Psyllid ID: psy1348

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-------
Protein Sequence
MACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVTYEEFKCHCL
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHEcccHHHEEEEEEcccccccccccHHHHHHHHHHHccccEEEccccHHHHHHcHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
macglagglsGLISWALIMPfdvvkstlqsdsltdpkykgMFDCFRKNYRQYGWTFFFRGIsittirafpvNYIMFVTYEEFKCHCL
Flexible Loop (DISEMBL)
MACGLAGGLSGLISWALIMPFDVVKStlqsdsltdpkyKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVTYEEFKCHCL
Low Complexity Region (SEG)
MACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVTYEEFKCHCL
Disordered region (IsUnstruct)
**CGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVTYEEFKCHC*
Disordered Region (DISOPRED)
MACGLAGGLSGLISWALIMPFDVVKSTLQSDSL**PKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVTYEEFKCHCL
Disordered Region (DISEMBL)
MACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVTYEEFKCHCL
Disordered Region (DISPRO)
MACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVTYEEFKCHCL
Transmembrane Helix (TMHMM)
iHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVTYEEFKCHCL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	87	2.2.26 [Sep-21-2011]
Q08DK7	298	Mitochondrial carnitine/a	yes	N/A	0.850	0.248	0.52	4e-17
Q5HZE0	306	Mitochondrial carnitine/a	yes	N/A	0.850	0.241	0.52	4e-17
Q8N8R3	303	Mitochondrial carnitine/a	yes	N/A	0.850	0.244	0.52	5e-17
Q8BL03	306	Mitochondrial carnitine/a	yes	N/A	0.850	0.241	0.52	5e-17
Q6ZT89	311	Solute carrier family 25	no	N/A	0.712	0.199	0.481	6e-17
Q8BW66	306	Solute carrier family 25	no	N/A	0.862	0.245	0.468	7e-17
Q3MHI3	311	Solute carrier family 25	no	N/A	0.862	0.241	0.468	1e-16
Q8CFJ7	288	Solute carrier family 25	no	N/A	0.827	0.25	0.473	3e-16
Q6DHS9	309	Solute carrier family 25	yes	N/A	0.827	0.233	0.5	2e-15
Q8N413	288	Solute carrier family 25	no	N/A	0.827	0.25	0.460	2e-15

>sp|Q08DK7|MCATL_BOVIN Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 1/75 (1%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
           LAGG SG+ SW    P DVVKS LQ+D L   P+Y+G+ DC +++YR+ GW  F RG++ 
Sbjct: 194 LAGGTSGIASWLSTYPVDVVKSRLQADGLQGAPRYRGIVDCVQQSYREEGWRVFTRGLAS 253

Query: 64  TTIRAFPVNYIMFVT 78
           T +RAFPVN   F T
Sbjct: 254 TLLRAFPVNAATFAT 268

Has palmitoylcarnitine transporting activity.
Bos taurus (taxid: 9913)

>sp|Q5HZE0|MCATL_RAT Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Rattus norvegicus GN=Slc25a29 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 1/75 (1%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLT-DPKYKGMFDCFRKNYRQYGWTFFFRGISI 63
           LAGG SG+ SW    P DVVKS LQ+D L   P+Y+G+ DC R++Y+  GW  F RG++ 
Sbjct: 194 LAGGTSGITSWLSTYPMDVVKSRLQADGLQGTPRYRGIVDCMRQSYQAEGWQVFTRGLAS 253

Query: 64  TTIRAFPVNYIMFVT 78
           T +RAFPVN   F T
Sbjct: 254 TLLRAFPVNAATFAT 268

Has palmitoylcarnitine transporting activity.

Rattus norvegicus (taxid: 10116)

>sp|Q8N8R3|MCATL_HUMAN Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Homo sapiens GN=SLC25A29 PE=2 SV=2

 Score = 86.7 bits (213), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 1/75 (1%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
           LAGG SG++SW    P DVVKS LQ+D L   P+Y+G+ DC  ++YR  GW  F RG++ 
Sbjct: 194 LAGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWRVFTRGLAS 253

Query: 64  TTIRAFPVNYIMFVT 78
           T +RAFPVN   F T
Sbjct: 254 TLLRAFPVNAATFAT 268

Has palmitoylcarnitine transporting activity.

Homo sapiens (taxid: 9606)

>sp|Q8BL03|MCATL_MOUSE Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Mus musculus GN=Slc25a29 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 1/75 (1%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLT-DPKYKGMFDCFRKNYRQYGWTFFFRGISI 63
           LAGG SG+ SW    P DVVKS LQ+D L   P+Y+G+ DC R++Y+  GW  F RG++ 
Sbjct: 194 LAGGTSGITSWLSTYPMDVVKSRLQADGLQGTPRYRGIVDCMRQSYQAEGWQVFTRGLAS 253

Query: 64  TTIRAFPVNYIMFVT 78
           T +RAFPVN   F T
Sbjct: 254 TLLRAFPVNAATFAT 268

Has palmitoylcarnitine transporting activity.

Mus musculus (taxid: 10090)

>sp|Q6ZT89|S2548_HUMAN Solute carrier family 25 member 48 OS=Homo sapiens GN=SLC25A48 PE=2 SV=2

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/79 (48%), Positives = 53/79 (67%)

Query: 2   ACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
           A  LAGG++G ISW    P DVVKS LQ+D +   KYKG+ DC  ++Y++ G   FFRGI
Sbjct: 218 AVWLAGGMAGAISWGTATPMDVVKSRLQADGVYLNKYKGVLDCISQSYQKEGLKVFFRGI 277

Query: 62  SITTIRAFPVNYIMFVTYE 80
           ++  +R FP++  MF+ YE
Sbjct: 278 TVNAVRGFPMSAAMFLGYE 296

Homo sapiens (taxid: 9606)

>sp|Q8BW66|S2548_MOUSE Solute carrier family 25 member 48 OS=Mus musculus GN=Slc25a48 PE=2 SV=2

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 54/79 (68%)

Query: 2   ACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
           A  LAGG++G ISW    P DVVKS +Q+D +   KY+G+ DC  ++Y+Q G+  FFRGI
Sbjct: 213 AAWLAGGIAGAISWGTATPMDVVKSRIQADGVYLNKYRGVVDCISQSYQQEGFKVFFRGI 272

Query: 62  SITTIRAFPVNYIMFVTYE 80
           ++  +R FP++  MF+ YE
Sbjct: 273 TVNAVRGFPMSAAMFLGYE 291

Mus musculus (taxid: 10090)

>sp|Q3MHI3|S2548_BOVIN Solute carrier family 25 member 48 OS=Bos taurus GN=SLC25A48 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/79 (46%), Positives = 53/79 (67%)

Query: 2   ACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
           A  LAGG++G ISW    P DVVKS LQ+D +   KY+G+ DC  ++Y++ G   FFRGI
Sbjct: 218 AVWLAGGMAGAISWGTATPMDVVKSRLQADGVYVNKYRGVLDCMSQSYQKEGLKVFFRGI 277

Query: 62  SITTIRAFPVNYIMFVTYE 80
           ++  +R FP++  MF+ YE
Sbjct: 278 TVNAVRGFPMSAAMFLGYE 296

Bos taurus (taxid: 9913)

>sp|Q8CFJ7|S2545_MOUSE Solute carrier family 25 member 45 OS=Mus musculus GN=Slc25a45 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 50/76 (65%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISIT 64
           +AGG +G+ SW    PFDV+KS +Q D L   KY GM DC   ++RQ G   FF+G+++ 
Sbjct: 206 VAGGFAGIASWITATPFDVIKSRMQMDGLKGRKYGGMLDCMASSFRQEGIGVFFKGMTLN 265

Query: 65  TIRAFPVNYIMFVTYE 80
           + RAFPVN   F++YE
Sbjct: 266 SARAFPVNAATFLSYE 281

Mus musculus (taxid: 10090)

>sp|Q6DHS9|S2548_DANRE Solute carrier family 25 member 48 OS=Danio rerio GN=slc25a48 PE=2 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 49/76 (64%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISIT 64
           LAGGL+G ISW    P DVVKS LQ+D++   KYKG+  C  ++YR  G   FFRG ++ 
Sbjct: 225 LAGGLAGSISWVTATPSDVVKSRLQADAMHQRKYKGILHCIMQSYRTEGIHVFFRGATVN 284

Query: 65  TIRAFPVNYIMFVTYE 80
            IR FP+   MF+ YE
Sbjct: 285 AIRGFPMCATMFLGYE 300

Danio rerio (taxid: 7955)

>sp|Q8N413|S2545_HUMAN Solute carrier family 25 member 45 OS=Homo sapiens GN=SLC25A45 PE=2 SV=2

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/76 (46%), Positives = 49/76 (64%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISIT 64
           +AGG +G+ SW    P D++KS +Q D L    Y+GM DC   + RQ G   FFRG++I 
Sbjct: 206 VAGGFAGIASWVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTIN 265

Query: 65  TIRAFPVNYIMFVTYE 80
           + RAFPVN + F++YE
Sbjct: 266 SARAFPVNAVTFLSYE 281

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
91086183	291	PREDICTED: similar to solute carrier fam	0.781	0.233	0.506	3e-17
328702626	560	PREDICTED: mitochondrial aspartate-gluta	0.931	0.144	0.493	4e-17
328726254	281	PREDICTED: solute carrier family 25 memb	0.931	0.288	0.493	4e-17
390469505	316	PREDICTED: mitochondrial carnitine/acylc	0.850	0.234	0.533	3e-16
344265525	420	PREDICTED: solute carrier family 25 memb	0.908	0.188	0.493	4e-16
403302007	237	PREDICTED: mitochondrial carnitine/acylc	0.850	0.312	0.533	4e-16
149737656	306	PREDICTED: mitochondrial carnitine/acylc	0.850	0.241	0.533	5e-16
311261583	310	PREDICTED: mitochondrial carnitine/acylc	0.850	0.238	0.533	5e-16
301754327	318	PREDICTED: putative mitochondrial carrie	0.908	0.248	0.493	6e-16
402877173	306	PREDICTED: mitochondrial carnitine/acylc	0.850	0.241	0.533	6e-16

>gi|91086183|ref|XP_971102.1| PREDICTED: similar to solute carrier family 25, member 45 [Tribolium castaneum] gi|270010233|gb|EFA06681.1| hypothetical protein TcasGA2_TC009611 [Tribolium castaneum]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 55/81 (67%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISIT 64
           +AGG +G+ SW L++PFDVVKS +Q+DS   P+YKGM DCF K+Y++ G   FF+G    
Sbjct: 210 IAGGTAGVASWILVIPFDVVKSRIQADSYNHPQYKGMIDCFYKSYQRDGLGIFFKGAPAI 269

Query: 65  TIRAFPVNYIMFVTYEEFKCH 85
            +R FPVN  +FV YE    H
Sbjct: 270 VMRTFPVNAALFVGYEAVLRH 290

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328702626|ref|XP_003241958.1| PREDICTED: mitochondrial aspartate-glutamate transporter AGC1-like [Acyrthosiphon pisum]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 2/83 (2%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISIT 64
           ++GG++G++SW L++PFDV+KS + +DS T P YKG +DC +K Y + G   F RG  + 
Sbjct: 459 MSGGVAGVLSWVLVLPFDVIKSKIITDSFTQPVYKGAWDCAKKTYNKGGAISFLRGFRLL 518

Query: 65  TIRAFPVNYIMFVTYEEF--KCH 85
            IRAFPVN I F TYE    +CH
Sbjct: 519 CIRAFPVNGIAFATYEAIISRCH 541

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328726254|ref|XP_003248818.1| PREDICTED: solute carrier family 25 member 45-like, partial [Acyrthosiphon pisum]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 2/83 (2%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISIT 64
           ++GG++G++SW L++PFDV+KS + +DS T P YKG +DC +K Y + G   F RG  + 
Sbjct: 180 MSGGVAGVLSWVLVLPFDVIKSKIITDSFTQPVYKGAWDCAKKTYNKGGAISFLRGFRLL 239

Query: 65  TIRAFPVNYIMFVTYEEF--KCH 85
            IRAFPVN I F TYE    +CH
Sbjct: 240 CIRAFPVNGIAFATYEAIISRCH 262

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390469505|ref|XP_003734126.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein CACL [Callithrix jacchus]

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 1/75 (1%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
           LAGG SG++SW    P DVVKS LQ+D L   P+Y+G+ DC R++YR  GW  F RG++ 
Sbjct: 207 LAGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVRQSYRAEGWRVFTRGLAS 266

Query: 64  TTIRAFPVNYIMFVT 78
           T +RAFPVN   F T
Sbjct: 267 TLLRAFPVNAATFAT 281

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|344265525|ref|XP_003404834.1| PREDICTED: solute carrier family 25 member 48-like [Loxodonta africana]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/79 (49%), Positives = 53/79 (67%)

Query: 2   ACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
           A  LAGG++G ISW    P DVVKS LQ+D +   KYKG+ DC  ++YR+ G   FFRGI
Sbjct: 327 AVWLAGGMAGAISWGTATPMDVVKSRLQADGVYFSKYKGVLDCISQSYREEGLKVFFRGI 386

Query: 62  SITTIRAFPVNYIMFVTYE 80
           ++  +R FP++  MF+ YE
Sbjct: 387 TVNAVRGFPMSAAMFLGYE 405

Source: Loxodonta africana

Species: Loxodonta africana

Genus: Loxodonta

Family: Elephantidae

Order: Proboscidea

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403302007|ref|XP_003941661.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein CACL isoform 1 [Saimiri boliviensis boliviensis] gi|403302009|ref|XP_003941662.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein CACL isoform 2 [Saimiri boliviensis boliviensis] gi|403302011|ref|XP_003941663.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein CACL isoform 3 [Saimiri boliviensis boliviensis]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 1/75 (1%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
           LAGG SG++SW    P DVVKS LQ+D L   P+Y+G+ DC R++YR  GW  F RG++ 
Sbjct: 128 LAGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVRQSYRAEGWRVFTRGLAS 187

Query: 64  TTIRAFPVNYIMFVT 78
           T +RAFPVN   F T
Sbjct: 188 TLLRAFPVNAATFAT 202

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|149737656|ref|XP_001487916.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein CACL-like [Equus caballus]

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 1/75 (1%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
           LAGG SG++SW    P DVVKS LQ+D L   P+Y+G+ DC R++YR  GW  F RG++ 
Sbjct: 194 LAGGTSGILSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVRQSYRAEGWRVFTRGLAS 253

Query: 64  TTIRAFPVNYIMFVT 78
           T +RAFPVN   F T
Sbjct: 254 TLLRAFPVNAATFAT 268

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|311261583|ref|XP_003128771.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein CACL-like [Sus scrofa]

 Score = 88.6 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 1/75 (1%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
           LAGG SG++SW    P DVVKS LQ+D L   P+Y+G+ DC R++YR  GW  F RG++ 
Sbjct: 201 LAGGTSGIMSWLSTYPVDVVKSRLQADGLRGAPRYQGILDCVRQSYRAEGWRVFTRGLAS 260

Query: 64  TTIRAFPVNYIMFVT 78
           T +RAFPVN   F T
Sbjct: 261 TLLRAFPVNAATFAT 275

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301754327|ref|XP_002913014.1| PREDICTED: putative mitochondrial carrier protein FLJ44862-like [Ailuropoda melanoleuca]

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/79 (49%), Positives = 54/79 (68%)

Query: 2   ACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
           A  LAGG++G ISW    P DVVKS LQ+D +   KYKG+ DC  ++Y++ G   FFRGI
Sbjct: 225 AVWLAGGMAGAISWGTATPMDVVKSRLQADGVYLNKYKGVLDCISQSYQKEGLKVFFRGI 284

Query: 62  SITTIRAFPVNYIMFVTYE 80
           ++ T+R FP++  MF+ YE
Sbjct: 285 TVNTVRGFPMSAAMFLGYE 303

Source: Ailuropoda melanoleuca

Species: Ailuropoda melanoleuca

Genus: Ailuropoda

Family: Ursidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|402877173|ref|XP_003902313.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein CACL [Papio anubis]

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 1/75 (1%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
           LAGG SG++SW    P DVVKS LQ+D L   P+Y+G+ DC R++YR  GW  F RG++ 
Sbjct: 194 LAGGTSGIMSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVRQSYRAEGWRVFTRGLAS 253

Query: 64  TTIRAFPVNYIMFVT 78
           T +RAFPVN   F T
Sbjct: 254 TLLRAFPVNAATFAT 268

Source: Papio anubis

Species: Papio anubis

Genus: Papio

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
UNIPROTKB|F1SAP1	303	SLC25A29 "Uncharacterized prot	0.850	0.244	0.533	5.3e-17
UNIPROTKB|Q8N8R3	303	SLC25A29 "Mitochondrial carnit	0.850	0.244	0.52	8.6e-17
UNIPROTKB|A3KMR5	237	SLC25A29 "SLC25A29 protein" [H	0.850	0.312	0.52	8.6e-17
MGI|MGI:2145373	306	Slc25a48 "solute carrier famil	0.908	0.258	0.468	8.6e-17
UNIPROTKB|Q08DK7	298	SLC25A29 "Mitochondrial carnit	0.850	0.248	0.52	1.1e-16
MGI|MGI:2444911	306	Slc25a29 "solute carrier famil	0.850	0.241	0.52	1.4e-16
RGD|1308104	306	Slc25a29 "solute carrier famil	0.850	0.241	0.52	1.4e-16
UNIPROTKB|J9NU55	311	SLC25A48 "Uncharacterized prot	0.908	0.254	0.481	1.4e-16
UNIPROTKB|J3KQI1	257	SLC25A48 "Solute carrier famil	0.908	0.307	0.481	1.4e-16
UNIPROTKB|Q6ZT89	311	SLC25A48 "Solute carrier famil	0.908	0.254	0.481	1.4e-16

UNIPROTKB|F1SAP1 SLC25A29 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 40/75 (53%), Positives = 51/75 (68%)

Query:     5 LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
             LAGG SG++SW    P DVVKS LQ+D L   P+Y+G+ DC R++YR  GW  F RG++ 
Sbjct:   194 LAGGTSGIMSWLSTYPVDVVKSRLQADGLRGAPRYQGILDCVRQSYRAEGWRVFTRGLAS 253

Query:    64 TTIRAFPVNYIMFVT 78
             T +RAFPVN   F T
Sbjct:   254 TLLRAFPVNAATFAT 268

GO:0015227 "acyl carnitine transmembrane transporter activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8N8R3 SLC25A29 "Mitochondrial carnitine/acylcarnitine carrier protein CACL" [Homo sapiens (taxid:9606)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 39/75 (52%), Positives = 50/75 (66%)

Query:     5 LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
             LAGG SG++SW    P DVVKS LQ+D L   P+Y+G+ DC  ++YR  GW  F RG++ 
Sbjct:   194 LAGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWRVFTRGLAS 253

Query:    64 TTIRAFPVNYIMFVT 78
             T +RAFPVN   F T
Sbjct:   254 TLLRAFPVNAATFAT 268

GO:0016021 "integral to membrane" evidence=IEA

GO:0015227 "acyl carnitine transmembrane transporter activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

UNIPROTKB|A3KMR5 SLC25A29 "SLC25A29 protein" [Homo sapiens (taxid:9606)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 39/75 (52%), Positives = 50/75 (66%)

Query:     5 LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
             LAGG SG++SW    P DVVKS LQ+D L   P+Y+G+ DC  ++YR  GW  F RG++ 
Sbjct:   128 LAGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWRVFTRGLAS 187

Query:    64 TTIRAFPVNYIMFVT 78
             T +RAFPVN   F T
Sbjct:   188 TLLRAFPVNAATFAT 202

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0015227 "acyl carnitine transmembrane transporter activity" evidence=IEA

MGI|MGI:2145373 Slc25a48 "solute carrier family 25, member 48" [Mus musculus (taxid:10090)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 37/79 (46%), Positives = 54/79 (68%)

Query:     2 ACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
             A  LAGG++G ISW    P DVVKS +Q+D +   KY+G+ DC  ++Y+Q G+  FFRGI
Sbjct:   213 AAWLAGGIAGAISWGTATPMDVVKSRIQADGVYLNKYRGVVDCISQSYQQEGFKVFFRGI 272

Query:    62 SITTIRAFPVNYIMFVTYE 80
             ++  +R FP++  MF+ YE
Sbjct:   273 TVNAVRGFPMSAAMFLGYE 291

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q08DK7 SLC25A29 "Mitochondrial carnitine/acylcarnitine carrier protein CACL" [Bos taurus (taxid:9913)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 39/75 (52%), Positives = 51/75 (68%)

Query:     5 LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
             LAGG SG+ SW    P DVVKS LQ+D L   P+Y+G+ DC +++YR+ GW  F RG++ 
Sbjct:   194 LAGGTSGIASWLSTYPVDVVKSRLQADGLQGAPRYRGIVDCVQQSYREEGWRVFTRGLAS 253

Query:    64 TTIRAFPVNYIMFVT 78
             T +RAFPVN   F T
Sbjct:   254 TLLRAFPVNAATFAT 268

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0015227 "acyl carnitine transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2444911 Slc25a29 "solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29" [Mus musculus (taxid:10090)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 39/75 (52%), Positives = 50/75 (66%)

Query:     5 LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
             LAGG SG+ SW    P DVVKS LQ+D L   P+Y+G+ DC R++Y+  GW  F RG++ 
Sbjct:   194 LAGGTSGITSWLSTYPMDVVKSRLQADGLQGTPRYRGIVDCMRQSYQAEGWQVFTRGLAS 253

Query:    64 TTIRAFPVNYIMFVT 78
             T +RAFPVN   F T
Sbjct:   254 TLLRAFPVNAATFAT 268

GO:0005739 "mitochondrion" evidence=IDA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006844 "acyl carnitine transport" evidence=IDA

GO:0015227 "acyl carnitine transmembrane transporter activity" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IDA

RGD|1308104 Slc25a29 "solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29" [Rattus norvegicus (taxid:10116)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 39/75 (52%), Positives = 50/75 (66%)

Query:     5 LAGGLSGLISWALIMPFDVVKSTLQSDSLTD-PKYKGMFDCFRKNYRQYGWTFFFRGISI 63
             LAGG SG+ SW    P DVVKS LQ+D L   P+Y+G+ DC R++Y+  GW  F RG++ 
Sbjct:   194 LAGGTSGITSWLSTYPMDVVKSRLQADGLQGTPRYRGIVDCMRQSYQAEGWQVFTRGLAS 253

Query:    64 TTIRAFPVNYIMFVT 78
             T +RAFPVN   F T
Sbjct:   254 TLLRAFPVNAATFAT 268

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006844 "acyl carnitine transport" evidence=ISO

GO:0015227 "acyl carnitine transmembrane transporter activity" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISO

UNIPROTKB|J9NU55 SLC25A48 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 38/79 (48%), Positives = 53/79 (67%)

Query:     2 ACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
             A  LAGG++G ISW    P DVVKS LQ+D +   KYKG+ DC  ++Y++ G   FFRGI
Sbjct:   218 AVWLAGGMAGAISWGTATPMDVVKSRLQADGVYLNKYKGVLDCISQSYQKEGLKVFFRGI 277

Query:    62 SITTIRAFPVNYIMFVTYE 80
             ++  +R FP++  MF+ YE
Sbjct:   278 TVNAVRGFPMSAAMFLGYE 296

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|J3KQI1 SLC25A48 "Solute carrier family 25 member 48" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 38/79 (48%), Positives = 53/79 (67%)

Query:     2 ACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
             A  LAGG++G ISW    P DVVKS LQ+D +   KYKG+ DC  ++Y++ G   FFRGI
Sbjct:   164 AVWLAGGMAGAISWGTATPMDVVKSRLQADGVYLNKYKGVLDCISQSYQKEGLKVFFRGI 223

Query:    62 SITTIRAFPVNYIMFVTYE 80
             ++  +R FP++  MF+ YE
Sbjct:   224 TVNAVRGFPMSAAMFLGYE 242

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q6ZT89 SLC25A48 "Solute carrier family 25 member 48" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 38/79 (48%), Positives = 53/79 (67%)

Query:     2 ACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
             A  LAGG++G ISW    P DVVKS LQ+D +   KYKG+ DC  ++Y++ G   FFRGI
Sbjct:   218 AVWLAGGMAGAISWGTATPMDVVKSRLQADGVYLNKYKGVLDCISQSYQKEGLKVFFRGI 277

Query:    62 SITTIRAFPVNYIMFVTYE 80
             ++  +R FP++  MF+ YE
Sbjct:   278 TVNAVRGFPMSAAMFLGYE 296

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8N8R3	MCATL_HUMAN	No assigned EC number	0.52	0.8505	0.2442	yes	N/A
Q08DK7	MCATL_BOVIN	No assigned EC number	0.52	0.8505	0.2483	yes	N/A
Q5HZE0	MCATL_RAT	No assigned EC number	0.52	0.8505	0.2418	yes	N/A
Q8BL03	MCATL_MOUSE	No assigned EC number	0.52	0.8505	0.2418	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	87
pfam00153	96	pfam00153, Mito_carr, Mitochondrial carrier protei	2e-23
PTZ00169	300	PTZ00169, PTZ00169, ADP/ATP transporter on adenyla	3e-08
PTZ00169	300	PTZ00169, PTZ00169, ADP/ATP transporter on adenyla	2e-06
PTZ00169	300	PTZ00169, PTZ00169, ADP/ATP transporter on adenyla	8e-04

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein

 Score = 85.0 bits (211), Expect = 2e-23
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 2  ACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDP-KYKGMFDCFRKNYRQYGWTFFFRG 60
          A  LAGG++G I+  +  P DVVK+ LQS +     KYKG+ DCF+K Y++ G    ++G
Sbjct: 7  ASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYKG 66

Query: 61 ISITTIRAFPVNYIMFVTYEEFK 83
          +    +R  P   I F TYE  K
Sbjct: 67 LLPNLLRVAPAAAIYFGTYETLK 89

Length = 96

>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional

 Score = 48.6 bits (116), Expect = 3e-08
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 7/86 (8%)

Query: 5  LAGGLSGLISWALIMPFDVVKSTLQS-DSLTD------PKYKGMFDCFRKNYRQYGWTFF 57
          L GG+S  IS   + P + VK  +Q+ DS+ +      P+Y G+ +CFR+  ++ G    
Sbjct: 12 LMGGISAAISKTAVAPIERVKMLIQTQDSIPEIKSGKVPRYSGIVNCFRRVSKEQGVLSL 71

Query: 58 FRGISITTIRAFPVNYIMFVTYEEFK 83
          +RG +   IR FP     F   + FK
Sbjct: 72 WRGNTANVIRYFPTQAFNFAFKDYFK 97

Length = 300

>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional

 Score = 43.2 bits (102), Expect = 2e-06
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSD--SLTDPKYKGMFDCFRKNYRQYGWTFFFRG-- 60
           L+GGL+G  S  ++ P D  ++ L SD     D ++ G+FDC  K  +Q G+   ++G  
Sbjct: 118 LSGGLAGASSLLIVYPLDFARTRLASDIGKGGDREFTGLFDCLMKISKQTGFLSLYQGFG 177

Query: 61  ISITTI 66
           +S+  I
Sbjct: 178 VSVQGI 183

Length = 300

>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional

 Score = 35.9 bits (83), Expect = 8e-04
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 9/79 (11%)

Query: 9   LSGLISWALIMPFDVVKSTLQSDS----LTDPKYKGMFDCFRKNYRQYGWTFFFRGISIT 64
           L+GLIS+    PFD V+  +   S     ++ +Y G  DC++K  +  G   FF+G    
Sbjct: 223 LAGLISY----PFDTVRRRMMMMSGRKAKSEIQYTGTLDCWKKILKNEGLGGFFKGAWAN 278

Query: 65  TIRAFPVNYIMFVTYEEFK 83
            +R      ++ V Y+E +
Sbjct: 279 VLRGAG-GALVLVFYDELQ 296

Length = 300

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	87
1okc_A	297	Structure Of Mitochondrial AdpATP CARRIER IN COMPLE		3e-06

>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 5  LAGGLSGLISWALIMPFDVVKSTLQSDSLT-----DPKYKGMFDCFRKNYRQYGWTFFFR 59
          LAGG++  IS   + P + VK  LQ    +     + +YKG+ DC  +  ++ G+  F+R
Sbjct: 12 LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 71
Query: 60 GISITTIRAFPVNYIMFVTYEEFK 83
          G     IR FP   + F   +++K
Sbjct: 72 GNLANVIRYFPTQALNFAFKDKYK 95

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	87
2lck_A	303	Mitochondrial uncoupling protein 2; membrane prote	3e-19
2lck_A	303	Mitochondrial uncoupling protein 2; membrane prote	1e-17
2lck_A	303	Mitochondrial uncoupling protein 2; membrane prote	2e-10
1okc_A	297	ADP, ATP carrier protein heart isoform T1; mitocho	2e-16
1okc_A	297	ADP, ATP carrier protein heart isoform T1; mitocho	2e-15
1okc_A	297	ADP, ATP carrier protein heart isoform T1; mitocho	4e-14

>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303

 Score = 78.5 bits (194), Expect = 3e-19
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISIT 64
            +   +G  +  +  P DVVK+   + +L   +Y     C     R+ G   F++G   +
Sbjct: 207 TSAFGAGFCTTVIASPVDVVKTRYMNSAL--GQYHSAGHCALTMLRKEGPRAFYKGFMPS 264

Query: 65  TIRAFPVNYIMFVTYEEFK 83
            +R    N +MFVTYE+ K
Sbjct: 265 FLRLGSWNVVMFVTYEQLK 283

>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303

 Score = 73.9 bits (182), Expect = 1e-17
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSL--TDPKYKGMFDCFRKNYRQYGWTFFFRGIS 62
           LAG  +G ++ A+  P DVVK   Q+ +      +Y+   + ++   R+ G    ++G S
Sbjct: 109 LAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTS 168

Query: 63  ITTIRAFPVNYIMFVTYEEFK 83
               R   VN    VTY+  K
Sbjct: 169 PNVARNAIVNCAELVTYDLIK 189

>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303

 Score = 53.8 bits (130), Expect = 2e-10
 Identities = 16/87 (18%), Positives = 27/87 (31%), Gaps = 8/87 (9%)

Query: 5  LAGGLSGLISWALIMPFDVVKSTLQ--------SDSLTDPKYKGMFDCFRKNYRQYGWTF 56
          L  G +  I+  +  P D  K  LQ          +    +Y+G+        R  G   
Sbjct: 6  LGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRS 65

Query: 57 FFRGISITTIRAFPVNYIMFVTYEEFK 83
           + G+     R      +    Y+  K
Sbjct: 66 LYNGLVAGLQRQMSFASVRIGLYDSVK 92

>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297

 Score = 70.4 bits (173), Expect = 2e-16
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSL---TDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
           +       ++  +  PFD V+  +   S     D  Y G  DC+RK  +  G   FF+G 
Sbjct: 214 MIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGA 273

Query: 62  SITTIRAFPVNYIMFVTYEEFK 83
               +R       + V Y+E K
Sbjct: 274 WSNVLRGMGGA-FVLVLYDEIK 294

>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297

 Score = 67.7 bits (166), Expect = 2e-15
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 5  LAGGLSGLISWALIMPFDVVKSTLQ-----SDSLTDPKYKGMFDCFRKNYRQYGWTFFFR 59
          LAGG++  IS   + P + VK  LQ          + +YKG+ DC  +  ++ G+  F+R
Sbjct: 12 LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 71

Query: 60 GISITTIRAFPVNYIMFVTYEEFK 83
          G     IR FP   + F   +++K
Sbjct: 72 GNLANVIRYFPTQALNFAFKDKYK 95

>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297

 Score = 64.2 bits (157), Expect = 4e-14
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSD---SLTDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
            +GG +G  S   + P D  ++ L +D        ++ G+ +C  K ++  G    ++G 
Sbjct: 117 ASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGF 176

Query: 62  SITTIRAFPVNYIMFVTYEEFK 83
           +++           F  Y+  K
Sbjct: 177 NVSVQGIIIYRAAYFGVYDTAK 198

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	87
2lck_A	303	Mitochondrial uncoupling protein 2; membrane prote	99.92
1okc_A	297	ADP, ATP carrier protein heart isoform T1; mitocho	99.91
2lck_A	303	Mitochondrial uncoupling protein 2; membrane prote	99.9
1okc_A	297	ADP, ATP carrier protein heart isoform T1; mitocho	99.9

>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}

Probab=99.92  E-value=4.9e-25  Score=137.49  Aligned_cols=83  Identities=25%  Similarity=0.312  Sum_probs=77.7

Q ss_pred             hhhhhHHHHHHHHhhhhccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhCccccccchHHHHHHHHHHHHHHHHHHHH
Q psy1348           2 ACGLAGGLSGLISWALIMPFDVVKSTLQSDSLTDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVTYEE   81 (87)
Q Consensus         2 ~~~~~g~~a~~~~~~~~~P~d~ik~~~q~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~ye~   81 (87)
                      ..+++|++||++++++++|+|+||+|+|.+.  ...|.++++++++++++||++|||||+.|+++|.+|.++++|.+||.
T Consensus       204 ~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~--~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~  281 (303)
T 2lck_A          204 CHFTSAFGAGFCTTVIASPVDVVKTRYMNSA--LGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQ  281 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--SSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCHHHHHHHHHHhcc--ccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHH
Confidence            3588999999999999999999999999984  45689999999999999999999999999999999999999999999


Q ss_pred             HHhhc
Q psy1348          82 FKCHC   86 (87)
Q Consensus        82 ~~~~~   86 (87)
                      +|+.+
T Consensus       282 ~k~~l  286 (303)
T 2lck_A          282 LKRAL  286 (303)
T ss_dssp             HHSCC
T ss_pred             HHHHH
Confidence            99764

>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*

Probab=99.91  E-value=8.5e-24  Score=131.44  Aligned_cols=84  Identities=19%  Similarity=0.381  Sum_probs=77.3

Q ss_pred             hhhhHHHHHHHHhhhhccHHHHHHHHHhCCC---CCCCCCCHHHHHHHHHHhhCccccccchHHHHHHHHHHHHHHHHHH
Q psy1348           3 CGLAGGLSGLISWALIMPFDVVKSTLQSDSL---TDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVTY   79 (87)
Q Consensus         3 ~~~~g~~a~~~~~~~~~P~d~ik~~~q~~~~---~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y   79 (87)
                      .+++|++||+++.++++|+|+||+|+|++..   ....|.++.+++++++++||++|||||+.++++|.+|+++++|.+|
T Consensus       115 ~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~y  194 (297)
T 1okc_A          115 NLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVY  194 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999743   1346899999999999999999999999999999999999999999


Q ss_pred             HHHHhhc
Q psy1348          80 EEFKCHC   86 (87)
Q Consensus        80 e~~~~~~   86 (87)
                      |.+|+.+
T Consensus       195 e~~k~~~  201 (297)
T 1okc_A          195 DTAKGML  201 (297)
T ss_dssp             HHHHHSS
T ss_pred             HHHHHHh
Confidence            9999854

>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}

Probab=99.90  E-value=8.8e-24  Score=131.81  Aligned_cols=85  Identities=27%  Similarity=0.365  Sum_probs=78.4

Q ss_pred             hhhhhHHHHHHHHhhhhccHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHhhCccccccchHHHHHHHHHHHHHHHHHH
Q psy1348           2 ACGLAGGLSGLISWALIMPFDVVKSTLQSDSL--TDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVTY   79 (87)
Q Consensus         2 ~~~~~g~~a~~~~~~~~~P~d~ik~~~q~~~~--~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y   79 (87)
                      ..+++|++||+++.++++|+|++|+|+|.+..  ....|.++.+++++++++||++|||||+.++++|.+|+++++|.+|
T Consensus       106 ~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~y  185 (303)
T 2lck_A          106 SRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTY  185 (303)
T ss_dssp             HHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999853  2347899999999999999999999999999999999999999999


Q ss_pred             HHHHhhc
Q psy1348          80 EEFKCHC   86 (87)
Q Consensus        80 e~~~~~~   86 (87)
                      |.+|+.+
T Consensus       186 e~~k~~l  192 (303)
T 2lck_A          186 DLIKDTL  192 (303)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHH
Confidence            9999865

>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*

Probab=99.90  E-value=2.8e-23  Score=129.09  Aligned_cols=84  Identities=31%  Similarity=0.508  Sum_probs=77.1

Q ss_pred             hhhhhHHHHHHHHhhhhccHHHHHHHHHhCCC-----CCCCCCCHHHHHHHHHHhhCccccccchHHHHHHHHHHHHHHH
Q psy1348           2 ACGLAGGLSGLISWALIMPFDVVKSTLQSDSL-----TDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMF   76 (87)
Q Consensus         2 ~~~~~g~~a~~~~~~~~~P~d~ik~~~q~~~~-----~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~   76 (87)
                      ..+++|++||+++.++++|+|++|+|+|.+..     ....|+++.+++++++++||++|||||+.+++++.+|.++++|
T Consensus         9 ~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f   88 (297)
T 1okc_A            9 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNF   88 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999742     1236889999999999999999999999999999999999999


Q ss_pred             HHHHHHHhh
Q psy1348          77 VTYEEFKCH   85 (87)
Q Consensus        77 ~~ye~~~~~   85 (87)
                      .+||.+|+.
T Consensus        89 ~~ye~~k~~   97 (297)
T 1okc_A           89 AFKDKYKQI   97 (297)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	87
d1okca_	292	f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta	3e-09
d1okca_	292	f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta	1e-07

>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 49.3 bits (116), Expect = 3e-09
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 5   LAGGLSGLISWALIMPFDVVKSTLQSDSL---TDPKYKGMFDCFRKNYRQYGWTFFFRGI 61
           +       ++  +  PFD V+  +   S     D  Y G  DC+RK  +  G   FF+G 
Sbjct: 213 MIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGA 272

Query: 62  SITTIRAFPVNYIMFVTYEE 81
               +R       + V Y+E
Sbjct: 273 WSNVLRGMG-GAFVLVLYDE 291

>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 44.7 bits (104), Expect = 1e-07
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 5  LAGGLSGLISWALIMPFDVVKSTLQSDSLT-----DPKYKGMFDCFRKNYRQYGWTFFFR 59
          LAGG++  IS   + P + VK  LQ    +     + +YKG+ DC  +  ++ G+  F+R
Sbjct: 11 LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 70

Query: 60 GISITTIRAFPVNYIMFVTYEEFKCHCL 87
          G     IR FP   + F   +++K   L
Sbjct: 71 GNLANVIRYFPTQALNFAFKDKYKQIFL 98

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	87
d1okca_	292	ADP,ATP carrier protein {Cow (Bos taurus), heart i	99.88
d1okca_	292	ADP,ATP carrier protein {Cow (Bos taurus), heart i	99.87

>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=99.88  E-value=1.1e-22  Score=124.17  Aligned_cols=80  Identities=25%  Similarity=0.419  Sum_probs=71.0

Q ss_pred             hhhhhHHHHHHHHhhhhccHHHHHHHHHhCCC---CCCCCCCHHHHHHHHHHhhCccccccchHHHHHHHHHHHHHHHHH
Q psy1348           2 ACGLAGGLSGLISWALIMPFDVVKSTLQSDSL---TDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMFVT   78 (87)
Q Consensus         2 ~~~~~g~~a~~~~~~~~~P~d~ik~~~q~~~~---~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~   78 (87)
                      ..+++|.+++.+++++++|+|+||+|+|.+..   ....|.++++++++++++||++|||||+.|+++|.+| +++.|.+
T Consensus       210 ~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~  288 (292)
T d1okca_         210 VSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVL  288 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhH
Confidence            35789999999999999999999999999854   2246889999999999999999999999999999766 6788999


Q ss_pred             HHHH
Q psy1348          79 YEEF   82 (87)
Q Consensus        79 ye~~   82 (87)
                      ||.+
T Consensus       289 ye~l  292 (292)
T d1okca_         289 YDEI  292 (292)
T ss_dssp             HHTC
T ss_pred             hhcC
Confidence            9963

>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=99.87  E-value=2e-22  Score=123.02  Aligned_cols=85  Identities=31%  Similarity=0.498  Sum_probs=78.0

Q ss_pred             hhhhhHHHHHHHHhhhhccHHHHHHHHHhCCC-----CCCCCCCHHHHHHHHHHhhCccccccchHHHHHHHHHHHHHHH
Q psy1348           2 ACGLAGGLSGLISWALIMPFDVVKSTLQSDSL-----TDPKYKGMFDCFRKNYRQYGWTFFFRGISITTIRAFPVNYIMF   76 (87)
Q Consensus         2 ~~~~~g~~a~~~~~~~~~P~d~ik~~~q~~~~-----~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~   76 (87)
                      +.+++|++||+++.++++|+|+||+|+|++..     ....++++++++++++++||+++||+|+.+.+++..|...++|
T Consensus         8 ~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~   87 (292)
T d1okca_           8 KDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNF   87 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchhH
Confidence            57899999999999999999999999998753     2356889999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhc
Q psy1348          77 VTYEEFKCHC   86 (87)
Q Consensus        77 ~~ye~~~~~~   86 (87)
                      ..||.+++.+
T Consensus        88 ~~~~~~~~~~   97 (292)
T d1okca_          88 AFKDKYKQIF   97 (292)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998764