 (617)
Q Consensus       378 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  422 (617)
                      |.+|++.|....-|.+|++..|    |+|.+|-|...+--.|..|
T Consensus        13 cwycnrefddekiliqhqkakh----fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH----FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc----ceeeeehhhhccCCCceee
Confidence            8888888888888888887654    8888887776666666655

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=88.94  E-value=0.18  Score=49.10  Aligned_cols=40  Identities=30%  Similarity=0.306  Sum_probs=34.7

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|++.. -++..+|++| |+.|..+|...
T Consensus       194 ~l~~~~~~ADIVV~avG~~-~~i~~~~ik~-gavVIDVGin~  233 (285)
T PRK14189        194 DLAAHTRQADIVVAAVGKR-NVLTADMVKP-GATVIDVGMNR  233 (285)
T ss_pred             CHHHHhhhCCEEEEcCCCc-CccCHHHcCC-CCEEEEccccc
Confidence            4667889999999999854 4799999999 99999999863

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=88.92  E-value=0.17  Score=45.46  Aligned_cols=39  Identities=23%  Similarity=0.298  Sum_probs=34.7

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCcccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG  549 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~  549 (617)
                      ...+.+..|||||+||++.. +|..+|+++ |+.|.-+|..
T Consensus        80 ~l~~~l~~aDiVIsat~~~~-ii~~~~~~~-~~viIDla~p  118 (168)
T cd01080          80 NLKEHTKQADIVIVAVGKPG-LVKGDMVKP-GAVVIDVGIN  118 (168)
T ss_pred             hHHHHHhhCCEEEEcCCCCc-eecHHHccC-CeEEEEccCC
Confidence            45567899999999999999 999999999 9999888876

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=88.66  E-value=0.24  Score=48.71  Aligned_cols=69  Identities=22%  Similarity=0.192  Sum_probs=50.5

Q ss_pred             cCccccccccchhHHHHHhhhhcCCCCCccccc----ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        476 CSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYE----HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       476 C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~----~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      .-+-|++..--..+..++...    +..+.+..    +++++++.||||++|++.+. ++...|++| |+.|..+|...
T Consensus       161 V~viGrs~~mG~PmA~~L~~~----g~tVtv~~~rT~~l~e~~~~ADIVIsavg~~~-~v~~~~lk~-GavVIDvGin~  233 (296)
T PRK14188        161 AVVIGRSNLVGKPMAQLLLAA----NATVTIAHSRTRDLPAVCRRADILVAAVGRPE-MVKGDWIKP-GATVIDVGINR  233 (296)
T ss_pred             EEEEcCCcchHHHHHHHHHhC----CCEEEEECCCCCCHHHHHhcCCEEEEecCChh-hcchheecC-CCEEEEcCCcc
Confidence            445566666666666666532    23344443    56778899999999998865 789999999 99999999863

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.73  E-value=0.23  Score=48.17  Aligned_cols=40  Identities=33%  Similarity=0.366  Sum_probs=34.9

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+.... ++..+|++| |+.|.-+|...
T Consensus       193 ~l~~~~~~ADIvI~AvG~~~-~i~~~~vk~-GavVIDvGin~  232 (284)
T PRK14170        193 DLPQVAKEADILVVATGLAK-FVKKDYIKP-GAIVIDVGMDR  232 (284)
T ss_pred             CHHHHHhhCCEEEEecCCcC-ccCHHHcCC-CCEEEEccCcc
Confidence            45678899999999997766 599999999 99999999874

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.56  E-value=0.22  Score=48.40  Aligned_cols=40  Identities=25%  Similarity=0.280  Sum_probs=34.8

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +.++.++.|||||+|+... .++..+|++| |+.|.-+|...
T Consensus       193 ~l~~~~~~ADIvV~AvG~p-~~i~~~~ik~-GavVIDvGin~  232 (287)
T PRK14181        193 NLTEILKTADIIIAAIGVP-LFIKEEMIAE-KAVIVDVGTSR  232 (287)
T ss_pred             CHHHHHhhCCEEEEccCCc-CccCHHHcCC-CCEEEEecccc
Confidence            4667889999999999766 5799999999 99999999863

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.35  E-value=0.23  Score=48.72  Aligned_cols=40  Identities=25%  Similarity=0.265  Sum_probs=35.5

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +.+++++.|||||+|+..+ .+|..+|+++ |+.|..+|.+.
T Consensus       199 ~l~~~~~~ADIvI~Avg~~-~li~~~~vk~-GavVIDVgi~~  238 (295)
T PRK14174        199 DIPSYTRQADILIAAIGKA-RFITADMVKP-GAVVIDVGINR  238 (295)
T ss_pred             hHHHHHHhCCEEEEecCcc-CccCHHHcCC-CCEEEEeeccc
Confidence            4677899999999999777 8899999999 99999999874

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.61  E-value=0.28  Score=47.69  Aligned_cols=40  Identities=25%  Similarity=0.271  Sum_probs=35.0

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+.... ++.++|++| |+.|.-+|...
T Consensus       196 ~l~~~~k~ADIvV~AvGkp~-~i~~~~ik~-GavVIDvGin~  235 (284)
T PRK14193        196 DLAAHTRRADIIVAAAGVAH-LVTADMVKP-GAAVLDVGVSR  235 (284)
T ss_pred             CHHHHHHhCCEEEEecCCcC-ccCHHHcCC-CCEEEEccccc
Confidence            56678899999999998774 799999999 99999999873

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.24  E-value=0.27  Score=47.67  Aligned_cols=41  Identities=29%  Similarity=0.331  Sum_probs=35.8

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      .+..+.++.|||||.|++.+ .++..+|++| |+.|.-+|.+.
T Consensus       187 ~~L~~~~~~ADIvI~Avgk~-~lv~~~~vk~-GavVIDVgi~~  227 (279)
T PRK14178        187 ENLKAELRQADILVSAAGKA-GFITPDMVKP-GATVIDVGINQ  227 (279)
T ss_pred             hHHHHHHhhCCEEEECCCcc-cccCHHHcCC-CcEEEEeeccc
Confidence            35667889999999999766 7899999999 99999999874

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.93  E-value=0.32  Score=47.43  Aligned_cols=40  Identities=25%  Similarity=0.268  Sum_probs=34.6

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +.++.++.|||||+|+... -++.++|+++ |+.|.-+|...
T Consensus       191 ~l~~~~~~ADIvIsAvGkp-~~i~~~~vk~-GavVIDVGin~  230 (287)
T PRK14173        191 DLPAVTRRADVLVVAVGRP-HLITPEMVRP-GAVVVDVGINR  230 (287)
T ss_pred             CHHHHHhhCCEEEEecCCc-CccCHHHcCC-CCEEEEccCcc
Confidence            4667889999999999766 5679999999 99999999873

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.73  E-value=0.34  Score=47.35  Aligned_cols=41  Identities=22%  Similarity=0.268  Sum_probs=34.8

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      .+..+.++.|||||+|+..+. ++..+|++| |+.|.-+|...
T Consensus       196 ~nl~~~~~~ADIvIsAvGkp~-~i~~~~vk~-gavVIDvGin~  236 (293)
T PRK14185        196 KNLKKECLEADIIIAALGQPE-FVKADMVKE-GAVVIDVGTTR  236 (293)
T ss_pred             CCHHHHHhhCCEEEEccCCcC-ccCHHHcCC-CCEEEEecCcc
Confidence            346678899999999997666 589999999 99999999863

>PLN00203 glutamyl-tRNA reductase

Probab=85.72  E-value=0.34  Score=51.87  Aligned_cols=65  Identities=15%  Similarity=0.193  Sum_probs=43.7

Q ss_pred             cccccccccccccceeeeccCCccchhhhhccc---------Cccccccccccccccccchhhhh--cCce-EEEecchh
Q psy13389        506 AYEHGEDAARDADILVTATYSSVPVLKYEWLKK---------KDAHINAVGAGLNHHSELDAAIY--SHSS-IFFDSEAA  573 (617)
Q Consensus       506 ~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~---------~g~~v~~~g~~~~~~~e~~~~~~--~~~~-~~~d~~~~  573 (617)
                      ...+..+++.++|||++||++..|+|..+|+++         ++..+.-++.  |  +.+++++-  .... +-+|+..+
T Consensus       319 ~~~dl~~al~~aDVVIsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAv--P--RdIdp~v~~l~~v~lydiDdL~~  394 (519)
T PLN00203        319 PLDEMLACAAEADVVFTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISV--P--RNVGACVSELESARVYNVDDLKE  394 (519)
T ss_pred             cHhhHHHHHhcCCEEEEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCC--C--CCCccccccCCCCeEEEeccHHH
Confidence            335667788999999999999999999999854         1234544444  3  56777663  3333 44666544


Q ss_pred             h
Q psy13389        574 A  574 (617)
Q Consensus       574 ~  574 (617)
                      .
T Consensus       395 i  395 (519)
T PLN00203        395 V  395 (519)
T ss_pred             H
Confidence            3

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.69  E-value=0.5  Score=45.93  Aligned_cols=40  Identities=25%  Similarity=0.355  Sum_probs=34.0

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +.++.++.|||||+|+.... ++..+|++| |+.|.-+|...
T Consensus       195 ~l~~~~~~ADIvIsAvGk~~-~i~~~~ik~-gavVIDvGin~  234 (284)
T PRK14177        195 NLPSIVRQADIIVGAVGKPE-FIKADWISE-GAVLLDAGYNP  234 (284)
T ss_pred             CHHHHHhhCCEEEEeCCCcC-ccCHHHcCC-CCEEEEecCcc
Confidence            45678899999999986655 488999999 99999999864

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=85.37  E-value=0.56  Score=29.07  Aligned_cols=9  Identities=44%  Similarity=1.232  Sum_probs=4.3

Q ss_pred             CCccCCCCC
Q psy13389        345 NPFKCDVCP  353 (617)
Q Consensus       345 ~~~~C~~C~  353 (617)
                      .++.|++||
T Consensus        16 ~~~~CP~Cg   24 (33)
T cd00350          16 APWVCPVCG   24 (33)
T ss_pred             CCCcCcCCC
Confidence            344555554

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.26  E-value=0.34  Score=47.58  Aligned_cols=40  Identities=30%  Similarity=0.464  Sum_probs=35.2

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      ++.++++.||||++|++.. +++..+|++| |+.|.-+|...
T Consensus       195 ~l~e~~~~ADIVIsavg~~-~~v~~~~ik~-GaiVIDvgin~  234 (301)
T PRK14194        195 DAKALCRQADIVVAAVGRP-RLIDADWLKP-GAVVIDVGINR  234 (301)
T ss_pred             CHHHHHhcCCEEEEecCCh-hcccHhhccC-CcEEEEecccc
Confidence            5777889999999999776 7899999999 99999999763

>KOG4230|consensus

Probab=85.18  E-value=0.65  Score=48.44  Aligned_cols=71  Identities=21%  Similarity=0.290  Sum_probs=45.7

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCc-eEEEec-chhhhcchhhhhhcc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHS-SIFFDS-EAAARGELKGLYEQV  585 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~-~~~~d~-~~~~~~e~~~~~~~~  585 (617)
                      .+..+.+..|||||.|+.-+ -+++++|++| |+.|+-+|-.-     +++.--+.. ++|=|- .+.+ .|...+|.++
T Consensus       197 ~~lae~v~~ADIvIvAiG~P-efVKgdWiKp-GavVIDvGINy-----vpD~~Kksg~klvGDVdfe~A-kevas~ITPV  268 (935)
T KOG4230|consen  197 RNLAEKVSRADIVIVAIGQP-EFVKGDWIKP-GAVVIDVGINY-----VPDPSKKSGFKLVGDVDFESA-KEVASFITPV  268 (935)
T ss_pred             ccHHHHhccCCEEEEEcCCc-ceeecccccC-CcEEEEccccc-----cCCCCCcccceEeeecchHhh-hhhhhccccC
Confidence            35677888999999888443 3689999999 99999999862     344333333 455442 2222 3334455443


Q ss_pred             c
Q psy13389        586 P  586 (617)
Q Consensus       586 ~  586 (617)
                      |
T Consensus       269 P  269 (935)
T KOG4230|consen  269 P  269 (935)
T ss_pred             C
Confidence            3

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=84.99  E-value=0.37  Score=47.23  Aligned_cols=40  Identities=30%  Similarity=0.422  Sum_probs=33.6

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+.-. -++.++|++| |+.|.-+|...
T Consensus       201 ~l~~~~~~ADIvVsAvGkp-~~i~~~~ik~-gavVIDvGin~  240 (297)
T PRK14168        201 NLARHCQRADILIVAAGVP-NLVKPEWIKP-GATVIDVGVNR  240 (297)
T ss_pred             CHHHHHhhCCEEEEecCCc-CccCHHHcCC-CCEEEecCCCc
Confidence            4667889999999999544 4699999999 99999999763

>KOG2893|consensus

Probab=84.99  E-value=0.33  Score=44.26  Aligned_cols=41  Identities=24%  Similarity=0.554  Sum_probs=17.3

Q ss_pred             cCcCccccCChHHHHHHHHhccCCCCcccCCCcccccCchhhhhh
Q psy13389        181 CSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRH  225 (617)
Q Consensus       181 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  225 (617)
                      |.+|++.|....-|.+|++..    .|+|.+|.+...+-..|..|
T Consensus        13 cwycnrefddekiliqhqkak----hfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAK----HFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhhc----cceeeeehhhhccCCCceee
Confidence            444444444444444444321    24444444444444444333

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=84.90  E-value=0.38  Score=46.69  Aligned_cols=40  Identities=30%  Similarity=0.357  Sum_probs=34.4

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+.. ..++..+|+++ |+.|.-+|...
T Consensus       193 nl~~~~~~ADIvI~AvGk-~~~i~~~~ik~-gaiVIDvGin~  232 (282)
T PRK14182        193 DLAGEVGRADILVAAIGK-AELVKGAWVKE-GAVVIDVGMNR  232 (282)
T ss_pred             CHHHHHhhCCEEEEecCC-cCccCHHHcCC-CCEEEEeecee
Confidence            456678899999999975 55799999999 99999999874

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=84.88  E-value=0.67  Score=40.00  Aligned_cols=54  Identities=28%  Similarity=0.412  Sum_probs=36.7

Q ss_pred             ccccccccccccccceeeeccCCccchhhhhcccCc---cccccccccccccccchhhhhc
Q psy13389        505 QAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKD---AHINAVGAGLNHHSELDAAIYS  562 (617)
Q Consensus       505 ~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g---~~v~~~g~~~~~~~e~~~~~~~  562 (617)
                      ....+..+++..+|||++||++..+.+..+++.+..   ..|.-++.  |  +.+++.+-.
T Consensus        64 ~~~~~~~~~~~~~DivI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~--P--r~i~~~v~~  120 (135)
T PF01488_consen   64 IPLEDLEEALQEADIVINATPSGMPIITEEMLKKASKKLRLVIDLAV--P--RDIDPEVAE  120 (135)
T ss_dssp             EEGGGHCHHHHTESEEEE-SSTTSTSSTHHHHTTTCHHCSEEEES-S--S---SB-TTCGG
T ss_pred             eeHHHHHHHHhhCCeEEEecCCCCcccCHHHHHHHHhhhhceecccc--C--CCCChhhcc
Confidence            344667778899999999999999999999998822   35666653  3  346766533

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=84.69  E-value=0.4  Score=46.96  Aligned_cols=40  Identities=30%  Similarity=0.302  Sum_probs=34.6

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +.++.++.|||||+|+... .++..+|+++ |+.|.-+|...
T Consensus       194 ~l~~~~~~ADIvIsAvGkp-~~i~~~~ik~-gavVIDvGin~  233 (297)
T PRK14186        194 DLASITREADILVAAAGRP-NLIGAEMVKP-GAVVVDVGIHR  233 (297)
T ss_pred             CHHHHHhhCCEEEEccCCc-CccCHHHcCC-CCEEEEecccc
Confidence            4567889999999999855 5799999999 99999999874

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=84.15  E-value=0.43  Score=47.52  Aligned_cols=40  Identities=30%  Similarity=0.429  Sum_probs=34.4

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+.... ++.++|++| |+.|.-||...
T Consensus       250 nl~~~~~~ADIvIsAvGkp~-~v~~d~vk~-GavVIDVGin~  289 (345)
T PLN02897        250 DPEQITRKADIVIAAAGIPN-LVRGSWLKP-GAVVIDVGTTP  289 (345)
T ss_pred             CHHHHHhhCCEEEEccCCcC-ccCHHHcCC-CCEEEEccccc
Confidence            46678899999999997665 589999999 99999999873

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=84.15  E-value=0.43  Score=47.77  Aligned_cols=41  Identities=27%  Similarity=0.483  Sum_probs=34.4

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      .+..+.++.|||||+|+.... ++..+|++| |+.|+-||-..
T Consensus       266 ~nl~~~~r~ADIVIsAvGkp~-~i~~d~vK~-GAvVIDVGIn~  306 (364)
T PLN02616        266 KNPEEITREADIIISAVGQPN-MVRGSWIKP-GAVVIDVGINP  306 (364)
T ss_pred             CCHHHHHhhCCEEEEcCCCcC-cCCHHHcCC-CCEEEeccccc
Confidence            356678899999999996554 599999999 99999999863

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=84.07  E-value=0.56  Score=41.34  Aligned_cols=52  Identities=33%  Similarity=0.351  Sum_probs=34.7

Q ss_pred             cccccccccccceeeeccCCccchh---hhhcccCccccccccccccccccchhhhhcCc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLK---YEWLKKKDAHINAVGAGLNHHSELDAAIYSHS  564 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~---~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~  564 (617)
                      ...++++..+|||+|||... .++.   ...+++ |+.|..+|+..   .||+-+.+...
T Consensus        70 ~~~~~a~~~adi~vtaTG~~-~vi~~e~~~~mkd-gail~n~Gh~d---~Eid~~~L~~~  124 (162)
T PF00670_consen   70 MTLEEALRDADIFVTATGNK-DVITGEHFRQMKD-GAILANAGHFD---VEIDVDALEAN  124 (162)
T ss_dssp             E-HHHHTTT-SEEEE-SSSS-SSB-HHHHHHS-T-TEEEEESSSST---TSBTHHHHHTC
T ss_pred             cCHHHHHhhCCEEEECCCCc-cccCHHHHHHhcC-CeEEeccCcCc---eeEeecccccc
Confidence            35788999999999999764 3333   334678 99999999874   47887666554

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=83.86  E-value=0.45  Score=46.36  Aligned_cols=39  Identities=26%  Similarity=0.291  Sum_probs=34.0

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCcccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG  549 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~  549 (617)
                      +..+.++.|||||+|+... -++.++|++| |+.|.-+|-.
T Consensus       195 ~L~~~~~~ADIvV~AvGkp-~~i~~~~vk~-GavVIDvGin  233 (288)
T PRK14171        195 NLSSITSKADIVVAAIGSP-LKLTAEYFNP-ESIVIDVGIN  233 (288)
T ss_pred             CHHHHHhhCCEEEEccCCC-CccCHHHcCC-CCEEEEeecc
Confidence            4566789999999999855 5899999999 9999999976

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=83.45  E-value=0.48  Score=46.23  Aligned_cols=39  Identities=26%  Similarity=0.282  Sum_probs=33.7

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCcccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG  549 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~  549 (617)
                      +..+.++.||||++|++... ++..+|+++ |+.|.-+|..
T Consensus       194 ~l~~~~~~ADIVIsAvg~p~-~i~~~~vk~-gavVIDvGi~  232 (286)
T PRK14175        194 DMASYLKDADVIVSAVGKPG-LVTKDVVKE-GAVIIDVGNT  232 (286)
T ss_pred             hHHHHHhhCCEEEECCCCCc-ccCHHHcCC-CcEEEEcCCC
Confidence            35678899999999998866 478899999 9999999985

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=82.97  E-value=1.8  Score=35.70  Aligned_cols=24  Identities=17%  Similarity=0.602  Sum_probs=17.9

Q ss_pred             CceecCCCCCcCCCHHHHHHHHHhc
Q psy13389        261 KRYLCTMCPKCFTRKDDLNRHMRNH  285 (617)
Q Consensus       261 ~~~~C~~C~~~f~~~~~L~~H~~~h  285 (617)
                      +...|..|+..... +.+..|++..
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~   33 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKR   33 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHh
Confidence            45678888887765 7788888843

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=82.88  E-value=2.6  Score=34.73  Aligned_cols=25  Identities=12%  Similarity=0.550  Sum_probs=18.8

Q ss_pred             CcccCCCCccccCChhHHHHHHhhcc
Q psy13389        233 KPFLCSMCAKCFSRKDDLNRHMKIHE  258 (617)
Q Consensus       233 ~~~~C~~C~~~f~~~~~L~~H~~~h~  258 (617)
                      +...|..|+..... ..+..|++..+
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H   34 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRH   34 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhc
Confidence            34679999988765 88899998443

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=82.85  E-value=0.51  Score=45.78  Aligned_cols=40  Identities=28%  Similarity=0.361  Sum_probs=34.2

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+.... ++..+|++| |+.|.-+|...
T Consensus       194 ~l~~~~~~ADIvIsAvGkp~-~i~~~~ik~-gavVIDvGin~  233 (278)
T PRK14172        194 NLKEVCKKADILVVAIGRPK-FIDEEYVKE-GAIVIDVGTSS  233 (278)
T ss_pred             CHHHHHhhCCEEEEcCCCcC-ccCHHHcCC-CcEEEEeeccc
Confidence            45667899999999997666 599999999 99999999763

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=82.67  E-value=0.51  Score=45.85  Aligned_cols=40  Identities=25%  Similarity=0.243  Sum_probs=34.3

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+.... ++..+|+++ |+.|.-+|...
T Consensus       192 ~l~~~~~~ADIvI~AvG~p~-~i~~~~vk~-GavVIDvGin~  231 (282)
T PRK14169        192 NLKQLTKEADILVVAVGVPH-FIGADAVKP-GAVVIDVGISR  231 (282)
T ss_pred             CHHHHHhhCCEEEEccCCcC-ccCHHHcCC-CcEEEEeeccc
Confidence            46678899999999997665 589999999 99999999863

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=82.67  E-value=0.53  Score=46.12  Aligned_cols=73  Identities=18%  Similarity=0.144  Sum_probs=46.2

Q ss_pred             cCccccccccchhHHHHHhhhhcCCCCCcccc----cccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        476 CSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAY----EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       476 C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~----~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +-+-|++-.--.-|...+......+...+..+    .+..+.++.|||||+|+.-.. ++.++|+++ |+.|.-+|-..
T Consensus       160 vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsAvGkp~-~i~~~~ik~-gaiVIDvGin~  236 (297)
T PRK14167        160 VVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAAAGVPE-LIDGSMLSE-GATVIDVGINR  236 (297)
T ss_pred             EEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcC-ccCHHHcCC-CCEEEEccccc
Confidence            34445555554445444432210012223322    345667899999999886555 789999999 99999999763

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=82.58  E-value=0.52  Score=45.74  Aligned_cols=40  Identities=15%  Similarity=0.235  Sum_probs=33.6

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+.-.. ++..+|++| |+.|.-+|...
T Consensus       193 ~l~~~~~~ADIvV~AvGkp~-~i~~~~vk~-gavvIDvGin~  232 (281)
T PRK14183        193 DLKAHTKKADIVIVGVGKPN-LITEDMVKE-GAIVIDIGINR  232 (281)
T ss_pred             CHHHHHhhCCEEEEecCccc-ccCHHHcCC-CcEEEEeeccc
Confidence            45667899999999995444 689999999 99999999763

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=82.57  E-value=0.54  Score=45.98  Aligned_cols=40  Identities=38%  Similarity=0.480  Sum_probs=34.2

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+.... ++.++|+++ |+.|.-+|...
T Consensus       196 ~l~~~~~~ADIvVsAvGkp~-~i~~~~ik~-gaiVIDVGin~  235 (294)
T PRK14187        196 DLADYCSKADILVAAVGIPN-FVKYSWIKK-GAIVIDVGINS  235 (294)
T ss_pred             CHHHHHhhCCEEEEccCCcC-ccCHHHcCC-CCEEEEecccc
Confidence            45668899999999997665 589999999 99999999863

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=82.38  E-value=0.46  Score=46.24  Aligned_cols=40  Identities=20%  Similarity=0.185  Sum_probs=33.7

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+.... ++..+|++| |+.|.-+|...
T Consensus       193 ~l~~~~~~ADIvV~AvG~p~-~i~~~~vk~-GavVIDvGi~~  232 (285)
T PRK14191        193 DLSFYTQNADIVCVGVGKPD-LIKASMVKK-GAVVVDIGINR  232 (285)
T ss_pred             HHHHHHHhCCEEEEecCCCC-cCCHHHcCC-CcEEEEeeccc
Confidence            34567899999999996655 588999999 99999999863

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=81.57  E-value=0.8  Score=31.42  Aligned_cols=32  Identities=22%  Similarity=0.347  Sum_probs=27.6

Q ss_pred             CCCCCcccccCccccccccchhHHHHHhhhhc
Q psy13389        467 DAPKEKSFNCSKCLNIVRIPVEIKSLVEKLTS  498 (617)
Q Consensus       467 ~~~~~k~f~C~~C~~~f~~~~~l~~H~~~~~~  498 (617)
                      +..||--++||-||..|+......+|+...+.
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            34578889999999999999999999987664

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=81.54  E-value=0.64  Score=45.20  Aligned_cols=40  Identities=23%  Similarity=0.216  Sum_probs=34.1

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +..+.++.|||||+|+....- +..+|+++ |+.|.-+|...
T Consensus       194 dl~~~~k~ADIvIsAvGkp~~-i~~~~vk~-gavVIDvGin~  233 (282)
T PRK14180        194 DLKSHTTKADILIVAVGKPNF-ITADMVKE-GAVVIDVGINH  233 (282)
T ss_pred             CHHHHhhhcCEEEEccCCcCc-CCHHHcCC-CcEEEEecccc
Confidence            455678999999999976664 88999999 99999999863

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=81.44  E-value=0.87  Score=47.44  Aligned_cols=52  Identities=13%  Similarity=0.169  Sum_probs=39.5

Q ss_pred             ccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhc
Q psy13389        507 YEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYS  562 (617)
Q Consensus       507 ~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~  562 (617)
                      .+...+++..|||||+||+|+.|+|..+.++.++.++.-++-.    +.++|++-.
T Consensus       233 ~~~l~~~l~~aDiVI~aT~a~~~vi~~~~~~~~~~~~iDLavP----Rdidp~v~~  284 (414)
T PRK13940        233 LSELPQLIKKADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIP----QALDPKLGE  284 (414)
T ss_pred             HHHHHHHhccCCEEEECcCCCCeeECHHHhCCCCeEEEEeCCC----CCCCccccC
Confidence            3556778889999999999999999988776545666666543    568877743

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=80.69  E-value=0.68  Score=45.05  Aligned_cols=69  Identities=13%  Similarity=0.097  Sum_probs=45.5

Q ss_pred             cCccccccccchhHHHHHhhhhcCCCCCcccc----cccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        476 CSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAY----EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       476 C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~----~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      .-+-|++..--.-|...+...    ...+..+    .+..+.++.|||||+|+.... ++..+|++| |+.|.-+|-..
T Consensus       160 vvVvGrS~iVGkPla~lL~~~----~atVt~chs~T~nl~~~~~~ADIvIsAvGkp~-~i~~~~vk~-GavVIDvGin~  232 (282)
T PRK14166        160 AVIIGASNIVGRPMATMLLNA----GATVSVCHIKTKDLSLYTRQADLIIVAAGCVN-LLRSDMVKE-GVIVVDVGINR  232 (282)
T ss_pred             EEEECCCCcchHHHHHHHHHC----CCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcC-ccCHHHcCC-CCEEEEecccc
Confidence            334555555544454444321    1223222    345667899999999997665 488999999 99999999763

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=80.07  E-value=0.75  Score=44.80  Aligned_cols=39  Identities=31%  Similarity=0.412  Sum_probs=33.3

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCcccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG  549 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~  549 (617)
                      +.++.++.|||||.|+..+. ++..+|+++ |+.|.-+|..
T Consensus       195 ~l~~~~~~ADIvi~avG~p~-~v~~~~vk~-gavVIDvGin  233 (285)
T PRK10792        195 NLRHHVRNADLLVVAVGKPG-FIPGEWIKP-GAIVIDVGIN  233 (285)
T ss_pred             CHHHHHhhCCEEEEcCCCcc-cccHHHcCC-CcEEEEcccc
Confidence            46678899999999997666 477899999 9999999965

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	617
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-37
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-35
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		5e-31
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-13
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		9e-19
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-15
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-12
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-10
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-15
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		9e-13
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-08
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-15
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-12
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-15
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-10
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-15
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-11
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-15
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-11
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		7e-10
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-14
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-12
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		9e-10
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		9e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-14
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		8e-12
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		8e-10
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		6e-08
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-14
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-13
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-11
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-14
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-12
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-09
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		8e-08
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-14
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-12
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-09
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		9e-08
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-14
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-12
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-09
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		9e-08
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		5e-13
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-10
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		7e-08
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		6e-13
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		6e-11
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		3e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-12
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-11
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		3e-11
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		7e-11
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		9e-08
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		6e-12
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-11
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		1e-07
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-11
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-08
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-05
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-11
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-08
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-10
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		5e-09
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		4e-10
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		7e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-09
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		4e-08
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		4e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-09
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-07
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		7e-09
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		4e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		4e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-04
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-08
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-04
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		3e-08
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		8e-04
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		4e-07
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		9e-07
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		8e-07
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-06
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-05
2i99_A	312	Crystal Structure Of Human Mu_crystallin At 2.6 Ang		3e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		4e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		4e-05
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		5e-06
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		8e-06
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		2e-05
1vll_A	334	Crystal Structure Of Alanine Dehydrogenase (Af1665)		3e-05
1omo_A	322	Alanine Dehydrogenase Dimer WBOUND NAD (ARCHAEAL) L		3e-05
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		4e-05
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		9e-05
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-04
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		2e-04
2ep2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2ep2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-04
2eml_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  153 bits (386), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 92/169 (54%)
Query: 121 KVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQ 180
           K + C +C   F        H + H G K + C  C K+F+DK    RH R H G KP++
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK 79
Query: 181 CSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMC 240
           C  C +SF+QR+NL  H R H G +P+ C  C   F+  + L  H R H G KP+ C  C
Sbjct: 80  CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPEC 139
Query: 241 AKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLK 289
            K FSR+D+L+ H + H G K Y C  C K F+R+D LN H R H G K
Sbjct: 140 GKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  146 bits (369), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 96/169 (56%)
Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G KP+ C  C +SF++  +L  H R H G +P++C  C   F++K DL RH R H G KP
Sbjct: 18  GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKP 77
Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           + C  C K FS++ +L  H + H G K Y C  C K F++   L  H R H G KP+ C 
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP 137
Query: 295 VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHG 343
            C +SF+++  L+ H R HT  KP+ C  C +SFS++  L +H +   G
Sbjct: 138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  132 bits (333), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Query: 256 IHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTN 315
           +  G K Y C  C K F+R D L  H R H G KP+ C  C +SF+ K  L  H R HT 
Sbjct: 15  LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG 74
Query: 316 SKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKP 375
            KP+ C  C +SFSQ++NL  H +   G  P+ C  C  ++F +   L  H RT  G KP
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPEC-GKSFSQLAHLRAHQRTHTGEKP 133
Query: 376 FKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH 426
           +KC  C + F ++  L  H R      P+KC  C K F+++  L  H +TH
Sbjct: 134 YKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 332 SNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVL 391
           S+      L+ G  P+ C  C  ++F +   L+ H RT  G KP+KC  C + F  K  L
Sbjct: 7   SSSVAQAALEPGEKPYACPEC-GKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65
Query: 392 KEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
             H R      P+KC  C K F++++NLR H +TH   +P  C +C + F +   L+ H
Sbjct: 66  TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAH 124

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 52/85 (61%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFL 236
           KP++C  C +SF+Q SNL  H R H G +P++C  C   F+  SDL +H R H G KP+ 
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 237 CSMCAKCFSRKDDLNRHMKIHEGSK 261
           C  C K FSR D L+RH + H+  K
Sbjct: 63  CPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 48/85 (56%)
Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFH 292
           KP+ C  C K FS+  +L +H + H G K Y C  C K F++  DL +H R H G KP+ 
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 293 CSVCFESFTQKALLNIHLRIHTNSK 317
           C  C +SF++   L+ H R H N K
Sbjct: 63  CPECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFK 348
           KP+ C  C +SF+Q + L  H R HT  KP+ C  C +SFSQ S+L  H +   G  P+K
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 349 CDVCPNETFEKETQLSLHMRT 369
           C  C  ++F +   LS H RT
Sbjct: 63  CPEC-GKSFSRSDHLSRHQRT 82

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 346 PFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFK 405
           P+KC  C  ++F + + L  H RT  G KP+KC  C + F + S L++H R      P+K
Sbjct: 4   PYKCPEC-GKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 406 CDICFKLFTKKSNLRTHIKTHE 427
           C  C K F++  +L  H +TH+
Sbjct: 63  CPECGKSFSRSDHLSRHQRTHQ 84

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGI 232
           +PF C+   C++ + + S+L +H R H G +P+QC+   C   F+    L RH R H G+
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNH 285
           KPF C  C + FSR D L  H + H G K + C    C K F R D+L RH   H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGL 288
           +PF+C+   C K + +   L  H + H G K Y C    C + F+R D L RH R H G+
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIH 337
           KPF C  C   F++   L  H R HT  KP +C    C + F++   L  H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 314 TNSKPHACSI--CTESFSQKSNLYIHLKLQHGVNPFKCDVCPNET-FEKETQLSLHMRTV 370
           +  +P  C+   C + + + S+L +H +   G  P++CD    E  F +  QL  H R  
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 371 HGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI--CFKLFTKKSNLRTHIKTH 426
            GVKPF+C  C   F +   LK H R      PF C    C K F +   L  H   H
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           +P+ C V  C   F+Q++NL+ H+RIH G +PFQC +C   F+ ++ LN H R H G KP
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKP 62
Query: 235 FLCSMCAKCFSRKDDLNRHMKIH 257
           F C +C + F+      RH KIH
Sbjct: 63  FACDICGRKFATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 263 YLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
           Y C +  C + F++K +L+ H+R H G KPF C +C  +F+Q+A LN H+R HT  KP A
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFA 64
Query: 321 CSICTESFSQKSNLYIHLKL 340
           C IC   F+       H K+
Sbjct: 65  CDICGRKFATLHTRTRHTKI 84

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 351 VCPNET----FEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
            CP E+    F ++T L  H+R   G KPF+C +C   F +++ L  H+R      PF C
Sbjct: 6   ACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFAC 65
Query: 407 DICFKLFTKKSNLRTHIKTH 426
           DIC + F        H K H
Sbjct: 66  DICGRKFATLHTRTRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           +P+ C V  C   F+Q++NL+ H+RIH G +PFQC +C   F+  + LN+H R H G KP
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKP 62
Query: 235 FLCSMCAKCFSRKDDLNRHMKIH 257
           F C +C + F+     +RH KIH
Sbjct: 63  FACDICGRKFATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 263 YLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
           Y C +  C + F++K +L+ H+R H G KPF C +C  +F+Q   LN H+R HT  KP A
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFA 64
Query: 321 CSICTESFSQKSNLYIHLKL 340
           C IC   F+       H K+
Sbjct: 65  CDICGRKFATLHTRDRHTKI 84

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 351 VCPNET----FEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
            CP E+    F ++T L  H+R   G KPF+C +C   F + + L +H+R      PF C
Sbjct: 6   ACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFAC 65
Query: 407 DICFKLFTKKSNLRTHIKTH 426
           DIC + F        H K H
Sbjct: 66  DICGRKFATLHTRDRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           +P+ C V  C   F+  SNL  H+RIH G +PFQC +C   F+    L  H R H G KP
Sbjct: 3   RPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 235 FLCSMCAKCFSRKDDLNRHMKIH 257
           F C +C + F+R D+  RH KIH
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
           +P+ C +  C + FS   +L RH++IH G K + C +C + F+R D L  H+R H G KP
Sbjct: 3   RPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 291 FHCSVCFESFTQKALLNIHLRIHTNSK 317
           F C +C   F +      H +IH   K
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP 346
           +P+ C V  C   F+  + L  H+RIHT  KP  C IC  +FS+  +L  H++   G  P
Sbjct: 3   RPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 347 FKCDVCPNE---TFEKETQLSLHMR 368
           F CD+C  +   + E++    +H+R
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLR 87

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 351 VCPNET----FEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
            CP E+    F   + L+ H+R   G KPF+C +C   F +   L  H+R      PF C
Sbjct: 6   ACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 407 DICFKLFTKKSNLRTHIKTH 426
           DIC + F +    + H K H
Sbjct: 66  DICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           +P+ C V  C   F+Q  +L  H+RIH G +PFQC +C   F+    L  H R H G KP
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 235 FLCSMCAKCFSRKDDLNRHMKIH 257
           F C +C + F+R D+  RH KIH
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
           +P+ C +  C + FS+   L RH++IH G K + C +C + F+R D L  H+R H G KP
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 291 FHCSVCFESFTQKALLNIHLRIHTNSK 317
           F C +C   F +      H +IH   K
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP 346
           +P+ C V  C   F+Q   L  H+RIHT  KP  C IC  +FS+  +L  H++   G  P
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 347 FKCDVCPNE---TFEKETQLSLHMR 368
           F CD+C  +   + E++    +H+R
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLR 87

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 351 VCPNET----FEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
            CP E+    F +   L+ H+R   G KPF+C +C   F +   L  H+R      PF C
Sbjct: 6   ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 407 DICFKLFTKKSNLRTHIKTH 426
           DIC + F +    + H K H
Sbjct: 66  DICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           +P+ C V  C   F++ ++L  H+RIH G +PFQC +C   F+    L  H R H G KP
Sbjct: 3   RPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 235 FLCSMCAKCFSRKDDLNRHMKIH 257
           F C +C + F+R D+  RH KIH
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
           +P+ C +  C + FSR  DL RH++IH G K + C +C + F+R D L  H+R H G KP
Sbjct: 3   RPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 291 FHCSVCFESFTQKALLNIHLRIHTNSK 317
           F C +C   F +      H +IH   K
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP 346
           +P+ C V  C   F++ A L  H+RIHT  KP  C IC  +FS+  +L  H++   G  P
Sbjct: 3   RPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 347 FKCDVCPNE---TFEKETQLSLHMR 368
           F CD+C  +   + E++    +H+R
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLR 87

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 351 VCPNET----FEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
            CP E+    F +   L+ H+R   G KPF+C +C   F +   L  H+R      PF C
Sbjct: 6   ACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 407 DICFKLFTKKSNLRTHIKTH 426
           DIC + F +    + H K H
Sbjct: 66  DICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           +P+ C V  C   F++ + L  H+RIH G +PFQC +C   F+    L  H R H G KP
Sbjct: 3   RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 235 FLCSMCAKCFSRKDDLNRHMKIH 257
           F C +C + F+R D+  RH KIH
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
           +P+ C +  C + FSR  +L RH++IH G K + C +C + F+R D L  H+R H G KP
Sbjct: 3   RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 291 FHCSVCFESFTQKALLNIHLRIHTNSK 317
           F C +C   F +      H +IH   K
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP 346
           +P+ C V  C   F++ A L  H+RIHT  KP  C IC  +FS+  +L  H++   G  P
Sbjct: 3   RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 347 FKCDVCPNE---TFEKETQLSLHMR 368
           F CD+C  +   + E++    +H+R
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLR 87

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 351 VCPNET----FEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
            CP E+    F +  +L+ H+R   G KPF+C +C   F +   L  H+R      PF C
Sbjct: 6   ACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 407 DICFKLFTKKSNLRTHIKTH 426
           DIC + F +    + H K H
Sbjct: 66  DICGRKFARSDERKRHTKIH 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 44/79 (55%)
Query: 153 CSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVC 212
           C VC K F+ K K   HMR H G+KP++C  C  +    S+LN HLRIH   RPF+C +C
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70
Query: 213 YICFTNKSDLNRHSRIHNG 231
                N S L  H R H G
Sbjct: 71  PYASRNSSQLTVHLRSHTG 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 265 CTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC 324
           C +C KCF+RKD L  HMR H G+KP+ C  C  +    + LN HLRIH++ +P  C IC
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70
Query: 325 TESFSQKSNLYIHLKLQHG 343
             +    S L +HL+   G
Sbjct: 71  PYASRNSSQLTVHLRSHTG 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 345 NPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPF 404
            P KC+VC  + F ++ +L  HMR   GVKP+KC  CD      S L +HLR+  +  PF
Sbjct: 7   GPHKCEVC-GKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF 65
Query: 405 KCDICFKLFTKKSNLRTHIKTH 426
           KC IC       S L  H+++H
Sbjct: 66  KCQICPYASRNSSQLTVHLRSH 87

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           +P+ C V  C   F++   L  H+RIH G +PFQC +C   F+    L  H R H G KP
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 235 FLCSMCAKCFSRKDDLNRHMKIH 257
           F C +C + F+R D+  RH KIH
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
           +P+ C +  C + FSR D+L RH++IH G K + C +C + F+R D L  H+R H G KP
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 291 FHCSVCFESFTQKALLNIHLRIHTNSK 317
           F C +C   F +      H +IH   K
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP 346
           +P+ C V  C   F++   L  H+RIHT  KP  C IC  +FS+  +L  H++   G  P
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 347 FKCDVCPNE---TFEKETQLSLHMR 368
           F CD+C  +   + E++    +H+R
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLR 87

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 351 VCPNET----FEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
            CP E+    F +  +L+ H+R   G KPF+C +C   F +   L  H+R      PF C
Sbjct: 6   ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 407 DICFKLFTKKSNLRTHIKTH 426
           DIC + F +    + H K H
Sbjct: 66  DICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           +P+ C V  C   F++   L  H+RIH G +PFQC +C   F+    L  H R H G KP
Sbjct: 2   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 61
Query: 235 FLCSMCAKCFSRKDDLNRHMKIH 257
           F C +C + F+R D+  RH KIH
Sbjct: 62  FACDICGRKFARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
           +P+ C +  C + FSR D+L RH++IH G K + C +C + F+R D L  H+R H G KP
Sbjct: 2   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 61
Query: 291 FHCSVCFESFTQKALLNIHLRIH 313
           F C +C   F +      H +IH
Sbjct: 62  FACDICGRKFARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP 346
           +P+ C V  C   F++   L  H+RIHT  KP  C IC  +FS+  +L  H++   G  P
Sbjct: 2   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 61
Query: 347 FKCDVCPNE---TFEKETQLSLHMR 368
           F CD+C  +   + E++    +H+R
Sbjct: 62  FACDICGRKFARSDERKRHTKIHLR 86

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 351 VCPNET----FEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
            CP E+    F +  +L+ H+R   G KPF+C +C   F +   L  H+R      PF C
Sbjct: 5   ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 64
Query: 407 DICFKLFTKKSNLRTHIKTH 426
           DIC + F +    + H K H
Sbjct: 65  DICGRKFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           +P+ C V  C   F++   L  H+RIH G +PFQC +C   F+    L  H R H G KP
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 235 FLCSMCAKCFSRKDDLNRHMKIH 257
           F C +C + F+R D+  RH KIH
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
           +P+ C +  C + FSR D+L RH++IH G K + C +C + F+R D L  H+R H G KP
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 291 FHCSVCFESFTQKALLNIHLRIH 313
           F C +C   F +      H +IH
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP 346
           +P+ C V  C   F++   L  H+RIHT  KP  C IC  +FS+  +L  H++   G  P
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 347 FKCDVCPNE---TFEKETQLSLHMR 368
           F CD+C  +   + E++    +H+R
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLR 87

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 351 VCPNET----FEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
            CP E+    F +  +L+ H+R   G KPF+C +C   F +   L  H+R      PF C
Sbjct: 6   ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 407 DICFKLFTKKSNLRTHIKTH 426
           DIC + F +    + H K H
Sbjct: 66  DICGRKFARSDERKRHTKIH 85

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 46/81 (56%)
Query: 179 FQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
           F C +C +SF + S L+ HL IH   RP+ C  C   F  KSD+ +H+ IH G KP  C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 239 MCAKCFSRKDDLNRHMKIHEG 259
           +C K FS+  +L  H + H G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 263 YLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
           + C +C K F R   L+ H+  H   +P+ C  C + F QK+ +  H  IHT  KPH C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 323 ICTESFSQKSNLYIHLKLQHG 343
           +C ++FSQ SNL  H +   G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 347 FKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
           F C +C  ++F++ + LS H+      +P+ C  C + F +KS +K+H  +     P KC
Sbjct: 2   FDCKIC-GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 407 DICFKLFTKKSNLRTHIKTH 426
            +C K F++ SNL TH + H
Sbjct: 61  QVCGKAFSQSSNLITHSRKH 80

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 146 DGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIR 205
            G K++ C  C K+FT K + +RHM  H G++P+ C VC + F  + +L  H++IH GI+
Sbjct: 6   SGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 206 PFQCNVCYICFTNKSDLNRH 225
           P++CN+C   F  +   +RH
Sbjct: 65  PYECNICAKRFMWRDSFHRH 84

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 258 EGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSK 317
            G K Y C  C K FT K   +RHM  H GL+P+ C VC + F  K  L  H++IHT  K
Sbjct: 6   SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 318 PHACSICTESFSQKSNLYIHL 338
           P+ C+IC + F  + + + H+
Sbjct: 65  PYECNICAKRFMWRDSFHRHV 85

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 39/66 (59%)
Query: 296 CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNE 355
           C +SFT K+  + H+ +H   +P+ C +C + F  K +L  H+K+  G+ P++C++C   
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 356 TFEKET 361
              +++
Sbjct: 75  FMWRDS 80

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 354 NETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLF 413
            ++F  ++Q   HM    G++P+ C +C + F  K  L  H+++   + P++C+IC K F
Sbjct: 16  GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRF 75
Query: 414 TKKSNLRTHIKT 425
             + +   H+ +
Sbjct: 76  MWRDSFHRHVTS 87

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 97  CSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMK---IHDGVKVFLC 153
           C  C K F+ K++L  H + H+  K F C +C   ++ K     H     ++   +VF C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69
Query: 154 SVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHL-RIHDG 203
           SVC +TF  +++   HM +H G  P++CS CS+ F Q+ +L  H+ ++H G
Sbjct: 70  SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSR---IHNG 231
           G    +C  C + F  +  L +H R H G +PF+C  C  C+  K +L  H     ++  
Sbjct: 4   GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63
Query: 232 IKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHM 282
            + F CS+C + F R+ +L  HM  H G   Y C+ C + F +K DL  HM
Sbjct: 64  EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 230 NGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRH-MRN--HD 286
           +G     C  C K F  K  L  H + H G K + C  C KC+ RK++L  H  RN  + 
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 287 GLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHL-KLQHG 343
             + F CSVC E+F ++  L +H+  HT   P+ CS C++ F QK +L  H+ KL  G
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 286 DGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLK---LQH 342
            G     C  C + F  K  L +H R HT  KP  C  C + + +K NL  H     +  
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 343 GVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHL 395
               F C VC  ETF +  +L LHM +  G  P+KCS C + F +K  L+ H+
Sbjct: 63  SEQVFTCSVC-QETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 343 GVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLR---VSH 399
           G +  +C  C ++ F  +  L +H R   G KPF+C  C + + +K  L EH     ++ 
Sbjct: 4   GSSGVECPTC-HKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 400 NVNPFKCDICFKLFTKKSNLRTHIKTHE---PIPCDKCPEIFEKKTDLQEHVDKCHN 453
           +   F C +C + F ++  LR H+ +H    P  C  C + F +K DLQ H+ K H+
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 184 CSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSMCA 241
           C++ +T+ S+L  HLR H G +P++C    C   F    +L RH R H G KPF C +C 
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 242 KCFSRKDDLNRHMKIHE 258
           + FSR D L  HMK H+
Sbjct: 83  RSFSRSDHLALHMKRHQ 99

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 240 CAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCF 297
           C K +++   L  H++ H G K Y CT   C   F R D+L RH R H G KPF C VC 
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 298 ESFTQKALLNIHLRIHTN 315
            SF++   L +H++ H N
Sbjct: 83  RSFSRSDHLALHMKRHQN 100

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 354 NETFEKETQLSLHMRTVHGVKPFKCSM--CDEGFPKKSVLKEHLRVSHNVNPFKCDICFK 411
            + + K + L  H+RT  G KP+KC+   CD  F +   L  H R      PF+C +C +
Sbjct: 24  TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNR 83
Query: 412 LFTKKSNLRTHIKTHE 427
            F++  +L  H+K H+
Sbjct: 84  SFSRSDHLALHMKRHQ 99

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 182 SVCSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSM 239
           + C +++T+ S+L  HLR H G +P+ C+   C   F    +L RH R H G +PF C  
Sbjct: 12  AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK 71
Query: 240 CAKCFSRKDDLNRHMKIH 257
           C + FSR D L  HMK H
Sbjct: 72  CDRAFSRSDHLALHMKRH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 238 SMCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSV 295
           + C K +++   L  H++ H G K Y C    C   F R D+L RH R H G +PF C  
Sbjct: 12  AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK 71
Query: 296 CFESFTQKALLNIHLRIH 313
           C  +F++   L +H++ H
Sbjct: 72  CDRAFSRSDHLALHMKRH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 349 CDVCP-NETFEKETQLSLHMRTVHGVKPFKCSM--CDEGFPKKSVLKEHLRVSHNVNPFK 405
           CD     +T+ K + L  H+RT  G KP+ C    C   F +   L  H R      PF+
Sbjct: 9   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 68
Query: 406 CDICFKLFTKKSNLRTHIKTH 426
           C  C + F++  +L  H+K H
Sbjct: 69  CQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 182 SVCSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSM 239
           + C +++T+ S+L  HLR H G +P+ C+   C   F    +L RH R H G +PF C  
Sbjct: 11  AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK 70
Query: 240 CAKCFSRKDDLNRHMKIH 257
           C + FSR D L  HMK H
Sbjct: 71  CDRAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 238 SMCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSV 295
           + C K +++   L  H++ H G K Y C    C   F R D+L RH R H G +PF C  
Sbjct: 11  AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK 70
Query: 296 CFESFTQKALLNIHLRIH 313
           C  +F++   L +H++ H
Sbjct: 71  CDRAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 349 CDVCP-NETFEKETQLSLHMRTVHGVKPFKCSM--CDEGFPKKSVLKEHLRVSHNVNPFK 405
           CD     +T+ K + L  H+RT  G KP+ C    C   F +   L  H R      PF+
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 406 CDICFKLFTKKSNLRTHIKTH 426
           C  C + F++  +L  H+K H
Sbjct: 68  CQKCDRAFSRSDHLALHMKRH 88

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 203 GIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGS-- 260
           G     C +C   F +   LNRH   H+G KP+ C +C   F RKD ++ H++ H+GS  
Sbjct: 4   GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG 63
Query: 261 KRYLCTMCPKCFTRKDDLNRHMRN 284
           K Y+C  C K F+R D LN H++ 
Sbjct: 64  KPYICQSCGKGFSRPDHLNGHIKQ 87

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 258 EGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNS- 316
            GS    C +C K F     LNRH  +H G KP+ C VC   F +K  ++ H+R H  S 
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62
Query: 317 -KPHACSICTESFSQKSNLYIHLKLQH 342
            KP+ C  C + FS+  +L  H+K  H
Sbjct: 63  GKPYICQSCGKGFSRPDHLNGHIKQVH 89

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 314 TNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGV 373
           + S   AC IC + F    +L  H     G  P+ C VC    F+++ ++S H+R+  G 
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVC-GLRFKRKDRMSYHVRSHDGS 61
Query: 374 --KPFKCSMCDEGFPKKSVLKEHLRVSHN 400
             KP+ C  C +GF +   L  H++  H+
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 240 CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CF 297
           C K F     + +H+  H G + ++C  C K F     L RH   H G KPF C+   C 
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 298 ESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHL 338
           + F+    L  H+RIHT  +P+ C    C + F+Q +NL  H+
Sbjct: 72  KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 351 VCPNE----TFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
            CP++     F   + +  H+ T HG +   C+ C + F + S LK H  V     PF+C
Sbjct: 7   ACPHKGCTKMFRDNSAMRKHLHT-HGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 407 DI--CFKLFTKKSNLRTHIKTHEP-----IPCDKCPEIFEKKTDLQEHV 448
               C K F+   NLRTH++ H        P D C + F + T+L+ H+
Sbjct: 66  TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 40/81 (49%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFL 236
           K F C  C   FT+  NL IH R H   RP+ C++C+  F  +  L  H  IH+  KPF 
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK 75
Query: 237 CSMCAKCFSRKDDLNRHMKIH 257
           C  C K F +   L  H  +H
Sbjct: 76  CQECGKGFCQSRTLAVHKTLH 96

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFH 292
           K F+C  C + F++  +L  H + H   + Y C +C K F R+D L  H   H   KPF 
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK 75
Query: 293 CSVCFESFTQKALLNIHLRIH-TNSKPHACS 322
           C  C + F Q   L +H  +H   S P A S
Sbjct: 76  CQECGKGFCQSRTLAVHKTLHMQTSSPTAAS 106

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFK 348
           K F C  C   FT+   L IH R HT+ +P+ C IC ++F ++ +L  H  +     PFK
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK 75
Query: 349 CDVCPNETFEKET---QLSLHMRT 369
           C  C     +  T     +LHM+T
Sbjct: 76  CQECGKGFCQSRTLAVHKTLHMQT 99

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 347 FKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
           F C  C    F K   L +H RT    +P+ C +C + F ++  L++H  +     PFKC
Sbjct: 18  FICKFC-GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC 76
Query: 407 DICFKLFTKKSNLRTHIKTH 426
             C K F +   L  H   H
Sbjct: 77  QECGKGFCQSRTLAVHKTLH 96

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 12/128 (9%)
Query: 228 IHNGIKPFLCSMCA-----KCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNR 280
           IH   K F+C         + F  +  L  HM+ H G K + CT   C K ++R ++L  
Sbjct: 28  IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKT 87
Query: 281 HMRNHDGLKPFHCS--VCFESFTQKALLNIHL-RIHTNSKPHACSI--CTESFSQKSNLY 335
           H+R+H G KP+ C    C ++F+  +    H  R H+N KP+ C +  CT+ ++  S+L 
Sbjct: 88  HLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR 147
Query: 336 IHLKLQHG 343
            H+K  HG
Sbjct: 148 KHVKTVHG 155

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 32/138 (23%)
Query: 293 CSVCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGVNPFKCD 350
           CS     F  + +L +H+R HT  KPH C+   C +S+S+  NL  HL+   G  P+ C+
Sbjct: 42  CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE 101
Query: 351 VCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSH-NVNPFKCDI- 408
                                         C + F   S   +H   +H N  P+ C + 
Sbjct: 102 H---------------------------EGCSKAFSNASDRAKHQNRTHSNEKPYVCKLP 134
Query: 409 -CFKLFTKKSNLRTHIKT 425
            C K +T  S+LR H+KT
Sbjct: 135 GCTKRYTDPSSLRKHVKT 152

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           KP++C  C  SF  + NL  H  +H G +P++CN+C   F   ++L  H+RIH+G KP
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP 346
           KP+ C  C  SF  K  L  H  +HT  KP+ C+IC   F++ +NL  H ++  G  P
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 374 KPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH 426
           KP+KC  C   F  K  L  H  V     P++C+IC   F + +NL+TH + H
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKP 318
           +RY C  C K F+   DL++H R H G KP+ C  C ++F Q++ L  H R+HT S P
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 347 FKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNP 403
           +KCD C  ++F   + LS H RT  G KP+KC  C + F ++S L  H RV     P
Sbjct: 19  YKCDEC-GKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 153 CSVCSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCN 210
           C    K+F  K K   H+R H G KPF C    C + F +  NL IH R H G +PF+C 
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124
Query: 211 V--CYICFTNKSDLNRHSRIHNGIK 233
              C   F N SD  +H  +H   K
Sbjct: 125 FEGCDRRFANSSDRKKHMHVHTSDK 149

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 237 CSMCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           C    K F  K  L  H+++H G K + C    C K F R ++L  H R H G KPF C 
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124
Query: 295 V--CFESFTQKALLNIHLRIHTNSK 317
              C   F   +    H+ +HT+ K
Sbjct: 125 FEGCDRRFANSSDRKKHMHVHTSDK 149

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 298 ESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGVNPFKCD 350
           +SF  K  L  H+R+HT  KP  C    C + F++  NL IH +   G  PFKC+
Sbjct: 70  KSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 321 CSICTESFSQKSNLYIHLKLQHGVNPFKCDVCP-NETFEKETQLSLHMRTVHGVKPFKCS 379
           C    +SF  K  L  H+++  G  PF C      + F +   L +H RT  G KPFKC 
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124
Query: 380 M--CDEGFPKKSVLKEHLRV 397
              CD  F   S  K+H+ V
Sbjct: 125 FEGCDRRFANSSDRKKHMHV 144

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 205 RPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHE 258
           RPF CN C   + + S L+RH R H G +P  C  C KCF  + ++NRH+K+H+
Sbjct: 3   RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQ 56

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 263 YLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTN 315
           + C  C K +     L+RH R H G +P  C  C + F  ++ +N HL++H N
Sbjct: 5   FFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN 57

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 204 IRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKI 256
           ++PFQC +C   F+    L  H R H G KPF C +C + F+R D+  RH  I
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI 53

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 288 LKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQH 342
           +KPF C +C  +F++   L  H+R HT  KP AC IC   F++      H  +QH
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 373 VKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTH--IKTHEPIP 430
           +KPF+C +C   F +   L  H+R      PF CDIC + F +    + H  I+   PI 
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPIL 60
Query: 431 CDKCPEIFEKKTDLQEHVDKCHNL 454
            DK  E+  K   L+  V +   L
Sbjct: 61  EDKVEELLSKNYHLENEVARLKKL 84

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 232 IKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
           ++P+ C +  C + FSR D+L RH++IH G K + C +C + F+R D L  H+R H
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 263 YLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHT 314
           Y C +  C + F+R D+L RH+R H G KPF C +C  +F++   L  H+R HT
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 370 VHGVKPFKCSM--CDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH 426
           V  ++P+ C +  CD  F +   L  H+R+     PF+C IC + F++  +L THI+TH
Sbjct: 14  VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|2I99|A Chain A, Crystal Structure Of Human Mu_crystallin At 2.6 Angstrom Length = 312

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 511 EDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDS 570
           ++A   AD+++T T ++ P+L  EW+K   AHINAVGA      ELD  +   + ++ DS
Sbjct: 191 QEAVAGADVIITVTLATEPILFGEWVKP-GAHINAVGASRPDWRELDDELMKEAVLYVDS 249
Query: 571 EAAARGE 577
           + AA  E
Sbjct: 250 QEAALKE 256

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNS 316
           K Y C  C K F+R   L +H R H G KP+ C  C ++F+Q + L  H RIHT+ 
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG 68

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 374 KPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIP 430
           KP+ C  C + F + S+L +H RV     P+KC  C K F++ S L  H + H   P
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP 69

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 77/204 (37%), Gaps = 36/204 (17%)
Query: 261 KRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHC--SVCFESFTQKALLNIHLRIHTNS 316
           KRY+C+   C   + +   L  H+  H G KPF C    C + FT    L  H   HT  
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70
Query: 317 KPHACSI--CTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVK 374
           K   C    C   F+ K+N+  H    H +      VC  E                   
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIK-ICVYVCHFEN------------------ 111
Query: 375 PFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC--DICFKLFTKKSNLRTHIKTHEPIPC- 431
                 C + F K + LK H        P++C  + C K F+  S L+ H K H   PC 
Sbjct: 112 ------CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCK 165
Query: 432 --DKCPEIFEKKTDLQEHVDKCHN 453
             D C  + +  T   +HV +CH 
Sbjct: 166 KDDSCSFVGKTWTLYLKHVAECHQ 189

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRN-HDG 287
           F+C +C + F+R++ L RH + H   K Y C +C + FTR+D L RH +  H G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 291 FHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVN 345
           F C VC  +F ++  L  H R HTN KP+ C +C  +F+++  L  H +  H  N
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 293 CSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQH 342
           CS C + F     LNIHLR HT  KP+ C  C  + +QK++L  HL+  H
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH 56

>pdb|1VLL|A Chain A, Crystal Structure Of Alanine Dehydrogenase (Af1665) From Archaeoglobus Fulgidus At 2.80 A Resolution Length = 334

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 511 EDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDS 570
           E+A+R  D+LVT T S  PV+K EW+ ++  HINA+GA      ELD  I   + I  D 
Sbjct: 195 EEASR-CDVLVTTTPSRKPVVKAEWV-EEGTHINAIGADGPGKQELDVEILKKAKIVVDD 252
Query: 571 EAAAR--GEL-----KGL--YEQVPANMVGEVGGLIAANLTRDARYPLTVFHSMGV 617
              A+  GE+     KG+   E V A  +GEV  +      R++   +T+F S G+
Sbjct: 253 LEQAKHGGEINVAVSKGVIGVEDVHAT-IGEV--IAGLKDGRESDEEITIFDSTGL 305

>pdb|1OMO|A Chain A, Alanine Dehydrogenase Dimer WBOUND NAD (ARCHAEAL) Length = 322

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 511 EDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDS 570
           E+A+R  D+LVT T S  PV+K EW+ ++  HINA+GA      ELD  I   + I  D 
Sbjct: 183 EEASR-CDVLVTTTPSRKPVVKAEWV-EEGTHINAIGADGPGKQELDVEILKKAKIVVDD 240
Query: 571 EAAAR--GEL-----KGL--YEQVPANMVGEVGGLIAANLTRDARYPLTVFHSMGV 617
              A+  GE+     KG+   E V A  +GEV  +      R++   +T+F S G+
Sbjct: 241 LEQAKHGGEINVAVSKGVIGVEDVHAT-IGEV--IAGLKDGRESDEEITIFDSTGL 293

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 228 IHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDG 287
           I +G   ++C +C + +     L RH  IH   K+Y C  C K F   +   +H  +H G
Sbjct: 16  IVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTG 75
Query: 288 LKPFHCSVCFESFTQKALLNIHLR 311
            + + C  C +SF     ++ H++
Sbjct: 76  ERRYQCLACGKSFINYQFMSSHIK 99

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 149 KVFLCSV--CSKTFTDKVKFNRHMRAHEGIKPFQC--SVCSESFTQRSNLNIHLRIHDGI 204
           K ++CS   C   +    K   H+  H G KPF C    C + FT   +L  H   H G 
Sbjct: 2   KRYICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 61
Query: 205 RPFQCNV--CYICFTNKSDLNRH-SRIHN 230
           + F C+   C + FT K+++ +H +R HN
Sbjct: 62  KNFTCDSDGCDLRFTTKANMKKHFNRFHN 90

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSK----RYLCTMCPKCFTRKDDLNRH 281
            R H G KP+ CS C K F +K  L+ H K +         ++C+ C K FTR++ + RH
Sbjct: 7   GRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66
Query: 282 MRN 284
             N
Sbjct: 67  ADN 69

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIH-LRIHT-NSKPHACSICTESFSQKSNLYIHLKL 340
           R H G KP+ C +C   FTQ   + +H L+ HT N     C  C    ++KS+L +HL+ 
Sbjct: 8   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK 67
Query: 341 QH 342
           QH
Sbjct: 68  QH 69

>pdb|2EP2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 603- 635) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 25/30 (83%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRP 206
           KP++CS+C +SFT++S L++H +IH G +P
Sbjct: 11  KPYECSICGKSFTKKSQLHVHQQIHTGEKP 40

>pdb|2EP2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 603- 635) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
           KP+ CS+C +SFT+K+ L++H +IHT  KP   S
Sbjct: 11  KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>pdb|2EML|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 752- 784) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRP 206
           KP++CSVC ++F+ R +L++H RIH G +P
Sbjct: 11  KPYECSVCGKAFSHRQSLSVHQRIHSGKKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	617
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-57
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-56
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-53
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-46
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-40
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-40
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-20
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-44
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-36
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-30
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-30
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-37
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-35
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-28
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-36
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-34
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-31
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-29
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-35
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-34
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-29
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-31
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-30
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-30
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-25
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-21
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-31
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-30
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-27
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-26
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-23
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-30
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-30
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-29
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-27
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-21
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-30
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-30
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-29
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-27
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-25
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-19
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-15
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-28
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-27
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-27
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-26
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-25
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-21
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-21
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-15
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-12
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-27
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-24
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-24
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-23
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-21
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-19
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-14
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-27
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-24
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-22
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-26
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-25
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	9e-24
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-15
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-13
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-25
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-21
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-20
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-19
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-15
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	9e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-25
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-23
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-21
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-17
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-13
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	3e-24
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-23
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-21
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-21
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-20
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-16
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-23
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-23
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-23
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-20
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-19
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-18
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	9e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-10
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	3e-22
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-22
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-18
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-16
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-08
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	1e-21
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	3e-20
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-20
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-18
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-16
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-15
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-12
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-11
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-20
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-20
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-19
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-18
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-16
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-15
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-20
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-19
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-18
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-17
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-15
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-15
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	9e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	9e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-19
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-18
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-18
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-18
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-16
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-15
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-18
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-17
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-14
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-18
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-15
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	9e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-18
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-14
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-13
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	7e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-14
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-16
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-15
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-15
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-14
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	7e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-12
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-13
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-13
2epa_A	72	Krueppel-like factor 10; transforming growth facto	7e-13
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-12
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-12
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	9e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-11
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	8e-10
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	7e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	7e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	9e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-11
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-10
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-10
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-11
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-10
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-10
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-11
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	8e-11
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-10
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-10
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	4e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-10
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-10
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-10
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-10
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-10
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-10
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-10
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-10
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-10
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-10
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-09
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-08
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-10
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	6e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	6e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-09
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	7e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-10
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-10
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-09
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-10
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-10
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	7e-10
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	6e-07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	9e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	9e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	4e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-10
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-09
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	9e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-07
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-07
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	5e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	8e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	7e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	7e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	8e-06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	9e-05
1paa_A	30	Yeast transcription factor ADR1; transcription reg	4e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	2e-04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	7e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  191 bits (488), Expect = 1e-57
 Identities = 66/179 (36%), Positives = 95/179 (53%)

Query: 159 TFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTN 218
           +               G KP+ C  C +SF++  +L  H R H G +P++C  C   F++
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 219 KSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDL 278
           K DL RH R H G KP+ C  C K FS++ +L  H + H G K Y C  C K F++   L
Sbjct: 62  KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121

Query: 279 NRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH 337
             H R H G KP+ C  C +SF+++  L+ H R HT  KP+ C  C +SFS++  L +H
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  186 bits (476), Expect = 5e-56
 Identities = 67/179 (37%), Positives = 97/179 (54%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLR 199
               +  G K + C  C K+F+       H R H G KP++C  C +SF+ + +L  H R
Sbjct: 11  AQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR 70

Query: 200 IHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEG 259
            H G +P++C  C   F+ +++L  H R H G KP+ C  C K FS+   L  H + H G
Sbjct: 71  THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG 130

Query: 260 SKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKP 318
            K Y C  C K F+R+D+L+ H R H G KP+ C  C +SF+++  LN+H R HT  K 
Sbjct: 131 EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  179 bits (458), Expect = 2e-53
 Identities = 72/189 (38%), Positives = 98/189 (51%), Gaps = 1/189 (0%)

Query: 187 SFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSR 246
           S    S+      +  G +P+ C  C   F+    L  H R H G KP+ C  C K FS 
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 247 KDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALL 306
           K DL RH + H G K Y C  C K F+++ +L  H R H G KP+ C  C +SF+Q A L
Sbjct: 62  KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121

Query: 307 NIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLH 366
             H R HT  KP+ C  C +SFS++ NL+ H +   G  P+KC  C  ++F +   L++H
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPEC-GKSFSRRDALNVH 180

Query: 367 MRTVHGVKP 375
            RT  G K 
Sbjct: 181 QRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  161 bits (409), Expect = 2e-46
 Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 10/194 (5%)

Query: 68  RKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
             +                    GE  + C +C K+F    HL  H ++H+  K ++C +
Sbjct: 5   GSSSSVAQAALEP----------GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPE 54

Query: 128 CRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSES 187
           C   F  K++  RH + H G K + C  C K+F+ +     H R H G KP+ C  C +S
Sbjct: 55  CGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKS 114

Query: 188 FTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRK 247
           F+Q ++L  H R H G +P++C  C   F+ + +L+ H R H G KP+ C  C K FSR+
Sbjct: 115 FSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRR 174

Query: 248 DDLNRHMKIHEGSK 261
           D LN H + H G K
Sbjct: 175 DALNVHQRTHTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  144 bits (367), Expect = 2e-40
 Identities = 75/235 (31%), Positives = 98/235 (41%), Gaps = 60/235 (25%)

Query: 216 FTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRK 275
               S     + +  G KP+ C  C K FSR D L  H + H G K Y C  C K F+ K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 276 DDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLY 335
            DL RH R H G KP+ C  C +SF+Q+A L  H R HT  KP+AC  C +SFSQ ++L 
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 336 IHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHL 395
                                         H RT  G KP+KC  C              
Sbjct: 123 A-----------------------------HQRTHTGEKPYKCPECG------------- 140

Query: 396 RVSHNVNPFKCDICFKLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
                          K F+++ NL TH +TH   +P  C +C + F ++  L  H
Sbjct: 141 ---------------KSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  144 bits (366), Expect = 2e-40
 Identities = 61/180 (33%), Positives = 90/180 (50%), Gaps = 10/180 (5%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K + C  C K ++R + L  H RTH           GE  + C +C K+F DK  L RH 
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQRTHT----------GEKPYKCPECGKSFSDKKDLTRHQ 69

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
           ++H+  K ++C +C   F  +     H + H G K + C  C K+F+       H R H 
Sbjct: 70  RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT 129

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           G KP++C  C +SF++  NL+ H R H G +P++C  C   F+ +  LN H R H G K 
Sbjct: 130 GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 86.7 bits (216), Expect = 6e-20
 Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 32/152 (21%)

Query: 299 SFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFE 358
           S    +       +    KP+AC  C +SFS+  +L                        
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHL------------------------ 37

Query: 359 KETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSN 418
                + H RT  G KP+KC  C + F  K  L  H R      P+KC  C K F++++N
Sbjct: 38  -----AEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRAN 92

Query: 419 LRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
           LR H +TH   +P  C +C + F +   L+ H
Sbjct: 93  LRAHQRTHTGEKPYACPECGKSFSQLAHLRAH 124

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  154 bits (391), Expect = 6e-44
 Identities = 47/186 (25%), Positives = 70/186 (37%), Gaps = 12/186 (6%)

Query: 169 HMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCN--VCYICFTNKSDLNR 224
                   K + CS   C  ++ +   L  HL  H G +PF C    C   FT+   L R
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 225 HSRIHNGIKPFLCS--MCAKCFSRKDDLNRHMKIHEGSKR--YLCTM--CPKCFTRKDDL 278
           HS  H G K F C    C   F+ K ++ +H       K   Y+C    C K F + + L
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122

Query: 279 NRHMRNHDGLKPFHCS--VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYI 336
             H  +H    P+ C    C + F+  + L  H ++H          C+      +    
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182

Query: 337 HLKLQH 342
           H+   H
Sbjct: 183 HVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  133 bits (336), Expect = 3e-36
 Identities = 48/220 (21%), Positives = 63/220 (28%), Gaps = 46/220 (20%)

Query: 74  NHLRTHEAGSGDEKSEGGEGSFTCS--QCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFD 131
                                + CS   C   +   W L  HL  H+  K F C++    
Sbjct: 2   GEKALP----------VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEG-- 49

Query: 132 FYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS--VCSESFT 189
                                   C K FT      RH   H G K F C    C   FT
Sbjct: 50  ------------------------CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFT 85

Query: 190 QRSNLNIHLRIHDG--IRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCS--MCAKC 243
            ++N+  H        I  + C+   C   F   + L  H   H    P+ C    C K 
Sbjct: 86  TKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKR 145

Query: 244 FSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMR 283
           FS    L RH K+H G        C           +H+ 
Sbjct: 146 FSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 185

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  117 bits (296), Expect = 1e-30
 Identities = 52/242 (21%), Positives = 77/242 (31%), Gaps = 68/242 (28%)

Query: 225 HSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCT--MCPKCFTRKDDLNR 280
              +    K ++CS   C   +++   L  H+  H G K + C    C K FT    L R
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 281 HMRNHDGLKPFHCS--VCFESFTQKALLNIHLRIHTNSK--PHACSI--CTESFSQKSNL 334
           H   H G K F C    C   FT KA +  H     N K   + C    C ++F + + L
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122

Query: 335 YIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEH 394
            +H                               +     P++C                
Sbjct: 123 KVH-----------------------------QFSHTQQLPYEC---------------- 137

Query: 395 LRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVDKC 451
                       + C K F+  S L+ H K H        D C  + +  T   +HV +C
Sbjct: 138 ----------PHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAEC 187

Query: 452 HN 453
           H 
Sbjct: 188 HQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  115 bits (290), Expect = 6e-30
 Identities = 49/215 (22%), Positives = 74/215 (34%), Gaps = 47/215 (21%)

Query: 55  KKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWHL 110
           K++ C+   C   Y +  +L  HL  H           GE  F C +  C K F    HL
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHT----------GEKPFPCKEEGCEKGFTSLHHL 60

Query: 111 NRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHM 170
            RH  +H+  K F C+                             C   FT K    +H 
Sbjct: 61  TRHSLTHTGEKNFTCDSDG--------------------------CDLRFTTKANMKKHF 94

Query: 171 RAHEGIK--PFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCN--VCYICFTNKSDLNR 224
                IK   + C    C ++F + + L +H   H    P++C    C   F+  S L R
Sbjct: 95  NRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKR 154

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMK-IHE 258
           H ++H G        C+          +H+   H+
Sbjct: 155 HEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  134 bits (340), Expect = 2e-37
 Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 4/122 (3%)

Query: 172 AHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSR---I 228
              G    +C  C + F  +  L +H R H G +PF+C  C  C+  K +L  H     +
Sbjct: 1   GSSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHM-RNHDG 287
           +   + F CS+C + F R+ +L  HM  H G   Y C+ C + F +K DL  HM + H G
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

Query: 288 LK 289
             
Sbjct: 121 PS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  129 bits (327), Expect = 1e-35
 Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRN---H 285
            +G     C  C K F  K  L  H + H G K + C  C KC+ RK++L  H      +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 286 DGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH 337
              + F CSVC E+F ++  L +H+  HT   P+ CS C++ F QK +L  H
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  109 bits (275), Expect = 1e-28
 Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 4/121 (3%)

Query: 117 HSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRA---H 173
            S +    C  C   F  K     H + H G K F C  C K +  K     H      +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 174 EGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRH-SRIHNGI 232
              + F CSVC E+F +R  L +H+  H G  P++C+ C   F  K DL  H  ++H+G 
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121

Query: 233 K 233
            
Sbjct: 122 S 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 82.2 bits (204), Expect = 6e-19
 Identities = 37/127 (29%), Positives = 50/127 (39%), Gaps = 14/127 (11%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
              +C  C K++  K  L  H R H           GE  F C +C K +  K +L  H 
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHT----------GEKPFECPKCGKCYFRKENLLEHE 55

Query: 115 KS---HSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHM- 170
                +   +VF C  C+  F  + E   HM  H G   + CS CS+ F  K     HM 
Sbjct: 56  ARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115

Query: 171 RAHEGIK 177
           + H G  
Sbjct: 116 KLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 76.0 bits (188), Expect = 8e-17
 Identities = 38/147 (25%), Positives = 56/147 (38%), Gaps = 37/147 (25%)

Query: 313 HTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHG 372
            + S    C  C + F  K  L                              +H R   G
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYL-----------------------------KVHNRKHTG 32

Query: 373 VKPFKCSMCDEGFPKKSVLKEHLRVSHNVN----PFKCDICFKLFTKKSNLRTHIKTH-- 426
            KPF+C  C + + +K  L EH    + +N     F C +C + F ++  LR H+ +H  
Sbjct: 33  EKPFECPKCGKCYFRKENLLEHEA-RNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91

Query: 427 -EPIPCDKCPEIFEKKTDLQEHVDKCH 452
             P  C  C + F +K DLQ H+ K H
Sbjct: 92  EMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  133 bits (336), Expect = 1e-36
 Identities = 37/152 (24%), Positives = 51/152 (33%), Gaps = 13/152 (8%)

Query: 156 CSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQ------- 208
              +     +        E         C  +F+    L  H+ +     P Q       
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 209 --CNVCYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYL 264
             C      F  K  L  H R+H G KPF C    C K F+R ++L  H + H G K + 
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 265 CTM--CPKCFTRKDDLNRHMRNHDGLKPFHCS 294
           C    C + F    D  +HM  H   K    S
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  125 bits (316), Expect = 6e-34
 Identities = 36/140 (25%), Positives = 52/140 (37%), Gaps = 13/140 (9%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQ---------CSVCSESFTQ 190
               I +         C +TF+   +   H+       P Q         C    +SF  
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74

Query: 191 RSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSR 246
           +  L  H+R+H G +PF C    C   F    +L  H R H G KPF C    C + F+ 
Sbjct: 75  KYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFAN 134

Query: 247 KDDLNRHMKIHEGSKRYLCT 266
             D  +HM +H   K    +
Sbjct: 135 SSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  118 bits (298), Expect = 2e-31
 Identities = 41/181 (22%), Positives = 56/181 (30%), Gaps = 33/181 (18%)

Query: 62  CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENK 121
                    +  +     E           + S     C +TF     L  H+       
Sbjct: 3   SGSSGQPIKQELSCKWIDE----------AQLSRPKKSCDRTFSTMHELVTHVTMEHVGG 52

Query: 122 VFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
             +     +                      C    K+F  K K   H+R H G KPF C
Sbjct: 53  PEQNNHVCY-------------------WEECPREGKSFKAKYKLVNHIRVHTGEKPFPC 93

Query: 182 SV--CSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLC 237
               C + F +  NL IH R H G +PF+C    C   F N SD  +H  +H   K    
Sbjct: 94  PFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

Query: 238 S 238
           S
Sbjct: 154 S 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  112 bits (282), Expect = 3e-29
 Identities = 37/155 (23%), Positives = 54/155 (34%), Gaps = 17/155 (10%)

Query: 241 AKCFSRKDDLNRHMK---IHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFH----- 292
               S    + + +    I E         C + F+   +L  H+       P       
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 293 ----CSVCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGVNP 346
               C    +SF  K  L  H+R+HT  KP  C    C + F++  NL IH +   G  P
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP 120

Query: 347 FKCDV--CPNETFEKETQLSLHMRTVHGVKPFKCS 379
           FKC+   C +  F   +    HM      K    S
Sbjct: 121 FKCEFEGC-DRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 24/107 (22%), Positives = 35/107 (32%), Gaps = 14/107 (13%)

Query: 355 ETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFK--------- 405
            + +   Q                  CD  F     L  H+ + H   P +         
Sbjct: 5   SSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE 64

Query: 406 CDICFKLFTKKSNLRTHIKTH---EPIPCDK--CPEIFEKKTDLQEH 447
           C    K F  K  L  HI+ H   +P PC    C +IF +  +L+ H
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH 111

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  128 bits (323), Expect = 8e-35
 Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 15/153 (9%)

Query: 177 KPFQCSVCSESFTQRSNLNIHL---RIHDGIRPFQCNVCYI-----CFTNKSDLNRHSRI 228
              +   CS+ F  +  L  H+    IH   + F C+          F  +  L  H R 
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 229 HNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCT--MCPKCFTRKDDLNRHM-R 283
           H G KP  C+   C K +SR ++L  H++ H G K Y+C    C K F+   D  +H  R
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR 121

Query: 284 NHDGLKPFHCSV--CFESFTQKALLNIHLRIHT 314
            H   KP+ C +  C + +T  + L  H++   
Sbjct: 122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  125 bits (317), Expect = 6e-34
 Identities = 49/175 (28%), Positives = 73/175 (41%), Gaps = 33/175 (18%)

Query: 95  FTCSQCPKTFVDKWHLNRHLKS---HSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVF 151
                C + F  +  L  H+ S   H E K F C                          
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG---------------------- 41

Query: 152 LCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQC 209
            CS   + F  +     HMR H G KP +C+   C +S+++  NL  HLR H G +P+ C
Sbjct: 42  -CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMC 100

Query: 210 N--VCYICFTNKSDLNRH-SRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEG 259
               C   F+N SD  +H +R H+  KP++C +  C K ++    L +H+K   G
Sbjct: 101 EHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  111 bits (280), Expect = 7e-29
 Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 16/155 (10%)

Query: 233 KPFLCSMCAKCFSRKDDLNRHMK---IHEGSKRYLCTMC-----PKCFTRKDDLNRHMRN 284
                  C++ F  ++ L  H+    IH   K ++C         + F  +  L  HMR 
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 285 HDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHAC--SICTESFSQKSNLYIHLKL 340
           H G KP  C+   C +S+++   L  HLR HT  KP+ C    C+++FS  S+   H   
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR 121

Query: 341 QH-GVNPFKCDV--CPNETFEKETQLSLHMRTVHG 372
            H    P+ C +  C  + +   + L  H++TVHG
Sbjct: 122 THSNEKPYVCKLPGC-TKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 28/127 (22%), Positives = 42/127 (33%), Gaps = 43/127 (33%)

Query: 55  KKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWHL 110
           K  KC    C K Y+R   L  HLR+H           GE  + C    C K F +    
Sbjct: 66  KPHKCTFEGCRKSYSRLENLKTHLRSHT----------GEKPYMCEHEGCSKAFSNASDR 115

Query: 111 NRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSV--CSKTFTDKVKFNR 168
            +H                             + H   K ++C +  C+K +TD     +
Sbjct: 116 AKH---------------------------QNRTHSNEKPYVCKLPGCTKRYTDPSSLRK 148

Query: 169 HMRAHEG 175
           H++   G
Sbjct: 149 HVKTVHG 155

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  117 bits (296), Expect = 1e-31
 Identities = 41/106 (38%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query: 156 CSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCY 213
           C+K +        H R H G KP+QC    C   F++   L  H R H G++PFQC  C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73

Query: 214 ICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIH 257
             F+    L  H+R H G KPF C    C K F+R D+L RH  +H
Sbjct: 74  RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  114 bits (287), Expect = 3e-30
 Identities = 45/115 (39%), Positives = 55/115 (47%), Gaps = 6/115 (5%)

Query: 205 RPFQCN--VCYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGS 260
           RPF C    C   +   S L  HSR H G KP+ C    C + FSR D L RH + H G 
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIH 313
           K + C  C + F+R D L  H R H G KPF C    C + F +   L  H  +H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  113 bits (286), Expect = 4e-30
 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 233 KPFLCS--MCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGL 288
           +PF+C+   C K + +   L  H + H G K Y C    C + F+R D L RH R H G+
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIH 337
           KPF C  C   F++   L  H R HT  KP +C    C + F++   L  H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 98.7 bits (247), Expect = 7e-25
 Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 6/115 (5%)

Query: 121 KVFRCEQ--CRFDFYVKREYNRHMKIHDGVKVFLCSV--CSKTFTDKVKFNRHMRAHEGI 176
           + F C    C   ++       H + H G K + C    C + F+   +  RH R H G+
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIH 229
           KPFQC  C   F++  +L  H R H G +PF C    C   F    +L RH  +H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 87.2 bits (217), Expect = 9e-21
 Identities = 39/144 (27%), Positives = 51/144 (35%), Gaps = 35/144 (24%)

Query: 289 KPFHCS--VCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGV 344
           +PF C+   C + + + + L +H R HT  KP+ C    C   FS+   L          
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQL---------- 54

Query: 345 NPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPF 404
                                H R   GVKPF+C  C   F +   LK H R      PF
Sbjct: 55  -------------------KRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPF 95

Query: 405 KCDI--CFKLFTKKSNLRTHIKTH 426
            C    C K F +   L  H   H
Sbjct: 96  SCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 84.1 bits (209), Expect = 9e-20
 Identities = 39/153 (25%), Positives = 50/153 (32%), Gaps = 44/153 (28%)

Query: 55  KKFKCN--ICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCS--QCPKTFVDKWHL 110
           + F C    C KRY + + L  H R H           GE  + C    C + F     L
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHT----------GEKPYQCDFKDCERRFSRSDQL 54

Query: 111 NRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHM 170
                                        RH + H GVK F C  C + F+       H 
Sbjct: 55  ----------------------------KRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHT 86

Query: 171 RAHEGIKPFQCSV--CSESFTQRSNLNIHLRIH 201
           R H G KPF C    C + F +   L  H  +H
Sbjct: 87  RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  116 bits (292), Expect = 5e-31
 Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 7/121 (5%)

Query: 149 KVFLCSV--CSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRP 206
           +   C    C+K F D     +H+  H G +   C+ C ++F + S L  H  +H G +P
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62

Query: 207 FQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKR 262
           FQC    C   F+   +L  H RIH G +P++C    C K F++  +L  H+  H  +K 
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122

Query: 263 Y 263
            
Sbjct: 123 N 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  114 bits (287), Expect = 3e-30
 Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 7/121 (5%)

Query: 205 RPFQC--NVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKR 262
           R   C    C   F + S + +H   H G +  +C+ C K F     L RH  +H G K 
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62

Query: 263 YLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKP 318
           + CT   C K F+   +L  H+R H G +P+ C    C + F Q   L  H+  H  +K 
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122

Query: 319 H 319
           +
Sbjct: 123 N 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  105 bits (264), Expect = 4e-27
 Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 7/123 (5%)

Query: 119 ENKVFRC--EQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGI 176
           E +   C  + C   F       +H+  H G +V +C+ C K F +  K  RH   H G 
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGE 60

Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGI 232
           KPFQC+   C + F+   NL  H+RIH G RP+ C    C   F   ++L  H   H   
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 120

Query: 233 KPF 235
           K  
Sbjct: 121 KNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  101 bits (254), Expect = 9e-26
 Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 7/120 (5%)

Query: 95  FTCSQ--CPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFL 152
             C    C K F D   + +HL +H   +V  C +C   F    +  RH  +H G K F 
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64

Query: 153 CSV--CSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQ 208
           C+   C K F+       H+R H G +P+ C    C++ F Q +NL  H+  H   +  Q
Sbjct: 65  CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 94.9 bits (237), Expect = 2e-23
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 8/123 (6%)

Query: 261 KRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKP 318
           +   C    C K F     + +H+  H G +   C+ C ++F + + L  H  +HT  KP
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62

Query: 319 HACSI--CTESFSQKSNLYIHLKLQHGVNPFKCDV--CPNETFEKETQLSLHMRTVHGVK 374
             C+   C + FS   NL  H+++  G  P+ C    C N+ F + T L  H+ T    K
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGC-NKKFAQSTNLKSHILTHAKAK 121

Query: 375 PFK 377
             +
Sbjct: 122 NNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 63.7 bits (156), Expect = 1e-12
 Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 11/111 (9%)

Query: 346 PFKCDV--CPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNP 403
              C    C  + F   + +  H+ T HG +   C+ C + F + S LK H  V     P
Sbjct: 5   TIACPHKGC-TKMFRDNSAMRKHLHT-HGPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62

Query: 404 FKCDI--CFKLFTKKSNLRTHIKTH---EPIPC--DKCPEIFEKKTDLQEH 447
           F+C    C K F+   NLRTH++ H    P  C  D C + F + T+L+ H
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  114 bits (289), Expect = 1e-30
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 3/110 (2%)

Query: 170 MRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIH 229
                G K + C  C +SFT +S  + H+ +H G+RP+ C VC   F  K  L  H +IH
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 230 NGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLN 279
            GIKP+ C++CAK F  +D  +RH  +   +K Y      +  T     +
Sbjct: 61  TGIKPYECNICAKRFMWRDSFHRH--VTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  112 bits (284), Expect = 5e-30
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
           S   +G K + C  C K F+ K   +RHM +H G + Y C +C K F  K  L  HM+ H
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 286 DGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNL 334
            G+KP+ C++C + F  +     H  + + +K +  +   ++ ++ S  
Sbjct: 61  TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  109 bits (275), Expect = 9e-29
 Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 3/110 (2%)

Query: 142 MKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
                G K++ C  C K+FT K + +RHM  H G++P+ C VC + F  + +L  H++IH
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 202 DGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLN 251
            GI+P++CN+C   F  +     H  + +  K +  +   +  +     +
Sbjct: 61  TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  105 bits (265), Expect = 2e-27
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 3/109 (2%)

Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHE 258
               G + + C  C   FT+KS  +RH  +H G++P+ C +C K F  K  L  HMKIH 
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 259 GSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLN 307
           G K Y C +C K F  +D    H       K +  +   ++ T+ +  +
Sbjct: 62  GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 93.3 bits (233), Expect = 4e-23
 Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 32/138 (23%)

Query: 254 MKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIH 313
                G K Y C  C K FT K   +RHM  H GL+P+ C VC + F  K  L  H++IH
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 314 TNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGV 373
           T  KP+ C+IC + F  +                                S H       
Sbjct: 61  TGIKPYECNICAKRFMWRD-------------------------------SFHRHVTSCT 89

Query: 374 KPFKCSMCDEGFPKKSVL 391
           K ++ +  ++   + S  
Sbjct: 90  KSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 88.7 bits (221), Expect = 2e-21
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
              S +K++ C+ C   F  K + +RHM +H G++ + C VC K F  K     HM+ H 
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLN 223
           GIKP++C++C++ F  R +   H  +    + ++        T  S  +
Sbjct: 62  GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 79.0 bits (196), Expect = 4e-18
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 91  GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKV 150
           G+  + C QC K+F  K   +RH+  H   + + C  C   F +K     HMKIH G+K 
Sbjct: 7   GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP 65

Query: 151 FLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLN 195
           + C++C+K F  +  F  H       K ++ +   ++ T+ S  +
Sbjct: 66  YECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 64.4 bits (158), Expect = 6e-13
 Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 31/135 (22%)

Query: 311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTV 370
              +  K + C  C +SF+ KS                                 HM   
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQR-----------------------------DRHMSMH 32

Query: 371 HGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHE-PI 429
            G++P+ C +C + F  K  L  H+++   + P++C+IC K F  + +   H+ +     
Sbjct: 33  LGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSY 92

Query: 430 PCDKCPEIFEKKTDL 444
              K  +   + +  
Sbjct: 93  EAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 46.3 bits (111), Expect = 1e-06
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 12/74 (16%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           + + C +C K++  K+ L  H++ H           G   + C+ C K F+ +   +RH+
Sbjct: 36  RPYGCGVCGKKFKMKHHLVGHMKIHT----------GIKPYECNICAKRFMWRDSFHRHV 85

Query: 115 KSHSENKVFRCEQC 128
              S  K +   + 
Sbjct: 86  --TSCTKSYEAAKA 97

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  114 bits (287), Expect = 2e-30
 Identities = 29/104 (27%), Positives = 44/104 (42%)

Query: 219 KSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDL 278
            S  +         K F+C  C + F++  +L  H + H   + Y C +C K F R+D L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 279 NRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
             H   H   KPF C  C + F Q   L +H  +H  +     +
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  114 bits (287), Expect = 2e-30
 Identities = 31/100 (31%), Positives = 43/100 (43%)

Query: 167 NRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHS 226
           +      +  K F C  C   FT+  NL IH R H   RP+ C++C+  F  +  L  H 
Sbjct: 6   SGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65

Query: 227 RIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
            IH+  KPF C  C K F +   L  H  +H  +      
Sbjct: 66  YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  111 bits (281), Expect = 1e-29
 Identities = 29/103 (28%), Positives = 39/103 (37%)

Query: 192 SNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLN 251
           S  +         + F C  C   FT   +L  H R H   +P+ C +C K F R+D L 
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
            H  IH   K + C  C K F +   L  H   H        +
Sbjct: 63  DHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  103 bits (260), Expect = 8e-27
 Identities = 25/100 (25%), Positives = 40/100 (40%)

Query: 139 NRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHL 198
           +         K F+C  C + FT       H R H   +P+ C +C ++F ++ +L  H 
Sbjct: 6   SGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65

Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
            IH   +PF+C  C   F     L  H  +H        +
Sbjct: 66  YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 98.7 bits (247), Expect = 5e-25
 Identities = 26/101 (25%), Positives = 44/101 (43%)

Query: 249 DLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNI 308
             +      +  K ++C  C + FT+  +L  H R H   +P+ C +C ++F ++  L  
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
           H  IH+  KP  C  C + F Q   L +H  L    +    
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 92.1 bits (230), Expect = 1e-22
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 1/103 (0%)

Query: 277 DLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYI 336
             +         K F C  C   FT+   L IH R HT+ +P+ C IC ++F ++ +L  
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 337 HLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCS 379
           H  +     PFKC  C  + F +   L++H            +
Sbjct: 64  HRYIHSKEKPFKCQEC-GKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 83.6 bits (208), Expect = 1e-19
 Identities = 23/139 (16%), Positives = 38/139 (27%), Gaps = 38/139 (27%)

Query: 72  LTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFD 131
            +      +           +  F C  C + F   ++L                     
Sbjct: 5   SSGGRLPSK----------TKKEFICKFCGRHFTKSYNL--------------------- 33

Query: 132 FYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQR 191
                    H + H   + + C +C K F  +     H   H   KPF+C  C + F Q 
Sbjct: 34  -------LIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQS 86

Query: 192 SNLNIHLRIHDGIRPFQCN 210
             L +H  +H         
Sbjct: 87  RTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 70.2 bits (173), Expect = 5e-15
 Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 29/121 (23%)

Query: 306 LNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSL 365
            +         K   C  C   F++  NL                              +
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNL-----------------------------LI 35

Query: 366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKT 425
           H RT    +P+ C +C + F ++  L++H  +     PFKC  C K F +   L  H   
Sbjct: 36  HERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTL 95

Query: 426 H 426
           H
Sbjct: 96  H 96

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  108 bits (273), Expect = 1e-28
 Identities = 28/93 (30%), Positives = 45/93 (48%)

Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGI 232
                P +C VC + F+++  L  H+R H G++P++C  C     + S LN+H RIH+  
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
           +PF C +C         L  H++ H G      
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  105 bits (264), Expect = 2e-27
 Identities = 34/93 (36%), Positives = 44/93 (47%)

Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGL 288
                P  C +C KCFSRKD L  HM+ H G K Y C  C         LN+H+R H   
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
           +PF C +C  +    + L +HLR HT     + 
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  104 bits (263), Expect = 3e-27
 Identities = 29/93 (31%), Positives = 42/93 (45%)

Query: 201 HDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGS 260
                P +C VC  CF+ K  L  H R H G+KP+ C  C    +    LN+H++IH   
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
           + + C +CP        L  H+R+H G      
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  103 bits (259), Expect = 1e-26
 Identities = 36/93 (38%), Positives = 44/93 (47%)

Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGI 204
                   C VC K F+ K K   HMR H G+KP++C  C  +    S+LN HLRIH   
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 205 RPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
           RPF+C +C     N S L  H R H G      
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 97.9 bits (245), Expect = 7e-25
 Identities = 35/93 (37%), Positives = 49/93 (52%)

Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNS 316
              S  + C +C KCF+RKD L  HMR H G+KP+ C  C  +    + LN HLRIH++ 
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 317 KPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
           +P  C IC  +    S L +HL+   G +    
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 87.5 bits (218), Expect = 3e-21
 Identities = 30/94 (31%), Positives = 42/94 (44%)

Query: 116 SHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG 175
           S   +   +CE C   F  K +   HM+ H GVK + C  C     D    N+H+R H  
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 176 IKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
            +PF+C +C  +    S L +HLR H G      
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 86.7 bits (216), Expect = 6e-21
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGV 344
                P  C VC + F++K  L  H+R HT  KP+ C  C  + +  S+L  HL++    
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 345 NPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKC 378
            PFKC +CP       +QL++H+R+  G      
Sbjct: 63  RPFKCQICP-YASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 71.7 bits (177), Expect = 1e-15
 Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 29/114 (25%)

Query: 313 HTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHG 372
             +S PH C +C + FS+K  L                               HMR   G
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKL-----------------------------KTHMRCHTG 33

Query: 373 VKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH 426
           VKP+KC  CD      S L +HLR+  +  PFKC IC       S L  H+++H
Sbjct: 34  VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 63.2 bits (155), Expect = 1e-12
 Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 38/127 (29%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
              KC +C K ++RK++L  H+R H           G   + C  C     D   L    
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRCHT----------GVKPYKCKTCDYAAADSSSL---- 52

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
                                   N+H++IH   + F C +C     +  +   H+R+H 
Sbjct: 53  ------------------------NKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHT 88

Query: 175 GIKPFQC 181
           G      
Sbjct: 89  GDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 59.7 bits (146), Expect = 2e-11
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 372 GVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH---EP 428
              P KC +C + F +K  LK H+R    V P+KC  C       S+L  H++ H    P
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP 64

Query: 429 IPCDKCPEIFEKKTDLQEH 447
             C  CP      + L  H
Sbjct: 65  FKCQICPYASRNSSQLTVH 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  104 bits (262), Expect = 3e-27
 Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 2/87 (2%)

Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
           +P+ C V  C   F+Q  +L  H+RIH G +PFQC +C   F+    L  H R H G KP
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSK 261
           F C +C + F+R D+  RH KIH   K
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 97.2 bits (243), Expect = 1e-24
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
           +P+ C +  C + FS+   L RH++IH G K + C +C + F+R D L  H+R H G KP
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 291 FHCSVCFESFTQKALLNIHLRIHTNSK 317
           F C +C   F +      H +IH   K
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 95.2 bits (238), Expect = 5e-24
 Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 205 RPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKR 262
           RP+ C V  C   F+    L RH RIH G KPF C +C + FSR D L  H++ H G K 
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 263 YLCTMCPKCFTRKDDLNRHMRNHDGLK 289
           + C +C + F R D+  RH + H   K
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 92.5 bits (231), Expect = 4e-23
 Identities = 29/78 (37%), Positives = 44/78 (56%)

Query: 156 CSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYIC 215
           C + F+      RH+R H G KPFQC +C  +F++  +L  H+R H G +PF C++C   
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71

Query: 216 FTNKSDLNRHSRIHNGIK 233
           F    +  RH++IH   K
Sbjct: 72  FARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 86.0 bits (214), Expect = 8e-21
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 261 KRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKP 318
           + Y C +  C + F++   L RH+R H G KPF C +C  +F++   L  H+R HT  KP
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 319 HACSICTESFSQKSNLYIHLK 339
            AC IC   F++      H K
Sbjct: 63  FACDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 81.7 bits (203), Expect = 3e-19
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 2/85 (2%)

Query: 121 KVFRC--EQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKP 178
           + + C  E C   F       RH++IH G K F C +C + F+       H+R H G KP
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 179 FQCSVCSESFTQRSNLNIHLRIHDG 203
           F C +C   F +      H +IH  
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 74.0 bits (183), Expect = 2e-16
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP 346
           +P+ C V  C   F+Q   L  H+RIHT  KP  C IC  +FS+  +L  H++   G  P
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 347 FKCDVCPNETFEKETQLSLHMRT 369
           F CD+C    F +  +   H + 
Sbjct: 63  FACDIC-GRKFARSDERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 67.1 bits (165), Expect = 4e-14
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 95  FTC--SQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFL 152
           + C    C + F     L RH++ H+  K F+C  C  +F        H++ H G K F 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 153 CSVCSKTFTDKVKFNRHMRAHEGIK 177
           C +C + F    +  RH + H   K
Sbjct: 65  CDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 64.4 bits (158), Expect = 3e-13
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 346 PFKCDV--CPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNP 403
           P+ C V  C +  F +   L+ H+R   G KPF+C +C   F +   L  H+R      P
Sbjct: 4   PYACPVESC-DRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 404 FKCDICFKLFTKKSNLRTHIKTH 426
           F CDIC + F +    + H K H
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 62.9 bits (154), Expect = 1e-12
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 12/97 (12%)

Query: 55  KKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNR 112
           + + C +  C +R+++   LT H+R H           G+  F C  C + F    HL  
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHT----------GQKPFQCRICMRNFSRSDHLTT 52

Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVK 149
           H+++H+  K F C+ C   F    E  RH KIH   K
Sbjct: 53  HIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  104 bits (261), Expect = 4e-27
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 172 AHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNG 231
              G     C +C + F    +LN H   H G +P+ C VC + F  K  ++ H R H+G
Sbjct: 1   GSSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 232 --IKPFLCSMCAKCFSRKDDLNRHMK-IHEGSK 261
              KP++C  C K FSR D LN H+K +H G  
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 96.8 bits (242), Expect = 2e-24
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDG- 287
            +G     C +C K F     LNRH   H G K Y C +C   F RKD ++ H+R+HDG 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 288 -LKPFHCSVCFESFTQKALLNIHL-RIHT 314
             KP+ C  C + F++   LN H+ ++H+
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 91.4 bits (228), Expect = 2e-22
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG- 203
             G     C +C K F D    NRH  +H G KP+ C VC   F ++  ++ H+R HDG 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 204 -IRPFQCNVCYICFTNKSDLNRHS-RIHNGIK 233
             +P+ C  C   F+    LN H  ++H+G  
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 73.7 bits (182), Expect = 2e-16
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHG- 343
             G     C +C + F     LN H   H+  KP++C +C   F +K  +  H++   G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 344 -VNPFKCDVCPNETFEKETQLSLHMRTVH 371
              P+ C  C  + F +   L+ H++ VH
Sbjct: 62  VGKPYICQSC-GKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 64.0 bits (157), Expect = 5e-13
 Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 34/118 (28%)

Query: 313 HTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHG 372
            + S   AC IC + F    +L                             + H  +  G
Sbjct: 2   SSGSSGVACEICGKIFRDVYHL-----------------------------NRHKLSHSG 32

Query: 373 VKPFKCSMCDEGFPKKSVLKEHLRVSH---NVNPFKCDICFKLFTKKSNLRTHIK-TH 426
            KP+ C +C   F +K  +  H+R  H      P+ C  C K F++  +L  HIK  H
Sbjct: 33  EKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 61.4 bits (150), Expect = 5e-12
 Identities = 27/150 (18%), Positives = 43/150 (28%), Gaps = 65/150 (43%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
               C IC K +     L  H  +H           GE  ++C  C   F  K  +    
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKLSHS----------GEKPYSCPVCGLRFKRKDRM---- 51

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
                                   + H++ HDG                           
Sbjct: 52  ------------------------SYHVRSHDG--------------------------S 61

Query: 175 GIKPFQCSVCSESFTQRSNLNIHL-RIHDG 203
             KP+ C  C + F++  +LN H+ ++H G
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 54.4 bits (132), Expect = 1e-09
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 5/86 (5%)

Query: 372 GVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH----- 426
           G     C +C + F     L  H        P+ C +C   F +K  +  H+++H     
Sbjct: 4   GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG 63

Query: 427 EPIPCDKCPEIFEKKTDLQEHVDKCH 452
           +P  C  C + F +   L  H+ + H
Sbjct: 64  KPYICQSCGKGFSRPDHLNGHIKQVH 89

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  100 bits (252), Expect = 8e-26
 Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 159 TFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICF 216
           +           R H    P     C++ +T+ S+L  HLR H G +P++C    C   F
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57

Query: 217 TNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHE 258
               +L RH R H G KPF C +C + FSR D L  HMK H+
Sbjct: 58  ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 99.2 bits (248), Expect = 3e-25
 Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 6/101 (5%)

Query: 187 SFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCF 244
           S           RIH    P     C   +T  S L  H R H G KP+ C+   C   F
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57

Query: 245 SRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
           +R D+L RH + H G+K + C +C + F+R D L  HM+ H
Sbjct: 58  ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 95.0 bits (237), Expect = 9e-24
 Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 216 FTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFT 273
             +        RIH    P     C K +++   L  H++ H G K Y CT   C   F 
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 274 RKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTN 315
           R D+L RH R H G KPF C VC  SF++   L +H++ H N
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 84.6 bits (210), Expect = 4e-20
 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 244 FSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFT 301
                      +IH          C K +T+   L  H+R H G KP+ C+   C   F 
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 302 QKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLK 339
           +   L  H R HT +KP  C +C  SFS+  +L +H+K
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK 96

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 70.3 bits (173), Expect = 4e-15
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 7/100 (7%)

Query: 272 FTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFS 329
                      R H    P     C + +T+ + L  HLR HT  KP+ C+   C   F+
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 330 QKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRT 369
           +   L  H +   G  PF+C VC N +F +   L+LHM+ 
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVC-NRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 65.0 bits (159), Expect = 3e-13
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 11/105 (10%)

Query: 327 SFSQKSNLYIHLKLQHGVNPFKCDV--CPNETFEKETQLSLHMRTVHGVKPFKCSM--CD 382
           S           +         CD   C  + + K + L  H+RT  G KP+KC+   CD
Sbjct: 2   SSGSSGPDLEKRR------IHYCDYPGC-TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCD 54

Query: 383 EGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHE 427
             F +   L  H R      PF+C +C + F++  +L  H+K H+
Sbjct: 55  WRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 16/110 (14%)

Query: 67  ARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC- 125
                     R H                    C K +    HL  HL++H+  K ++C 
Sbjct: 4   GSSGPDLEKRRIH--------------YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCT 49

Query: 126 -EQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
            E C + F    E  RH + H G K F C VC+++F+       HM+ H+
Sbjct: 50  WEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 46  ENSSGKKMVKKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCS--QCP 101
            +    +  +   C+   C K Y + + L  HLRTH           GE  + C+   C 
Sbjct: 5   SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHT----------GEKPYKCTWEGCD 54

Query: 102 KTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIH 145
             F     L RH + H+  K F+C  C   F        HMK H
Sbjct: 55  WRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score =   99 bits (250), Expect = 1e-25
 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 26/113 (23%)

Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGI 232
                    + C +++T+ S+L  HLR H G +P+ C+                      
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDG------------------- 42

Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
                  C   F+R D+L RH + H G + + C  C + F+R D L  HM+ H
Sbjct: 43  -------CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 88.7 bits (221), Expect = 1e-21
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHD 286
                    + C K +++   L  H++ H G K Y C    C   F R D+L RH R H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 287 GLKPFHCSVCFESFTQKALLNIHLRIH 313
           G +PF C  C  +F++   L +H++ H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 84.1 bits (209), Expect = 5e-20
 Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 2/87 (2%)

Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHD 202
                    + C KT+T       H+R H G KP+ C    C   F +   L  H R H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 203 GIRPFQCNVCYICFTNKSDLNRHSRIH 229
           G RPFQC  C   F+    L  H + H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 81.8 bits (203), Expect = 3e-19
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHT 314
              +       C K +T+   L  H+R H G KP+HC    C   F +   L  H R HT
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 315 NSKPHACSICTESFSQKSNLYIHLK 339
             +P  C  C  +FS+  +L +H+K
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMK 86

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 70.6 bits (174), Expect = 2e-15
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 2/87 (2%)

Query: 117 HSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSV--CSKTFTDKVKFNRHMRAHE 174
            +         C   +        H++ H G K + C    C   F    +  RH R H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIH 201
           G +PFQC  C  +F++  +L +H++ H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 66.0 bits (162), Expect = 9e-14
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 31/115 (26%)

Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQH 342
                    + C +++T+ + L  HLR HT  KP+ C    C   F++   L        
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDEL-------- 53

Query: 343 GVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRV 397
                                + H R   G +PF+C  CD  F +   L  H++ 
Sbjct: 54  ---------------------TRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 55.2 bits (134), Expect = 6e-10
 Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 12/97 (12%)

Query: 51  KKMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCS--QCPKTFVDKW 108
           +          C K Y + + L  HLRTH           GE  + C    C   F    
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHT----------GEKPYHCDWDGCGWKFARSD 51

Query: 109 HLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIH 145
            L RH + H+ ++ F+C++C   F        HMK H
Sbjct: 52  ELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 98.3 bits (246), Expect = 4e-25
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 176 IKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
           +KPFQC +C  +F++  +L  H+R H G +PF C++C   F    +  RH  I   I P 
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59

Query: 236 LCSMCAKCFSRKDDL---NRHMKIHEGSK 261
           L     +  S+   L      +K   G +
Sbjct: 60  LEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 92.9 bits (232), Expect = 3e-23
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 232 IKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
           +KPF C +C + FSR D L  H++ H G K + C +C + F R D+  RH      + P 
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59

Query: 292 HCSVCFESFTQKALL---NIHLRIHTNSK 317
                 E  ++   L      L+     +
Sbjct: 60  LEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 86.0 bits (214), Expect = 9e-21
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 4/89 (4%)

Query: 148 VKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
           +K F C +C + F+       H+R H G KPF C +C   F +      H  I   I P 
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59

Query: 208 QCNVCYICFTNKSDL---NRHSRIHNGIK 233
             +      +    L       +   G +
Sbjct: 60  LEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 76.8 bits (190), Expect = 2e-17
 Identities = 23/107 (21%), Positives = 34/107 (31%), Gaps = 30/107 (28%)

Query: 288 LKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPF 347
           +KPF C +C  +F++   L  H+R HT  KP AC IC   F++                 
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR----------- 49

Query: 348 KCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEH 394
                             H      + P      +E   K   L+  
Sbjct: 50  ------------------HRDI-QHILPILEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 74.5 bits (184), Expect = 1e-16
 Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 121 KVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQ 180
           K F+C  C  +F        H++ H G K F C +C + F    +  RH      I P  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPIL 60

Query: 181 CSVCSESFTQRSNL---NIHLRIHDG 203
                E  ++  +L      L+   G
Sbjct: 61  EDKVEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 69.4 bits (171), Expect = 5e-15
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 344 VNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNP 403
           + PF+C +C    F +   L+ H+RT  G KPF C +C   F +    K H  +  ++ P
Sbjct: 1   MKPFQCRIC-MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI-QHILP 58

Query: 404 FKCDICFKLFTKKSNLRTHI---KTH 426
              D   +L +K  +L   +   K  
Sbjct: 59  ILEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 65.6 bits (161), Expect = 1e-13
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 373 VKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH--EPIP 430
           +KPF+C +C   F +   L  H+R      PF CDIC + F +    + H       PI 
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPIL 60

Query: 431 CDKCPEIFEKKTDLQEHV 448
            DK  E+  K   L+  V
Sbjct: 61  EDKVEELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 64.4 bits (158), Expect = 4e-13
 Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 14/99 (14%)

Query: 54  VKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRH 113
           +K F+C IC + ++R + LT H+RTH           GE  F C  C + F       RH
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHT----------GEKPFACDICGRKFARSDERKRH 50

Query: 114 LKSHSENKVFRCEQCRFDFYVK---REYNRHMKIHDGVK 149
                       ++                 +K   G +
Sbjct: 51  RDIQHI-LPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} Length = 312

 Score =  102 bits (257), Expect = 3e-24
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 9/127 (7%)

Query: 492 LVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLN 551
             + +  E    V+     ++A   AD+++T T ++ P+L  EW+ K  AHINAVGA   
Sbjct: 176 FADTVQGE----VRVCSSVQEAVAGADVIITVTLATEPILFGEWV-KPGAHINAVGASRP 230

Query: 552 HHSELDAAIYSHSSIFFDSEAAARGELKGLYEQVPANMVGEVGGLIAANLT-RDARYPLT 610
              ELD  +   + ++ DS+ AA  E  G      A +  E+G +I         +   T
Sbjct: 231 DWRELDDELMKEAVLYVDSQEAALKES-GDVLLSGAEIFAELGEVIKGVKPAHCEK--TT 287

Query: 611 VFHSMGV 617
           VF S+G+
Sbjct: 288 VFKSLGM 294

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 93.6 bits (234), Expect = 2e-23
 Identities = 34/81 (41%), Positives = 46/81 (56%)

Query: 179 FQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
           F C +C +SF + S L+ HL IH   RP+ C  C   F  KSD+ +H+ IH G KP  C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 239 MCAKCFSRKDDLNRHMKIHEG 259
           +C K FS+  +L  H + H G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 86.7 bits (216), Expect = 4e-21
 Identities = 28/79 (35%), Positives = 42/79 (53%)

Query: 153 CSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVC 212
           C +C K+F      + H+  H   +P+ C  C + F Q+S++  H  IH G +P +C VC
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 213 YICFTNKSDLNRHSRIHNG 231
              F+  S+L  HSR H G
Sbjct: 64  GKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 85.9 bits (214), Expect = 8e-21
 Identities = 31/78 (39%), Positives = 43/78 (55%)

Query: 237 CSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVC 296
           C +C K F R   L+ H+ IH  ++ Y C  C K F +K D+ +H   H G KP  C VC
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 297 FESFTQKALLNIHLRIHT 314
            ++F+Q + L  H R HT
Sbjct: 64  GKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 85.2 bits (212), Expect = 1e-20
 Identities = 30/81 (37%), Positives = 43/81 (53%)

Query: 207 FQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
           F C +C   F   S L+ H  IH+  +P+ C  C K F +K D+ +H  IH G K + C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 267 MCPKCFTRKDDLNRHMRNHDG 287
           +C K F++  +L  H R H G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 82.5 bits (205), Expect = 1e-19
 Identities = 30/75 (40%), Positives = 42/75 (56%)

Query: 263 YLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
           + C +C K F R   L+ H+  H   +P+ C  C + F QK+ +  H  IHT  KPH C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 323 ICTESFSQKSNLYIH 337
           +C ++FSQ SNL  H
Sbjct: 62  VCGKAFSQSSNLITH 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 73.6 bits (182), Expect = 2e-16
 Identities = 29/81 (35%), Positives = 39/81 (48%)

Query: 123 FRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
           F C+ C   F      + H+ IH   + + C  C K F  K    +H   H G KP +C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 183 VCSESFTQRSNLNIHLRIHDG 203
           VC ++F+Q SNL  H R H G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 56.3 bits (137), Expect = 2e-10
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)

Query: 347 FKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
           F C +C  ++F++ + LS H+      +P+ C  C + F +KS +K+H  +     P KC
Sbjct: 2   FDCKIC-GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 407 DICFKLFTKKSNLRTHIKTH 426
            +C K F++ SNL TH + H
Sbjct: 61  QVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 53.2 bits (129), Expect = 3e-09
 Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 10/91 (10%)

Query: 57  FKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKS 116
           F C IC K + R + L+ HL  H               + C  C K F  K  + +H   
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHS----------DTRPYPCQYCGKRFHQKSDMKKHTFI 51

Query: 117 HSENKVFRCEQCRFDFYVKREYNRHMKIHDG 147
           H+  K  +C+ C   F        H + H G
Sbjct: 52  HTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 53.2 bits (129), Expect = 3e-09
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 321 CSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSM 380
           C IC +SF + S L  HL +     P+ C  C  + F +++ +  H     G KP KC +
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYC-GKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 381 CDEGFPKKSVLKEHLRV 397
           C + F + S L  H R 
Sbjct: 63  CGKAFSQSSNLITHSRK 79

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 40.5 bits (96), Expect = 7e-05
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 10/63 (15%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           + + C  C KR+ +K+ +  H   H           GE    C  C K F    +L  H 
Sbjct: 28  RPYPCQYCGKRFHQKSDMKKHTFIHT----------GEKPHKCQVCGKAFSQSSNLITHS 77

Query: 115 KSH 117
           + H
Sbjct: 78  RKH 80

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 92.6 bits (231), Expect = 4e-23
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 166 FNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG----IRPFQCNVCYICFTNKSD 221
                R H G KP+ CS C ++F Q+  L++H + +         F C+ C   FT ++ 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 222 LNRHSRIHNGIKPFLCSMCAKCF 244
           + RH+    G             
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 92.2 bits (230), Expect = 5e-23
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 4/83 (4%)

Query: 222 LNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEG----SKRYLCTMCPKCFTRKDD 277
                R H G KP+ CS C K F +K  L+ H K +         ++C+ C K FTR++ 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 278 LNRHMRNHDGLKPFHCSVCFESF 300
           + RH  N  G           S 
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 91.8 bits (229), Expect = 8e-23
 Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 4/84 (4%)

Query: 193 NLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNG----IKPFLCSMCAKCFSRKD 248
           +     R H G +P+ C+ C   F  K  L+ H + ++        F+CS C K F+R++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 249 DLNRHMKIHEGSKRYLCTMCPKCF 272
            + RH     G             
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 84.5 bits (210), Expect = 3e-20
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 4/83 (4%)

Query: 250 LNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDG----LKPFHCSVCFESFTQKAL 305
                + H G K Y C+ C K F +K  L+ H + +         F CS C ++FT++  
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 306 LNIHLRIHTNSKPHACSICTESF 328
           +  H                 S 
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 81.4 bits (202), Expect = 3e-19
 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 139 NRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG----IKPFQCSVCSESFTQRSNL 194
               + H G K + CS C KTF  K   + H + +         F CS C ++FT+R+ +
Sbjct: 4   GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTM 63

Query: 195 NIHLRIHDGIRPFQCNVC 212
             H     G    +    
Sbjct: 64  ARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 78.3 bits (194), Expect = 5e-18
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 278 LNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHT----NSKPHACSICTESFSQKSN 333
                R H G KP+ CS C ++F QK LL++H + +           CS C ++F++++ 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 334 LYIHLKLQHGVNPFKCDVC 352
           +  H     G +  + +  
Sbjct: 63  MARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 63.3 bits (155), Expect = 8e-13
 Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 109 HLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDG----VKVFLCSVCSKTFTDKV 164
                 ++H+  K + C  C   F  K+  + H K +         F+CS C KTFT + 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 165 KFNRHMRAHEGIKPFQCSVCSESF 188
              RH     G    +      S 
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 60.2 bits (147), Expect = 9e-12
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 363 LSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRV----SHNVNPFKCDICFKLFTKKSN 418
                RT  G KP+ CS CD+ F +K +L  H +     +     F C  C K FT+++ 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 419 LRTHIKTH---EPIPCDKC 434
           +  H       + +  +  
Sbjct: 63  MARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 56.4 bits (137), Expect = 2e-10
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K + C+ C K + +K  L  H + +   +    +      F CS+C KTF  +  + RH 
Sbjct: 14  KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA------FVCSKCGKTFTRRNTMARHA 67

Query: 115 KSHSENKVFRCEQC 128
            + +       E  
Sbjct: 68  DNCAGPDGVEGENS 81

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A Length = 322

 Score = 96.9 bits (242), Expect = 3e-22
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 10/134 (7%)

Query: 490 KSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG 549
           K  V      G+ A        + A   D+LVT T S  PV+K EW+ ++  HINA+GA 
Sbjct: 164 KKFVSYCEDRGISAS---VQPAEEASRCDVLVTTTPSRKPVVKAEWV-EEGTHINAIGAD 219

Query: 550 LNHHSELDAAIYSHSSIFFDSEAAAR--GELKGLYEQ---VPANMVGEVGGLIAANLT-R 603
                ELD  I   + I  D    A+  GE+     +      ++   +G +IA     R
Sbjct: 220 GPGKQELDVEILKKAKIVVDDLEQAKHGGEINVAVSKGVIGVEDVHATIGEVIAGLKDGR 279

Query: 604 DARYPLTVFHSMGV 617
           ++   +T+F S G+
Sbjct: 280 ESDEEITIFDSTGL 293

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 88.7 bits (221), Expect = 8e-22
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 222 LNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIH--EGSKRYLCTMCPKCFTRKDDLN 279
                R H+G KP+ C +C   F++   +  H+     E   ++ C  C     RK DL 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 280 RHMRN-HDGLKPF 291
            H+R  H    P 
Sbjct: 63  VHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 86.8 bits (216), Expect = 4e-21
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 165 KFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG--IRPFQCNVCYICFTNKSDL 222
                 R H G KP++C +C   FTQ   + +H+       +  F C  C      KSDL
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 223 NRHSR-IHNGIKPF 235
             H R  H+   P 
Sbjct: 62  GVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 85.3 bits (212), Expect = 1e-20
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 278 LNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHT--NSKPHACSICTESFSQKSNLY 335
                R H G KP+ C +C   FTQ   + +H+      N     C  C    ++KS+L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 336 IHLKLQH 342
           +HL+ QH
Sbjct: 63  VHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 78.7 bits (195), Expect = 2e-18
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 139 NRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAH--EGIKPFQCSVCSESFTQRSNLNI 196
               + H G K + C +C   FT       H+     E +  F C  C     ++S+L +
Sbjct: 4   GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGV 63

Query: 197 HLR-IHDGIRPF 207
           HLR  H    P 
Sbjct: 64  HLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 73.3 bits (181), Expect = 2e-16
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 306 LNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVN--PFKCDVCPNETFEKETQL 363
                R H+  KP+ C IC   F+Q   + +H+  +H  N   F C  C +    +++ L
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHC-DTVIARKSDL 61

Query: 364 SLHMRTVH-GVKPF 376
            +H+R  H    P 
Sbjct: 62  GVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 66.8 bits (164), Expect = 3e-14
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 363 LSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSH--NVNPFKCDICFKLFTKKSNLR 420
                RT  G KP++C +C   F +   +K H+   H  NV  F C  C  +  +KS+L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 421 THIKTH 426
            H++  
Sbjct: 63  VHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 5/67 (7%)

Query: 391 LKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH-----EPIPCDKCPEIFEKKTDLQ 445
                R      P++C IC   FT+   ++ HI            C  C  +  +K+DL 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 446 EHVDKCH 452
            H+ K H
Sbjct: 63  VHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 12/65 (18%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGS--FTCSQCPKTFVDKWHLNR 112
           K ++C IC  R+ +   +  H+               E    F C  C      K  L  
Sbjct: 14  KPYECYICHARFTQSGTMKMHILQKH----------TENVAKFHCPHCDTVIARKSDLGV 63

Query: 113 HLKSH 117
           HL+  
Sbjct: 64  HLRKQ 68

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A* Length = 350

 Score = 95.9 bits (239), Expect = 1e-21
 Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 5/131 (3%)

Query: 490 KSLVEKLTSEGVPAVQAYEHGEDAARDADILVTAT--YSSVPVLKYEWLKKKDAHINAVG 547
             L+  L       ++      +A +  DI+ T T   +   ++  + L+    H+NAVG
Sbjct: 168 AKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAYATIITPDMLEP-GMHLNAVG 226

Query: 548 AGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQVPANMVGEVGGLIAANLT-RDAR 606
                 +EL A +  ++ +F + E   R E   + +      V ++  ++      R + 
Sbjct: 227 GDCPGKTELHADVLRNARVFVEYEPQTRIE-GEIQQLPADFPVVDLWRVLRGETEGRQSD 285

Query: 607 YPLTVFHSMGV 617
             +TVF S+G 
Sbjct: 286 SQVTVFDSVGF 296

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} Length = 313

 Score = 90.8 bits (226), Expect = 3e-20
 Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 10/143 (6%)

Query: 483 VRI--PVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKD 540
           + +  P     ++E++        +      D A  ADI+VTAT S+ P+   + L +  
Sbjct: 149 ILVHDPYASPEILERIGRRCGVPARMAA-PADIAAQADIVVTATRSTTPLFAGQAL-RAG 206

Query: 541 AHINAVGAGLNHHSELDAAIYSHSS-IFFDSEAAAR---GELKGLYEQ-VPANMVGEVGG 595
           A + A+G+ L H  ELD      +  +  +         G+L            V E+  
Sbjct: 207 AFVGAIGSSLPHTRELDDEALRRARAVVVEWREQTLSEAGDLVLAAPDTGLDAKVVELAD 266

Query: 596 LIAANLT-RDARYPLTVFHSMGV 617
           ++A     R A   + ++ S+GV
Sbjct: 267 VLAGRAAARQADEDIVIYKSVGV 289

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 84.1 bits (209), Expect = 3e-20
 Identities = 18/78 (23%), Positives = 27/78 (34%), Gaps = 5/78 (6%)

Query: 172 AHEGIKPFQCSV--CSESFTQRSNLNIHLRI-HDGIRPFQCN--VCYICFTNKSDLNRHS 226
              G     C    C   F+ R  LN H +  H   + F C    C   F  K  L  H 
Sbjct: 1   GSSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM 60

Query: 227 RIHNGIKPFLCSMCAKCF 244
           ++H+  + ++C       
Sbjct: 61  KLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 77.6 bits (192), Expect = 6e-18
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 5/77 (6%)

Query: 229 HNGIKPFLCSM--CAKCFSRKDDLNRHMKI-HEGSKRYLCT--MCPKCFTRKDDLNRHMR 283
            +G     C    C + FS +  LN H K  H   K + C    C K F  K  L  HM+
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 284 NHDGLKPFHCSVCFESF 300
            H   + + C     S 
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 76.4 bits (189), Expect = 2e-17
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 5/77 (6%)

Query: 201 HDGIRPFQCNV--CYICFTNKSDLNRHSRI-HNGIKPFLCS--MCAKCFSRKDDLNRHMK 255
             G     C+   C   F+N+  LN H +  H   K F C    C K F+ K  L  HMK
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 256 IHEGSKRYLCTMCPKCF 272
           +H  ++ Y+C       
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 71.8 bits (177), Expect = 7e-16
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 257 HEGSKRYLCTM--CPKCFTRKDDLNRHMR-NHDGLKPFHCS--VCFESFTQKALLNIHLR 311
             GS    C    C + F+ +  LN H +  H   K F C    C +SF  K  L  H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 312 IHTNSKPHACSICTESF 328
           +H++++ + C     S 
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 70.3 bits (173), Expect = 2e-15
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 145 HDGVKVFLCSV--CSKTFTDKVKFNRHMR-AHEGIKPFQCS--VCSESFTQRSNLNIHLR 199
             G     C    C + F+++   N H +  H   K F C    C +SF  + +L  H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 200 IHDGIRPFQCNVC 212
           +H   R + C   
Sbjct: 62  LHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 62.2 bits (152), Expect = 2e-12
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 285 HDGLKPFHCSV--CFESFTQKALLNIHLRI-HTNSKPHACS--ICTESFSQKSNLYIHLK 339
             G     C    C   F+ +  LN H +  H + K  +C    C +SF+ K +L  H+K
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 340 LQHGVNPFKCDVC 352
           L      + C+  
Sbjct: 62  LHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 58.3 bits (142), Expect = 3e-11
 Identities = 17/77 (22%), Positives = 25/77 (32%), Gaps = 4/77 (5%)

Query: 313 HTNSKPHACSI--CTESFSQKSNLYIHLKLQH-GVNPFKCDVCP-NETFEKETQLSLHMR 368
            + S    C    C   FS +  L  H K QH     F C      ++F  +  L  HM+
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 369 TVHGVKPFKCSMCDEGF 385
                + + C       
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 21/101 (20%), Positives = 30/101 (29%), Gaps = 29/101 (28%)

Query: 91  GEGSFTCS--QCPKTFVDKWHLNRHLK-SHSENKVFRCEQCRFDFYVKREYNRHMKIHDG 147
           G     C    C + F ++ +LN H K  H   K F C +                    
Sbjct: 4   GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPE-------------------- 43

Query: 148 VKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESF 188
                   C K+F  K     HM+ H   + + C     S 
Sbjct: 44  ------PACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 18/71 (25%), Positives = 24/71 (33%), Gaps = 8/71 (11%)

Query: 372 GVKPFKCSM--CDEGFPKKSVLKEHLRVSHN-VNPFKCD--ICFKLFTKKSNLRTHIKTH 426
           G     C    C   F  +  L  H +  H     F C    C K F  K +L+ H+K H
Sbjct: 4   GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH 63

Query: 427 ---EPIPCDKC 434
                  C+  
Sbjct: 64  SDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 15/79 (18%)

Query: 55  KKFKCNI--CPKRYARKNRLTNHLR-THEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWH 109
               C+   C + ++ +  L +H +  H            + SF+C +  C K+F  K H
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHI----------HQKSFSCPEPACGKSFNFKKH 55

Query: 110 LNRHLKSHSENKVFRCEQC 128
           L  H+K HS+ + + CE  
Sbjct: 56  LKEHMKLHSDTRDYICEFS 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 83.3 bits (207), Expect = 5e-20
 Identities = 25/69 (36%), Positives = 39/69 (56%)

Query: 167 NRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHS 226
           + H       KP++C  C  SF  + NL  H  +H G +P++CN+C   F   ++L  H+
Sbjct: 6   HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65

Query: 227 RIHNGIKPF 235
           RIH+G KP+
Sbjct: 66  RIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 83.3 bits (207), Expect = 5e-20
 Identities = 23/72 (31%), Positives = 38/72 (52%)

Query: 192 SNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLN 251
            + + H  +    +P++C+ C   F  K +L  H  +H G KP+ C++C   F+R  +L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 252 RHMKIHEGSKRY 263
            H +IH G K Y
Sbjct: 63  THTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 82.1 bits (204), Expect = 1e-19
 Identities = 25/72 (34%), Positives = 34/72 (47%)

Query: 220 SDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLN 279
              + HS + +  KP+ C  C   F  K +L  H  +H G K Y C +C   F R  +L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 280 RHMRNHDGLKPF 291
            H R H G KP+
Sbjct: 63  THTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 77.1 bits (191), Expect = 8e-18
 Identities = 24/70 (34%), Positives = 33/70 (47%)

Query: 250 LNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH 309
            + H  +    K Y C  C   F  K +L  H   H G KP+ C++C   F + A L  H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 310 LRIHTNSKPH 319
            RIH+  KP+
Sbjct: 65  TRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 72.9 bits (180), Expect = 2e-16
 Identities = 22/69 (31%), Positives = 34/69 (49%)

Query: 139 NRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHL 198
           + H  +    K + C  C  +F  K     H   H G KP++C++C   F + +NL  H 
Sbjct: 6   HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65

Query: 199 RIHDGIRPF 207
           RIH G +P+
Sbjct: 66  RIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 70.9 bits (175), Expect = 1e-15
 Identities = 21/60 (35%), Positives = 29/60 (48%)

Query: 278 LNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH 337
            + H       KP+ C  C  SF  K  L  H  +HT  KP+ C+IC   F++ +NL  H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 60.2 bits (147), Expect = 8e-12
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 306 LNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSL 365
            + H  +  + KP+ C  C  SF  K NL  H  +  G  P++C++C    F +   L  
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNIC-GAQFNRPANLKT 63

Query: 366 HMRTVHGVKPF 376
           H R   G KP+
Sbjct: 64  HTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 58.6 bits (143), Expect = 3e-11
 Identities = 22/64 (34%), Positives = 30/64 (46%)

Query: 363 LSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTH 422
              H    H  KP+KC  C   F  K  L  H  V     P++C+IC   F + +NL+TH
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 423 IKTH 426
            + H
Sbjct: 65  TRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 18/78 (23%), Positives = 27/78 (34%), Gaps = 10/78 (12%)

Query: 72  LTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFD 131
             +H                +  + C +C  +F  K +L  H   H+  K +RC  C   
Sbjct: 5   HHHHSHMTH----------SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQ 54

Query: 132 FYVKREYNRHMKIHDGVK 149
           F        H +IH G K
Sbjct: 55  FNRPANLKTHTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 10/63 (15%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K +KC+ C   +  K  L +H   H           GE  + C+ C   F    +L  H 
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHT----------GEKPYRCNICGAQFNRPANLKTHT 65

Query: 115 KSH 117
           + H
Sbjct: 66  RIH 68

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 83.3 bits (207), Expect = 7e-20
 Identities = 22/74 (29%), Positives = 35/74 (47%)

Query: 190 QRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDD 249
              +           R ++C+ C   F++ SDL++H R H G KP+ C  C K F ++  
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 250 LNRHMKIHEGSKRY 263
           L  H ++H GS   
Sbjct: 62  LIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 80.9 bits (201), Expect = 4e-19
 Identities = 22/68 (32%), Positives = 35/68 (51%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSR 227
           R        + ++C  C +SF+  S+L+ H R H G +P++C+ C   F  +S L  H R
Sbjct: 8   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR 67

Query: 228 IHNGIKPF 235
           +H G  P 
Sbjct: 68  VHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 78.6 bits (195), Expect = 3e-18
 Identities = 23/73 (31%), Positives = 30/73 (41%)

Query: 219 KSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDL 278
                R        + + C  C K FS   DL++H + H G K Y C  C K F ++  L
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 279 NRHMRNHDGLKPF 291
             H R H G  P 
Sbjct: 63  IGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 74.8 bits (185), Expect = 5e-17
 Identities = 26/71 (36%), Positives = 36/71 (50%)

Query: 249 DLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNI 308
              R        +RY C  C K F+   DL++H R H G KP+ C  C ++F Q++ L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 309 HLRIHTNSKPH 319
           H R+HT S P 
Sbjct: 65  HHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 70.2 bits (173), Expect = 2e-15
 Identities = 21/72 (29%), Positives = 34/72 (47%)

Query: 277 DLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYI 336
              R        + + C  C +SF+  + L+ H R HT  KP+ C  C ++F Q+S+L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 337 HLKLQHGVNPFK 348
           H ++  G  P  
Sbjct: 65  HHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 69.8 bits (172), Expect = 3e-15
 Identities = 23/68 (33%), Positives = 35/68 (51%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLR 199
           R        + + C  C K+F+     ++H R H G KP++C  C ++F QRS+L  H R
Sbjct: 8   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR 67

Query: 200 IHDGIRPF 207
           +H G  P 
Sbjct: 68  VHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.1 bits (147), Expect = 9e-12
 Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 302 QKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKET 361
                          + + C  C +SFS  S+L  H +   G  P+KCD C  + F + +
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDEC-GKAFIQRS 60

Query: 362 QLSLHMRTVHGVKPFK 377
            L  H R   G  P  
Sbjct: 61  HLIGHHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.9 bits (123), Expect = 2e-08
 Identities = 19/65 (29%), Positives = 28/65 (43%)

Query: 362 QLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRT 421
                       + +KC  C + F   S L +H R      P+KCD C K F ++S+L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 422 HIKTH 426
           H + H
Sbjct: 65  HHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.9 bits (97), Expect = 5e-05
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 10/63 (15%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           +++KC+ C K ++  + L+ H RTH           GE  + C +C K F+ + HL  H 
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHT----------GEKPYKCDECGKAFIQRSHLIGHH 66

Query: 115 KSH 117
           + H
Sbjct: 67  RVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.1 bits (95), Expect = 9e-05
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 387 KKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKKTD 443
                            +KCD C K F+  S+L  H +TH   +P  CD+C + F +++ 
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 444 LQEH 447
           L  H
Sbjct: 62  LIGH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 80.6 bits (200), Expect = 4e-19
 Identities = 23/68 (33%), Positives = 33/68 (48%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSR 227
                H G KP+ C  C ++F++ S L  H R+H G +P++C  C   F+  S L  H R
Sbjct: 4   GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63

Query: 228 IHNGIKPF 235
           IH      
Sbjct: 64  IHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 78.7 bits (195), Expect = 2e-18
 Identities = 26/70 (37%), Positives = 34/70 (48%)

Query: 222 LNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRH 281
            +  S IH+G KP+ C  C K FSR   L +H ++H G K Y C  C K F++   L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 282 MRNHDGLKPF 291
            R H      
Sbjct: 62  QRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 77.9 bits (193), Expect = 4e-18
 Identities = 27/71 (38%), Positives = 36/71 (50%)

Query: 250 LNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH 309
            +    IH G K Y C  C K F+R   L +H R H G KP+ C  C ++F+Q + L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 310 LRIHTNSKPHA 320
            RIHT+     
Sbjct: 62  QRIHTSGPSSG 72

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 77.5 bits (192), Expect = 5e-18
 Identities = 24/70 (34%), Positives = 33/70 (47%)

Query: 194 LNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRH 253
            +    IH G +P+ C  C   F+  S L +H R+H G KP+ C  C K FS+   L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 254 MKIHEGSKRY 263
            +IH      
Sbjct: 62  QRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 72.5 bits (179), Expect = 3e-16
 Identities = 24/68 (35%), Positives = 32/68 (47%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLR 199
               IH G K + C  C K F+      +H R H G KP++C  C ++F+Q S L  H R
Sbjct: 4   GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63

Query: 200 IHDGIRPF 207
           IH      
Sbjct: 64  IHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 69.0 bits (170), Expect = 6e-15
 Identities = 22/70 (31%), Positives = 36/70 (51%)

Query: 278 LNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH 337
            +     H G KP+ C  C ++F++ ++L  H R+HT  KP+ C  C ++FSQ S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 338 LKLQHGVNPF 347
            ++       
Sbjct: 62  QRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 55.9 bits (136), Expect = 2e-10
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 306 LNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSL 365
            +    IH+  KP+ C  C ++FS+ S L  H ++  G  P+KC  C  + F + + L  
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLEC-GKAFSQNSGLIN 60

Query: 366 HMRTVHGVKPF 376
           H R        
Sbjct: 61  HQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 50.9 bits (123), Expect = 1e-08
 Identities = 22/64 (34%), Positives = 31/64 (48%)

Query: 363 LSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTH 422
            S       G KP+ C  C + F + S+L +H RV     P+KC  C K F++ S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 423 IKTH 426
            + H
Sbjct: 62  QRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 43.6 bits (104), Expect = 5e-06
 Identities = 19/108 (17%), Positives = 27/108 (25%), Gaps = 38/108 (35%)

Query: 72  LTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFD 131
            +     H           GE  + C +C K F     L                     
Sbjct: 2   SSGSSGIHS----------GEKPYGCVECGKAFSRSSIL--------------------- 30

Query: 132 FYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPF 179
                   +H ++H G K + C  C K F+       H R H      
Sbjct: 31  -------VQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 41.3 bits (98), Expect = 3e-05
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 10/67 (14%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K + C  C K ++R + L  H R H           GE  + C +C K F     L  H 
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHT----------GEKPYKCLECGKAFSQNSGLINHQ 62

Query: 115 KSHSENK 121
           + H+   
Sbjct: 63  RIHTSGP 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 80.6 bits (200), Expect = 4e-19
 Identities = 23/68 (33%), Positives = 34/68 (50%)

Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHN 230
            +     P +CS CS S + ++ L IH RIH   RPF+CN C       S+L++H +  +
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 231 GIKPFLCS 238
           G      S
Sbjct: 62  GDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 76.8 bits (190), Expect = 9e-18
 Identities = 17/68 (25%), Positives = 27/68 (39%)

Query: 227 RIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHD 286
              +   P  CS C+   S K  L  H +IH   + + C  C     +  +L++HM+   
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 287 GLKPFHCS 294
           G      S
Sbjct: 62  GDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 75.6 bits (187), Expect = 3e-17
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHE 258
                  P +C+ C    ++K+ L  H RIH   +PF C+ C+    +  +L++HMK   
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 259 GSKRY 263
           G    
Sbjct: 62  GDMSG 66

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 72.9 bits (180), Expect = 2e-16
 Identities = 15/66 (22%), Positives = 23/66 (34%)

Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNS 316
                   C+ C    + K  L  H R H   +PF C+ C     Q + L+ H++     
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63

Query: 317 KPHACS 322
                S
Sbjct: 64  MSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 72.5 bits (179), Expect = 3e-16
 Identities = 19/59 (32%), Positives = 27/59 (45%)

Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG 203
                   CS CS + + K     H R H   +PF+C+ CS    Q SNL+ H++   G
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 71.0 bits (175), Expect = 1e-15
 Identities = 24/61 (39%), Positives = 30/61 (49%)

Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQH 342
            +     P  CS C  S + KA L IH RIH   +P  C+ C+    Q SNL  H+K  H
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 343 G 343
           G
Sbjct: 62  G 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 372 GVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH 426
              P KCS C      K+ L+ H R+     PFKC+ C     + SNL  H+K  
Sbjct: 6   SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.7 bits (138), Expect = 1e-10
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTV 370
              ++  P  CS C+ S S K+ L IH ++     PFKC+ C +   ++ + LS HM+  
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYC-SFDTKQPSNLSKHMKKF 60

Query: 371 HGVKPFKCS 379
           HG      S
Sbjct: 61  HGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 55.2 bits (134), Expect = 4e-10
 Identities = 16/67 (23%), Positives = 25/67 (37%)

Query: 116 SHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG 175
           S S     +C +C +    K     H +IH   + F C+ CS         ++HM+   G
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

Query: 176 IKPFQCS 182
                 S
Sbjct: 63  DMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 10/63 (15%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
              KC+ C    + K  L  H R H            +  F C+ C        +L++H+
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHC----------TDRPFKCNYCSFDTKQPSNLSKHM 57

Query: 115 KSH 117
           K  
Sbjct: 58  KKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 52.1 bits (126), Expect = 5e-09
 Identities = 16/59 (27%), Positives = 24/59 (40%)

Query: 91  GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVK 149
                 CS+C  +   K  L  H + H  ++ F+C  C FD       ++HMK   G  
Sbjct: 6   SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEH 447
           P KC  C    + K+ LR H + H    P  C+ C    ++ ++L +H
Sbjct: 9   PEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH 56

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 79.1 bits (196), Expect = 1e-18
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRI--HNGIKPFLCSMCAKCFSRKDDLNRHMKI 256
              +G   ++C VC   +T+ S+  RH        +K + C  C K F+RKD++  H+KI
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 257 HEG 259
              
Sbjct: 63  IHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 79.1 bits (196), Expect = 1e-18
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRI--HDGIRPFQCNVCYICFTNKSDLNRHSRI 228
              EG   ++C VCS  +T  SN   H        ++ + C  C+  FT K ++  H +I
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 229 HNGI 232
            + I
Sbjct: 63  IHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 76.8 bits (190), Expect = 8e-18
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 227 RIHNGIKPFLCSMCAKCFSRKDDLNRHMKI--HEGSKRYLCTMCPKCFTRKDDLNRHMRN 284
               G   + C +C++ ++   +  RH         K Y C  C K FTRKD++  H++ 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 285 HDGL 288
              +
Sbjct: 63  IHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 75.3 bits (186), Expect = 3e-17
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 144 IHDGVKVFLCSVCSKTFTDKVKFNRHMR--AHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
             +G   + C VCS+ +T    F RH        +K + C  C + FT++ N+  H++I 
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 202 DGI 204
             I
Sbjct: 64  HKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 69.5 bits (171), Expect = 3e-15
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIHLRI--HTNSKPHACSICTESFSQKSNLYIHLKL 340
              +G   + C VC   +T  +    H       N K + C  C + F++K N+  H+K+
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 341 QHGV 344
            H +
Sbjct: 63  IHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 65.7 bits (161), Expect = 7e-14
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 368 RTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVN--PFKCDICFKLFTKKSNLRTHIKT 425
            T  G   ++C +C   +   S    H   SH  N   + C  CFK FT+K N+  H+K 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 426 HEPI 429
              I
Sbjct: 63  IHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 60.3 bits (147), Expect = 6e-12
 Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQH--GVNPFKCDVCPNETFEKETQLSLHMR 368
                   + C +C+  ++  SN   H    H   V  + C  C  + F ++  ++ H++
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFC-FKEFTRKDNMTAHVK 61

Query: 369 TVHGV 373
            +H +
Sbjct: 62  IIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 49.5 bits (119), Expect = 4e-08
 Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 12/74 (16%)

Query: 77  RTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKS--HSENKVFRCEQCRFDFYV 134
            T E          GE ++ C  C + +    +  RH  +      KV+ C  C  +F  
Sbjct: 3   FTKE----------GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTR 52

Query: 135 KREYNRHMKIHDGV 148
           K     H+KI   +
Sbjct: 53  KDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 48.7 bits (117), Expect = 7e-08
 Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 8/63 (12%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
             ++C +C + Y   +    H  T                + C  C K F  K ++  H+
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKR--------NVKVYPCPFCFKEFTRKDNMTAHV 60

Query: 115 KSH 117
           K  
Sbjct: 61  KII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.7 bits (104), Expect = 4e-06
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 5/50 (10%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTHE-----PIPCDKCPEIFEKKTDLQEH 447
            ++C +C +++T  SN   H  T         PC  C + F +K ++  H
Sbjct: 10  TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAH 59

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 77.7 bits (192), Expect = 5e-18
 Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 223 NRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNR 280
           N  + +   ++P+ C +  C + FSR D+L RH++IH G K + C +C + F+R D L  
Sbjct: 8   NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67

Query: 281 HMRNH 285
           H+R H
Sbjct: 68  HIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 72.0 bits (177), Expect = 5e-16
 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 192 SNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDD 249
           +NL  ++      RP+ C V  C   F+   +L RH RIH G KPF C +C + FSR D 
Sbjct: 7   NNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64

Query: 250 LNRHMKIH 257
           L  H++ H
Sbjct: 65  LTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 68.9 bits (169), Expect = 7e-15
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)

Query: 244 FSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFT 301
               ++L  ++      + Y C +  C + F+R D+L RH+R H G KPF C +C  +F+
Sbjct: 3   PHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

Query: 302 QKALLNIHLRIHT 314
           +   L  H+R HT
Sbjct: 61  RSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 61.6 bits (150), Expect = 2e-12
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 139 NRHMKIHDGVKVFLCSV--CSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNI 196
           N    +   ++ + C V  C + F+   +  RH+R H G KPFQC +C  +F++  +L  
Sbjct: 8   NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67

Query: 197 HLRIH 201
           H+R H
Sbjct: 68  HIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 167 NRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNR 224
             ++      +P+ C V  C   F++   L  H+RIH G +PFQC +C   F+    L  
Sbjct: 10  LNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67

Query: 225 HSRIH 229
           H R H
Sbjct: 68  HIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 54.6 bits (132), Expect = 6e-10
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 272 FTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFS 329
               ++L  ++      +P+ C V  C   F++   L  H+RIHT  KP  C IC  +FS
Sbjct: 3   PHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

Query: 330 QKSNLYIHLK 339
           +  +L  H++
Sbjct: 61  RSDHLTTHIR 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 52.7 bits (127), Expect = 3e-09
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)

Query: 359 KETQLSLHMRTVHGVKPFKCSM--CDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKK 416
               L  ++     ++P+ C +  CD  F +   L  H+R+     PF+C IC + F++ 
Sbjct: 5   PMNNLLNYVVP--KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRS 62

Query: 417 SNLRTHIKTH 426
            +L THI+TH
Sbjct: 63  DHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 12/66 (18%)

Query: 55  KKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNR 112
           + + C +  C +R++R + LT H+R H           G+  F C  C + F    HL  
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHT----------GQKPFQCRICMRNFSRSDHLTT 67

Query: 113 HLKSHS 118
           H+++H+
Sbjct: 68  HIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 109 HLNRHLKSHSENKVFRC--EQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKF 166
           +L  ++      + + C  E C   F    E  RH++IH G K F C +C + F+     
Sbjct: 8   NLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHL 65

Query: 167 NRHMRAH 173
             H+R H
Sbjct: 66  TTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 43.8 bits (104), Expect = 4e-06
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 307 NIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLS 364
           N+   +    +P+AC +  C   FS+   L  H+++  G  PF+C +C    F +   L+
Sbjct: 8   NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRIC-MRNFSRSDHLT 66

Query: 365 LHMRT 369
            H+RT
Sbjct: 67  THIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.0 bits (94), Expect = 9e-05
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 14/80 (17%)

Query: 68  RKNRLTNHLRTHEAGSGDEKSEGGEGSFTCS--QCPKTFVDKWHLNRHLKSHSENKVFRC 125
             N L N++                  + C    C + F     L RH++ H+  K F+C
Sbjct: 5   PMNNLLNYVVPKMR------------PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC 52

Query: 126 EQCRFDFYVKREYNRHMKIH 145
             C  +F        H++ H
Sbjct: 53  RICMRNFSRSDHLTTHIRTH 72

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 78.0 bits (193), Expect = 6e-18
 Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 2/70 (2%)

Query: 216 FTNKSDLNRHSRIHNGIKPFLCS--MCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFT 273
           F   + L  H   H    P+ C    C K FS    L RH K+H G        C     
Sbjct: 13  FKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGK 72

Query: 274 RKDDLNRHMR 283
                 +H+ 
Sbjct: 73  TWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 68.4 bits (168), Expect = 1e-14
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 150 VFLCSV--CSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIR 205
           +++C    C K F    +   H  +H    P++C    C + F+  S L  H ++H G  
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 206 PFQCNVCYICFTNKSDLNRH-SRIH 229
             + + C       +   +H +  H
Sbjct: 61  CKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 65.7 bits (161), Expect = 1e-13
 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 7/79 (8%)

Query: 240 CAKCFSRKDDLNRHMKIHEGSKRYLCT--MCPKCFTRKDDLNRHMRNHDGL---KPFHCS 294
           C K F + + L  H   H     Y C    C K F+    L RH + H G    K   CS
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 295 VCFESFTQKALLNIHLRIH 313
              +++T    L      H
Sbjct: 69  FVGKTWTL--YLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 63.0 bits (154), Expect = 1e-12
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 4/84 (4%)

Query: 263 YLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKP 318
           Y+C    C K F + + L  H  +H    P+ C    C + F+  + L  H ++H     
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 319 HACSICTESFSQKSNLYIHLKLQH 342
                C+      +    H+   H
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 20/113 (17%), Positives = 32/113 (28%), Gaps = 33/113 (29%)

Query: 291 FHCSV--CFESFTQKALLNIHLRIHTNSKPHACS--ICTESFSQKSNLYIHLKLQHGVNP 346
           + C    C ++F +   L +H   HT   P+ C    C + FS  S L            
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRL------------ 49

Query: 347 FKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSH 399
                              H +   G    K   C       ++  +H+   H
Sbjct: 50  -----------------KRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 49.5 bits (119), Expect = 6e-08
 Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 14/91 (15%)

Query: 57  FKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWHLNR 112
           + C+   C K + + N+L  H  +H            +  + C    C K F     L R
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHT----------QQLPYECPHEGCDKRFSLPSRLKR 51

Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMK 143
           H K H+     + + C F       Y +H+ 
Sbjct: 52  HEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 49.5 bits (119), Expect = 6e-08
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 347 FKCDV--CPNETFEKETQLSLHMRTVHGVKPFKCS--MCDEGFPKKSVLKEHLRVSHNVN 402
           + C    C  + F+K  QL +H  +     P++C    CD+ F   S LK H +V     
Sbjct: 2   YVCHFENC-GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 403 PFKCDICFKLFTKKSNLRTHIK-TH 426
             K D C  +    +    H+   H
Sbjct: 61  CKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 49.2 bits (118), Expect = 7e-08
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 7/84 (8%)

Query: 376 FKCSM--CDEGFPKKSVLKEHLRVSHNVNPFKCD--ICFKLFTKKSNLRTHIKTHE---P 428
           + C    C + F K + LK H        P++C    C K F+  S L+ H K H     
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 429 IPCDKCPEIFEKKTDLQEHVDKCH 452
              D C  + +  T   +HV +CH
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 7/83 (8%)

Query: 96  TCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ--CRFDFYVKREYNRHMKIHDGVKVFLC 153
               C K F     L  H  SH++   + C    C   F +     RH K+H G      
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 154 SVCS---KTFTDKVKFNRHMRAH 173
             CS   KT+T  +K       H
Sbjct: 65  DSCSFVGKTWTLYLK--HVAECH 85

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 77.8 bits (192), Expect = 6e-18
 Identities = 17/98 (17%), Positives = 25/98 (25%), Gaps = 25/98 (25%)

Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGI 232
             G    QC +C  +  Q+++LN H R H                               
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETV-------------------------AA 36

Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPK 270
             F C  C K F + D +  H      +          
Sbjct: 37  LRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 75.1 bits (185), Expect = 5e-17
 Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 3/71 (4%)

Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIH---EGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
            +G     C +C     +K  LN H + H     + R+ C  C K F + D +  H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 286 DGLKPFHCSVC 296
                      
Sbjct: 62  HPALLLAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 72.8 bits (179), Expect = 3e-16
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 3/72 (4%)

Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNS---KPHACSICTESFSQKSNLYIHLKLQ 341
             G     C +C  +  QKA LN H R H  +       C  C + F +  ++  H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 342 HGVNPFKCDVCP 353
           H           
Sbjct: 62  HPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 67.0 bits (164), Expect = 3e-14
 Identities = 16/68 (23%), Positives = 22/68 (32%), Gaps = 3/68 (4%)

Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNH---DGLKPFHCSVCFESFTQKALLNIHLRIH 313
             GS    C +C     +K  LN H R H        F C  C + F +   +  H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 314 TNSKPHAC 321
             +   A 
Sbjct: 62  HPALLLAP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 64.3 bits (157), Expect = 3e-13
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 313 HTNSKPHACSICTESFSQKSNLYIHLK---LQHGVNPFKCDVCPNETFEKETQLSLHMRT 369
            + S    C IC  +  QK++L  H +          F C+ C  + FEK   ++ H   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFC-GKRFEKPDSVAAHRSK 60

Query: 370 VHGVKPFKCSMC 381
            H          
Sbjct: 61  SHPALLLAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 64.0 bits (156), Expect = 3e-13
 Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 3/68 (4%)

Query: 372 GVKPFKCSMCDEGFPKKSVLKEHLRV---SHNVNPFKCDICFKLFTKKSNLRTHIKTHEP 428
           G    +C +C     +K+ L  H R    +     F C+ C K F K  ++  H     P
Sbjct: 4   GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP 63

Query: 429 IPCDKCPE 436
                  E
Sbjct: 64  ALLLAPQE 71

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 62.4 bits (152), Expect = 1e-12
 Identities = 14/74 (18%), Positives = 20/74 (27%), Gaps = 7/74 (9%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
              +C IC     +K  L  H R H               F C  C K F     +  H 
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKH-------AETVAALRFPCEFCGKRFEKPDSVAAHR 58

Query: 115 KSHSENKVFRCEQC 128
                  +   ++ 
Sbjct: 59  SKSHPALLLAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 57.4 bits (139), Expect = 8e-11
 Identities = 16/72 (22%), Positives = 19/72 (26%), Gaps = 3/72 (4%)

Query: 117 HSENKVFRCEQCRFDFYVKREYNRHMKIH---DGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
            S +   +CE C F    K   N H + H        F C  C K F        H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 174 EGIKPFQCSVCS 185
                      S
Sbjct: 62  HPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 52.8 bits (127), Expect = 4e-09
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 6/56 (10%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTH------EPIPCDKCPEIFEKKTDLQEHVDKCH 452
             +C+IC     +K++L  H + H         PC+ C + FEK   +  H  K H
Sbjct: 7   GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 72.9 bits (178), Expect = 9e-16
 Identities = 20/97 (20%), Positives = 29/97 (29%), Gaps = 5/97 (5%)

Query: 220 SDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKI-----HEGSKRYLCTMCPKCFTR 274
           S    +  I  G   F C  C+  +    +L  HM        +  +            R
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 275 KDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLR 311
           K  L       D  K   C  C  SF     L++H+ 
Sbjct: 65  KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 72.5 bits (177), Expect = 1e-15
 Identities = 19/92 (20%), Positives = 27/92 (29%), Gaps = 5/92 (5%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRI-----HDGIRPFQCNVCYICFTNKSDLN 223
           +     G   F+C  CS ++     L +H+        D       N        K  L 
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMK 255
                 +  K   C  C   F    DL+ HM 
Sbjct: 70  EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 72.1 bits (176), Expect = 1e-15
 Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 5/102 (4%)

Query: 189 TQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRI-----HNGIKPFLCSMCAKC 243
           +  S+  ++  I  G   F+C  C   +    +L  H         +  +    +     
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 244 FSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
             RK  L       +  K   C  C   F    DL+ HM   
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 69.8 bits (170), Expect = 1e-14
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 6/108 (5%)

Query: 245 SRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMR-----NHDGLKPFHCSVCFES 299
           S       +  I  G+ ++ C  C   +    +L  HM        D  +  + +    S
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 300 FTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHL-KLQHGVNP 346
             +K  L          K   C  C  SF    +L +H+ K +H    
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV 109

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 59.4 bits (143), Expect = 5e-11
 Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 5/96 (5%)

Query: 109 HLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKI-----HDGVKVFLCSVCSKTFTDK 163
               +    +    FRC+ C   +    E   HM        D  +    +    +   K
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 164 VKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLR 199
                     +  K  +C  C  SF    +L++H+ 
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 56.7 bits (136), Expect = 4e-10
 Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 6/105 (5%)

Query: 329 SQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVH-----GVKPFKCSMCDE 383
           S  S+  ++  +  G + F+C  C +  ++   +L++HM           +    +    
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDC-SAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW 60

Query: 384 GFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEP 428
             P+K  L E           KC  C   F    +L  H+   + 
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 52.8 bits (126), Expect = 8e-09
 Identities = 17/88 (19%), Positives = 24/88 (27%), Gaps = 5/88 (5%)

Query: 91  GEGSFTCSQCPKTFVDKWHLNRHLKS--HSENKVFRCEQCRFDFY---VKREYNRHMKIH 145
           G   F C  C   +     L  H+    H  +     +      +    KR         
Sbjct: 16  GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE 75

Query: 146 DGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
           D  KV  C  C  +F      + HM   
Sbjct: 76  DAQKVLKCMYCGHSFESLQDLSVHMIKT 103

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 50.1 bits (119), Expect = 7e-08
 Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 8/100 (8%)

Query: 361 TQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSH-----NVNPFKCDICFKLFTK 415
           +   L+     G   F+C  C   +     L  H+  +      N      +       +
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 416 KSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVDKCH 452
           K +L          + + C  C   FE   DL  H+ K  
Sbjct: 65  KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 49.4 bits (117), Expect = 2e-07
 Identities = 17/89 (19%), Positives = 27/89 (30%), Gaps = 5/89 (5%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
            KF+C  C   Y     LT H+            +    +   +    +   K  L    
Sbjct: 18  SKFRCKDCSAAYDTLVELTVHMNETG-----HYRDDNHETDNNNPKRWSKPRKRSLLEME 72

Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMK 143
                 KV +C  C   F   ++ + HM 
Sbjct: 73  GKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 70.2 bits (173), Expect = 2e-15
 Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 205 RPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHM-KIHEG 259
           R F C VC   F  +  L RH R H   KP+ C +C + F+R+D L RH  KIH G
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 69.4 bits (171), Expect = 3e-15
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHS-RIHNG 231
           + F C VC+ +F ++ +L  H R H   +P+ C +C   FT +  L RH+ +IH+G
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 67.1 bits (165), Expect = 2e-14
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHM-RNHDG 287
           + F+C +C + F+R++ L RH + H   K Y C +C + FTR+D L RH  + H G
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 64.0 bits (157), Expect = 3e-13
 Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHL-RIHT 314
           + ++C +C + F R++ L RH R+H   KP+ C +C  +FT++ LL  H  +IH+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 63.3 bits (155), Expect = 5e-13
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQH 342
           + F C VC  +F ++  L  H R HTN KP+ C +C  +F+++  L  H +  H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 60.6 bits (148), Expect = 4e-12
 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 149 KVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHL-RIHDG 203
           + F+C VC++ F  +    RH R+H   KP+ C +C+ +FT+R  L  H  +IH G
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 48.3 bits (116), Expect = 7e-08
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 374 KPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHI-KTH 426
           + F C +C   F ++  LK H R   N  P+ C +C + FT++  L  H  K H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 43.2 bits (103), Expect = 5e-06
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 10/61 (16%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           + F C +C + +AR+  L  H R+H            E  + C  C + F  +  L RH 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHT----------NEKPYPCGLCNRAFTRRDLLIRHA 50

Query: 115 K 115
           +
Sbjct: 51  Q 51

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 346 PFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSH 399
            F C+VC    F ++  L  H R+    KP+ C +C+  F ++ +L  H +  H
Sbjct: 2   SFVCEVC-TRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.8 bits (94), Expect = 7e-05
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKKTDLQEHVDKCH 452
            F C++C + F ++ +L+ H ++H   +P PC  C   F ++  L  H  K H
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 95  FTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHM-KIHDG 147
           F C  C + F  + HL RH +SH+  K + C  C   F  +    RH  KIH G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 65.1 bits (159), Expect = 1e-13
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 219 KSDLNRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTR 274
            S  +      + I+  +CS   C K + +   L  H + H G K + C+   C + F R
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 275 KDDLNRHMRNH 285
            D+L+RH R H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 64.3 bits (157), Expect = 2e-13
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 191 RSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSR 246
            S  +        IR   C+   C   +   S L  H+R H G KPF CS   C + F+R
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 247 KDDLNRHMKIH 257
            D+L+RH + H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 63.2 bits (154), Expect = 7e-13
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)

Query: 167 NRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDL 222
           +        I+   CS   C +++ + S+L  H R H G +PF C+   C   F    +L
Sbjct: 6   SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDEL 65

Query: 223 NRHSRIH 229
           +RH R H
Sbjct: 66  SRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 53.2 bits (128), Expect = 2e-09
 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 135 KREYNRHMKIHDGVKVFLCSV--CSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQ 190
               +        ++  +CS   C KT+        H R H G KPF CS   C   F +
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 191 RSNLNIHLRIH 201
              L+ H R H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 52.4 bits (126), Expect = 3e-09
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 250 LNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKAL 305
            +         + ++C+   C K + +   L  H R H G KPF CS   C   F +   
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64

Query: 306 LNIHLRIH 313
           L+ H R H
Sbjct: 65  LSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 50.5 bits (121), Expect = 2e-08
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 278 LNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSN 333
            +    +   ++   CS   C +++ + + L  H R HT  KP +CS   C   F++   
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64

Query: 334 LYIHLK 339
           L  H +
Sbjct: 65  LSRHRR 70

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 43.1 bits (102), Expect = 6e-06
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 361 TQLSLHMRTVHGVKPFKCSM--CDEGFPKKSVLKEHLRVSHNVNPFKCDI--CFKLFTKK 416
           +  S        ++   CS   C + + K S LK H R      PF C    C + F + 
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 417 SNLRTHIKTH 426
             L  H +TH
Sbjct: 63  DELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 14/67 (20%)

Query: 55  KKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWHL 110
           +   C+   C K Y + + L  H RTH           GE  F+CS   C + F     L
Sbjct: 16  RSHICSHPGCGKTYFKSSHLKAHTRTHT----------GEKPFSCSWKGCERRFARSDEL 65

Query: 111 NRHLKSH 117
           +RH ++H
Sbjct: 66  SRHRRTH 72

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 6e-12
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++CS C ++FT++S L+IH + H G R    +
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 9e-11
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ CS C ++FT+K+ L+IH + HT  +    S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 4e-10
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ CS C K F+RK  L+ H + H G +    +
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 6e-10
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C+ C   FT KS L+ H + H G +    S
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C+ C K FTRK  L+ H ++H G +    S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ CS C ++F++KS L+IH +   G      
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + CS C K FT K   + H ++H G +    S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 6e-12
 Identities = 16/43 (37%), Positives = 28/43 (65%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++CS+C +SFT++S L++H +IH G +P   +
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 18/43 (41%), Positives = 27/43 (62%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ CS+C +SFT+K+ L++H +IHT  KP   S
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ CS+C K F++K  L+ H +IH G K    +
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                  G +P++C++C   FT KS L+ H +IH G KP   S
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 5e-08
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                 T  KP+ CSIC +SF++KS L++H ++  G  P   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C++C K FT+K  L+ H + H G KP   S
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + CS+C K+FT K + + H + H G KP   S
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 61.1 bits (148), Expect = 6e-12
 Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 9/76 (11%)

Query: 256 IHEGSKRYLCTMCPKCFTRKDDLNRHMRN-HDGLKPFH--------CSVCFESFTQKALL 306
           I E         C + F+   +L  H+   H G    +        C    +SF  K  L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 307 NIHLRIHTNSKPHACS 322
             H+R+HT  K    S
Sbjct: 79  VNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 56.1 bits (135), Expect = 4e-10
 Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 9/75 (12%)

Query: 144 IHDGVKVFLCSVCSKTFTDKVKFNRHM-RAHEGIKPFQ--------CSVCSESFTQRSNL 194
           I +         C +TF+   +   H+   H G             C    +SF  +  L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 195 NIHLRIHDGIRPFQC 209
             H+R+H G +    
Sbjct: 79  VNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 55.0 bits (132), Expect = 9e-10
 Identities = 19/75 (25%), Positives = 24/75 (32%), Gaps = 9/75 (12%)

Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHL-RIHDGIRPFQCNVCY--------ICFTNKSDLN 223
            E         C  +F+    L  H+   H G      +VCY          F  K  L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 224 RHSRIHNGIKPFLCS 238
            H R+H G K    S
Sbjct: 80  NHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 53.0 bits (127), Expect = 4e-09
 Identities = 16/76 (21%), Positives = 24/76 (31%), Gaps = 9/76 (11%)

Query: 200 IHDGIRPFQCNVCYICFTNKSDLNRH-SRIHNGIKPF--------LCSMCAKCFSRKDDL 250
           I +         C   F+   +L  H +  H G             C    K F  K  L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 251 NRHMKIHEGSKRYLCT 266
             H+++H G K    +
Sbjct: 79  VNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 51.1 bits (122), Expect = 2e-08
 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 8/76 (10%)

Query: 312 IHTNSKPHACSICTESFSQKSNLYIHLKLQH-GVNPFKCDVC-------PNETFEKETQL 363
           I           C  +FS    L  H+ ++H G       VC         ++F+ + +L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 364 SLHMRTVHGVKPFKCS 379
             H+R   G K    S
Sbjct: 79  VNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 50.0 bits (119), Expect = 5e-08
 Identities = 19/95 (20%), Positives = 27/95 (28%), Gaps = 21/95 (22%)

Query: 89  EGGEGSFTCSQCPKTFVDKWHLNRHL-KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDG 147
           +  + S     C +TF     L  H+   H          C ++                
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE---------------- 63

Query: 148 VKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                C    K+F  K K   H+R H G K    S
Sbjct: 64  ----ECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 44.2 bits (104), Expect = 6e-06
 Identities = 12/75 (16%), Positives = 20/75 (26%), Gaps = 9/75 (12%)

Query: 284 NHDGLKPFHCSVCFESFTQKALLNIHL-RIHTNSKPHA--------CSICTESFSQKSNL 334
             +         C  +F+    L  H+   H               C    +SF  K  L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 335 YIHLKLQHGVNPFKC 349
             H+++  G      
Sbjct: 79  VNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 15/65 (23%), Positives = 19/65 (29%), Gaps = 9/65 (13%)

Query: 371 HGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFK---------CDICFKLFTKKSNLRT 421
                     CD  F     L  H+ + H   P +         C    K F  K  L  
Sbjct: 21  EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 422 HIKTH 426
           HI+ H
Sbjct: 81  HIRVH 85

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.1 bits (96), Expect = 7e-05
 Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 1/71 (1%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
                  C + ++  + L  H+     G  ++ +        C +  K+F  K+ L  H+
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY-WEECPREGKSFKAKYKLVNHI 82

Query: 115 KSHSENKVFRC 125
           + H+  K    
Sbjct: 83  RVHTGEKSGPS 93

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 66.8 bits (162), Expect = 1e-11
 Identities = 88/599 (14%), Positives = 165/599 (27%), Gaps = 172/599 (28%)

Query: 5   SMMGKYVDANEEESKDIEKLVIEESASEDSDDEEDEDFENDENSSGKKMVKKF-KCNICP 63
            M+ K+V+  E    + + L+     +E            ++        + F K N+  
Sbjct: 77  EMVQKFVE--EVLRINYKFLM-SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS- 132

Query: 64  KRYARKNRLTNHL---RTHE-------AGSG----------DEKSEGGEG------SFTC 97
            R     +L   L   R  +        GSG            K +          +   
Sbjct: 133 -RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191

Query: 98  SQCPKTFVDK-WHLNRHLK-------SHSENKVFRCEQCRF---DFYVKREYNRHMKIHD 146
              P+T ++    L   +         HS N   R    +         + Y   + +  
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251

Query: 147 GV------KVFL--CSVC----SKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNL 194
            V        F   C +      K  TD +        H  +        S + T     
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAAT--TTHISLDHH-----SMTLTPDEVK 304

Query: 195 NIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHM 254
           ++ L+  D                  DL R         P   S+ A+  S +D L    
Sbjct: 305 SLLLKYLD--------------CRPQDLPREVL---TTNPRRLSIIAE--SIRDGLATW- 344

Query: 255 KIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH-DGLKPFHCSVCFESFTQKALLNIHLRIH 313
              +  K   C          D L   + +  + L+P      F+     ++      I 
Sbjct: 345 ---DNWKHVNC----------DKLTTIIESSLNVLEPAEYRKMFDRL---SVFPPSAHIP 388

Query: 314 T--------NSKPHACSICTESFSQKS--------------NLYIHLKLQHGVNPFKCDV 351
           T        +       +      + S              ++Y+ LK++          
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK---------- 438

Query: 352 CPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKK------SVLKEHLRV---SHNVN 402
             NE        +LH   V      K    D+  P        S +  HL+       + 
Sbjct: 439 LENEY-------ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT 491

Query: 403 PFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQ---EHVDKCHNLHEEDE 459
            F+      +F     L   I+ H+    +    I      L+    ++      +E   
Sbjct: 492 LFR-----MVFLDFRFLEQKIR-HDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV 545

Query: 460 EEGLDEFDAPKEKSFNCSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDAD 518
              + +F    E++  CSK  +++RI     +L+ +   E +     +   E+A +   
Sbjct: 546 NA-ILDFLPKIEENLICSKYTDLLRI-----ALMAE--DEAI-----F---EEAHKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.7 bits (128), Expect = 1e-07
 Identities = 95/636 (14%), Positives = 182/636 (28%), Gaps = 201/636 (31%)

Query: 12  DANEEE--SKDIEKLVIEESASEDSDDEEDEDFENDENSSGKKMVKKFKCN---ICPKRY 66
           +  E +   KDI   V E++  ++ D ++ +D         K ++ K + +   +     
Sbjct: 10  ETGEHQYQYKDILS-VFEDAFVDNFDCKDVQDMP-------KSILSKEEIDHIIMSKDAV 61

Query: 67  ARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVD-------KWHLNRHLKSHSE 119
           +   RL   L + +                  +  + FV+       K+ ++      +E
Sbjct: 62  SGTLRLFWTLLSKQ-----------------EEMVQKFVEEVLRINYKFLMSPI---KTE 101

Query: 120 NKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFL-CSVCSKTFTDKVKFN-RHMRAHEGI- 176
            +        +     R YN         +VF   +V       K++     +R  + + 
Sbjct: 102 QRQPSMMTRMYIEQRDRLYN-------DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154

Query: 177 --------KPFQC---SVC-SESFTQRSNLNIH-------LRIHDGIRPFQCNVCYICFT 217
                   K        VC S     + +  I              +   Q  + Y    
Sbjct: 155 IDGVLGSGK--TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ-KLLY---- 207

Query: 218 NKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDD 277
            + D N  SR  +     L     +  S + +L R +K    SK Y       C     +
Sbjct: 208 -QIDPNWTSRSDHSSNIKL-----RIHSIQAELRRLLK----SKPY-----ENCLLVLLN 252

Query: 278 LNRHMRNHDGLKPF--HCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLY 335
           +    +N      F   C         K LL       T  K     + T+  S  +   
Sbjct: 253 V----QNAKAWNAFNLSC---------KILLT------TRFK----QV-TDFLS--AATT 286

Query: 336 IHLKLQHGVNPFKCDVCPNETFEKETQLS--LHMRT------VHGVKPFKCSMCDEGFPK 387
            H+ L H               E ++ L   L  R       V    P + S+  E    
Sbjct: 287 THISLDHHSMTL-------TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE---- 335

Query: 388 KSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPE---IFEKKTDL 444
              +++ L    N     CD   KL    + + + +   EP    K  +   +F     +
Sbjct: 336 --SIRDGLATWDNWKHVNCD---KL---TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387

Query: 445 QEHVDKC--HNLHEEDEEEGLDEFDA-------PKEKSFNCSKCLNIVRIPVEI-----K 490
              +      ++ + D    +++          PKE + +       +++ +E      +
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447

Query: 491 SLVEK--------LTSEGVPAVQAY------------EHGEDAARDADILVTATYSSVPV 530
           S+V+               P +  Y            EH E        L    +     
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT-----LFRMVF----- 497

Query: 531 LKYEWLKKKDAHINAVGAGLNHHSEL-----DAAIY 561
           L + +L++K   I       N    +         Y
Sbjct: 498 LDFRFLEQK---IRHDSTAWNASGSILNTLQQLKFY 530

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 3e-05
 Identities = 54/324 (16%), Positives = 96/324 (29%), Gaps = 111/324 (34%)

Query: 311 RIHTNSK-PHACSICTESFSQKSNLYIHLKLQHGVNPF-KCDVCPNETFEKETQLSLHMR 368
            I T  + P   S+ T  + ++ +     +L +    F K +V   + + K  Q  L +R
Sbjct: 97  PIKTEQRQP---SMMTRMYIEQRD-----RLYNDNQVFAKYNVSRLQPYLKLRQALLELR 148

Query: 369 -----TVHGVKPFKCSMCDEGFPKKSVL-KEHLRVSHNVNPFKCDICFKLF-TKKSNLRT 421
                 + GV          G   K+ +  +    S+ V   +C + FK+F     N   
Sbjct: 149 PAKNVLIDGVL---------GS-GKTWVALDVCL-SYKV---QCKMDFKIFWLNLKN--- 191

Query: 422 HIKTHEPIPCDKCPEIFEKKTDLQEHVDKCHN----------LHEEDEEEGLDEFDAPKE 471
                    C+    + E    L   +D              L     +  L      K 
Sbjct: 192 ---------CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL--LKS 240

Query: 472 KSFNCSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYSSVPVL 531
           K +    CL ++   V+                 A+           IL+T  +  V   
Sbjct: 241 KPYE--NCLLVLL-NVQNAKAWN-----------AFNLS------CKILLTTRFKQV--- 277

Query: 532 KYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQV------ 585
                       + + A    H  LD     H S+    +     E+K L  +       
Sbjct: 278 -----------TDFLSAATTTHISLD-----HHSMTLTPD-----EVKSLLLKYLDCRPQ 316

Query: 586 --PANMVGE---VGGLIAANLTRD 604
             P  ++        +IA ++ RD
Sbjct: 317 DLPREVLTTNPRRLSIIAESI-RD 339

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++C  C + +  + NL++H ++H G RP   +
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                  G +P++C  C   + +K +L+ H ++H G +P   S
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C  C + +  K  L++H ++HT  +P   S
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 4e-09
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ C  C K ++ K +L+ H K+H G +    +
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                 T  KP+ C  C + ++ K NL +H K+  G  P   
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C  C K +  K +L+ H + H G +P   S
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C  C K +  K   + H + H G +P   S
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G  PF CS C + FT ++NL IH +IH G RP   +
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G  PF C+ C   FT+K++L  H +IH G +P   S
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G  PF+CS C K F+ K +L  H KIH G +    +
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G  PF CS C + FT K  L IH +IHT  +P   S
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 4e-08
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G   ++C+ C K FT K +L  H + H G +P   S
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T   P  CS C + F+ K+NL IH K+  G  P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G   F+CS C K FT K     H + H G +P   S
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G +P+ C+VC ++FT RSNL  H +IH G +P   +
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 5e-10
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
                  G +P++C++C K F+ + +L +H KIH G K    
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.6 bits (130), Expect = 7e-10
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G RP+ C VC   FT++S+L +H +IH G KP   S
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.6 bits (130), Expect = 7e-10
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G +P+ C+VC ++FT ++ L  H +IHT  KP   S
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G + Y+CT+C K FT + +L +H + H G KP   S
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 3e-07
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  +P+ C++C ++F+ +SNL  H K+  G  P   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 4e-07
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G + ++C+VC K FTD+    +H + H G KP   S
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++CS C +SFT +S L IH + H G R    +
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ CS C +SFT K+ L IH + HT  +    S
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C+ C   FT KS L  H + H G +    S
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ CS C K F+ K  L  H K H G +    +
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C+ C K FT K  L  H + H G +    S
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ CS C +SF+ KS L IH K   G      
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + CS C K+FT K +   H + H G +    S
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
              +  G KP+KCS C + F  KS L+ H +          
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KPF+C  C + FTQ S L+ H R+H G +P   +
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 4e-10
 Identities = 17/43 (39%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KPF C  C + FTQ + L+ H R+HT  KP   S
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 +G KPF C  C K F++   L+ H ++H G K    +
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PF+C  C   FT  S L+ H R+H G KP   S
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-08
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K + C  C K FT+   L+ H R H G KP   S
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +  KP  C  C + F+Q S L+ H ++  G  P   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 15/43 (34%), Positives = 17/43 (39%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K F C  C K FT   + + H R H G KP   S
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KPFQC  C + FTQ S+L+ H R+H G +P   +
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 8e-10
 Identities = 17/43 (39%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KPF C  C + FTQ + L+ H R+HT  KP   S
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 +G KPF C  C K F++   L+ H ++H G K    +
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PFQC  C   FT  S L+ H R+H G KP   S
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K + C  C K FT+   L+ H R H G KP   S
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 9e-07
 Identities = 15/43 (34%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K F C  C K FT     + H R H G KP   S
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +  KP  C  C + F+Q S+L+ H ++  G  P   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 14/43 (32%), Positives = 26/43 (60%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G+KP+ CS C+++F+ +S L +H R H G++P   +
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 54.8 bits (133), Expect = 3e-10
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G+KP+ CS C ++F+ K+ L +H R HT  KP   S
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G+KP+ CS CAK FS K  L  H + H G K    +
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 50.6 bits (122), Expect = 7e-09
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G++P+ C+ C   F+ KS L  H R H G+KP   S
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ CS C ++FS KS L +H +   GV P   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 48.7 bits (117), Expect = 5e-08
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C+ C K F+ K  L  H R+H G+KP   S
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  GVK + CS C+KTF+ K +   H R+H G+KP   S
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KPF+C  C +S+ QR +L  H R+H G +P   +
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KPF C  C +S+ Q+  L  H R+HT  KP   S
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KPF C  C K ++++  L +H ++H G K    +
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PF+C  C   +  +  L +H R+H G KP   S
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K + C  C K + ++  L +H R H G KP   S
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K F C  C K++  +V   +H R H G KP   S
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP  C  C +S++Q+ +L  H ++  G  P   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KPF+C+ C +SF  + NL  H RIH G +    +
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 53.3 bits (129), Expect = 8e-10
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KPF C+ C K F  K +L  H +IH G K    +
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                  G +PF+C  C   F  K +L  H RIH G K    S
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KPF C+ C +SF  K  L  H RIHT  K    S
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K + CT C K F  K +L  H R H G K    S
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                 T  KP  C+ C +SF  K NL  H ++  G      
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 44.8 bits (107), Expect = 9e-07
 Identities = 14/42 (33%), Positives = 16/42 (38%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K F C+ C K+F  K     H R H G K    S
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 16/43 (37%), Positives = 27/43 (62%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++CSVC ++F+ R +L++H RIH G +P   +
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ CSVC ++F+ +  L++H RIH+  KP   S
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 5e-09
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ CS+C K FS +  L+ H +IH G K    +
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                  G +P++C+VC   F+++  L+ H RIH+G KP   S
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C++C K F+ +  L+ H R H G KP   S
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 8e-07
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                 T  KP+ CS+C ++FS + +L +H ++  G  P   
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + CSVC K F+ +   + H R H G KP   S
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 3e-11
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C VCS++FTQ+++L  H + H G +P   +
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 9e-10
 Identities = 18/43 (41%), Positives = 23/43 (53%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C VC ++FTQKA L  H + HT  KP   S
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C +C+K F++K  L +H K H G K    +
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 5e-09
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C VC   FT K+ L +H + H G KP   S
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 8e-08
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C +C K FT+K  L +H + H G KP   S
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C +C+++F+QK++L  H K   G  P   
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 8e-07
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C VCSK FT K    +H + H G KP   S
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 3e-11
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KPF+C +C +SF  RS LN H  +H   +P   +
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 9e-10
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PF+C++C   F  +S LNRHS +H   KP   S
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KPF C +C +SF  ++ LN H  +HT  KP   S
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 2e-09
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KPF C +C K F  +  LNRH  +H   K    +
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 3e-08
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K + C +C K F  +  LNRH   H   KP   S
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
                T  KP  C IC +SF  +S L  H  +     P    
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 3e-07
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K F C +C K+F  + + NRH   H   KP   S
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD 407
              +  G KPFKC +C + F  +S L  H  V     P    
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 3e-11
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
               +  G KPF+CS C ++F  +SNL +H R H G +P   
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 4e-10
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KPF CS C K F+ K +L  H + H G K    +
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 5e-10
 Identities = 17/43 (39%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KPF CS C ++F  K+ L +H R HT  KP   S
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PF+C+ C   F  KS+L  H R H G KP   S
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K + C+ C K F  K +L  H R H G KP   S
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP  CS C ++F+ KSNL +H +   G  P   
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 16/43 (37%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K F CS C K F  K     H R H G KP   S
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 3e-11
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C  C ++F Q++NL  H RIH G +P   +
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C  C K F++K +L +H +IH G K    +
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 18/43 (41%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C  C ++F QKA L  H RIHT  KP   S
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-09
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C  C   F  K++L +H RIH G KP   S
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K F +K +L +H R H G KP   S
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C  C ++F+QK+NL  H ++  G  P   
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C  C K F  K    +H R H G KP   S
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 4e-11
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +    KP++C  C + + +R NL++H R+H G +    +
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +    KP+ C  C + + ++  L++H R+H   K    S
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 5e-09
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                +  KP+ C  C K ++R+ +L+ H ++H G K    +
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                   +P++C  C   +  + +L+ H R+H G K    S
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                   K Y C  C K + R+ +L+ H R H G K    S
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 8/41 (19%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +  KP+ C  C + ++++ NL +H ++  G      
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 10/42 (23%), Positives = 15/42 (35%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                   K + C  C K +  ++  + H R H G K    S
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 57.3 bits (139), Expect = 4e-11
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 225 HSRIHNGIKPFLCS--MCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KPF C+   C   FSR D+L+RH + H G K    +
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 55.8 bits (135), Expect = 2e-10
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 169 HMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KPF C+   C   F++   L+ H R H G++P   +
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 54.6 bits (132), Expect = 4e-10
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 253 HMKIHEGSKRYLCT--MCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K + CT   C   F+R D+L+RH R+H G+KP   S
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 54.2 bits (131), Expect = 5e-10
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 197 HLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PF C    C   F+   +L+RH R H+G+KP   S
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 281 HMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KPF C+   C   F++   L+ H R H+  KP   S
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 45.8 bits (109), Expect = 4e-07
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 141 HMKIHDGVKVFLCSV--CSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K F C+   C   F+   + +RH R+H G+KP   S
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 309 HLRIHTNSKPHACS--ICTESFSQKSNLYIHLKLQHGVNPFKCD 350
                T  KP AC+   C   FS+   L  H +   GV P    
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 4e-11
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
               +  G KP+ CS C ++F+ +S L IH+R H G +P   
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ CS C ++F+ K+ L IH+R H+  KP   S
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 16/43 (37%), Positives = 19/43 (44%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ CS C K FS K  L  HM+ H G K    +
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P+ C+ C   F++KS L  H R H+G KP   S
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 17/43 (39%), Positives = 19/43 (44%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C+ C K F+ K  L  HMR H G KP   S
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                   KP+ CS C ++FS KS L IH++   G  P   
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 16/43 (37%), Positives = 18/43 (41%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + CS C K F+ K     HMR H G KP   S
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 5e-11
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G +P +C+ C +SF Q ++L  H RIH G +P   +
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 17/43 (39%), Positives = 21/43 (48%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G +P  C+ C +SF Q A L  H RIHT  KP   S
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 2e-09
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G +P  C+ C K F +   L +H +IH G K    +
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G RP +CN C   F   + L +H RIH G KP   S
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G + + C  C K F +   L +H R H G KP   S
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  +PH C+ C +SF Q ++L  H ++  G  P   
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G +   C+ C K+F       +H R H G KP   S
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 5e-11
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C+ C + FTQ S+L  H RIH G +P   +
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 +G KP+ C+ C K F++   L  H +IH G K    +
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-09
 Identities = 17/43 (39%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C+ C + FTQ + L  H RIHT  KP   S
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++CN C   FT  S L  H RIH G KP   S
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 16/43 (37%), Positives = 17/43 (39%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K FT+   L  H R H G KP   S
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +  KP+ C+ C + F+Q S+L  H ++  G  P   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C+ C K FT       H R H G KP   S
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 5e-11
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G K ++C VC + F+Q S+L  H R+H G +P   +
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                  G + ++C+VC   F+  S L  H R+H G KP   S
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G K + C VC + F+Q + L  H R+HT  KP   S
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-08
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G K + C +C K FS+   L  H ++H G K    +
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                    K + C +C + FSQ S+L  H ++  G  P   
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C +C K F++   L  H R H G KP   S
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 14/42 (33%), Positives = 16/42 (38%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C VC K F+       H R H G KP   S
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 5e-11
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C+ C + FTQ S+L  H RIH G++P   +
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 2e-09
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C+ C K F++   L  H +IH G K    +
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-09
 Identities = 17/43 (39%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C+ C + FTQ + L  H RIHT  KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++CN C   FT  S L  H RIH G+KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 16/43 (37%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K FT+   L  H R H G+KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 7e-07
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C + F+Q S+L  H ++  GV P   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C+ C K FT       H R H G+KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.7 bits (138), Expect = 5e-11
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KPF+C  C ++F Q  +L  HLRIH G +P   +
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 5e-10
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 +G KPF C  C K F +   L  H++IH G K    +
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-09
 Identities = 18/43 (41%), Positives = 21/43 (48%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KPF C  C ++F Q   L  HLRIHT  KP   S
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 8e-09
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PF+C  C   F     L  H RIH G KP   S
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K + C  C K F +   L  H+R H G KP   S
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K F C  C K F   +    H+R H G KP   S
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +  KP  C  C ++F Q  +L  HL++  G  P   
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 6e-11
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP+ C+ C ++FT RSNL  H +IH   +P   +
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP++C+ C K F+ + +L +H KIH   K    +
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C+ C ++FT ++ L  H +IHT  KP   S
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 4e-09
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P+ C  C   FT +S+L +H +IH   KP   S
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 3e-08
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y+C  C K FT + +L +H + H   KP   S
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 7e-07
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C ++F+ +SNL  H K+     P   
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 9e-07
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K ++C+ C K FT +    +H + H   KP   S
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 6e-11
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP+ C+VC ++F   ++LN HLR+H        +
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C+VC ++F   A LN HLR+HT       S
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C++C K F     LN+H+++H        +
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-09
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P+ CNVC   F   + LN+H R+H        S
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C +C K F     LN+H+R H        S
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C+VC K F      N+H+R H        S
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
                T  KP++C++C ++F   ++L  HL++          
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 6e-11
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP +C  C +SF+  S L +H RIH G  P   +
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP  C  C +SF+  + L +H RIHT   P   S
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 13/43 (30%), Positives = 15/43 (34%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP  C  C K FS    L  H +IH G      +
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P +C  C   F+  S L  H RIH G  P   S
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 13/43 (30%), Positives = 15/43 (34%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K + C  C K F+    L  H R H G  P   S
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KPH C  C +SFS  S L +H ++  G NP   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 12/43 (27%), Positives = 15/43 (34%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K   C  C K+F+   +   H R H G  P   S
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 7e-11
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C+ C ++F  RS+L IH   H G +P   +
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C+ C ++F  ++ L IH   H+  KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 4e-09
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C+ C K F  +  L  H   H G K    +
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 4e-09
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++CN C   F  +S L  H   H+G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 14/43 (32%), Positives = 15/43 (34%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K F  +  L  H   H G KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C ++F  +S+L IH     G  P   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 12/43 (27%), Positives = 15/43 (34%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C+ C K F  +     H   H G KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 7e-11
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G K F+C+ C ++FTQ S+L +H RIH G +P   +
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G K F C+ C ++FTQ + L +H RIHT  KP   S
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 17/42 (40%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G + F+CN C   FT  S L  H RIH G KP   S
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G K F C+ C K F++   L  H +IH G K    +
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K + C  C K FT+   L  H R H G KP   S
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 7e-07
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                   K   C+ C ++F+Q S+L +H ++  G  P   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K+F C+ C KTFT       H R H G KP   S
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.7 bits (138), Expect = 7e-11
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++CS C ++F + ++LN H RIH G RP   +
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 +G KP+ CS C K F R   LN H +IH G +    +
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ CS C ++F +   LN H RIHT  +P   S
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C+ C   F   + LN H RIH G +P   S
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 16/43 (37%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C+ C K F R   LN H R H G +P   S
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 14/43 (32%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + CS C K F      N H R H G +P   S
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +  KP+ CS C ++F + ++L  H ++  G  P   
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 7e-11
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++CS C +SF ++S L++H RIH G  P   +
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ CS C +SF +K+ L++H RIHT   P   S
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C+ C   F  KS L+ H RIH G  P   S
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
                 G KP+ CS C K F +K  L+ H +IH G      
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C+ C K F +K  L+ H R H G  P   S
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-08
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ CS C +SF +KS L++H ++  G NP   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + CS C K+F  K + + H R H G  P   S
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 7e-11
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G + ++CS C ++F ++S L +H RIH G +P   +
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 6e-10
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G + + CS C K F+RK  L  H +IH G K    +
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 9e-10
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G + + CS C ++F +K+ L +H RIHT  KP   S
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G R ++C+ C   F  KS L  H RIH G KP   S
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 16/43 (37%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G + Y C+ C K F RK  L  H R H G KP   S
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  + + CS C ++F++KS L +H ++  G  P   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G + + CS C K F  K     H R H G KP   S
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 56.4 bits (137), Expect = 7e-11
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C  C ++F+Q ++L  H R+H G +P   +
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C  C K FS+   L +H ++H G K    +
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C  C ++F+Q   L  H R+HT  KP   S
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C  C   F+  + L +H R+H G KP   S
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 47.9 bits (115), Expect = 8e-08
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K F++   L +H R H G KP   S
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C  C ++FSQ ++L  H ++  G  P   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C  C K F+      +H R H G KP   S
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 7e-11
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C VC ++F   S+L  H  +H G RP   +
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C VC   F   S L +H  +H+G +P   S
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C +C K F     L +H  +H G +    +
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C VC ++F   + L  H  +H+  +P   S
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C +C K F     L +H   H G +P   S
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C +C ++F   S+L  H  +  G  P   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 12/43 (27%), Positives = 15/43 (34%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C VC K F       +H   H G +P   S
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 57.4 bits (138), Expect = 8e-11
 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 7/72 (9%)

Query: 192 SNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLN 251
            +     +IH G R  +C+ C I F  +S L+R        K  +C  C K   ++  LN
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56

Query: 252 RHMKIHEGSKRY 263
           +      G K  
Sbjct: 57  KDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 55.1 bits (132), Expect = 5e-10
 Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 7/73 (9%)

Query: 250 LNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH 309
             +  KIH G +   C+ C   F R+  L+R        K   C  C +   Q+A LN  
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKD 58

Query: 310 LRIHTNSKPHACS 322
               +  K    S
Sbjct: 59  EGNESGKKTSGPS 71

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 54.7 bits (131), Expect = 6e-10
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 7/70 (10%)

Query: 166 FNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRH 225
             +  + H G +  +CS C   F +RS L+         +   C  C      ++ LN+ 
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKD 58

Query: 226 SRIHNGIKPF 235
               +G K  
Sbjct: 59  EGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 50.8 bits (121), Expect = 1e-08
 Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 137 EYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNI 196
              +  KIH G +   CS C   F  +   +R        K   C  C +   Q + LN 
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNK 57

Query: 197 HLRIHDGIRPF 207
                 G +  
Sbjct: 58  DEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.3 bits (99), Expect = 1e-05
 Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 8/71 (11%)

Query: 306 LNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSL 365
                +IH   +   CS C   F ++S L              C+ C  +   +E  L+ 
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKC-RKDSCQEAALNK 57

Query: 366 HMRTVHGVKPF 376
                 G K  
Sbjct: 58  DEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 41.2 bits (96), Expect = 4e-05
 Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 109 HLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNR 168
              +  K H  ++  +C +C   F  +   +R        K  +C  C K    +   N+
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNK 57

Query: 169 HMRAHEGIKPF 179
                 G K  
Sbjct: 58  DEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.4 bits (94), Expect = 6e-05
 Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 7/66 (10%)

Query: 361 TQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLR 420
                  +   G +  KCS C   F ++S L              C+ C K   +++ L 
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56

Query: 421 THIKTH 426
                 
Sbjct: 57  KDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 7/61 (11%)

Query: 91  GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKV 150
           G+ S  CS+C   F           + S  K   CE+CR D   +   N+      G K 
Sbjct: 15  GDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKT 67

Query: 151 F 151
            
Sbjct: 68  S 68

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.4 bits (137), Expect = 8e-11
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G +P++C  C ++F  +S+L  H R H G +P   +
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G +P+ C  C ++F  K+ L  H R HT  KP   S
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G +P+ C  C K F  K  L  H + H G K    +
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G RP++C  C   F  KS L  H R H G KP   S
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 15/43 (34%), Positives = 17/43 (39%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G + Y C  C K F  K  L  H R+H G KP   S
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  +P+ C  C ++F  KS+L  H +   G  P   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G + + C  C K F  K     H R+H G KP   S
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 56.4 bits (137), Expect = 9e-11
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G+ P++CS C +SF+ +  L +H R+H   +P   +
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 53.3 bits (129), Expect = 9e-10
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G+ P+ CS C +SF+ K  L +H R+HT  KP   S
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G+ P+ CS C K FS K  L  H ++H   K    +
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G+ P++C+ C   F+ K  L  H R+H   KP   S
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 14/42 (33%), Positives = 16/42 (38%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G   Y C+ C K F+ K  L  H R H   KP   S
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                    P+ CS C +SFS K  L +H ++     P   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 GV  + CS C K+F+ K++   H R H   KP   S
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC 406
              +  GV P+KCS C++ F  K  L  H R+     P   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 56.0 bits (136), Expect = 9e-11
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KPF+C  C + F++RS LN+H ++H G +P   +
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 53.7 bits (130), Expect = 7e-10
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KPF C  C K FSR+  LN H K+H G K    +
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 53.7 bits (130), Expect = 8e-10
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KPF C  C + F++++ LN+H ++HT  KP   S
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 52.1 bits (126), Expect = 3e-09
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PF+C  C   F+ +S LN H ++H G KP   S
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K + C  C K F+R+  LN H + H G KP   S
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP  C  C + FS++S L +H KL  G  P   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K F C  C K F+ +   N H + H G KP   S
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C+ C ++F+ RS+L  H  IH G +P   +
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C+ C K FS +  L  H  IH G K    +
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 5e-09
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++CN C   F+ +S L  H  IH G KP   S
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 8e-09
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C+ C ++F+ ++ L  H  IHT  KP   S
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 14/43 (32%), Positives = 16/43 (37%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K F+ +  L  H   H G KP   S
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C ++FS +S+L  H  +  G  P   
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C+ C K F+ +     H   H G KP   S
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 14/42 (33%), Positives = 25/42 (59%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G + ++CS C ++F Q+S L++H RIH G +P   +
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G + + CS C ++F QK+ L++H RIH   KP   S
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 4e-09
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G R ++C+ C   F  KS L+ H RIH G KP   S
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G + + CS C K F +K  L+ H +IH G K    +
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G + Y C+ C K F +K  L+ H R H G KP   S
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  + + CS C ++F QKS L +H ++  G  P   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G + + CS C K F  K   + H R H G KP   S
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 14/43 (32%), Positives = 26/43 (60%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G K F+C+ C ++FT++S L++H +IH G +P   +
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G K F C+ C K F+RK  L+ H KIH G K    +
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 2e-09
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G K F C+ C ++FT+K+ L++H +IHT  KP   S
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-09
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G + F+C  C   FT KS L+ H +IH G KP   S
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K + CT C K FTRK  L+ H + H G KP   S
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  K   C+ C ++F++KS L +H K+  G  P   
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K F C+ C K FT K   + H + H G KP   S
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++C  C + + +R +L+ H R+H G +    +
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 7e-10
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                +G KP+ C  C K + R+ DL+ H ++H G K    +
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C  C + + ++  L+ H R+HT  K    S
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C  C   +  + DL+ H R+H G K    S
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C  C K + R+ DL+ H R H G K    S
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 7/42 (16%), Positives = 16/42 (38%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
                +  KP+ C  C + + ++ +L  H ++  G       
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C  C K +  ++  + H R H G K    S
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.9 bits (136), Expect = 1e-10
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C  C + F + S+L  H  IH G +P   +
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 6e-10
 Identities = 15/43 (34%), Positives = 17/43 (39%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C  C K F R   L RH  IH G K    +
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.9 bits (123), Expect = 6e-09
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C  C + F + + L  H  IHT  KP   S
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.9 bits (123), Expect = 7e-09
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C+ C   F   S L RH  IH G KP   S
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 5e-08
 Identities = 16/43 (37%), Positives = 16/43 (37%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K F R   L RH   H G KP   S
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 14/43 (32%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C  C K F       RH   H G KP   S
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C  C + F + S+L  H  +  G  P   
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C+ C ++F+Q S L  H RIH G +P   +
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C+ C K FS+   L RH +IH G K    +
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C+ C ++F+Q + L  H RIHT  KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++CN C   F+  S L RH RIH G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 16/43 (37%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K F++   L RH R H G KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C ++FSQ S L  H ++  G  P   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C+ C K F+   K  RH R H G KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP+ C  C +SF   S L  H R+H G +P   +
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP++C  C +SF   + L  H R+H+  KP   S
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C  C K F     L +H ++H G K    +
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P+ C  C   F   S L +H R+H+G KP   S
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 15/43 (34%), Positives = 16/43 (37%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K F     L +H R H G KP   S
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C  C +SF   S L  H ++  G  P   
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C  C K+F       +H R H G KP   S
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
               +  G KP++C+ C ++F  +S L +H R H G+     
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.1 bits (131), Expect = 5e-10
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
               +  G KP+ C+ C ++F  K+LL +H R H      + 
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.0 bits (123), Expect = 7e-09
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
                 +G KP+ C+ C K F  K  L  H + H G      
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
                 G +P++CN C   F  KS L  H R H G+     
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 13/42 (30%), Positives = 14/42 (33%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
                  G K Y C  C K F  K  L  H R H G+     
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +  KP+ C+ C ++F  KS L +H +   GV+    
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 11/42 (26%), Positives = 14/42 (33%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
                  G K + C+ C K F  K     H R H G+     
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP+ C  C ++F   + L  H RIH G +P   +
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 6e-10
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 +G KP++C  C K F    +L RH +IH G K    +
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P+ C+ C   F   ++L RH RIH G KP   S
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C  C ++F   A L  H RIHT  KP   S
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 16/43 (37%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y+C  C K F    +L RH R H G KP   S
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K ++C  C K F    +  RH R H G KP   S
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +  KP+ C  C ++F   + L  H ++  G  P   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++C VC +SF   S+L +H RIH G +P   +
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C+VC+  F   S L  H RIH G KP   S
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C VC +SF   + L +H RIHT  KP   S
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ C +C K F     L  H +IH G K    +
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C +C +SF   S+L +H ++  G  P   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 15/42 (35%), Positives = 16/42 (38%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C +C K F     L  H R H G KP   S
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 14/42 (33%), Positives = 16/42 (38%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C VC K+F        H R H G KP   S
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G K ++C  C   F+Q S+L +H  +H G +P   +
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G K + C  C   F+Q + L +H  +H   KP   S
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G K + C  C  CFS+   L  H  +H G K    +
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G + ++C  C +CF+  S L  H  +H G KP   S
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K + C  C  CF++   L  H   H G KP   S
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 11/41 (26%), Positives = 14/41 (34%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                   K   C  C   FSQ S+L +H  +  G  P   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 11/42 (26%), Positives = 13/42 (30%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C  C   F+       H   H G KP   S
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 58.4 bits (140), Expect = 1e-10
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 14/125 (11%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYIC----FTNKSDLN 223
           +++  H+GI      V  E          H    +  R  +  V  +       ++S   
Sbjct: 12  KYLSNHKGIF---IHVTLEEL-----KRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYL 63

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMR 283
                   I  F+C +C   FS    L +H++  E +K   C +C K FT  D    H+ 
Sbjct: 64  YRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV--CPVCKKEFTSTDSALDHVC 121

Query: 284 NHDGL 288
               +
Sbjct: 122 KKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 49.9 bits (118), Expect = 1e-07
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 5/100 (5%)

Query: 360 ETQLSLHMRTVHGVKPFKC----SMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTK 415
           E     H  T    +  +      + +     +S     L  S  ++ F C +C   F+ 
Sbjct: 27  EELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSS 86

Query: 416 KSNLRTHIKTHE-PIPCDKCPEIFEKKTDLQEHVDKCHNL 454
             +L+ HI+  E    C  C + F       +HV K HN+
Sbjct: 87  SVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 49.2 bits (116), Expect = 2e-07
 Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 2/98 (2%)

Query: 107 KWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKF 166
           ++H     +      + +          +  Y   +     +  F+C +C   F+  V  
Sbjct: 31  RYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSL 90

Query: 167 NRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGI 204
            +H+R  E      C VC + FT   +   H+     I
Sbjct: 91  KQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKKHNI 126

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 46.1 bits (108), Expect = 2e-06
 Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 6/126 (4%)

Query: 219 KSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDL 278
            S   ++   H GI      +  +   R   L    K    +        P+    +   
Sbjct: 7   DSGSKKYLSNHKGIF---IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQ-LLDESSY 62

Query: 279 NRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHL 338
              +     +  F C +C   F+    L  H+R   ++K   C +C + F+   +   H+
Sbjct: 63  LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV--CPVCKKEFTSTDSALDHV 120

Query: 339 KLQHGV 344
             +H +
Sbjct: 121 CKKHNI 126

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP+ C  C ++F   S L  H RIH G +P   +
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C  C K F     L  H +IH G K    +
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 4e-09
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP++C  C ++F   + L  H RIHT  KP   S
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P+ C  C   F + S L  H RIH G KP   S
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 15/43 (34%), Positives = 15/43 (34%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K F     L  H R H G KP   S
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C  C ++F   S L  H ++  G  P   
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 15/43 (34%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C  C K F    +   H R H G KP   S
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 12/43 (27%), Positives = 23/43 (53%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G K ++C+ C + F++ S L+ H +IH G +P   +
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 52.1 bits (126), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G K + C+ C K FSR   L++H KIH G K    +
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G + ++CN C   F+  S L++H +IH G KP   S
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G K + C+ C + F++ + L+ H +IHT  KP   S
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 47.9 bits (115), Expect = 8e-08
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G KRY C  C K F+R   L++H + H G KP   S
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  K + C+ C + FS+ S L  H K+  G  P   
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C+ C K F+   + ++H + H G KP   S
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C+ C + FTQ S+L  H  IH G +P   +
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C+ C K F++   L RH  IH G K    +
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 4e-09
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++CN C   FT  S L RH  IH G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C+ C + FTQ + L  H  IHT  KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 8e-08
 Identities = 16/43 (37%), Positives = 17/43 (39%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K FT+   L RH   H G KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C + F+Q S+L  H  +  G  P   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 14/43 (32%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C+ C K FT      RH   H G KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C+ C + F   S L+ H RIH G +P   +
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 2e-09
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP+ C+ C K F     L+RH +IH G K    +
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++CN C   F + S L+RH RIH G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 8e-09
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C+ C + F   + L+ H RIHT  KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 16/43 (37%), Positives = 17/43 (39%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K F     L+RH R H G KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C + F   S L  H ++  G  P   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C+ C K F      +RH R H G KP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G +PF+C+ C + F +RS+L  HLR+H   +    +
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 7e-09
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G +PF C+ C + F +++ L  HLR+H+  K    S
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 +G +PF C+ C K F R+  L  H+++H   K    +
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G RPF+CN C   F  +S L  H R+H+  K    S
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G + + C  C K F R+  L  H+R H   K    S
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +  +P  C+ C + F ++S+L  HL+L         
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 11/43 (25%), Positives = 15/43 (34%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G + F C+ C K F  +     H+R H   K    S
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
              +  G KP++C+ C ++F  +SNL +H R H G      
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
                  G +P++CN C   F  KS+L  H R H G      
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.9 bits (123), Expect = 5e-09
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
                 G KP+ C+ C K F+ K +L  H + H G      
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.6 bits (122), Expect = 8e-09
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
              +  G KP+ C+ C ++F  K+ L +H R HT     + 
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.6 bits (117), Expect = 5e-08
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                 T  KP+ C+ C ++F+ KSNL +H +   G +    
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 13/41 (31%), Positives = 14/41 (34%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
                 G K Y C  C K F  K +L  H R H G      
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 11/41 (26%), Positives = 13/41 (31%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
                 G K + C+ C K F  K     H R H G      
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
               +  G KPF+C+ C +SF+  S L  H RIH G +P   
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 53.7 bits (130), Expect = 8e-10
 Identities = 17/43 (39%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KPF C+ C +SF+  + L  H RIHT  KP   S
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 53.3 bits (129), Expect = 9e-10
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KPF C+ C K FS    L  H +IH G K    +
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 51.3 bits (124), Expect = 4e-09
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PF+C  C   F+  S L  H RIH G KP   S
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 14/43 (32%), Positives = 16/43 (37%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K + C  C K F+    L  H R H G KP   S
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 46.3 bits (111), Expect = 3e-07
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP  C+ C +SFS  S L  H ++  G  P   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K F C+ C K+F+   +   H R H G KP   S
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP++C  C ++F Q  +LN H R+H G R    +
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C  C ++F Q   LN H R+HT  +    S
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
                 +G KP+ C  C K F +   LN+H ++H G +    
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C  C   F     LN+H R+H G +    S
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K F +   LN+H R H G +    S
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C  C KTF      N+H R H G +    S
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +  KP+ C  C ++F Q  +L  H ++  G      
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 55.3 bits (134), Expect = 2e-10
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHL-RIHDGIRPFQCNVCYICFTN 218
              +    KP+ C  C + F++  +LN H+ ++H   RP +C V     ++
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 55.3 bits (134), Expect = 2e-10
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMK-IHEGSKRYLCTMCPKCFT 273
                +  KP++C  C K FSR D LN H+K +H   + + C +     +
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHL-RIHTNSKPHACSICTESFSQ 330
              +    KP+ C  C + F++   LN H+ ++HT+ +PH C +     S 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 51.0 bits (123), Expect = 8e-09
 Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 1/50 (2%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHS-RIHNGIKPFLCSMCAKCFS 245
                   +P+ C  C   F+    LN H  ++H   +P  C +     S
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRN-HDGLKPFHCSVCFESFTQ 302
                   K Y+C  C K F+R D LN H++  H   +P  C V     + 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQH-GVNPFKCDVC 352
                +  KP+ C  C + FS+  +L  H+K  H    P KC V 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW 47

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRA-HEGIKPFQCSVCSESFTQ 190
                   K ++C  C K F+     N H++  H   +P +C V     + 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 372 GVKPFKCSMCDEGFPKKSVLKEHLRVSHN-VNPFKCDICFKLFT 414
             KP+ C  C +GF +   L  H++  H    P KC +     +
Sbjct: 9   VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 1/51 (1%)

Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMK-IHDGVKVFLCSVCSKTFTD 162
              S S  K + C+ C   F      N H+K +H   +   C V     + 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G+KP+ C+ C ++F+  S+L  H  IH G +P   +
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
                  G+KP++C+ C K FS    L  H  IH G K    
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 7e-09
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G++P+ CN C   F+  S L  H  IH G KP   S
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G+KP+ C+ C ++F+  + L  H  IHT  KP   S
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 9e-08
 Identities = 14/43 (32%), Positives = 16/43 (37%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y+C  C K F+    L  H   H G KP   S
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  GVK ++C+ C K F+       H   H G KP   S
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C ++FS  S+L  H  +  G  P   
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              + EG KP+QCS C +SF+    L  H   H   +P   +
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              + +G KP+ CS C +SF+    L  H   HT  KP   S
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ CS C K FS    L +H   H   K    +
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                +G +P+QC+ C   F+    L +H   H   KP   S
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                EG K Y C+ C K F+    L +H   H   KP   S
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                +G K + CS C K+F+   +  +H   H   KP   S
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 8e-06
 Identities = 11/41 (26%), Positives = 13/41 (31%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                   KP+ CS C +SFS    L  H        P   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
               +  G KP++C+ C ++FT RSNL  H +IH G +P   
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C  C   FT++S+L  H +IH G KP   S
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 2e-09
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
                  G KP+ C+ C K F+ + +L  H KIH G K    
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP+ C+ C ++FT ++ L  H +IHT  KP   S
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K Y C  C K FT + +L  H + H G KP   S
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 3e-07
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C ++F+ +SNL+ H K+  G  P   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K + C+ C K FTD+     H + H G KP   S
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G  P++C  C ++F+++  L  H R H G +P   +
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G  P+ C  C K FSRK  L  H + H G K    +
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-09
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G  P+ C  C ++F++K  L  H R H   KP   S
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G  P++C+ C   F+ K  L  H R H G KP   S
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 16/43 (37%), Positives = 17/43 (39%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G   Y C  C K F+RK  L  H R H G KP   S
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T   P+ C  C ++FS+K  L  H +   G  P   
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G   + C  C K F+ K +   H R H G KP   S
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                +G +P+ C+ C K F R   L  H+K H   K    +
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 4e-09
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G +P+ C+ C ++F + S+L  HL+ H   +    +
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 4e-09
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G RP+ CN C   F   S L  H + H   K    S
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 8e-09
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G + Y C  C K F R   L  H++ H   K    S
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G +P+ C+ C ++F + + L  HL+ H   K    S
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 9/42 (21%), Positives = 14/42 (33%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G + + C+ C K F        H++ H   K    S
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +  +P+ C+ C ++F + S+L  HLK          
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 3e-10
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G K + C  C +SF++   L  H R+H G +P   +
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G K + C  C K FSR   L +H ++H G K    +
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G + + C  C   F+    L +H R+H+G KP   S
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G K ++C  C +SF++   L  H R+H+  KP   S
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C  C K F+R   L +H R H G KP   S
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  K + C  C +SFS+   L  H +L  G  P   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K++ C  C K+F+      +H R H G KP   S
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 3e-10
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP+ C+ C +SF Q+S+LN H RIH G +P   +
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C+ C +SF QK+ LN H RIHT  KP   S
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 3e-09
 Identities = 19/42 (45%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P+ CN C   F  KS LNRH RIH G KP   S
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP++C+ C K F +K  LNRH +IH G K    +
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 18/42 (42%), Positives = 20/42 (47%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y+C  C K F +K  LNRH R H G KP   S
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 9e-07
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C +SF QKS+L  H ++  G  P   
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K ++C+ C K+F  K   NRH R H G KP   S
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 3e-10
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G KP +C+ C ++F  +S L +H R H   +    +
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G KP  C+ C ++F  K+ L +H R H + K    S
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 12/43 (27%), Positives = 15/43 (34%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                  G KP  C+ C K F  K  L  H + H   K    +
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P +C  C   F  KS L  H R H   K    S
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 14/43 (32%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G K   CT C K F  K  L  H R H   K    S
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 10/41 (24%), Positives = 15/41 (36%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP  C+ C ++F  KS L +H +          
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 12/43 (27%), Positives = 14/43 (32%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G K   C+ C K F  K +   H R H   K    S
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 3e-10
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KPF C  C ++F+    LN H RIH G +P   +
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-09
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PF C  C   F++   LN+H RIH G KP   S
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KPF C  C K FS    LN+H +IH G K    +
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 4e-09
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KPF C  C ++F+    LN H RIHT  KP   S
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K + C  C K F+    LN+H R H G KP   S
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K F C  C K F+D +  N+H R H G KP   S
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP  C  C ++FS    L  H ++  G  P   
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.8 bits (133), Expect = 3e-10
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
               +  G+KP+ C+ C ++F  +S L IH R H G      
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
               +  G+KP+ C+ C ++F  K+ L IH R HT     + 
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.9 bits (123), Expect = 6e-09
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
                  G+KP++C+ C K F  K  L  H + H G      
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.6 bits (117), Expect = 4e-08
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
                 G++P+ CN C   F +KS L  H+R H G      
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 13/42 (30%), Positives = 14/42 (33%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
                  G K Y+C  C K F  K  L  H R H G      
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C ++F  KS L IH +   G +    
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 11/42 (26%), Positives = 15/42 (35%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
                  G+K ++C+ C K F  K     H R H G      
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 3e-10
 Identities = 14/42 (33%), Positives = 24/42 (57%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP+ C+ C ++F+Q+S L+ H R H G +P   +
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                  G +P+ CN C   F+ KS L+ H R H G KP   S
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C+ C ++F+QK++L+ H R HT  KP   S
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 7e-09
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                +G KP+ C+ C K FS+K  L+ H + H G K    +
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                 +  KP+ C+ C ++FSQKS L  H +   G  P   
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C  C K F++K  L+ H R H G KP   S
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 6e-06
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C+ C KTF+ K   + H R H G KP   S
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 3e-10
 Identities = 13/42 (30%), Positives = 24/42 (57%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++C VC ++F+  ++L  H R+H G +P   +
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                  G +P++C+VC   F++ + L +H R+H+G KP   S
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ C +C K FS    L +H ++H G K    +
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 3e-08
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C VC ++F+  A L  H R+H+  KP   S
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 7e-07
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C +C K F+    L +H R H G KP   S
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                 T  KP+ C +C ++FS  ++L  H ++  G  P   
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C VC K F+      +H R H G KP   S
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++C  C + F  R +L  H  +H G +P   +
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 4e-09
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C  C   F  + DL  H  +H G KP   S
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ C  C K F  + DL  H  +H G K    +
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C  C + F  +  L  H  +HT  KP   S
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 15/42 (35%), Positives = 16/42 (38%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C  C K F  + DL  H   H G KP   S
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C  C + F  + +LY H  +  G  P   
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 12/42 (28%), Positives = 14/42 (33%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C  C K F  +     H   H G KP   S
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 5e-10
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP+QC+ C ++F+Q S L  H R+H G +P   +
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 17/43 (39%), Positives = 21/43 (48%)

Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                  G +P+QCN C   F+  S L RH R+H G KP   S
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ C+ C K FS+   L RH ++H G K    +
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-08
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C+ C ++F+Q + L  H R+HT  KP   S
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C  C K F++   L RH R H G KP   S
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                 T  KP+ C+ C ++FSQ S L  H ++  G  P   
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C+ C K F+   K  RH R H G KP   S
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 5e-10
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++C+ C ++F   SNL  H  IH G +P   +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ C+ C K F    +L  H  IH G K    +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++CN C   F   S+L  H  IH G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 4e-08
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C+ C ++F   + L  H  IHT  KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-07
 Identities = 14/42 (33%), Positives = 15/42 (35%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C  C K F    +L  H   H G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C ++F   SNL  H  +  G  P   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 14/42 (33%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C+ C K F        H   H G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 5e-10
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KPF+C  C + F   S    H R H G +P   +
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KPF C  C + F   +    H R H+  KP   S
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                +G KPF C  C K F        H + H G K    +
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PF+C  C   F   S    H R H+G KP   S
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K + C  C K F        H R+H G KP   S
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 10/42 (23%), Positives = 13/42 (30%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
                +  KP  C  C + F   S  Y H +   G  P    
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 14/42 (33%), Positives = 16/42 (38%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K F C  C K F    +   H R+H G KP   S
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 5e-10
 Identities = 16/43 (37%), Positives = 18/43 (41%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +    K   C  C   FT K+ LN H RIHT  KP   S
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 8e-10
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
               +    K  QC  C   FT +S+LN H RIH G +P   
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                   +  QC+ C   FT KS LN+H RIH G KP   S
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.6 bits (122), Expect = 8e-09
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 +  K   C  C + F+ K  LN+H +IH G K    +
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 8e-08
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                   +K + C  C + FT K  LN+H R H G KP   S
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 14/43 (32%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                    K   C  C + FT K   N+H R H G KP   S
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                +++K H C  C   F+ KS+L  H ++  G  P   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 54.1 bits (131), Expect = 6e-10
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               G KPF CS C ++F+ +S L +H + H   +P   +
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
             G KPF CS C ++F+ K+ L +H + H   KP   S
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
           S   +G KPF CS C K FS K  L  H + H   K    +
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 14/40 (35%), Positives = 19/40 (47%)

Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
               G +PF C+ C   F++KS L  H + H   KP   S
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 255 KIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
               G K + C+ C K F+ K  L  H + H   KP   S
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
              +  KP  CS C ++FS KS L +H +      P   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 14/40 (35%), Positives = 16/40 (40%)

Query: 143 KIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
               G K F CS C K F+ K     H + H   KP   S
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 6e-10
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
               +  G +  +CS C + F Q SN   H RIH G +P   +
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
               +  G +   CS C + F Q +    H RIHT  KP   S
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.1 bits (118), Expect = 3e-08
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G R  +C+ C   F   S+  +H RIH G KP   S
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 +G +   CS C K F +  +  +H +IH G K    +
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                  G + + C+ C K F +  +  +H R H G KP   S
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                   + H CS C + F Q SN   H ++  G  P   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 8e-06
 Identities = 14/43 (32%), Positives = 16/43 (37%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                  G +   CS C K F     F +H R H G KP   S
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 7e-10
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++C+ C + FTQ S+L  H  IH G +P   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 5e-09
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++CN C   FT  S L RH  IH G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 8e-09
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ C+ C K F++   L RH  IH G K    +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C+ C + FTQ + L  H  IHT  KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 16/42 (38%), Positives = 17/42 (40%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C  C K FT+   L RH   H G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C + F+Q S+L  H  +  G  P   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 14/42 (33%), Positives = 16/42 (38%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C+ C K FT      RH   H G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 7e-10
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++C+ C + FTQ S+L  H  IH G +P   +
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++CN C   FT  S L RH  IH G KP   S
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 8e-09
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ C+ C K F++   L RH  IH G K    +
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C+ C + FTQ + L  H  IHT  KP   S
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 16/42 (38%), Positives = 17/42 (40%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C  C K FT+   L RH   H G KP   S
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C + F+Q S+L  H  +  G  P   
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 14/42 (33%), Positives = 16/42 (38%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C+ C K FT      RH   H G KP   S
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 53.5 bits (129), Expect = 7e-10
 Identities = 16/33 (48%), Positives = 18/33 (54%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIH 257
            +R   GIKPF C  C + FSR D L  H K H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
             +   G K + C  C + F+R D L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 45.0 bits (107), Expect = 6e-07
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
             R   GIKPFQC  C  SF++  +L +H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIH 229
             R   GI+PFQC  C   F+    L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 38.9 bits (91), Expect = 9e-05
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLK 339
             R  T  KP  C  C  SFS+  +L +H K
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIH 313
             R   G+KPF C  C  SF++   L +H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 53.7 bits (130), Expect = 7e-10
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
              +  G KP+ C +C   F     L  HLRIH G  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 50.6 bits (122), Expect = 7e-09
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
              +  G KP+ C +C   F     L  HLRIHT S P +
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRY 263
            S    G KP+ C +C   F     L  H++IH GS   
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 12/39 (30%), Positives = 14/39 (35%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
                 G K Y C +C   F     L  H+R H G  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 42.5 bits (101), Expect = 6e-06
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
                 G +P+ C +C   F +   L  H RIH G  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.9 bits (97), Expect = 2e-05
 Identities = 10/39 (25%), Positives = 13/39 (33%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPF 179
                 G K + C +C   F        H+R H G  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 9/30 (30%), Positives = 10/30 (33%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHL 338
                   KP+ C IC   F     L  HL
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHL 31

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTH 426
           P+ C+IC   F     L++H++ H
Sbjct: 11  PYPCEICGTRFRHLQTLKSHLRIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.7 bits (130), Expect = 7e-10
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
              +  G KP++C  C   F Q ++L  H+ IH G  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
              +  G KP+ C  C   F Q A L  H+ IHT S P +
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.1 bits (118), Expect = 3e-08
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRY 263
            S    G KP+ C  C   F +   L  H+ IH GS   
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 11/39 (28%), Positives = 15/39 (38%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
                 G +P++C  C   F   + L  H  IH G  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 11/39 (28%), Positives = 13/39 (33%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
                 G K Y C  C   F +   L  H+  H G  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 9/39 (23%), Positives = 11/39 (28%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPF 179
                 G K + C  C   F        H+  H G  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 8/29 (27%), Positives = 11/29 (37%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIH 337
                   KP+ C  C   F Q ++L  H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAH 30

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTH 426
           P+KC+ C   F + ++LR H+  H
Sbjct: 11  PYKCETCGARFVQVAHLRAHVLIH 34

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.4 bits (129), Expect = 8e-10
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
              +  G KPFQC  C  +F+   +L  HLR H+   P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-08
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KPF C  C  +F+    L  HLR H  + P   S
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
                 G KPF C  C   FS    L +H++ HE +     
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.7 bits (109), Expect = 5e-07
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K + C  C   F+    L +H+R+H+   P   S
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.7 bits (109), Expect = 6e-07
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +PFQC  C + F+    L +H R H    P   S
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.6 bits (101), Expect = 6e-06
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K F C  C   F+      +H+R+HE   P   S
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 7e-05
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
                T  KP  C  C  +FS   +L+ HL+     +P    
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.3 bits (129), Expect = 9e-10
 Identities = 13/39 (33%), Positives = 24/39 (61%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
              +  G KP++C  C ++F+Q+ +L +H+R+H G  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 15/40 (37%), Positives = 24/40 (60%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
              +  G KP+ C  C ++F+QK  L +H+R+HT S P +
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.0 bits (123), Expect = 5e-09
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRY 263
            S    G KP+ C  C K FS+K  L  H+++H GS   
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
                 G +P++C+ C   F+ K  L  H R+H G  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.3 bits (108), Expect = 6e-07
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
                 G K Y C  C K F++K  L  H+R H G  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPF 347
                   KP+ C  C ++FSQK +L +H+++  G  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.9 bits (94), Expect = 4e-05
 Identities = 12/39 (30%), Positives = 15/39 (38%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPF 179
                 G K + C  C K F+ K     H+R H G  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.4 bits (129), Expect = 9e-10
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++C  C ++F   S+   H R+H G RP   +
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++C  C   F + S   +H R+H G +P   S
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 10/42 (23%), Positives = 16/42 (38%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ C  C K F       +H ++H G +    +
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.0 bits (115), Expect = 8e-08
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C  C ++F   +    H R+HT  +P   S
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C  C K F       +H R H G +P   S
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C  C ++F   S+   H +L  G  P   
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C  C K F D     +H R H G +P   S
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 9e-10
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G KP++C+ C + FTQ S+L  H R+H G +P   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +P++CN C   FT  S L RH R+H G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                 G KP+ C+ C K F++   L RH ++H G K    +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G KP+ C+ C + FTQ + L  H R+HT  KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 17/42 (40%), Positives = 18/42 (42%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K Y C  C K FT+   L RH R H G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T  KP+ C+ C + F+Q S+L  H ++  G  P   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K + C+ C K FT      RH R H G KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 53.1 bits (128), Expect = 1e-09
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
              +  G  P+ C  C +SFTQR +L +H R      P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 50.7 bits (122), Expect = 7e-09
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
              +  G  P+ C  C +SFTQ+  L +H R  + S P +
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
            S    G  P+LC  C K F+++  L  H +    S 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 10/39 (25%), Positives = 13/39 (33%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
                 G  P+ C  C   FT +  L  H R  +   P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 12/39 (30%), Positives = 15/39 (38%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
                 G   YLC  C K FT++  L  H R+     P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 10/39 (25%), Positives = 14/39 (35%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPF 179
                 G   +LC  C K+FT +     H R+     P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIH 337
                    P+ C  C +SF+Q+ +L +H
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVH 30

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 84  GDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENK 121
           G   S GGE  + C QC K+F  +  L  H +S S++ 
Sbjct: 1   GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 18/56 (32%), Positives = 30/56 (53%)

Query: 262 RYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSK 317
           +Y+C  C     +   L +H+R H  ++P+HC+ C  SF  K  L  H++   +SK
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 51.3 bits (122), Expect = 7e-09
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 153 CSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG 203
           C  C           +H+R H  ++P+ C+ C+ SF  + NL  H++    
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 50.1 bits (119), Expect = 2e-08
 Identities = 19/56 (33%), Positives = 28/56 (50%)

Query: 207 FQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKR 262
           + C  C I     S L +H R H  ++P+ C+ C   F  K +L +HMK    SK+
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 48.2 bits (114), Expect = 1e-07
 Identities = 16/55 (29%), Positives = 24/55 (43%)

Query: 179 FQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIK 233
           + C  C     + S L  H+R H  +RP+ C  C   F  K +L +H +     K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.0 bits (111), Expect = 3e-07
 Identities = 15/53 (28%), Positives = 24/53 (45%)

Query: 237 CSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLK 289
           C  C     +   L +H++ H   + Y CT C   F  K +L +HM++    K
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.9 bits (108), Expect = 6e-07
 Identities = 14/55 (25%), Positives = 25/55 (45%)

Query: 95  FTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVK 149
           + C +C         L +H+++H++ + + C  C F F  K    +HMK     K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.5 bits (107), Expect = 8e-07
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 56  KFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLK 115
           K+ C  C  R  + + L  H+RTH               + C+ C  +F  K +L +H+K
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHT----------DVRPYHCTYCNFSFKTKGNLTKHMK 50

Query: 116 SHSENK 121
           S + +K
Sbjct: 51  SKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.0 bits (98), Expect = 1e-05
 Identities = 17/53 (32%), Positives = 28/53 (52%)

Query: 291 FHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHG 343
           + C  C     + ++L  H+R HT+ +P+ C+ C  SF  K NL  H+K +  
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.0 bits (98), Expect = 1e-05
 Identities = 13/55 (23%), Positives = 26/55 (47%)

Query: 123 FRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIK 177
           + CE+C           +H++ H  V+ + C+ C+ +F  K    +HM++    K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.5 bits (94), Expect = 5e-05
 Identities = 18/51 (35%), Positives = 26/51 (50%)

Query: 376 FKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH 426
           + C  C     K S+LK+H+R   +V P+ C  C   F  K NL  H+K+ 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLR-IHDGIRPFQCN 210
              +  G KP++C  C ++F Q ++L  H R  H G +P   +
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHM-KIHEGSKRYLCT 266
                 G KP+ C  C K F +   L RH    H G K    +
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSR-IHNGIKPFLCS 238
                 G +P++C  C   F   + L RH R  H G KP   S
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLR-IHTNSKPHACS 322
              +  G KP+ C  C ++F Q   L  H R  HT  KP   S
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQH-GVNPFKC 349
                T  KP+ C  C ++F Q ++L  H +  H G  P   
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRN-HDGLKPFHCS 294
                 G K Y C  C K F +   L RH R  H G KP   S
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.5 bits (93), Expect = 7e-05
 Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRA-HEGIKPFQCS 182
                 G K + C  C K F       RH R  H G KP   S
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
              +  G  P++C  C + F+++  L  H + H G      
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 15/41 (36%), Positives = 16/41 (39%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
                 G  P+ C  C K FSRKD L  H K H G      
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.5 bits (114), Expect = 9e-08
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
              +  G  P+ C  C + F++K  L  H + H+     + 
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 10/41 (24%), Positives = 15/41 (36%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
                 G  P++C  C   F+ K  L  H + H+G      
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 13/41 (31%), Positives = 15/41 (36%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
                 G   Y C  C K F+RKD L  H + H G      
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T   P+ C  C + FS+K  L  H K   G +    
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 9/41 (21%), Positives = 13/41 (31%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
                 G   + C  C K F+ K +   H + H G      
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
               G  P++CS C ++F ++  L  H R H G      
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
           S   +G  P+ CS C K F+RKD L  H + H G      
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
               G  P+ CS C ++F +K  L  H R H      + 
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 11/39 (28%), Positives = 14/39 (35%)

Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
               G  P++C+ C   F  K  L  H R H G      
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 14/39 (35%), Positives = 15/39 (38%)

Query: 255 KIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
               G   Y C+ C K F RKD L  H R H G      
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.1 bits (100), Expect = 9e-06
 Identities = 9/39 (23%), Positives = 17/39 (43%)

Query: 311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
              +   P+ CS C ++F++K  L  H +   G +    
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.6 bits (114), Expect = 9e-08
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
              +  G K   C  C ++F   + L IH R+H   K    S
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
              +  G K   C  C ++F   S L IH R+H G +    +
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 11/42 (26%), Positives = 15/42 (35%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
                +G K   C  C K F     L  H ++H G K    +
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
                 G +   C+ C   F   S L  H R+H G K    S
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.6 bits (101), Expect = 6e-06
 Identities = 13/42 (30%), Positives = 14/42 (33%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
                 G K + C  C K F     L  H R H G K    S
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 10/42 (23%), Positives = 15/42 (35%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
                +  K H C  C ++F   S L IH ++  G       
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 12/42 (28%), Positives = 12/42 (28%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
                 G K   C  C K F        H R H G K    S
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 12/41 (29%), Positives = 15/41 (36%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
                   K + C+ C K F+R   L RH KIH        
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.9 bits (107), Expect = 9e-07
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
              +    K + C+ C ++FT+  +L  H +IH        
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.2 bits (100), Expect = 7e-06
 Identities = 13/41 (31%), Positives = 14/41 (34%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
                  SK Y C  C K FTR   L RH + H        
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.2 bits (100), Expect = 9e-06
 Identities = 10/41 (24%), Positives = 13/41 (31%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
                   + + CN C   FT    L RH +IH        
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
              +    K ++C+ C ++FT+   L  H +IHT     + 
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
                T+SK + C+ C ++F++  +L  H K+    +    
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
               G + ++C  C +SF Q+ +L +H RIH G  P 
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
               G + + C  C +SF QK  L +H RIHT S P +
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRY 263
           S   +G + + C  C K F +K  L  H +IH GS   
Sbjct: 2   SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 13/37 (35%), Positives = 15/37 (40%)

Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
               G R ++C  C   F  K  L  H RIH G  P 
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 13/35 (37%), Positives = 15/35 (42%)

Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
             G + Y C  C K F +K  L  H R H G  P 
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 46.8 bits (111), Expect = 2e-07
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG 203
               +  G  PF+CS C   FTQR+ L  H R H  
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.5 bits (105), Expect = 1e-06
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
                  G  PF CS C + F++++ L +H + H    
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKS 39

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.7 bits (103), Expect = 2e-06
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
               +  G  PF CS C   FTQ+  L  H R H      +
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS 42

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDG 287
                  G   + C+ C + FT+++ L +H R H  
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNG 231
                 G  PF+C+ C   FT ++ L +H R H  
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.1 bits (86), Expect = 5e-04
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRV 397
              +  G  PFKCS CD  F +++ L +H R 
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERT 34

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 48.4 bits (114), Expect = 2e-07
 Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 4/100 (4%)

Query: 366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKT 425
               V   + ++C +C+           H R+  N     C  C   F      + H   
Sbjct: 7   GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHESK 64

Query: 426 HE--PIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGL 463
            E   + C +C   F+    +  H  + HN +      G 
Sbjct: 65  CEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSGP 104

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 48.4 bits (114), Expect = 3e-07
 Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 4/86 (4%)

Query: 146 DGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIR 205
           +  +V+ C +C+   +  ++   H R         C  CS  F        H       +
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEH-ESKCEYK 68

Query: 206 PFQCNVCYICFTNKSDLNRH-SRIHN 230
              C  C   F +   + RH   +HN
Sbjct: 69  KLTCLECMRTFKSSFSIWRHQVEVHN 94

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 48.4 bits (114), Expect = 3e-07
 Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 3/87 (3%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRI 228
                E  + +QC +C+   +       H R+        C  C + F +      H   
Sbjct: 7   GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESK 64

Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMK 255
               K   C  C + F     + RH  
Sbjct: 65  CEY-KKLTCLECMRTFKSSFSIWRHQV 90

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.9 bits (105), Expect = 4e-06
 Identities = 14/84 (16%), Positives = 20/84 (23%), Gaps = 3/84 (3%)

Query: 86  EKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIH 145
                 +  + C  C            H +         C  C   F+       H    
Sbjct: 8   ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHESKC 65

Query: 146 DGVKVFLCSVCSKTFTDKVKFNRH 169
           +  K   C  C +TF       RH
Sbjct: 66  EYKK-LTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.7 bits (102), Expect = 1e-05
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 3/80 (3%)

Query: 230 NGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLK 289
              + + C +C    S   +   H ++       +C  C   F   +    H    +  K
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCEY-K 68

Query: 290 PFHCSVCFESFTQKALLNIH 309
              C  C  +F     +  H
Sbjct: 69  KLTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 42.2 bits (98), Expect = 4e-05
 Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 4/87 (4%)

Query: 286 DGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVN 345
           +  + + C +C    +       H R+  N+    C  C+  F        H + +    
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEH-ESKCEYK 68

Query: 346 PFKCDVCPNETFEKETQLSLHMRTVHG 372
              C  C   TF+    +  H   VH 
Sbjct: 69  KLTCLEC-MRTFKSSFSIWRHQVEVHN 94

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 42.2 bits (98), Expect = 4e-05
 Identities = 17/100 (17%), Positives = 29/100 (29%), Gaps = 13/100 (13%)

Query: 44  NDENSSGKKMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKT 103
               +S  +  + ++C +C  + +      +H R                +  C  C   
Sbjct: 4   GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN------------AAVCPYCSLR 51

Query: 104 FVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMK 143
           F        H +S  E K   C +C   F       RH  
Sbjct: 52  FFSPELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQV 90

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 45.3 bits (107), Expect = 8e-07
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVC 296
               K+  C +C K F     LNRH  +H G KP+     
Sbjct: 7   GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 16/42 (38%)

Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVC 212
            +    K   C +C + F    +LN H   H G +P+     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 14/42 (33%)

Query: 227 RIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMC 268
                 K   C +C K F     LNRH   H G K Y     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 43.8 bits (103), Expect = 2e-06
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCA 241
                 +   C +C   F +   LNRH   H+G KP+     +
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 42.6 bits (100), Expect = 7e-06
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 149 KVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCS 185
           K   C +C K F D    NRH  +H G KP+     S
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 42.6 bits (100), Expect = 7e-06
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICT 325
            +    K   C +C + F     LN H   H+  KP++    +
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.7 bits (95), Expect = 3e-05
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 94  SFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQC 128
              C  C K F D +HLNRH  SHS  K +     
Sbjct: 12  QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.3 bits (100), Expect = 7e-06
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
           S   +G KP+ C+ C + FS  + L +H K+H        
Sbjct: 2   SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
             G KP+ C+ C E+F+  + L  H ++H        
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.6 bits (93), Expect = 6e-05
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
             G KP+ C+ C E+F+    L  H ++HT     + 
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSK 261
           +PF+C+   C K F+R D+L RH + H G K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 261 KRYLCTM--CPKCFTRKDDLNRHMRNHDGLK 289
           + ++CT   C K FTR D+L RH R H G K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 30

 Score = 39.8 bits (93), Expect = 4e-05
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 233 KPFLCSMCAKCFSRKDDLNRHM-KIHEGS 260
           K + C +C + F+R+D L RH  KIH G+
Sbjct: 1   KAYACGLCNRAFTRRDLLIRHAQKIHSGN 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
           + F+C +C + F+R++ L RH + H   K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 21/32 (65%)

Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGS 260
            +G KP+ C +C   F RKD ++ H++ H+GS
Sbjct: 5   SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 41.8 bits (97), Expect = 7e-04
 Identities = 9/54 (16%), Positives = 16/54 (29%)

Query: 148 VKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
           +   +    S   +                 +QC VCS       +L+ H+  H
Sbjct: 150 MSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	617
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.87
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	99.83
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	99.76
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.75
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.74
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.74
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.73
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.73
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.72
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.71
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.7
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.68
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.67
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.66
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.64
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.63
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.63
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.62
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.6
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.6
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.6
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.6
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.57
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.55
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.53
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.53
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.5
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.48
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.48
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.47
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.46
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.46
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.45
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.45
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.44
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.44
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.42
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.42
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.41
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.4
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.39
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.38
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	99.37
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.37
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.36
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.36
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.36
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.36
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.35
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.34
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.33
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.31
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.3
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.29
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.29
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.27
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.25
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.24
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.23
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.23
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.23
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.18
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.17
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.16
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.03
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.02
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.02
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.02
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.02
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.01
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.99
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.99
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.98
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.96
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.95
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.92
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.91
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.91
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.91
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.9
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.89
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.89
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.88
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.88
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.88
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.87
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.85
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.85
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.85
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.85
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.84
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.83
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.83
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.81
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.8
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.79
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.79
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.79
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.79
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.78
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.76
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.74
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.73
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.72
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.72
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.7
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.68
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.65
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.63
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.51
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.48
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.47
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.45
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.45
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.39
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.39
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.36
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.33
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.33
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.32
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.29
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.17
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.15
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.14
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.13
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.99
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.98
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.95
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.94
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.91
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.91
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.89
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.87
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.87
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.87
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.86
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.86
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.85
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.84
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.83
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.82
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.81
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.8
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.8
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.8
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.78
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.77
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.77
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.76
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.76
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.76
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.75
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.74
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.74
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.73
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.9
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.9
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.71
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.7
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.87
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.69
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.68
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.85
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.64
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.8
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.75
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.56
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.26
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.25
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.13
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.89
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.7
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.05
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.97
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.91
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.67
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	95.35
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.08
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.72
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.45
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.93
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	92.79
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	92.58
3l07_A	285	Bifunctional protein fold; structural genomics, ID	92.49
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	92.1
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.38
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	90.8
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	90.67
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	90.28
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.85
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	89.44
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	88.45
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	86.75

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.8e-37  Score=288.52  Aligned_cols=183  Identities=40%  Similarity=0.775  Sum_probs=89.2

Q ss_pred             hhhhhhhhhcCCCcccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCcccccc
Q psy13389        221 DLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESF  300 (617)
Q Consensus       221 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f  300 (617)
                      .|..|+..|.++++|.|+.|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|
T Consensus         8 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   87 (190)
T 2i13_A            8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSF   87 (190)
T ss_dssp             -----------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             cchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCcc
Confidence            44455555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             CCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCCCCccCCCCCCCccCChhHHHHHhhhccCCCCcccCc
Q psy13389        301 TQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSM  380 (617)
Q Consensus       301 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~f~~~~~l~~H~~~h~~~~~~~C~~  380 (617)
                      .+...|..|+++|+++++|.|+.|++.|.+...|..|++.|+++++|.|++|++ .|.....|..|+++|+++++|.|++
T Consensus        88 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-~f~~~~~L~~H~~~H~~~~~~~C~~  166 (190)
T 2i13_A           88 SQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK-SFSREDNLHTHQRTHTGEKPYKCPE  166 (190)
T ss_dssp             SCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCC-EESCHHHHHHHHHHHHCCCCEECTT
T ss_pred             CCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCc-ccCCHHHHHHHHHhcCCCCCeECCC
Confidence            555555555555555555555555555555555555555555555555555555 5555555555555555556666666


Q ss_pred             cCCcCCCchhHHHHhhhhcCCCcc
Q psy13389        381 CDEGFPKKSVLKEHLRVSHNVNPF  404 (617)
Q Consensus       381 C~~~f~~~~~l~~H~~~h~~~~~~  404 (617)
                      |++.|.+...|..|+++|++++||
T Consensus       167 C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          167 CGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             TCCEESSHHHHHHHHTTC------
T ss_pred             CCCccCCHHHHHHHHHhcCCCCCC
Confidence            666666666666666666655554

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3.4e-37  Score=286.70  Aligned_cols=182  Identities=37%  Similarity=0.767  Sum_probs=79.9

Q ss_pred             HHHHHHHHccCCCCcccCcCccccCChHHHHHHHHhccCCCCcccCCCcccccCchhhhhhhhhhcCCCcccCCCCcccc
Q psy13389        165 KFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCF  244 (617)
Q Consensus       165 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f  244 (617)
                      .|..|++.|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|
T Consensus         8 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   87 (190)
T 2i13_A            8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSF   87 (190)
T ss_dssp             -----------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             cchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCcc
Confidence            34444444555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             CChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        245 SRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       245 ~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      .+...|..|++.|.++++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus        88 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  167 (190)
T 2i13_A           88 SQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPEC  167 (190)
T ss_dssp             SCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTT
T ss_pred             CCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCC
Confidence            55555555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             ccccCChhhHHHHHhhhcCCCC
Q psy13389        325 TESFSQKSNLYIHLKLQHGVNP  346 (617)
Q Consensus       325 ~~~f~~~~~l~~H~~~h~~~~~  346 (617)
                      ++.|.+...|..|+++|++++|
T Consensus       168 ~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          168 GKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             CCEESSHHHHHHHHTTC-----
T ss_pred             CCccCCHHHHHHHHHhcCCCCC
Confidence            5555555555555555555444

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=5e-31  Score=244.96  Aligned_cols=164  Identities=30%  Similarity=0.557  Sum_probs=117.2

Q ss_pred             CCCccc--CccccccCCHHHHHHHHHHhCCCCCccC--CccccccCChhhHHHHHhhhcCCCCccCC--CCCCCccCChh
Q psy13389        288 LKPFHC--SVCFESFTQKALLNIHLRIHTNSKPHAC--SICTESFSQKSNLYIHLKLQHGVNPFKCD--VCPNETFEKET  361 (617)
Q Consensus       288 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~~f~~~~  361 (617)
                      .++|.|  +.|++.|.+...|..|+++|+++++|.|  +.|++.|.+...|..|+++|+++++|.|+  .|++ .|....
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~-~f~~~~   88 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDL-RFTTKA   88 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCC-EESCHH
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCC-ccCCHH
Confidence            455666  4566666666666666666666666666  55666666666666666666666666666  5665 566666


Q ss_pred             HHHHHh-hhc-cCCCCccc--CccCCcCCCchhHHHHhhhhcCCCcccccc--ccccccChHhHHHHHHcCCCCCCcc--
Q psy13389        362 QLSLHM-RTV-HGVKPFKC--SMCDEGFPKKSVLKEHLRVSHNVNPFKCDI--CFKLFTKKSNLRTHIKTHEPIPCDK--  433 (617)
Q Consensus       362 ~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~C~~--  433 (617)
                      .|..|+ +.| .+.++|.|  +.|++.|.+...|..|+++|++++||.|++  |++.|.+...|..|+++|..|+|+.  
T Consensus        89 ~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~~~C~~~~  168 (190)
T 1tf6_A           89 NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD  168 (190)
T ss_dssp             HHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCSCCCCSTT
T ss_pred             HHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCCCcCCCCC
Confidence            666666 344 24567888  778888888888888888888888888877  8888888888888888888888888  


Q ss_pred             -ccccccCchhHHHHHhhhC
Q psy13389        434 -CPEIFEKKTDLQEHVDKCH  452 (617)
Q Consensus       434 -C~~~f~~~~~l~~H~~~~H  452 (617)
                       |++.|.+...|..|++..|
T Consensus       169 ~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          169 SCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             TCCCCCSCHHHHHHHHTTCC
T ss_pred             cCCCccccHHHHHHHHHhhc
Confidence             8888888888888888744

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=2e-30  Score=240.81  Aligned_cols=163  Identities=28%  Similarity=0.551  Sum_probs=76.6

Q ss_pred             CcccC--CCCccccCChhHHHHHHhhccCCCceec--CCCCCcCCCHHHHHHHHHhcCCCCCcccC--ccccccCCHHHH
Q psy13389        233 KPFLC--SMCAKCFSRKDDLNRHMKIHEGSKRYLC--TMCPKCFTRKDDLNRHMRNHDGLKPFHCS--VCFESFTQKALL  306 (617)
Q Consensus       233 ~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l  306 (617)
                      ++|.|  +.|++.|.+...|..|+++|.++++|.|  +.|++.|.+...|..|++.|.++++|.|+  .|++.|.+...|
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHH
Confidence            34444  3444444444444444444444444444  44444444444444444444444444444  444444444444


Q ss_pred             HHHH-HHh-CCCCCccC--CccccccCChhhHHHHHhhhcCCCCccCCC--CCCCccCChhHHHHHhhhccCCCCcccCc
Q psy13389        307 NIHL-RIH-TNSKPHAC--SICTESFSQKSNLYIHLKLQHGVNPFKCDV--CPNETFEKETQLSLHMRTVHGVKPFKCSM  380 (617)
Q Consensus       307 ~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~~f~~~~~l~~H~~~h~~~~~~~C~~  380 (617)
                      ..|+ +.| .++++|.|  +.|++.|.+...|..|+++|++++||.|++  |++ .|.....|..|+++|++   |.|..
T Consensus        91 ~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k-~F~~~~~L~~H~~~H~~---~~C~~  166 (190)
T 1tf6_A           91 KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDK-RFSLPSRLKRHEKVHAG---YPCKK  166 (190)
T ss_dssp             HHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCC-BCSSHHHHHHHHTSSCS---CCCCS
T ss_pred             HHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCc-hhcCHHHHHHHHHHhCC---CcCCC
Confidence            4444 233 23344444  444444444444444444444444444443  444 44444444444444443   44444


Q ss_pred             ---cCCcCCCchhHHHHhhhhc
Q psy13389        381 ---CDEGFPKKSVLKEHLRVSH  399 (617)
Q Consensus       381 ---C~~~f~~~~~l~~H~~~h~  399 (617)
                         |++.|.+...|..|+++|+
T Consensus       167 ~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          167 DDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             TTTCCCCCSCHHHHHHHHTTCC
T ss_pred             CCcCCCccccHHHHHHHHHhhc
Confidence               4444444444444444444

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=1.9e-26  Score=206.50  Aligned_cols=142  Identities=30%  Similarity=0.599  Sum_probs=90.5

Q ss_pred             ceecCCCCCcCCCHHHHHHHHH---hcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHH
Q psy13389        262 RYLCTMCPKCFTRKDDLNRHMR---NHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHL  338 (617)
Q Consensus       262 ~~~C~~C~~~f~~~~~L~~H~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  338 (617)
                      +|.|+.|++.|.+...|..|++   .|.+.++|.|++|+                       |+.|++.|.+...|..|+
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~-----------------------C~~c~~~f~~~~~l~~H~   59 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG-----------------------CSRELRPFKAQYMLVVHM   59 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT-----------------------CTTTTCCCSSHHHHHHHT
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC-----------------------ccchhhhhhhHHHHHHHH
Confidence            4555556666666556666655   45555555555442                       444456666666666666


Q ss_pred             hhhcCCCCccCCC--CCCCccCChhHHHHHhhhccCCCCcccCc--cCCcCCCchhHHHHh-hhhcCCCcccccc--ccc
Q psy13389        339 KLQHGVNPFKCDV--CPNETFEKETQLSLHMRTVHGVKPFKCSM--CDEGFPKKSVLKEHL-RVSHNVNPFKCDI--CFK  411 (617)
Q Consensus       339 ~~h~~~~~~~C~~--C~~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~  411 (617)
                      +.|+++++|.|++  |++ .|.....|..|+++|+++++|.|++  |++.|.+...|..|+ ++|.++++|.|++  |++
T Consensus        60 ~~h~~~~~~~C~~~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~  138 (155)
T 2gli_A           60 RRHTGEKPHKCTFEGCRK-SYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTK  138 (155)
T ss_dssp             HHHHCCCCCCCCSTTCCC-CCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCC
T ss_pred             HhcCCCCCccCCCCCCCC-cccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCcc
Confidence            6666666666654  666 5666666666666666666677766  777777777777776 5666667777766  777


Q ss_pred             cccChHhHHHHHHcCC
Q psy13389        412 LFTKKSNLRTHIKTHE  427 (617)
Q Consensus       412 ~f~~~~~l~~H~~~h~  427 (617)
                      .|.+...|..|+++|+
T Consensus       139 ~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          139 RYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             EESSHHHHHHHHHHSC
T ss_pred             ccCCHHHHHHHHHhhc
Confidence            7777777777766654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=2e-26  Score=206.34  Aligned_cols=107  Identities=36%  Similarity=0.712  Sum_probs=64.4

Q ss_pred             CCCCccccCChhHHHHHHhhccCCCceecCC--CCCcCCCHHHHHHHHHhcCCCCCcccCc--cccccCCHHHHHHHH-H
Q psy13389        237 CSMCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHL-R  311 (617)
Q Consensus       237 C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~  311 (617)
                      |..|++.|.+...|..|+++|.++++|.|++  |++.|.+...|..|++.|.++++|.|++  |++.|.+...|..|+ +
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  121 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR  121 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH
Confidence            3344455666666666666666556666653  6666666666666666666666666665  666666666666665 5


Q ss_pred             HhCCCCCccCCc--cccccCChhhHHHHHhhhcC
Q psy13389        312 IHTNSKPHACSI--CTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       312 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  343 (617)
                      +|.++++|.|++  |++.|.+...|..|+++|||
T Consensus       122 ~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             hcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            566666666655  66666666666666665553

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=1.1e-23  Score=181.45  Aligned_cols=93  Identities=26%  Similarity=0.481  Sum_probs=60.5

Q ss_pred             HhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhh
Q psy13389        254 MKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSN  333 (617)
Q Consensus       254 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  333 (617)
                      ..+|.|+++|.|++|++.|.+...|..|+++|.+++||+|++|++.|.+...|..|+++|++++||.|++|++.|.+...
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~   93 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQF   93 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHH
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHH
Confidence            34555666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHhhhcCCCC
Q psy13389        334 LYIHLKLQHGVNP  346 (617)
Q Consensus       334 l~~H~~~h~~~~~  346 (617)
                      |..|+++||+++|
T Consensus        94 L~~H~~~hh~~~p  106 (133)
T 2lt7_A           94 MSSHIKSVHSQDP  106 (133)
T ss_dssp             HHHHHHHHTCCCT
T ss_pred             HHHHhHHhcCCCC
Confidence            6666666666554

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=7.4e-23  Score=174.14  Aligned_cols=111  Identities=33%  Similarity=0.751  Sum_probs=77.0

Q ss_pred             CCCCccCCc--cccccCChhhHHHHHhhhcCCCCccCC--CCCCCccCChhHHHHHhhhccCCCCcccCccCCcCCCchh
Q psy13389        315 NSKPHACSI--CTESFSQKSNLYIHLKLQHGVNPFKCD--VCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSV  390 (617)
Q Consensus       315 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  390 (617)
                      ++++|.|++  |++.|.+...|..|++.|+++++|.|+  .|++ .|.....|..|+++|+++++|.|++|++.|.+...
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCER-RFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCC-EESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcC-ccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            455666665  666666666666666666666666666  4665 56666666666666666677777777777777777


Q ss_pred             HHHHhhhhcCCCcccc--ccccccccChHhHHHHHHcC
Q psy13389        391 LKEHLRVSHNVNPFKC--DICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       391 l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  426 (617)
                      |..|+++|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            7777777777777777  67777777777777777765

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=2.3e-22  Score=172.41  Aligned_cols=113  Identities=35%  Similarity=0.662  Sum_probs=81.7

Q ss_pred             CCCcccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHh---cCCCCCcccCccccccCCHHHHH
Q psy13389        231 GIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRN---HDGLKPFHCSVCFESFTQKALLN  307 (617)
Q Consensus       231 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~  307 (617)
                      +.++|.|+.|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.   +.+.++|.|++|++.|.+...|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            456677777777777777777777777777777777777777777777777764   45667777777777777777777


Q ss_pred             HHHHHhCCCCCccCCccccccCChhhHHHHHhhhcC
Q psy13389        308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       308 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  343 (617)
                      .|+++|++++||.|++|++.|.+...|..|++..|+
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            777777777777777777777777777777765443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=3.5e-23  Score=178.19  Aligned_cols=109  Identities=23%  Similarity=0.496  Sum_probs=93.5

Q ss_pred             hhhhhhhhcCCCcccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccC
Q psy13389        222 LNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFT  301 (617)
Q Consensus       222 L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~  301 (617)
                      +..|.++|.|+++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|.+++||.|++|++.|.
T Consensus        10 ~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~   89 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFI   89 (133)
T ss_dssp             SSEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEES
T ss_pred             HhhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcC
Confidence            44566778889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHhCCCCC------ccCCccccccCC
Q psy13389        302 QKALLNIHLRIHTNSKP------HACSICTESFSQ  330 (617)
Q Consensus       302 ~~~~l~~H~~~h~~~~~------~~C~~C~~~f~~  330 (617)
                      +...|..|+++|++++|      |+|..|++.|..
T Consensus        90 ~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           90 NYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             SHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             CHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            99999999999887755      555555555543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.87  E-value=1.8e-22  Score=173.03  Aligned_cols=115  Identities=31%  Similarity=0.662  Sum_probs=79.0

Q ss_pred             CCcccCC--CCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCc--cccccCCHHHHH
Q psy13389        232 IKPFLCS--MCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLN  307 (617)
Q Consensus       232 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~  307 (617)
                      +++|.|+  .|++.|.+...|..|+++| +.++|.|++|++.|.+...|..|++.|.++++|.|++  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            3567776  6777777777777777766 6667777777777777777777777777777777764  777777777777


Q ss_pred             HHHHHhCCCCCccCC--ccccccCChhhHHHHHhhhcCCCCc
Q psy13389        308 IHLRIHTNSKPHACS--ICTESFSQKSNLYIHLKLQHGVNPF  347 (617)
Q Consensus       308 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  347 (617)
                      .|+++|+++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            777777777777775  3777777777777777777766554

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.87  E-value=1.8e-22  Score=171.68  Aligned_cols=111  Identities=36%  Similarity=0.820  Sum_probs=74.6

Q ss_pred             CCCcccCCC--CccccCChhHHHHHHhhccCCCceecC--CCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHH
Q psy13389        231 GIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCT--MCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALL  306 (617)
Q Consensus       231 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l  306 (617)
                      ++++|.|.+  |++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|++.|+++++|.|+.|++.|.+...|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            455666665  666666666666666666666666666  5666666666666666666666666666666666666666


Q ss_pred             HHHHHHhCCCCCccC--CccccccCChhhHHHHHhhh
Q psy13389        307 NIHLRIHTNSKPHAC--SICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       307 ~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  341 (617)
                      ..|+++|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            666666666666666  56666666666666666654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=3.5e-22  Score=171.25  Aligned_cols=53  Identities=34%  Similarity=0.660  Sum_probs=26.9

Q ss_pred             CCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHh
Q psy13389        287 GLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLK  339 (617)
Q Consensus       287 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  339 (617)
                      +.++|+|+.|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|++
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   56 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEA   56 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHh
Confidence            34445555555555555555555555555555555555555555555555544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=2.4e-22  Score=179.62  Aligned_cols=88  Identities=33%  Similarity=0.646  Sum_probs=54.6

Q ss_pred             ccCCccccccCChhhHHHHHhhhcCCCCccCCC--CCCCccCChhHHHHHhhhccCCCCcccCc--cCCcCCCchhHHHH
Q psy13389        319 HACSICTESFSQKSNLYIHLKLQHGVNPFKCDV--CPNETFEKETQLSLHMRTVHGVKPFKCSM--CDEGFPKKSVLKEH  394 (617)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H  394 (617)
                      |.|+.|++.|.+...|..|++.|+++++|.|++  |++ .|.....|..|+++|+++++|.|.+  |++.|.+...|..|
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~-~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H  141 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK-IFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH  141 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCC-EESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCC-ccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHH
Confidence            556666666666666666666666666666655  655 5666666666666666666666665  66666666666666


Q ss_pred             hhhhcCCCccccc
Q psy13389        395 LRVSHNVNPFKCD  407 (617)
Q Consensus       395 ~~~h~~~~~~~C~  407 (617)
                      +++|++++||.|.
T Consensus       142 ~~~H~~~k~~~c~  154 (155)
T 2rpc_A          142 MHVHTSDKSGPSS  154 (155)
T ss_dssp             STTTTSCCCSCSC
T ss_pred             HHHhcCCCCCCCC
Confidence            6666666666653

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.87  E-value=2.1e-22  Score=172.63  Aligned_cols=114  Identities=26%  Similarity=0.621  Sum_probs=58.6

Q ss_pred             CCcccC--ccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCCCCccCCC--CCCCccCChhHHH
Q psy13389        289 KPFHCS--VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDV--CPNETFEKETQLS  364 (617)
Q Consensus       289 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~~f~~~~~l~  364 (617)
                      ++|.|+  .|++.|.+...|..|+++| ++++|.|+.|++.|.+...|..|++.|+++++|.|++  |++ .|.....|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~-~f~~~~~l~   81 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGK-RFSLDFNLR   81 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCC-EESCHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcC-ccCCHHHHH
Confidence            345554  4555555555555555554 4445555555555555555555555555555555543  554 455555555


Q ss_pred             HHhhhccCCCCcccC--ccCCcCCCchhHHHHhhhhcCCCcc
Q psy13389        365 LHMRTVHGVKPFKCS--MCDEGFPKKSVLKEHLRVSHNVNPF  404 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  404 (617)
                      .|+++|+++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            555555555555563  3666666666666666666655544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=2.7e-22  Score=179.35  Aligned_cols=118  Identities=30%  Similarity=0.510  Sum_probs=62.6

Q ss_pred             CCcccCCCCccccCChhHHHHHHhh-ccCCCc--------eecCCCCCcCCCHHHHHHHHHhcCCCCCcccCc--ccccc
Q psy13389        232 IKPFLCSMCAKCFSRKDDLNRHMKI-HEGSKR--------YLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESF  300 (617)
Q Consensus       232 ~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f  300 (617)
                      ..+|.|..|++.|.+...|..|++. |.+..+        |.|++|++.|.+...|..|++.|.++++|.|++  |++.|
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  102 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF  102 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEE
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCcc
Confidence            3445555555555555555555554 333322        455555555555555555555555555555554  55555


Q ss_pred             CCHHHHHHHHHHhCCCCCccCCc--cccccCChhhHHHHHhhhcCCCCccC
Q psy13389        301 TQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGVNPFKC  349 (617)
Q Consensus       301 ~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C  349 (617)
                      .+...|..|+++|+++++|.|++  |++.|.+...|..|+++|++++||.|
T Consensus       103 ~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A          103 ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             SCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             CCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            55555555555555555555554  55555555555555555555555554

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=99.83  E-value=4.8e-22  Score=196.28  Aligned_cols=112  Identities=28%  Similarity=0.399  Sum_probs=102.4

Q ss_pred             cccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCc-eEEEecchhhhcchhhhh
Q psy13389        504 VQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHS-SIFFDSEAAARGELKGLY  582 (617)
Q Consensus       504 ~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~-~~~~d~~~~~~~e~~~~~  582 (617)
                      +..+ +.++++.+||||++||++.+|++..+|++| |+||++||++.|+|+||+++++.++ .||||+++|++.|+|+++
T Consensus       172 ~~~~-~~~eav~~aDIVi~aT~s~~pvl~~~~l~~-G~~V~~vGs~~p~~~El~~~~~~~a~~v~vD~~~~~~~e~G~l~  249 (313)
T 3hdj_A          172 ARMA-APADIAAQADIVVTATRSTTPLFAGQALRA-GAFVGAIGSSLPHTRELDDEALRRARAVVVEWREQTLSEAGDLV  249 (313)
T ss_dssp             EEEC-CHHHHHHHCSEEEECCCCSSCSSCGGGCCT-TCEEEECCCSSTTCCCCCHHHHHHCSEEEESCHHHHHHHCHHHH
T ss_pred             EEEe-CHHHHHhhCCEEEEccCCCCcccCHHHcCC-CcEEEECCCCCCchhhcCHHHHhcCCEEEECCHHHHHhhccchh
Confidence            4455 889999999999999999999999999999 9999999999999999999999988 699999999999999998


Q ss_pred             hccc----cccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        583 EQVP----ANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       583 ~~~~----~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      ++.+    ++.+.+||||+.|+.+ |.++++|||||||||
T Consensus       250 ~~~~g~~~~~~i~elg~v~~g~~~gr~~~~~itvf~s~G~  289 (313)
T 3hdj_A          250 LAAPDTGLDAKVVELADVLAGRAAARQADEDIVIYKSVGV  289 (313)
T ss_dssp             HCCGGGCHHHHEEEHHHHHTTCCCCCCSTTCCEEEECCCC
T ss_pred             hhhcCCCchhhcccHHHHhcCCCCCCCCCCCEEEEECCCc
Confidence            8753    2345799999999987 999999999999997

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=99.76  E-value=3.7e-19  Score=178.50  Aligned_cols=112  Identities=21%  Similarity=0.322  Sum_probs=101.7

Q ss_pred             cccccccccccccccceeeeccCC--ccchhhhhcccCccccccccccccccccchhhhhcCceEEEecchhhhcchhhh
Q psy13389        504 VQAYEHGEDAARDADILVTATYSS--VPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGL  581 (617)
Q Consensus       504 ~~~~~~~~~~~~~adiv~~~t~s~--~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~d~~~~~~~e~~~~  581 (617)
                      +..+.+.++++.+||||++||++.  .|++..+|++| |+||++||++.|+++||+++++.++.+|||+++|++. .|++
T Consensus       182 ~~~~~~~~eav~~aDiVi~aTps~~~~pvl~~~~l~~-G~~V~~vgs~~p~~~El~~~~~~~a~v~vD~~~~~~~-~Gel  259 (350)
T 1x7d_A          182 IRRASSVAEAVKGVDIITTVTADKAYATIITPDMLEP-GMHLNAVGGDCPGKTELHADVLRNARVFVEYEPQTRI-EGEI  259 (350)
T ss_dssp             EEECSSHHHHHTTCSEEEECCCCSSEEEEECGGGCCT-TCEEEECSCCBTTBEEECHHHHHTSEEEESSHHHHHH-HSGG
T ss_pred             EEEeCCHHHHHhcCCEEEEeccCCCCCceecHHHcCC-CCEEEECCCCCCCceeeCHHHHhcCcEEECCHHHHhh-ccce
Confidence            455678889999999999999987  69999999999 9999999999999999999999999999999999875 5888


Q ss_pred             hhccccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        582 YEQVPANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       582 ~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      +...++.+++|||||+.|..+ |.++++|||||||||
T Consensus       260 ~~~~~~~~~~eLg~v~~g~~~gr~~~~~itvf~svG~  296 (350)
T 1x7d_A          260 QQLPADFPVVDLWRVLRGETEGRQSDSQVTVFDSVGF  296 (350)
T ss_dssp             GGSCTTCCCEEHHHHHTTSSCSCCCTTCCEEEECCCC
T ss_pred             ecCCccccccCHHHHhcCCCCCCCCCCCcEEEECCCc
Confidence            776666778899999999987 999999999999997

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.75  E-value=3.2e-18  Score=141.96  Aligned_cols=85  Identities=29%  Similarity=0.693  Sum_probs=35.2

Q ss_pred             ceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhh
Q psy13389        262 RYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       262 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  341 (617)
                      +|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|
T Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   96 (106)
T 2ee8_A           17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH   96 (106)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHT
T ss_pred             CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHh
Confidence            34444444444444444444444444444444444444444444444444444444444444444444444444444444


Q ss_pred             cCCCC
Q psy13389        342 HGVNP  346 (617)
Q Consensus       342 ~~~~~  346 (617)
                      +++++
T Consensus        97 ~~~~~  101 (106)
T 2ee8_A           97 MQTSS  101 (106)
T ss_dssp             TSCCC
T ss_pred             CCCCC
Confidence            44433

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=3.4e-18  Score=138.93  Aligned_cols=89  Identities=39%  Similarity=0.782  Sum_probs=63.8

Q ss_pred             cCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHH
Q psy13389        258 EGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH  337 (617)
Q Consensus       258 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  337 (617)
                      .++++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            45566777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HhhhcCCCC
Q psy13389        338 LKLQHGVNP  346 (617)
Q Consensus       338 ~~~h~~~~~  346 (617)
                      +++|+++++
T Consensus        84 ~~~h~~~~~   92 (96)
T 2dmd_A           84 LRSHTGDSG   92 (96)
T ss_dssp             HTTCCSCCC
T ss_pred             HHHhcCCCC
Confidence            777776543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.74  E-value=7.1e-18  Score=139.84  Aligned_cols=92  Identities=30%  Similarity=0.667  Sum_probs=79.2

Q ss_pred             cCCCcccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHH
Q psy13389        230 NGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH  309 (617)
Q Consensus       230 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  309 (617)
                      ..+++|.|.+|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            34677888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHhCCCCCccC
Q psy13389        310 LRIHTNSKPHAC  321 (617)
Q Consensus       310 ~~~h~~~~~~~C  321 (617)
                      +++|++++||.+
T Consensus        93 ~~~H~~~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQTSSPTA  104 (106)
T ss_dssp             HHHTTSCCCCCC
T ss_pred             HHHhCCCCCCcC
Confidence            888888888764

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=99.73  E-value=1.5e-18  Score=173.00  Aligned_cols=108  Identities=32%  Similarity=0.475  Sum_probs=97.4

Q ss_pred             ccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCceEEEecchhhhcchhhhhhcc-
Q psy13389        507 YEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQV-  585 (617)
Q Consensus       507 ~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~d~~~~~~~e~~~~~~~~-  585 (617)
                      +.+.++++ ++|||++||++..|++..+|++| |+||+.+|++.|+++||+++++.++.+|||+++|+ .++|+++.++ 
T Consensus       179 ~~~~~e~v-~aDvVi~aTp~~~pv~~~~~l~~-G~~V~~ig~~~p~~~el~~~~~~~a~v~vD~~~~~-~~~Gel~~~~~  255 (322)
T 1omo_A          179 VQPAEEAS-RCDVLVTTTPSRKPVVKAEWVEE-GTHINAIGADGPGKQELDVEILKKAKIVVDDLEQA-KHGGEINVAVS  255 (322)
T ss_dssp             ECCHHHHT-SSSEEEECCCCSSCCBCGGGCCT-TCEEEECSCCSTTCCCBCHHHHHTEEEEESCHHHH-HHHSTTHHHHH
T ss_pred             ECCHHHHh-CCCEEEEeeCCCCceecHHHcCC-CeEEEECCCCCCCccccCHHHHhcCeEEECCHHHh-hhcCcHHHHHH
Confidence            56788888 99999999999999999999999 99999999999999999999999999999999999 6678876552 


Q ss_pred             -----ccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        586 -----PANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       586 -----~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                           ++++.++||||+.|..+ |.++++||||||||+
T Consensus       256 ~g~~~~~~i~~elg~v~~g~~~gr~~~~~it~f~s~G~  293 (322)
T 1omo_A          256 KGVIGVEDVHATIGEVIAGLKDGRESDEEITIFDSTGL  293 (322)
T ss_dssp             TTSSCSTTEEEEHHHHHHTSSCCCCCSSCEEEEECCCC
T ss_pred             cCCCCHHhccccHHHHhcCCCCCCCCCCCeEEEECCCh
Confidence                 33456799999999987 999999999999997

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=9.1e-19  Score=147.63  Aligned_cols=102  Identities=23%  Similarity=0.302  Sum_probs=63.4

Q ss_pred             chhhhhhhhhhcCCCcccCCCCccccCChhHHHHHHhh--ccCCCcee-cCCCCCcC--CCHHHHHHHHHhcCCCCCccc
Q psy13389        219 KSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKI--HEGSKRYL-CTMCPKCF--TRKDDLNRHMRNHDGLKPFHC  293 (617)
Q Consensus       219 ~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~L~~H~~~h~~~~~~~C  293 (617)
                      ...|..|+++|++++||.|+.|++.|.+...|..|++.  |.+.+++. |++|++.|  .....|..|+++|.+++||.|
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            45566677777766777777777777777777777666  54444433 66666665  556666666666666666666


Q ss_pred             CccccccCCHHHHHHHHHHhCCCCCcc
Q psy13389        294 SVCFESFTQKALLNIHLRIHTNSKPHA  320 (617)
Q Consensus       294 ~~C~~~f~~~~~l~~H~~~h~~~~~~~  320 (617)
                      ++|++.|.+...|..|+++|+......
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~~~~~~  110 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKHYQKVS  110 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTTTTCSC
T ss_pred             CCCCCccCCHHHHHHHHHHhCCcccCC
Confidence            666666666666666666655544433

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.73  E-value=4e-18  Score=136.71  Aligned_cols=85  Identities=35%  Similarity=0.803  Sum_probs=52.8

Q ss_pred             CCceecC--CCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHH
Q psy13389        260 SKRYLCT--MCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH  337 (617)
Q Consensus       260 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  337 (617)
                      +++|.|+  .|++.|.+...|..|++.|.+.++|.|+.|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            3456665  36666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             HhhhcCC
Q psy13389        338 LKLQHGV  344 (617)
Q Consensus       338 ~~~h~~~  344 (617)
                      +++|+++
T Consensus        82 ~~~H~~~   88 (90)
T 1a1h_A           82 TKIHLRQ   88 (90)
T ss_dssp             HGGGGC-
T ss_pred             HHHhccc
Confidence            6666554

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=2.8e-19  Score=150.82  Aligned_cols=100  Identities=17%  Similarity=0.226  Sum_probs=63.5

Q ss_pred             hHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHh--cCCCCCcc-cCcccccc--CCHHHHHHHHHHhCCCCCccCC
Q psy13389        248 DDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRN--HDGLKPFH-CSVCFESF--TQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       248 ~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      ..|..|+++|.++++|.|++|++.|.+...|..|++.  |.+.+++. |+.|++.|  .....|..|+++|++++||.|+
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            3455666666666666666666666666666666666  55555443 66666666  6666666666666666666666


Q ss_pred             ccccccCChhhHHHHHhhhcCCCCc
Q psy13389        323 ICTESFSQKSNLYIHLKLQHGVNPF  347 (617)
Q Consensus       323 ~C~~~f~~~~~l~~H~~~h~~~~~~  347 (617)
                      +|++.|.+...|..|++.|+.....
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh~~~~~  109 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTKHYQKV  109 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTTTTTCS
T ss_pred             CCCCccCCHHHHHHHHHHhCCcccC
Confidence            6666666666666666666655443

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1e-17  Score=136.05  Aligned_cols=89  Identities=38%  Similarity=0.788  Sum_probs=67.2

Q ss_pred             cCCCcccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHH
Q psy13389        230 NGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH  309 (617)
Q Consensus       230 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  309 (617)
                      .++++|.|.+|++.|.+...|..|++.|.+.++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            45667777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHhCCCCC
Q psy13389        310 LRIHTNSKP  318 (617)
Q Consensus       310 ~~~h~~~~~  318 (617)
                      +++|+++++
T Consensus        84 ~~~h~~~~~   92 (96)
T 2dmd_A           84 LRSHTGDSG   92 (96)
T ss_dssp             HTTCCSCCC
T ss_pred             HHHhcCCCC
Confidence            777777654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.72  E-value=5.7e-18  Score=133.16  Aligned_cols=81  Identities=37%  Similarity=0.750  Sum_probs=48.8

Q ss_pred             ceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhh
Q psy13389        262 RYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       262 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  341 (617)
                      ||.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            35556666666666666666665555556666666666666666666666666666666666666666666666666555


Q ss_pred             c
Q psy13389        342 H  342 (617)
Q Consensus       342 ~  342 (617)
                      +
T Consensus        81 ~   81 (82)
T 2kmk_A           81 T   81 (82)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=6.8e-18  Score=140.14  Aligned_cols=93  Identities=15%  Similarity=0.313  Sum_probs=51.9

Q ss_pred             hhhhcCCCcccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHH
Q psy13389        226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKAL  305 (617)
Q Consensus       226 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~  305 (617)
                      ++.|.++++|.|.+|++.|.+...|..|+++|.  ++|.|++|++.|.+...|..|++ |.++++|+|++|++.|.+...
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHH
Confidence            344555555666666666655555555555552  45555555555555555555553 555555555555555555555


Q ss_pred             HHHHHH-HhCCCCCccC
Q psy13389        306 LNIHLR-IHTNSKPHAC  321 (617)
Q Consensus       306 l~~H~~-~h~~~~~~~C  321 (617)
                      |..|++ +|.++++|.|
T Consensus        85 L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHHcCCCCCCCC
Confidence            555554 5555555544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=4.4e-18  Score=141.29  Aligned_cols=95  Identities=18%  Similarity=0.275  Sum_probs=81.4

Q ss_pred             HHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChh
Q psy13389        253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKS  332 (617)
Q Consensus       253 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  332 (617)
                      ++++|.++++|.|++|++.|.+...|..|++.|  .++|.|++|++.|.+...|..|++ |++++||.|++|++.|.+..
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHH
Confidence            456678888899999999999999999999888  368999999999999999999985 88888999999999999999


Q ss_pred             hHHHHHh-hhcCCCCccCC
Q psy13389        333 NLYIHLK-LQHGVNPFKCD  350 (617)
Q Consensus       333 ~l~~H~~-~h~~~~~~~C~  350 (617)
                      .|..|++ .|.++++|.|.
T Consensus        84 ~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           84 SIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHcCCCCCCCCC
Confidence            9999987 77788888764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.71  E-value=1.1e-17  Score=134.16  Aligned_cols=86  Identities=37%  Similarity=0.848  Sum_probs=63.5

Q ss_pred             CCcccCC--CCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHH
Q psy13389        232 IKPFLCS--MCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH  309 (617)
Q Consensus       232 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  309 (617)
                      ++||.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            4667776  47777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHhCCCC
Q psy13389        310 LRIHTNSK  317 (617)
Q Consensus       310 ~~~h~~~~  317 (617)
                      +++|++++
T Consensus        82 ~~~H~~~k   89 (90)
T 1a1h_A           82 TKIHLRQK   89 (90)
T ss_dssp             HGGGGC--
T ss_pred             HHHhcccC
Confidence            77777654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.70  E-value=1.7e-17  Score=130.33  Aligned_cols=82  Identities=39%  Similarity=0.774  Sum_probs=63.0

Q ss_pred             cccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHh
Q psy13389        234 PFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIH  313 (617)
Q Consensus       234 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  313 (617)
                      ||.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            46777777777777777777777777777777777777777777777777777777777877888887777787777777


Q ss_pred             CC
Q psy13389        314 TN  315 (617)
Q Consensus       314 ~~  315 (617)
                      ++
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            54

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=4.9e-17  Score=131.77  Aligned_cols=81  Identities=40%  Similarity=0.730  Sum_probs=52.3

Q ss_pred             CCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCC--CCccCCccccccCChhhHHH
Q psy13389        259 GSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNS--KPHACSICTESFSQKSNLYI  336 (617)
Q Consensus       259 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~  336 (617)
                      ++++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|+++  ++|.|++|++.|.+...|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            4556666666666666666666666666666666666666666666666666666655  66666666666666666666


Q ss_pred             HHh
Q psy13389        337 HLK  339 (617)
Q Consensus       337 H~~  339 (617)
                      |++
T Consensus        84 H~~   86 (95)
T 2yt9_A           84 HIK   86 (95)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            665

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.6e-17  Score=136.54  Aligned_cols=86  Identities=38%  Similarity=0.717  Sum_probs=55.3

Q ss_pred             ccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHH
Q psy13389        257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYI  336 (617)
Q Consensus       257 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  336 (617)
                      |.++++|.| .|++.|.+...|..|++.|.+.++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.....|..
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHH
Confidence            455566666 5666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             HHhhhcC
Q psy13389        337 HLKLQHG  343 (617)
Q Consensus       337 H~~~h~~  343 (617)
                      |++.|+.
T Consensus        84 H~~~~~~   90 (110)
T 2csh_A           84 HVTSCTK   90 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHccc
Confidence            6666553

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.3e-16  Score=129.32  Aligned_cols=86  Identities=38%  Similarity=0.780  Sum_probs=61.8

Q ss_pred             CCCcccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCC--CCcccCccccccCCHHHHHH
Q psy13389        231 GIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGL--KPFHCSVCFESFTQKALLNI  308 (617)
Q Consensus       231 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~  308 (617)
                      ++++|.|.+|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.|++.  ++|.|++|++.|.+...|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            4566777777777777777777777777777777777777777777777777777765  67777777777777777777


Q ss_pred             HHH-HhCCC
Q psy13389        309 HLR-IHTNS  316 (617)
Q Consensus       309 H~~-~h~~~  316 (617)
                      |++ +|.++
T Consensus        84 H~~~~H~~~   92 (95)
T 2yt9_A           84 HIKQVHSGP   92 (95)
T ss_dssp             HHHHTSCCC
T ss_pred             HHHHhcCCC
Confidence            775 55543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.2e-16  Score=133.32  Aligned_cols=87  Identities=34%  Similarity=0.710  Sum_probs=69.0

Q ss_pred             hhcCCCcccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHH
Q psy13389        228 IHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLN  307 (617)
Q Consensus       228 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  307 (617)
                      .|+++++|.| .|++.|.+...|..|++.|.+.++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.+...|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            4567777888 788888888888888888877778888888888888888888888888888888888888888888888


Q ss_pred             HHHHHhCC
Q psy13389        308 IHLRIHTN  315 (617)
Q Consensus       308 ~H~~~h~~  315 (617)
                      .|+++|+.
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            88877653

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.64  E-value=1.2e-17  Score=133.08  Aligned_cols=81  Identities=31%  Similarity=0.679  Sum_probs=69.1

Q ss_pred             CCCcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHHHHHHcCC--CCCCccccccccCchhHHHHHhh
Q psy13389        373 VKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHE--PIPCDKCPEIFEKKTDLQEHVDK  450 (617)
Q Consensus       373 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~C~~C~~~f~~~~~l~~H~~~  450 (617)
                      ++||.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|+  +|.|+.|++.|.+...|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHH
Confidence            4678888888888888888888888888888888888888888888888888886  68888888888888888888888


Q ss_pred             hCC
Q psy13389        451 CHN  453 (617)
Q Consensus       451 ~H~  453 (617)
                      .|.
T Consensus        81 ~h~   83 (88)
T 1llm_C           81 LKK   83 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            775

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.63  E-value=6.9e-16  Score=126.23  Aligned_cols=82  Identities=35%  Similarity=0.766  Sum_probs=50.4

Q ss_pred             CceecCC--CCCcCCCHHHHHHHHHhcCCCCCcccC--ccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHH
Q psy13389        261 KRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCS--VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYI  336 (617)
Q Consensus       261 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  336 (617)
                      ++|.|.+  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+...|..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   93 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL   93 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHH
Confidence            4556654  666666666666666666666666664  366666666666666666666666666666666666666666


Q ss_pred             HHhhhc
Q psy13389        337 HLKLQH  342 (617)
Q Consensus       337 H~~~h~  342 (617)
                      |+++|+
T Consensus        94 H~~~H~   99 (100)
T 2ebt_A           94 HMKRHQ   99 (100)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            666554

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.63  E-value=2.5e-16  Score=113.75  Aligned_cols=57  Identities=28%  Similarity=0.648  Sum_probs=36.1

Q ss_pred             CCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCC
Q psy13389        288 LKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGV  344 (617)
Q Consensus       288 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  344 (617)
                      ++||+|++|++.|.+...|..|+++|++++||.|++||++|...++|..|+++|.|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            456666666666666666666666666666666666666666666666666666554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.62  E-value=4.8e-16  Score=124.14  Aligned_cols=82  Identities=34%  Similarity=0.730  Sum_probs=58.7

Q ss_pred             CCceecCC--CCCcCCCHHHHHHHHHhcCCCCCcccC--ccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHH
Q psy13389        260 SKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCS--VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLY  335 (617)
Q Consensus       260 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  335 (617)
                      ..+|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|+++++|.|+.|++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            34567776  777777777777777777777777775  47777777777777777777777777777777777777777


Q ss_pred             HHHhhh
Q psy13389        336 IHLKLQ  341 (617)
Q Consensus       336 ~H~~~h  341 (617)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            777665

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.60  E-value=7.1e-16  Score=123.15  Aligned_cols=81  Identities=33%  Similarity=0.739  Sum_probs=49.4

Q ss_pred             CCccCCC--CCCCccCChhHHHHHhhhccCCCCcccC--ccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHH
Q psy13389        345 NPFKCDV--CPNETFEKETQLSLHMRTVHGVKPFKCS--MCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLR  420 (617)
Q Consensus       345 ~~~~C~~--C~~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  420 (617)
                      .+|.|++  |++ .|.....|..|+++|+++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+...|.
T Consensus         4 ~~~~C~~~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            4 ATHTCDYAGCGK-TYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCEECCSTTTCC-EESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCeeCCCCCCCC-cCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            3455555  555 455555555555555555566664  36666666666666666666666666666666666666666


Q ss_pred             HHHHcC
Q psy13389        421 THIKTH  426 (617)
Q Consensus       421 ~H~~~h  426 (617)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            666655

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.60  E-value=1.9e-15  Score=123.59  Aligned_cols=84  Identities=39%  Similarity=0.860  Sum_probs=69.7

Q ss_pred             CCcccCCC--CccccCChhHHHHHHhhccCCCceecC--CCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHH
Q psy13389        232 IKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCT--MCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLN  307 (617)
Q Consensus       232 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  307 (617)
                      .++|.|..  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++.|.++++|.|++|++.|.+...|.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            45688886  888888888888888888888888886  58888888888888888888888888888888888888888


Q ss_pred             HHHHHhCC
Q psy13389        308 IHLRIHTN  315 (617)
Q Consensus       308 ~H~~~h~~  315 (617)
                      .|+++|++
T Consensus        93 ~H~~~H~~  100 (100)
T 2ebt_A           93 LHMKRHQN  100 (100)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            88888864

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.60  E-value=5.6e-16  Score=111.95  Aligned_cols=57  Identities=32%  Similarity=0.748  Sum_probs=36.5

Q ss_pred             CCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCC
Q psy13389        260 SKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNS  316 (617)
Q Consensus       260 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  316 (617)
                      ++||.|++|++.|.+...|..|+++|.+++||.|++||+.|.+...|..|+++|+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            456666666666666666666666666666666666666666666666666666654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.60  E-value=8.1e-17  Score=128.31  Aligned_cols=81  Identities=28%  Similarity=0.513  Sum_probs=52.7

Q ss_pred             CceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhh
Q psy13389        261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKL  340 (617)
Q Consensus       261 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  340 (617)
                      ++|.|++|++.|.+...|..|++.|.+++||.|+.|++.|.+...|..|+++|++ .+|.|+.|++.|.+...|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            4566666666666666666666666666666666666666666666666666653 566666666666666666666665


Q ss_pred             hc
Q psy13389        341 QH  342 (617)
Q Consensus       341 h~  342 (617)
                      +|
T Consensus        81 ~h   82 (88)
T 1llm_C           81 LK   82 (88)
T ss_dssp             HH
T ss_pred             HH
Confidence            55

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.57  E-value=1e-15  Score=121.07  Aligned_cols=76  Identities=32%  Similarity=0.549  Sum_probs=49.6

Q ss_pred             Cccc--CccCCcCCCchhHHHHhhhhcCCCcccccc--ccccccChHhHHHHHHcCCCCCCcc---ccccccCchhHHHH
Q psy13389        375 PFKC--SMCDEGFPKKSVLKEHLRVSHNVNPFKCDI--CFKLFTKKSNLRTHIKTHEPIPCDK---CPEIFEKKTDLQEH  447 (617)
Q Consensus       375 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~C~~---C~~~f~~~~~l~~H  447 (617)
                      ||.|  +.|++.|.+...|..|+++|+++++|.|++  |++.|.+...|..|+++|..|.|+.   |++.|.+...|..|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~C~~~~~C~~~f~~~~~l~~H   80 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH   80 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHSEECCSCSSCCCEESSHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCCCCCCCCCCccCCHHHHHHH
Confidence            4566  666666666666666666666666666666  6666666666666666665566666   66666666666666


Q ss_pred             Hhh
Q psy13389        448 VDK  450 (617)
Q Consensus       448 ~~~  450 (617)
                      ++.
T Consensus        81 ~~~   83 (85)
T 2j7j_A           81 VAE   83 (85)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            665

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=3.6e-15  Score=117.83  Aligned_cols=78  Identities=24%  Similarity=0.502  Sum_probs=48.0

Q ss_pred             ceec--CCCCCcCCCHHHHHHHHHhcCCCCCcccCc--cccccCCHHHHHHHHHHhCCCCCccCCc---cccccCChhhH
Q psy13389        262 RYLC--TMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSI---CTESFSQKSNL  334 (617)
Q Consensus       262 ~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  334 (617)
                      ||.|  +.|++.|.+...|..|++.|.++++|.|+.  |++.|.+...|..|+++|++   |.|+.   |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            3556  556666666666666666666666666655  66666666666666666655   66666   66666666666


Q ss_pred             HHHHhhhc
Q psy13389        335 YIHLKLQH  342 (617)
Q Consensus       335 ~~H~~~h~  342 (617)
                      ..|+++||
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            66665553

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=3.1e-15  Score=118.47  Aligned_cols=34  Identities=18%  Similarity=0.407  Sum_probs=12.9

Q ss_pred             ccCCccccccCChhhHHHHHhhhcCCCCccCCCC
Q psy13389        319 HACSICTESFSQKSNLYIHLKLQHGVNPFKCDVC  352 (617)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  352 (617)
                      |.|+.|++.|.....|..|+++|++++++.|..|
T Consensus        48 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A           48 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             eECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            3333333333333333333333333333333333

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=9.1e-15  Score=113.69  Aligned_cols=69  Identities=29%  Similarity=0.588  Sum_probs=34.5

Q ss_pred             CCceecCC--CCCcCCCHHHHHHHHH-hcCCCCCcccCc--cccccCCHHHHHHHHHHhCCCCCccCCcccccc
Q psy13389        260 SKRYLCTM--CPKCFTRKDDLNRHMR-NHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESF  328 (617)
Q Consensus       260 ~~~~~C~~--C~~~f~~~~~L~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  328 (617)
                      +++|.|..  |++.|.+...|..|++ .|.++++|.|+.  |++.|.+...|..|+++|++++||.|++|++.|
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            34444443  5555555555555554 344455555544  555555555555555555555555555555444

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=8.6e-15  Score=115.93  Aligned_cols=77  Identities=31%  Similarity=0.570  Sum_probs=35.6

Q ss_pred             hhhhhhhhcCCCcccCCCCccccCChhHHHHHHhhccCC----CceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccc
Q psy13389        222 LNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGS----KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCF  297 (617)
Q Consensus       222 L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~----~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~  297 (617)
                      |..|+++|.++++|.|.+|++.|.+...|..|++.|+..    ++|.|++|++.|.+...|..|++.|++++++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            344444555445555555555555444444444444332    3444444444444444444444444444444444444


Q ss_pred             c
Q psy13389        298 E  298 (617)
Q Consensus       298 ~  298 (617)
                      .
T Consensus        83 ~   83 (86)
T 1x6h_A           83 P   83 (86)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.2e-14  Score=111.44  Aligned_cols=71  Identities=27%  Similarity=0.549  Sum_probs=53.9

Q ss_pred             CCCCCcccCc--cccccCCHHHHHHHHH-HhCCCCCccCCc--cccccCChhhHHHHHhhhcCCCCccCCCCCCCcc
Q psy13389        286 DGLKPFHCSV--CFESFTQKALLNIHLR-IHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETF  357 (617)
Q Consensus       286 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~f  357 (617)
                      +++++|.|..  |++.|.+...|..|++ +|.++++|.|+.  |++.|.+...|..|+++|++++||.|++|++ .|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k-~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP-SS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSC-CC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCC-CC
Confidence            4567777776  8888888888888877 577777788877  7777777777777777777777777777776 44

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.48  E-value=1.8e-15  Score=130.18  Aligned_cols=68  Identities=21%  Similarity=0.545  Sum_probs=40.0

Q ss_pred             CHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCC
Q psy13389        274 RKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGV  344 (617)
Q Consensus       274 ~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  344 (617)
                      ....|..|+ .|++++||.|++|++.|.+...|..|+++|  ++||.|+.|++.|.....|..|++.|++.
T Consensus        59 ~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           59 ESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             THHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            444455554 355556666666666666666666666665  55666666666666666666666666553

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=3.8e-14  Score=109.48  Aligned_cols=64  Identities=31%  Similarity=0.584  Sum_probs=33.5

Q ss_pred             CCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCCCCccC
Q psy13389        286 DGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC  349 (617)
Q Consensus       286 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  349 (617)
                      .++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.....|..|+++|++++||+|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3444555555555555555555555555555555555555555555555555555555555544

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=9.5e-15  Score=118.67  Aligned_cols=77  Identities=17%  Similarity=0.258  Sum_probs=49.0

Q ss_pred             CCCHHHHHHHHHhcCCCCCcccCccccccC-CHHHHHHHHHHhCC-CCCccCCccccccCChhhHHHHHhhhcCCCCcc
Q psy13389        272 FTRKDDLNRHMRNHDGLKPFHCSVCFESFT-QKALLNIHLRIHTN-SKPHACSICTESFSQKSNLYIHLKLQHGVNPFK  348 (617)
Q Consensus       272 f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  348 (617)
                      +.....+..|++.|.++++|.|++|++.|. +...|..|+++|++ +++|.|++|++.|.....|..|+++|++++|..
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            333444556666666666666666666666 66666666666666 666666666666666666666666666666543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.46  E-value=8.8e-15  Score=125.77  Aligned_cols=80  Identities=19%  Similarity=0.353  Sum_probs=60.7

Q ss_pred             cccCCCCcccc------CChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHH
Q psy13389        234 PFLCSMCAKCF------SRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLN  307 (617)
Q Consensus       234 ~~~C~~C~~~f------~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  307 (617)
                      ++.|++|.+.|      .....|..|+ .|+++++|.|++|++.|.....|..|+++|  ++||.|+.|++.|.+...|.
T Consensus        41 ~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~  117 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSAL  117 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHH
T ss_pred             cccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHH
Confidence            34455444433      3555666666 577788888888888888888888888887  77888888888888888888


Q ss_pred             HHHHHhCCC
Q psy13389        308 IHLRIHTNS  316 (617)
Q Consensus       308 ~H~~~h~~~  316 (617)
                      .|+++|++.
T Consensus       118 ~H~~~h~~~  126 (129)
T 2wbt_A          118 DHVCKKHNI  126 (129)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHHCCc
Confidence            888888764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=5.5e-14  Score=108.56  Aligned_cols=63  Identities=40%  Similarity=0.780  Sum_probs=31.7

Q ss_pred             CCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        259 GSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       259 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      ++++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.....|..|+++|++++||+|
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344445555555555555555555555545555555555555555555555555555555544

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=2.9e-14  Score=115.79  Aligned_cols=71  Identities=21%  Similarity=0.347  Sum_probs=35.3

Q ss_pred             HHHHHHhhccCCCceecCCCCCcCC-CHHHHHHHHHhcCC-CCCcccCccccccCCHHHHHHHHHHhCCCCCc
Q psy13389        249 DLNRHMKIHEGSKRYLCTMCPKCFT-RKDDLNRHMRNHDG-LKPFHCSVCFESFTQKALLNIHLRIHTNSKPH  319 (617)
Q Consensus       249 ~L~~H~~~h~~~~~~~C~~C~~~f~-~~~~L~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  319 (617)
                      .+..|+++|.++++|.|++|++.|. +...|..|++.|++ +++|.|++|++.|.+...|..|+++|++++|+
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            3344444444444455555555554 44455555554444 44555555555555555555555555554443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1e-13  Score=111.66  Aligned_cols=69  Identities=10%  Similarity=0.171  Sum_probs=33.0

Q ss_pred             CCCHHHHHHHHHhcCCCCCcccCcccccc-CCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHH-Hhhh
Q psy13389        272 FTRKDDLNRHMRNHDGLKPFHCSVCFESF-TQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH-LKLQ  341 (617)
Q Consensus       272 f~~~~~L~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h  341 (617)
                      |.....|..|++.|.++++|.|+.|++.| .+...|..|+++| +++||.|.+|++.|.....|..| +++|
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           16 YAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             SCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence            33444444444444444444444444444 4444444444444 44444444444444444444444 4433

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.44  E-value=1.4e-13  Score=105.29  Aligned_cols=61  Identities=36%  Similarity=0.723  Sum_probs=32.4

Q ss_pred             CCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCCCC
Q psy13389        286 DGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP  346 (617)
Q Consensus       286 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  346 (617)
                      .++++|+|+.|++.|.+...|..|+++|+++++|+|++|++.|.....|..|+++|++++|
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            3445555555555555555555555555555555555555555555555555555555444

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.8e-13  Score=110.09  Aligned_cols=77  Identities=16%  Similarity=0.233  Sum_probs=56.0

Q ss_pred             cccCChhHHHHHHhhccCCCceecCCCCCcC-CCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHH-HHHhCCCCCc
Q psy13389        242 KCFSRKDDLNRHMKIHEGSKRYLCTMCPKCF-TRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH-LRIHTNSKPH  319 (617)
Q Consensus       242 ~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~  319 (617)
                      ..|.....|..|++.|.++++|.|+.|++.| .+...|..|+++| ++++|.|.+|++.|.+...|..| +++|++...|
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            3455666677777777777777777777777 7777777777777 77777777777777777777777 6777654433

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.42  E-value=2.4e-13  Score=104.05  Aligned_cols=63  Identities=37%  Similarity=0.722  Sum_probs=44.6

Q ss_pred             ccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCc
Q psy13389        257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPH  319 (617)
Q Consensus       257 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  319 (617)
                      +.++++|.|+.|++.|.+...|..|++.|.++++|+|++|++.|.+...|..|+++|++++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            445666777777777777777777777777777777777777777777777777777776665

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=9.4e-14  Score=112.29  Aligned_cols=66  Identities=20%  Similarity=0.312  Sum_probs=30.7

Q ss_pred             CCCCcccCccccccCCHHHHHHHHH-Hh---CCCCCccCCccccccCChhhHHHH-HhhhcCCCCccCCCC
Q psy13389        287 GLKPFHCSVCFESFTQKALLNIHLR-IH---TNSKPHACSICTESFSQKSNLYIH-LKLQHGVNPFKCDVC  352 (617)
Q Consensus       287 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C  352 (617)
                      +++||.|+.|++.|.++..|..|++ +|   .+++||.|+.|++.|.....|..| +++|.+++||.|.++
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            3444444444444444444444443 24   234444444444444444444444 444444444444443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=9.6e-14  Score=112.25  Aligned_cols=69  Identities=16%  Similarity=0.246  Sum_probs=57.8

Q ss_pred             ccCCCceecCCCCCcCCCHHHHHHHHH-hc---CCCCCcccCccccccCCHHHHHHH-HHHhCCCCCccCCccc
Q psy13389        257 HEGSKRYLCTMCPKCFTRKDDLNRHMR-NH---DGLKPFHCSVCFESFTQKALLNIH-LRIHTNSKPHACSICT  325 (617)
Q Consensus       257 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~  325 (617)
                      ..++++|.|+.|++.|.+...|..|++ .|   .+++||.|+.|++.|.+...|..| +++|++++||.|.++.
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            357788889999999988888888887 47   567888999999999888888888 7888888888888754

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2e-13  Score=103.22  Aligned_cols=62  Identities=39%  Similarity=0.561  Sum_probs=39.4

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCCCC
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP  346 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  346 (617)
                      |.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.....|..|++.|++++|
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            45556666666666666666666666666666666666666666666666666666666554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.6e-13  Score=104.39  Aligned_cols=62  Identities=35%  Similarity=0.671  Sum_probs=35.8

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCC
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGV  344 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  344 (617)
                      ++|.++++|.|++|++.|.+...|..|+++|++++||+|++|++.|.....|..|+++|+++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            34555555555555555555555555555555555555655665555555555555555543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=1.6e-13  Score=105.93  Aligned_cols=67  Identities=25%  Similarity=0.550  Sum_probs=50.9

Q ss_pred             HHHHhhhccCCCCcccCccCCcCCCchhHHHHhh-hhcCC-CccccccccccccChHhHHHHHHcCCCC
Q psy13389        363 LSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLR-VSHNV-NPFKCDICFKLFTKKSNLRTHIKTHEPI  429 (617)
Q Consensus       363 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~  429 (617)
                      |..|+++|++++||.|++|++.|.....|..|++ .|.+. ++|.|++|++.|.+...|..|+++|++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            4567788888888888888888888888888886 45443 6788888888888888888888776543

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=99.37  E-value=1.9e-13  Score=135.77  Aligned_cols=111  Identities=32%  Similarity=0.467  Sum_probs=97.5

Q ss_pred             cccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCceEEEecchhhhcchhhhhh
Q psy13389        504 VQAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYE  583 (617)
Q Consensus       504 ~~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~d~~~~~~~e~~~~~~  583 (617)
                      +..+.+.++++.++|||+++|++.+|++..+|+++ |.+|+.+|++.|+++||++++..++.+|||+++++..|.|+++.
T Consensus       184 ~~~~~~~~e~v~~aDiVi~atp~~~~v~~~~~l~~-g~~vi~~g~~~p~~~el~~~~~~~g~~~vD~~~~a~~~~G~~~~  262 (312)
T 2i99_A          184 VRVCSSVQEAVAGADVIITVTLATEPILFGEWVKP-GAHINAVGASRPDWRELDDELMKEAVLYVDSQEAALKESGDVLL  262 (312)
T ss_dssp             CEECSSHHHHHTTCSEEEECCCCSSCCBCGGGSCT-TCEEEECCCCSTTCCSBCHHHHHHSEEEESCHHHHHHHCHHHHT
T ss_pred             eEEeCCHHHHHhcCCEEEEEeCCCCcccCHHHcCC-CcEEEeCCCCCCCceeccHHHHhcCEEEECCHHHHHhhcCCccc
Confidence            34557788899999999999999999999899999 99999999999999999999999889999999999988898865


Q ss_pred             ccccccccccccccccccccCCCCceeeeccCCC
Q psy13389        584 QVPANMVGEVGGLIAANLTRDARYPLTVFHSMGV  617 (617)
Q Consensus       584 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~G~  617 (617)
                       .++...++|++++.|..+ ..+++++||+++|+
T Consensus       263 -~~~~~~g~L~~~v~G~~~-~~~~~~~vf~~~G~  294 (312)
T 2i99_A          263 -SGAEIFAELGEVIKGVKP-AHCEKTTVFKSLGM  294 (312)
T ss_dssp             -TTCCCCEEHHHHHHTSSC-CCTTSCEEEECCCC
T ss_pred             -ChhhccccHHHHhCCCCC-CCCCCcEEEECCCh
Confidence             234456799999999876 56678999999996

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=1.2e-13  Score=106.65  Aligned_cols=66  Identities=33%  Similarity=0.685  Sum_probs=41.1

Q ss_pred             HHHHHhcCCCCCcccCccccccCCHHHHHHHHH-HhCCC-CCccCCccccccCChhhHHHHHhhhcCC
Q psy13389        279 NRHMRNHDGLKPFHCSVCFESFTQKALLNIHLR-IHTNS-KPHACSICTESFSQKSNLYIHLKLQHGV  344 (617)
Q Consensus       279 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~  344 (617)
                      ..|+++|.+++||.|++|++.|.+...|..|++ .|.++ ++|.|+.|++.|.....|..|++.+|+.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            345666666666666666666666666666665 44443 5666666666666666666666665543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.36  E-value=4.2e-13  Score=96.79  Aligned_cols=55  Identities=40%  Similarity=0.661  Sum_probs=32.5

Q ss_pred             CCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhc
Q psy13389        288 LKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       288 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  342 (617)
                      +++|.|+.|++.|.+...|..|+++|++++||.|+.|++.|.....|..|++.||
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            3556666666666666666666666666666666666666666666666666555

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=6.1e-13  Score=100.50  Aligned_cols=63  Identities=22%  Similarity=0.355  Sum_probs=44.1

Q ss_pred             ccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCc
Q psy13389        257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPH  319 (617)
Q Consensus       257 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  319 (617)
                      |.++++|.|++|++.|.+...|..|++.|.++++|+|++|++.|.+...|..|+++|++++|.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            455666777777777777777777777777777777777777777777777777777766653

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=3.8e-13  Score=102.27  Aligned_cols=62  Identities=44%  Similarity=0.741  Sum_probs=38.2

Q ss_pred             hhccCCCceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCC
Q psy13389        255 KIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNS  316 (617)
Q Consensus       255 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  316 (617)
                      ++|.++++|.|++|++.|.+...|..|++.|.++++|+|++|++.|.+...|..|+++|+++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            34555566666666666666666666666666666666666666666666666666666544

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.36  E-value=3.8e-13  Score=96.99  Aligned_cols=56  Identities=32%  Similarity=0.647  Sum_probs=42.5

Q ss_pred             CCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHHHHHHcCC
Q psy13389        372 GVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHE  427 (617)
Q Consensus       372 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  427 (617)
                      |+++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            35678888888888888888888888888888888888888888888888887764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=4.3e-13  Score=100.01  Aligned_cols=60  Identities=28%  Similarity=0.607  Sum_probs=35.9

Q ss_pred             hcCCCCCcccCccccccCCHHHHHHHHHH-h-CCCCCccCCccccccCChhhHHHHHhhhcC
Q psy13389        284 NHDGLKPFHCSVCFESFTQKALLNIHLRI-H-TNSKPHACSICTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       284 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  343 (617)
                      +|.+++||.|+.|++.|.+...|..|+++ | .+++||.|+.|++.|.+...|..|++.+|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            45555566666666666666666666655 4 355666666666666666666666666554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=6.1e-13  Score=103.52  Aligned_cols=59  Identities=29%  Similarity=0.573  Sum_probs=48.4

Q ss_pred             hhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHHHHHH-cC
Q psy13389        368 RTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIK-TH  426 (617)
Q Consensus       368 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h  426 (617)
                      ..+...++|.|++|++.|.++..|.+|+++|++++||.|++|++.|.+...|.+|++ +|
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H   80 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH   80 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence            345667788888888888888888888888888888888888888888888888874 44

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.33  E-value=8.7e-13  Score=102.65  Aligned_cols=49  Identities=29%  Similarity=0.562  Sum_probs=21.8

Q ss_pred             CceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHH
Q psy13389        261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH  309 (617)
Q Consensus       261 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  309 (617)
                      ++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H   75 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRH   75 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHH
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHh
Confidence            3444444444444444444444444444444444444444444444444

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.31  E-value=1.8e-12  Score=93.41  Aligned_cols=55  Identities=31%  Similarity=0.598  Sum_probs=29.6

Q ss_pred             CcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCC
Q psy13389        290 PFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGV  344 (617)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  344 (617)
                      ||.|+.|++.|.+...|..|+++|++++||.|+.|++.|.+...|..|+++|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            3455555555555555555555555555555555555555555555555555443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=2.1e-12  Score=96.22  Aligned_cols=61  Identities=30%  Similarity=0.712  Sum_probs=42.9

Q ss_pred             hhccCCCceecCCCCCcCCCHHHHHHHHHh-c-CCCCCcccCccccccCCHHHHHHHHHHhCC
Q psy13389        255 KIHEGSKRYLCTMCPKCFTRKDDLNRHMRN-H-DGLKPFHCSVCFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       255 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  315 (617)
                      ++|.++++|.|+.|++.|.+...|..|++. | .++++|.|+.|++.|.+...|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            356666777777777777777777777766 5 466777777777777777777777776654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=8.3e-15  Score=111.95  Aligned_cols=69  Identities=19%  Similarity=0.249  Sum_probs=45.2

Q ss_pred             HHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCCCCccCCCC
Q psy13389        277 DLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVC  352 (617)
Q Consensus       277 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  352 (617)
                      .|..|++.|.++++|.|+.|++.|.+...|..       +++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            35556666666666666666666666555544       5667777777777777777777777766667766665

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.29  E-value=3.8e-12  Score=91.66  Aligned_cols=56  Identities=32%  Similarity=0.745  Sum_probs=38.0

Q ss_pred             ceecCCCCCcCCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCC
Q psy13389        262 RYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSK  317 (617)
Q Consensus       262 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  317 (617)
                      ||.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            46666666666666666666666666666777777777777777777766666554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.3e-14  Score=108.54  Aligned_cols=71  Identities=17%  Similarity=0.282  Sum_probs=50.0

Q ss_pred             chhHHHHhhhhcCCCccccccccccccChHhHHHHHHcCCCCCCccccccccCchhHHHHHhhhCCCCccccccccCCCC
Q psy13389        388 KSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEGLDEFD  467 (617)
Q Consensus       388 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~  467 (617)
                      ...|..|+++|++++||.|++|++.|.+...|..    ..+|.|+.|++.|.+...|..|++. |.              
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~----~~~~~C~~C~~~f~~~~~l~~H~~~-H~--------------   63 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR----RKTPMCEKCRKDSCQEAALNKDEGN-ES--------------   63 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC----SSSCCCHHHHHTCSCCCSSCCCSSC-CC--------------
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc----CCCCCCCCCChhhcCHHHHHHHHHh-hc--------------
Confidence            3445566666666666666666666666666655    4577888888888888888888776 65              


Q ss_pred             CCCCcccccCcc
Q psy13389        468 APKEKSFNCSKC  479 (617)
Q Consensus       468 ~~~~k~f~C~~C  479 (617)
                        ++++|.|++|
T Consensus        64 --~~~~~~C~~C   73 (73)
T 2ctu_A           64 --GKKTSGPSSG   73 (73)
T ss_dssp             --CCCCSSCCCC
T ss_pred             --CCCCCCCCCC
Confidence              6778888776

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.8e-12  Score=99.17  Aligned_cols=55  Identities=25%  Similarity=0.483  Sum_probs=37.3

Q ss_pred             ccCCCCcccCccCCcCCCchhHHHHhhhhcC---CCccccccccccccChHhHHHHHH
Q psy13389        370 VHGVKPFKCSMCDEGFPKKSVLKEHLRVSHN---VNPFKCDICFKLFTKKSNLRTHIK  424 (617)
Q Consensus       370 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~  424 (617)
                      |+++++|.|.+|++.|.....|..|+++|++   +++|.|++|++.|.+...|..|++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~   59 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS   59 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHH
Confidence            5666777777777777777777777777764   566666666666666666666663

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=6.2e-12  Score=91.61  Aligned_cols=53  Identities=34%  Similarity=0.800  Sum_probs=36.2

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHHHHH-HcC
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHI-KTH  426 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h  426 (617)
                      +||.|+.|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+ ++|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H   54 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH   54 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHc
Confidence            35677777777777777777777777777777777777666666666665 444

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=7e-12  Score=96.86  Aligned_cols=58  Identities=28%  Similarity=0.516  Sum_probs=39.2

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCC---CCCccCCccccccCChhhHHHHHhhhc
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTN---SKPHACSICTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~  342 (617)
                      |.++++|+|++|++.|.+...|..|+++|++   +++|.|++|++.|.....|..|++.+|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            5566667777777777777777777766664   667777777777777777777764433

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=8.3e-12  Score=90.92  Aligned_cols=49  Identities=37%  Similarity=0.794  Sum_probs=29.1

Q ss_pred             CcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHH
Q psy13389        290 PFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHL  338 (617)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  338 (617)
                      ||.|+.|++.|.+...|..|+++|++++||.|+.|++.|.+...|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            4555555555555555555555555555566666666666666666664

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=5.7e-12  Score=95.98  Aligned_cols=59  Identities=36%  Similarity=0.889  Sum_probs=54.1

Q ss_pred             hccCCCCcccC--ccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHHHHHHcCC
Q psy13389        369 TVHGVKPFKCS--MCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHE  427 (617)
Q Consensus       369 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  427 (617)
                      ++.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            56788899997  599999999999999999999999999999999999999999999884

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=3.4e-11  Score=96.94  Aligned_cols=60  Identities=28%  Similarity=0.350  Sum_probs=30.7

Q ss_pred             eecCCCCCcCCCHHHHHHHHHh-cCCCCC--------cccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        263 YLCTMCPKCFTRKDDLNRHMRN-HDGLKP--------FHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       263 ~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |.|+.|++.|.+...|..|++. |.+.++        |.|+.|++.|.+...|..|+++|++++||.|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4455555555555555555554 444444        44555555555555555555555555555443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.17  E-value=3.9e-11  Score=96.60  Aligned_cols=61  Identities=20%  Similarity=0.302  Sum_probs=48.9

Q ss_pred             CcccCccccccCCHHHHHHHHHH-hCCCCC--------ccCCccccccCChhhHHHHHhhhcCCCCccCC
Q psy13389        290 PFHCSVCFESFTQKALLNIHLRI-HTNSKP--------HACSICTESFSQKSNLYIHLKLQHGVNPFKCD  350 (617)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  350 (617)
                      .|+|+.|++.|.+...|..|+++ |.++++        |.|+.|++.|.+...|..|+++|++++||.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            46788888888888888888887 777776        77888888888777788887777777777775

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.3e-11  Score=92.58  Aligned_cols=57  Identities=33%  Similarity=0.765  Sum_probs=35.9

Q ss_pred             cCCCCCcccC--ccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhh
Q psy13389        285 HDGLKPFHCS--VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       285 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  341 (617)
                      |.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.....|..|+++|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            4555666665  36666666666666666666666666666666666666666666554

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.10  E-value=3e-11  Score=82.51  Aligned_cols=45  Identities=24%  Similarity=0.426  Sum_probs=40.0

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888889999999999999999999999999999999999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.10  E-value=3.1e-11  Score=82.47  Aligned_cols=45  Identities=27%  Similarity=0.322  Sum_probs=39.2

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            477888888889999999999999999999988888888988877

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.10  E-value=3.5e-11  Score=82.16  Aligned_cols=45  Identities=29%  Similarity=0.506  Sum_probs=40.3

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            377888999999999999999999999999999999999999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.9e-11  Score=81.96  Aligned_cols=45  Identities=24%  Similarity=0.382  Sum_probs=39.4

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            477888888899999999999999999999999998999998887

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.7e-11  Score=88.71  Aligned_cols=56  Identities=23%  Similarity=0.361  Sum_probs=35.0

Q ss_pred             CCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC-ccccccCChhhHHHHHhhhcCC
Q psy13389        287 GLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS-ICTESFSQKSNLYIHLKLQHGV  344 (617)
Q Consensus       287 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~  344 (617)
                      +.+||.|+.|++.|. ...|..|+++ ++++||.|+ .|++.|..++.|..|+++|-+.
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            445666666666666 6666666666 666666666 6666666666666666655443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.5e-11  Score=82.17  Aligned_cols=45  Identities=27%  Similarity=0.332  Sum_probs=40.1

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888889999999999999999999999999999999999887

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=3.5e-11  Score=89.43  Aligned_cols=56  Identities=20%  Similarity=0.350  Sum_probs=46.6

Q ss_pred             cCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc-cccccccChHhHHHHHHcCCC
Q psy13389        371 HGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD-ICFKLFTKKSNLRTHIKTHEP  428 (617)
Q Consensus       371 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~  428 (617)
                      .+.+||.|..|++.|. ...|..|+++ ++++||.|+ .|++.|..+..|..|+++|-+
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            4567888888888888 8888888888 888888888 888888888888888888743

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.8e-11  Score=82.64  Aligned_cols=45  Identities=22%  Similarity=0.376  Sum_probs=40.2

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.6e-11  Score=81.57  Aligned_cols=45  Identities=22%  Similarity=0.312  Sum_probs=39.8

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367888889999999999999999999999999999999999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.7e-11  Score=82.09  Aligned_cols=45  Identities=20%  Similarity=0.337  Sum_probs=39.3

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            477888888889999999999999999999988888888988877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.6e-11  Score=82.11  Aligned_cols=45  Identities=27%  Similarity=0.356  Sum_probs=39.1

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888889999999999999999999888888888888877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.6e-11  Score=82.09  Aligned_cols=45  Identities=29%  Similarity=0.425  Sum_probs=39.2

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888889999999999999999999988888888988877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.1e-11  Score=81.58  Aligned_cols=44  Identities=30%  Similarity=0.445  Sum_probs=38.8

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56788888899999999999999999999999999999998887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.1e-11  Score=82.48  Aligned_cols=45  Identities=24%  Similarity=0.468  Sum_probs=39.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.1e-11  Score=81.84  Aligned_cols=44  Identities=25%  Similarity=0.415  Sum_probs=38.3

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      |+++|++++||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788888888888888888888888888888888888888877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.6e-11  Score=81.58  Aligned_cols=45  Identities=29%  Similarity=0.420  Sum_probs=39.2

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.+...|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888899999999999999999999999988899998887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.08  E-value=2.9e-11  Score=82.59  Aligned_cols=45  Identities=33%  Similarity=0.441  Sum_probs=39.2

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888888889999999999999999999988888888888877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.2e-11  Score=82.39  Aligned_cols=45  Identities=29%  Similarity=0.470  Sum_probs=39.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.6e-11  Score=82.09  Aligned_cols=45  Identities=24%  Similarity=0.397  Sum_probs=39.2

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            377888888899999999999999999999999888889988877

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.3e-11  Score=83.08  Aligned_cols=45  Identities=22%  Similarity=0.362  Sum_probs=40.2

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            478888899999999999999999999999999999999999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3e-11  Score=82.50  Aligned_cols=45  Identities=24%  Similarity=0.375  Sum_probs=40.4

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3e-11  Score=82.50  Aligned_cols=45  Identities=22%  Similarity=0.388  Sum_probs=39.3

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888899999999999999999999999988889988876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.5e-11  Score=82.18  Aligned_cols=45  Identities=27%  Similarity=0.423  Sum_probs=39.5

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            477888888999999999999999999999999988899998887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.08  E-value=3.4e-11  Score=82.25  Aligned_cols=45  Identities=22%  Similarity=0.378  Sum_probs=39.8

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999877

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.6e-11  Score=81.55  Aligned_cols=45  Identities=27%  Similarity=0.454  Sum_probs=38.9

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888888888898899999888889999888888888888877

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.2e-11  Score=82.41  Aligned_cols=45  Identities=22%  Similarity=0.376  Sum_probs=40.0

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888889999999999999999999999999999999999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=4.3e-11  Score=81.75  Aligned_cols=45  Identities=27%  Similarity=0.369  Sum_probs=39.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367888888999999999999999999999999999999999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.1e-11  Score=81.85  Aligned_cols=45  Identities=22%  Similarity=0.369  Sum_probs=39.3

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888888899999999999999999999988888888988887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.4e-11  Score=82.27  Aligned_cols=45  Identities=24%  Similarity=0.361  Sum_probs=38.9

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888888888898899999888889999888888888888877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.4e-11  Score=82.26  Aligned_cols=45  Identities=20%  Similarity=0.427  Sum_probs=40.3

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4e-11  Score=81.91  Aligned_cols=45  Identities=29%  Similarity=0.414  Sum_probs=40.9

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.2e-11  Score=81.78  Aligned_cols=45  Identities=24%  Similarity=0.369  Sum_probs=38.9

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788888889999999999999999999888888888888877

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.9e-11  Score=81.42  Aligned_cols=44  Identities=25%  Similarity=0.413  Sum_probs=39.6

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67888889999999999999999999999999999999999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.06  E-value=4.9e-11  Score=81.42  Aligned_cols=45  Identities=27%  Similarity=0.389  Sum_probs=39.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.6e-11  Score=81.56  Aligned_cols=45  Identities=29%  Similarity=0.489  Sum_probs=39.9

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            477888889999999999999999999999999999999999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=3.9e-11  Score=81.94  Aligned_cols=45  Identities=22%  Similarity=0.197  Sum_probs=39.4

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||+|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888888899999999999999999999999988889998877

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.5e-11  Score=81.61  Aligned_cols=45  Identities=27%  Similarity=0.442  Sum_probs=39.9

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            477888889999999999999999999999999999999999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5e-11  Score=81.39  Aligned_cols=45  Identities=27%  Similarity=0.253  Sum_probs=39.8

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.2e-11  Score=81.32  Aligned_cols=45  Identities=29%  Similarity=0.483  Sum_probs=38.9

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888888888899999999988999999888888888888877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.05  E-value=7.7e-11  Score=80.42  Aligned_cols=44  Identities=34%  Similarity=0.539  Sum_probs=23.0

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.3e-11  Score=82.29  Aligned_cols=45  Identities=27%  Similarity=0.449  Sum_probs=39.3

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888899999999999999999999988988888988887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=6.6e-11  Score=79.91  Aligned_cols=43  Identities=35%  Similarity=0.616  Sum_probs=22.1

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      +++|.+++||.|+.|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444555555555555555555555555555555555555444

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.5e-11  Score=81.18  Aligned_cols=45  Identities=31%  Similarity=0.465  Sum_probs=39.5

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888899999999999999999999999988889998877

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.05  E-value=1.2e-10  Score=88.30  Aligned_cols=58  Identities=31%  Similarity=0.628  Sum_probs=51.3

Q ss_pred             hccCCCCcccCc--cCCcCCCchhHHHHhhhhcCCCcccccc--ccccccChHhHHHHHHcC
Q psy13389        369 TVHGVKPFKCSM--CDEGFPKKSVLKEHLRVSHNVNPFKCDI--CFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       369 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  426 (617)
                      .....++|.|..  |++.|.....|..|+++|++++||.|++  |++.|.+...|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345667899988  9999999999999999999999999965  999999999999999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.5e-11  Score=80.50  Aligned_cols=44  Identities=39%  Similarity=0.516  Sum_probs=22.8

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=6e-11  Score=80.99  Aligned_cols=45  Identities=29%  Similarity=0.395  Sum_probs=39.4

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888899999999999999999999999988999998887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.9e-11  Score=80.37  Aligned_cols=44  Identities=30%  Similarity=0.444  Sum_probs=21.3

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|+.|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444444444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=9.4e-11  Score=79.99  Aligned_cols=44  Identities=36%  Similarity=0.500  Sum_probs=22.6

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555444

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=6.6e-11  Score=80.79  Aligned_cols=45  Identities=18%  Similarity=0.087  Sum_probs=40.0

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888889999999999999999999999999999999999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.8e-11  Score=80.41  Aligned_cols=44  Identities=39%  Similarity=0.557  Sum_probs=21.5

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||+|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444445555555555555555555544444444444444

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9.3e-11  Score=80.01  Aligned_cols=44  Identities=36%  Similarity=0.570  Sum_probs=21.5

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||+|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444445555555555555555555544544444544444

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.7e-11  Score=80.45  Aligned_cols=41  Identities=39%  Similarity=0.611  Sum_probs=16.4

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      ++|.+++||.|+.|++.|.+...|..|+++|++++||.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            33333344444444444444444444444444334444333

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.9e-11  Score=80.39  Aligned_cols=44  Identities=30%  Similarity=0.472  Sum_probs=22.8

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||+|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.03  E-value=7.7e-11  Score=80.43  Aligned_cols=44  Identities=30%  Similarity=0.462  Sum_probs=38.9

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67788888899999999999999999999999998999998887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.8e-11  Score=80.40  Aligned_cols=44  Identities=36%  Similarity=0.659  Sum_probs=20.2

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.03  E-value=7.5e-11  Score=80.48  Aligned_cols=43  Identities=35%  Similarity=0.644  Sum_probs=18.5

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      +++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444433

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9e-11  Score=80.09  Aligned_cols=44  Identities=36%  Similarity=0.567  Sum_probs=23.8

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.9e-11  Score=81.44  Aligned_cols=45  Identities=27%  Similarity=0.420  Sum_probs=38.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            367788888888888888888888888888888888888888877

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1e-10  Score=79.80  Aligned_cols=44  Identities=34%  Similarity=0.508  Sum_probs=21.5

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444455555555555555555555555544444544443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.4e-11  Score=80.24  Aligned_cols=44  Identities=39%  Similarity=0.582  Sum_probs=23.1

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.3e-11  Score=80.90  Aligned_cols=45  Identities=22%  Similarity=0.418  Sum_probs=39.0

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888899999999999999999999988888888988865

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.4e-11  Score=80.25  Aligned_cols=41  Identities=41%  Similarity=0.630  Sum_probs=16.8

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      ++|.+++||.|++|++.|.+...|..|+++|++++||+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            33344444444444444444444444444444444444433

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.5e-11  Score=81.17  Aligned_cols=45  Identities=27%  Similarity=0.448  Sum_probs=39.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            467888888999999999999999999999999999999999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.9e-11  Score=80.68  Aligned_cols=44  Identities=25%  Similarity=0.380  Sum_probs=39.7

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            67788899999999999999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.9e-11  Score=80.66  Aligned_cols=39  Identities=41%  Similarity=0.707  Sum_probs=15.1

Q ss_pred             hcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        284 NHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       284 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      +|.+++||.|+.|++.|.+...|..|+++|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            333333333333333333333333333333333333333

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.6e-11  Score=80.48  Aligned_cols=43  Identities=35%  Similarity=0.575  Sum_probs=19.0

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      +++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            4 GSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             ccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8e-11  Score=80.36  Aligned_cols=44  Identities=32%  Similarity=0.511  Sum_probs=21.2

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444444443

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.02  E-value=7.9e-11  Score=80.38  Aligned_cols=39  Identities=31%  Similarity=0.546  Sum_probs=15.2

Q ss_pred             hcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        284 NHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       284 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      +|.+++||+|+.|++.|.+...|..|+++|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            6 SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            333333333333333333333333333333333333333

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.9e-11  Score=79.87  Aligned_cols=41  Identities=39%  Similarity=0.694  Sum_probs=17.2

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      ++|.++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1e-10  Score=79.82  Aligned_cols=44  Identities=41%  Similarity=0.679  Sum_probs=20.5

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.02  E-value=7.5e-11  Score=80.50  Aligned_cols=42  Identities=38%  Similarity=0.638  Sum_probs=17.8

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      +++|.+++||.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            4 GSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             ccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            333444444444444444444444444444444444444443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1e-10  Score=79.75  Aligned_cols=44  Identities=36%  Similarity=0.495  Sum_probs=19.4

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            33344444444444444444444444444444444444444443

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.6e-11  Score=79.95  Aligned_cols=41  Identities=37%  Similarity=0.586  Sum_probs=17.0

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      ++|.+++||.|+.|++.|.+...|..|+++|++++||.|+.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            33444444444444444444444444444444444444433

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.02  E-value=8.8e-11  Score=80.15  Aligned_cols=42  Identities=31%  Similarity=0.528  Sum_probs=17.7

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      +++|.+++||.|+.|++.|.+...|..|+++|++++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             ccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            333444444444444444444444444444444444444443

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.3e-11  Score=80.26  Aligned_cols=44  Identities=34%  Similarity=0.565  Sum_probs=20.7

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=80.16  Aligned_cols=45  Identities=22%  Similarity=0.367  Sum_probs=38.5

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhh-hhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLR-VSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  409 (617)
                      .|+++|.+++||.|++|++.|.....|..|++ +|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            36778888888888888888888888888888 8888888888877

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.7e-11  Score=79.94  Aligned_cols=39  Identities=26%  Similarity=0.533  Sum_probs=15.0

Q ss_pred             hcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        284 NHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       284 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      +|.+++||.|+.|++.|.+...|..|+++|++++||.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            6 SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            333333333333333333333333333333333333333

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=8.4e-11  Score=80.26  Aligned_cols=44  Identities=36%  Similarity=0.465  Sum_probs=19.6

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.1e-11  Score=80.32  Aligned_cols=41  Identities=34%  Similarity=0.560  Sum_probs=16.9

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      ++|.+++||.|+.|++.|.+...|..|+++|++++||.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            33344444444444444444444444444444444444433

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.4e-11  Score=80.25  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=21.3

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34444444444444444444444444444444444444444443

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.6e-11  Score=79.94  Aligned_cols=42  Identities=38%  Similarity=0.615  Sum_probs=17.4

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      +++|.+++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            4 GSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            333444444444444444444444444444444444444433

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=9.1e-11  Score=80.06  Aligned_cols=40  Identities=33%  Similarity=0.539  Sum_probs=16.0

Q ss_pred             hcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        284 NHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       284 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      +|.++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3333344444444444444444444444444334444333

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1e-10  Score=79.79  Aligned_cols=43  Identities=28%  Similarity=0.493  Sum_probs=20.1

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      +++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444444444444444444444444444444444444443

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=1.3e-10  Score=82.36  Aligned_cols=47  Identities=26%  Similarity=0.564  Sum_probs=38.4

Q ss_pred             hccCCCCcccCccCCcCCCchhHHHHhh-hhcCCCccccccccccccC
Q psy13389        369 TVHGVKPFKCSMCDEGFPKKSVLKEHLR-VSHNVNPFKCDICFKLFTK  415 (617)
Q Consensus       369 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  415 (617)
                      .|.+++||.|++|++.|.....|..|++ +|.+++||.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4567788888888888888888888886 7888888888888888865

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1e-10  Score=79.83  Aligned_cols=44  Identities=30%  Similarity=0.416  Sum_probs=21.5

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|+.|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444445555555555555555555544444444444444

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.3e-10  Score=79.32  Aligned_cols=43  Identities=30%  Similarity=0.456  Sum_probs=21.0

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      +++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3444444445555555555555555555444444444444444

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.3e-10  Score=79.27  Aligned_cols=44  Identities=25%  Similarity=0.195  Sum_probs=21.9

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||+|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444555555555555555555555555555555555444

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=79.59  Aligned_cols=44  Identities=36%  Similarity=0.609  Sum_probs=23.7

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=79.63  Aligned_cols=44  Identities=39%  Similarity=0.599  Sum_probs=19.0

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33344444444444444444444444444444444444444433

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.00  E-value=1.1e-10  Score=79.74  Aligned_cols=41  Identities=34%  Similarity=0.574  Sum_probs=16.9

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      ++|.+++||.|+.|++.|.+...|..|+++|++++||.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            33444444444444444444444444444444444444433

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1e-10  Score=79.85  Aligned_cols=43  Identities=28%  Similarity=0.362  Sum_probs=19.0

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      +++|.+++||.|+.|++.|.+...|..|+++|++++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444433

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=79.31  Aligned_cols=45  Identities=29%  Similarity=0.467  Sum_probs=39.6

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            377888899999999999999999999999999999999999875

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8.1e-11  Score=80.33  Aligned_cols=43  Identities=37%  Similarity=0.573  Sum_probs=18.7

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      +++|.+++||.|+.|++.|.+...|..|+++|++++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444433

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.8e-11  Score=79.91  Aligned_cols=43  Identities=28%  Similarity=0.556  Sum_probs=19.2

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      +++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            4 GSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.99  E-value=1.5e-10  Score=78.89  Aligned_cols=43  Identities=37%  Similarity=0.617  Sum_probs=19.9

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      +++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.99  E-value=3.7e-10  Score=85.48  Aligned_cols=56  Identities=29%  Similarity=0.607  Sum_probs=36.4

Q ss_pred             CCCCCcccCc--cccccCCHHHHHHHHHHhCCCCCccCCc--cccccCChhhHHHHHhhh
Q psy13389        286 DGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       286 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  341 (617)
                      ...++|.|..  |++.|.....|..|+++|++++||.|++  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3455666666  6666666666666666666666666654  666666666666666543

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.4e-10  Score=79.11  Aligned_cols=43  Identities=28%  Similarity=0.484  Sum_probs=21.1

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSIC  324 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  324 (617)
                      +++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3444444455555555555555555555555544445554444

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=3.1e-10  Score=80.36  Aligned_cols=46  Identities=30%  Similarity=0.633  Sum_probs=25.2

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHH-HhCCCCCccCCccccccCC
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLR-IHTNSKPHACSICTESFSQ  330 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  330 (617)
                      |.+++||.|++|++.|.+...|..|++ +|++++||.|++|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            344555555555555555555555554 5555555555555555543

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.6e-10  Score=78.87  Aligned_cols=41  Identities=37%  Similarity=0.629  Sum_probs=17.8

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      +++|.++++|.|+.|++.|.+...|..|+++|++++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            4 GSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=9.3e-11  Score=80.02  Aligned_cols=42  Identities=26%  Similarity=0.463  Sum_probs=18.4

Q ss_pred             HHhCCCCCccCCccccccCChhhHHHHHhhhcCCCCccCCCC
Q psy13389        311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVC  352 (617)
Q Consensus       311 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  352 (617)
                      ++|++++||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            5 SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2e-10  Score=78.72  Aligned_cols=43  Identities=35%  Similarity=0.505  Sum_probs=18.9

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHH-HhCCCCCccCCcc
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLR-IHTNSKPHACSIC  324 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  324 (617)
                      +++|.+++||.|++|++.|.+...|..|++ +|++++||+|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            334444444444444444444444444444 4444444444433

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=77.80  Aligned_cols=43  Identities=42%  Similarity=0.638  Sum_probs=21.9

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3444455555555555555555555555555555555555544

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.95  E-value=2.5e-10  Score=76.09  Aligned_cols=42  Identities=24%  Similarity=0.434  Sum_probs=36.4

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567888888899999999999999999999888888888884

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.5e-10  Score=75.34  Aligned_cols=42  Identities=21%  Similarity=0.415  Sum_probs=36.0

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788888888888988998888888898888888888874

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.1e-10  Score=77.33  Aligned_cols=44  Identities=27%  Similarity=0.459  Sum_probs=37.9

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788888889999999999999999999999998888888863

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.5e-10  Score=77.12  Aligned_cols=44  Identities=25%  Similarity=0.394  Sum_probs=37.8

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            47788888889999999999999999999998888888888864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.3e-10  Score=77.21  Aligned_cols=44  Identities=34%  Similarity=0.494  Sum_probs=37.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888888999999999999999999998888888888864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3e-10  Score=77.47  Aligned_cols=44  Identities=25%  Similarity=0.380  Sum_probs=38.9

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.7e-10  Score=76.98  Aligned_cols=44  Identities=25%  Similarity=0.367  Sum_probs=37.8

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37788888888999999999999999999998888888888863

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.93  E-value=2.9e-10  Score=77.51  Aligned_cols=44  Identities=27%  Similarity=0.450  Sum_probs=38.6

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888999999999999999999999999999999998864

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.1e-10  Score=77.37  Aligned_cols=43  Identities=23%  Similarity=0.382  Sum_probs=38.0

Q ss_pred             hhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        367 MRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       367 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      +++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678888999999999999999999999999999999999887

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.9e-10  Score=77.51  Aligned_cols=43  Identities=28%  Similarity=0.464  Sum_probs=37.2

Q ss_pred             hhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        367 MRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       367 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      +++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5678888889999999999999999999888888888888877

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.7e-10  Score=76.95  Aligned_cols=44  Identities=25%  Similarity=0.404  Sum_probs=37.5

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            36778888888899999999998889999988888888888863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.9e-10  Score=76.85  Aligned_cols=44  Identities=30%  Similarity=0.474  Sum_probs=37.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47788888888999999999999999999998888888888863

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.9e-10  Score=76.87  Aligned_cols=43  Identities=28%  Similarity=0.451  Sum_probs=37.8

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            6778888899999999999999999999999999999998863

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.5e-10  Score=77.09  Aligned_cols=44  Identities=25%  Similarity=0.394  Sum_probs=38.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788889999999999999999999999999999999999864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.3e-10  Score=77.23  Aligned_cols=44  Identities=25%  Similarity=0.419  Sum_probs=37.6

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888888999999999999999999988888888888863

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.4e-10  Score=76.58  Aligned_cols=44  Identities=27%  Similarity=0.416  Sum_probs=37.6

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888888999999999999999999988888888888863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.6e-10  Score=77.00  Aligned_cols=44  Identities=23%  Similarity=0.471  Sum_probs=38.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888999999999999999999999999999999998864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.1e-10  Score=76.72  Aligned_cols=44  Identities=25%  Similarity=0.405  Sum_probs=37.4

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888888888888888888888888988888888888863

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.91  E-value=4.6e-11  Score=87.44  Aligned_cols=54  Identities=17%  Similarity=0.428  Sum_probs=41.4

Q ss_pred             HHHHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhH
Q psy13389        363 LSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNL  419 (617)
Q Consensus       363 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  419 (617)
                      |..|+++|++++||.|+.|++.|.....|.   ++|.+++||.|++||+.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            345777888888888888888888777776   678888888888888888766544

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.91  E-value=4.8e-10  Score=75.99  Aligned_cols=42  Identities=21%  Similarity=0.360  Sum_probs=37.3

Q ss_pred             hccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccccc
Q psy13389        369 TVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICF  410 (617)
Q Consensus       369 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  410 (617)
                      .|++++||.|++|++.|.....|..|+++|+++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            577888999999999999999999999999999999999886

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.9e-10  Score=76.36  Aligned_cols=44  Identities=27%  Similarity=0.397  Sum_probs=38.3

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888899999999999999999999999999999998864

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.6e-10  Score=77.02  Aligned_cols=44  Identities=27%  Similarity=0.470  Sum_probs=38.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47788888999999999999999999999999999999999864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.1e-10  Score=76.72  Aligned_cols=44  Identities=25%  Similarity=0.411  Sum_probs=38.2

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            47788888899999999999999999999999999999998863

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.91  E-value=4.6e-10  Score=74.76  Aligned_cols=39  Identities=28%  Similarity=0.536  Sum_probs=17.9

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      ++|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            344444444444444444444444444444444444444

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.1e-10  Score=76.72  Aligned_cols=44  Identities=27%  Similarity=0.442  Sum_probs=37.8

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            47788888889999999999999999999998888888888864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.9e-10  Score=75.48  Aligned_cols=43  Identities=26%  Similarity=0.396  Sum_probs=37.1

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4778888888899999999999999999999888888888884

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4e-10  Score=76.80  Aligned_cols=44  Identities=32%  Similarity=0.440  Sum_probs=37.4

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46778888888888889888988888988988888888888864

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.3e-10  Score=76.16  Aligned_cols=42  Identities=24%  Similarity=0.397  Sum_probs=36.4

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      |+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            677888888888888888888888888888888888888885

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.90  E-value=5.5e-10  Score=76.08  Aligned_cols=42  Identities=40%  Similarity=0.633  Sum_probs=22.3

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |+++|.+++||.|+.|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=5.4e-10  Score=76.14  Aligned_cols=42  Identities=33%  Similarity=0.542  Sum_probs=22.2

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |+++|.+++||+|+.|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.3e-10  Score=76.64  Aligned_cols=44  Identities=25%  Similarity=0.496  Sum_probs=37.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47778888888999999999999999999998888888888863

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.2e-10  Score=76.68  Aligned_cols=43  Identities=28%  Similarity=0.382  Sum_probs=38.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4788889999999999999999999999999999999999986

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=1.1e-09  Score=74.13  Aligned_cols=41  Identities=29%  Similarity=0.521  Sum_probs=21.3

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccc
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICT  325 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  325 (617)
                      |.+++||.|+.|++.|.....|..|+++|+++++|.|+.||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            44455555555555555555555555555555555555543

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.3e-10  Score=75.33  Aligned_cols=43  Identities=26%  Similarity=0.398  Sum_probs=37.3

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4778888888999999999999999999999999888888884

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7.3e-10  Score=73.76  Aligned_cols=39  Identities=28%  Similarity=0.566  Sum_probs=18.5

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      ++|.+++||.|++|++.|.+...|..|+++|++++||+|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344444444444444444444444444444444444444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.4e-10  Score=75.77  Aligned_cols=42  Identities=43%  Similarity=0.676  Sum_probs=22.0

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444455555555555555555555555555555555555554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.1e-10  Score=75.89  Aligned_cols=43  Identities=19%  Similarity=0.363  Sum_probs=37.3

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4778888888999999999999999999999888888888884

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=5.7e-10  Score=76.81  Aligned_cols=43  Identities=16%  Similarity=0.260  Sum_probs=36.1

Q ss_pred             hccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccccc
Q psy13389        369 TVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFK  411 (617)
Q Consensus       369 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  411 (617)
                      .+.++++|.|.+|++.|.....|..|+++|++++||.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3566788888888888888888888888888888888888875

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.3e-10  Score=75.78  Aligned_cols=42  Identities=31%  Similarity=0.576  Sum_probs=21.1

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |+++|.+++||.|+.|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            344444555555555555555555555555555555555543

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.88  E-value=5.8e-11  Score=86.89  Aligned_cols=51  Identities=18%  Similarity=0.439  Sum_probs=31.4

Q ss_pred             HHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhh
Q psy13389        280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSN  333 (617)
Q Consensus       280 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  333 (617)
                      .|+++|.+++||.|+.|++.|.....|.   ++|++++||.|+.|++.|....+
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            4555666666666666666666655554   55666666666666666655443

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=5e-10  Score=75.46  Aligned_cols=43  Identities=28%  Similarity=0.441  Sum_probs=37.5

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4778888889999999999999999999999999988888884

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.8e-10  Score=75.33  Aligned_cols=42  Identities=26%  Similarity=0.551  Sum_probs=37.4

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            677888899999999999999999999999999999999886

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.7e-10  Score=76.94  Aligned_cols=43  Identities=26%  Similarity=0.441  Sum_probs=38.0

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778888889999999999999999999999999999999886

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=6.1e-10  Score=74.19  Aligned_cols=41  Identities=29%  Similarity=0.597  Sum_probs=35.5

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC  406 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  406 (617)
                      |+++|++++||.|++|++.|.....|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            66788888888888899999888889999888888888887

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.7e-10  Score=76.02  Aligned_cols=40  Identities=35%  Similarity=0.610  Sum_probs=17.5

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      +++|.+++||+|+.|++.|.+...|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.3e-10  Score=75.79  Aligned_cols=40  Identities=38%  Similarity=0.572  Sum_probs=17.2

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      +++|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=7e-10  Score=74.74  Aligned_cols=43  Identities=19%  Similarity=0.278  Sum_probs=37.6

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4778888888999999999999999999999999998998884

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.7e-10  Score=75.64  Aligned_cols=39  Identities=41%  Similarity=0.675  Sum_probs=16.3

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      ++|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            334444444444444444444444444444444444444

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=5.6e-10  Score=76.06  Aligned_cols=44  Identities=23%  Similarity=0.314  Sum_probs=38.6

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcC-CCcccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHN-VNPFKCDI  408 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  408 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++ ++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            377888899999999999999999999999999998 89999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.4e-10  Score=75.43  Aligned_cols=41  Identities=39%  Similarity=0.674  Sum_probs=18.3

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            33344444444444444444444444444444444444444

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.7e-10  Score=75.07  Aligned_cols=42  Identities=40%  Similarity=0.643  Sum_probs=20.5

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            334444444555555555555555555555555544444443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.5e-10  Score=75.72  Aligned_cols=42  Identities=36%  Similarity=0.611  Sum_probs=19.8

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.2e-10  Score=74.50  Aligned_cols=41  Identities=29%  Similarity=0.608  Sum_probs=34.3

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC  406 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  406 (617)
                      |+++|++++||.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67778888888888888888888888888888888888877

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.9e-10  Score=75.03  Aligned_cols=42  Identities=33%  Similarity=0.575  Sum_probs=20.8

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444445555555555555555555555555555555443

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.9e-10  Score=75.58  Aligned_cols=40  Identities=38%  Similarity=0.588  Sum_probs=17.3

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      +++|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            3334444444444444444444444444444444444444

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.5e-10  Score=75.40  Aligned_cols=40  Identities=35%  Similarity=0.618  Sum_probs=17.6

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      +++|.++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            4 GSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.4e-10  Score=75.44  Aligned_cols=40  Identities=35%  Similarity=0.579  Sum_probs=17.9

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      +++|.+++||.|+.|++.|.+...|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.5e-10  Score=75.72  Aligned_cols=39  Identities=44%  Similarity=0.772  Sum_probs=16.4

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      |.++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            334444444444444444444444444444444444443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7e-10  Score=75.54  Aligned_cols=37  Identities=38%  Similarity=0.702  Sum_probs=13.9

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      |.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             SSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3333333333333333333333333333333333333

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.2e-10  Score=75.49  Aligned_cols=40  Identities=40%  Similarity=0.663  Sum_probs=18.2

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      +++|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.3e-10  Score=75.78  Aligned_cols=43  Identities=30%  Similarity=0.543  Sum_probs=37.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778888889999999999999999999999999888888886

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.1e-10  Score=75.23  Aligned_cols=39  Identities=41%  Similarity=0.723  Sum_probs=15.7

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      ++|.+++||.|+.|++.|.+...|..|+++|++++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            5 SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            333333444444444444444444444444444444433

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=9.2e-10  Score=74.11  Aligned_cols=41  Identities=29%  Similarity=0.548  Sum_probs=20.7

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      |+++|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            34444455555555555555555555555555555555544

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7e-10  Score=75.55  Aligned_cols=37  Identities=30%  Similarity=0.628  Sum_probs=14.3

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      |.+++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            3333333333333333333333333333333333333

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.2e-10  Score=75.48  Aligned_cols=39  Identities=46%  Similarity=0.714  Sum_probs=16.2

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      ++|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            334444444444444444444444444444444444443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.6e-10  Score=75.38  Aligned_cols=39  Identities=38%  Similarity=0.592  Sum_probs=16.1

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      |.++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            333444444444444444444444444444444444433

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.1e-10  Score=74.17  Aligned_cols=41  Identities=24%  Similarity=0.519  Sum_probs=36.6

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC  406 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  406 (617)
                      |+++|++++||.|+.|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67788889999999999999999999999999999999887

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.8e-10  Score=75.32  Aligned_cols=39  Identities=33%  Similarity=0.611  Sum_probs=16.0

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      ++|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            5 SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            333344444444444444444444444444444444443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9e-10  Score=75.00  Aligned_cols=42  Identities=38%  Similarity=0.602  Sum_probs=22.9

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8e-10  Score=75.25  Aligned_cols=40  Identities=43%  Similarity=0.670  Sum_probs=17.7

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      +++|.++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.3e-10  Score=75.47  Aligned_cols=43  Identities=23%  Similarity=0.458  Sum_probs=37.0

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4777888888888888888888888888898888888888886

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.85  E-value=8.5e-10  Score=73.45  Aligned_cols=41  Identities=22%  Similarity=0.484  Sum_probs=35.8

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC  406 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  406 (617)
                      |+++|.+++||.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56788888889999999999999999999999988888887

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=1.7e-09  Score=74.40  Aligned_cols=39  Identities=26%  Similarity=0.451  Sum_probs=18.3

Q ss_pred             CCCCccCCccccccCChhhHHHHHhhhcCCCCccCCCCC
Q psy13389        315 NSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCP  353 (617)
Q Consensus       315 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  353 (617)
                      ++++|.|++|++.|.....|..|+++|++++||.|++|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            344444444444444444444444444444444444444

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.1e-09  Score=73.71  Aligned_cols=42  Identities=17%  Similarity=0.193  Sum_probs=36.6

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            567888888999999999999999999999999888888884

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.84  E-value=4.8e-10  Score=79.40  Aligned_cols=47  Identities=19%  Similarity=0.401  Sum_probs=19.6

Q ss_pred             CCCHHHHHHHHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCC
Q psy13389        272 FTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKP  318 (617)
Q Consensus       272 f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  318 (617)
                      |.....|..|++.|.++++|.|+.|++.|.+...|..|+++|++++|
T Consensus         6 ~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A            6 AKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             cCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            33333344444444444444444444444444444444444444433

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.9e-10  Score=74.20  Aligned_cols=40  Identities=33%  Similarity=0.594  Sum_probs=16.9

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      +++|.++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            3334444444444444444444444444444444444443

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7.8e-10  Score=74.48  Aligned_cols=41  Identities=22%  Similarity=0.440  Sum_probs=18.3

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            33444444444444444444444444444444444444444

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=9.6e-10  Score=74.87  Aligned_cols=42  Identities=36%  Similarity=0.553  Sum_probs=21.5

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |+++|.+++||+|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            444455555555555555555555555555555555555543

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=6.8e-10  Score=75.62  Aligned_cols=43  Identities=28%  Similarity=0.451  Sum_probs=38.2

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778888999999999999999999999999999999999885

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.1e-09  Score=73.79  Aligned_cols=41  Identities=32%  Similarity=0.496  Sum_probs=20.4

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      |+++|.+++||.|+.|++.|.+...|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            34444445555555555555555555555555555555444

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.83  E-value=4.9e-10  Score=79.34  Aligned_cols=51  Identities=24%  Similarity=0.307  Sum_probs=40.7

Q ss_pred             ccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCCCCc
Q psy13389        297 FESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPF  347 (617)
Q Consensus       297 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  347 (617)
                      ++.|.....|..|+++|++++||.|+.|++.|...+.|..|+++|++++||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            356777777888888888888888888888888888888888888887776

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.9e-10  Score=74.79  Aligned_cols=42  Identities=31%  Similarity=0.581  Sum_probs=20.1

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |+++|.++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.2e-09  Score=73.57  Aligned_cols=39  Identities=21%  Similarity=0.375  Sum_probs=16.1

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      ++|.+++||.|+.|++.|.+...|..|+++|++++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            334444444444444444444444444444444444433

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.81  E-value=1.5e-09  Score=72.22  Aligned_cols=40  Identities=33%  Similarity=0.576  Sum_probs=20.0

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      +++|.+++||.|+.|++.|.+...|..|+++|++++||.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3444445555555555555555555555555555555444

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1e-09  Score=74.74  Aligned_cols=39  Identities=31%  Similarity=0.477  Sum_probs=16.4

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCC-CCCccC
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTN-SKPHAC  321 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C  321 (617)
                      ++|.+++||.|+.|++.|.+...|..|+++|++ ++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            334444444444444444444444444444444 444444

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.9e-09  Score=73.35  Aligned_cols=42  Identities=24%  Similarity=0.353  Sum_probs=36.3

Q ss_pred             hhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        367 MRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       367 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      +++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            567888889999999999999999999999999999998863

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=74.23  Aligned_cols=41  Identities=32%  Similarity=0.591  Sum_probs=18.7

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      |+++|.+++||.|+.|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            33444444444444444444444444444444444444444

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=6.7e-10  Score=74.82  Aligned_cols=43  Identities=14%  Similarity=0.278  Sum_probs=37.7

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778888899999999999999999999999999999998884

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.1e-09  Score=72.82  Aligned_cols=35  Identities=43%  Similarity=0.788  Sum_probs=13.1

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCCCCc
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPH  319 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  319 (617)
                      |.+++||.|+.|++.|.+...|..|+++|++++||
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            33333333333333333333333333333333333

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.9e-09  Score=72.50  Aligned_cols=40  Identities=18%  Similarity=0.262  Sum_probs=19.6

Q ss_pred             HHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        282 MRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       282 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      +++|.++++|.|++|++.|.+...|..|+++|++++||+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            3444444445555555555555555555555544444444

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.4e-09  Score=74.07  Aligned_cols=37  Identities=30%  Similarity=0.615  Sum_probs=14.8

Q ss_pred             hCCCCCccCCccccccCChhhHHHHHhhhcCCCCccC
Q psy13389        313 HTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC  349 (617)
Q Consensus       313 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  349 (617)
                      |++++||.|++|++.|.....|..|+++|++++||+|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3333344444444444444444444444433344433

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.1e-09  Score=72.96  Aligned_cols=39  Identities=38%  Similarity=0.650  Sum_probs=17.1

Q ss_pred             HhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       283 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      ++|.+++||.|+.|++.|.+...|..|+++|++++||.|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            334444444444444444444444444444444444443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.8e-09  Score=72.63  Aligned_cols=42  Identities=29%  Similarity=0.414  Sum_probs=36.8

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccc
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC  406 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  406 (617)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            477888888999999999999999999999999998888887

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=9.5e-10  Score=73.20  Aligned_cols=35  Identities=43%  Similarity=0.861  Sum_probs=13.3

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCCCCc
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPH  319 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  319 (617)
                      |.+++||.|+.|++.|.+...|..|+++|++++||
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A            6 SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             CCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             cCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            33333333333333333333333333333333333

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.7e-09  Score=74.34  Aligned_cols=44  Identities=27%  Similarity=0.412  Sum_probs=37.4

Q ss_pred             HhhhccCCCCcccC--ccCCcCCCchhHHHHhhhhcCCCccccccc
Q psy13389        366 HMRTVHGVKPFKCS--MCDEGFPKKSVLKEHLRVSHNVNPFKCDIC  409 (617)
Q Consensus       366 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  409 (617)
                      |.++|+++++|.|.  .|++.|.....|..|+++|++++||+|++|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678888888887  799999888889999888888888888877

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.78  E-value=3.1e-09  Score=71.05  Aligned_cols=41  Identities=24%  Similarity=0.350  Sum_probs=35.0

Q ss_pred             hhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        368 RTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       368 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      ++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            46778888999999999999999999999998888888864

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.2e-09  Score=74.35  Aligned_cols=41  Identities=32%  Similarity=0.507  Sum_probs=19.5

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            34444444444444444444444444444444444444444

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.8e-09  Score=73.05  Aligned_cols=42  Identities=26%  Similarity=0.431  Sum_probs=35.8

Q ss_pred             hhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccc
Q psy13389        367 MRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDI  408 (617)
Q Consensus       367 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  408 (617)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            456788888999999999999999999998888888888863

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.74  E-value=6.8e-09  Score=69.37  Aligned_cols=38  Identities=26%  Similarity=0.392  Sum_probs=18.0

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |.++++|.|+.|++.|.+...|..|+++|++++||.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            44444444444444444444444444444444444443

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=5.6e-09  Score=70.97  Aligned_cols=39  Identities=36%  Similarity=0.479  Sum_probs=18.6

Q ss_pred             hcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        284 NHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       284 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      .|.++++|+|++|++.|.+...|..|+++|++++||.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            344444444444444444444444444444444444443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.8e-09  Score=72.66  Aligned_cols=41  Identities=24%  Similarity=0.391  Sum_probs=20.8

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            34444555555555555555555555555555555555544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.9e-09  Score=70.96  Aligned_cols=41  Identities=29%  Similarity=0.517  Sum_probs=18.6

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            33444444444444444444444444444444444444443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=5.1e-09  Score=69.15  Aligned_cols=39  Identities=23%  Similarity=0.492  Sum_probs=33.2

Q ss_pred             hhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccc
Q psy13389        368 RTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC  406 (617)
Q Consensus       368 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  406 (617)
                      ++|++++||.|++|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            467788888888888888888888888888888888887

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.8e-09  Score=72.54  Aligned_cols=39  Identities=36%  Similarity=0.534  Sum_probs=15.5

Q ss_pred             cCCCCCcccC--ccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        285 HDGLKPFHCS--VCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       285 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      |.++++|+|.  .|++.|.....|..|+++|++++||+|+.
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3333344443  34444444444444444444444444333

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3.9e-09  Score=71.37  Aligned_cols=37  Identities=43%  Similarity=0.683  Sum_probs=16.8

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccC
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC  321 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  321 (617)
                      |.++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            4444444444444444444444444444444444444

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.2e-09  Score=82.95  Aligned_cols=63  Identities=24%  Similarity=0.230  Sum_probs=46.2

Q ss_pred             HHHHHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHHHHHHcCC
Q psy13389        362 QLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHE  427 (617)
Q Consensus       362 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  427 (617)
                      .|..|++++.+.+|+.|..|++.|. ...|..|+ .|.+.+||.|+.|++.|. ...|..|+++|.
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~   66 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCG   66 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBT
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHcc
Confidence            4566777777777778888877774 77777777 777777777777777766 467777777664

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1e-08  Score=67.65  Aligned_cols=32  Identities=44%  Similarity=0.750  Sum_probs=11.8

Q ss_pred             CCCcccCccccccCCHHHHHHHHHHhCCCCCc
Q psy13389        288 LKPFHCSVCFESFTQKALLNIHLRIHTNSKPH  319 (617)
Q Consensus       288 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  319 (617)
                      ++||.|+.|++.|.....|..|+++|++++||
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (41)
T 2ept_A            8 QRVYECQECGKSFRQKGSLTLHERIHTGSGPS   39 (41)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHGGGCCCCSCS
T ss_pred             CCCeECCCCCCCcCCHHHHHHHHHHhCCCCCc
Confidence            33333333333333333333333333333333

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=4.5e-09  Score=79.79  Aligned_cols=66  Identities=21%  Similarity=0.281  Sum_probs=40.5

Q ss_pred             hhhhhhhhhhcCCCcccCCCCccccCChhHHHHHHhhccCCCceecCCCCCcCCCHHHHHHHHHhcCCC
Q psy13389        220 SDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGL  288 (617)
Q Consensus       220 ~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  288 (617)
                      ..|..|+++|.+.+|+.|..|++.|. ...|..|+ .|.+++++.|+.|++.|. ...|..|+++|.+.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            44566666666666666666666663 66666666 566666666666666655 35666666665543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=5.1e-09  Score=82.07  Aligned_cols=58  Identities=14%  Similarity=0.229  Sum_probs=46.4

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHHHHHHcCC
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHE  427 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  427 (617)
                      |.++|++++||.|++|++.|.....|..|+++|++++||+|..|.    ....|..|.++|.
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~   73 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYAD   73 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccc
Confidence            456788889999999999999999999999999999999987654    4455666666664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.48  E-value=6.5e-08  Score=62.88  Aligned_cols=37  Identities=19%  Similarity=0.387  Sum_probs=29.5

Q ss_pred             ccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccc
Q psy13389        370 VHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKC  406 (617)
Q Consensus       370 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  406 (617)
                      |++++||.|++|++.|.....|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4567788888888888888888888888888888765

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=5.7e-09  Score=81.83  Aligned_cols=40  Identities=20%  Similarity=0.304  Sum_probs=21.7

Q ss_pred             hcCCCCCcccCccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy13389        284 NHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI  323 (617)
Q Consensus       284 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  323 (617)
                      +|.+++||.|+.|++.|.....|..|+++|++++||+|..
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~   58 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKR   58 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccch
Confidence            3455555555555555555555555555555555555543

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.45  E-value=1.1e-07  Score=61.80  Aligned_cols=32  Identities=22%  Similarity=0.581  Sum_probs=12.9

Q ss_pred             CCCcccCccccccCCHHHHHHHHHHhCCCCCc
Q psy13389        288 LKPFHCSVCFESFTQKALLNIHLRIHTNSKPH  319 (617)
Q Consensus       288 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  319 (617)
                      ++||.|+.|++.|.+...|..|+++|++++||
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            33344444444444444444444444443333

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.45  E-value=9e-08  Score=61.31  Aligned_cols=35  Identities=31%  Similarity=0.628  Sum_probs=22.6

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhhcC
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHN  400 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  400 (617)
                      |+++|++++||.|+.|++.|.....|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45566666666666666666666666666666654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=7.7e-08  Score=61.63  Aligned_cols=36  Identities=17%  Similarity=0.586  Sum_probs=27.9

Q ss_pred             hhccCCCCcccCccCCcCCCchhHHHHhhhhcCCCc
Q psy13389        368 RTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNP  403 (617)
Q Consensus       368 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  403 (617)
                      ++|++++||.|..|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            467777888888888888888888888888877654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.39  E-value=1.8e-07  Score=67.29  Aligned_cols=39  Identities=21%  Similarity=0.323  Sum_probs=32.7

Q ss_pred             ccCCCCcccCc--cCCcCCCchhHHHHh-hhhcCCCcccccc
Q psy13389        370 VHGVKPFKCSM--CDEGFPKKSVLKEHL-RVSHNVNPFKCDI  408 (617)
Q Consensus       370 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  408 (617)
                      .+++|||+|..  |+++|.....|.+|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            56788999975  999999999999997 6888999988853

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.3e-07  Score=60.46  Aligned_cols=32  Identities=22%  Similarity=0.588  Sum_probs=15.1

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCC
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNS  316 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  316 (617)
                      |.+++||.|+.|++.|.+...|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            44444444444444444444444444444443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.39  E-value=9.6e-08  Score=61.17  Aligned_cols=33  Identities=36%  Similarity=0.549  Sum_probs=15.3

Q ss_pred             HHHhCCCCCccCCccccccCChhhHHHHHhhhc
Q psy13389        310 LRIHTNSKPHACSICTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       310 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  342 (617)
                      +++|++++||.|+.|++.|.....|..|+++|.
T Consensus         3 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            334444444444444444444444444444443

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.36  E-value=3.1e-07  Score=66.03  Aligned_cols=36  Identities=28%  Similarity=0.661  Sum_probs=16.6

Q ss_pred             CCCCCcccCc--cccccCCHHHHHHHH-HHhCCCCCccC
Q psy13389        286 DGLKPFHCSV--CFESFTQKALLNIHL-RIHTNSKPHAC  321 (617)
Q Consensus       286 ~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C  321 (617)
                      .+++||+|..  |++.|.....|..|+ ++|++++||.|
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            3444444432  444444444444443 34444444444

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.35  E-value=2.2e-07  Score=58.55  Aligned_cols=34  Identities=24%  Similarity=0.534  Sum_probs=24.9

Q ss_pred             ccCCCCcccCccCCcCCCchhHHHHhhhhcCCCc
Q psy13389        370 VHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNP  403 (617)
Q Consensus       370 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  403 (617)
                      |+++++|.|++|++.|.....|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5667777777777777777777777777776653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.33  E-value=2.7e-07  Score=58.14  Aligned_cols=34  Identities=29%  Similarity=0.631  Sum_probs=24.9

Q ss_pred             ccCCCCcccCccCCcCCCchhHHHHhhhhcCCCc
Q psy13389        370 VHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNP  403 (617)
Q Consensus       370 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  403 (617)
                      |++++||.|.+|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5667777777777777777777777777776653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.33  E-value=3.9e-07  Score=56.57  Aligned_cols=30  Identities=23%  Similarity=0.489  Sum_probs=14.2

Q ss_pred             CcccCccccccCCHHHHHHHHHHhCCCCCc
Q psy13389        290 PFHCSVCFESFTQKALLNIHLRIHTNSKPH  319 (617)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  319 (617)
                      ||.|+.|++.|.+...|..|+++|++++||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            344444444444444444444444444444

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.32  E-value=3.3e-07  Score=56.94  Aligned_cols=32  Identities=19%  Similarity=0.460  Sum_probs=25.6

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhcCCCccc
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFK  405 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  405 (617)
                      +||.|+.|++.|.....|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46788888888888888888888888887775

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.32  E-value=4e-07  Score=57.28  Aligned_cols=29  Identities=24%  Similarity=0.587  Sum_probs=12.2

Q ss_pred             CCCCcccCccccccCCHHHHHHHHHHhCC
Q psy13389        287 GLKPFHCSVCFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       287 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  315 (617)
                      ++++|.|+.|++.|.+...|..|+++|++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            33444444444444444444444444443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.29  E-value=4.6e-07  Score=57.05  Aligned_cols=28  Identities=46%  Similarity=0.966  Sum_probs=11.0

Q ss_pred             CCCCcccCccccccCCHHHHHHHHHHhC
Q psy13389        287 GLKPFHCSVCFESFTQKALLNIHLRIHT  314 (617)
Q Consensus       287 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~  314 (617)
                      +++||.|+.|++.|.+...|..|+++|+
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            3333333333333333333333333333

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=7.4e-07  Score=57.03  Aligned_cols=32  Identities=31%  Similarity=0.498  Sum_probs=21.1

Q ss_pred             ccCCCCcccCc--cCCcCCCchhHHHHhhhhcCC
Q psy13389        370 VHGVKPFKCSM--CDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       370 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      +++++||+|+.  |++.|..+..|++|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45666677764  777777777777777666654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=1.1e-06  Score=56.19  Aligned_cols=30  Identities=30%  Similarity=0.431  Sum_probs=13.3

Q ss_pred             CCCCCcccCc--cccccCCHHHHHHHHHHhCC
Q psy13389        286 DGLKPFHCSV--CFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       286 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  315 (617)
                      .+++||+|+.  |++.|.++..|..|+++|++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            3444444443  44444444444444444443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=7.2e-07  Score=56.95  Aligned_cols=34  Identities=29%  Similarity=0.470  Sum_probs=25.7

Q ss_pred             hhccCCCCcccCccCCcCCCc-hhHHHHhhhhcCC
Q psy13389        368 RTVHGVKPFKCSMCDEGFPKK-SVLKEHLRVSHNV  401 (617)
Q Consensus       368 ~~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~  401 (617)
                      ++|++++||.|+.|++.|... ..|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            356777788888888888887 7888888777664

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.17  E-value=8.1e-07  Score=57.08  Aligned_cols=35  Identities=26%  Similarity=0.473  Sum_probs=28.7

Q ss_pred             ccCCCCcccC--ccCCcCCCchhHHHHhhhhcCCCcc
Q psy13389        370 VHGVKPFKCS--MCDEGFPKKSVLKEHLRVSHNVNPF  404 (617)
Q Consensus       370 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  404 (617)
                      |++++||.|.  .|++.|.....|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4577888888  4888888888888888888888776

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=5.5e-07  Score=57.57  Aligned_cols=32  Identities=25%  Similarity=0.388  Sum_probs=17.6

Q ss_pred             hccCCCCcccCccCCcCCCchhHHHH-hhhhcC
Q psy13389        369 TVHGVKPFKCSMCDEGFPKKSVLKEH-LRVSHN  400 (617)
Q Consensus       369 ~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  400 (617)
                      +|++++||.|+.|++.|.....|..| +++|++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            45555555555555555555555555 555543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=9.1e-07  Score=56.05  Aligned_cols=33  Identities=36%  Similarity=0.579  Sum_probs=21.3

Q ss_pred             hccCCCCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        369 TVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       369 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      +|.+++||.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            355666666666666666666666666666554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=8.5e-07  Score=56.19  Aligned_cols=33  Identities=15%  Similarity=0.351  Sum_probs=20.6

Q ss_pred             hccCCCCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        369 TVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       369 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      .|++++||.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            355566666666666666666666666666543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.15  E-value=6.1e-07  Score=56.49  Aligned_cols=25  Identities=28%  Similarity=0.462  Sum_probs=13.5

Q ss_pred             cCCCCcccCccCCcCCCchhHHHHh
Q psy13389        371 HGVKPFKCSMCDEGFPKKSVLKEHL  395 (617)
Q Consensus       371 ~~~~~~~C~~C~~~f~~~~~l~~H~  395 (617)
                      .+++||.|+.|+++|.+.+.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3455555555555555555555554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=1.1e-06  Score=55.67  Aligned_cols=33  Identities=30%  Similarity=0.469  Sum_probs=23.8

Q ss_pred             hccCCCCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        369 TVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       369 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      +|.+++||.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            456677777777777777777777777777654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.14  E-value=7.2e-07  Score=56.15  Aligned_cols=32  Identities=25%  Similarity=0.378  Sum_probs=26.8

Q ss_pred             hcCCCccccccccccccChHhHHHHHHcCCCCCCcc
Q psy13389        398 SHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDK  433 (617)
Q Consensus       398 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~C~~  433 (617)
                      +.+++||.|+.||++|.++++|.+|+    ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~----py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ----AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH----HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC----CeECcC
Confidence            35788999999999999999999998    777754

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.13  E-value=1.3e-06  Score=56.03  Aligned_cols=32  Identities=31%  Similarity=0.526  Sum_probs=13.3

Q ss_pred             CCCCcccC--ccccccCCHHHHHHHHHHhCCCCC
Q psy13389        287 GLKPFHCS--VCFESFTQKALLNIHLRIHTNSKP  318 (617)
Q Consensus       287 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~  318 (617)
                      +++||.|+  .|++.|.+...|..|+++|++++|
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            33444444  244444444444444444444433

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=1.7e-06  Score=54.65  Aligned_cols=31  Identities=42%  Similarity=0.645  Sum_probs=13.8

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCC
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  315 (617)
                      |.+++||.|+.|++.|.....|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            3344444444444444444444444444443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=1.5e-06  Score=54.94  Aligned_cols=31  Identities=32%  Similarity=0.568  Sum_probs=13.8

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCC
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  315 (617)
                      |.+++||+|+.|++.|.+...|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            3344444444444444444444444444443

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=1.8e-06  Score=54.57  Aligned_cols=33  Identities=27%  Similarity=0.420  Sum_probs=24.3

Q ss_pred             hccCCCCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        369 TVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       369 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      .|.++++|.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            356677777777777777777777777777665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1e-06  Score=56.32  Aligned_cols=30  Identities=27%  Similarity=0.396  Sum_probs=13.4

Q ss_pred             cCCCCCcccCccccccCCHHHHHHH-HHHhC
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIH-LRIHT  314 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~  314 (617)
                      |.+++||+|+.|++.|.+...|..| +++|+
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            4444444444444444444444444 44443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.3e-06  Score=55.32  Aligned_cols=27  Identities=19%  Similarity=0.454  Sum_probs=10.8

Q ss_pred             CCCCcccCccccccCCHHHHHHHHHHh
Q psy13389        287 GLKPFHCSVCFESFTQKALLNIHLRIH  313 (617)
Q Consensus       287 ~~~~~~C~~C~~~f~~~~~l~~H~~~h  313 (617)
                      +++||+|+.|++.|.....|..|+++|
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHMLVH   32 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHh
Confidence            333344444444444444444444333

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=2.5e-06  Score=53.88  Aligned_cols=30  Identities=30%  Similarity=0.494  Sum_probs=12.9

Q ss_pred             CCCCCcccCccccccCCHHHHHHHHHHhCC
Q psy13389        286 DGLKPFHCSVCFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       286 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  315 (617)
                      .++++|.|+.|++.|.+...|..|+++|++
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            334444444444444444444444444433

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1.2e-06  Score=55.83  Aligned_cols=30  Identities=20%  Similarity=0.418  Sum_probs=12.4

Q ss_pred             hCCCCCccCCccccccCCh-hhHHHHHhhhc
Q psy13389        313 HTNSKPHACSICTESFSQK-SNLYIHLKLQH  342 (617)
Q Consensus       313 h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~  342 (617)
                      |++++||.|+.|++.|... ..|..|+++|.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            3334444444444444444 44444444433

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=2.4e-06  Score=53.99  Aligned_cols=32  Identities=34%  Similarity=0.565  Sum_probs=22.1

Q ss_pred             ccCCCCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        370 VHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       370 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      |.+++||.|++|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            45566777777777777777777777776654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=3.3e-06  Score=53.33  Aligned_cols=28  Identities=46%  Similarity=0.695  Sum_probs=11.6

Q ss_pred             CCCCcccCccccccCCHHHHHHHHHHhC
Q psy13389        287 GLKPFHCSVCFESFTQKALLNIHLRIHT  314 (617)
Q Consensus       287 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~  314 (617)
                      +++||.|+.|++.|.....|..|+++|+
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            3334444444444444444444444443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.99  E-value=2.6e-06  Score=58.08  Aligned_cols=32  Identities=25%  Similarity=0.540  Sum_probs=18.1

Q ss_pred             hCCCCCccCCccccccCChhhHHHHHh-hhcCC
Q psy13389        313 HTNSKPHACSICTESFSQKSNLYIHLK-LQHGV  344 (617)
Q Consensus       313 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  344 (617)
                      |++++||.|.+|++.|....+|..|++ +|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            455556666666666666666666655 55544

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.98  E-value=2.6e-06  Score=58.03  Aligned_cols=32  Identities=19%  Similarity=0.449  Sum_probs=19.7

Q ss_pred             ccCCCCcccCccCCcCCCchhHHHHhh-hhcCC
Q psy13389        370 VHGVKPFKCSMCDEGFPKKSVLKEHLR-VSHNV  401 (617)
Q Consensus       370 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  401 (617)
                      |++++||.|.+|++.|.....|..|++ +|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            555666666666666666666666666 55544

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=1.6e-06  Score=58.78  Aligned_cols=39  Identities=15%  Similarity=0.291  Sum_probs=29.1

Q ss_pred             HHHhhhccCCCCcccC--ccCCcCCCchhHHHHhhhhcCCC
Q psy13389        364 SLHMRTVHGVKPFKCS--MCDEGFPKKSVLKEHLRVSHNVN  402 (617)
Q Consensus       364 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  402 (617)
                      ..|...|++++||.|+  .|++.|.....|..|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3445567888888885  68888888888888888887653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.94  E-value=4.1e-07  Score=55.99  Aligned_cols=30  Identities=23%  Similarity=0.618  Sum_probs=18.4

Q ss_pred             CcccCccCCcCCCchhHHHHhhhhcCCCcc
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSHNVNPF  404 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  404 (617)
                      ||.|+.|++.|.....|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            556666666666666666666666665554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.91  E-value=4.5e-06  Score=48.80  Aligned_cols=25  Identities=20%  Similarity=0.700  Sum_probs=15.6

Q ss_pred             CccccccccccccChHhHHHHHHcC
Q psy13389        402 NPFKCDICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       402 ~~~~C~~C~~~f~~~~~l~~H~~~h  426 (617)
                      +||.|+.||+.|.+.+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666666655

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.91  E-value=5.2e-06  Score=52.84  Aligned_cols=32  Identities=28%  Similarity=0.437  Sum_probs=23.2

Q ss_pred             ccCCCCcccCc--cCCcCCCchhHHHHhhhhcCC
Q psy13389        370 VHGVKPFKCSM--CDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       370 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      |++++||.|.+  |++.|.....|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56677777774  777777777777777777664

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.89  E-value=6.9e-06  Score=52.25  Aligned_cols=28  Identities=32%  Similarity=0.573  Sum_probs=11.8

Q ss_pred             CCCCcccCc--cccccCCHHHHHHHHHHhC
Q psy13389        287 GLKPFHCSV--CFESFTQKALLNIHLRIHT  314 (617)
Q Consensus       287 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  314 (617)
                      +++||.|++  |++.|.+...|..|+++|+
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            344444442  4444444444444444443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.87  E-value=6.2e-06  Score=48.12  Aligned_cols=25  Identities=32%  Similarity=0.748  Sum_probs=13.5

Q ss_pred             CccccccccccccChHhHHHHHHcC
Q psy13389        402 NPFKCDICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       402 ~~~~C~~C~~~f~~~~~l~~H~~~h  426 (617)
                      +||.|+.||+.|.+...|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3455555555555555555555544

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.87  E-value=1.1e-05  Score=47.78  Aligned_cols=24  Identities=42%  Similarity=0.825  Sum_probs=10.1

Q ss_pred             cccCccccccCCHHHHHHHHHHhC
Q psy13389        291 FHCSVCFESFTQKALLNIHLRIHT  314 (617)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~~~h~  314 (617)
                      |.|+.|++.|.....|..|+++|+
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             eECCCCCcccCCHHHHHHHHHHhc
Confidence            444444444444444444444443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.87  E-value=9.3e-06  Score=48.14  Aligned_cols=27  Identities=33%  Similarity=0.738  Sum_probs=18.3

Q ss_pred             CcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566777777777777777777666654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.86  E-value=7.2e-06  Score=48.69  Aligned_cols=28  Identities=25%  Similarity=0.509  Sum_probs=18.9

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566777777777777777777666654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.86  E-value=9.9e-06  Score=48.41  Aligned_cols=29  Identities=28%  Similarity=0.616  Sum_probs=21.5

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhcCCC
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSHNVN  402 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  402 (617)
                      ++|.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            36777777777777777777777777654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.85  E-value=7.7e-06  Score=48.92  Aligned_cols=28  Identities=25%  Similarity=0.649  Sum_probs=16.5

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4556666666666666666666655543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.84  E-value=1e-05  Score=48.34  Aligned_cols=19  Identities=37%  Similarity=0.724  Sum_probs=6.8

Q ss_pred             cCCccccccCChhhHHHHH
Q psy13389        320 ACSICTESFSQKSNLYIHL  338 (617)
Q Consensus       320 ~C~~C~~~f~~~~~l~~H~  338 (617)
                      .|+.|++.|.....|..|+
T Consensus         5 ~C~~C~~~f~~~~~l~~H~   23 (30)
T 2m0d_A            5 QCDYCGRSFSDPTSKMRHL   23 (30)
T ss_dssp             ECTTTCCEESCHHHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHH
Confidence            3333333333333333333

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.83  E-value=1.1e-05  Score=48.11  Aligned_cols=27  Identities=30%  Similarity=0.488  Sum_probs=13.8

Q ss_pred             CccCCccccccCChhhHHHHHhhhcCC
Q psy13389        318 PHACSICTESFSQKSNLYIHLKLQHGV  344 (617)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  344 (617)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            445555555555555555555555443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.82  E-value=9.8e-06  Score=48.08  Aligned_cols=26  Identities=27%  Similarity=0.641  Sum_probs=13.7

Q ss_pred             CccCCccccccCChhhHHHHHhhhcC
Q psy13389        318 PHACSICTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~h~~  343 (617)
                      ||.|+.|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            45555555555555555555555544

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.81  E-value=1.6e-05  Score=57.80  Aligned_cols=40  Identities=13%  Similarity=0.269  Sum_probs=26.9

Q ss_pred             ccCCCCcccCccCCcCCCchhHHHHhhhhcCCCcccccccc
Q psy13389        370 VHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICF  410 (617)
Q Consensus       370 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  410 (617)
                      +.+++||.|..|++.|.....|..|+++|++.. ..+.+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            456677777777777777777777777777653 3444443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.80  E-value=3.4e-06  Score=51.74  Aligned_cols=30  Identities=20%  Similarity=0.424  Sum_probs=19.5

Q ss_pred             CcccCCCcccccCchhhhhhhhhhcCCCcc
Q psy13389        206 PFQCNVCYICFTNKSDLNRHSRIHNGIKPF  235 (617)
Q Consensus       206 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  235 (617)
                      ||.|+.|++.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            566666666666666666666666666554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=1.2e-05  Score=47.61  Aligned_cols=28  Identities=36%  Similarity=0.645  Sum_probs=20.6

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4677777777777777777777777654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.80  E-value=8.9e-06  Score=47.86  Aligned_cols=24  Identities=38%  Similarity=0.895  Sum_probs=11.1

Q ss_pred             CcccCccCCcCCCchhHHHHhhhh
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVS  398 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h  398 (617)
                      ||.|+.|++.|.....|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTS
T ss_pred             CccCCCCCcccCCHHHHHHHHHhc
Confidence            444444444444444444444443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.78  E-value=1.1e-05  Score=47.42  Aligned_cols=25  Identities=32%  Similarity=0.798  Sum_probs=12.5

Q ss_pred             CCccCCccccccCChhhHHHHHhhh
Q psy13389        317 KPHACSICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       317 ~~~~C~~C~~~f~~~~~l~~H~~~h  341 (617)
                      +||.|+.|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555444

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.77  E-value=1.4e-05  Score=46.52  Aligned_cols=23  Identities=35%  Similarity=0.709  Sum_probs=9.2

Q ss_pred             CcccCccccccCCHHHHHHHHHH
Q psy13389        290 PFHCSVCFESFTQKALLNIHLRI  312 (617)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~  312 (617)
                      ||.|+.|++.|.+...|..|+++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCCcChhhCCHHHHHHHHHH
Confidence            33444444444444444444333

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.77  E-value=2e-05  Score=48.07  Aligned_cols=28  Identities=25%  Similarity=0.662  Sum_probs=19.0

Q ss_pred             CCcccC--ccCCcCCCchhHHHHhhhhcCC
Q psy13389        374 KPFKCS--MCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       374 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      +||.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            566676  6777777777777777766654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.76  E-value=1.3e-05  Score=47.47  Aligned_cols=23  Identities=43%  Similarity=0.781  Sum_probs=9.3

Q ss_pred             cccCccccccCCHHHHHHHHHHh
Q psy13389        291 FHCSVCFESFTQKALLNIHLRIH  313 (617)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~~~h  313 (617)
                      |.|+.|++.|.....|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRIH   25 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHHH
T ss_pred             ccCCCCCCccCChhHHHHHHHHh
Confidence            33444444444444444444333

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.76  E-value=1.1e-05  Score=47.79  Aligned_cols=28  Identities=36%  Similarity=0.736  Sum_probs=18.8

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3566777777777777777777666654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.76  E-value=1.6e-05  Score=48.02  Aligned_cols=27  Identities=30%  Similarity=0.726  Sum_probs=16.8

Q ss_pred             CcccC--ccCCcCCCchhHHHHhhhhcCC
Q psy13389        375 PFKCS--MCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       375 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      ||.|+  .|++.|.....|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            56665  6666666666666666666554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.75  E-value=1.6e-05  Score=47.06  Aligned_cols=26  Identities=38%  Similarity=0.735  Sum_probs=14.7

Q ss_pred             CccCCccccccCChhhHHHHHhhhcC
Q psy13389        318 PHACSICTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~h~~  343 (617)
                      ||.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            45555555555555555555555544

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.74  E-value=1e-05  Score=47.21  Aligned_cols=25  Identities=16%  Similarity=0.522  Sum_probs=12.4

Q ss_pred             CCccCCccccccCChhhHHHHHhhh
Q psy13389        317 KPHACSICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       317 ~~~~C~~C~~~f~~~~~l~~H~~~h  341 (617)
                      +||.|+.|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555554443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.74  E-value=8.3e-06  Score=55.16  Aligned_cols=34  Identities=26%  Similarity=0.428  Sum_probs=17.6

Q ss_pred             hhhhcCCCcccCC--CCccccCChhHHHHHHhhccC
Q psy13389        226 SRIHNGIKPFLCS--MCAKCFSRKDDLNRHMKIHEG  259 (617)
Q Consensus       226 ~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~  259 (617)
                      ...|.+++||.|.  .|++.|.....|..|+++|.+
T Consensus        10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            3345555555553  455555555555555555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.73  E-value=1.7e-05  Score=46.09  Aligned_cols=25  Identities=44%  Similarity=0.947  Sum_probs=14.1

Q ss_pred             cccCccCCcCCCchhHHHHhhhhcC
Q psy13389        376 FKCSMCDEGFPKKSVLKEHLRVSHN  400 (617)
Q Consensus       376 ~~C~~C~~~f~~~~~l~~H~~~h~~  400 (617)
                      |.|..|++.|.....|..|+++|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            5555555555555555555555543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.90  E-value=4.6e-06  Score=49.63  Aligned_cols=27  Identities=33%  Similarity=0.700  Sum_probs=16.0

Q ss_pred             CcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            456666666666666666666655543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.90  E-value=4.6e-06  Score=48.18  Aligned_cols=24  Identities=42%  Similarity=0.887  Sum_probs=11.2

Q ss_pred             ccccccccccccChHhHHHHHHcC
Q psy13389        403 PFKCDICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       403 ~~~C~~C~~~f~~~~~l~~H~~~h  426 (617)
                      ||.|+.||+.|.+...|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            344444444444444444444443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.71  E-value=2.6e-05  Score=47.48  Aligned_cols=27  Identities=26%  Similarity=0.597  Sum_probs=13.5

Q ss_pred             CCccCC--ccccccCChhhHHHHHhhhcC
Q psy13389        317 KPHACS--ICTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       317 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  343 (617)
                      +||.|+  .|++.|.....|..|+++|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            345554  455555555555555555443

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.70  E-value=2.3e-05  Score=47.31  Aligned_cols=26  Identities=27%  Similarity=0.701  Sum_probs=12.1

Q ss_pred             CccCC--ccccccCChhhHHHHHhhhcC
Q psy13389        318 PHACS--ICTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       318 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  343 (617)
                      ||.|+  .|++.|...+.|..|+++|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            44444  444444444444444444443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.87  E-value=5.4e-06  Score=49.68  Aligned_cols=28  Identities=29%  Similarity=0.733  Sum_probs=16.6

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4566666666666666666666655543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.69  E-value=2.9e-05  Score=56.39  Aligned_cols=29  Identities=17%  Similarity=0.349  Sum_probs=13.7

Q ss_pred             CCCCccCCccccccCChhhHHHHHhhhcC
Q psy13389        315 NSKPHACSICTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       315 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  343 (617)
                      .++||+|..|++.|.....|..|+++|++
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg   38 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGV   38 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCC
Confidence            34444444444444444444444444444

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.68  E-value=2.2e-05  Score=45.60  Aligned_cols=24  Identities=33%  Similarity=0.685  Sum_probs=12.2

Q ss_pred             ccCCccccccCChhhHHHHHhhhc
Q psy13389        319 HACSICTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~h~  342 (617)
                      |.|+.|++.|.....|..|+++|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            445555555555555555554443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.85  E-value=5.8e-06  Score=49.18  Aligned_cols=23  Identities=30%  Similarity=0.735  Sum_probs=9.0

Q ss_pred             ccCCccccccCChhhHHHHHhhh
Q psy13389        319 HACSICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~h  341 (617)
                      |.|+.|++.|....+|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            33333333333333333333333

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.64  E-value=2.9e-05  Score=46.35  Aligned_cols=27  Identities=19%  Similarity=0.733  Sum_probs=17.4

Q ss_pred             CcccCccCCcCCCchhHHHH-hhhhcCC
Q psy13389        375 PFKCSMCDEGFPKKSVLKEH-LRVSHNV  401 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H-~~~h~~~  401 (617)
                      ||.|+.|++.|.....|..| +++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4566544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.80  E-value=7.4e-06  Score=49.07  Aligned_cols=25  Identities=24%  Similarity=0.636  Sum_probs=12.2

Q ss_pred             CccCCccccccCChhhHHHHHhhhc
Q psy13389        318 PHACSICTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~h~  342 (617)
                      ||.|+.|++.|.....|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            4445555555554444544444444

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.75  E-value=9.3e-06  Score=46.84  Aligned_cols=26  Identities=35%  Similarity=0.765  Sum_probs=21.4

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhc
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSH  399 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~  399 (617)
                      +||.|+.|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47888888888888888888888763

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.56  E-value=4.2e-05  Score=45.60  Aligned_cols=26  Identities=31%  Similarity=0.741  Sum_probs=13.7

Q ss_pred             CccCCccccccCChhhHHHH-HhhhcC
Q psy13389        318 PHACSICTESFSQKSNLYIH-LKLQHG  343 (617)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H-~~~h~~  343 (617)
                      ||.|+.|++.|.+...|..| +++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            45555555555555555555 344443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.26  E-value=0.00013  Score=42.95  Aligned_cols=24  Identities=29%  Similarity=0.570  Sum_probs=11.3

Q ss_pred             CccCC--ccccccCChhhHHHHHhhh
Q psy13389        318 PHACS--ICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       318 ~~~C~--~C~~~f~~~~~l~~H~~~h  341 (617)
                      ||.|+  .|++.|...+.|..|+++|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            34444  4444444444444444444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.25  E-value=0.00014  Score=42.72  Aligned_cols=25  Identities=40%  Similarity=0.696  Sum_probs=14.5

Q ss_pred             CcccC--ccccccCCHHHHHHHHHHhC
Q psy13389        290 PFHCS--VCFESFTQKALLNIHLRIHT  314 (617)
Q Consensus       290 ~~~C~--~C~~~f~~~~~l~~H~~~h~  314 (617)
                      +|.|+  .|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45555  56666666666666655554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.13  E-value=0.00063  Score=49.03  Aligned_cols=46  Identities=28%  Similarity=0.391  Sum_probs=23.6

Q ss_pred             cccccCCHHHHHHHH-HHhCCCC------CccCC--ccccccCChhhHHHHHhhh
Q psy13389        296 CFESFTQKALLNIHL-RIHTNSK------PHACS--ICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       296 C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  341 (617)
                      |++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            455555555555554 2343332      45554  4555555555555555544

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.89  E-value=0.0003  Score=68.36  Aligned_cols=56  Identities=14%  Similarity=0.215  Sum_probs=47.5

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCceEEE
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFF  568 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~  568 (617)
                      .+.+++++.|||||+||+++.|+|..+|++| |++|..||.+.    ++++++...+..++
T Consensus       237 ~~L~e~l~~ADIVIsAtg~p~~vI~~e~vk~-GavVIDVgi~r----D~d~~v~~~a~~it  292 (320)
T 1edz_A          237 DLLKKCSLDSDVVITGVPSENYKFPTEYIKE-GAVCINFACTK----NFSDDVKEKASLYV  292 (320)
T ss_dssp             HHHHHHHHHCSEEEECCCCTTCCBCTTTSCT-TEEEEECSSSC----CBCGGGGTTEEEEE
T ss_pred             hHHHHHhccCCEEEECCCCCcceeCHHHcCC-CeEEEEcCCCc----ccchhHHhhCCeeC
Confidence            4678889999999999999999999999999 99999999973    67677766665443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.70  E-value=0.0034  Score=45.14  Aligned_cols=45  Identities=27%  Similarity=0.479  Sum_probs=22.3

Q ss_pred             CCCcCCCHHHHHHHH-HhcCCCC------CcccC--ccccccCCHHHHHHHHHH
Q psy13389        268 CPKCFTRKDDLNRHM-RNHDGLK------PFHCS--VCFESFTQKALLNIHLRI  312 (617)
Q Consensus       268 C~~~f~~~~~L~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~  312 (617)
                      |++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|+++
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            444444444444444 2343322      45554  455555555555555554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.05  E-value=0.012  Score=51.95  Aligned_cols=54  Identities=24%  Similarity=0.377  Sum_probs=24.6

Q ss_pred             CCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhhcCC
Q psy13389        289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGV  344 (617)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  344 (617)
                      ++..|+.|+..+ ....|..|+...-..++-.|+.|+..|. ...|..|...+.|.
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~  162 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLA  162 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC-
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcCh
Confidence            344455554444 3334455554444444445555554443 23445555444443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.97  E-value=0.0055  Score=51.02  Aligned_cols=72  Identities=17%  Similarity=0.199  Sum_probs=36.7

Q ss_pred             CCcccCccCCcCCCchhHHHHh--hhhcCC-Cccccccc------cccccChHhHHHHHHcC---CCCCCccccccccCc
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHL--RVSHNV-NPFKCDIC------FKLFTKKSNLRTHIKTH---EPIPCDKCPEIFEKK  441 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~C------~~~f~~~~~l~~H~~~h---~~~~C~~C~~~f~~~  441 (617)
                      +++.|.+|+..|.+...+..|.  +.|... +.|.+..+      ++.+....    +...+   ..|.|.+|++.|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            4566777777777777777766  333211 22332110      11111100    11111   146677777777777


Q ss_pred             hhHHHHHh
Q psy13389        442 TDLQEHVD  449 (617)
Q Consensus       442 ~~l~~H~~  449 (617)
                      ..|..|+.
T Consensus       107 ~~~~~H~~  114 (127)
T 1zu1_A          107 VVAESHYI  114 (127)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            77777765

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.91  E-value=0.023  Score=50.16  Aligned_cols=143  Identities=17%  Similarity=0.316  Sum_probs=84.9

Q ss_pred             cccccCCCCccccCChHHHHHHHHhhcCCCCCCcCCCCCcccccCCCCcccCChHHHHHHHHhhcCCCceeccccccccC
Q psy13389         54 VKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFY  133 (617)
Q Consensus        54 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  133 (617)
                      ...+.|++|...|...                         ..+ .|+-.|-. .-+...+...    ...|+.|...+.
T Consensus        16 ~~~~~C~IC~~~~~~p-------------------------v~~-~CgH~fC~-~Ci~~~~~~~----~~~CP~Cr~~~~   64 (170)
T 3hcs_A           16 ESKYECPICLMALREA-------------------------VQT-PCGHRFCK-ACIIKSIRDA----GHKCPVDNEILL   64 (170)
T ss_dssp             CGGGBCTTTCSBCSSE-------------------------EEC-TTSCEEEH-HHHHHHHHHH----CSBCTTTCCBCC
T ss_pred             CCCCCCCCCChhhcCc-------------------------EEC-CCCCHHHH-HHHHHHHHhC----CCCCCCCccCcc
Confidence            3458899998776532                         232 36666532 2233333221    126777766655


Q ss_pred             CHH-----HHHHHHHhcCCCcceec--CccccccCChHHHHHHHHHccCCCCcccCcCccccCChHHHHHHHHhccCCCC
Q psy13389        134 VKR-----EYNRHMKIHDGVKVFLC--SVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRP  206 (617)
Q Consensus       134 ~~~-----~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  206 (617)
                      ...     .+.+-+.    .....|  ..|+..+. ...|..|.. .-.-.+..|+.|+..+ .+..|..|+...-..++
T Consensus        65 ~~~~~~~~~~~~~i~----~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~  137 (170)
T 3hcs_A           65 ENQLFPDNFAKREIL----SLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQ  137 (170)
T ss_dssp             GGGCEECHHHHHHHH----TSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCE
T ss_pred             hhhhhhhHHHHHHHh----hcccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCC
Confidence            421     1111111    234567  46776554 456777763 2334567788888877 66778888877777777


Q ss_pred             cccCCCcccccCchhhhhhhhhhcCCCcc
Q psy13389        207 FQCNVCYICFTNKSDLNRHSRIHNGIKPF  235 (617)
Q Consensus       207 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  235 (617)
                      ..|+.|+..+. ...|..|...+.|..++
T Consensus       138 ~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          138 VSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             EECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             eECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            88888888775 46778888887776543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.67  E-value=0.012  Score=48.93  Aligned_cols=26  Identities=19%  Similarity=0.521  Sum_probs=22.5

Q ss_pred             cccccCCCCccccCChHHHHHHH--Hhh
Q psy13389         54 VKKFKCNICPKRYARKNRLTNHL--RTH   79 (617)
Q Consensus        54 ~~~~~C~~C~~~f~~~~~l~~H~--~~h   79 (617)
                      .+++.|.+|+..|.+...+..|.  +.|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH   57 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKH   57 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHH
Confidence            35789999999999999999998  445

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=95.35  E-value=0.0037  Score=53.63  Aligned_cols=62  Identities=16%  Similarity=0.222  Sum_probs=47.6

Q ss_pred             cccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCc-eEEEecchhhhc
Q psy13389        506 AYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHS-SIFFDSEAAARG  576 (617)
Q Consensus       506 ~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~-~~~~d~~~~~~~  576 (617)
                      ...+..+++.++|||+++|++..|++..+|+++ |.+|..+|..    +++++    .. .+.+|++.+...
T Consensus        70 ~~~~~~~~~~~~Divi~at~~~~~~~~~~~l~~-g~~vid~~~p----~~~~~----~~~~~~~d~l~~~~~  132 (144)
T 3oj0_A           70 LINDIDSLIKNNDVIITATSSKTPIVEERSLMP-GKLFIDLGNP----PNIER----GNNVITLDEIYEISK  132 (144)
T ss_dssp             ECSCHHHHHHTCSEEEECSCCSSCSBCGGGCCT-TCEEEECCSS----CSBCC----STTSEEHHHHHHHHH
T ss_pred             eecCHHHHhcCCCEEEEeCCCCCcEeeHHHcCC-CCEEEEccCC----ccCCC----CCEEEeHHHHHHHHH
Confidence            445677788899999999999999999999999 9999999864    33554    33 255677666553

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.08  E-value=0.0059  Score=49.75  Aligned_cols=30  Identities=23%  Similarity=0.469  Sum_probs=19.2

Q ss_pred             hhhcCCCccccccccccccChHhHHHHHHc
Q psy13389        396 RVSHNVNPFKCDICFKLFTKKSNLRTHIKT  425 (617)
Q Consensus       396 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  425 (617)
                      ..|.|.++|.|..|++.|.+...|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            345566667666666666666666666654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.72  E-value=0.0073  Score=49.19  Aligned_cols=33  Identities=24%  Similarity=0.392  Sum_probs=29.0

Q ss_pred             HhhhccCCCCcccCccCCcCCCchhHHHHhhhh
Q psy13389        366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVS  398 (617)
Q Consensus       366 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  398 (617)
                      +...|+|+++|.|..|++.|.+...|..|++..
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            445688999999999999999999999998753

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.45  E-value=0.021  Score=36.83  Aligned_cols=23  Identities=22%  Similarity=0.476  Sum_probs=15.5

Q ss_pred             CCcccCccCCcCCCchhHHHHhh
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLR  396 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~  396 (617)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            35667777777777777777765

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.93  E-value=0.03  Score=36.13  Aligned_cols=23  Identities=26%  Similarity=0.397  Sum_probs=19.2

Q ss_pred             CccccccccccccChHhHHHHHH
Q psy13389        402 NPFKCDICFKLFTKKSNLRTHIK  424 (617)
Q Consensus       402 ~~~~C~~C~~~f~~~~~l~~H~~  424 (617)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            46888888888888888888887

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=92.79  E-value=0.025  Score=53.27  Aligned_cols=41  Identities=20%  Similarity=0.195  Sum_probs=36.1

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      .+.+++++.|||||+||++.. ++..+|++| |+.|.-+|.+.
T Consensus       185 ~~L~~~~~~ADIVI~Avg~p~-~I~~~~vk~-GavVIDvgi~~  225 (276)
T 3ngx_A          185 KDIGSMTRSSKIVVVAVGRPG-FLNREMVTP-GSVVIDVGINY  225 (276)
T ss_dssp             SCHHHHHHHSSEEEECSSCTT-CBCGGGCCT-TCEEEECCCEE
T ss_pred             ccHHHhhccCCEEEECCCCCc-cccHhhccC-CcEEEEeccCc
Confidence            456788999999999998765 689999999 99999999974

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=92.58  E-value=0.033  Score=52.81  Aligned_cols=41  Identities=20%  Similarity=0.209  Sum_probs=35.4

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      .+.+++++.|||||+||+.... +..+|++| |+.|.-||.+.
T Consensus       195 ~~L~~~~~~ADIVI~Avg~p~~-I~~~~vk~-GavVIDVgi~~  235 (285)
T 3p2o_A          195 KDLSLYTRQADLIIVAAGCVNL-LRSDMVKE-GVIVVDVGINR  235 (285)
T ss_dssp             SCHHHHHTTCSEEEECSSCTTC-BCGGGSCT-TEEEEECCCEE
T ss_pred             hhHHHHhhcCCEEEECCCCCCc-CCHHHcCC-CeEEEEeccCc
Confidence            3567789999999999986554 89999999 99999999873

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=92.49  E-value=0.035  Score=52.62  Aligned_cols=40  Identities=23%  Similarity=0.216  Sum_probs=35.1

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +.+++++.|||||+||+.... +..+|++| |+.|.-||.+.
T Consensus       197 ~L~~~~~~ADIVI~Avg~p~~-I~~~~vk~-GavVIDvgi~~  236 (285)
T 3l07_A          197 DLKSHTTKADILIVAVGKPNF-ITADMVKE-GAVVIDVGINH  236 (285)
T ss_dssp             SHHHHHTTCSEEEECCCCTTC-BCGGGSCT-TCEEEECCCEE
T ss_pred             hHHHhcccCCEEEECCCCCCC-CCHHHcCC-CcEEEEecccC
Confidence            567889999999999986555 89999999 99999999873

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=92.10  E-value=0.041  Score=52.15  Aligned_cols=40  Identities=30%  Similarity=0.387  Sum_probs=34.9

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      +.++.++.|||||+||+... ++..+|++| |+.|.-||.+.
T Consensus       197 ~L~~~~~~ADIVI~Avg~p~-~I~~~~vk~-GavVIDvgi~~  236 (286)
T 4a5o_A          197 DLADHVSRADLVVVAAGKPG-LVKGEWIKE-GAIVIDVGINR  236 (286)
T ss_dssp             CHHHHHHTCSEEEECCCCTT-CBCGGGSCT-TCEEEECCSCS
T ss_pred             CHHHHhccCCEEEECCCCCC-CCCHHHcCC-CeEEEEecccc
Confidence            56778899999999998655 489999999 99999999874

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.38  E-value=0.095  Score=31.67  Aligned_cols=26  Identities=19%  Similarity=0.503  Sum_probs=21.2

Q ss_pred             CCCCccccccccCchhHHHHHhhhCC
Q psy13389        428 PIPCDKCPEIFEKKTDLQEHVDKCHN  453 (617)
Q Consensus       428 ~~~C~~C~~~f~~~~~l~~H~~~~H~  453 (617)
                      .|.|++|.+.|.+...|..|....|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            47788888888888888888888786

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=90.80  E-value=0.076  Score=50.72  Aligned_cols=41  Identities=32%  Similarity=0.427  Sum_probs=35.9

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      .+..+.++.|||||+|+.+... +..+|++| |+.|.-||.+.
T Consensus       200 ~~L~~~~~~ADIVI~Avg~p~~-I~~~~vk~-GavVIDVgi~~  240 (301)
T 1a4i_A          200 AHLDEEVNKGDILVVATGQPEM-VKGEWIKP-GAIVIDCGINY  240 (301)
T ss_dssp             SSHHHHHTTCSEEEECCCCTTC-BCGGGSCT-TCEEEECCCBC
T ss_pred             ccHHHHhccCCEEEECCCCccc-CCHHHcCC-CcEEEEccCCC
Confidence            4567788999999999988664 99999999 99999999973

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=90.67  E-value=0.068  Score=50.49  Aligned_cols=41  Identities=24%  Similarity=0.239  Sum_probs=35.9

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      .+..+.++.|||||+||.+... +..+|++| |+.|.-+|...
T Consensus       195 ~~L~~~~~~ADIVI~Avg~p~~-I~~~~vk~-GavVIDVgi~r  235 (281)
T 2c2x_A          195 RDLPALTRQADIVVAAVGVAHL-LTADMVRP-GAAVIDVGVSR  235 (281)
T ss_dssp             SCHHHHHTTCSEEEECSCCTTC-BCGGGSCT-TCEEEECCEEE
T ss_pred             hHHHHHHhhCCEEEECCCCCcc-cCHHHcCC-CcEEEEccCCC
Confidence            4566788999999999998875 99999999 99999999873

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=90.28  E-value=0.068  Score=51.09  Aligned_cols=39  Identities=33%  Similarity=0.463  Sum_probs=34.3

Q ss_pred             cc--cccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        510 GE--DAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       510 ~~--~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      .+  ++++.|||||+||+... ++..+|++| |+.|.-||...
T Consensus       202 l~l~~~~~~ADIVI~Avg~p~-~I~~~~vk~-GavVIDvgi~~  242 (300)
T 4a26_A          202 EDMIDYLRTADIVIAAMGQPG-YVKGEWIKE-GAAVVDVGTTP  242 (300)
T ss_dssp             HHHHHHHHTCSEEEECSCCTT-CBCGGGSCT-TCEEEECCCEE
T ss_pred             chhhhhhccCCEEEECCCCCC-CCcHHhcCC-CcEEEEEeccC
Confidence            55  78899999999999755 589999999 99999999873

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.85  E-value=0.2  Score=30.29  Aligned_cols=28  Identities=21%  Similarity=0.474  Sum_probs=24.9

Q ss_pred             ccccCccccccccchhHHHHHhhhhcCC
Q psy13389        473 SFNCSKCLNIVRIPVEIKSLVEKLTSEG  500 (617)
Q Consensus       473 ~f~C~~C~~~f~~~~~l~~H~~~~~~~~  500 (617)
                      .|-||.|.+.|.....|..|....+..+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4999999999999999999998777554

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=89.44  E-value=0.081  Score=50.19  Aligned_cols=41  Identities=22%  Similarity=0.354  Sum_probs=35.7

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCccccccccccc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGL  550 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~  550 (617)
                      .+..+.++.|||||+|+++.. ++..+|++| |+.|.-+|.+.
T Consensus       194 ~~L~~~~~~ADIVI~Avg~p~-lI~~~~vk~-GavVIDVgi~r  234 (288)
T 1b0a_A          194 KNLRHHVENADLLIVAVGKPG-FIPGDWIKE-GAIVIDVGINR  234 (288)
T ss_dssp             SCHHHHHHHCSEEEECSCCTT-CBCTTTSCT-TCEEEECCCEE
T ss_pred             hhHHHHhccCCEEEECCCCcC-cCCHHHcCC-CcEEEEccCCc
Confidence            356678899999999998777 599999999 99999999874

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=88.45  E-value=0.13  Score=48.94  Aligned_cols=40  Identities=23%  Similarity=0.414  Sum_probs=34.3

Q ss_pred             cccccccccccceeeeccCCccchhhhhcccCcccccccccc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG  549 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~  549 (617)
                      .+..+.++.|||||+|+.... ++.++|++| |+.|.-||..
T Consensus       214 ~dl~~~~~~ADIvV~A~G~p~-~i~~d~vk~-GavVIDVGin  253 (303)
T 4b4u_A          214 QNLPELVKQADIIVGAVGKAE-LIQKDWIKQ-GAVVVDAGFH  253 (303)
T ss_dssp             SSHHHHHHTCSEEEECSCSTT-CBCGGGSCT-TCEEEECCCB
T ss_pred             CCHHHHhhcCCeEEeccCCCC-ccccccccC-CCEEEEecee
Confidence            356778899999999986554 799999999 9999999986

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=86.75  E-value=0.41  Score=27.74  Aligned_cols=24  Identities=21%  Similarity=0.618  Sum_probs=17.9

Q ss_pred             CCccccccccCchhHHHHHhhhCC
Q psy13389        430 PCDKCPEIFEKKTDLQEHVDKCHN  453 (617)
Q Consensus       430 ~C~~C~~~f~~~~~l~~H~~~~H~  453 (617)
                      .|.+|.+.|+.-.+|.+|++..|.
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            377777777777777777777664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	617
d1x7da_	340	c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomona	4e-10
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-10
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	8e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-09
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	9e-08
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	8e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-08
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-08
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	5e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	8e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	9e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	8e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	6e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	6e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.003
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.004
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.004
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	6e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	9e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	5e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.003
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	9e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	9e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	4e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	6e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	6e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.001
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	9e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	8e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	1e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	2e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	4e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	8e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	6e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	7e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	7e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.001
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	9e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	7e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	3e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.003
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.004
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	8e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.001
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	1e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	3e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.003
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	3e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.003
d2adra2	31	g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Sac	5e-04
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	7e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.001
d2epqa1	32	g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [	0.001
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.003
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.003

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} Length = 340

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

 Score = 59.7 bits (144), Expect = 4e-10
 Identities = 32/148 (21%), Positives = 63/148 (42%), Gaps = 7/148 (4%)

Query: 474 FNCSKCLNIVRIPVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATY--SSVPVL 531
               + +     P+    L+  L       ++      +A +  DI+ T T   +   ++
Sbjct: 151 LGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAYATII 210

Query: 532 KYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQVPANM-V 590
             + L+    H+NAVG      +EL A +  ++ +F + E   R E  G  +Q+PA+  V
Sbjct: 211 TPDMLEP-GMHLNAVGGDCPGKTELHADVLRNARVFVEYEPQTRIE--GEIQQLPADFPV 267

Query: 591 GEVGGLIAANLT-RDARYPLTVFHSMGV 617
            ++  ++      R +   +TVF S+G 
Sbjct: 268 VDLWRVLRGETEGRQSDSQVTVFDSVGF 295

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 9e-10
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
           K + C  C K F+ K   +RHM +H G + Y C +C K F  K  L  HM+ H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 3e-09
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIH 229
           K + C  C +SFT +S  + H+ +H G+RP+ C VC   F  K  L  H +IH
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 4e-09
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 374 KPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH 426
           K + C  C + F  KS    H+ +   + P+ C +C K F  K +L  H+K H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 8e-09
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 205 RPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIH 257
           + + C  C   FT+KS  +RH  +H G++P+ C +C K F  K  L  HMKIH
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 2e-08
 Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIH 313
           K Y C  C K FT K   +RHM  H GL+P+ C VC + F  K  L  H++IH
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 5e-08
 Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 149 KVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
           K++ C  C K+FT K + +RHM  H G++P+ C VC + F  + +L  H++IH
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-06
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLK 339
           K + C  C +SFT K+  + H+ +H   +P+ C +C + F  K +L  H+K
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 3e-06
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 92  EGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIH 145
           +  + C QC K+F  K   +RH+  H   + + C  C   F +K     HMKIH
Sbjct: 1   DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 7e-05
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 121 KVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
           K++ C+ C   F  K + +RHM +H G++ + C VC K F  K     HM+ H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 1e-04
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 11/63 (17%)

Query: 55  KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
           K + C  C K +  K++   H+  H           G   + C  C K F  K HL  H+
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHL----------GLRPYGCGVCGKKFKMKHHLVGHM 50

Query: 115 KSH 117
           K H
Sbjct: 51  KIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 3e-04
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 317 KPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRT 369
           K + C  C +SF+ KS    H+ +  G+ P+ C VC  + F+ +  L  HM+ 
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVC-GKKFKMKHHLVGHMKI 52

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 346 PFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRV 397
            + C  C  ++F  ++Q   HM    G++P+ C +C + F  K  L  H+++
Sbjct: 3   LYPCQ-C-GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.1 bits (120), Expect = 3e-09
 Identities = 16/33 (48%), Positives = 18/33 (54%)

Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIH 257
            +R   GIKPF C  C + FSR D L  H K H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.3 bits (110), Expect = 9e-08
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
             R   GIKPFQC  C  SF++  +L +H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.7 bits (106), Expect = 3e-07
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIH 229
             R   GI+PFQC  C   F+    L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (103), Expect = 8e-07
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTN 315
             R   G+KPF C  C  SF++   L +H + H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (102), Expect = 1e-06
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
             +   G K + C  C + F+R D L  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (94), Expect = 1e-05
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLK 339
             R  T  KP  C  C  SFS+  +L +H K
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (84), Expect = 3e-04
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
             +   G+K F C  C ++F+       H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (84), Expect = 3e-04
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 394 HLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH 426
             R S  + PF+C  C + F++  +L  H K H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 0.001
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRV 397
             R   G+KPF+C  CD  F +   L  H + 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (115), Expect = 2e-08
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG 203
           R        + ++C  C +SF+  S+L+ H R H G
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (113), Expect = 4e-08
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEG 259
           R        + + C  C K FS   DL++H + H G
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (108), Expect = 2e-07
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHT 314
           R        + + C  C +SF+  + L+ H R HT
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (108), Expect = 2e-07
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNG 231
                   R ++C+ C   F++ SDL++H R H G
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (104), Expect = 5e-07
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDG 287
           R        +RY C  C K F+   DL++H R H G
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (90), Expect = 4e-05
 Identities = 9/35 (25%), Positives = 14/35 (40%)

Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHG 343
                   + + C  C +SFS  S+L  H +   G
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 8e-05
 Identities = 9/36 (25%), Positives = 15/36 (41%)

Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG 175
           R        + + C  C K+F+     ++H R H G
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 4e-04
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDG 147
           R      E + ++C++C   F    + ++H + H G
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 0.001
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 366 HMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRV 397
                   + +KC  C + F   S L +H R 
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRT 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (114), Expect = 3e-08
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 228 IHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEG 259
           IH+G KP+ C  C K FSR   L +H ++H G
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHLRIHDG 203
           H G KP+ C  C ++F++ S L  H R+H G
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (104), Expect = 7e-07
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 200 IHDGIRPFQCNVCYICFTNKSDLNRHSRIHNG 231
           IH G +P+ C  C   F+  S L +H R+H G
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (102), Expect = 1e-06
 Identities = 15/32 (46%), Positives = 17/32 (53%)

Query: 256 IHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDG 287
           IH G K Y C  C K F+R   L +H R H G
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (96), Expect = 9e-06
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHT 314
           H G KP+ C  C ++F++ ++L  H R+HT
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 6e-05
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 312 IHTNSKPHACSICTESFSQKSNLYIHLKLQHG 343
           IH+  KP+ C  C ++FS+ S L  H ++  G
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 8e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 144 IHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG 175
           IH G K + C  C K F+      +H R H G
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTH 426
           P+ C  C K F++ S L  H + H
Sbjct: 7   PYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 0.002
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 91  GEGSFTCSQCPKTFVDKWHLNRHLKSHS 118
           GE  + C +C K F     L +H + H+
Sbjct: 4   GEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 0.002
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
          K + C  C K ++R + L  H R H
Sbjct: 6  KPYGCVECGKAFSRSSILVQHQRVH 30

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (112), Expect = 5e-08
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 177 KPFQCSVCSESFTQRSNLNIHLR-IHDGIRPFQCNV 211
           KP+ C  C + F++  +LN H++ +H   RP +C V
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 317 KPHACSICTESFSQKSNLYIHLKLQH-GVNPFKCDV 351
           KP+ C  C + FS+  +L  H+K  H    P KC V
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 2e-06
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 261 KRYLCTMCPKCFTRKDDLNRHMRN-HDGLKPFHCSV 295
           K Y+C  C K F+R D LN H++  H   +P  C V
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (99), Expect = 3e-06
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 233 KPFLCSMCAKCFSRKDDLNRHMK-IHEGSKRYLC 265
           KP++C  C K FSR D LN H+K +H   + + C
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 4e-06
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 289 KPFHCSVCFESFTQKALLNIHLR-IHTNSKPHACSI 323
           KP+ C  C + F++   LN H++ +HT+ +PH C +
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (97), Expect = 7e-06
 Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 205 RPFQCNVCYICFTNKSDLNRHSR-IHNGIKPFLCSM 239
           +P+ C  C   F+    LN H + +H   +P  C +
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 374 KPFKCSMCDEGFPKKSVLKEHLRVSH-NVNPFKCDI 408
           KP+ C  C +GF +   L  H++  H +  P KC +
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 6e-05
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 149 KVFLCSVCSKTFTDKVKFNRHMRA-HEGIKPFQCSV 183
           K ++C  C K F+     N H++  H   +P +C V
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 6e-04
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 346 PFKCDVCPNETFEKETQLSLHMRTVH-GVKPFKCSM 380
           P+ C  C  + F +   L+ H++ VH   +P KC +
Sbjct: 5   PYICQSC-GKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.003
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 95  FTCSQCPKTFVDKWHLNRHLKS-HSENKVFRCE 126
           + C  C K F    HLN H+K  H+  +  +C+
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (112), Expect = 5e-08
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 227 RIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
           R H G KP+ CS C K F +K  L+ H K +    
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 4e-07
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNG 231
           R H G +P+ C+ C   F  K  L+ H + ++ 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 5e-07
 Identities = 12/31 (38%), Positives = 20/31 (64%)

Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
           R H G KP+ CS C ++F Q+  L++H + +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (100), Expect = 2e-06
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query: 311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVN 345
           R HT  KP+ACS C ++F QK  L +H K  H  N
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (99), Expect = 3e-06
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSK 317
           R H G KP+ CS C ++F QK LL++H + + +  
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 6e-06
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 255 KIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
           + H G K Y C+ C K F +K  L+ H + +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 4e-04
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 368 RTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVN 402
           RT  G KP+ CS CD+ F +K +L  H +  H+ N
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 143 KIHDGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
           + H G K + CS C KTF  K   + H + +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 7e-04
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTH 426
           P+ C  C K F +K  L  H K +
Sbjct: 8   PYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.003
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 91  GEGSFTCSQCPKTFVDKWHLNRHLKSHSE 119
           GE  + CS C KTF  K  L+ H K + +
Sbjct: 5   GEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.004
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
          K + C+ C K + +K  L  H + +
Sbjct: 7  KPYACSHCDKTFRQKQLLDMHFKRY 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (102), Expect = 1e-06
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 227 RIHNGIKPFLCSMCAKCFSRKDDLNRHMKIH 257
           R H+G KP+ C +C   F++   +  H+   
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQHG 343
           R H+  KP+ C IC   F+Q   + +H+  +H 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHT 33

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 4e-06
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIH-LRIH 201
           R H G KP++C +C   FTQ   + +H L+ H
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 3e-05
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNG 231
           R H G +P++C +C+  FT    +  H    + 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHT 33

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 5e-05
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 255 KIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
           + H G K Y C +C   FT+   +  H+   
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 6e-05
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIH-LRIHT 314
           R H G KP+ C +C   FTQ   + +H L+ HT
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHT 33

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTH 426
           P++C IC   FT+   ++ HI   
Sbjct: 8   PYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.002
 Identities = 8/31 (25%), Positives = 12/31 (38%)

Query: 143 KIHDGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
           + H G K + C +C   FT       H+   
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.004
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 368 RTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSH 399
           RT  G KP++C +C   F +   +K H+   H
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDG 203
           KPFQC +C  +F++  +L  H+R H G
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.1 bits (97), Expect = 6e-06
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEG 259
           KPF C +C + FSR D L  H++ H G
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.6 bits (88), Expect = 9e-05
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 289 KPFHCSVCFESFTQKALLNIHLRIHT 314
           KPF C +C  +F++   L  H+R HT
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 205 RPFQCNVCYICFTNKSDLNRHSRIHNG 231
           +PFQC +C   F+    L  H R H G
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDG 287
           K + C +C + F+R D L  H+R H G
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.3 bits (82), Expect = 5e-04
 Identities = 12/24 (50%), Positives = 18/24 (75%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTH 426
           PF+C IC + F++  +L THI+TH
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIRTH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 12/25 (48%), Positives = 18/25 (72%)

Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
          K F+C IC + ++R + LT H+RTH
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTH 26

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDG 203
           + F C VC+ +F ++ +L  H R H  
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTN 27

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
           + F+C +C + F+R++ L RH + H   K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSK 317
           + F C VC  +F ++  L  H R HTN K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 38.8 bits (91), Expect = 3e-05
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 205 RPFQCNVCYICFTNKSDLNRHSRIHNGIK 233
           R F C VC   F  +  L RH R H   K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 37.6 bits (88), Expect = 9e-05
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLK 289
           + ++C +C + F R++ L RH R+H   K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.7 bits (83), Expect = 4e-04
 Identities = 7/24 (29%), Positives = 16/24 (66%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTH 426
            F C++C + F ++ +L+ H ++H
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSH 25

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.9 bits (81), Expect = 9e-04
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
          + F C +C + +AR+  L  H R+H
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSH 25

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.7 bits (98), Expect = 4e-06
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGS 260
            +G +PF+C +C   F+ K +  RH+K+H  +
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (96), Expect = 6e-06
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNS 316
             G +PF C +C  +FT KA    HL++HT++
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.0 bits (91), Expect = 3e-05
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
             G +PF C +C  +FT ++N   HL++H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (87), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
             G + ++C +C   FT K +  RH++ H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 6e-04
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 201 HDGIRPFQCNVCYICFTNKSDLNRHSRIH 229
             G RPF C +C   FT K++  RH ++H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 0.001
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 91  GEGSFTCSQCPKTFVDKWHLNRHLKSHSEN 120
           G+  F C  C   F  K +  RHLK H++ 
Sbjct: 4   GKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 0.002
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
             G + F+C +C   FT K    RH++ H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 7e-06
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
           K F C  C K F R D L++H+K H+  K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 7e-06
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDG 203
           K F C  C + F +  +L+ H++ H  
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQN 27

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 6e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSK 317
           K F C  C + F +   L+ H++ H N K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 9e-05
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 205 RPFQCNVCYICFTNKSDLNRHSRIHNGIK 233
           + F C  C   F     L++H + H   K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLK 289
           K++ C  CPK F R D L++H++ H   K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 8e-04
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 403 PFKCDICFKLFTKKSNLRTHIKTH 426
            F C  C K F +  +L  HIKTH
Sbjct: 2   KFACPECPKRFMRSDHLSKHIKTH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 0.001
 Identities = 13/25 (52%), Positives = 18/25 (72%)

Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
          KKF C  CPKR+ R + L+ H++TH
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 177 KPFQCSVCSESFTQRSNLNIHLRIH 201
           KP++C  C ++F+Q S L  H RIH
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 289 KPFHCSVCFESFTQKALLNIHLRIHT 314
           KP+ C  C ++F+Q + L  H RIHT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIH 257
           KP+ C  C K FS+   L  H +IH
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (81), Expect = 8e-04
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 205 RPFQCNVCYICFTNKSDLNRHSRIH 229
           +P++C  C   F+  S L  H RIH
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 179 FQCS--VCSESFTQRSNLNIHLRIHDGIRPFQC 209
           F C    C +SF  + +L  H+++H   R + C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 6e-05
 Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 263 YLCT--MCPKCFTRKDDLNRHMRNHDGLKPFHC 293
           + C    C K F  K  L  HM+ H   + + C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 7e-04
 Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 207 FQCN--VCYICFTNKSDLNRHSRIHNGIKPFLC 237
           F C    C   F  K  L  H ++H+  + ++C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 7e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 237 CSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
              C K F+ K  L  HMK+H  ++ Y+C
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 0.001
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 153 CSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
              C K+F  K     HM+ H   + + C
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 94  SFTCSQ--CPKTFVDKWHLNRHLKSHSENKVFRCE 126
           SF+C +  C K+F  K HL  H+K HS+ + + CE
Sbjct: 1   SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.002
 Identities = 8/30 (26%), Positives = 17/30 (56%)

Query: 292 HCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
               C +SF  K  L  H+++H++++ + C
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 7e-05
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSK 261
           +PF+C+   C K F+R D+L RH + H G K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 9e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDG 203
           +PF C+   C + FT+   L  H R H G
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 0.001
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 205 RPFQCNV--CYICFTNKSDLNRHSRIHNGIK 233
           RPF C    C   FT   +L RH R H G K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSK 317
           +PF C+   C + FT+   L  H R HT  K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 261 KRYLCTM--CPKCFTRKDDLNRHMRNHDGLK 289
           + ++CT   C K FTR D+L RH R H G K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 7e-05
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDG 203
           KP +C+   C +S+++  NL  HLR H G
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 3e-04
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 233 KPFLCS--MCAKCFSRKDDLNRHMKIHEG 259
           KP  C+   C K +SR ++L  H++ H G
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.003
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHT 314
           KP  C+   C +S+++   L  HLR HT
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHT 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.004
 Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 2/29 (6%)

Query: 205 RPFQCNV--CYICFTNKSDLNRHSRIHNG 231
           +P +C    C   ++   +L  H R H G
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.4 bits (89), Expect = 8e-05
 Identities = 8/45 (17%), Positives = 19/45 (42%), Gaps = 3/45 (6%)

Query: 219 KSDLNRHSRIHNGIKPFLCSMCA--KCFSRKDDLNRHMKIHEGSK 261
           +  ++++       K F C      K F R+ ++  H++ H   +
Sbjct: 4   RGSIDKY-VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (85), Expect = 2e-04
 Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 246 RKDDLNRHMKIHEGSKRYLCTMCP--KCFTRKDDLNRHMRNHDGLK 289
            +  +++++K     K + C      K F R+ ++  H++ H   +
Sbjct: 3   PRGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.1 bits (83), Expect = 5e-04
 Identities = 6/46 (13%), Positives = 20/46 (43%), Gaps = 3/46 (6%)

Query: 274 RKDDLNRHMRNHDGLKPFHCSVCFE--SFTQKALLNIHLRIHTNSK 317
            +  ++++++     K F C       +F ++  +  H++ H   +
Sbjct: 3   PRGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.9 bits (80), Expect = 0.001
 Identities = 6/45 (13%), Positives = 19/45 (42%), Gaps = 3/45 (6%)

Query: 191 RSNLNIHLRIHDGIRPFQCNVCYI--CFTNKSDLNRHSRIHNGIK 233
           R +++ +++     + F+C        F  + ++  H + H   +
Sbjct: 4   RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDG 203
           +P+ C V  C   F++ ++L  H+RIH G
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.1 bits (84), Expect = 3e-04
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 233 KPFLCS--MCAKCFSRKDDLNRHMKIHEG 259
           +P+ C    C + FSR  DL RH++IH G
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 205 RPFQCNV--CYICFTNKSDLNRHSRIHNG 231
           RP+ C V  C   F+  +DL RH RIH G
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 3e-04
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDG 203
           KPFQC+   C + F+   NL  H+RIH G
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.003
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 233 KPFLCS--MCAKCFSRKDDLNRHMKIHEG 259
           KPF C+   C K FS   +L  H++IH G
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.6 bits (82), Expect = 5e-04
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 234 PFLCSMCAKCFSRKDDLNRHM-KIHEGS 260
           P+ C +C + F+R+D L RH  KIH G+
Sbjct: 1   PYPCGLCNRAFTRRDLLIRHAQKIHSGN 28

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.2 bits (81), Expect = 7e-04
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIH 257
           KPF C +C + F+R D+  RH KIH
Sbjct: 2   KPFACDICGRKFARSDERKRHTKIH 26

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.0 bits (81), Expect = 9e-04
 Identities = 7/27 (25%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIH 201
           +P+ C    C ++F +  +L  H + H
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.6 bits (80), Expect = 0.001
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 233 KPFLCS--MCAKCFSRKDDLNRHMKIH 257
           +P+ C    C K F R  DL RH K H
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.001
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAG 82
          K + C +C  R+ RK+R++ H+R+H+  
Sbjct: 2  KPYSCPVCGLRFKRKDRMSYHVRSHDGS 29

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.003
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIH 201
           +P+ C    C++ F Q +NL  H+  H
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.003
 Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 233 KPFLCS--MCAKCFSRKDDLNRHMKIH 257
           +P++C    C K F++  +L  H+  H
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTH 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	617
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	99.88
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	99.85
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.55
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.52
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.07
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.05
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.99
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.97
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.95
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.91
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.91
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.91
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.9
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.89
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.83
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.8
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.79
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.78
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.76
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.75
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.72
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.71
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.7
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.68
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.67
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.67
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.64
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.52
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.52
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.47
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.44
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.41
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.38
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.37
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.35
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.34
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.14
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.13
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.11
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.08
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.04
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.03
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.01
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.97
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.92
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.86
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.8
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.67
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.66
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.64
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.47
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.43
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.42
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.4
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.4
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.39
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.35
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.32
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.26
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.23
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.17
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.15
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.09
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.09
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.06
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.02
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.0
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.99
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.96
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.92
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.9
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.86
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.85
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.84
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.68
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.67
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.67
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.58
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.43
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.37
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.26
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.77
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.76
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.61
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.6
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.47
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.35
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.34
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.33
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.33
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.21
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.05
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.91
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.91
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.81
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.52
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.8
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.26
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.25
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.14
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.44
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	92.39
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.05
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.97
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.91
d1y0jb1	36	U-shaped transcription factor, different fingers {	89.58
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	89.32
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	89.31
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.82
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.59
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	88.21
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.06
d1y0jb1	36	U-shaped transcription factor, different fingers {	88.0
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	87.88
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.7
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	86.56
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	85.55
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	85.12
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	84.2
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	84.17
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	84.07
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	84.02
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	82.82
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	82.29
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	80.89

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=99.88  E-value=5.7e-24  Score=207.26  Aligned_cols=130  Identities=22%  Similarity=0.323  Sum_probs=113.6

Q ss_pred             chhHHHHHhhhhcCCCCCcccccccccccccccceeeeccC--CccchhhhhcccCccccccccccccccccchhhhhcC
Q psy13389        486 PVEIKSLVEKLTSEGVPAVQAYEHGEDAARDADILVTATYS--SVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSH  563 (617)
Q Consensus       486 ~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~adiv~~~t~s--~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~  563 (617)
                      +....+....+....+..+.++.++++++++||||+|+|++  ++|+|+.+|++| |+||++||++.|+|+|||++++.+
T Consensus       163 ~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Tas~s~~Pv~~~~~l~p-G~hI~aiGs~~p~~~Eld~~~l~~  241 (340)
T d1x7da_         163 PLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAYATIITPDMLEP-GMHLNAVGGDCPGKTELHADVLRN  241 (340)
T ss_dssp             HHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSEEEEECGGGCCT-TCEEEECSCCBTTBEEECHHHHHT
T ss_pred             hHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccccCCCCcccchhhcCC-CCEEeecccchhhhhccCHHHHhc
Confidence            44555555555544456678889999999999999998854  479999999999 999999999999999999999999


Q ss_pred             ceEEEecchhhhcchhhhhhccccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        564 SSIFFDSEAAARGELKGLYEQVPANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       564 ~~~~~d~~~~~~~e~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      ++||||+++|++.| |++.+...+..++|||+|++|+.+ |.++++|||||||||
T Consensus       242 a~v~VD~~~q~~~~-ge~~~~~~~~~~~eLg~vl~g~~~gR~~~~~itvfksvG~  295 (340)
T d1x7da_         242 ARVFVEYEPQTRIE-GEIQQLPADFPVVDLWRVLRGETEGRQSDSQVTVFDSVGF  295 (340)
T ss_dssp             SEEEESSHHHHHHH-SGGGGSCTTCCCEEHHHHHTTSSCSCCCTTCCEEEECCCC
T ss_pred             CcEEEecHHHHHhh-CcccccccccccccHHHHhcCCCCCCCCCCCeEEEECCCh
Confidence            99999999999866 888776666778999999999987 999999999999997

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.85  E-value=1.6e-22  Score=198.44  Aligned_cols=111  Identities=32%  Similarity=0.454  Sum_probs=98.9

Q ss_pred             ccccccccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCceEEEecchhhhcchhhhhhc
Q psy13389        505 QAYEHGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFFDSEAAARGELKGLYEQ  584 (617)
Q Consensus       505 ~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~d~~~~~~~e~~~~~~~  584 (617)
                      .+..+..+++.+||||+|||+|++|+|+.+|++| |+||++||++.|+++|||++++.++++|||+++++. |+|++..+
T Consensus       176 ~~~~~~~~a~~~aDiV~taT~s~~P~~~~~~l~~-G~hv~~iGs~~p~~~Eld~~~~~~a~~~vdd~~~~~-~~g~~~~~  253 (320)
T d1omoa_         176 SASVQPAEEASRCDVLVTTTPSRKPVVKAEWVEE-GTHINAIGADGPGKQELDVEILKKAKIVVDDLEQAK-HGGEINVA  253 (320)
T ss_dssp             CEEECCHHHHTSSSEEEECCCCSSCCBCGGGCCT-TCEEEECSCCSTTCCCBCHHHHHTEEEEESCHHHHH-HHSTTHHH
T ss_pred             ccccchhhhhccccEEEEeccCcccccchhhcCC-CCeEeecCCccccccccCHHHhhcCceEecCHHHhh-hccchhhH
Confidence            4456778889999999999999999999999999 999999999999999999999999999999999886 56776655


Q ss_pred             c------ccccccccccccccccc-cCCCCceeeeccCCC
Q psy13389        585 V------PANMVGEVGGLIAANLT-RDARYPLTVFHSMGV  617 (617)
Q Consensus       585 ~------~~~~~~~l~~~~~~~~~-~~~~~~~~~f~~~G~  617 (617)
                      .      .+++.++||||+.|+.+ |.++++||||||+||
T Consensus       254 ~~~g~~~~~~i~~elgell~g~~~gr~~~~~itvfks~G~  293 (320)
T d1omoa_         254 VSKGVIGVEDVHATIGEVIAGLKDGRESDEEITIFDSTGL  293 (320)
T ss_dssp             HHTTSSCSTTEEEEHHHHHHTSSCCCCCSSCEEEEECCCC
T ss_pred             HHcCCCCHHHccccHHHHhcCCCCCCCCCCCeEEEECCCh
Confidence            2      23445799999999987 999999999999997

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.1e-15  Score=105.78  Aligned_cols=53  Identities=32%  Similarity=0.691  Sum_probs=47.8

Q ss_pred             CCCcccCccCCcCCCchhHHHHhhhhcCCCccccccccccccChHhHHHHHHcC
Q psy13389        373 VKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       373 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  426 (617)
                      +|||.|. ||+.|..+..|..|+++|++++||.|++||++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5789995 9999999999999999999999999999999999999999999887

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=3.6e-15  Score=103.06  Aligned_cols=53  Identities=32%  Similarity=0.676  Sum_probs=37.2

Q ss_pred             CCCcccCccccccCCHHHHHHHHHHhCCCCCccCCccccccCChhhHHHHHhhh
Q psy13389        288 LKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       288 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  341 (617)
                      ++||+|. ||+.|.....|..|+++|++++||.|++||++|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4667773 7777777777777777777777777777777777777777776654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.7e-11  Score=75.26  Aligned_cols=37  Identities=32%  Similarity=0.800  Sum_probs=30.6

Q ss_pred             CCCCcccCccCCcCCCchhHHHHhh-hhcCCCcccccc
Q psy13389        372 GVKPFKCSMCDEGFPKKSVLKEHLR-VSHNVNPFKCDI  408 (617)
Q Consensus       372 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  408 (617)
                      .+|||.|.+||++|.....|++|++ +|++++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3678888888888888888888875 688888888864

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5.1e-11  Score=74.02  Aligned_cols=34  Identities=38%  Similarity=0.927  Sum_probs=16.0

Q ss_pred             CCcccCccccccCCHHHHHHHHH-HhCCCCCccCC
Q psy13389        289 KPFHCSVCFESFTQKALLNIHLR-IHTNSKPHACS  322 (617)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  322 (617)
                      +||+|..||+.|.+...|..|++ +|++++||+|+
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            44444444444444444444443 34444444443

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=6.5e-11  Score=73.84  Aligned_cols=37  Identities=22%  Similarity=0.387  Sum_probs=26.3

Q ss_pred             HHhhhccCCCCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        365 LHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       365 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      .|+++|++++||.|+.||++|...+.|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3666777777777777777777777777777777664

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=5.1e-11  Score=74.30  Aligned_cols=35  Identities=26%  Similarity=0.464  Sum_probs=15.8

Q ss_pred             HHHhcCCCCCcccCccccccCCHHHHHHHHHHhCC
Q psy13389        281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       281 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  315 (617)
                      |+++|.+++||.|+.||++|...+.|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            33444444444444444444444444444444443

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=9e-11  Score=72.62  Aligned_cols=32  Identities=34%  Similarity=0.733  Sum_probs=15.7

Q ss_pred             hhhccCCCCcccCccCCcCCCchhHHHHhhhh
Q psy13389        367 MRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVS  398 (617)
Q Consensus       367 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  398 (617)
                      .|+|++++||.|++|+++|..++.|.+|+++|
T Consensus         3 ~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            44444555555555555555544454444444

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.7e-10  Score=69.87  Aligned_cols=34  Identities=41%  Similarity=0.807  Sum_probs=22.7

Q ss_pred             hhccCCCCcccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        368 RTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       368 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      |+|+|++||.|.+|+++|..++.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4566666666666666666666666666666654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.8e-10  Score=67.66  Aligned_cols=31  Identities=35%  Similarity=0.702  Sum_probs=15.0

Q ss_pred             hCCCCCccCCccccccCChhhHHHHHhhhcC
Q psy13389        313 HTNSKPHACSICTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       313 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  343 (617)
                      |++++||+|..||++|...++|..|+++|.|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            4444444444444444444444444444443

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.4e-10  Score=70.06  Aligned_cols=32  Identities=47%  Similarity=0.752  Sum_probs=17.2

Q ss_pred             HhCCCCCccCCccccccCChhhHHHHHhhhcC
Q psy13389        312 IHTNSKPHACSICTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       312 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  343 (617)
                      +|++++||+|.+|+++|..+++|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            45555555555555555555555555555544

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.6e-10  Score=67.16  Aligned_cols=32  Identities=38%  Similarity=0.804  Sum_probs=20.8

Q ss_pred             cCCCCCcccCccccccCCHHHHHHHHHHhCCC
Q psy13389        285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNS  316 (617)
Q Consensus       285 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  316 (617)
                      |++++||+|..|+++|.+.+.|..|+++|++|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            56666666666666666666666666666654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=3.3e-10  Score=70.00  Aligned_cols=34  Identities=32%  Similarity=0.613  Sum_probs=30.2

Q ss_pred             HhhhhcCCCccccccccccccChHhHHHHHHcCC
Q psy13389        394 HLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHE  427 (617)
Q Consensus       394 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  427 (617)
                      |.|+|++++||+|++|+++|.++++|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            6788999999999999999999999999998884

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=5.4e-10  Score=68.31  Aligned_cols=33  Identities=30%  Similarity=0.664  Sum_probs=20.8

Q ss_pred             HhCCCCCccCCccccccCChhhHHHHHhhhcCC
Q psy13389        312 IHTNSKPHACSICTESFSQKSNLYIHLKLQHGV  344 (617)
Q Consensus       312 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  344 (617)
                      +|+|++||+|++|++.|..+++|+.|++.+|++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            466666666666666666666666666555543

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1e-09  Score=67.04  Aligned_cols=33  Identities=33%  Similarity=0.753  Sum_probs=22.8

Q ss_pred             hhccCCCCcccCccCCcCCCchhHHHHhhhhcC
Q psy13389        368 RTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHN  400 (617)
Q Consensus       368 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  400 (617)
                      |+|+|++||.|++|++.|..+..|+.|++.+|+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            456777777777777777777777777665554

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=1.3e-09  Score=65.65  Aligned_cols=31  Identities=32%  Similarity=0.719  Sum_probs=17.2

Q ss_pred             ccCCCCcccCccCCcCCCchhHHHHhhhhcC
Q psy13389        370 VHGVKPFKCSMCDEGFPKKSVLKEHLRVSHN  400 (617)
Q Consensus       370 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  400 (617)
                      |+|++||.|.+|++.|..+..|++|+++|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            3455555555555555555555555555543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=1.7e-09  Score=65.20  Aligned_cols=29  Identities=45%  Similarity=0.938  Sum_probs=12.6

Q ss_pred             CCCCCcccCccccccCCHHHHHHHHHHhC
Q psy13389        286 DGLKPFHCSVCFESFTQKALLNIHLRIHT  314 (617)
Q Consensus       286 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  314 (617)
                      +|++||+|++|++.|.++..|+.|+++|+
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccC
Confidence            34444444444444444444444444443

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.76  E-value=2.1e-09  Score=61.88  Aligned_cols=27  Identities=41%  Similarity=0.787  Sum_probs=11.7

Q ss_pred             CcccCccccccCCHHHHHHHHHHhCCC
Q psy13389        290 PFHCSVCFESFTQKALLNIHLRIHTNS  316 (617)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  316 (617)
                      ||+|++|+++|.....|..|+++|+++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            344444444444444444444444443

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.75  E-value=2.2e-09  Score=61.83  Aligned_cols=29  Identities=31%  Similarity=0.728  Sum_probs=19.2

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhcCCC
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSHNVN  402 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  402 (617)
                      +||.|++|+++|...+.|++|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46666666666666666666666666653

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.72  E-value=2.1e-09  Score=61.03  Aligned_cols=28  Identities=32%  Similarity=0.797  Sum_probs=16.8

Q ss_pred             CCCcccCccCCcCCCchhHHHHhhhhcC
Q psy13389        373 VKPFKCSMCDEGFPKKSVLKEHLRVSHN  400 (617)
Q Consensus       373 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  400 (617)
                      +|||+|++|+++|..++.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3566666666666666666666666553

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=4.1e-09  Score=60.51  Aligned_cols=29  Identities=28%  Similarity=0.652  Sum_probs=21.2

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhcCCC
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSHNVN  402 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  402 (617)
                      |||.|++|+++|..++.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46777777777777777777777777664

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.70  E-value=2.9e-09  Score=60.44  Aligned_cols=25  Identities=40%  Similarity=1.046  Sum_probs=10.2

Q ss_pred             CCcccCccccccCCHHHHHHHHHHh
Q psy13389        289 KPFHCSVCFESFTQKALLNIHLRIH  313 (617)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~h  313 (617)
                      +||+|++|++.|..+..|..|+++|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~H   26 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTH   26 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCccCCCCcCEecccccccccCCCc
Confidence            3344444444444444444444443

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4.4e-09  Score=60.38  Aligned_cols=24  Identities=29%  Similarity=0.641  Sum_probs=9.2

Q ss_pred             ccCCccccccCChhhHHHHHhhhc
Q psy13389        319 HACSICTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~h~  342 (617)
                      |.|++|+++|..+++|..|+++|.
T Consensus         3 y~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           3 FACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             SCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             EECCcCCCeecchHHhhhhcCccC
Confidence            333333333333333333333333

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=4.8e-09  Score=63.79  Aligned_cols=32  Identities=31%  Similarity=0.735  Sum_probs=16.2

Q ss_pred             cccCc--cccccCCHHHHHHHHHHhCCCCCccCC
Q psy13389        291 FHCSV--CFESFTQKALLNIHLRIHTNSKPHACS  322 (617)
Q Consensus       291 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  322 (617)
                      |.|+.  |++.|.++..|+.|+++|++++||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            34443  555555555555555555555555553

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=3.4e-09  Score=64.42  Aligned_cols=32  Identities=31%  Similarity=0.802  Sum_probs=27.4

Q ss_pred             cccCc--cCCcCCCchhHHHHhhhhcCCCccccc
Q psy13389        376 FKCSM--CDEGFPKKSVLKEHLRVSHNVNPFKCD  407 (617)
Q Consensus       376 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  407 (617)
                      |.|+.  |++.|.++..|++|+++|+|++||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67876  888888888888888888888888886

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.64  E-value=2.1e-09  Score=69.99  Aligned_cols=41  Identities=15%  Similarity=0.397  Sum_probs=32.7

Q ss_pred             hHHHHHhhhccCCCCcccCc--cCCcCCCchhHHHHhhhhcCCC
Q psy13389        361 TQLSLHMRTVHGVKPFKCSM--CDEGFPKKSVLKEHLRVSHNVN  402 (617)
Q Consensus       361 ~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  402 (617)
                      ..|..|+. |++++||.|.+  |+++|...+.|+.|+++|+|++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34566664 88888888877  8888888888888888888764

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=1.2e-08  Score=56.14  Aligned_cols=25  Identities=40%  Similarity=0.766  Sum_probs=16.0

Q ss_pred             CccccccccccccChHhHHHHHHcC
Q psy13389        402 NPFKCDICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       402 ~~~~C~~C~~~f~~~~~l~~H~~~h  426 (617)
                      |||+|..|||.|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4666666666666666666666665

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=1.8e-08  Score=55.50  Aligned_cols=24  Identities=42%  Similarity=0.772  Sum_probs=10.7

Q ss_pred             CcccCccccccCCHHHHHHHHHHh
Q psy13389        290 PFHCSVCFESFTQKALLNIHLRIH  313 (617)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~h  313 (617)
                      ||+|..||++|...+.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            444444444444444444444443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.47  E-value=1.8e-08  Score=65.56  Aligned_cols=39  Identities=23%  Similarity=0.538  Sum_probs=20.6

Q ss_pred             hhhhhhhhhcCCCcccCCC--CccccCChhHHHHHHhhccCC
Q psy13389        221 DLNRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGS  260 (617)
Q Consensus       221 ~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  260 (617)
                      .|..|+. |.+++||.|.+  |++.|...+.|..|+++|+++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            3444443 55555555544  555555555555555555554

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=6.6e-08  Score=55.72  Aligned_cols=26  Identities=38%  Similarity=0.793  Sum_probs=11.5

Q ss_pred             CcccCc--cccccCCHHHHHHHHHHhCC
Q psy13389        290 PFHCSV--CFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       290 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  315 (617)
                      ||+|++  |+++|.+.+.|+.|+++|++
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            444444  44444444444444444443

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=6.9e-08  Score=55.63  Aligned_cols=28  Identities=36%  Similarity=0.764  Sum_probs=17.1

Q ss_pred             CCcccCc--cCCcCCCchhHHHHhhhhcCC
Q psy13389        374 KPFKCSM--CDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       374 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      |||.|++  |+++|...+.|++|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4566665  666666666666666666553

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=7e-08  Score=55.73  Aligned_cols=26  Identities=42%  Similarity=0.864  Sum_probs=11.4

Q ss_pred             CcccCc--cccccCCHHHHHHHHHHhCC
Q psy13389        290 PFHCSV--CFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       290 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  315 (617)
                      ||+|++  |+++|.+...|..|+++|++
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            444433  44444444444444444443

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=6.6e-08  Score=55.85  Aligned_cols=28  Identities=32%  Similarity=0.782  Sum_probs=18.9

Q ss_pred             CCcccCc--cCCcCCCchhHHHHhhhhcCC
Q psy13389        374 KPFKCSM--CDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       374 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      |||.|++  |+++|...+.|++|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4667766  777777777777777776654

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.2e-07  Score=55.25  Aligned_cols=20  Identities=40%  Similarity=0.576  Sum_probs=8.2

Q ss_pred             cccccCCHHHHHHHHHHhCC
Q psy13389        296 CFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       296 C~~~f~~~~~l~~H~~~h~~  315 (617)
                      |+++|.+.+.|..|+++|++
T Consensus        10 C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_          10 CGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCcCChhHhhhhcCcccc
Confidence            44444444444444444433

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.4e-07  Score=54.98  Aligned_cols=29  Identities=28%  Similarity=0.716  Sum_probs=18.2

Q ss_pred             CCcccC--ccCCcCCCchhHHHHhhhhcCCC
Q psy13389        374 KPFKCS--MCDEGFPKKSVLKEHLRVSHNVN  402 (617)
Q Consensus       374 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  402 (617)
                      +||.|+  .|+++|...+.|++|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            456664  36666666666666666666653

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.14  E-value=8.5e-07  Score=51.80  Aligned_cols=26  Identities=27%  Similarity=0.751  Sum_probs=13.5

Q ss_pred             CCcccCc--cCCcCCCchhHHHHhhhhc
Q psy13389        374 KPFKCSM--CDEGFPKKSVLKEHLRVSH  399 (617)
Q Consensus       374 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  399 (617)
                      +||.|++  |+++|.....|++|+++|.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4555544  5555555555555555554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=4e-07  Score=51.84  Aligned_cols=27  Identities=30%  Similarity=0.907  Sum_probs=15.3

Q ss_pred             CCcccCc--cCCcCCCchhHHHHhhhhcC
Q psy13389        374 KPFKCSM--CDEGFPKKSVLKEHLRVSHN  400 (617)
Q Consensus       374 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  400 (617)
                      |||.|++  |+++|.+...|++|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3555555  56666666666666555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.11  E-value=9.6e-07  Score=51.57  Aligned_cols=26  Identities=27%  Similarity=0.659  Sum_probs=14.2

Q ss_pred             CCccCCc--cccccCChhhHHHHHhhhc
Q psy13389        317 KPHACSI--CTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       317 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  342 (617)
                      +||.|++  |+++|...++|.+|+++|.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4555554  5555555555555555554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=6e-07  Score=51.08  Aligned_cols=25  Identities=32%  Similarity=0.846  Sum_probs=11.4

Q ss_pred             CccCCc--cccccCChhhHHHHHhhhc
Q psy13389        318 PHACSI--CTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       318 ~~~C~~--C~~~f~~~~~l~~H~~~h~  342 (617)
                      ||.|++  |+++|...++|..|+++|.
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccC
Confidence            444444  4444444444444444443

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.4e-06  Score=45.02  Aligned_cols=24  Identities=38%  Similarity=0.825  Sum_probs=12.1

Q ss_pred             cccCccCCcCCCchhHHHHhhhhc
Q psy13389        376 FKCSMCDEGFPKKSVLKEHLRVSH  399 (617)
Q Consensus       376 ~~C~~C~~~f~~~~~l~~H~~~h~  399 (617)
                      .+|+.|++.|+.+..|+.|+|.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            345555555555555555555443

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=9.1e-07  Score=49.70  Aligned_cols=24  Identities=29%  Similarity=0.837  Sum_probs=11.4

Q ss_pred             CcccCc--cCCcCCCchhHHHHhhhh
Q psy13389        375 PFKCSM--CDEGFPKKSVLKEHLRVS  398 (617)
Q Consensus       375 ~~~C~~--C~~~f~~~~~l~~H~~~h  398 (617)
                      ||.|+.  |+++|.+...|++|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            444444  444444444444444444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.1e-06  Score=49.43  Aligned_cols=25  Identities=32%  Similarity=0.764  Sum_probs=13.6

Q ss_pred             CCccCCc--cccccCChhhHHHHHhhh
Q psy13389        317 KPHACSI--CTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       317 ~~~~C~~--C~~~f~~~~~l~~H~~~h  341 (617)
                      +||.|+.  |+++|...++|+.|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            3555555  555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.97  E-value=1.8e-06  Score=46.34  Aligned_cols=25  Identities=32%  Similarity=0.842  Sum_probs=13.9

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhh
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVS  398 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h  398 (617)
                      +||.|.+||+.|......++|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.92  E-value=2.4e-06  Score=45.83  Aligned_cols=27  Identities=26%  Similarity=0.272  Sum_probs=25.1

Q ss_pred             CcccccCccccccccchhHHHHHhhhh
Q psy13389        471 EKSFNCSKCLNIVRIPVEIKSLVEKLT  497 (617)
Q Consensus       471 ~k~f~C~~C~~~f~~~~~l~~H~~~~~  497 (617)
                      ||||.|.+||+.|.++....+|.++|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999998873

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=4.5e-06  Score=43.10  Aligned_cols=21  Identities=33%  Similarity=0.835  Sum_probs=8.1

Q ss_pred             cCCccccccCChhhHHHHHhh
Q psy13389        320 ACSICTESFSQKSNLYIHLKL  340 (617)
Q Consensus       320 ~C~~C~~~f~~~~~l~~H~~~  340 (617)
                      +|+.|++-|+.+..|+.|++.
T Consensus         3 kc~~c~kcfsrkdklk~hmr~   23 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRC   23 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGG
T ss_pred             ccchhhhHhcchhHHHHHhhc
Confidence            333333333333333333333

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=7.5e-06  Score=44.47  Aligned_cols=27  Identities=37%  Similarity=0.786  Sum_probs=14.3

Q ss_pred             CCcccCccccccCCHHHHHHHHHHhCC
Q psy13389        289 KPFHCSVCFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       289 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  315 (617)
                      +||.|++|+..|..+..+..|+++|.+
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            455555555555555555555555543

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1e-05  Score=45.01  Aligned_cols=26  Identities=35%  Similarity=0.598  Sum_probs=10.2

Q ss_pred             cCccccccCCHHHHHHHHHHhCCCCC
Q psy13389        293 CSVCFESFTQKALLNIHLRIHTNSKP  318 (617)
Q Consensus       293 C~~C~~~f~~~~~l~~H~~~h~~~~~  318 (617)
                      |..||+.|.....|.+|..+|++++|
T Consensus         8 ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           8 CEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             ETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            33333333333333333333333333

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.1e-05  Score=43.83  Aligned_cols=27  Identities=30%  Similarity=0.746  Sum_probs=16.7

Q ss_pred             CCcccCccCCcCCCchhHHHHhhhhcC
Q psy13389        374 KPFKCSMCDEGFPKKSVLKEHLRVSHN  400 (617)
Q Consensus       374 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  400 (617)
                      +||.|++|+.+|..+..+.-|++.|-|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            566666666666666666666666544

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.3e-05  Score=44.63  Aligned_cols=30  Identities=40%  Similarity=0.772  Sum_probs=19.0

Q ss_pred             ceecCCCCCcCCCHHHHHHHHHhcCCCCCc
Q psy13389        262 RYLCTMCPKCFTRKDDLNRHMRNHDGLKPF  291 (617)
Q Consensus       262 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  291 (617)
                      ...|++||+.|.....|.+|...|++++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            345666666666666666666666666665

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.47  E-value=5e-05  Score=39.36  Aligned_cols=25  Identities=36%  Similarity=0.727  Sum_probs=14.2

Q ss_pred             ccCccccccCCHHHHHHHHHHhCCC
Q psy13389        292 HCSVCFESFTQKALLNIHLRIHTNS  316 (617)
Q Consensus       292 ~C~~C~~~f~~~~~l~~H~~~h~~~  316 (617)
                      +|+.|.++|.++..|+.|.+.|+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555554

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=4.9e-05  Score=40.25  Aligned_cols=25  Identities=28%  Similarity=0.737  Sum_probs=10.3

Q ss_pred             ceecCCCCCcCCCHHHHHHHHHhcC
Q psy13389        262 RYLCTMCPKCFTRKDDLNRHMRNHD  286 (617)
Q Consensus       262 ~~~C~~C~~~f~~~~~L~~H~~~h~  286 (617)
                      ||+|..|++.-.+.+.|..|++.|+
T Consensus         3 pfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           3 PFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             cceeeecccccCCchheEEeeeccc
Confidence            3444444444444444444444433

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=4e-05  Score=40.57  Aligned_cols=10  Identities=40%  Similarity=0.816  Sum_probs=3.7

Q ss_pred             hHHHHHhhhc
Q psy13389        361 TQLSLHMRTV  370 (617)
Q Consensus       361 ~~l~~H~~~h  370 (617)
                      ++|..|++.|
T Consensus        17 sqltvhlr~h   26 (29)
T d2dmda3          17 SQLTVHLRSH   26 (29)
T ss_dssp             HHHHHHHTTC
T ss_pred             hheEEeeecc
Confidence            3333333333

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=7.3e-05  Score=39.90  Aligned_cols=26  Identities=27%  Similarity=0.565  Sum_probs=12.2

Q ss_pred             cccCccccccCCHHHHHHHHHHhCCC
Q psy13389        291 FHCSVCFESFTQKALLNIHLRIHTNS  316 (617)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~~~h~~~  316 (617)
                      |.|+.||.....++.|+.|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            44444444444444444444444443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=5.9e-05  Score=41.05  Aligned_cols=25  Identities=28%  Similarity=0.794  Sum_probs=12.9

Q ss_pred             ceecCC--CCCcCCCHHHHHHHHHhcC
Q psy13389        262 RYLCTM--CPKCFTRKDDLNRHMRNHD  286 (617)
Q Consensus       262 ~~~C~~--C~~~f~~~~~L~~H~~~h~  286 (617)
                      ||.|.+  |++++...++|++|++.++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            455544  5555555555555555443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=4.3e-05  Score=41.61  Aligned_cols=27  Identities=41%  Similarity=0.851  Sum_probs=16.0

Q ss_pred             CCccCCc--cccccCChhhHHHHHhhhcC
Q psy13389        317 KPHACSI--CTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       317 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  343 (617)
                      +||.|.+  |++++...++|+.|++.+||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            3556655  66666666666666665553

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=9.9e-05  Score=39.37  Aligned_cols=26  Identities=27%  Similarity=0.668  Sum_probs=18.1

Q ss_pred             eecCCCCCcCCCHHHHHHHHHhcCCC
Q psy13389        263 YLCTMCPKCFTRKDDLNRHMRNHDGL  288 (617)
Q Consensus       263 ~~C~~C~~~f~~~~~L~~H~~~h~~~  288 (617)
                      |.|+.|+......+.|++|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            66777777777777777777777665

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.32  E-value=7.7e-05  Score=38.65  Aligned_cols=26  Identities=27%  Similarity=0.562  Sum_probs=22.7

Q ss_pred             cCCccccccCChhhHHHHHhhhcCCC
Q psy13389        320 ACSICTESFSQKSNLYIHLKLQHGVN  345 (617)
Q Consensus       320 ~C~~C~~~f~~~~~l~~H~~~h~~~~  345 (617)
                      +|+.|.++|.++..|+.|-+.|.|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            68999999999999999999888764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.26  E-value=8.3e-05  Score=37.84  Aligned_cols=23  Identities=39%  Similarity=0.878  Sum_probs=13.1

Q ss_pred             cccccccccccChHhHHHHHHcC
Q psy13389        404 FKCDICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~~h  426 (617)
                      |+|.+|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45555555555555555555555

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=8.7e-05  Score=38.95  Aligned_cols=25  Identities=32%  Similarity=0.735  Sum_probs=16.8

Q ss_pred             CccccccccccccChHhHHHHHHcC
Q psy13389        402 NPFKCDICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       402 ~~~~C~~C~~~f~~~~~l~~H~~~h  426 (617)
                      +||+|..|++.-...+.|..|+++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            5666666666666666666666666

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00012  Score=38.62  Aligned_cols=24  Identities=33%  Similarity=0.588  Sum_probs=14.8

Q ss_pred             ccCccCCcCCCchhHHHHhhhhcC
Q psy13389        377 KCSMCDEGFPKKSVLKEHLRVSHN  400 (617)
Q Consensus       377 ~C~~C~~~f~~~~~l~~H~~~h~~  400 (617)
                      .|..||+.|...+.|++|..+|++
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            466666666666666666666654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00014  Score=38.34  Aligned_cols=22  Identities=27%  Similarity=0.575  Sum_probs=9.2

Q ss_pred             CCccccccCChhhHHHHHhhhc
Q psy13389        321 CSICTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       321 C~~C~~~f~~~~~l~~H~~~h~  342 (617)
                      |..||+.|...+.|++|+..|+
T Consensus         5 c~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           5 CAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             CTTTCCEESSHHHHHHHGGGTS
T ss_pred             HHHHhHHHHHHHHHHHHhhccc
Confidence            4444444444444444444433

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00012  Score=39.02  Aligned_cols=22  Identities=41%  Similarity=0.868  Sum_probs=10.4

Q ss_pred             ccccccccccccChHhHHHHHH
Q psy13389        403 PFKCDICFKLFTKKSNLRTHIK  424 (617)
Q Consensus       403 ~~~C~~C~~~f~~~~~l~~H~~  424 (617)
                      ||.|..|..+|.++.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            3444444444444444444444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00018  Score=38.47  Aligned_cols=28  Identities=32%  Similarity=0.509  Sum_probs=22.7

Q ss_pred             CCccCCccccccCChhhHHHHHhhhcCC
Q psy13389        317 KPHACSICTESFSQKSNLYIHLKLQHGV  344 (617)
Q Consensus       317 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  344 (617)
                      +||+|..|.......++|+.|+++.|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            5788888888888888888888887753

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.06  E-value=0.00021  Score=36.31  Aligned_cols=24  Identities=42%  Similarity=0.934  Sum_probs=19.9

Q ss_pred             cccCccCCcCCCchhHHHHhhhhc
Q psy13389        376 FKCSMCDEGFPKKSVLKEHLRVSH  399 (617)
Q Consensus       376 ~~C~~C~~~f~~~~~l~~H~~~h~  399 (617)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            678888888888888888888774

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.02  E-value=0.00012  Score=38.83  Aligned_cols=24  Identities=42%  Similarity=0.802  Sum_probs=14.1

Q ss_pred             cccccc--ccccccChHhHHHHHHcC
Q psy13389        403 PFKCDI--CFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       403 ~~~C~~--C~~~f~~~~~l~~H~~~h  426 (617)
                      ||+|++  |+++|...+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            555654  666666666666665554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=9.7e-05  Score=39.39  Aligned_cols=23  Identities=30%  Similarity=0.668  Sum_probs=21.9

Q ss_pred             CCCCccccccccCchhHHHHHhh
Q psy13389        428 PIPCDKCPEIFEKKTDLQEHVDK  450 (617)
Q Consensus       428 ~~~C~~C~~~f~~~~~l~~H~~~  450 (617)
                      ||.|..|+.+|.++.+|.+||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            78999999999999999999986

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00028  Score=36.97  Aligned_cols=24  Identities=42%  Similarity=0.819  Sum_probs=10.5

Q ss_pred             CcccCccccccCCHHHHHHHHHHh
Q psy13389        290 PFHCSVCFESFTQKALLNIHLRIH  313 (617)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~h  313 (617)
                      ||+|..|...-...++|+.|+++|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            444444444444444444444443

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00032  Score=37.53  Aligned_cols=26  Identities=19%  Similarity=0.448  Sum_probs=21.0

Q ss_pred             CCCCccccccccCchhHHHHHhhhCC
Q psy13389        428 PIPCDKCPEIFEKKTDLQEHVDKCHN  453 (617)
Q Consensus       428 ~~~C~~C~~~f~~~~~l~~H~~~~H~  453 (617)
                      ||+|.+|.......++|+.|+++.|+
T Consensus         2 py~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             Cccccccccccccchhhhhhhhcccc
Confidence            67888888888888888888888776

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.92  E-value=0.00014  Score=39.90  Aligned_cols=26  Identities=35%  Similarity=0.782  Sum_probs=22.3

Q ss_pred             CCCCccccccccCchhHHHHHhhhCC
Q psy13389        428 PIPCDKCPEIFEKKTDLQEHVDKCHN  453 (617)
Q Consensus       428 ~~~C~~C~~~f~~~~~l~~H~~~~H~  453 (617)
                      ||.|.+|++.|..+..|.+|.++.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            67888888888888888888888886

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.90  E-value=0.00046  Score=36.63  Aligned_cols=27  Identities=44%  Similarity=0.951  Sum_probs=16.2

Q ss_pred             cceecCccccccCChHHHHHHHHHccC
Q psy13389        149 KVFLCSVCSKTFTDKVKFNRHMRAHEG  175 (617)
Q Consensus       149 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  175 (617)
                      ..|.|..|...|..+..|+.||..|+|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            345666666666666666666666554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00025  Score=41.83  Aligned_cols=29  Identities=17%  Similarity=0.252  Sum_probs=25.3

Q ss_pred             CCCcccccCccccccccchhHHHHHhhhh
Q psy13389        469 PKEKSFNCSKCLNIVRIPVEIKSLVEKLT  497 (617)
Q Consensus       469 ~~~k~f~C~~C~~~f~~~~~l~~H~~~~~  497 (617)
                      +|-|||.|..|+|.|.+++++.+|...-.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C~   29 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSCT   29 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhhh
Confidence            37799999999999999999999976443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.00028  Score=41.65  Aligned_cols=24  Identities=29%  Similarity=0.897  Sum_probs=17.4

Q ss_pred             CCCccccccccccccChHhHHHHH
Q psy13389        400 NVNPFKCDICFKLFTKKSNLRTHI  423 (617)
Q Consensus       400 ~~~~~~C~~C~~~f~~~~~l~~H~  423 (617)
                      |.+||.|.+|+|.|.++..+.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            567777777777777777777775

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.84  E-value=0.00047  Score=36.58  Aligned_cols=28  Identities=39%  Similarity=0.720  Sum_probs=20.3

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCC
Q psy13389         93 GSFTCSQCPKTFVDKWHLNRHLKSHSEN  120 (617)
Q Consensus        93 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  120 (617)
                      ..|.|..|...|..+-.|+.||.+|+++
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4577777777777777777777777653

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.68  E-value=0.00075  Score=39.77  Aligned_cols=24  Identities=33%  Similarity=0.779  Sum_probs=11.0

Q ss_pred             ceecCCCCCcCCCHHHHHHHHHhc
Q psy13389        262 RYLCTMCPKCFTRKDDLNRHMRNH  285 (617)
Q Consensus       262 ~~~C~~C~~~f~~~~~L~~H~~~h  285 (617)
                      .|.|.+|++.|.+..+|--||+.|
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTT
T ss_pred             ccCCCCCCCccCCcccccchHhhh
Confidence            344444444444444444444444

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.67  E-value=0.00066  Score=40.00  Aligned_cols=28  Identities=32%  Similarity=0.660  Sum_probs=19.9

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCC
Q psy13389         93 GSFTCSQCPKTFVDKWHLNRHLKSHSEN  120 (617)
Q Consensus        93 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  120 (617)
                      +.|.|.+|++.|.+.++|--|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4577777777777777777777777543

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00046  Score=36.87  Aligned_cols=27  Identities=41%  Similarity=0.704  Sum_probs=17.0

Q ss_pred             CCccCCccccccCChhhHHHHHhhhcC
Q psy13389        317 KPHACSICTESFSQKSNLYIHLKLQHG  343 (617)
Q Consensus       317 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  343 (617)
                      +||+|..|.....+.++|..|++.-|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            366666666666666666666665554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.58  E-value=0.00081  Score=35.64  Aligned_cols=17  Identities=24%  Similarity=0.483  Sum_probs=7.1

Q ss_pred             cccccCCHHHHHHHHHH
Q psy13389        296 CFESFTQKALLNIHLRI  312 (617)
Q Consensus       296 C~~~f~~~~~l~~H~~~  312 (617)
                      |++.|..++.|++|.++
T Consensus        11 cdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2          11 CDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CCCEESSHHHHHHHHHH
T ss_pred             ccccccCHHHHhhhhhc
Confidence            44444444444444433

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.43  E-value=0.00063  Score=37.26  Aligned_cols=26  Identities=15%  Similarity=0.278  Sum_probs=24.3

Q ss_pred             ccccCccccccccchhHHHHHhhhhc
Q psy13389        473 SFNCSKCLNIVRIPVEIKSLVEKLTS  498 (617)
Q Consensus       473 ~f~C~~C~~~f~~~~~l~~H~~~~~~  498 (617)
                      ||.|.+|++.|.+++.|-+|...+++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            79999999999999999999998874

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.37  E-value=0.00066  Score=34.47  Aligned_cols=23  Identities=43%  Similarity=0.847  Sum_probs=11.7

Q ss_pred             CCCCccccccccCchhHHHHHhh
Q psy13389        428 PIPCDKCPEIFEKKTDLQEHVDK  450 (617)
Q Consensus       428 ~~~C~~C~~~f~~~~~l~~H~~~  450 (617)
                      ||+|.-|+..|..+.+|+.|+.+
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            34555555555555555555443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.001  Score=35.47  Aligned_cols=23  Identities=35%  Similarity=0.745  Sum_probs=10.2

Q ss_pred             CcccCccCCcCCCchhHHHHhhh
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRV  397 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~  397 (617)
                      ||+|.+|...-...++|..|++.
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHH
Confidence            34444444444444444444443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.77  E-value=0.0029  Score=32.08  Aligned_cols=22  Identities=41%  Similarity=0.815  Sum_probs=14.3

Q ss_pred             CcccCccccccCCHHHHHHHHH
Q psy13389        290 PFHCSVCFESFTQKALLNIHLR  311 (617)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~  311 (617)
                      ||+|+.|...|.++..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            5666666666666666666653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0018  Score=35.48  Aligned_cols=21  Identities=29%  Similarity=0.722  Sum_probs=9.4

Q ss_pred             CcccCc--cCCcCCCchhHHHHh
Q psy13389        375 PFKCSM--CDEGFPKKSVLKEHL  395 (617)
Q Consensus       375 ~~~C~~--C~~~f~~~~~l~~H~  395 (617)
                      ||.|.+  |.|.|+..+.-.+|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444444  444444444444443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.0023  Score=33.43  Aligned_cols=25  Identities=32%  Similarity=0.727  Sum_probs=15.8

Q ss_pred             CCCccccccccCchhHHHHHhhhCC
Q psy13389        429 IPCDKCPEIFEKKTDLQEHVDKCHN  453 (617)
Q Consensus       429 ~~C~~C~~~f~~~~~l~~H~~~~H~  453 (617)
                      |+|+.|+..-..+++|+.|++..|+
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccCCcchhheeehhhhhHHhhhccc
Confidence            5566666666666666666666553

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.60  E-value=0.0033  Score=33.40  Aligned_cols=28  Identities=32%  Similarity=0.666  Sum_probs=19.6

Q ss_pred             CCcccCc--cCCcCCCchhHHHHhhhhcCC
Q psy13389        374 KPFKCSM--CDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       374 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      +||.|..  |.+.|.+-..|.+|...|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4666754  777777777777777777653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.0037  Score=34.16  Aligned_cols=26  Identities=38%  Similarity=0.884  Sum_probs=15.0

Q ss_pred             CCcccCC--CcccccCchhhhhhh-hhhc
Q psy13389        205 RPFQCNV--CYICFTNKSDLNRHS-RIHN  230 (617)
Q Consensus       205 ~~~~C~~--C~~~f~~~~~L~~H~-~~h~  230 (617)
                      +||.|++  |.+.|++.+.-..|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            3566655  666666666666664 4443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.35  E-value=0.0045  Score=32.20  Aligned_cols=23  Identities=35%  Similarity=0.780  Sum_probs=15.1

Q ss_pred             CCCCccccccccCchhHHHHHhh
Q psy13389        428 PIPCDKCPEIFEKKTDLQEHVDK  450 (617)
Q Consensus       428 ~~~C~~C~~~f~~~~~l~~H~~~  450 (617)
                      ||+|..||+.|..+.+|..|..+
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            46666677776666666666544

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0043  Score=32.55  Aligned_cols=23  Identities=35%  Similarity=0.543  Sum_probs=13.7

Q ss_pred             cccccccccccChHhHHHHHHcC
Q psy13389        404 FKCDICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~~h  426 (617)
                      -+|+.|.++..++..|+.|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            35666666666666666666555

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.33  E-value=0.0046  Score=32.85  Aligned_cols=26  Identities=38%  Similarity=0.816  Sum_probs=16.2

Q ss_pred             ccccCC--CCcccCChHHHHHHHHhhcC
Q psy13389         94 SFTCSQ--CPKTFVDKWHLNRHLKSHSE  119 (617)
Q Consensus        94 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  119 (617)
                      ||.|..  |.+.|.+...|.+|..+|++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            455543  66666666666666666654

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.33  E-value=0.0045  Score=32.23  Aligned_cols=22  Identities=41%  Similarity=0.756  Sum_probs=18.4

Q ss_pred             ccccccccccccChHhHHHHHH
Q psy13389        403 PFKCDICFKLFTKKSNLRTHIK  424 (617)
Q Consensus       403 ~~~C~~C~~~f~~~~~l~~H~~  424 (617)
                      ||+|..||+.+-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6888888888888888888864

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.21  E-value=0.0046  Score=31.47  Aligned_cols=21  Identities=48%  Similarity=1.116  Sum_probs=12.7

Q ss_pred             cccccccccccChHhHHHHHH
Q psy13389        404 FKCDICFKLFTKKSNLRTHIK  424 (617)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~  424 (617)
                      |.|+.|-+.|+++.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            556666666666666666654

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.05  E-value=0.0046  Score=31.47  Aligned_cols=24  Identities=33%  Similarity=0.710  Sum_probs=22.6

Q ss_pred             CCCccccccccCchhHHHHHhhhC
Q psy13389        429 IPCDKCPEIFEKKTDLQEHVDKCH  452 (617)
Q Consensus       429 ~~C~~C~~~f~~~~~l~~H~~~~H  452 (617)
                      |+|++|-+.|..+.++..|++..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999999999876

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.0069  Score=31.74  Aligned_cols=25  Identities=36%  Similarity=0.612  Sum_probs=22.3

Q ss_pred             CcccCccCCcCCCchhHHHHhhhhc
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSH  399 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~  399 (617)
                      |-+|+.|..+.+++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4579999999999999999999984

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.0082  Score=34.87  Aligned_cols=26  Identities=38%  Similarity=0.676  Sum_probs=12.2

Q ss_pred             CCCccc--CccccccCCHHHHHHHHHHh
Q psy13389        288 LKPFHC--SVCFESFTQKALLNIHLRIH  313 (617)
Q Consensus       288 ~~~~~C--~~C~~~f~~~~~l~~H~~~h  313 (617)
                      ++||.|  +-|+.+|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            344555  23444454444444444444

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.81  E-value=0.011  Score=34.26  Aligned_cols=26  Identities=27%  Similarity=0.640  Sum_probs=14.8

Q ss_pred             CCCccC--CccccccCChhhHHHHHhhh
Q psy13389        316 SKPHAC--SICTESFSQKSNLYIHLKLQ  341 (617)
Q Consensus       316 ~~~~~C--~~C~~~f~~~~~l~~H~~~h  341 (617)
                      ++||.|  +-|+.+|.+...|..|.+.|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            456666  33666666666666655544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.52  E-value=0.012  Score=30.72  Aligned_cols=23  Identities=30%  Similarity=0.765  Sum_probs=15.6

Q ss_pred             cccccccccccChHhHHHHHHcC
Q psy13389        404 FKCDICFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~~h  426 (617)
                      |+|+.|+..-.+++.|+.|++.-
T Consensus         3 ~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHT
T ss_pred             ccCCcchhheeehhhhhHHhhhc
Confidence            66777777777777777776543

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.80  E-value=0.018  Score=35.15  Aligned_cols=25  Identities=20%  Similarity=0.494  Sum_probs=20.1

Q ss_pred             CcccCccCCcCCCchhHHHHhhhhc
Q psy13389        375 PFKCSMCDEGFPKKSVLKEHLRVSH  399 (617)
Q Consensus       375 ~~~C~~C~~~f~~~~~l~~H~~~h~  399 (617)
                      .|.|.+|+|.|.....|++|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4788888888888888888877663

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.26  E-value=0.029  Score=34.19  Aligned_cols=24  Identities=33%  Similarity=0.670  Sum_probs=18.0

Q ss_pred             ceecCCCCCcCCCHHHHHHHHHhc
Q psy13389        262 RYLCTMCPKCFTRKDDLNRHMRNH  285 (617)
Q Consensus       262 ~~~C~~C~~~f~~~~~L~~H~~~h  285 (617)
                      .|.|..|+|.|+....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            467777888887777777777666

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.25  E-value=0.016  Score=48.47  Aligned_cols=54  Identities=15%  Similarity=0.218  Sum_probs=41.0

Q ss_pred             cccccccccceeeeccCCccchhhhhcccCccccccccccccccccchhhhhcCceEEE
Q psy13389        510 GEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAGLNHHSELDAAIYSHSSIFF  568 (617)
Q Consensus       510 ~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~  568 (617)
                      .++.+..||||++|++.....+..+|+++ |+.|.-+|...    ..++++...|..++
T Consensus        91 lk~~~~~aDIvIsavG~p~~~i~~d~ik~-GavvIDvGi~~----~~~~~v~~~a~~iT  144 (171)
T d1edza1          91 LKKCSLDSDVVITGVPSENYKFPTEYIKE-GAVCINFACTK----NFSDDVKEKASLYV  144 (171)
T ss_dssp             HHHHHHHCSEEEECCCCTTCCBCTTTSCT-TEEEEECSSSC----CBCGGGGTTEEEEE
T ss_pred             HhhccccCCEEEEccCCCccccChhhccc-CceEeeccccc----ccccchhheeeEEc
Confidence            44455679999999998887799999999 99999999762    34455555555443

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.14  E-value=0.025  Score=31.48  Aligned_cols=26  Identities=27%  Similarity=0.816  Sum_probs=17.3

Q ss_pred             CCCCccccccccCchhHHHHHhhhCC
Q psy13389        428 PIPCDKCPEIFEKKTDLQEHVDKCHN  453 (617)
Q Consensus       428 ~~~C~~C~~~f~~~~~l~~H~~~~H~  453 (617)
                      .|.|..||+.|..+..+.+|-..+-+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            36677777777777777777665443

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.44  E-value=0.061  Score=28.46  Aligned_cols=26  Identities=27%  Similarity=0.577  Sum_probs=18.6

Q ss_pred             cccCccCCcCCCchhHHHHhhhhcCC
Q psy13389        376 FKCSMCDEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       376 ~~C~~C~~~f~~~~~l~~H~~~h~~~  401 (617)
                      |.|..||+...+...++.|+...|+.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             eechhHHHHHhhccCceEEEeecccC
Confidence            67777777777777777777665543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=92.39  E-value=0.028  Score=46.73  Aligned_cols=60  Identities=13%  Similarity=0.234  Sum_probs=43.1

Q ss_pred             ccccccccccccccceeeeccCCccchhhhhccc--------CccccccccccccccccchhhhhcCceEEE
Q psy13389        505 QAYEHGEDAARDADILVTATYSSVPVLKYEWLKK--------KDAHINAVGAGLNHHSELDAAIYSHSSIFF  568 (617)
Q Consensus       505 ~~~~~~~~~~~~adiv~~~t~s~~p~~~~~~~~~--------~g~~v~~~g~~~~~~~e~~~~~~~~~~~~~  568 (617)
                      ....+..+++..+||||+||++..|++..+++++        ++..|.-+|..    +.+++.+-....|.+
T Consensus        73 ~~~~~~~~~l~~~Divi~atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavP----r~vd~~v~~~~~v~l  140 (159)
T d1gpja2          73 VRFDELVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANP----RDVEEGVENIEDVEV  140 (159)
T ss_dssp             CCGGGHHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSS----CSBCTTGGGSTTEEE
T ss_pred             ccchhHHHHhccCCEEEEecCCCCccccHhhhHHHHHhcccCCCeEEEeecCC----CCcChhhhccCCeEE
Confidence            3456778888999999999999999999998853        23456666543    457777655444443

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.05  E-value=0.057  Score=30.04  Aligned_cols=26  Identities=27%  Similarity=0.512  Sum_probs=16.8

Q ss_pred             CcccCccccccCCHHHHHHHHHHhCC
Q psy13389        290 PFHCSVCFESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       290 ~~~C~~C~~~f~~~~~l~~H~~~h~~  315 (617)
                      .|.|+.|++.|.....+.+|...-++
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            46677777777777777666655443

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.97  E-value=0.055  Score=29.21  Aligned_cols=28  Identities=32%  Similarity=0.587  Sum_probs=18.9

Q ss_pred             CCcccCc--cccccCCHHHHHHHHHHhCCC
Q psy13389        289 KPFHCSV--CFESFTQKALLNIHLRIHTNS  316 (617)
Q Consensus       289 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  316 (617)
                      +.|.|+.  |+..|+....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            3466643  777777777777777777664

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.91  E-value=0.09  Score=29.76  Aligned_cols=20  Identities=20%  Similarity=0.200  Sum_probs=14.5

Q ss_pred             CCcCCCchhHHHHhhhhcCC
Q psy13389        382 DEGFPKKSVLKEHLRVSHNV  401 (617)
Q Consensus       382 ~~~f~~~~~l~~H~~~h~~~  401 (617)
                      ++.|..+..|..|||+|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45677777777777777764

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.58  E-value=0.15  Score=28.04  Aligned_cols=23  Identities=26%  Similarity=0.655  Sum_probs=15.1

Q ss_pred             CceecCCCCCcCCCHHHHHHHHH
Q psy13389        261 KRYLCTMCPKCFTRKDDLNRHMR  283 (617)
Q Consensus       261 ~~~~C~~C~~~f~~~~~L~~H~~  283 (617)
                      .+|.|.-||-.|.+.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            35667777777777777766653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=89.32  E-value=0.062  Score=43.99  Aligned_cols=50  Identities=18%  Similarity=0.173  Sum_probs=38.8

Q ss_pred             cccccccccccceeeeccCCccchhh---hhcccCccccccccccccccccchhhhhc
Q psy13389        508 EHGEDAARDADILVTATYSSVPVLKY---EWLKKKDAHINAVGAGLNHHSELDAAIYS  562 (617)
Q Consensus       508 ~~~~~~~~~adiv~~~t~s~~p~~~~---~~~~~~g~~v~~~g~~~~~~~e~~~~~~~  562 (617)
                      ...++|+..+|||||||.... +|..   .-+|. |+.|..+|...   .||+.+.+.
T Consensus        70 ~~~~~a~~~aDi~vTaTGn~~-vI~~~h~~~MKd-gaIl~N~GHfd---~EIdv~~L~  122 (163)
T d1v8ba1          70 VTLDEIVDKGDFFITCTGNVD-VIKLEHLLKMKN-NAVVGNIGHFD---DEIQVNELF  122 (163)
T ss_dssp             CCHHHHTTTCSEEEECCSSSS-SBCHHHHTTCCT-TCEEEECSSTT---TSBCHHHHH
T ss_pred             CchhHccccCcEEEEcCCCCc-cccHHHHHHhhC-CeEEEeccccc---hhhhhHHHH
Confidence            578899999999999998765 3443   34578 99999999974   478876654

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.31  E-value=0.19  Score=26.56  Aligned_cols=20  Identities=25%  Similarity=0.539  Sum_probs=9.1

Q ss_pred             cccCccccccCCHHHHHHHH
Q psy13389        291 FHCSVCFESFTQKALLNIHL  310 (617)
Q Consensus       291 ~~C~~C~~~f~~~~~l~~H~  310 (617)
                      |.|..||+...+...++.|+
T Consensus         3 ftc~hcgkqlks~~gmkyhv   22 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEE
Confidence            34444444444444444443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.82  E-value=0.12  Score=27.05  Aligned_cols=18  Identities=44%  Similarity=0.940  Sum_probs=9.5

Q ss_pred             ccccccChHhHHHHHHcC
Q psy13389        409 CFKLFTKKSNLRTHIKTH  426 (617)
Q Consensus       409 C~~~f~~~~~l~~H~~~h  426 (617)
                      |++.|...+.+++|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            555555555555555444

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.59  E-value=0.12  Score=35.20  Aligned_cols=24  Identities=21%  Similarity=0.538  Sum_probs=19.6

Q ss_pred             cccccCCCCccccCChHHHHHHHH
Q psy13389         54 VKKFKCNICPKRYARKNRLTNHLR   77 (617)
Q Consensus        54 ~~~~~C~~C~~~f~~~~~l~~H~~   77 (617)
                      ...|-|..|++.|.+...|..|++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCEEecccccCccCCHHHHHHHHc
Confidence            345888889999998888888875

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.21  E-value=0.12  Score=29.27  Aligned_cols=18  Identities=33%  Similarity=0.643  Sum_probs=9.9

Q ss_pred             cccCCHHHHHHHHHHhCC
Q psy13389        298 ESFTQKALLNIHLRIHTN  315 (617)
Q Consensus       298 ~~f~~~~~l~~H~~~h~~  315 (617)
                      +.|.....|..|+++|++
T Consensus        15 ~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHC
T ss_pred             CcchhHHHHHHHHhhcCC
Confidence            345555555555555554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.06  E-value=0.16  Score=27.36  Aligned_cols=26  Identities=31%  Similarity=0.839  Sum_probs=16.9

Q ss_pred             ccccCC--CCcccCChHHHHHHHHhhcC
Q psy13389         94 SFTCSQ--CPKTFVDKWHLNRHLKSHSE  119 (617)
Q Consensus        94 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  119 (617)
                      .|.|..  |+..|...+.|..|+-.|++
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            455643  77777777777777766655

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.00  E-value=0.15  Score=27.98  Aligned_cols=23  Identities=30%  Similarity=0.429  Sum_probs=17.3

Q ss_pred             CCccCCccccccCChhhHHHHHh
Q psy13389        317 KPHACSICTESFSQKSNLYIHLK  339 (617)
Q Consensus       317 ~~~~C~~C~~~f~~~~~l~~H~~  339 (617)
                      ..|.|+-||-.|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            34778888888888888887763

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.88  E-value=0.21  Score=30.21  Aligned_cols=26  Identities=42%  Similarity=0.809  Sum_probs=14.1

Q ss_pred             CCccCCccccccCChhhHHHHHhhhc
Q psy13389        317 KPHACSICTESFSQKSNLYIHLKLQH  342 (617)
Q Consensus       317 ~~~~C~~C~~~f~~~~~l~~H~~~h~  342 (617)
                      .|-.|++|+....+..+|++|+..-|
T Consensus        23 qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            34555555555555555555555444

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.70  E-value=0.15  Score=26.94  Aligned_cols=26  Identities=31%  Similarity=0.809  Sum_probs=19.1

Q ss_pred             CCC--ccccccccCchhHHHHHhhhCCC
Q psy13389        429 IPC--DKCPEIFEKKTDLQEHVDKCHNL  454 (617)
Q Consensus       429 ~~C--~~C~~~f~~~~~l~~H~~~~H~~  454 (617)
                      |.|  +.|...|.++.++++|..+.|++
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfhn~   30 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFHNI   30 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHTTT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhccC
Confidence            455  35888888888888888877763

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=86.56  E-value=0.073  Score=43.95  Aligned_cols=39  Identities=23%  Similarity=0.377  Sum_probs=33.4

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCcccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG  549 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~  549 (617)
                      +..+.++.||||++|+. ...++..+|+++ |+.|.-+|..
T Consensus        73 ~l~~~~~~ADivI~a~G-~p~~i~~~~vk~-g~vvIDvGi~  111 (166)
T d1b0aa1          73 NLRHHVENADLLIVAVG-KPGFIPGDWIKE-GAIVIDVGIN  111 (166)
T ss_dssp             CHHHHHHHCSEEEECSC-CTTCBCTTTSCT-TCEEEECCCE
T ss_pred             hhHHHHhhhhHhhhhcc-CcccccccccCC-CcEEEecCce
Confidence            45667889999999997 456789999999 9999999975

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.55  E-value=0.15  Score=34.68  Aligned_cols=29  Identities=17%  Similarity=0.261  Sum_probs=25.5

Q ss_pred             CCCCCCcccccCccccccccchhHHHHHh
Q psy13389        466 FDAPKEKSFNCSKCLNIVRIPVEIKSLVE  494 (617)
Q Consensus       466 ~~~~~~k~f~C~~C~~~f~~~~~l~~H~~  494 (617)
                      .+.+|...|-|-.|++.|.+...|..|.+
T Consensus         8 ~D~pG~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1           8 PDLPGGGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCCCCEEecccccCccCCHHHHHHHHc
Confidence            35667788999999999999999999975

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.12  E-value=0.19  Score=29.54  Aligned_cols=12  Identities=25%  Similarity=0.681  Sum_probs=5.5

Q ss_pred             CCCCcccCccCC
Q psy13389        372 GVKPFKCSMCDE  383 (617)
Q Consensus       372 ~~~~~~C~~C~~  383 (617)
                      ++.|-.|++|+.
T Consensus        17 g~~P~~CPvCg~   28 (37)
T d1nnqa2          17 DEAPEYCPVCGA   28 (37)
T ss_dssp             SCCCSBCTTTCC
T ss_pred             CCCCCcCCCCCC
Confidence            334445555543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.20  E-value=0.13  Score=42.64  Aligned_cols=39  Identities=33%  Similarity=0.495  Sum_probs=33.0

Q ss_pred             ccccccccccceeeeccCCccchhhhhcccCcccccccccc
Q psy13389        509 HGEDAARDADILVTATYSSVPVLKYEWLKKKDAHINAVGAG  549 (617)
Q Consensus       509 ~~~~~~~~adiv~~~t~s~~p~~~~~~~~~~g~~v~~~g~~  549 (617)
                      +..+.++.||||++|+... -+++.+|+++ |+.|..+|..
T Consensus        75 ~l~~~~~~aDivi~a~G~~-~~i~~~~vk~-g~iviDvgi~  113 (170)
T d1a4ia1          75 HLDEEVNKGDILVVATGQP-EMVKGEWIKP-GAIVIDCGIN  113 (170)
T ss_dssp             SHHHHHTTCSEEEECCCCT-TCBCGGGSCT-TCEEEECCCB
T ss_pred             cHHHHHhhccchhhccccc-cccccccccC-CCeEeccCcc
Confidence            4456788999999999774 4588999999 9999999986

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=84.17  E-value=0.53  Score=28.38  Aligned_cols=25  Identities=20%  Similarity=0.519  Sum_probs=13.1

Q ss_pred             CCceecCCCCCcCCCHHHHHHHHHh
Q psy13389        260 SKRYLCTMCPKCFTRKDDLNRHMRN  284 (617)
Q Consensus       260 ~~~~~C~~C~~~f~~~~~L~~H~~~  284 (617)
                      +.|-.|++|+.......+|++|+..
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHH
Confidence            3445555555555555555555543

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=84.07  E-value=0.24  Score=28.88  Aligned_cols=12  Identities=33%  Similarity=0.625  Sum_probs=5.8

Q ss_pred             CCCCcccCccCC
Q psy13389        372 GVKPFKCSMCDE  383 (617)
Q Consensus       372 ~~~~~~C~~C~~  383 (617)
                      ++.|-+|++|+.
T Consensus        17 g~~Pe~CPvCg~   28 (36)
T d1yuza2          17 GEDFEKCPICFR   28 (36)
T ss_dssp             SSCCSBCTTTCC
T ss_pred             CCCCCcCCCCCC
Confidence            344445555543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.02  E-value=0.37  Score=25.17  Aligned_cols=18  Identities=28%  Similarity=0.798  Sum_probs=10.4

Q ss_pred             CCCcCCCHHHHHHHHHhc
Q psy13389        268 CPKCFTRKDDLNRHMRNH  285 (617)
Q Consensus       268 C~~~f~~~~~L~~H~~~h  285 (617)
                      |.+.|.+.+.+++|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            555566555555555554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.82  E-value=0.22  Score=33.12  Aligned_cols=37  Identities=22%  Similarity=0.570  Sum_probs=23.6

Q ss_pred             cccccCCCCccccCChHHHHHHHHhhcCCCCCCcCCCCCcccccCCCCcc
Q psy13389         54 VKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKT  103 (617)
Q Consensus        54 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~C~~C~~~  103 (617)
                      ...|+|+.|+++|.....+.- +.            .....|.|..|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L-~d------------~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL-FD------------PMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH-EE------------TTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh-cC------------cCCCeEEecCCCCE
Confidence            456888888888876665443 11            13456888888754

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=82.29  E-value=0.37  Score=24.72  Aligned_cols=15  Identities=27%  Similarity=0.731  Sum_probs=6.4

Q ss_pred             cccccCChhhHHHHH
Q psy13389        324 CTESFSQKSNLYIHL  338 (617)
Q Consensus       324 C~~~f~~~~~l~~H~  338 (617)
                      |++.|.....|+.|+
T Consensus         9 c~kafkkhnqlkvhq   23 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQ   23 (28)
T ss_dssp             CCCEESSHHHHHHHH
T ss_pred             chHHHhhccceEEEe
Confidence            444444444444443

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.89  E-value=0.4  Score=31.79  Aligned_cols=38  Identities=29%  Similarity=0.562  Sum_probs=21.9

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcCCCceeccccccc
Q psy13389         91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFD  131 (617)
Q Consensus        91 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  131 (617)
                      ....|.|+.|+++|.....++.   .-.....|.|..|+-.
T Consensus        11 ~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             cCCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            3456778888877765544332   2233345677776543