Psyllid ID: psy13668

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510---
Protein Sequence
MESTVINNVMLHRLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGEIQEWNEPLLMKEKKALTAGAQPNGASLKENGAGKKQDGGENNESY
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccHHHHHHcHHHHHHHHHHHHHccccccccccccHHHHHHHHHcccccccccccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEcccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccccHHEEEcccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHccHHEEEEEEEHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccccHHHHHccHHHHHHHHHHHcccHHHHHHHHHcHHHHHHHHcccccHccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHEEEHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHcccHcHHHHHHHHHHccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEHHHcccHccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHcHHHcccccccccccHHcccccccccccccccccc
Coil and Loop (DISEMBL)
MESTVINNVMLHRLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTfassdpsesthYVAYGTAVMHKSNRfifsfqnlpptpwgkiatsaPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVdlisgwpnrsVIVTYKMRtilsgprltspfdfsasvgpgLGILAASYSGCNRLAVTVSFTlgmgtmgaflpslkvnaldlspnyAGTLMALVGGIgalsgtvspylvgvltpnwlaKQICNSVTYKMRtilsgptltspfdfsasvgpgLGILAASYSGCNRLAVTVSFTlgmgtmgaflpslkvnaldlspnyAGTLMALVGGIgalsgtvspylvgvltpngtlLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFmgsgeiqewnepLLMKEKKALtagaqpngaslkengagkkqdggennesy
Flexible Loop (DISEMBL)
MESTVINNVMLHRLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSItsvdlisgwpNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGEIQEWNEPLLMKEKKALTAGAqpngaslkengagkkqdggennesy
Low Complexity Region (SEG)
MESTVINNVMLHRLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGEIQEWNEPLLMKEKKALTAGAQPNGASLKENGAGKKQDGGENNESY
Disordered region (IsUnstruct)
****VINNVMLHRLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGEIQEWNEPLL************************************
Disordered Region (DISOPRED)
******NNVMLHRLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT********************WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGEIQEWN****************************************
Disordered Region (DISEMBL)
MESTVINNVMLHRLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGEIQEWNEPLLMKEKKALTAGAQPNGASLKEN***************
Disordered Region (DISPRO)
MESTVINNVMLHRLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGEIQEWN****************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MESTVINNVMLHRLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGEIQEWNEPLLMKEKKALTAGAQPNGASLKENGAGKKQDGGENNESY
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	513	2.2.26 [Sep-21-2011]
O61369	483	Putative inorganic phosph	N/A	N/A	0.446	0.474	0.358	1e-32
Q9V7S5	529	Putative inorganic phosph	no	N/A	0.452	0.438	0.330	6e-32
Q8BN82	495	Sialin OS=Mus musculus GN	yes	N/A	0.458	0.474	0.3	8e-27
Q9NRA2	495	Sialin OS=Homo sapiens GN	yes	N/A	0.450	0.466	0.307	5e-26
Q9MZD1	495	Sialin OS=Ovis aries GN=S	N/A	N/A	0.450	0.466	0.311	2e-25
Q03567	493	Uncharacterized transport	yes	N/A	0.452	0.470	0.321	2e-25
Q6INC8	576	Vesicular glutamate trans	N/A	N/A	0.461	0.411	0.295	7e-23
Q5W8I7	587	Vesicular glutamate trans	no	N/A	0.442	0.386	0.267	8e-23
Q9P2U8	582	Vesicular glutamate trans	no	N/A	0.444	0.391	0.269	1e-22
Q9JI12	582	Vesicular glutamate trans	no	N/A	0.444	0.391	0.269	1e-22

>sp|O61369|PICO_DROAN Putative inorganic phosphate cotransporter OS=Drosophila ananassae GN=Picot PE=3 SV=1

 Score =  141 bits (356), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 133/254 (52%), Gaps = 25/254 (9%)

Query: 74  GAQIGNVVSMAVSGLLIRY--LGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY 131
           GAQ G ++SM +SGLL  Y   GGW S+FYVFG VG  W   ++ F   DPS  TH    
Sbjct: 160 GAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSIAFLIFVYEDPS--TH---- 213

Query: 132 GTAVMHKSNRFI------FSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLP 185
              +  +  ++I            PP P+  I  S P   ++ A +GH++G  T++T+LP
Sbjct: 214 -PKIDEREKKYINESLWGTDVIKSPPIPFKSIVKSLPFYAILFAHMGHNYGYETLMTELP 272

Query: 186 KYMKDVLHFSITSVDLISGWPNR-----SVIVTYKMRTILSGPR--LTSPFDFSASVG-- 236
            YMK VL FS+ S  L+S  P       S+ ++     ++S  R  LT+      S+G  
Sbjct: 273 TYMKQVLRFSLKSNGLLSSLPYLAMWLLSMFISVIADWMISSKRFSLTATRKIINSIGQY 332

Query: 237 -PGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIG 295
            PGL ++AASY+GC+R       T+G+G  G      K+N LDL+P +AG LM++     
Sbjct: 333 GPGLALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPRFAGFLMSITNCSA 392

Query: 296 ALSGTVSPYLVGVL 309
            L+G ++P   G L
Sbjct: 393 NLAGLLAPIAAGNL 406

May be an inorganic phosphate cotransporter.
Drosophila ananassae (taxid: 7217)

>sp|Q9V7S5|PICO_DROME Putative inorganic phosphate cotransporter OS=Drosophila melanogaster GN=Picot PE=1 SV=1

 Score =  139 bits (349), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 129/257 (50%), Gaps = 25/257 (9%)

Query: 74  GAQIGNVVSMAVSGLLIRY--LGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY 131
           GAQ G ++SM +SGLL  Y   GGW S+FYVFG VG  W   ++ F   DPS        
Sbjct: 206 GAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSIAFLIFVHEDPSSHP----- 260

Query: 132 GTAVMHKSNRFI------FSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLP 185
              +  +  ++I            PP P+  I  S P   ++ A +GH++G  T++T+LP
Sbjct: 261 --TIDEREKKYINDSLWGTDVVKSPPIPFKAIIKSLPFYAILFAHMGHNYGYETLMTELP 318

Query: 186 KYMKDVLHFSITSVDLISGWPNR-----SVIVTYKMRTILSGPRLTSP-----FDFSASV 235
            YMK VL FS+ S  L+S  P       S+ ++     ++S  R +        +     
Sbjct: 319 TYMKQVLRFSLKSNGLLSSLPYLAMWLFSMFISVVADWMISSKRFSHTATRKLINSIGQY 378

Query: 236 GPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIG 295
           GPG+ ++AASY+GC+R       T+G+G  G      K+N LDL+P +AG LM++     
Sbjct: 379 GPGVALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPRFAGFLMSITNCSA 438

Query: 296 ALSGTVSPYLVGVLTPN 312
            L+G ++P   G L  +
Sbjct: 439 NLAGLLAPIAAGHLISD 455

May be an inorganic phosphate cotransporter.

Drosophila melanogaster (taxid: 7227)

>sp|Q8BN82|S17A5_MOUSE Sialin OS=Mus musculus GN=Slc17a5 PE=2 SV=2

 Score =  122 bits (305), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 15/250 (6%)

Query: 74  GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT 133
           GAQ+G V+S+ +SG++  Y+  WT VFY+FG VG+ WF LWM   S  P        Y  
Sbjct: 205 GAQLGTVISLPLSGIICYYMN-WTYVFYLFGIVGIVWFILWMWIVSDTPETHKTISHYEK 263

Query: 134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH 193
             +  S +   S Q +   PWG I  S P+  +++A   +++  +T++T LP YMK++L 
Sbjct: 264 EYIVSSLKNQLSSQKV--VPWGSILKSLPLWAIVVAHFSYNWSFYTLLTLLPTYMKEILR 321

Query: 194 FSITSVDLISGWPNRSVIVT----------YKMRTILSGPRLTSPFDFSASVGPGLGILA 243
           F++     +S  P     +            +++   S   +   F     VGP + ++A
Sbjct: 322 FNVQENGFLSALPYFGCWLCMILCGQAADYLRVKWNFSTISVRRIFSLVGMVGPAVFLVA 381

Query: 244 ASYSGCNRLAVTVSFTLGMGTMGAFLPS-LKVNALDLSPNYAGTLMALVGGIGALSGTVS 302
           A + GC+  ++ V+F     T+G F  S   +N LD++P+YAG L+ +      + G   
Sbjct: 382 AGFIGCD-YSLAVAFLTISTTLGGFASSGFSINHLDIAPSYAGILLGITNTFATIPGMTG 440

Query: 303 PYLVGVLTPN 312
           P +   LTP+
Sbjct: 441 PIIAKSLTPD 450

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.

Mus musculus (taxid: 10090)

>sp|Q9NRA2|S17A5_HUMAN Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2

 Score =  119 bits (298), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 23/254 (9%)

Query: 74  GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT 133
           GAQ+G V+S+ +SG++  Y+  WT VFY FG +G+ WF LW+   S  P +      Y  
Sbjct: 205 GAQLGTVISLPLSGIICYYMN-WTYVFYFFGTIGIFWFLLWIWLVSDTPQKHKRISHYEK 263

Query: 134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH 193
             +  S R   S Q     PW  I  S P+  +++A   +++  +T++T LP YMK++L 
Sbjct: 264 EYILSSLRNQLSSQK--SVPWVPILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILR 321

Query: 194 FSITSVDLISGWPNRSVIVTYKMRTILSG---PRLTSPFDFSA-----------SVGPGL 239
           F++     +S  P     +   +  ILSG     L + ++FS             +GP +
Sbjct: 322 FNVQENGFLSSLP----YLGSWLCMILSGQAADNLRAKWNFSTLCVRRIFSLIGMIGPAV 377

Query: 240 GILAASYSGCNRLAVTVSFTLGMGTMGAFLPS-LKVNALDLSPNYAGTLMALVGGIGALS 298
            ++AA + GC+  ++ V+F     T+G F  S   +N LD++P+YAG L+ +      + 
Sbjct: 378 FLVAAGFIGCD-YSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIP 436

Query: 299 GTVSPYLVGVLTPN 312
           G V P +   LTP+
Sbjct: 437 GMVGPVIAKSLTPD 450

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.

Homo sapiens (taxid: 9606)

>sp|Q9MZD1|S17A5_SHEEP Sialin OS=Ovis aries GN=SLC17A5 PE=2 SV=1

 Score =  117 bits (294), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 126/254 (49%), Gaps = 23/254 (9%)

Query: 74  GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT 133
           GAQ+G VVS+ +SG++  Y+  WT VFY FG VG+ WF LW+   S  P        Y  
Sbjct: 205 GAQLGTVVSLPLSGVICYYMN-WTYVFYFFGIVGIIWFILWICLVSDTPETHKTITPYEK 263

Query: 134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH 193
             +  S +   S Q     PW  +  S P+  +++A   +++  +T++T LP YMK+VL 
Sbjct: 264 EYILSSLKNQLSSQK--SVPWIPMLKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEVLR 321

Query: 194 FSITSVDLISGWPNRSVIVTYKMRTILSG---PRLTSPFDFSA-----------SVGPGL 239
           F+I     +S  P     +      ILSG     L + ++FS             +GP +
Sbjct: 322 FNIQENGFLSAVPYLGCWLC----MILSGQAADNLRARWNFSTLWVRRVFSLIGMIGPAI 377

Query: 240 GILAASYSGCNRLAVTVSFTLGMGTMGAFLPS-LKVNALDLSPNYAGTLMALVGGIGALS 298
            ++AA + GC+  ++ V+F     T+G F  S   +N LD++P+YAG L+ +      + 
Sbjct: 378 FLVAAGFIGCD-YSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIP 436

Query: 299 GTVSPYLVGVLTPN 312
           G + P +   LTP 
Sbjct: 437 GMIGPIIARSLTPE 450

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes (Probable). Receptor for CM101, a polysaccharide produced by group B Streptococcus with antipathoangiogenic properties.

Ovis aries (taxid: 9940)

>sp|Q03567|YLD2_CAEEL Uncharacterized transporter C38C10.2 OS=Caenorhabditis elegans GN=C38C10.2 PE=1 SV=2

 Score =  117 bits (293), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 127/261 (48%), Gaps = 29/261 (11%)

Query: 74  GAQIGNVVSMAVSGLLIRY--LGGWTSVFYVFGAVGLAWFALWMTFASSD---------P 122
           GAQIGNV+ + +SG L  Y   GGW S+FY+ G  G+ W A+W  + SSD         P
Sbjct: 180 GAQIGNVIVLPLSGFLCEYGFDGGWPSIFYIIGVFGVLWTAVWW-YVSSDKPATHPRITP 238

Query: 123 SESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVT 182
            E  + V    A M K          +P TPW KI TS  V          D+G +T++ 
Sbjct: 239 EEKQYIVTAVEASMGKDT------GKVPSTPWIKILTSPAVWACWAGHFAGDWGAYTMLV 292

Query: 183 DLPKYMKDVLHFSITSVDLISGWPNRSVIV----------TYKMRTILSGPRLTSPFDFS 232
            LP ++KDVL  +++S+  ++  P  +  +          T + + ILS           
Sbjct: 293 SLPSFLKDVLGLNLSSLGAVASIPYIAYFLAINAGGVLADTLRSKGILSTLNTRRAAMLV 352

Query: 233 ASVGPGLGILAASYSGCNRLAVTVSF-TLGMGTMGAFLPSLKVNALDLSPNYAGTLMALV 291
           A +G G+ ++A+ Y GC +  + + F T GM   G       VN L+++P ++GT+M   
Sbjct: 353 ALIGQGIFLVASGYCGCGQDVLVIIFITCGMAISGLQYAGFVVNYLEIAPPFSGTVMGTG 412

Query: 292 GGIGALSGTVSPYLVGVLTPN 312
             I AL+G +SP +   LTPN
Sbjct: 413 NTISALAGIISPAVSSYLTPN 433

Caenorhabditis elegans (taxid: 6239)

>sp|Q6INC8|VGLU1_XENLA Vesicular glutamate transporter 1 OS=Xenopus laevis GN=slc17a7 PE=2 SV=1

 Score =  109 bits (272), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 17/254 (6%)

Query: 73  TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSE----STHY 128
            G+  G VV+M ++G+L++Y  GW+SVFYV+G+ G+ W+  W+  +   P++    S   
Sbjct: 212 CGSYAGAVVAMPLAGVLVQY-SGWSSVFYVYGSFGITWYMFWILVSYESPAQHPTISEEE 270

Query: 129 VAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYM 188
             Y    + +S  F+         PW K  TS PV  +I+A     +  + ++   P Y 
Sbjct: 271 RKYIEESIGESTGFMNPMAKFK-APWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYF 329

Query: 189 KDVLHFSITSVDLISGWPN--RSVIVTY--KMRTILSGPRLTSPFDFSASVGPG-LG--- 240
           ++V  F+I+ V L+S  P+   ++IV    ++   L   R+ S  +    +  G  G   
Sbjct: 330 EEVFGFAISKVGLLSALPHLVMTIIVPIGGQIADFLRTKRIMSTTNVRKMMNCGGFGMEA 389

Query: 241 --ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALS 298
             +L   YS    +A++    L +G  G  +    VN LD++P YA  LM +  G+G LS
Sbjct: 390 TLLLVVGYSHSRGVAISF-LVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLS 448

Query: 299 GTVSPYLVGVLTPN 312
           G V P +VG +T +
Sbjct: 449 GMVCPLIVGAMTKH 462

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells.

Xenopus laevis (taxid: 8355)

>sp|Q5W8I7|VGL2B_DANRE Vesicular glutamate transporter 2.2 OS=Danio rerio GN=slc17a6a PE=2 SV=1

 Score =  108 bits (271), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 35/262 (13%)

Query: 74  GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSE----STHYV 129
           G+  G VV+M ++G+L++Y  GW+SVFY++G+ G+ W+  W+  +   P++    +    
Sbjct: 222 GSYAGAVVAMPLAGILVQY-SGWSSVFYIYGSFGIVWYMFWILVSYESPADHPTITDEER 280

Query: 130 AYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMK 189
            Y    + +S + + + +    TPW K  TS PV  +I+A     +  + ++   P Y +
Sbjct: 281 TYIEESIGESAKLLGAMEKYK-TPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFE 339

Query: 190 DVLHFSITSVDLISGWPN-------------------RSVIVTYKMRTILSGPRLTSPFD 230
           +V  F I+ V ++S  P+                   ++++ T  +R I++       F 
Sbjct: 340 EVFGFEISKVGMVSALPHLVMTIIVPIGGQLADYLRSKNILTTTTVRKIMN----CGGFG 395

Query: 231 FSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMAL 290
             A++     +L   +S    +A++    L +G  G  +    VN LD++P YA  LM +
Sbjct: 396 MEATL-----LLVVGFSHSKGVAISF-LVLAVGFSGFAISGFNVNHLDIAPRYASILMGI 449

Query: 291 VGGIGALSGTVSPYLVGVLTPN 312
             G+G LSG V P +VG +T N
Sbjct: 450 SNGVGTLSGMVCPLIVGAMTKN 471

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells.

Danio rerio (taxid: 7955)

>sp|Q9P2U8|VGLU2_HUMAN Vesicular glutamate transporter 2 OS=Homo sapiens GN=SLC17A6 PE=1 SV=1

 Score =  108 bits (269), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 126/263 (47%), Gaps = 35/263 (13%)

Query: 73  TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSE----STHY 128
            G+  G V++M ++G+L++Y G W+SVFYV+G+ G+ W+  W+  +   P++    +   
Sbjct: 220 CGSYAGAVIAMPLAGILVQYTG-WSSVFYVYGSFGMVWYMFWLLVSYESPAKHPTITDEE 278

Query: 129 VAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYM 188
             Y    + +S   + + +    TPW K  TS PV  +I+A     +  + ++   P Y 
Sbjct: 279 RRYIEESIGESANLLGAMEKFK-TPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYF 337

Query: 189 KDVLHFSITSVDLISGWPN-------------------RSVIVTYKMRTILSGPRLTSPF 229
           ++V  F I+ V ++S  P+                   + ++ T  +R I++       F
Sbjct: 338 EEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMN----CGGF 393

Query: 230 DFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMA 289
              A++     +L   YS    +A++    L +G  G  +    VN LD++P YA  LM 
Sbjct: 394 GMEATL-----LLVVGYSHTRGVAISF-LVLAVGFSGFAISGFNVNHLDIAPRYASILMG 447

Query: 290 LVGGIGALSGTVSPYLVGVLTPN 312
           +  G+G LSG V P +VG +T N
Sbjct: 448 ISNGVGTLSGMVCPIIVGAMTKN 470

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate.

Homo sapiens (taxid: 9606)

>sp|Q9JI12|VGLU2_RAT Vesicular glutamate transporter 2 OS=Rattus norvegicus GN=Slc17a6 PE=1 SV=1

 Score =  108 bits (269), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 126/263 (47%), Gaps = 35/263 (13%)

Query: 73  TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSE----STHY 128
            G+  G V++M ++G+L++Y G W+SVFYV+G+ G+ W+  W+  +   P++    +   
Sbjct: 220 CGSYAGAVIAMPLAGILVQYTG-WSSVFYVYGSFGMVWYMFWLLVSYESPAKHPTITDEE 278

Query: 129 VAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYM 188
             Y    + +S   + + +    TPW K  TS PV  +I+A     +  + ++   P Y 
Sbjct: 279 RRYIEESIGESANLLGAMEKFK-TPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYF 337

Query: 189 KDVLHFSITSVDLISGWPN-------------------RSVIVTYKMRTILSGPRLTSPF 229
           ++V  F I+ V ++S  P+                   + ++ T  +R I++       F
Sbjct: 338 EEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMN----CGGF 393

Query: 230 DFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMA 289
              A++     +L   YS    +A++    L +G  G  +    VN LD++P YA  LM 
Sbjct: 394 GMEATL-----LLVVGYSHTRGVAISF-LVLAVGFSGFAISGFNVNHLDIAPRYASILMG 447

Query: 290 LVGGIGALSGTVSPYLVGVLTPN 312
           +  G+G LSG V P +VG +T N
Sbjct: 448 ISNGVGTLSGMVCPIIVGAMTKN 470

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also play a role in the endocrine glutamatergic system of other tissues such as pineal gland and pancreas. May also mediate the transport of inorganic phosphate.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	513
193643337	493	PREDICTED: putative inorganic phosphate	0.465	0.484	0.497	9e-58
328706522	494	PREDICTED: putative inorganic phosphate	0.465	0.483	0.497	1e-57
193690601	520	PREDICTED: sialin-like [Acyrthosiphon pi	0.465	0.459	0.452	8e-54
328725531	380	PREDICTED: sialin-like, partial [Acyrtho	0.463	0.626	0.466	1e-53
328709879	514	PREDICTED: sialin-like [Acyrthosiphon pi	0.463	0.463	0.470	1e-53
170045572	498	sodium-dependent phosphate transporter [	0.458	0.471	0.466	2e-51
328713756	297	PREDICTED: putative inorganic phosphate	0.440	0.760	0.476	2e-51
328713763	514	PREDICTED: sialin-like [Acyrthosiphon pi	0.465	0.464	0.444	6e-51
312379474	501	hypothetical protein AND_08672 [Anophele	0.460	0.471	0.440	7e-51
119112717	503	AGAP007732-PA [Anopheles gambiae str. PE	0.460	0.469	0.440	1e-50

>gi|193643337|ref|XP_001943339.1| PREDICTED: putative inorganic phosphate cotransporter-like isoform 1 [Acyrthosiphon pisum]

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 124/249 (49%), Positives = 157/249 (63%), Gaps = 10/249 (4%)

Query: 74  GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT 133
           GAQ+GNV SM + G L+RY   WTSVFY FG  G+ W   W     + P+          
Sbjct: 184 GAQVGNVASMQLGGFLMRYTNSWTSVFYAFGVFGIFWLMFWFVLIYNHPNRHPFISQREK 243

Query: 134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH 193
             ++++   +         PW  IATSAPV GLII QIGHD+GLFTI+TDLPKYMK VL 
Sbjct: 244 QYLNRAIDTVDPDDGKLSIPWKSIATSAPVWGLIIVQIGHDWGLFTIITDLPKYMKSVLK 303

Query: 194 FSITSVDLISGWPNRSVIVT-----YKMRTILSGPRLT-----SPFDFSASVGPGLGILA 243
           FS+    L+SG P   + +      + + ++LS    T       F   ASVGP LGI+A
Sbjct: 304 FSVVENGLLSGLPYIVMWLVAMGSGFIVDSMLSSQYFTVTCIRKTFVTIASVGPALGIVA 363

Query: 244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSP 303
           ASYSGC+++    SFT+GMG MG F+PSLKVNALDLSPNYAGTLMA+VG IG LSG ++P
Sbjct: 364 ASYSGCDKVLAVASFTIGMGLMGTFVPSLKVNALDLSPNYAGTLMAIVGTIGCLSGVIAP 423

Query: 304 YLVGVLTPN 312
           Y+VG++ PN
Sbjct: 424 YIVGIMVPN 432

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328706522|ref|XP_003243119.1| PREDICTED: putative inorganic phosphate cotransporter-like isoform 2 [Acyrthosiphon pisum]

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/249 (49%), Positives = 157/249 (63%), Gaps = 10/249 (4%)

Query: 74  GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT 133
           GAQ+GNV SM + G L+RY   WTSVFY FG  G+ W   W     + P+          
Sbjct: 185 GAQVGNVASMQLGGFLMRYTNSWTSVFYAFGVFGIFWLMFWFVLIYNHPNRHPFISQREK 244

Query: 134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH 193
             ++++   +         PW  IATSAPV GLII QIGHD+GLFTI+TDLPKYMK VL 
Sbjct: 245 QYLNRAIDTVDPDDGKLSIPWKSIATSAPVWGLIIVQIGHDWGLFTIITDLPKYMKSVLK 304

Query: 194 FSITSVDLISGWPNRSVIVT-----YKMRTILSGPRLT-----SPFDFSASVGPGLGILA 243
           FS+    L+SG P   + +      + + ++LS    T       F   ASVGP LGI+A
Sbjct: 305 FSVVENGLLSGLPYIVMWLVAMGSGFIVDSMLSSQYFTVTCIRKTFVTIASVGPALGIVA 364

Query: 244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSP 303
           ASYSGC+++    SFT+GMG MG F+PSLKVNALDLSPNYAGTLMA+VG IG LSG ++P
Sbjct: 365 ASYSGCDKVLAVASFTIGMGLMGTFVPSLKVNALDLSPNYAGTLMAIVGTIGCLSGVIAP 424

Query: 304 YLVGVLTPN 312
           Y+VG++ PN
Sbjct: 425 YIVGIMVPN 433

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193690601|ref|XP_001949739.1| PREDICTED: sialin-like [Acyrthosiphon pisum]

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 113/250 (45%), Positives = 158/250 (63%), Gaps = 11/250 (4%)

Query: 74  GAQIGNVVSMAVSGLLIRYL-GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG 132
           GAQIGN++S  +SG ++RY+ GGW +VFY FG V + WF +W  F  +DP+         
Sbjct: 201 GAQIGNILSNFLSGFIMRYIPGGWPNVFYFFGIVSIIWFLIWCMFVYNDPNSHPFISDEE 260

Query: 133 TAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL 192
            A + +S   +   ++L PTPW  I TS PV  LII   GHD+G FT+++DLPKYM DVL
Sbjct: 261 RAYLKRSIGRLERKKDLKPTPWKSILTSGPVWALIIGGAGHDWGAFTLISDLPKYMSDVL 320

Query: 193 HFSITSVDLISGWPNRSVIVTYKMRTILSGP----------RLTSPFDFSASVGPGLGIL 242
           HFS+T   L++  P  +  VT  + +IL+            R+   +    ++GP LG++
Sbjct: 321 HFSVTENGLLTSIPFLAQWVTSVVASILADRLISKGSMKVTRVRKIYAIIGNLGPALGVM 380

Query: 243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVS 302
            AS+ GCN++  T+ FTLG+  MG   PSL++N+LDLSPNY+ TLM LV GIG LSG  +
Sbjct: 381 CASFVGCNKIIATLCFTLGVALMGFCYPSLRINSLDLSPNYSPTLMGLVNGIGCLSGMAT 440

Query: 303 PYLVGVLTPN 312
           PY+VG+LTPN
Sbjct: 441 PYIVGILTPN 450

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328725531|ref|XP_001952551.2| PREDICTED: sialin-like, partial [Acyrthosiphon pisum]

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 117/251 (46%), Positives = 157/251 (62%), Gaps = 13/251 (5%)

Query: 74  GAQIGNVVSMAVSGLLIRYL-GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG 132
           G QIGN+ S  +SG +I+Y+ GGW +VFY FG   L WF LW  F  +DP+         
Sbjct: 56  GVQIGNIFSNFLSGFIIQYIPGGWPNVFYFFGITSLIWFVLWCIFVYNDPNSHPFISDME 115

Query: 133 TAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL 192
              + +S   +   ++L PTPW  I TS PV  LII + GHD+G FTI++DLPKYM DVL
Sbjct: 116 RDYLKQSIGSLERKKDLAPTPWKSILTSWPVWALIIVEAGHDWGGFTIISDLPKYMSDVL 175

Query: 193 HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSP-----------FDFSASVGPGLGI 241
           HFSIT   L+S  P  +  VT  + +IL+  RL S            +    +VGPG+G+
Sbjct: 176 HFSITENGLLSSIPYIAQWVTSILASILAD-RLISKRIMSVTAVRKVYAIIGTVGPGMGV 234

Query: 242 LAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTV 301
           + AS+ GC+++  T+ FTLGM  MG   PS+++N+LDLSPNYA T+MALV GIG LSG  
Sbjct: 235 MCASFVGCDKMIATLCFTLGMALMGFCYPSIRINSLDLSPNYAPTIMALVNGIGCLSGMA 294

Query: 302 SPYLVGVLTPN 312
           +PY+ G+LTPN
Sbjct: 295 TPYVAGILTPN 305

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328709879|ref|XP_001947589.2| PREDICTED: sialin-like [Acyrthosiphon pisum]

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/251 (47%), Positives = 157/251 (62%), Gaps = 13/251 (5%)

Query: 74  GAQIGNVVSMAVSGLLIRYL-GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG 132
           G QIGN+ S  +SG +I+Y+ GGW +VFY FG   L WF LW  F  +DP+         
Sbjct: 190 GVQIGNIFSNFLSGFIIQYIPGGWPNVFYFFGITSLIWFVLWCIFVYNDPNSHPFISDME 249

Query: 133 TAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL 192
              + +S   +   ++L PTPW  I TS PV  LII + GHD+G FTI++DLPKYM DVL
Sbjct: 250 RDYLKQSIGSLERKKDLAPTPWKSILTSWPVWALIIVEAGHDWGGFTIISDLPKYMSDVL 309

Query: 193 HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA-----------SVGPGLGI 241
           HFSIT   L+S  P  +  VT  + +IL+  RL S    S            +VGPG+G+
Sbjct: 310 HFSITENGLLSSIPYIAQWVTSILASILAD-RLISKRIMSVTAVRKVYAIIGTVGPGMGV 368

Query: 242 LAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTV 301
           + AS+ GC+++  T+ FTLGM  MG   PS+++N+LDLSPNYA T+MALV GIG LSG  
Sbjct: 369 MCASFVGCDKMIATLCFTLGMALMGFCYPSIRINSLDLSPNYAPTIMALVNGIGCLSGMA 428

Query: 302 SPYLVGVLTPN 312
           +PY+ G+LTPN
Sbjct: 429 TPYVAGILTPN 439

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170045572|ref|XP_001850378.1| sodium-dependent phosphate transporter [Culex quinquefasciatus] gi|167868556|gb|EDS31939.1| sodium-dependent phosphate transporter [Culex quinquefasciatus]

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/253 (46%), Positives = 150/253 (59%), Gaps = 18/253 (7%)

Query: 74  GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT 133
           G  +G +V   VSGLL+  + GW+SVFY FG +G+ WF L+     SDP           
Sbjct: 181 GGLVGTIVGNLVSGLLLHNIDGWSSVFYFFGGLGIFWFVLFTLLCYSDPESHPFISDKEK 240

Query: 134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH 193
           A + +    +   + LPPTPW  I TS P+IGL+ AQIGHD+G F +VTDLPKYM DVL 
Sbjct: 241 AYLKQEMGVLSRDKTLPPTPWRHILTSVPMIGLVCAQIGHDWGFFIMVTDLPKYMSDVLR 300

Query: 194 FSITSVDLISGWP--------------NRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL 239
           FSI    L S  P              +  +I T +M TI  G +L   F   AS GP  
Sbjct: 301 FSIKDNGLYSSLPYLLMWIVALSTGVLSDWLISTGRM-TITFGRKL---FTTIASAGPAF 356

Query: 240 GILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSG 299
            I+ ASY+GC+R  V   FTL MG MG F P +KVN LDLSPNYAG+LMA+  GIGA++G
Sbjct: 357 FIVGASYAGCDRALVVALFTLAMGFMGTFYPGMKVNPLDLSPNYAGSLMAVTNGIGAITG 416

Query: 300 TVSPYLVGVLTPN 312
            + PY+VG++TPN
Sbjct: 417 IIVPYVVGIMTPN 429

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713756|ref|XP_001947456.2| PREDICTED: putative inorganic phosphate cotransporter-like [Acyrthosiphon pisum]

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/250 (47%), Positives = 158/250 (63%), Gaps = 24/250 (9%)

Query: 69  MTFATGAQIGNVVSMAVSGLLIRYL-GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTH 127
           M FA G QIGN+ S  +SGL+I+Y+ GGW +VFY+FG   L WF LW  F   DPS    
Sbjct: 1   MVFA-GVQIGNIFSDFLSGLIIKYIPGGWPNVFYIFGITSLIWFVLWWMFVYDDPS---- 55

Query: 128 YVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKY 187
                      S+ FI   ++L PTPW  I TS  V  LII + GHD+G +TI+TDLPKY
Sbjct: 56  -----------SHPFIS--KDLAPTPWITILTSWAVWALIIVEAGHDWGAYTIITDLPKY 102

Query: 188 MKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPF-----DFSASVGPGLGIL 242
           M DVLHFS++   L+S +P  +  VT  + +IL+   LT            +VGPG+G++
Sbjct: 103 MNDVLHFSLSENGLLSSFPYIAKWVTSILVSILADWLLTKRLMSVTAVRKRNVGPGIGVM 162

Query: 243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVS 302
            AS+ GC+++  T+ FTLG+  MG   PS++VN+LDLSPNYA T+MALV GIG LSG  +
Sbjct: 163 CASFVGCDKIIATLCFTLGLALMGFCYPSIRVNSLDLSPNYAPTIMALVNGIGCLSGMAT 222

Query: 303 PYLVGVLTPN 312
           PY+ G+LT N
Sbjct: 223 PYIAGILTQN 232

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713763|ref|XP_001947560.2| PREDICTED: sialin-like [Acyrthosiphon pisum]

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 151/250 (60%), Gaps = 11/250 (4%)

Query: 74  GAQIGNVVSMAVSGLLIRYL-GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG 132
           G QIGN+ S  +SG +I+Y  GGW +VFY FG   L WF LW     +DP          
Sbjct: 190 GTQIGNIFSNFLSGFIIQYTPGGWPNVFYFFGITSLIWFVLWCVLVYNDPKSHPFISDTE 249

Query: 133 TAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL 192
              + KS   +   + LP TPW  I TS  +  LI  ++GHD+G FTI++DLPKYM DVL
Sbjct: 250 REYLKKSIGSLERKRELPSTPWKSILTSWKIWALIFIEVGHDWGAFTIISDLPKYMSDVL 309

Query: 193 HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSP----------FDFSASVGPGLGIL 242
           HFSI+   L+S  P  +  VT  + +IL+   ++            F    +VGPG+G++
Sbjct: 310 HFSISENGLLSSVPFIAQWVTSILASILADWLISKRIMTVTAVRKIFAIIGNVGPGIGVM 369

Query: 243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVS 302
            AS+ GC+++  T+ FTLGM  MG   PS++VN+LDLSPNY+ T+MALV GIG LSG  +
Sbjct: 370 CASFVGCDKMIATLCFTLGMALMGFCYPSIRVNSLDLSPNYSSTIMALVNGIGCLSGMAT 429

Query: 303 PYLVGVLTPN 312
           PY+ G+LTPN
Sbjct: 430 PYIAGILTPN 439

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312379474|gb|EFR25736.1| hypothetical protein AND_08672 [Anopheles darlingi]

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 111/252 (44%), Positives = 150/252 (59%), Gaps = 16/252 (6%)

Query: 74  GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT 133
           G Q+G ++   +SG+L+  + GW+SVFY FG +G+ WF ++     SDP           
Sbjct: 180 GGQVGTILGNLLSGVLLHNIDGWSSVFYFFGGLGILWFVIFTLLCYSDPESHPFISEKEK 239

Query: 134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH 193
           A + +    +   + LPPTPW  I TS P++ L+ AQIGHD+G F +VTDLPKYM DVL 
Sbjct: 240 AYLKQELGTLERDRTLPPTPWRYILTSVPMMALVCAQIGHDWGFFIMVTDLPKYMSDVLR 299

Query: 194 FSITSVDLISGWPNRSV-------------IVTYKMRTILSGPRLTSPFDFSASVGPGLG 240
           FSI    L S  P   +             ++T    TI  G +L   F   AS+GP   
Sbjct: 300 FSIKDNGLYSSLPYLVMWIVSLSTGVLSDWLITSGRMTITFGRKL---FTTIASIGPACF 356

Query: 241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGT 300
           I+ ASY+GC ++ V + FT  MG MG F P +KVN LDLSPNYAGTLMA+  GIGA++G 
Sbjct: 357 IVGASYAGCEKVIVVMLFTFAMGLMGTFYPGMKVNPLDLSPNYAGTLMAITNGIGAITGI 416

Query: 301 VSPYLVGVLTPN 312
           ++PY+VGV+TPN
Sbjct: 417 IAPYVVGVMTPN 428

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|119112717|ref|XP_317786.3| AGAP007732-PA [Anopheles gambiae str. PEST] gi|116123486|gb|EAA12474.3| AGAP007732-PA [Anopheles gambiae str. PEST]

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/252 (44%), Positives = 149/252 (59%), Gaps = 16/252 (6%)

Query: 74  GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT 133
           G Q+G ++   +SG+L+  + GW+SVFY FG +G+ WF ++     SDP           
Sbjct: 186 GGQVGTILGNLLSGVLLHNIEGWSSVFYFFGGLGVLWFVIFTLLCYSDPESHPFISEKEK 245

Query: 134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH 193
           A + +    +   + LPPTPW  I TS P++ L+ AQIGHD+G F +VTDLPKYM DVL 
Sbjct: 246 AYLKQELGTLERDRTLPPTPWRYILTSVPMMALVCAQIGHDWGFFIMVTDLPKYMSDVLR 305

Query: 194 FSITSVDLISGWPNRSV-------------IVTYKMRTILSGPRLTSPFDFSASVGPGLG 240
           FSI    L S  P   +             ++T    TI  G +L   F   AS+GP   
Sbjct: 306 FSIKDNGLYSSLPYLVMWIVSLSTGVLSDWLITSGRMTITFGRKL---FTTIASIGPACF 362

Query: 241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGT 300
           I+ ASY+GC +  V + FT  MG MG F P +KVN LDLSPNYAGTLMA+  GIGA++G 
Sbjct: 363 IVGASYAGCEKAVVVMLFTFAMGLMGTFYPGMKVNPLDLSPNYAGTLMAITNGIGAITGI 422

Query: 301 VSPYLVGVLTPN 312
           ++PY+VGV+TPN
Sbjct: 423 IAPYVVGVMTPN 434

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	513
FB|FBgn0010497	496	dmGlut "Dietary and metabolic	0.463	0.479	0.421	1.6e-51
FB|FBgn0028513	481	CG9254 [Drosophila melanogaste	0.460	0.490	0.409	4.7e-44
UNIPROTKB|O61369	483	Picot "Putative inorganic phos	0.454	0.482	0.364	5.1e-35
FB|FBgn0024315	529	Picot "Picot" [Drosophila mela	0.458	0.444	0.350	5.9e-33
ZFIN|ZDB-GENE-060929-1158	489	slc17a5 "solute carrier family	0.463	0.486	0.315	2.1e-29
MGI|MGI:1924105	495	Slc17a5 "solute carrier family	0.469	0.486	0.307	1.6e-28
RGD|1311388	495	Slc17a5 "solute carrier family	0.479	0.496	0.305	5.5e-28
UNIPROTKB|E1B7R3	495	SLC17A5 "Uncharacterized prote	0.467	0.484	0.304	5.5e-28
UNIPROTKB|E2R8R4	495	SLC17A5 "Uncharacterized prote	0.452	0.468	0.300	1.2e-27
WB|WBGene00008000	493	C38C10.2 [Caenorhabditis elega	0.528	0.549	0.316	1.3e-27

FB|FBgn0010497 dmGlut "Dietary and metabolic glutamate transporter" [Drosophila melanogaster (taxid:7227)]

 Score = 507 (183.5 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
 Identities = 105/249 (42%), Positives = 148/249 (59%)

Query:    74 GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT 133
             G Q+G ++   +SG+ I   G W  VFY FG +G+ WFA++M    SDP+          
Sbjct:   183 GGQVGTIMGNLLSGVFIDAYG-WEFVFYFFGGLGVVWFAIFMFLCYSDPTSHPFIKPSER 241

Query:   134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH 193
               + K    I   ++LPPTPW  I T+ P+  L+ AQIGHD+G + +VTDLPKYM DVL 
Sbjct:   242 EYLVKEIGTISRNEDLPPTPWKAILTNLPMFALVAAQIGHDWGFYIMVTDLPKYMADVLQ 301

Query:   194 FSITSVDLISGWP---------NRSVIVTYKMRT-ILSGPRLTSPFDFSASVGPGLGILA 243
             FSI +  L S  P             +  + +R  +LS           A+ GP + ++ 
Sbjct:   302 FSIKANGLYSSLPYVMMWIVSVGSGFVADWMIRRGVLSTTNTRKVMTGLAAFGPAIFMVG 361

Query:   244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSP 303
             ASY+GC+R+ V V FT+ MG MGA+   +K++ LD+SPNYAGTLMA+  GIGA++G ++P
Sbjct:   362 ASYAGCDRVLVVVLFTICMGLMGAYYAGMKLSPLDMSPNYAGTLMAITNGIGAITGVITP 421

Query:   304 YLVGVLTPN 312
             YLVGV+TPN
Sbjct:   422 YLVGVMTPN 430

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0007005 "mitochondrion organization" evidence=IGI;IMP

GO:0006541 "glutamine metabolic process" evidence=IGI;IMP

GO:0015319 "sodium:inorganic phosphate symporter activity" evidence=IDA

GO:0044341 "sodium-dependent phosphate transport" evidence=IMP;IDA

GO:0051938 "L-glutamate import" evidence=IDA

GO:0005314 "high-affinity glutamate transmembrane transporter activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0015321 "sodium-dependent phosphate transmembrane transporter activity" evidence=IMP

FB|FBgn0028513 CG9254 [Drosophila melanogaster (taxid:7227)]

 Score = 434 (157.8 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
 Identities = 102/249 (40%), Positives = 140/249 (56%)

Query:    74 GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT 133
             G Q+G++    +SG ++  +  W  VFYVF  + L WF ++     S P    +      
Sbjct:   188 GGQMGSIAGNIISGYVLSSMD-WPWVFYVFAIIALVWFVVFTLVCFSSPFTHPYIKPEER 246

Query:   134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH 193
             A +  +       +N P TP+  I TS P+  LI AQIGHD+G + +V+ LPKYM DVL 
Sbjct:   247 AFL--AQEVPPPDKNKPKTPFFAILTSIPMWALISAQIGHDWGFYIMVSYLPKYMSDVLR 304

Query:   194 FSITSVDLISGWPN-----RSVI---VTYKM--RTILSGPRLTSPFDFSASVGPGLGILA 243
             FSI S  L S  P       S++   V  +M  R  +S           A+ GP + ++A
Sbjct:   305 FSIKSNGLYSSLPYVTMWIMSLLSGCVADQMIKRNCMSTTNTRKIMTGVAAFGPAVFMVA 364

Query:   244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSP 303
             ASY+GCNR  V   FT+ MG MG +   +K+  LD+SPNYAGTLMA+  GIGA++G VSP
Sbjct:   365 ASYAGCNRGMVVALFTITMGLMGTYYAGMKLTPLDMSPNYAGTLMAITNGIGAITGVVSP 424

Query:   304 YLVGVLTPN 312
             YLVGV+TPN
Sbjct:   425 YLVGVMTPN 433

GO:0005436 "sodium:phosphate symporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|O61369 Picot "Putative inorganic phosphate cotransporter" [Drosophila ananassae (taxid:7217)]

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 91/250 (36%), Positives = 132/250 (52%)

Query:    74 GAQIGNVVSMAVSGLLIRYL--GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY 131
             GAQ G ++SM +SGLL  Y   GGW S+FYVFG VG  W   ++ F   DPS  TH    
Sbjct:   160 GAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSIAFLIFVYEDPS--TH-PKI 216

Query:   132 GTAVMHKSNRFIFSFQNL--PPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMK 189
                     N  ++    +  PP P+  I  S P   ++ A +GH++G  T++T+LP YMK
Sbjct:   217 DEREKKYINESLWGTDVIKSPPIPFKSIVKSLPFYAILFAHMGHNYGYETLMTELPTYMK 276

Query:   190 DVLHFSITSVDLISGWPNR-----SVIVTYKMRTILSGPR--LTSPFDFSASVG---PGL 239
              VL FS+ S  L+S  P       S+ ++     ++S  R  LT+      S+G   PGL
Sbjct:   277 QVLRFSLKSNGLLSSLPYLAMWLLSMFISVIADWMISSKRFSLTATRKIINSIGQYGPGL 336

Query:   240 GILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSG 299
              ++AASY+GC+R       T+G+G  G      K+N LDL+P +AG LM++      L+G
Sbjct:   337 ALIAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPRFAGFLMSITNCSANLAG 396

Query:   300 TVSPYLVGVL 309
              ++P   G L
Sbjct:   397 LLAPIAAGNL 406

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=NAS

GO:0006817 "phosphate ion transport" evidence=NAS

GO:0016021 "integral to membrane" evidence=NAS

FB|FBgn0024315 Picot "Picot" [Drosophila melanogaster (taxid:7227)]

 Score = 369 (135.0 bits), Expect = 5.9e-33, P = 5.9e-33
 Identities = 87/248 (35%), Positives = 129/248 (52%)

Query:    74 GAQIGNVVSMAVSGLLIRYL--GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY 131
             GAQ G ++SM +SGLL  Y   GGW S+FYVFG VG  W   ++ F   DPS        
Sbjct:   206 GAQFGTIISMPLSGLLAEYGFDGGWPSIFYVFGIVGTVWSIAFLIFVHEDPSSHPTIDER 265

Query:   132 GTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDV 191
                 ++ S  +       PP P+  I  S P   ++ A +GH++G  T++T+LP YMK V
Sbjct:   266 EKKYINDS-LWGTDVVKSPPIPFKAIIKSLPFYAILFAHMGHNYGYETLMTELPTYMKQV 324

Query:   192 LHFSITSVDLISGWPNR-----SVIVTYKMRTILSGPRL--TSPFDFSASVG---PGLGI 241
             L FS+ S  L+S  P       S+ ++     ++S  R   T+      S+G   PG+ +
Sbjct:   325 LRFSLKSNGLLSSLPYLAMWLFSMFISVVADWMISSKRFSHTATRKLINSIGQYGPGVAL 384

Query:   242 LAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTV 301
             +AASY+GC+R       T+G+G  G      K+N LDL+P +AG LM++      L+G +
Sbjct:   385 IAASYTGCDRALTLAILTIGVGLNGGIYSGFKINHLDLTPRFAGFLMSITNCSANLAGLL 444

Query:   302 SPYLVGVL 309
             +P   G L
Sbjct:   445 APIAAGHL 452

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=NAS

GO:0006817 "phosphate ion transport" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA;NAS

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=IEA

GO:0035435 "phosphate ion transmembrane transport" evidence=IEA

ZFIN|ZDB-GENE-060929-1158 slc17a5 "solute carrier family 17 (anion/sugar transporter), member 5" [Danio rerio (taxid:7955)]

 Score = 341 (125.1 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 81/257 (31%), Positives = 122/257 (47%)

Query:    73 TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYV-AY 131
             TGAQ+G VV++ +SG +  YL  WT VFY+FGAVGL WF LW+ F S+ PS       A 
Sbjct:   199 TGAQLGTVVALPLSGQICFYLD-WTYVFYIFGAVGLLWFFLWICFVSNSPSSHKRITEAE 257

Query:   132 GTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDV 191
              T +M      +   Q+    PW  I  S P+  +++A   +++  +T++T LP YM DV
Sbjct:   258 KTYIMSSLKNELSPTQDY--IPWTSIFKSMPLWAIVVAHFSYNWTFYTLLTLLPTYMNDV 315

Query:   192 LHFSITSVDLISGWP----------NRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI 241
             L FSI    ++S  P             +    + R +     +   F      GP + +
Sbjct:   316 LGFSIQQNGMLSALPYLGCWLLALLGGQLADLLRERFLFRTVIVRKAFTVVGMAGPAVFL 375

Query:   242 LAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTV 301
             +AA Y+GCN +      T+     G       +N LD++P+YAG L+ +      + G V
Sbjct:   376 VAAGYTGCNYILAVAFLTISSSLGGISASGFNINHLDIAPSYAGILLGITNSFATIPGMV 435

Query:   302 SPYLVGVLT-----PNW 313
              P +   LT     P W
Sbjct:   436 GPVIARSLTKSNTIPEW 452

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

MGI|MGI:1924105 Slc17a5 "solute carrier family 17 (anion/sugar transporter), member 5" [Mus musculus (taxid:10090)]

 Score = 335 (123.0 bits), Expect = 1.6e-28, P = 1.6e-28
 Identities = 79/257 (30%), Positives = 133/257 (51%)

Query:    67 LWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSEST 126
             L +++A GAQ+G V+S+ +SG++  Y+  WT VFY+FG VG+ WF LWM   S  P    
Sbjct:   199 LTISYA-GAQLGTVISLPLSGIICYYMN-WTYVFYLFGIVGIVWFILWMWIVSDTPETHK 256

Query:   127 HYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPK 186
                 Y    +  S +   S Q +   PWG I  S P+  +++A   +++  +T++T LP 
Sbjct:   257 TISHYEKEYIVSSLKNQLSSQKV--VPWGSILKSLPLWAIVVAHFSYNWSFYTLLTLLPT 314

Query:   187 YMKDVLHFSITSVDLISGWPNRS----VIVT-----Y-KMRTILSGPRLTSPFDFSASVG 236
             YMK++L F++     +S  P       +I+      Y +++   S   +   F     VG
Sbjct:   315 YMKEILRFNVQENGFLSALPYFGCWLCMILCGQAADYLRVKWNFSTISVRRIFSLVGMVG 374

Query:   237 PGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPS-LKVNALDLSPNYAGTLMALVGGIG 295
             P + ++AA + GC+  ++ V+F     T+G F  S   +N LD++P+YAG L+ +     
Sbjct:   375 PAVFLVAAGFIGCD-YSLAVAFLTISTTLGGFASSGFSINHLDIAPSYAGILLGITNTFA 433

Query:   296 ALSGTVSPYLVGVLTPN 312
              + G   P +   LTP+
Sbjct:   434 TIPGMTGPIIAKSLTPD 450

GO:0005764 "lysosome" evidence=ISO

GO:0005765 "lysosomal membrane" evidence=ISO

GO:0005886 "plasma membrane" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006865 "amino acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=ISO

GO:0015293 "symporter activity" evidence=IEA

GO:0015739 "sialic acid transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA

GO:0030054 "cell junction" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISO

RGD|1311388 Slc17a5 "solute carrier family 17 (anion/sugar transporter), member 5" [Rattus norvegicus (taxid:10116)]

 Score = 331 (121.6 bits), Expect = 5.5e-28, P = 5.5e-28
 Identities = 80/262 (30%), Positives = 135/262 (51%)

Query:    67 LWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSEST 126
             L +++A GAQ+G V+S+ +SG++  Y+  WT VFY+FG VG+ WF LWM   S  P    
Sbjct:   199 LTISYA-GAQLGTVISLPLSGIICYYMN-WTYVFYLFGLVGIVWFILWMWIVSDTPETHK 256

Query:   127 HYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPK 186
                 Y    +  S +   S Q +   PW  I  S P+  +++A   +++  +T++T LP 
Sbjct:   257 TISHYEKEYIVSSLKNQLSSQKV--VPWVSILKSLPLWAIVVAHFSYNWTFYTLLTLLPT 314

Query:   187 YMKDVLHFSITSVDLISGWPNRS----VIVT-----Y-KMRTILSGPRLTSPFDFSASVG 236
             YMK++L F++     +S  P       +IV      Y +++   S   +   F     VG
Sbjct:   315 YMKEILRFNVQENGFLSALPYFGCWLCMIVCGQAADYLRVKWNFSTISVRRIFSLIGMVG 374

Query:   237 PGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPS-LKVNALDLSPNYAGTLMALVGGIG 295
             P + ++AA + GC+  ++ V+F     T+G F  S   +N LD++P+YAG L+ +     
Sbjct:   375 PAVFLVAAGFIGCD-YSLAVAFLTISTTLGGFASSGFSINHLDIAPSYAGILLGITNTFA 433

Query:   296 ALSGTVSPYLVGVLTPNWLAKQ 317
              + G + P +   LTP+   K+
Sbjct:   434 TIPGMIGPIIAKSLTPDNTIKE 455

GO:0005764 "lysosome" evidence=IDA

GO:0005765 "lysosomal membrane" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=ISO;IDA

GO:0015739 "sialic acid transport" evidence=ISO;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA;ISO

UNIPROTKB|E1B7R3 SLC17A5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 318 (117.0 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
 Identities = 78/256 (30%), Positives = 129/256 (50%)

Query:    67 LWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSEST 126
             L +++A GAQ+G VVS+ +SG++  Y+  WT VFY FG VG+ WF LW+   S  P    
Sbjct:   199 LSISYA-GAQLGTVVSLPLSGVICYYMN-WTYVFYFFGLVGIIWFILWICLVSDTPETHK 256

Query:   127 HYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPK 186
                 Y    +  S +   S Q     PW  +  S P+  +++A   +++  +T++T LP 
Sbjct:   257 TITPYEKEYILSSLKNQLSSQK--SVPWIPMLKSLPLWAIVVAHFSYNWTFYTLLTLLPT 314

Query:   187 YMKDVLHFSITSVDLISGWPNRS----VIVT------YKMRTILSGPRLTSPFDFSASVG 236
             YMK+VL F+I     +S  P       +I++       + R   S   +   F     +G
Sbjct:   315 YMKEVLRFNIQENGFLSAVPYLGCWLCMILSGQAADNLRARWNFSTLWVRRVFSLIGMIG 374

Query:   237 PGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPS-LKVNALDLSPNYAGTLMALVGGIG 295
             P + ++AA + GC+  ++ V+F     T+G F  S   +N LD++P+YAG L+ +     
Sbjct:   375 PAIFLVAAGFIGCD-YSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFA 433

Query:   296 ALSGTVSPYLVGVLTP 311
              + G + P +   LTP
Sbjct:   434 TIPGMIGPIIARSLTP 449

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2R8R4 SLC17A5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 314 (115.6 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
 Identities = 80/266 (30%), Positives = 134/266 (50%)

Query:    67 LWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSEST 126
             L +++A GAQ+G V+S+ +SG++  Y+  WT VFY+FG VG+ WF LW+   S  P   T
Sbjct:   199 LSISYA-GAQLGTVISLPLSGIICFYMN-WTYVFYLFGIVGIIWFILWIFLVSETPE--T 254

Query:   127 HYVAYGTAVMHKSNRFIFS-----FQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIV 181
             H       +  +   +I S       +    PW  +  S P+  +++A   +++  +T++
Sbjct:   255 H-----KTISRQEKEYILSSLKNQLSSQKSVPWIPMLKSLPLWAIVVAHFSYNWTFYTLL 309

Query:   182 TDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP---RLTSPFDFSA----- 233
             T LP YMK++L F++    L+S  P     +      ILSG     L + ++FS      
Sbjct:   310 TLLPTYMKEILRFNVQENGLLSALPYFGCWLCM----ILSGQAADNLRAKWNFSTICVRR 365

Query:   234 ------SVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPS-LKVNALDLSPNYAGT 286
                    +GP + ++AA + GC+     V  T+   T+G F  S   +N LD++P+YAG 
Sbjct:   366 VFSLIGMIGPAVFLVAAGFIGCDYSLAVVFLTIST-TLGGFCSSGFSINHLDIAPSYAGI 424

Query:   287 LMALVGGIGALSGTVSPYLVGVLTPN 312
             L+ +      + G V P +   LTP+
Sbjct:   425 LLGITNTFATIPGMVGPVIAKSLTPD 450

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00008000 C38C10.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 328 (120.5 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 95/300 (31%), Positives = 146/300 (48%)

Query:    69 MTFATGAQIGNVVSMAVSGLLIRYL--GGWTSVFYVFGAVGLAWFALWMTFASSDPS--- 123
             +T+A GAQIGNV+ + +SG L  Y   GGW S+FY+ G  G+ W A+W   +S  P+   
Sbjct:   176 VTYA-GAQIGNVIVLPLSGFLCEYGFDGGWPSIFYIIGVFGVLWTAVWWYVSSDKPATHP 234

Query:   124 ----ESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFT 179
                 E   Y+   TAV     +       +P TPW KI TS  V          D+G +T
Sbjct:   235 RITPEEKQYIV--TAVEASMGK---DTGKVPSTPWIKILTSPAVWACWAGHFAGDWGAYT 289

Query:   180 IVTDLPKYMKDVLHFSITSVDLISGWP--------NRSVIV--TYKMRTILSGPRLTSPF 229
             ++  LP ++KDVL  +++S+  ++  P        N   ++  T + + ILS        
Sbjct:   290 MLVSLPSFLKDVLGLNLSSLGAVASIPYIAYFLAINAGGVLADTLRSKGILSTLNTRRAA 349

Query:   230 DFSASVGPGLGILAASYSGCNRLAVTVSF-TLGMGTMGAFLPSLKVNALDLSPNYAGTLM 288
                A +G G+ ++A+ Y GC +  + + F T GM   G       VN L+++P ++GT+M
Sbjct:   350 MLVALIGQGIFLVASGYCGCGQDVLVIIFITCGMAISGLQYAGFVVNYLEIAPPFSGTVM 409

Query:   289 ALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILS-GPTLTSPFDFSASVGP 347
                  I AL+G +SP +   LTPN   ++    V +    IL+ G  L S F  S  V P
Sbjct:   410 GTGNTISALAGIISPAVSSYLTPNGTQEE-WQMVLWLTAGILTIGALLFSIFA-SGEVQP 467

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	513
TIGR00894	465	TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph	1e-31
TIGR00894	465	TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph	6e-12
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	2e-05

>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter

 Score =  126 bits (319), Expect = 1e-31
 Identities = 66/248 (26%), Positives = 95/248 (38%), Gaps = 19/248 (7%)

Query: 74  GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPS----ESTHYV 129
           G Q+G  + + +SG L    GGW  +FYVFG VG AW  LW  F + DPS     S    
Sbjct: 175 GFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK 234

Query: 130 AYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMK 189
            Y  + +                P   I  S PV  +  A  GH +    + T LP ++ 
Sbjct: 235 KYINSSLQGQK-----GSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFIS 289

Query: 190 DVLHFSITSVDLISGWP----------NRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL 239
            VL  S     L+S  P             +    K    LS       F+    +GPG+
Sbjct: 290 WVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGI 349

Query: 240 GILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSG 299
              A  Y         +  TL        L  + +N+LDL+P + G +  + G  G + G
Sbjct: 350 FAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGG 409

Query: 300 TVSPYLVG 307
            ++  L G
Sbjct: 410 LIASTLAG 417

[Transport and binding proteins, Anions]. Length = 465

>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter

 Score = 67.5 bits (165), Expect = 6e-12
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 15/153 (9%)

Query: 323 TYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSL 382
             K    LS       F+    +GPG+   A  Y         +  TL        L  +
Sbjct: 323 FLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGV 382

Query: 383 KVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLE 442
            +N+LDL+P + G +  + G  G + G ++  L G +    +                  
Sbjct: 383 LINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDS--------KN-------V 427

Query: 443 WRVVFWTAFFVMLITNIIYCFMGSGEIQEWNEP 475
           W +VF    FV ++  I Y   GS E Q+W + 
Sbjct: 428 WLIVFLIMAFVNILCVIFYLIFGSAERQDWAKE 460

[Transport and binding proteins, Anions]. Length = 465

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 46.6 bits (111), Expect = 2e-05
 Identities = 50/236 (21%), Positives = 77/236 (32%), Gaps = 18/236 (7%)

Query: 71  FATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVA 130
            + G  +G  +   + GLL    G W + F +   + L    L        P ES     
Sbjct: 126 LSAGFGLGAALGPLLGGLLASLFG-WRAAFLILAILALLAAVLAALLLPRPPPESKRPKP 184

Query: 131 YGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKD 190
              A               P  P  K+    PV+ L++A +   F  F ++T LP Y  +
Sbjct: 185 AEEA-------------PAPLVPAWKLLLRDPVLWLLLALLLFGFAFFALLTYLPLYQ-E 230

Query: 191 VLHFSITSVDLISGWPNRSVIVTYKMRTILS---GPRLTSPFDFSASVGPGLGILAASYS 247
           VL  S     L+ G       +   +   LS   G R          +   LG+   S +
Sbjct: 231 VLGLSALLAGLLLGLAGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLALLSLT 290

Query: 248 GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSP 303
             +   +     LG G    F     + +        GT   L    G+L G + P
Sbjct: 291 ESSLWLLVALLLLGFGAGLVFPALNALVSDLAPKEERGTASGLYNTAGSLGGALGP 346

Length = 346

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	513
KOG2532|consensus	466		100.0
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.92
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.88
PLN00028	476	nitrate transmembrane transporter; Provisional	99.83
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.81
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.81
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.81
PRK11663	434	regulatory protein UhpC; Provisional	99.81
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.81
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.8
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.8
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.79
PRK03545	390	putative arabinose transporter; Provisional	99.79
TIGR00893	399	2A0114 d-galactonate transporter.	99.78
TIGR00900	365	2A0121 H+ Antiporter protein.	99.77
PRK09705	393	cynX putative cyanate transporter; Provisional	99.77
PRK10091	382	MFS transport protein AraJ; Provisional	99.76
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.76
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.76
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.75
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.74
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.74
PRK03699	394	putative transporter; Provisional	99.74
PRK10642	490	proline/glycine betaine transporter; Provisional	99.74
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.74
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.74
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.74
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.73
PRK15011	393	sugar efflux transporter B; Provisional	99.73
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.73
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.73
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.72
KOG2533|consensus	495		99.71
TIGR00891	405	2A0112 putative sialic acid transporter.	99.71
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.71
PRK12307	426	putative sialic acid transporter; Provisional	99.7
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.7
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.69
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.69
TIGR00895	398	2A0115 benzoate transport.	99.69
PRK03893	496	putative sialic acid transporter; Provisional	99.68
PRK11043	401	putative transporter; Provisional	99.68
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.68
PRK09952	438	shikimate transporter; Provisional	99.67
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.67
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.67
PRK10504	471	putative transporter; Provisional	99.67
PRK09528	420	lacY galactoside permease; Reviewed	99.66
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.66
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.65
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.64
PRK10133	438	L-fucose transporter; Provisional	99.64
PRK10489	417	enterobactin exporter EntS; Provisional	99.64
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.64
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.63
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.63
PRK09874	408	drug efflux system protein MdtG; Provisional	99.62
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.62
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.62
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.62
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.61
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.61
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.61
PRK11010	491	ampG muropeptide transporter; Validated	99.6
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.59
PRK03633	381	putative MFS family transporter protein; Provision	99.59
PRK15075	434	citrate-proton symporter; Provisional	99.58
TIGR00901	356	2A0125 AmpG-related permease.	99.58
TIGR00898	505	2A0119 cation transport protein.	99.58
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.58
PRK10054	395	putative transporter; Provisional	99.57
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.57
PRK05122	399	major facilitator superfamily transporter; Provisi	99.57
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.56
PRK05122	399	major facilitator superfamily transporter; Provisi	99.56
KOG2504|consensus	509		99.55
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.55
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.55
KOG2532|consensus	466		99.54
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.54
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.54
PRK12382	392	putative transporter; Provisional	99.54
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.52
PRK12382	392	putative transporter; Provisional	99.51
PRK10054	395	putative transporter; Provisional	99.5
PRK09528	420	lacY galactoside permease; Reviewed	99.46
PRK09874	408	drug efflux system protein MdtG; Provisional	99.46
PRK10489	417	enterobactin exporter EntS; Provisional	99.46
PRK11902	402	ampG muropeptide transporter; Reviewed	99.45
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.45
PRK03545	390	putative arabinose transporter; Provisional	99.45
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.43
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.42
KOG1330|consensus	493		99.41
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.41
PRK03633	381	putative MFS family transporter protein; Provision	99.41
TIGR00805	633	oat sodium-independent organic anion transporter.	99.4
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.38
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.36
PF13347	428	MFS_2: MFS/sugar transport protein	99.34
KOG0569|consensus	485		99.32
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.32
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.32
PRK09848	448	glucuronide transporter; Provisional	99.32
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.32
PRK10091	382	MFS transport protein AraJ; Provisional	99.32
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.3
PRK03699	394	putative transporter; Provisional	99.3
PRK09705	393	cynX putative cyanate transporter; Provisional	99.3
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.29
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.28
PRK11043	401	putative transporter; Provisional	99.27
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.26
TIGR00893	399	2A0114 d-galactonate transporter.	99.26
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.25
PRK15011	393	sugar efflux transporter B; Provisional	99.24
PRK10504	471	putative transporter; Provisional	99.24
PRK09669	444	putative symporter YagG; Provisional	99.23
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.2
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.2
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.19
PRK10429	473	melibiose:sodium symporter; Provisional	99.18
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.18
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.17
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.17
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.17
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.17
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.16
KOG3764|consensus	464		99.16
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.14
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.13
PRK12307	426	putative sialic acid transporter; Provisional	99.13
KOG0253|consensus	528		99.12
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.12
KOG4686|consensus	459		99.12
TIGR00900	365	2A0121 H+ Antiporter protein.	99.11
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.11
PRK11663	434	regulatory protein UhpC; Provisional	99.1
TIGR00891	405	2A0112 putative sialic acid transporter.	99.1
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.1
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.08
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.08
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.08
KOG2615|consensus	451		99.07
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.05
PRK11462	460	putative transporter; Provisional	99.04
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.04
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.03
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.02
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.01
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	98.99
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	98.99
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	98.98
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	98.98
COG2211	467	MelB Na+/melibiose symporter and related transport	98.96
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	98.96
PRK09584	500	tppB putative tripeptide transporter permease; Rev	98.95
KOG0255|consensus	521		98.95
PRK11010	491	ampG muropeptide transporter; Validated	98.95
TIGR00895	398	2A0115 benzoate transport.	98.93
TIGR00898	505	2A0119 cation transport protein.	98.93
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	98.93
PRK10133	438	L-fucose transporter; Provisional	98.93
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	98.93
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	98.92
PRK15403	413	multidrug efflux system protein MdtM; Provisional	98.9
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	98.9
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	98.9
KOG0254|consensus	513		98.89
PRK10642	490	proline/glycine betaine transporter; Provisional	98.89
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	98.87
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	98.87
PRK09952	438	shikimate transporter; Provisional	98.86
TIGR00788	468	fbt folate/biopterin transporter. The only functio	98.86
KOG0252|consensus	538		98.85
KOG3626|consensus	735		98.84
PRK10077	479	xylE D-xylose transporter XylE; Provisional	98.83
PRK10429	473	melibiose:sodium symporter; Provisional	98.82
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	98.81
PTZ00207	591	hypothetical protein; Provisional	98.8
PRK09584	500	tppB putative tripeptide transporter permease; Rev	98.8
PRK10207	489	dipeptide/tripeptide permease B; Provisional	98.78
PLN00028	476	nitrate transmembrane transporter; Provisional	98.77
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	98.77
PRK11902	402	ampG muropeptide transporter; Reviewed	98.75
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	98.74
PRK10406	432	alpha-ketoglutarate transporter; Provisional	98.73
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	98.7
KOG2563|consensus	480		98.62
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	98.62
PRK03893	496	putative sialic acid transporter; Provisional	98.62
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.59
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	98.59
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	98.57
PRK09848	448	glucuronide transporter; Provisional	98.57
PRK15075	434	citrate-proton symporter; Provisional	98.57
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	98.53
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	98.52
KOG3764|consensus	464		98.52
PRK09669	444	putative symporter YagG; Provisional	98.5
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	98.48
TIGR00892	455	2A0113 monocarboxylate transporter 1.	98.48
PTZ00207	591	hypothetical protein; Provisional	98.43
PF13347	428	MFS_2: MFS/sugar transport protein	98.42
KOG1330|consensus	493		98.41
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	98.4
TIGR00896	355	CynX cyanate transporter. This family of proteins	98.37
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	98.36
TIGR00805	633	oat sodium-independent organic anion transporter.	98.32
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	98.31
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	98.29
PRK15462	493	dipeptide/tripeptide permease D; Provisional	98.26
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	98.23
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	98.23
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	98.2
KOG2816|consensus	463		98.19
COG2211	467	MelB Na+/melibiose symporter and related transport	98.18
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	98.14
KOG2615|consensus	451		98.04
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	98.01
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	97.87
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	97.84
KOG0255|consensus	521		97.83
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	97.79
COG2270	438	Permeases of the major facilitator superfamily [Ge	97.77
TIGR00901	356	2A0125 AmpG-related permease.	97.77
TIGR00788	468	fbt folate/biopterin transporter. The only functio	97.77
PF12832	77	MFS_1_like: MFS_1 like family	97.67
KOG2504|consensus	509		97.65
PRK11462	460	putative transporter; Provisional	97.64
KOG0253|consensus	528		97.64
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	97.4
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	97.37
KOG2533|consensus	495		97.27
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	97.25
KOG3762|consensus	618		97.23
KOG0569|consensus	485		97.06
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	97.0
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	96.9
KOG0254|consensus	513		96.86
KOG2563|consensus	480		96.77
KOG2325|consensus	488		96.75
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	96.75
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	96.58
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	96.54
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	96.51
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	96.47
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	96.39
KOG2325|consensus	488		96.35
KOG3626|consensus	735		96.24
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	96.22
KOG0252|consensus	538		96.07
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	96.01
COG0477	338	ProP Permeases of the major facilitator superfamil	96.0
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	95.19
KOG2816|consensus	463		94.61
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	94.44
PRK03612	521	spermidine synthase; Provisional	94.0
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	93.47
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	93.15
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	92.74
KOG0637|consensus	498		92.0
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	89.25
KOG3762|consensus	618		88.96
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	86.8
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	85.56
KOG3810|consensus	433		85.31
KOG3098|consensus	461		84.69
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	81.92
KOG1479|consensus	406		81.54

>KOG2532|consensus

Probab=100.00  E-value=1.1e-32  Score=281.50  Aligned_cols=331  Identities=31%  Similarity=0.585  Sum_probs=285.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH---------------------------------
Q psy13668         20 SNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA---------------------------------   66 (513)
Q Consensus        20 ~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~---------------------------------   66 (513)
                      .-.+...++...|.++++..+|+++||+ |-|.+|...+.+.....+                                 
T Consensus        73 ~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~  151 (466)
T KOG2532|consen   73 TEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGS  151 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhc
Confidence            3356778889999999999999999999 888888765544432221                                 


Q ss_pred             -------------HHHHHHhhhhhHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccc
Q psy13668         67 -------------LWMTFATGAQIGNVVSMAVSGLLIRY-LGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG  132 (513)
Q Consensus        67 -------------~~~~~~~~~~~g~~~~~~~~~~l~~~-~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  132 (513)
                                   ...+...+..+|.++..++++.+.+. . ||+++||+.|.+++++.++|+++..|+|++|+..    
T Consensus       152 i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~-GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~i----  226 (466)
T KOG2532|consen  152 ILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSL-GWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNI----  226 (466)
T ss_pred             eeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCC-CCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCC----
Confidence                         11133334458889999999999988 6 9999999999999999999999999999999998    


Q ss_pred             ccccccchhhhhccCCC------CCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchh
Q psy13668        133 TAVMHKSNRFIFSFQNL------PPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWP  206 (513)
Q Consensus       133 ~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~  206 (513)
                         .++|++++++++..      .+.|++++++++++|..++..++.+++++.+.+|+|.|+++++|++..+.|++.+++
T Consensus       227 ---s~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP  303 (466)
T KOG2532|consen  227 ---SEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALP  303 (466)
T ss_pred             ---CHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHH
Confidence               88888887654321      367999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHH
Q psy13668        207 NRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGT  286 (513)
Q Consensus       207 ~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~  286 (513)
                      .+.+.+..+++|+++||..+| .+..                                                      
T Consensus       304 ~l~~~~~k~~~g~lsD~l~~~-~ls~------------------------------------------------------  328 (466)
T KOG2532|consen  304 FLAMAIVKFVAGQLSDRLTFR-ILSE------------------------------------------------------  328 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHhhc-cCch------------------------------------------------------
Confidence            999999999999999997766 2211                                                      


Q ss_pred             HHHHHHHHHhHHhhHHHHHHHHhccchhhhHHHhhhhhhhhhccCCCCCCCccchhhcccchhhhhhhhccCCc-hhHHH
Q psy13668        287 LMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCN-RLAVT  365 (513)
Q Consensus       287 ~~gi~~~~~~i~~~igp~l~g~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  365 (513)
                                                          +.+ ||         .+..++..+++++++.+.+.+++ ....+
T Consensus       329 ------------------------------------t~~-rk---------ifn~i~~~~~ai~l~~l~~~~~~~~~~a~  362 (466)
T KOG2532|consen  329 ------------------------------------TTV-RK---------IFNTIAFGGPAVFLLVLAFTSDEHRLLAV  362 (466)
T ss_pred             ------------------------------------HhH-HH---------HHHhHHHHHHHHHHHeeeecCCCcchHHH
Confidence                                                122 77         89999999999999999998754 45788


Q ss_pred             HHHHhhhcccccccccccccccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhH
Q psy13668        366 VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRV  445 (513)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (513)
                      .++.++.++.|+..++...+.+|.+|||++.++|+.|+..++.++++|.++|.+.++.+.+               +|+.
T Consensus       363 ~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~---------------eW~~  427 (466)
T KOG2532|consen  363 ILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTRE---------------EWRI  427 (466)
T ss_pred             HHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHH---------------HHHH
Confidence            8888889999999999999999999999999999999999999999999999999644445               8999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccccccccCCc
Q psy13668        446 VFWTAFFVMLITNIIYCFMGSGEIQEWNEP  475 (513)
Q Consensus       446 ~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~  475 (513)
                      +|++.+++++++.+++.++++.++++|.++
T Consensus       428 VF~i~a~i~~~~~i~f~~f~s~e~~~w~~~  457 (466)
T KOG2532|consen  428 VFLIAAGILIVGNIIFLFFGSGEPAPWTKS  457 (466)
T ss_pred             HHHHHHHHHHHhchheeEeecCcccCccCC
Confidence            999999999999999999999999999864

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.92  E-value=5.4e-24  Score=222.02  Aligned_cols=332  Identities=24%  Similarity=0.358  Sum_probs=227.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHH------H----HHHH-------------------
Q psy13668         19 QSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAW------F----ALWM-------------------   69 (513)
Q Consensus        19 ~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~------~----~~~~-------------------   69 (513)
                      ....|+..+.+.++.+++.+++|++.||+ |.|+++.....+..+.      .    ....                   
T Consensus        75 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~  153 (465)
T TIGR00894        75 GALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATH  153 (465)
T ss_pred             HHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHH
Confidence            44478889999999999999999999999 8887766422111110      0    0000                   


Q ss_pred             -----------------HHHhhhhhHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668         70 -----------------TFATGAQIGNVVSMAVSGLLIRY-LGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY  131 (513)
Q Consensus        70 -----------------~~~~~~~~g~~~~~~~~~~l~~~-~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  131 (513)
                                       +...+..+|..+++++.+.+.+. . |||+.|++.+++++++.++++.+.+|+|++++..   
T Consensus       154 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~-gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~---  229 (465)
T TIGR00894       154 KIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG-GWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCI---  229 (465)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCC---
Confidence                             11111236777888888888776 5 9999999999999888888887778887665543   


Q ss_pred             cccccccchhhhhcc------CCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhch
Q psy13668        132 GTAVMHKSNRFIFSF------QNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGW  205 (513)
Q Consensus       132 ~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~  205 (513)
                          +++|++...+.      ++..+.+++++++++.+|...+..++.....+.+.+|+|.|+++.+|++..+.++....
T Consensus       230 ----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~  305 (465)
T TIGR00894       230 ----SKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSL  305 (465)
T ss_pred             ----CHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHH
Confidence                33332222111      11123468889999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhH
Q psy13668        206 PNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAG  285 (513)
Q Consensus       206 ~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g  285 (513)
                      +.++..++.++.|+++||.++|+....-..                                                  
T Consensus       306 ~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~--------------------------------------------------  335 (465)
T TIGR00894       306 PYLFAWLCSIFAGYLADFLKSSKTLSLTAA--------------------------------------------------  335 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCcHHHH--------------------------------------------------
Confidence            999999999999999999765543211000                                                  


Q ss_pred             HHHHHHHHHHhHHhhHHHHHHHHhccchhhhHHHhhhhhhhhhccCCCCCCCccchhhcccchhhhhhhhccCCchhHHH
Q psy13668        286 TLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVT  365 (513)
Q Consensus       286 ~~~gi~~~~~~i~~~igp~l~g~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (513)
                                                               ++         .....+....+++.+.......+....+
T Consensus       336 -----------------------------------------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (465)
T TIGR00894       336 -----------------------------------------RK---------IFNGIGGLGPGIFAYALPYLSAAFYLTI  365 (465)
T ss_pred             -----------------------------------------HH---------HHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence                                                     00         0000000000000001111111222222


Q ss_pred             HHHHhhhcccccccccccccccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhH
Q psy13668        366 VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRV  445 (513)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (513)
                      ..+.++.+..+...+.......|..|+++|.++|+.|+.+.++++++|.+.|.+.+....+               +|+.
T Consensus       366 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~---------------~~~~  430 (465)
T TIGR00894       366 IILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKN---------------VWLI  430 (465)
T ss_pred             HHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCch---------------HHHH
Confidence            2333333333333444455566788899999999999999999999999999998764334               7999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccccccccCC
Q psy13668        446 VFWTAFFVMLITNIIYCFMGSGEIQEWNE  474 (513)
Q Consensus       446 ~f~~~a~~~~~~~~~~~~~~~~~~~~~~~  474 (513)
                      +|.+.+++.+++.+++.++.+.++++|++
T Consensus       431 ~f~~~~~~~~i~~i~~~~~~~~~~~~w~~  459 (465)
T TIGR00894       431 VFLIMAFVNILCVIFYLIFGSAERQDWAK  459 (465)
T ss_pred             HHHHHHHHHHHHHHHeeeeecceecCCCC
Confidence            99999999999998888777777777653

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.88  E-value=1.9e-21  Score=188.60  Aligned_cols=198  Identities=16%  Similarity=0.137  Sum_probs=150.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHH----HHHHHHHHH---------HHHH-------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYV----FGAVGLAWF---------ALWM-------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~----~g~~~~~~~---------~~~~-------------------   69 (513)
                      +|+..+.+.+...++..+.|.++||. +-|...-+    .+++.+.+.         ++|.                   
T Consensus        66 lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~  144 (448)
T COG2271          66 LGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITH  144 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence            68888999999999999999999999 75544332    122111111         0110                   


Q ss_pred             ------------HHHhhhhhHHHHHHHHH--HHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc--cchhcccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVS--GLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES--THYVAYGT  133 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~--~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~  133 (513)
                                  +++...++|..+.+++.  +.+..+. +||..|++.++++++++++.++..+|+|++.  |..+++++
T Consensus       145 Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~-~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~  223 (448)
T COG2271         145 WFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG-GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRG  223 (448)
T ss_pred             HcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhc
Confidence                        11112247788888887  8888887 9999999999999999999999999999874  55555554


Q ss_pred             cccccchhhhhccCCCC-----CCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH
Q psy13668        134 AVMHKSNRFIFSFQNLP-----PTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR  208 (513)
Q Consensus       134 ~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~  208 (513)
                      +..+.+   . +.++.+     ..-.+.+++||..|.++++.++.+..-|++..|.|.|+.|..|+|..++....+.+-.
T Consensus       224 d~~e~~---~-~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~  299 (448)
T COG2271         224 DPLEIY---E-EEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEV  299 (448)
T ss_pred             Cchhhh---h-hhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence            333221   1 111111     1123557899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhhcCCCc
Q psy13668        209 SVIVTYKMRTILSGPRL  225 (513)
Q Consensus       209 ~~~ig~~~~g~l~dr~~  225 (513)
                      ++++|.+++||+|||..
T Consensus       300 agl~G~Ll~GwlSDklf  316 (448)
T COG2271         300 AGLPGTLLAGWLSDKLF  316 (448)
T ss_pred             HhhHHHHHHHHHHHHhc
Confidence            99999999999999953

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.83  E-value=3.2e-19  Score=186.24  Aligned_cols=195  Identities=13%  Similarity=0.031  Sum_probs=125.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-----------HHHHHHhh----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-----------LWMTFATG----------------   74 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-----------~~~~~~~~----------------   74 (513)
                      .+...+...++..++.++.|+++||+ |.|.+..+...+..+...           ....+..+                
T Consensus        73 ~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~  151 (476)
T PLN00028         73 IGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTM  151 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence            45567778899999999999999999 877766542211111000           00000000                


Q ss_pred             ----------------hhhHHHHHHHHHHHH----Hhc----cCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhc
Q psy13668         75 ----------------AQIGNVVSMAVSGLL----IRY----LGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVA  130 (513)
Q Consensus        75 ----------------~~~g~~~~~~~~~~l----~~~----~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~  130 (513)
                                      ..+|..+++.+.+.+    ...    ..|||+.|++.+++++++.+.++++.++.|+++  .  
T Consensus       152 ~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~--~--  227 (476)
T PLN00028        152 FNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN--Y--  227 (476)
T ss_pred             cChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc--h--
Confidence                            012233333332222    111    128999999999988887777666655655432  1  


Q ss_pred             ccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHH
Q psy13668        131 YGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSV  210 (513)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~  210 (513)
                           ++.+++.. .+++.....+++.++++++|...+..+......+.+..|+|.|+.+.+|++..+++.+.+...+++
T Consensus       228 -----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~  301 (476)
T PLN00028        228 -----RELKKSGT-MPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMN  301 (476)
T ss_pred             -----hhHHhcCc-cccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence                 11000000 000000122356678889888888777776777788889999999889999999999999999999


Q ss_pred             HHHHHhhhhhcCCCccc
Q psy13668        211 IVTYKMRTILSGPRLTS  227 (513)
Q Consensus       211 ~ig~~~~g~l~dr~~~~  227 (513)
                      .+++++.|+++||++||
T Consensus       302 ~ig~~~~G~lsDr~~~r  318 (476)
T PLN00028        302 LFARPAGGYLSDVAARR  318 (476)
T ss_pred             HHHHhhhHHHHHHHHHh
Confidence            99999999999999876

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.81  E-value=1.1e-17  Score=171.45  Aligned_cols=281  Identities=12%  Similarity=0.090  Sum_probs=180.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH------HH-----HH-----------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA------WF-----AL-----------------------   67 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~------~~-----~~-----------------------   67 (513)
                      .+...+...++.+++.++.|++.||+ |.|.++.....+..+      +.     +.                       
T Consensus        45 ~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~  123 (412)
T TIGR02332        45 FGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTF  123 (412)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            67788889999999999999999999 888877642211110      00     00                       


Q ss_pred             ----------HHHHHhhhhhHHHHHHHHHHHHHh------ccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668         68 ----------WMTFATGAQIGNVVSMAVSGLLIR------YLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY  131 (513)
Q Consensus        68 ----------~~~~~~~~~~g~~~~~~~~~~l~~------~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  131 (513)
                                ..+.....++|..+++++++.+..      .. |||+.|++.++.+++..+++.+++||.|++.+..   
T Consensus       124 ~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l---  199 (412)
T TIGR02332       124 WFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALK-GWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWL---  199 (412)
T ss_pred             HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc-chhHHHHHHHHHHHHHHHHHhhccCCCcccCCCC---
Confidence                      001111123566777777777753      24 9999999988888877777777788888654322   


Q ss_pred             cccccccchhhh----h-c------cC---CCCC----CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-c
Q psy13668        132 GTAVMHKSNRFI----F-S------FQ---NLPP----TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDV-L  192 (513)
Q Consensus       132 ~~~~~~~~~~~~----~-~------~~---~~~~----~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~-~  192 (513)
                          ++++++..    + +      .+   +.++    ..+++++ ++.+|...+..++....++++.+|+|.++++. .
T Consensus       200 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~  274 (412)
T TIGR02332       200 ----DEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQ  274 (412)
T ss_pred             ----CHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence                11111000    0 0      00   0001    1233333 57888888888888888999999999999873 4


Q ss_pred             CcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccch-hhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhh
Q psy13668        193 HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPF-DFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPS  271 (513)
Q Consensus       193 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (513)
                      +++..+++.+.....++..+|++..|+++||+++|+. .....+...+++.+....+ +.......+...........+.
T Consensus       275 ~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~  353 (412)
T TIGR02332       275 GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATD-HNLIQLLGIIMASMGSFSAMAI  353 (412)
T ss_pred             CCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHhhhhhhH
Confidence            7788899999999999999999999999999987764 3333333333332222222 2222211111111111112223


Q ss_pred             HHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668        272 LKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       272 ~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      ......+.. ++++|++.|+.+..++++++++|.+.|.+.+..
T Consensus       354 ~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~  396 (412)
T TIGR02332       354 FWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDAT  396 (412)
T ss_pred             HHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccC
Confidence            344445544 578999999999999999999999999988753

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.81  E-value=1.8e-17  Score=163.19  Aligned_cols=269  Identities=17%  Similarity=0.159  Sum_probs=206.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHH------HHHHHH------------------HH----------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGA------VGLAWF------------------AL----------   67 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~------~~~~~~------------------~~----------   67 (513)
                      .|...+.+.++.+++.|+-..+.+|+ ++|.++...-.      +.+..+                  ..          
T Consensus        50 aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~  128 (394)
T COG2814          50 AGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAAR  128 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56778889999999999999999999 99888763211      111111                  11          


Q ss_pred             ----------HHHHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         68 ----------WMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        68 ----------~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                ......+..++.+++.+++.++.+.+ |||..|...+.++++..+..+..+|  |.+.+..       .+
T Consensus       129 lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~-GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~-------~~  198 (394)
T COG2814         129 LVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF-GWRATFLAIAVLALLALLLLWKLLP--PSEISGS-------LP  198 (394)
T ss_pred             HcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCC-------CC
Confidence                      11333344577888999999999998 9999999999999888777777777  2211111       10


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      .+           ..+..+.+|+|+.+...+..++...+.|...+|+.++++|..|+|....++....++++..+|+..+
T Consensus       199 ~~-----------~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~g  267 (394)
T COG2814         199 GP-----------LRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLG  267 (394)
T ss_pred             cc-----------hhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHH
Confidence            00           0011678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhH
Q psy13668        218 TILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGAL  297 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i  297 (513)
                      |++.|| +.|+.........++.++.+.+...+....+....+.................+..|+.++.+.+++....|+
T Consensus       268 Grl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nl  346 (394)
T COG2814         268 GRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNL  346 (394)
T ss_pred             hhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHH
Confidence            999999 8888877777777777777777777665555444442222333334455556666689999999999999999


Q ss_pred             HhhHHHHHHHHhccch
Q psy13668        298 SGTVSPYLVGVLTPNW  313 (513)
Q Consensus       298 ~~~igp~l~g~l~~~~  313 (513)
                      |-..|..+.|.++|++
T Consensus       347 gia~GA~lGG~v~~~~  362 (394)
T COG2814         347 GIALGAALGGLVLDAL  362 (394)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999999863

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.81  E-value=1.6e-18  Score=179.89  Aligned_cols=200  Identities=13%  Similarity=0.100  Sum_probs=123.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH------HHHH-HHHHH-----HHh----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG------LAWF-ALWMT-----FAT----------------   73 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~------~~~~-~~~~~-----~~~----------------   73 (513)
                      .+...+...++..++.++.|+++||+ |.|.++.....+.      +.+. ..+.+     +..                
T Consensus        56 ~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~  134 (455)
T TIGR00892        56 TAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLG  134 (455)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHH
Confidence            45556667777788888999999999 8887766321111      0000 00000     000                


Q ss_pred             ----------------hhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         74 ----------------GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        74 ----------------~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                      +..+|..+++++++.+.+.. |||+.|++.+++.++..+.+++..++.+.+++...+..+..++
T Consensus       135 ~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  213 (455)
T TIGR00892       135 KYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPP  213 (455)
T ss_pred             HHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCC
Confidence                            01255677788888888887 9999999988877765554444433222111000000000000


Q ss_pred             cchh-hhh-ccCCCCCCc--hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHH
Q psy13668        138 KSNR-FIF-SFQNLPPTP--WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVT  213 (513)
Q Consensus       138 ~~~~-~~~-~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig  213 (513)
                      +... ... +....+..+  ..+++++++++...+..++.....+....++|.|+++ +|++..+++.+.+...++.+++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~  292 (455)
T TIGR00892       214 DGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFA  292 (455)
T ss_pred             CCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHH
Confidence            0000 000 000000011  1257889999988888888888888888999999987 6999999999999999999999


Q ss_pred             HHhhhhhcCCC
Q psy13668        214 YKMRTILSGPR  224 (513)
Q Consensus       214 ~~~~g~l~dr~  224 (513)
                      ++..|+++||.
T Consensus       293 ~~~~g~l~d~~  303 (455)
T TIGR00892       293 RPSCGLIAGLK  303 (455)
T ss_pred             HHHHHHHhccc
Confidence            99999999984

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.81  E-value=1.9e-18  Score=178.51  Aligned_cols=199  Identities=13%  Similarity=0.003  Sum_probs=132.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-------HHH-------------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-------LWM-------------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-------~~~-------------------------   69 (513)
                      .+...+...++.+++.++.|++.||+ |.|.++.+...+..+...       .+.                         
T Consensus        60 ~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~  138 (434)
T PRK11663         60 IGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTA  138 (434)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence            57788889999999999999999999 877766532211110000       000                         


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  +......+|..+++++.+.+.+.. |||+.|++.++++++..++..++++|+|++.... +.++. .+
T Consensus       139 ~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~-~~~~~-~~  215 (434)
T PRK11663        139 WYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY-GWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLP-SVGEW-RH  215 (434)
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCC-Ccccc-cc
Confidence                        001111356777888888888887 9999999988877766655555667766432111 00000 00


Q ss_pred             cchhhhhccCCCCCCch-----hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHH
Q psy13668        138 KSNRFIFSFQNLPPTPW-----GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIV  212 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~i  212 (513)
                      ++.+...+. +.++.++     ...++++.+|...+..++.....+.+.+|+|.|+++.+|++..+++...+...+++.+
T Consensus       216 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~  294 (434)
T PRK11663        216 DALELAQQQ-EGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFI  294 (434)
T ss_pred             cccccchhc-cccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence            000000000 0001111     1256788899888888877778888889999999888899999999999999999999


Q ss_pred             HHHhhhhhcCCCc
Q psy13668        213 TYKMRTILSGPRL  225 (513)
Q Consensus       213 g~~~~g~l~dr~~  225 (513)
                      ++++.|+++||+.
T Consensus       295 g~~~~g~l~dr~~  307 (434)
T PRK11663        295 GALVAGWGSDKLF  307 (434)
T ss_pred             HHHHHhhhHHHhc
Confidence            9999999999983

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.81  E-value=1.6e-17  Score=173.34  Aligned_cols=281  Identities=14%  Similarity=0.051  Sum_probs=183.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHH----HHHHHHHHH------------HHHHHHHhh-----------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYV----FGAVGLAWF------------ALWMTFATG-----------   74 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~----~g~~~~~~~------------~~~~~~~~~-----------   74 (513)
                      .+...+.+.++..++.++.|+++||+ |.|+++.+    .+...+...            ++......+           
T Consensus        66 ~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~  144 (467)
T PRK09556         66 LGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSY  144 (467)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHH
Confidence            67888889999999999999999999 88886532    111111111            000000000           


Q ss_pred             ----------------------hhhHHHHHHHHHHHHHhcc--CCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhc
Q psy13668         75 ----------------------AQIGNVVSMAVSGLLIRYL--GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVA  130 (513)
Q Consensus        75 ----------------------~~~g~~~~~~~~~~l~~~~--~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~  130 (513)
                                            .++|.++++++...+....  .+||..|.+.++++++++++++++.+++|++++..  
T Consensus       145 ~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~--  222 (467)
T PRK09556        145 STITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWG--  222 (467)
T ss_pred             HHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCC--
Confidence                                  0256677776665554431  26999999888888888777777778877654332  


Q ss_pred             ccccccccch--h---hhhccCCCCCCc----h-hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhh
Q psy13668        131 YGTAVMHKSN--R---FIFSFQNLPPTP----W-GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVD  200 (513)
Q Consensus       131 ~~~~~~~~~~--~---~~~~~~~~~~~~----~-~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~  200 (513)
                           ++++.  +   ...+..+.++.+    + ++.++++.+|...+..++.....++..+|+|.|+++.+|+|..+++
T Consensus       223 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~  297 (467)
T PRK09556        223 -----KAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAI  297 (467)
T ss_pred             -----ChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHH
Confidence                 11110  0   000000001111    1 2368999999999999998888889999999999999999999999


Q ss_pred             HHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc-CChhHHH-HHHHHHHHHHHhhhhhhHHHhhcc
Q psy13668        201 LISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS-GCNRLAV-TVSFTLGMGTMGAFLPSLKVNALD  278 (513)
Q Consensus       201 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  278 (513)
                      .......++..++++..|+++||++||+..........++...+... ..+.... ...+.++....+.... ......|
T Consensus       298 ~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~  376 (467)
T PRK09556        298 NTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLL-IGVAAVG  376 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHH-HHHHHHh
Confidence            99999999999999999999999999887655443333332222222 2222222 2233333222222222 2234446


Q ss_pred             cCc-chhHHHHHHHHHHHhH-HhhHHHHHHHHhcc
Q psy13668        279 LSP-NYAGTLMALVGGIGAL-SGTVSPYLVGVLTP  311 (513)
Q Consensus       279 ~~p-~~~g~~~gi~~~~~~i-~~~igp~l~g~l~~  311 (513)
                      ..| +.+|++.|+.+..+++ +++++|.+.|.+.|
T Consensus       377 ~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~  411 (467)
T PRK09556        377 FVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD  411 (467)
T ss_pred             hcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence            665 5699999999999997 66999999999987

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.80  E-value=2.1e-17  Score=173.50  Aligned_cols=279  Identities=11%  Similarity=0.024  Sum_probs=185.6

Q ss_pred             hhhhhhh-h--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhh---------
Q psy13668          9 VMLHRLV-N--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQ---------   76 (513)
Q Consensus         9 ~~~~~~~-~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~---------   76 (513)
                      .++.+++ +  ||++..++......+|.+++|+++|++.|.. |||++|++..++.++...+......+.+         
T Consensus       117 ~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~-gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~  195 (495)
T PRK14995        117 AGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF-YWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNL  195 (495)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCh
Confidence            3455554 3  6788899999999999999999999999999 9999999988776665544444433321         


Q ss_pred             hHHHHH-----HHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCC
Q psy13668         77 IGNVVS-----MAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPP  151 (513)
Q Consensus        77 ~g~~~~-----~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (513)
                      .+....     ....+.......+|...... .........+..+...|...++|..       +               
T Consensus       196 ~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~f~~~e~~~~~p~~-------~---------------  252 (495)
T PRK14995        196 GHALMLIVAILLLVYSAKTALKGFLSLWVTS-LTLLTGALLLGLFIRTQLAASRPMI-------D---------------  252 (495)
T ss_pred             HhHHHHHHHHHHHHHHHHhccccCCchHHHH-HHHHHHHHHHHHHHHHHhcCCCCCc-------C---------------
Confidence            121111     01111111111123332211 1111111112222223322222222       1               


Q ss_pred             CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhh
Q psy13668        152 TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDF  231 (513)
Q Consensus       152 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~  231 (513)
                         .+++|++.+....+..++....+++...+.|.|+++.+|+|+.++++...+..++..++.++.|++.||+++|+...
T Consensus       253 ---~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~  329 (495)
T PRK14995        253 ---MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVAT  329 (495)
T ss_pred             ---HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH
Confidence               56888999888888888888888888999999999999999999999999999999999999999999999999888


Q ss_pred             HhhHHHHHHHHHHHhcC--ChhHHHH-HHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHH
Q psy13668        232 SASVGPGLGILAASYSG--CNRLAVT-VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGV  308 (513)
Q Consensus       232 ~~~~~~~~~~~~l~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~  308 (513)
                      .+.+..+++...+....  .+.+... ..+..+.+......+.........+++++|.+.++.++..++|+.+|+.+.|.
T Consensus       330 ~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~  409 (495)
T PRK14995        330 GGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGL  409 (495)
T ss_pred             HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            77777776665554332  2222222 23333333333333333444445556789999999999999999999999999


Q ss_pred             hccchh
Q psy13668        309 LTPNWL  314 (513)
Q Consensus       309 l~~~~~  314 (513)
                      +.++..
T Consensus       410 i~~~~~  415 (495)
T PRK14995        410 LLSRSY  415 (495)
T ss_pred             HHHHHH
Confidence            987554

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.80  E-value=3e-17  Score=165.27  Aligned_cols=266  Identities=10%  Similarity=-0.052  Sum_probs=177.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHH----H-------HH-----------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAW----F-------AL-----------------------   67 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~----~-------~~-----------------------   67 (513)
                      .+...+.+.+|.+++.+..|++.||+ |+|.+...........    .       +.                       
T Consensus        28 ~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~  106 (368)
T TIGR00903        28 LGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPFLLNAFAPAASQ  106 (368)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence            57778888999999999999999999 8777654211111000    0       00                       


Q ss_pred             ---------HHHHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccccc
Q psy13668         68 ---------WMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHK  138 (513)
Q Consensus        68 ---------~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  138 (513)
                               ..+...+.++|..+++++++.+.+.. |||+.|++.++++++..+++++++||+|+++++.       .+.
T Consensus       107 ~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~-------~~~  178 (368)
T TIGR00903       107 IREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIAAVAAAGIILVLAALPALPFQAAEG-------FGF  178 (368)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-------cch
Confidence                     00111122477788888888888887 9999999989988888777777888876543211       100


Q ss_pred             chhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhh
Q psy13668        139 SNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRT  218 (513)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g  218 (513)
                       ++.        ..+++++++++.+|...+..++....++++.+|+|.|+++ .|++.. .+.......+.+.++   .+
T Consensus       179 -~~~--------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~  244 (368)
T TIGR00903       179 -KDA--------VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VA  244 (368)
T ss_pred             -HHH--------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HH
Confidence             000        0134788999999999999999999999999999999976 578865 555555555555544   57


Q ss_pred             hhcCCCccc---chhh-HhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc-hhHHHHHHHHH
Q psy13668        219 ILSGPRLTS---PFDF-SASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN-YAGTLMALVGG  293 (513)
Q Consensus       219 ~l~dr~~~~---~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~gi~~~  293 (513)
                      +++||..||   +... ...+..++....+....+. .....++.+...+.....+.......|..|+ .||++.|+.+.
T Consensus       245 ~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~  323 (368)
T TIGR00903       245 VIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNR-LALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGF  323 (368)
T ss_pred             HhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcccc-HHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhH
Confidence            888886543   2222 2233333434343333322 2223333333344444555566777888875 69999999999


Q ss_pred             HHhHHhhHHHHHHHHhcc
Q psy13668        294 IGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       294 ~~~i~~~igp~l~g~l~~  311 (513)
                      .+++++.++|.+.+.+..
T Consensus       324 ~g~~~~~~~~~~~~~~~~  341 (368)
T TIGR00903       324 TSRAISVALALAAMLFIS  341 (368)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999987773

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.79  E-value=3.1e-18  Score=177.91  Aligned_cols=200  Identities=11%  Similarity=0.047  Sum_probs=127.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH----HHHH-----------HHHHHHHhh------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG----LAWF-----------ALWMTFATG------------   74 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~----~~~~-----------~~~~~~~~~------------   74 (513)
                      .++..+...++.+++.++.|.++||+ |.|.++.....+.    +...           .....+..+            
T Consensus        65 ~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~  143 (452)
T PRK11273         65 LGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGR  143 (452)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHH
Confidence            67788889999999999999999999 8887765322111    1110           000000000            


Q ss_pred             ---------------------hhhHHHH-HHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccc
Q psy13668         75 ---------------------AQIGNVV-SMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG  132 (513)
Q Consensus        75 ---------------------~~~g~~~-~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  132 (513)
                                           ..+|..+ ++.....+.... +||+.|++.++++++..++..++.+|+|++.+.. +..
T Consensus       144 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~  221 (452)
T PRK11273        144 TMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN-DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLP-PIE  221 (452)
T ss_pred             HHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCC-Chh
Confidence                                 0122222 222222222334 9999999988887777666666777776542211 000


Q ss_pred             ccccccchhhhhccCCCCCCch-----hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH
Q psy13668        133 TAVMHKSNRFIFSFQNLPPTPW-----GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN  207 (513)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~  207 (513)
                      +  .+++.+...+..+.++.+.     +.+++++.+|...+..++.+...+....|+|.|+++.+|++..+++.+.....
T Consensus       222 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~  299 (452)
T PRK11273        222 E--YKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYE  299 (452)
T ss_pred             h--hhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            0  0000000000000011111     23678899999999888888888899999999999989999999998888888


Q ss_pred             HHHHHHHHhhhhhcCCCcc
Q psy13668        208 RSVIVTYKMRTILSGPRLT  226 (513)
Q Consensus       208 ~~~~ig~~~~g~l~dr~~~  226 (513)
                      ++..+++++.|+++||+++
T Consensus       300 ~~~~~g~~~~G~l~dr~~~  318 (452)
T PRK11273        300 YAGIPGTLLCGWMSDKVFR  318 (452)
T ss_pred             HHHHHHHHHHHHHHHHHcc
Confidence            9999999999999999843

>PRK03545 putative arabinose transporter; Provisional

Probab=99.79  E-value=1.4e-16  Score=162.36  Aligned_cols=266  Identities=15%  Similarity=0.136  Sum_probs=179.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHH---H--------HHHH---------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAW---F--------ALWM---------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~---~--------~~~~---------------------   69 (513)
                      .+...+...++..++.+..|.+.||+ |.|.++.....+..+-   .        +...                     
T Consensus        46 ~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~  124 (390)
T PRK03545         46 VGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIR  124 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56777788889999999999999999 9888876432111110   0        0000                     


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  +...+..+|..+++++++.+.+.. |||+.|.+.++++++..+......|+.|++++          +
T Consensus       125 ~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~----------~  193 (390)
T PRK03545        125 VAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRTTFLAIGGGALITLLLLIKLLPLLPSEHS----------G  193 (390)
T ss_pred             hCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc----------c
Confidence                        001111356677888888888877 99999999888777665555444554332111          0


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      +.            .+.++.+|++.++......++.....+....++|.++++.+|+|..+.+.+.....++.+++++..
T Consensus       194 ~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~  261 (390)
T PRK03545        194 SL------------KSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLF  261 (390)
T ss_pred             hH------------HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence            00            112567888888877776666667777777889999998889999999999999999999999999


Q ss_pred             hhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHH-HHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHh
Q psy13668        218 TILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLA-VTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGA  296 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~  296 (513)
                      |+++||.++|+... +.....++...+.....+... ....+..+.+ .....+.......+..|++++.+.|+.+...+
T Consensus       262 g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  339 (390)
T PRK03545        262 SRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIA-IMCIGLAMQVKVLKLAPDATDVAMALFSGIFN  339 (390)
T ss_pred             HHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH-HhcchHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence            99999999876543 333333333333222222222 2222222332 22333344555667778899999999999999


Q ss_pred             HHhhHHHHHHHHhccch
Q psy13668        297 LSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       297 i~~~igp~l~g~l~~~~  313 (513)
                      +|..+||.+.|.+.|..
T Consensus       340 ~g~~~G~~~~G~~~~~~  356 (390)
T PRK03545        340 IGIGAGALLGNQVSLHL  356 (390)
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            99999999999988754

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.78  E-value=9.6e-17  Score=162.80  Aligned_cols=282  Identities=20%  Similarity=0.263  Sum_probs=187.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH----HH-------HHHH---------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA----WF-------ALWM---------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~----~~-------~~~~---------------------   69 (513)
                      .+...+...++..++.++.|.+.||+ |.|.++.....+..+    ..       +...                     
T Consensus        31 ~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~  109 (399)
T TIGR00893        31 YGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVAS  109 (399)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence            67788889999999999999999999 877766532211110    00       0000                     


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  +......+|..+++.+.+.+.+.. +||+.|.+.+++.++..+...++.+++|++.+..       ++
T Consensus       110 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~  181 (399)
T TIGR00893       110 WFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-SWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWL-------TE  181 (399)
T ss_pred             hCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHHHhhheecCCCCccccC-------CH
Confidence                        000111356778888888888877 9999999988887777666666666655432221       11


Q ss_pred             cchhh----------hhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH
Q psy13668        138 KSNRF----------IFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN  207 (513)
Q Consensus       138 ~~~~~----------~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~  207 (513)
                      ++++.          .++.++.++...++.+++++++...+..++.......+..+.|.|+++.+|.+..+.+.+.....
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (399)
T TIGR00893       182 EEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPG  261 (399)
T ss_pred             HHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHH
Confidence            11000          00011122334577889999999999999988999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhhcCCCcccch--hhHhhH--HHHH--HHHHHHhc-CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC
Q psy13668        208 RSVIVTYKMRTILSGPRLTSPF--DFSASV--GPGL--GILAASYS-GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS  280 (513)
Q Consensus       208 ~~~~ig~~~~g~l~dr~~~~~~--~~~~~~--~~~~--~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (513)
                      +...++++..|+++||.+||+.  ......  ...+  +....... ............++.+..+ ..+.......+..
T Consensus       262 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  340 (399)
T TIGR00893       262 IVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNA  340 (399)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhc
Confidence            9999999999999999998862  111111  1111  11111111 1122222222333333333 4556666666666


Q ss_pred             c-chhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668        281 P-NYAGTLMALVGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       281 p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      | ++||++.|+.+...++++.++|.+.|.+.+..
T Consensus       341 ~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~  374 (399)
T TIGR00893       341 PGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT  374 (399)
T ss_pred             ChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence            5 67999999999999999999999999998753

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.77  E-value=1.6e-16  Score=159.61  Aligned_cols=278  Identities=12%  Similarity=0.015  Sum_probs=185.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH----HHHHH--------HH-------------------
Q psy13668         21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL----AWFAL--------WM-------------------   69 (513)
Q Consensus        21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~----~~~~~--------~~-------------------   69 (513)
                      ..++..+...++.+++.++.|+++||+ |.|.++.....+..    .....        +.                   
T Consensus        35 ~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~  113 (365)
T TIGR00900        35 VLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAY  113 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            367888889999999999999999999 88888764322111    00000        00                   


Q ss_pred             ------------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668         70 ------------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY  131 (513)
Q Consensus        70 ------------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  131 (513)
                                        .......+|..+++.+++.+.+.. |||+.|++.++..++..+......++++++ +..   
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---  188 (365)
T TIGR00900       114 QAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-GIKWAIWVDAVGFAISALLIVSVRIPELAA-SEI---  188 (365)
T ss_pred             HHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHhcccccCCC-ccc---
Confidence                              000011356778888888888877 999999887665554433333222211111 010   


Q ss_pred             cccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHH-hhHHHHHHHhcCcchhhhhHHhchhHHHH
Q psy13668        132 GTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIV-TDLPKYMKDVLHFSITSVDLISGWPNRSV  210 (513)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~-~~lp~~l~~~~g~s~~~~~~~~~~~~~~~  210 (513)
                          ++.+++..++    ....++.+++++.++...+..++......... .+.|.|.++.+|.+..+.+.+.....++.
T Consensus       189 ----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (365)
T TIGR00900       189 ----QALSNAVLRD----TREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGA  260 (365)
T ss_pred             ----cccchhHHHH----HHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence                0000000000    01234567888888888877777777777666 78999999888999999999999999999


Q ss_pred             HHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHH
Q psy13668        211 IVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMA  289 (513)
Q Consensus       211 ~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~g  289 (513)
                      .++++..+++.||.+||+....+....+++...+.+.+++.+.......+...+.+...+.......+.. +++||++.|
T Consensus       261 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  340 (365)
T TIGR00900       261 LLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFG  340 (365)
T ss_pred             HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            9999999999999999988887776666666666555432222222222222223344455555666665 567999999


Q ss_pred             HHHHHHhHHhhHHHHHHHHhccc
Q psy13668        290 LVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       290 i~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      +.+...++++.++|.+.|.+.|.
T Consensus       341 ~~~~~~~~~~~~g~~~~g~l~~~  363 (365)
T TIGR00900       341 AQFSLSHAAWPLGLILAGPLADH  363 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999988764

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.77  E-value=5.6e-16  Score=157.98  Aligned_cols=265  Identities=12%  Similarity=0.076  Sum_probs=176.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH------HH-----HHHH---------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA------WF-----ALWM---------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~------~~-----~~~~---------------------   69 (513)
                      .+...+...++..++.++.|++.||+ |.|.++.....+..+      +.     .+..                     
T Consensus        46 ~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~  124 (393)
T PRK09705         46 AALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKR  124 (393)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHH
Confidence            67788888999999999999999999 888887742221111      00     0000                     


Q ss_pred             -----------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccccc
Q psy13668         70 -----------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHK  138 (513)
Q Consensus        70 -----------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  138 (513)
                                 ....+...|..+++.+++.+.++..+||+.+.+.++..++....+.+..+++|++++         +  
T Consensus       125 ~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--  193 (393)
T PRK09705        125 RFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSH---------K--  193 (393)
T ss_pred             HccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc---------C--
Confidence                       111111245666777777766654489998877666554443333333233222110         0  


Q ss_pred             chhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhh
Q psy13668        139 SNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRT  218 (513)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g  218 (513)
                      ++           ...++.+++++.|...+..++....+++..+|+|.|+++ +|++..+++.......+++++|++..+
T Consensus       194 ~~-----------~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g  261 (393)
T PRK09705        194 TT-----------TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMP  261 (393)
T ss_pred             CC-----------cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHH
Confidence            00           011345677888888777777778888999999999987 799999999999999999999999999


Q ss_pred             hhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHh-hcccCc-chhHHHHHHHHHHHh
Q psy13668        219 ILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVN-ALDLSP-NYAGTLMALVGGIGA  296 (513)
Q Consensus       219 ~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p-~~~g~~~gi~~~~~~  296 (513)
                      ++.||.+||+....+..+..++...+...+.+.... ..+..+.+.. ...+..... ..+..| +++|+..|+.+..++
T Consensus       262 ~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~  339 (393)
T PRK09705        262 AMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL-WAMVCGLGLG-GAFPLCLLLALDHSVQPAIAGKLVAFMQGIGF  339 (393)
T ss_pred             HHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH-HHHHHHHhcc-chHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence            999999999888877766666655544333322222 2222223322 223333333 333433 569999999999999


Q ss_pred             HHhhHHHHHHHHhccc
Q psy13668        297 LSGTVSPYLVGVLTPN  312 (513)
Q Consensus       297 i~~~igp~l~g~l~~~  312 (513)
                      +++.++|.+.|.+.|.
T Consensus       340 ~~~~~gp~~~G~l~~~  355 (393)
T PRK09705        340 IIAGLAPWFSGVLRSI  355 (393)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999988874

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.76  E-value=5.1e-16  Score=157.71  Aligned_cols=266  Identities=15%  Similarity=0.114  Sum_probs=173.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-----------HHH---------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-----------LWM---------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-----------~~~---------------------   69 (513)
                      .+...+...+|.+++.++.|+++||+ |.|.++.+...+..+-..           ...                     
T Consensus        40 ~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~  118 (382)
T PRK10091         40 AGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSK  118 (382)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            56778889999999999999999999 888887643221111000           000                     


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  ....+..+|..+++++++.+.+.. +||+.|.+.+++.++..+...+..||.+++.          ++
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~----------~~  187 (382)
T PRK10091        119 IIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF-SWRYTFLLIAVFNIAVLASIYFWVPDIRDEA----------KG  187 (382)
T ss_pred             hCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc-cHHHHHHHHHHHHHHHHHHHHHhCCCCCccc----------cc
Confidence                        000111244566677777777777 9999999988877666555455555543211          10


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      +.++            ..+.+++++.|......++.....+....+++.++++.+|++..+.+++.....++..+++++.
T Consensus       188 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  255 (382)
T PRK10091        188 GLRE------------QFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLS  255 (382)
T ss_pred             CHHH------------HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHH
Confidence            0000            1345677777777666666666666677788889988889999999999999999999999999


Q ss_pred             hhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHH-HHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHH
Q psy13668        218 TILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAV-TVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIG  295 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~  295 (513)
                      |++.||+++|+....+..+.+++.+.+....+..... ...+..+.+..+...+.......+..+ +..+.+  ..+...
T Consensus       256 g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  333 (382)
T PRK10091        256 GRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAF  333 (382)
T ss_pred             heeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHH
Confidence            9999999999988877777666665544333332222 222222232233333222223333333 345544  346778


Q ss_pred             hHHhhHHHHHHHHhccch
Q psy13668        296 ALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       296 ~i~~~igp~l~g~l~~~~  313 (513)
                      ++|.++||.+.|.+.|.+
T Consensus       334 ~~g~~~Gp~~~G~l~~~~  351 (382)
T PRK10091        334 NLGSAIGAYCGGMMLTLG  351 (382)
T ss_pred             HHHHHHHHHHhHHHHHcc
Confidence            999999999999998753

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.76  E-value=2.3e-16  Score=165.47  Aligned_cols=283  Identities=13%  Similarity=0.099  Sum_probs=185.7

Q ss_pred             echhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhh-------
Q psy13668          6 INNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQ-------   76 (513)
Q Consensus         6 ~~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~-------   76 (513)
                      ..+.++.+++|  +|++..++...+..+|..+++.++|++.|+. |||++|++.+++++.......+.....+       
T Consensus       110 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (485)
T TIGR00711       110 LSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWRWIFLINVPIGIIVVVVAFFILPRDKPAASENF  188 (485)
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-CceehhhhhhHHHHHHHHHHHHHcCCccccccCCC
Confidence            34567788884  6778899999999999999999999999999 9999999887766655544433332211       


Q ss_pred             --hHHHHHH-----HHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCC
Q psy13668         77 --IGNVVSM-----AVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNL  149 (513)
Q Consensus        77 --~g~~~~~-----~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (513)
                        .+..+..     ...........+|...-.+.............+..++..+++|..                     
T Consensus       189 d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------  247 (485)
T TIGR00711       189 DFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLV---------------------  247 (485)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCcc---------------------
Confidence              1111100     000000111114432211111111111101111111111111111                     


Q ss_pred             CCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccch
Q psy13668        150 PPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPF  229 (513)
Q Consensus       150 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~  229 (513)
                          ..+++++++++...+..++.....+....++|.|+++.+|+++.+++....+..++..+++++.|++.||.+||+.
T Consensus       248 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~  323 (485)
T TIGR00711       248 ----DLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL  323 (485)
T ss_pred             ----CHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH
Confidence                1467888999888888888888889999999999999999999999999999999999999999999999999998


Q ss_pred             hhHhhHHHHHHHHHHHh-c-CC-hhHH-HHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668        230 DFSASVGPGLGILAASY-S-GC-NRLA-VTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYL  305 (513)
Q Consensus       230 ~~~~~~~~~~~~~~l~~-~-~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l  305 (513)
                      ...+..+.+++...+.. . +. +... ....+..+.+......+.......+.+++++|.+.|+.++.+++|+.+|+.+
T Consensus       324 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i  403 (485)
T TIGR00711       324 VTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTAL  403 (485)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            88888777777766652 2 22 2222 2222233333322333333444455556889999999999999999999999


Q ss_pred             HHHhccchh
Q psy13668        306 VGVLTPNWL  314 (513)
Q Consensus       306 ~g~l~~~~~  314 (513)
                      .|.+.++..
T Consensus       404 ~g~~~~~~~  412 (485)
T TIGR00711       404 ITTILTNRT  412 (485)
T ss_pred             HHHHHHHHH
Confidence            999987543

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.76  E-value=5.1e-16  Score=157.00  Aligned_cols=268  Identities=14%  Similarity=0.052  Sum_probs=177.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHH----HH-HHHH-------H-HHHH------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGA----VG-LAWF-------A-LWMT------------------   70 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~----~~-~~~~-------~-~~~~------------------   70 (513)
                      .+...+...++..+..++.|.++||+ |.|..+...+.    +. ....       + +...                  
T Consensus        35 ~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~  113 (375)
T TIGR00899        35 IGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAR  113 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence            67777778888888888999999999 87765443211    11 0101       0 0000                  


Q ss_pred             ----------------HHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccc
Q psy13668         71 ----------------FATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTA  134 (513)
Q Consensus        71 ----------------~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  134 (513)
                                      ......+|..+++++++.+.+.. +||+.|++.+++.++..++..+++||.|++++..      
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  186 (375)
T TIGR00899       114 EHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA------  186 (375)
T ss_pred             HHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc------
Confidence                            00011255677778888888777 9999999988877766666555667654432111      


Q ss_pred             ccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHH
Q psy13668        135 VMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTY  214 (513)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~  214 (513)
                       .  +           +.+.++.+++++++......++..........++|.|+++.+|.+..+.+.+.........++.
T Consensus       187 -~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~  252 (375)
T TIGR00899       187 -L--T-----------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFM  252 (375)
T ss_pred             -c--C-----------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence             0  0           0112345667777666655555555555667789999998899999999988877777788889


Q ss_pred             HhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHH
Q psy13668        215 KMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGI  294 (513)
Q Consensus       215 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~  294 (513)
                      +..|++.||++||+....+.+...++...+...++ .+.......+.....+...+.......+..|++++.+.++.+..
T Consensus       253 ~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (375)
T TIGR00899       253 LLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNS-LWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNT  331 (375)
T ss_pred             HhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence            99999999999999877766655544444333322 22222222222222334445555667788888889999999999


Q ss_pred             HhHHhhHHHHHHHHhccc
Q psy13668        295 GALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       295 ~~i~~~igp~l~g~l~~~  312 (513)
                      .+++..++|.+.|.+.+.
T Consensus       332 ~~~g~~~g~~~~g~~~~~  349 (375)
T TIGR00899       332 GRVGWIIAGSVGGILAER  349 (375)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999988764

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.75  E-value=3.7e-16  Score=157.70  Aligned_cols=273  Identities=14%  Similarity=0.041  Sum_probs=181.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH-----------H--HHH-------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF-----------A--LWM-------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~-----------~--~~~-------------------   69 (513)
                      .+...+...++.+++.++.|.++||+ |.|.++.+...+..+..           +  ...                   
T Consensus        40 ~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  118 (377)
T TIGR00890        40 VAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVK  118 (377)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHH
Confidence            67788899999999999999999999 88887664221111000           0  000                   


Q ss_pred             -----------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccccc
Q psy13668         70 -----------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHK  138 (513)
Q Consensus        70 -----------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  138 (513)
                                 +...+..+|..+++++.+.+.+.. +||+.|.+.+++.++..+...++.+++|++.+..       + +
T Consensus       119 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~  189 (377)
T TIGR00890       119 WFPDKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKT-------N-I  189 (377)
T ss_pred             HcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHheecCchhcccc-------C-c
Confidence                       000001234444555555555666 9999999988888877766666665543321111       1 0


Q ss_pred             chhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhh
Q psy13668        139 SNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRT  218 (513)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g  218 (513)
                      +.       +.++.+.++.+++++++...+..++..........+.+.|.++ +|.+..+.+.+.....++..++++..|
T Consensus       190 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g  261 (377)
T TIGR00890       190 EV-------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLG  261 (377)
T ss_pred             cc-------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00       0011233677888888887777776666666666777777655 688888899999999999999999999


Q ss_pred             hhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHH-HHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHh
Q psy13668        219 ILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLA-VTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGA  296 (513)
Q Consensus       219 ~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~  296 (513)
                      ++.||++||+....+..+..++...+...+..... ......+.....+...+.......|.. ++++|++.|+.+....
T Consensus       262 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  341 (377)
T TIGR00890       262 ALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKA  341 (377)
T ss_pred             HHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHH
Confidence            99999999998888877777777666554432221 111122222223333344445555665 5679999999999999


Q ss_pred             HHhhHHHHHHHHhccc
Q psy13668        297 LSGTVSPYLVGVLTPN  312 (513)
Q Consensus       297 i~~~igp~l~g~l~~~  312 (513)
                      +++.++|.+.|.+.+.
T Consensus       342 ~g~~~~~~~~g~l~~~  357 (377)
T TIGR00890       342 VAGIFGGLIASHALTE  357 (377)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999988764

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.74  E-value=7.5e-17  Score=166.89  Aligned_cols=202  Identities=11%  Similarity=0.055  Sum_probs=129.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH----HHHH-----------HHHHHHHh-------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG----LAWF-----------ALWMTFAT-------------   73 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~----~~~~-----------~~~~~~~~-------------   73 (513)
                      .+...+...++..++.++.|++.||+ |.|..+.....+.    ....           ........             
T Consensus        63 ~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~  141 (438)
T TIGR00712        63 LGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGR  141 (438)
T ss_pred             hHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHH
Confidence            56778888999999999999999999 8776554311111    0000           00000000             


Q ss_pred             --------------------hhhhHHHHHHHHHHHHHh-ccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccc--hhc
Q psy13668         74 --------------------GAQIGNVVSMAVSGLLIR-YLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTH--YVA  130 (513)
Q Consensus        74 --------------------~~~~g~~~~~~~~~~l~~-~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~--~~~  130 (513)
                                          ...+|..+++++.+.... .. +||..|++.++++++..+...++.+|+|++.+.  .++
T Consensus       142 ~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  220 (438)
T TIGR00712       142 TMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN-DWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEE  220 (438)
T ss_pred             HHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchh
Confidence                                001344555555444333 35 999999998888877766666677776653211  100


Q ss_pred             ccccccccchhhhhccCCC--CCCc-hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH
Q psy13668        131 YGTAVMHKSNRFIFSFQNL--PPTP-WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN  207 (513)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~--~~~~-~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~  207 (513)
                      .+   ++...+..++.++.  .+.. .+.+++++.+|...+..++.+...++..+|+|.|+++..|+|+.++++......
T Consensus       221 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~  297 (438)
T TIGR00712       221 YR---NDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYE  297 (438)
T ss_pred             cc---cccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHH
Confidence            00   00000000000000  0001 124678899999888888888888899999999999988999999999999999


Q ss_pred             HHHHHHHHhhhhhcCCCcccc
Q psy13668        208 RSVIVTYKMRTILSGPRLTSP  228 (513)
Q Consensus       208 ~~~~ig~~~~g~l~dr~~~~~  228 (513)
                      +.+.++++..|+++||+++++
T Consensus       298 ~~~~ig~~~~g~l~dr~~~~~  318 (438)
T TIGR00712       298 YAGIPGTLLCGWMSDKVFKGN  318 (438)
T ss_pred             HHHHHHHHHHHHHHHHhccCc
Confidence            999999999999999986544

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.74  E-value=6.7e-16  Score=158.15  Aligned_cols=271  Identities=15%  Similarity=0.080  Sum_probs=176.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH----------------HH----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL----------------WM----------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~----------------~~----------------   69 (513)
                      .+...+...++..++.++.|++.||+ |.|.++.....+..+..+.                ..                
T Consensus        52 ~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~  130 (406)
T PRK11551         52 MGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSE  130 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            67788889999999999999999999 9888877532211111000                00                


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  +......+|..+++.++..+.+.. +||+.|++.+++.+...+...++.||+|++.+.. +     .+
T Consensus       131 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~-----~~  203 (406)
T PRK11551        131 AVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA-AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAA-G-----AG  203 (406)
T ss_pred             HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhcc-C-----cc
Confidence                        000111245566666666666666 9999999877766665555555666654321110 0     00


Q ss_pred             cchhhhhccCCCCCCchhhhcc---chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHH
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIAT---SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTY  214 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~  214 (513)
                      ++++.          ..+..++   .+..+..++..++.....+....|.|.++++ .|++..+.+.......++.++++
T Consensus       204 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~  272 (406)
T PRK11551        204 KQRAP----------VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGS  272 (406)
T ss_pred             hhhhh----------hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHH
Confidence            00000          0011222   2334444455555566677888899999987 69999999999999999999999


Q ss_pred             HhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHH
Q psy13668        215 KMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGG  293 (513)
Q Consensus       215 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~  293 (513)
                      +..|++.||.+||+....+.+...+++..+...++.....+..+..+.+ .....+.......+.. +++||++.|+.+.
T Consensus       273 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~  351 (406)
T PRK11551        273 LLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF-VVGGQSVLYALAPLFYPTQVRGTGVGAAVA  351 (406)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHcchhhhhhhhhHHHH
Confidence            9999999999999887776666656555555444333222222222222 2233444555556665 5679999999999


Q ss_pred             HHhHHhhHHHHHHHHhccc
Q psy13668        294 IGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       294 ~~~i~~~igp~l~g~l~~~  312 (513)
                      ..++++.++|.+.|.+.+.
T Consensus       352 ~~~~g~~~g~~~~g~l~~~  370 (406)
T PRK11551        352 VGRLGSMAGPLLAGQLLAL  370 (406)
T ss_pred             hhhHHHHHHhhhHhhhhcc
Confidence            9999999999999998874

>PRK03699 putative transporter; Provisional

Probab=99.74  E-value=2e-15  Score=154.04  Aligned_cols=268  Identities=12%  Similarity=0.059  Sum_probs=174.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH------HH-----HHHHHHH------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA------WF-----ALWMTFA------------------   72 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~------~~-----~~~~~~~------------------   72 (513)
                      .+...+...+|..++.++.|++.||+ |.|.++.....+..+      ..     .....+.                  
T Consensus        44 ~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~  122 (394)
T PRK03699         44 MSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITH  122 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhh
Confidence            56677788899999999999999999 888776532211100      00     0000000                  


Q ss_pred             ---------------hhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         73 ---------------TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        73 ---------------~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                     ....++..++|.+.+.+.....+||+.|.+.+++.++..++.+ . ++.|+..+..       ++
T Consensus       123 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~-~-~~~p~~~~~~-------~~  193 (394)
T PRK03699        123 VYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL-F-SEFPALGKHA-------PK  193 (394)
T ss_pred             hcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH-h-cCCccccccC-------cc
Confidence                           0001344566666666554323999999988877766544333 2 3333211111       10


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      ++       ++..    ++ ..+++++...+..++.....+.+..|+|.|+++.+|+|..+.+.+.+...++..+|++..
T Consensus       194 ~~-------~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  261 (394)
T PRK03699        194 AD-------KPVA----KE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIF  261 (394)
T ss_pred             cc-------Cccc----cc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHH
Confidence            00       0000    11 124667777777777777888899999999999999999999999999999999999999


Q ss_pred             hhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhH
Q psy13668        218 TILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGAL  297 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i  297 (513)
                      |+++||+++|+.......+..+.+..+...++........+..+. +.+...+.......+..|++++...+..+...++
T Consensus       262 g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  340 (394)
T PRK03699        262 SFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGF-FSSAIYTTIITLGSQQTKVASPKLVNFILTCGTI  340 (394)
T ss_pred             HHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhH
Confidence            999999999988777666655555554444433333222233322 2333444445555566677778888999999999


Q ss_pred             HhhHHHHHHHHhccc
Q psy13668        298 SGTVSPYLVGVLTPN  312 (513)
Q Consensus       298 ~~~igp~l~g~l~~~  312 (513)
                      |+.++|.+.|.+.+.
T Consensus       341 g~~i~p~~~G~l~~~  355 (394)
T PRK03699        341 GTMLTFVVTSPIVAH  355 (394)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988874

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.74  E-value=1.3e-15  Score=159.92  Aligned_cols=275  Identities=17%  Similarity=0.132  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH----HHHHH---------------HHHHHHhh------------
Q psy13668         26 MAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG----LAWFA---------------LWMTFATG------------   74 (513)
Q Consensus        26 ~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~----~~~~~---------------~~~~~~~~------------   74 (513)
                      .+...+|..++.++.|++.||+ |+|.++.+...+.    ++.+.               +...+..+            
T Consensus        63 ~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~  141 (490)
T PRK10642         63 FSVPFLIRPLGGLFFGMLGDKY-GRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASI  141 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHH
Confidence            4667799999999999999999 9998887532111    11100               00000001            


Q ss_pred             ---------------------hhhHHHHHHHHHHHHH--------hccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc
Q psy13668         75 ---------------------AQIGNVVSMAVSGLLI--------RYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES  125 (513)
Q Consensus        75 ---------------------~~~g~~~~~~~~~~l~--------~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~  125 (513)
                                           ...|..+++.+...+.        ..+ |||++|++.++++++ .++.....+|+|+..
T Consensus       142 ~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~-gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~  219 (490)
T PRK10642        142 FVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDW-GWRIPFFIALPLGII-GLYLRHALEETPAFQ  219 (490)
T ss_pred             HHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCc-cHHHHHHHHHHHHHH-HHHHHHcCCCChhHH
Confidence                                 0123333333322222        245 999999986655443 333333455554321


Q ss_pred             cchhcccccccccchhhhhccCCCCCCchhhhccc-hhHHH-HHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHh
Q psy13668        126 THYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATS-APVIG-LIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLIS  203 (513)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~  203 (513)
                      ...       ++.+++..+...+.++.++++++++ ++.+. .....++....+|++..|+|.|+++.+|++..+..+..
T Consensus       220 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~  292 (490)
T PRK10642        220 QHV-------DKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLII  292 (490)
T ss_pred             HHH-------HhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            111       0000000000001123345566653 33332 33334455677888999999999988899988888888


Q ss_pred             chhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH-HHHHHhcCC-hhHHHHH-HHHHHHHHHhhhhhhHHHhhcccC
Q psy13668        204 GWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG-ILAASYSGC-NRLAVTV-SFTLGMGTMGAFLPSLKVNALDLS  280 (513)
Q Consensus       204 ~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~-~~~l~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  280 (513)
                      ....++..++.+..|+++||+|||+....+.+...++ ...+..... +...... .+..+. +.+...+.......+++
T Consensus       293 ~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~g~~~~~~~~~~  371 (490)
T PRK10642        293 IAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAV-ILNCFTGVMASTLPAMF  371 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHC
Confidence            8888899999999999999999999877666543322 222222222 2222221 122222 12222333334444556


Q ss_pred             c-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        281 P-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       281 p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      | +.||++.|+.+..+.+++.++|.+.+.+.+
T Consensus       372 p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~  403 (490)
T PRK10642        372 PTHIRYSALAAAFNISVLVAGLTPTLAAWLVE  403 (490)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5 669999998777777888999999988775

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.74  E-value=7e-16  Score=155.74  Aligned_cols=287  Identities=13%  Similarity=0.034  Sum_probs=178.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-------H----HHHHh-----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-------W----MTFAT-----------------   73 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-------~----~~~~~-----------------   73 (513)
                      .+...+...++..++.++.|++.||+ |.|+++.....+..+....       +    ..+..                 
T Consensus        32 ~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  110 (379)
T TIGR00881        32 LGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTK  110 (379)
T ss_pred             HHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHH
Confidence            67788888999999999999999999 8887766432221111100       0    00000                 


Q ss_pred             ----------------hhhhHHHHHHH-HHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668         74 ----------------GAQIGNVVSMA-VSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM  136 (513)
Q Consensus        74 ----------------~~~~g~~~~~~-~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  136 (513)
                                      ...+|..++++ ++..+.+.. +||+.|++.+++.++..+...++.+++|++++.. +..+. +
T Consensus       111 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~  187 (379)
T TIGR00881       111 WFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY-SWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLP-PAEEM-P  187 (379)
T ss_pred             hcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC-CchhHHHHHHHHHHHHHHHHheeeCCCccccccC-ccccC-c
Confidence                            00256667773 555555666 9999999888877776666666666655432211 00000 0


Q ss_pred             ccchhhhhccC----CCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHH
Q psy13668        137 HKSNRFIFSFQ----NLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIV  212 (513)
Q Consensus       137 ~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~i  212 (513)
                      +++.+...+..    +..+...+.+++++.++...+..++.......+..|.|.|+++.+|++..+.+.......++..+
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  267 (379)
T TIGR00881       188 NEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLV  267 (379)
T ss_pred             ccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcch
Confidence            00000000000    11112345678889999888888888888889999999999999999999999999999999999


Q ss_pred             HHHhhhhhcCCCcc-cchhhHh-hH-HHHHHHHHHHhcCChhHHH--HHHHHHHHHHHhhhhhhHHHhhcccC-cchhHH
Q psy13668        213 TYKMRTILSGPRLT-SPFDFSA-SV-GPGLGILAASYSGCNRLAV--TVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGT  286 (513)
Q Consensus       213 g~~~~g~l~dr~~~-~~~~~~~-~~-~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~  286 (513)
                      ++++.|++.||..+ |+..... .. ...++.......+......  ...+..+.. .....+.......+.. +++||+
T Consensus       268 ~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~  346 (379)
T TIGR00881       268 GTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFL-VYGPQMLIGVIASELAPKKAAGT  346 (379)
T ss_pred             hHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHH-HhhhhHHHHHHHHHhcCcchhHH
Confidence            99999999998643 3332221 11 1222222222222222111  222222222 2222223334455555 567999


Q ss_pred             HHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668        287 LMALVGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       287 ~~gi~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      +.|+.+....+++.++|.+.|.+.|..
T Consensus       347 ~~g~~~~~~~~g~~~~~~~~g~l~~~~  373 (379)
T TIGR00881       347 AAGFVGFFAYLGGILAGLPLGYLADGF  373 (379)
T ss_pred             HHHHHHHhhhhhhhhhhhhHHHHHHhh
Confidence            999999999999999999999988743

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.74  E-value=3.2e-15  Score=152.44  Aligned_cols=266  Identities=13%  Similarity=0.093  Sum_probs=172.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-------HH-------------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-------WM-------------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-------~~-------------------------   69 (513)
                      .+...+...++..++.++.|.+.||+ |+|.++.....+..+....       +.                         
T Consensus        57 ~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~  135 (394)
T PRK10213         57 AGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMR  135 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            56677788999999999999999999 9998876433222111100       00                         


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  +......+|..++|++++.+.+.. |||+.|++.++++++..+......|+.|+++          ++
T Consensus       136 ~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~----------~~  204 (394)
T PRK10213        136 LVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRNVFNAAAVMGVLCIFWIIKSLPSLPGEP----------SH  204 (394)
T ss_pred             HcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHHHHHHCCCCCccc----------cc
Confidence                        111111356778888999888888 9999999887766654433333334332111          00


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      .            ..+.++.+++|+++...+..++.....+...++.++++.+.+|++..+.+.......++..+++++.
T Consensus       205 ~------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~  272 (394)
T PRK10213        205 Q------------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLS  272 (394)
T ss_pred             c------------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHH
Confidence            0            0112567889999887777667667777777787555556679999999999999999999999999


Q ss_pred             hhhcCCCcccchhhHhhHHHHHH-HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHh
Q psy13668        218 TILSGPRLTSPFDFSASVGPGLG-ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGA  296 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~  296 (513)
                      +++.||.+++ ...........+ +.+....+.........+..+. ..+...+.......+..|++.+.+.+......+
T Consensus       273 ~~l~~r~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (394)
T PRK10213        273 SFILKRSVKL-ALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL-TFALVPVGWSTWITRSLADQAEKAGSIQVAVIQ  350 (394)
T ss_pred             HHHHhccchh-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHH
Confidence            9999995444 333333332333 2322222222222222222222 234444555545555567778888888888889


Q ss_pred             HHhhHHHHHHHHhccch
Q psy13668        297 LSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       297 i~~~igp~l~g~l~~~~  313 (513)
                      ++..+||.+.|.+.|..
T Consensus       351 lg~~~G~~l~G~l~~~~  367 (394)
T PRK10213        351 LANTCGAAIGGYALDNI  367 (394)
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            99999999999998743

>TIGR00897 2A0118 polyol permease family

Probab=99.74  E-value=2e-15  Score=154.39  Aligned_cols=272  Identities=18%  Similarity=0.121  Sum_probs=170.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH----H-----------HHHHHHHHhh------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA----W-----------FALWMTFATG------------   74 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~----~-----------~~~~~~~~~~------------   74 (513)
                      .+...+.+.++..++.++.|.+.||+ |.|.++.....+..+    .           .........+            
T Consensus        50 ~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~  128 (402)
T TIGR00897        50 SASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLV  128 (402)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHH
Confidence            67778889999999999999999999 888877642211110    0           0000000000            


Q ss_pred             ---------------------hhhHH-HHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccc
Q psy13668         75 ---------------------AQIGN-VVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG  132 (513)
Q Consensus        75 ---------------------~~~g~-~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  132 (513)
                                           ..+|. .+++++++.+.+.. ||+..++..........++..++.++++++++ .    
T Consensus       129 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----  202 (402)
T TIGR00897       129 WVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF-GEMNTLWSALAFVLTGGVIALFSNKDIFTPQH-M----  202 (402)
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-chHHHHHHHHHHHHHHHHHHHhccCCCCCccc-c----
Confidence                                 01333 35566666776666 87665554333333333333344454322111 0    


Q ss_pred             ccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHH
Q psy13668        133 TAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIV  212 (513)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~i  212 (513)
                         +++++      .++.+..+++++++|+++...+..++.....+++.+|.|.|+++ +|++..+.+.+.....+++.+
T Consensus       203 ---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~i  272 (402)
T TIGR00897       203 ---QTREK------FSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIV  272 (402)
T ss_pred             ---cCCcc------hhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHH
Confidence               10000      00001124568899999988888888888889999999999866 799999999888889999999


Q ss_pred             HHHhhhhhcCCCcccchhh-HhhHHHHHHHHHHHh---c-CChhHHH-HHHHHHHHHHHhhhhhhHHHhhcccCcchhHH
Q psy13668        213 TYKMRTILSGPRLTSPFDF-SASVGPGLGILAASY---S-GCNRLAV-TVSFTLGMGTMGAFLPSLKVNALDLSPNYAGT  286 (513)
Q Consensus       213 g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~~l~~---~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~  286 (513)
                      +++..|+++||++||+... .+.+...++...+..   . ..+.... +..+..+.+... ..+ ......+..|+++|+
T Consensus       273 g~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~-~~~~~~~~~~~~~g~  350 (402)
T TIGR00897       273 FNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAG-YVP-LAAVFPTLAPKHKGA  350 (402)
T ss_pred             HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHH-HHH-HHHHHHhhCcchhHH
Confidence            9999999999999887653 233333333222221   1 1222222 222223332222 223 334556777899999


Q ss_pred             HHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        287 LMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       287 ~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      +.|+.|...++++.++|.+.|.+.+.
T Consensus       351 ~~g~~~~~~~lg~~~gp~i~g~l~~~  376 (402)
T TIGR00897       351 AMSVLNLSAGLSAFLAPAIAVLFIGF  376 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999998874

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.73  E-value=3.3e-15  Score=151.57  Aligned_cols=269  Identities=13%  Similarity=0.072  Sum_probs=180.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-------HH-------------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-------WM-------------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-------~~-------------------------   69 (513)
                      .+...+...++..++.++.|.+.||+ |.|..+.....+..+....       +.                         
T Consensus        42 ~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~  120 (385)
T TIGR00710        42 VQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRD  120 (385)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHH
Confidence            67788888999999999999999999 8887766422111111100       00                         


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  .......+|..+++.+++.+.+.. +||+.|.+.++..++..+...+..||.+++++..       ++
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~  192 (385)
T TIGR00710       121 IYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-SWHAIFAFLSLAGILLSALIFFILPETLPYEARI-------QI  192 (385)
T ss_pred             hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC-------CH
Confidence                        000011355677788888888777 9999999888777766655555555543221110       00


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      +  +        ....+++.+++++++...+...+.....+....+.|.++++.+|+++.+.+.+.....++..+++++.
T Consensus       193 ~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~  262 (385)
T TIGR00710       193 S--T--------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLN  262 (385)
T ss_pred             H--H--------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            0  0        01123567888988888877777777788888899999998899999999999999999999999999


Q ss_pred             hhhcCCCcccchhhHhhHHHHHHHHHHHhcC--C-hhHHH-HHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHH
Q psy13668        218 TILSGPRLTSPFDFSASVGPGLGILAASYSG--C-NRLAV-TVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGG  293 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~--~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~  293 (513)
                      |++.||+++|+....+.....++...+....  . ..... .....+.....+...+.......|..|+++|++.++.+.
T Consensus       263 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  342 (385)
T TIGR00710       263 GRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGT  342 (385)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHH
Confidence            9999999999887777666555544443321  1 12222 222222222234444555556666678889999999999


Q ss_pred             HHhHHhhHHHHHHHHh
Q psy13668        294 IGALSGTVSPYLVGVL  309 (513)
Q Consensus       294 ~~~i~~~igp~l~g~l  309 (513)
                      ....++.+.+.+.+.+
T Consensus       343 ~~~~~g~i~~~~~~~~  358 (385)
T TIGR00710       343 LRLVLGAIVGYLVSLI  358 (385)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            8887777776666633

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.73  E-value=3.2e-15  Score=152.47  Aligned_cols=213  Identities=12%  Similarity=-0.004  Sum_probs=142.0

Q ss_pred             hhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchh
Q psy13668         76 QIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWG  155 (513)
Q Consensus        76 ~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (513)
                      ++|.+++|++++.+.++. |||..|.+.++..++..+...++.||.+++++..       + ++.+              
T Consensus       153 ~lg~~~g~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~--------------  209 (393)
T PRK15011        153 SLAWVIGPPLAYALAMGF-SFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLA-------T-GTLE--------------  209 (393)
T ss_pred             HHHHHHhhHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccc-------c-cccc--------------
Confidence            356778888888888888 9999999988887777766666667654332211       1 0000              


Q ss_pred             hhccc-hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668        156 KIATS-APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS  234 (513)
Q Consensus       156 ~~l~~-~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~  234 (513)
                      ...++ +..+......+......+.+..+.|.|+++.+|++..+.+.+.....+..++++++.|+++||++||+....+.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~  289 (393)
T PRK15011        210 APRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAA  289 (393)
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence            00111 12233333334444455566779999999999999999998888777888899999999999999998766655


Q ss_pred             HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        235 VGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       235 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      ....+....+...+ +....+....+.....+...+.......+..|+++|++.++.+...++|..++|.+.|.+.+.
T Consensus       290 ~~~~~~~~~~~~~~-~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~  366 (393)
T PRK15011        290 VAGVCFYAGMLMAH-SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEI  366 (393)
T ss_pred             HHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            54444433333322 222222222222223333333444556777888899999999999999999999999988764

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.73  E-value=8.8e-16  Score=149.65  Aligned_cols=218  Identities=17%  Similarity=0.088  Sum_probs=176.8

Q ss_pred             hHHHHHHHHHHHHHhccCC---chHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCc
Q psy13668         77 IGNVVSMAVSGLLIRYLGG---WTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTP  153 (513)
Q Consensus        77 ~g~~~~~~~~~~l~~~~~g---Wr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (513)
                      +|..+...++..+.... +   ||....+..+..++..+..++..+|.|+.++..       ++.+.           .+
T Consensus       150 ~G~av~q~~~P~v~~~~-g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~-------~~~~~-----------~~  210 (417)
T COG2223         150 LGVAVAQLVAPLVAVAF-GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV-------KPQLP-----------AQ  210 (417)
T ss_pred             ccHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc-------cccch-----------hH
Confidence            45555556666666666 7   999988888888887777788888887754333       21110           22


Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668        154 WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA  233 (513)
Q Consensus       154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~  233 (513)
                      .+.++++++.|.+++.++....++.++..++|.|++++++.+..+++.+.....+.+.+.++.+|+++||+|.+|+....
T Consensus       211 ~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~  290 (417)
T COG2223         211 LKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAV  290 (417)
T ss_pred             HHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHH
Confidence            36788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhcC------ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        234 SVGPGLGILAASYSG------CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       234 ~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      +..++++...+.+..      .+.......+.....+.+............++|++.|.+.|+...++.+|+..-|...|
T Consensus       291 f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g  370 (417)
T COG2223         291 FVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFG  370 (417)
T ss_pred             HHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHH
Confidence            998888888877665      22333344444455566777778888888999999999999999999999999999998


Q ss_pred             Hhccch
Q psy13668        308 VLTPNW  313 (513)
Q Consensus       308 ~l~~~~  313 (513)
                      ...+..
T Consensus       371 ~~~~~t  376 (417)
T COG2223         371 VSLDLT  376 (417)
T ss_pred             HHHHhc
Confidence            887754

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.73  E-value=4.1e-15  Score=152.39  Aligned_cols=272  Identities=17%  Similarity=0.060  Sum_probs=179.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH-----------HHHHHH-------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF-----------ALWMTF-------------------   71 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~-----------~~~~~~-------------------   71 (513)
                      .+...+...++..++.++.|.+.||+ |.|.++.....+..+..           +....+                   
T Consensus        50 ~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~  128 (406)
T PRK15402         50 VPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQE  128 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHH
Confidence            56667889999999999999999999 88887664221111000           000000                   


Q ss_pred             --------------HhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         72 --------------ATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        72 --------------~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                    ......+..++|.+++.+.+.. +||+.|++.+++.++..+...+..||++++.+.        +.
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~  199 (406)
T PRK15402        129 SFEEADAIKITALMANVALLAPLLGPLVGAALIHVL-PWRGMFVLFAALAALSFFGLWRAMPETAGRVGE--------KL  199 (406)
T ss_pred             HhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHHHHHHHHhCCCCCccccc--------cc
Confidence                          0000134466777777777777 999999988877776655554455544321110        00


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      +.++.        ..+++.++++++++...+..++.....+...++.|.++++.+|+++.+.+.......++..++++..
T Consensus       200 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~  271 (406)
T PRK15402        200 SLKEL--------GRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTL  271 (406)
T ss_pred             cHHHH--------HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            00000        1123567889999888887777777677777889999988899999999988888888899999999


Q ss_pred             hhhcCCCcccchhhHhhHHHHHHHHHHHhcC---C-hhHHHHH-HHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHH
Q psy13668        218 TILSGPRLTSPFDFSASVGPGLGILAASYSG---C-NRLAVTV-SFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVG  292 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~---~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~  292 (513)
                      |+++||+++|+....+.+...++...+....   . +...... ....+.+ .+...+..........++++|++.++.+
T Consensus       272 g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g-~~~~~~~~~~~~~~~~~~~~g~~~~~~~  350 (406)
T PRK15402        272 ARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFG-IGLANAGLYRLTLFSSDVSKGTVSAAMG  350 (406)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH-HHHHhhhHHHHHhhhccccccHHHHHHH
Confidence            9999999999888777766665555544321   1 2222222 2222222 2222333333334445688999999999


Q ss_pred             HHHhHHhhHHHHHHHHhccc
Q psy13668        293 GIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       293 ~~~~i~~~igp~l~g~l~~~  312 (513)
                      ....++..+|+.+.+.+.+.
T Consensus       351 ~~~~~~~~~g~~~~~~l~~~  370 (406)
T PRK15402        351 MLSMLIFTVGIELSKHAYLG  370 (406)
T ss_pred             HHHHHHHHHHHHHHHhcccC
Confidence            99999999999999888764

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.72  E-value=1.5e-15  Score=153.04  Aligned_cols=269  Identities=15%  Similarity=0.048  Sum_probs=169.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH------HHH--HH----HHHHhh---------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA------WFA--LW----MTFATG---------------   74 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~------~~~--~~----~~~~~~---------------   74 (513)
                      .+...+...++.+++.++.|+++||+ |.|.++.+...+..+      +.-  .+    ..+..+               
T Consensus        39 ~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  117 (366)
T TIGR00886        39 LGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISF  117 (366)
T ss_pred             hhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHH
Confidence            67788889999999999999999999 888776542211111      000  00    000000               


Q ss_pred             -----------------hhhHHHHHHHHHHHHHh----------ccCCchHHH-HHHHHHHHHHHHHHHHhccCCCCCcc
Q psy13668         75 -----------------AQIGNVVSMAVSGLLIR----------YLGGWTSVF-YVFGAVGLAWFALWMTFASSDPSEST  126 (513)
Q Consensus        75 -----------------~~~g~~~~~~~~~~l~~----------~~~gWr~~f-~i~~~~~~~~~~~~~~~~~~~p~~~~  126 (513)
                                       ...|..+++.+++.+..          .. +||+.| ...+++..+..++...+.+++|++++
T Consensus       118 ~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (366)
T TIGR00886       118 FFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHL-AWGWAFVIVPAGILLLPALLIFFVGADTPPGKP  196 (366)
T ss_pred             hcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccc-cccchhHHHHHHHHHHHHHHHHHhcccCCcccc
Confidence                             01334444444443332          23 899999 44455555555555555566554322


Q ss_pred             chhcccccccccchh-hhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhch
Q psy13668        127 HYVAYGTAVMHKSNR-FIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGW  205 (513)
Q Consensus       127 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~  205 (513)
                      +.       .+.+.+ .....++......++.+++++++...+..++.....+.+..+.|.|+++.+|++..+++.+...
T Consensus       197 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  269 (366)
T TIGR00886       197 AT-------GKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASL  269 (366)
T ss_pred             cc-------hhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence            11       100000 0000000001134667888999888888887777788889999999999999999999999999


Q ss_pred             hHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC---hhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc
Q psy13668        206 PNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGC---NRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN  282 (513)
Q Consensus       206 ~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  282 (513)
                      ..+.+.+++++.|+++||+++|+....+......+...+.....   +.......+.......+...+.......++.|+
T Consensus       270 ~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  349 (366)
T TIGR00886       270 GGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR  349 (366)
T ss_pred             HHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchh
Confidence            99999999999999999999988776666555555444443322   333333333333344455555566667778889


Q ss_pred             hhHHHHHHHHHHHhHHh
Q psy13668        283 YAGTLMALVGGIGALSG  299 (513)
Q Consensus       283 ~~g~~~gi~~~~~~i~~  299 (513)
                      ++|+++|+.+..+++|+
T Consensus       350 ~~g~~~g~~~~~~~~g~  366 (366)
T TIGR00886       350 ATGAVSGLVGAIGNLGG  366 (366)
T ss_pred             hcccHHHHHHHhccCCC
Confidence            99999999999887763

>KOG2533|consensus

Probab=99.71  E-value=3.9e-16  Score=160.39  Aligned_cols=197  Identities=17%  Similarity=0.135  Sum_probs=150.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH-----------------------------------
Q psy13668         21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF-----------------------------------   65 (513)
Q Consensus        21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~-----------------------------------   65 (513)
                      -.+...+.+.+|.+++.+.++.|.||+ +-+......+++...+.                                   
T Consensus        82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg  160 (495)
T KOG2533|consen   82 QLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILG  160 (495)
T ss_pred             hhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHH
Confidence            367788889999999999999999999 64444443332221111                                   


Q ss_pred             ---------HHHHHHHhhhhhHHHHHHHHHHHHHh-----ccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668         66 ---------ALWMTFATGAQIGNVVSMAVSGLLIR-----YLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY  131 (513)
Q Consensus        66 ---------~~~~~~~~~~~~g~~~~~~~~~~l~~-----~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  131 (513)
                               ..+.++....++|+++++++...+.+     ...||||.|++.|++.++..++.++++|+.|++....   
T Consensus       161 ~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl---  237 (495)
T KOG2533|consen  161 NWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFL---  237 (495)
T ss_pred             hhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhcccc---
Confidence                     11224444446888888888777532     1239999999999999999999999999999876544   


Q ss_pred             cccccccchhh----hh-cc-----CCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhH
Q psy13668        132 GTAVMHKSNRF----IF-SF-----QNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDL  201 (513)
Q Consensus       132 ~~~~~~~~~~~----~~-~~-----~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~  201 (513)
                          +++|+..    .+ +.     ++.++..+++.++++.+|...+..++.....+++.+|+|.|+.+..|+|..++..
T Consensus       238 ----~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~  313 (495)
T KOG2533|consen  238 ----TDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANL  313 (495)
T ss_pred             ----chHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhcc
Confidence                4333211    11 11     1123456788899999999999999999999999999999999966799999999


Q ss_pred             HhchhHHHHHHHHHhhhhhcCCCc
Q psy13668        202 ISGWPNRSVIVTYKMRTILSGPRL  225 (513)
Q Consensus       202 ~~~~~~~~~~ig~~~~g~l~dr~~  225 (513)
                      +.++..++++++.+++|+++||..
T Consensus       314 ls~~~~~~g~v~~i~ag~lsdr~~  337 (495)
T KOG2533|consen  314 LSTPYDVGGIVGLILAGYLSDRLK  337 (495)
T ss_pred             ccchHHhhhHHHHHHHHHHHHHHh
Confidence            999999999999999999999953

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.71  E-value=5.3e-15  Score=150.99  Aligned_cols=284  Identities=15%  Similarity=0.092  Sum_probs=165.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH----------------HHH----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA----------------LWM----------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~----------------~~~----------------   69 (513)
                      .+...+...++.+++.++.|++.||+ |.|.++.....+..+...                +..                
T Consensus        49 ~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~  127 (405)
T TIGR00891        49 AASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIE  127 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence            56778888999999999999999999 888877643221111000                000                


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYL-GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM  136 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~-~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  136 (513)
                                  +......+|..+++.+.+.+.+.. .+||+.|.+.++..++.. +.....||+++.++...+     +
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~  201 (405)
T TIGR00891       128 SWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAG-----K  201 (405)
T ss_pred             hCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhh-----h
Confidence                        011111356677777777776655 149999987554443332 333344544321111100     0


Q ss_pred             ccchhhhhc---cCCCCC-------Cchhhhc-cc-hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhc
Q psy13668        137 HKSNRFIFS---FQNLPP-------TPWGKIA-TS-APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISG  204 (513)
Q Consensus       137 ~~~~~~~~~---~~~~~~-------~~~~~~l-~~-~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~  204 (513)
                      ++.++...+   .+...+       ...++.. +. +.+........+.+........+.|.|+.+.+|++..+.+.+..
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~  281 (405)
T TIGR00891       202 ALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVV  281 (405)
T ss_pred             hhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHH
Confidence            000000000   000000       0000000 01 11222333334444555567788999999889999999999999


Q ss_pred             hhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-ch
Q psy13668        205 WPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NY  283 (513)
Q Consensus       205 ~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~  283 (513)
                      ...++.++++++.|++.||++||+....+.....+....+.....+.........+...+.....+.......+..| ++
T Consensus       282 ~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (405)
T TIGR00891       282 FSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ  361 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch
Confidence            99999999999999999999999887776665533333222222332222222122122222333444455566665 67


Q ss_pred             hHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        284 AGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       284 ~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      +|++.|+.+...++++.++|.+.|.+.|.
T Consensus       362 ~~~~~g~~~~~~~~g~~~g~~~~g~l~~~  390 (405)
T TIGR00891       362 RAAGLGFTYQLGNLGGALAPIIGALLAQR  390 (405)
T ss_pred             hHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999998874

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.71  E-value=8.3e-15  Score=151.34  Aligned_cols=157  Identities=9%  Similarity=0.002  Sum_probs=106.7

Q ss_pred             chhhhccchhHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhh
Q psy13668        153 PWGKIATSAPVIGLIIAQIG-HDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDF  231 (513)
Q Consensus       153 ~~~~~l~~~~~~~~~l~~~~-~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~  231 (513)
                      ++++++++++.+...+..++ ....+|.+.+|+|.|+++.+|++..+.+.......+...++.++.|+++||++||+...
T Consensus       234 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~  313 (432)
T PRK10406        234 SLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSML  313 (432)
T ss_pred             cHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH
Confidence            45778888888876665554 36778889999999999888999999988888888888888999999999999998776


Q ss_pred             HhhHHHHHHHHHHH--hc-CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhH-HhhHHHHHH
Q psy13668        232 SASVGPGLGILAAS--YS-GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGAL-SGTVSPYLV  306 (513)
Q Consensus       232 ~~~~~~~~~~~~l~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i-~~~igp~l~  306 (513)
                      ....+..+......  .. ..+....+.++.++....+...+.......|.+| +.|+++.|+.+..+++ .+...|.+.
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~  393 (432)
T PRK10406        314 CFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVA  393 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHH
Confidence            65544333322111  11 1222222222222323333334445566778886 5699999999987765 355577766


Q ss_pred             HHh
Q psy13668        307 GVL  309 (513)
Q Consensus       307 g~l  309 (513)
                      +.+
T Consensus       394 ~~l  396 (432)
T PRK10406        394 LSL  396 (432)
T ss_pred             HHH
Confidence            643

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.70  E-value=4.2e-15  Score=153.25  Aligned_cols=280  Identities=14%  Similarity=0.038  Sum_probs=166.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-----------HHH---------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-----------LWM---------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-----------~~~---------------------   69 (513)
                      .+...+...++..++.++.|+++||+ |.|.++.....+..+...           ...                     
T Consensus        55 ~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~  133 (426)
T PRK12307         55 GAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVE  133 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            46677788999999999999999999 988887643221111000           000                     


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  +...+..+|.++++.+.+.+.+.. +||+.|++.....++ .+   ++....|++++...+ .   .+
T Consensus       134 ~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-~w~~~f~i~~~~~~~-~~---~~~~~~p~~~~~~~~-~---~~  204 (426)
T PRK12307        134 SWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-GWRAAFFVGLLPVLL-VI---YIRARAPESKEWEEA-K---LS  204 (426)
T ss_pred             hCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-CHHHHHHHHHHHHHH-HH---HHHHHCCCChHHHHh-h---hh
Confidence                        000111245566666666666666 999999874332222 11   111222222111100 0   00


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHH---HHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHH
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIA---QIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTY  214 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~---~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~  214 (513)
                      ++.+..++..+....+++++++++.++.....   .+......+.+..++|.|+++ .|++..+.+...+...++..+++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~  283 (426)
T PRK12307        205 GKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGN  283 (426)
T ss_pred             ccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH
Confidence            00000000000011245677888776543332   223333444567899999987 59999999998889999999999


Q ss_pred             HhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH-hhhhhhHHHhhcccCc-chhHHHHHHHH
Q psy13668        215 KMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTM-GAFLPSLKVNALDLSP-NYAGTLMALVG  292 (513)
Q Consensus       215 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p-~~~g~~~gi~~  292 (513)
                      +..|++.||++||+....+.+...+..+.+...+...........++.++. ....+.......|..| +++|++.|+.+
T Consensus       284 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~  363 (426)
T PRK12307        284 IVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIY  363 (426)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHH
Confidence            999999999999998877776665555444433322222222222222221 1222334445566665 56999999999


Q ss_pred             HHHhHHhhHHHHHHHHhccc
Q psy13668        293 GIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       293 ~~~~i~~~igp~l~g~l~~~  312 (513)
                      ....+++.++|.+.|.+.+.
T Consensus       364 ~~~~~~~~~gp~~~g~l~~~  383 (426)
T PRK12307        364 NLAATSGTFNSMAATWLGIT  383 (426)
T ss_pred             HHHhHHHHHHHHHHHHHHHc
Confidence            99999999999999888754

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.70  E-value=7.3e-16  Score=154.17  Aligned_cols=269  Identities=22%  Similarity=0.280  Sum_probs=180.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-------HH-------------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-------WM-------------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-------~~-------------------------   69 (513)
                      .++..+...++..++.++.|.+.||+ |.|.++.+...+..+...+       +.                         
T Consensus        34 ~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~  112 (352)
T PF07690_consen   34 IGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIAD  112 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccc
Confidence            77888889999999999999999999 8888766422211111000       00                         


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  +......+|..+++.+++.+.+.. +||+.|++.+++.++..++..++.+++|++++..       ++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~-------~~  184 (352)
T PF07690_consen  113 WFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWRWAFLISAILSLIAAILFILFLPEPPPPRERE-------SP  184 (352)
T ss_dssp             CCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHCCHHHHHHHHHHHHHHHHHCCC---STTTT---------SS
T ss_pred             cchhhhhhhccccccchhhhhhhcccchhhhhhhcc-ccccccccccchhhhhhhhHhhhhhhcccccccc-------cc
Confidence                        000111367788888888887776 9999999988888887765444555544433222       11


Q ss_pred             cchhhhhccCCCCCC-chhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcc-hhhhhHHhchhHHHHHHHHH
Q psy13668        138 KSNRFIFSFQNLPPT-PWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFS-ITSVDLISGWPNRSVIVTYK  215 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s-~~~~~~~~~~~~~~~~ig~~  215 (513)
                      ++++.   +.+.+.. .++.+.+++.+|......+......+....++|.|+++.+|++ ..+.+.......+...++++
T Consensus       185 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (352)
T PF07690_consen  185 KESES---KKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSL  261 (352)
T ss_dssp             TTTT-----HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccc---ccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            11100   0000111 2456667777775555556656677788999999988889999 88999999999999999999


Q ss_pred             hhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC--hhHHHH-HHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHH
Q psy13668        216 MRTILSGPRLTSPFDFSASVGPGLGILAASYSGC--NRLAVT-VSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALV  291 (513)
Q Consensus       216 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~  291 (513)
                      +.|++.||.++|+..........+....+.....  +..... ..+..+. ..+...+.......+..| +++|++.|+.
T Consensus       262 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~  340 (352)
T PF07690_consen  262 LAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGF-GFGIVFPILFSLIQELVPPEYRGTAFGLF  340 (352)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHH-HHHHHCHHHHHHHHCCCHTCHHHHHHHHH
T ss_pred             HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            9999999999887777666666655555544332  223332 3333333 455566777777777775 7799999999


Q ss_pred             HHHHhHHhhHHH
Q psy13668        292 GGIGALSGTVSP  303 (513)
Q Consensus       292 ~~~~~i~~~igp  303 (513)
                      +...++++.++|
T Consensus       341 ~~~~~~~~~igP  352 (352)
T PF07690_consen  341 NSIGSLGGIIGP  352 (352)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCC
Confidence            999999999987

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.69  E-value=2.9e-14  Score=144.79  Aligned_cols=272  Identities=10%  Similarity=-0.013  Sum_probs=183.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCchH----HHHHHH-HHHHH---HH-HHHHH---------HH----------
Q psy13668         21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTS----VFYVFG-AVGLA---WF-ALWMT---------FA----------   72 (513)
Q Consensus        21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~----if~~~g-~~~~~---~~-~~~~~---------~~----------   72 (513)
                      ..++..+...+...+++++.|.++|+. |++.    +..... .....   .. -.|.+         ..          
T Consensus        40 ~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al  118 (382)
T TIGR00902        40 MIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDAL  118 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHH
Confidence            367788888999999999999999999 6422    221111 11110   00 00000         00          


Q ss_pred             ----------------hhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668         73 ----------------TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM  136 (513)
Q Consensus        73 ----------------~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  136 (513)
                                      ....+|.+++|++++.+.+.. |||..|.+....... .+... ..++++++++..       +
T Consensus       119 ~~~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~-g~~~~f~~~~~~~~~-~~~~~-~~~~~~~~~~~~-------~  188 (382)
T TIGR00902       119 ANTWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF-DEQNILAILTAGLAF-MLIGF-LIKPTIPPKDAI-------P  188 (382)
T ss_pred             HHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc-ChhHHHHHHHHHHHH-HHHHH-HcCCCCCCCccc-------c
Confidence                            001367888999999999988 999999876554322 22222 223321111000       0


Q ss_pred             ccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHh
Q psy13668        137 HKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKM  216 (513)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~  216 (513)
                      ++        ++.+..+.++++|+|+++...+..++...+...+..+.|.|+++ +|.+..+.+.+.....++.+++.+.
T Consensus       189 ~~--------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~  259 (382)
T TIGR00902       189 ED--------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAF  259 (382)
T ss_pred             cc--------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHH
Confidence            00        00111234788999999999988888888888999999999987 7999999999999888999999999


Q ss_pred             hhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHH-HH
Q psy13668        217 RTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGG-IG  295 (513)
Q Consensus       217 ~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~-~~  295 (513)
                      .+++.||++.|+.+..+.+...+....+...++........+..+..+...... ......+.+++++++..++.+. ..
T Consensus       260 ~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~-~~~~i~~~~~~~~~~~q~~~~~~~~  338 (382)
T TIGR00902       260 SNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLA-AMRYIAAQPGSEIAKLQALYNALAM  338 (382)
T ss_pred             hHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHhhHHHHHHHHHHHHH
Confidence            999999999999999888888888877766554443333444444444333333 3444445556678999999774 56


Q ss_pred             hHHhhHHHHHHHHhccch
Q psy13668        296 ALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       296 ~i~~~igp~l~g~l~~~~  313 (513)
                      .++..++|.+.|.+.|..
T Consensus       339 g~g~~~g~~~~G~l~~~~  356 (382)
T TIGR00902       339 GGLIAIFTAFAGFIYPTL  356 (382)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            799999999999888754

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>TIGR00896 CynX cyanate transporter

Probab=99.69  E-value=2.9e-14  Score=143.34  Aligned_cols=268  Identities=13%  Similarity=0.034  Sum_probs=171.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH---HHH-------HH-----HH----------------
Q psy13668         21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL---AWF-------AL-----WM----------------   69 (513)
Q Consensus        21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~---~~~-------~~-----~~----------------   69 (513)
                      ..+...+...++..++.++.|++.||+ |.|.++.....+..   ...       +.     ..                
T Consensus        36 ~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~  114 (355)
T TIGR00896        36 VAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIRSAPGTALLFAGTALIGVGIAIINVLLPSLIKR  114 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence            367888899999999999999999999 88877664221110   000       00     00                


Q ss_pred             -----------HHHhhhhhHHHHHHHHHHHHHhccC-CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 -----------TFATGAQIGNVVSMAVSGLLIRYLG-GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 -----------~~~~~~~~g~~~~~~~~~~l~~~~~-gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                 .......+|..+++.+.+.+.+... +||+.|.+.++..++....   +.++.+++++..       ++
T Consensus       115 ~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~  184 (355)
T TIGR00896       115 DFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA---WIPQVRRRVAAN-------QT  184 (355)
T ss_pred             hCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH---HhhhhccccCCC-------CC
Confidence                       0000012445566666666655431 4999988766554433222   223221111000       00


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                                 .++.+.++++|++.++...+..++....++....|+|.|+++ +|++..+.+.+.+...++.+++++..
T Consensus       185 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~  252 (355)
T TIGR00896       185 -----------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLI  252 (355)
T ss_pred             -----------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhH
Confidence                       001123567888888887777777777888889999999987 59999999999999999999999999


Q ss_pred             hhhcCCCc-ccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhc-ccC-cchhHHHHHHHHHH
Q psy13668        218 TILSGPRL-TSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNAL-DLS-PNYAGTLMALVGGI  294 (513)
Q Consensus       218 g~l~dr~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-p~~~g~~~gi~~~~  294 (513)
                      |++.||++ ||+....+....+++...+...+...... .....+. ..+...+....... +.. +++++...++.+..
T Consensus       253 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  330 (355)
T TIGR00896       253 PALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGL-GQGGAFPLALTLIGLRSRQAAQAAALSAMAQSI  330 (355)
T ss_pred             HHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHH-hhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence            99999994 55566666666666665555544332221 2222222 23344444434333 333 45689999999999


Q ss_pred             HhHHhhHHHHHHHHhccch
Q psy13668        295 GALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       295 ~~i~~~igp~l~g~l~~~~  313 (513)
                      +++++.++|.+.|.+.|..
T Consensus       331 ~~~~~~~gp~~~G~l~~~~  349 (355)
T TIGR00896       331 GYLLAALGPLFVGVLHDIS  349 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999988744

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>TIGR00895 2A0115 benzoate transport

Probab=99.69  E-value=1.5e-14  Score=147.20  Aligned_cols=284  Identities=17%  Similarity=0.097  Sum_probs=169.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-----------HH---------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-----------WM---------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-----------~~---------------------   69 (513)
                      .+...+...++.+++.++.|++.||+ |.|.++.....+..+....           ..                     
T Consensus        54 ~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  132 (398)
T TIGR00895        54 LGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSE  132 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHH
Confidence            56777788899999999999999999 8887766432211111100           00                     


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccch-hcc-cccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHY-VAY-GTAV  135 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~-~~~~  135 (513)
                                  +......+|..+++.+.+.+.+.. |||..|++.+++..+..++...+.++.++..... .+. .+..
T Consensus       133 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (398)
T TIGR00895       133 YAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIV  211 (398)
T ss_pred             HcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-cceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHH
Confidence                        000011256677788888888777 9999999887666665555555666654311000 000 0000


Q ss_pred             c--------ccchhhhhccCC-C-CCCchhhhcc---chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHH
Q psy13668        136 M--------HKSNRFIFSFQN-L-PPTPWGKIAT---SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLI  202 (513)
Q Consensus       136 ~--------~~~~~~~~~~~~-~-~~~~~~~~l~---~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~  202 (513)
                      +        +.+.+..++..+ . .+...+.+++   .+..+..++..++.....+....|.| ++.+.+|++..+.+..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~  290 (398)
T TIGR00895       212 NAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATG  290 (398)
T ss_pred             HHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHH
Confidence            0        000000000000 0 0111122222   23445555555666677777888999 5555679999999999


Q ss_pred             hchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-
Q psy13668        203 SGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-  281 (513)
Q Consensus       203 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  281 (513)
                      .....++..+++++.|+++||+++|+.... ..+..+....+.....+.........+...+.+...+.......+..| 
T Consensus       291 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  369 (398)
T TIGR00895       291 GALFNFGGVIGSIIFGWLADRLGPRVTALL-LLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPT  369 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcchHHHHHH-HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH
Confidence            999999999999999999999999844333 333333333332222222222222222222334455556666777765 


Q ss_pred             chhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        282 NYAGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       282 ~~~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      ++||++.|+.+....+++.++|.+.|.+
T Consensus       370 ~~~g~~~g~~~~~~~~g~~~g~~~~G~l  397 (398)
T TIGR00895       370 AIRATGVGWAIGIGRLGAIIGPILAGYL  397 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence            6799999999999999999999999876

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.68  E-value=6.5e-15  Score=154.99  Aligned_cols=57  Identities=18%  Similarity=0.092  Sum_probs=50.1

Q ss_pred             HHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhH
Q psy13668        179 TIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASV  235 (513)
Q Consensus       179 ~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~  235 (513)
                      ....++|.|+++.+|++..+.+.+.+...++..++++..|+++||++||+....+.+
T Consensus       293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~  349 (496)
T PRK03893        293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLL  349 (496)
T ss_pred             hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence            355789999988889999999999999999999999999999999999987665443

>PRK11043 putative transporter; Provisional

Probab=99.68  E-value=3.7e-14  Score=145.04  Aligned_cols=266  Identities=14%  Similarity=0.117  Sum_probs=175.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH------HHH-----HHH-HHH---------------Hh-
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL------AWF-----ALW-MTF---------------AT-   73 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~------~~~-----~~~-~~~---------------~~-   73 (513)
                      .+...+...++..++.++.|+++||+ |.|.++.....+..      .+.     ... .++               .. 
T Consensus        43 ~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~  121 (401)
T PRK11043         43 VSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVID  121 (401)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            57778888999999999999999999 88877664221110      000     000 000               00 


Q ss_pred             ----------------hhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         74 ----------------GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        74 ----------------~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                      ...++..++|.+++.+.+.. |||+.|++.+++.++..+..+++ +++++++          ++
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~  189 (401)
T PRK11043        122 RYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-GWQAIFATLFAITLLLILPTLRL-KPSKKAR----------KQ  189 (401)
T ss_pred             hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHc-CCCCCcc----------cc
Confidence                            00134557778888888887 99999998877777665544433 3322111          10


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      ++          ++.++++++++++++...+...+....++.+..+.|.++++ +|++..+.++......++..+|++..
T Consensus       190 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~  258 (401)
T PRK11043        190 SQ----------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGC  258 (401)
T ss_pred             ch----------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            00          01123677888888876666666667777888899999876 69999999988888888999999999


Q ss_pred             hhhcCCCcccchhhHhhHHHHHHHHH---HHhc-CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHH
Q psy13668        218 TILSGPRLTSPFDFSASVGPGLGILA---ASYS-GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGG  293 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~~~~~~~~---l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~  293 (513)
                      +++.||+++|+.........+++...   .... ..........+.+.....+...+.......+..|+++|++.|+.+.
T Consensus       259 ~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~  338 (401)
T PRK11043        259 RAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNT  338 (401)
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHH
Confidence            99999999888665544444433322   2221 2222222222222233344555555555556668899999999999


Q ss_pred             HHhHHhhHHHHHHHHhcc
Q psy13668        294 IGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       294 ~~~i~~~igp~l~g~l~~  311 (513)
                      .+..++..++.+.|.+.+
T Consensus       339 ~~~~~~~~~~~~~g~l~~  356 (401)
T PRK11043        339 LQLGLCFLASLLVSALIS  356 (401)
T ss_pred             HHHHHHHHHHHHHHHccC
Confidence            999999999999988876

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.68  E-value=3.4e-14  Score=143.90  Aligned_cols=268  Identities=14%  Similarity=0.098  Sum_probs=172.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH----------------HHH----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA----------------LWM----------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~----------------~~~----------------   69 (513)
                      .+...+...++.+++.++.|.+.||+ |.|.++.....+..+...                +..                
T Consensus        28 ~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~  106 (377)
T PRK11102         28 VQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRD  106 (377)
T ss_pred             HHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56777888999999999999999999 877776542211111000                000                


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  +......+|..+++.+++.+.+.. +||+.|++.+.+.++..+...++.+|+++++++.       +.
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~  178 (377)
T PRK11102        107 MFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHAIFWVLALAAILAAALVFFFIPETLPKERRQ-------PF  178 (377)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHHHHHhCCccCcccccC-------CC
Confidence                        000011255677788888888877 9999999888777776655555556543221111       00


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      +.++        ...++++.+++++++...+..++.....+.+..+.|.++.+.+|+++.+.+.+.....++..++++..
T Consensus       179 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~  250 (377)
T PRK11102        179 HLRT--------TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIIN  250 (377)
T ss_pred             ChHH--------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            0000        01123567888888877777777777778888889999999899999999999999999999999999


Q ss_pred             hhhcCCCcccchhhHhhHHHHHHHH---HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHH
Q psy13668        218 TILSGPRLTSPFDFSASVGPGLGIL---AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGI  294 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~  294 (513)
                      |++.||.++|+....+.....+...   .....+...+..........+..+...........+..|+++|.+.++.+..
T Consensus       251 g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  330 (377)
T PRK11102        251 SRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTL  330 (377)
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHHHH
Confidence            9999999999987776654433222   2222222222222222222222333344444556677788999999998776


Q ss_pred             Hh-HHhhHHHHHH
Q psy13668        295 GA-LSGTVSPYLV  306 (513)
Q Consensus       295 ~~-i~~~igp~l~  306 (513)
                      .+ +++.+++.+.
T Consensus       331 ~~~~g~~~g~~~~  343 (377)
T PRK11102        331 RFGIGAIVGALLS  343 (377)
T ss_pred             HHHHHHHHHHHHH
Confidence            54 5555555543

>PRK09952 shikimate transporter; Provisional

Probab=99.67  E-value=4.9e-14  Score=145.76  Aligned_cols=157  Identities=10%  Similarity=-0.002  Sum_probs=107.2

Q ss_pred             hhccchhHHHHHH-HHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668        156 KIATSAPVIGLII-AQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS  234 (513)
Q Consensus       156 ~~l~~~~~~~~~l-~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~  234 (513)
                      .++++++.+.... ..++.....|...+|.|.|+++.+|++................++.++.|+++||++||+....+.
T Consensus       244 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~  323 (438)
T PRK09952        244 ALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGA  323 (438)
T ss_pred             HHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence            3566777666544 455556778888899999999889998876655555667778889999999999999999877766


Q ss_pred             HHHHHHHHHHHh--cCCh-hHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHH-hHHhhHHHHHHHHh
Q psy13668        235 VGPGLGILAASY--SGCN-RLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIG-ALSGTVSPYLVGVL  309 (513)
Q Consensus       235 ~~~~~~~~~l~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~-~i~~~igp~l~g~l  309 (513)
                      ++..++.+.+..  ...+ .........+.....+...+.......|..| +.|+++.|+.+..+ .++++++|.+.+.+
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l  403 (438)
T PRK09952        324 LIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAAL  403 (438)
T ss_pred             HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            555444332222  1222 2222222222233334445556677778776 56899999876655 48999999999998


Q ss_pred             ccc
Q psy13668        310 TPN  312 (513)
Q Consensus       310 ~~~  312 (513)
                      .+.
T Consensus       404 ~~~  406 (438)
T PRK09952        404 VTY  406 (438)
T ss_pred             HHh
Confidence            763

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.67  E-value=1.1e-13  Score=144.20  Aligned_cols=167  Identities=16%  Similarity=0.144  Sum_probs=115.5

Q ss_pred             hhhccc-hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchh---hhhHHhchhHHHHHHHHHhhhhhcCCCcccchh
Q psy13668        155 GKIATS-APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSIT---SVDLISGWPNRSVIVTYKMRTILSGPRLTSPFD  230 (513)
Q Consensus       155 ~~~l~~-~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~---~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~  230 (513)
                      .+++|+ |.+....+..++....+|....+.|......++-+..   +.+....+..++..+|..+.|.+..|.+|-|..
T Consensus       303 ~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~  382 (599)
T PF06609_consen  303 HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQ  382 (599)
T ss_pred             HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHH
Confidence            567887 5677777788888888888888999998888877653   567888888899999999999999888775554


Q ss_pred             -hHhhHHHHHHHHHHHhcC-ChhHHHH-HHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        231 -FSASVGPGLGILAASYSG-CNRLAVT-VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       231 -~~~~~~~~~~~~~l~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                       +.+.+.+.+++.++.... ++....+ ..+..+.+......+.........++++.|+++|+..+++.+|+.+|..+..
T Consensus       383 li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~  462 (599)
T PF06609_consen  383 LIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN  462 (599)
T ss_pred             HHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence             455555555544444332 2222222 2233333333333333332323333577999999999999999999999999


Q ss_pred             HhccchhhhHHHhh
Q psy13668        308 VLTPNWLAKQICNS  321 (513)
Q Consensus       308 ~l~~~~~~~~l~~~  321 (513)
                      .++.+...+++.++
T Consensus       463 ~I~~n~~~~~l~~~  476 (599)
T PF06609_consen  463 AIFTNKLPKELPKY  476 (599)
T ss_pred             HHHHhhhhHhHHHH
Confidence            88887777776654

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.67  E-value=4.6e-14  Score=143.96  Aligned_cols=269  Identities=16%  Similarity=0.165  Sum_probs=172.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-----------HHH---------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-----------LWM---------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-----------~~~---------------------   69 (513)
                      .+...+...++..++.++.|.++||+ |.|.++.+...+..+...           ...                     
T Consensus        45 ~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~  123 (394)
T PRK11652         45 VQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRD  123 (394)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            56777889999999999999999999 888876542211111000           000                     


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  ....+..++..++|.+++.+.+.. |||+.|++.++..++..+...++.||++++++..       . 
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-  194 (394)
T PRK11652        124 LYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF-GWRACYLFLLLLGAGVTFSMARWMPETRPADARR-------T-  194 (394)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHHHHHHHHHHhCCccCccccch-------h-
Confidence                        000011234456777777777777 9999999887777666555555556543221111       0 


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                       +          .+.++++.+++++++...+..+........+..+.|.++++.+|++..+.+++.....++.+++..+.
T Consensus       195 -~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~  263 (394)
T PRK11652        195 -R----------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFA  263 (394)
T ss_pred             -H----------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence             0          01123567888888776666666555666667788899999899999999998888888899999999


Q ss_pred             hhhcCCCcccchhhHhh-HHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHH
Q psy13668        218 TILSGPRLTSPFDFSAS-VGPGLGILAASYSG-CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIG  295 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~-~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~  295 (513)
                      +++.||.+++....... ....+......... .+.+.......+.....+...+.......+..|+++|++.++.+...
T Consensus       264 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  343 (394)
T PRK11652        264 GRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQ  343 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Confidence            99999987433222111 12222222222211 22222222222222334455666677777778889999999999999


Q ss_pred             hHHhhHHHHHHHHhcc
Q psy13668        296 ALSGTVSPYLVGVLTP  311 (513)
Q Consensus       296 ~i~~~igp~l~g~l~~  311 (513)
                      .+++.+++.+.+.+.+
T Consensus       344 ~lg~~~~~~~~~~~~~  359 (394)
T PRK11652        344 NIGSGLAALLSAMLPQ  359 (394)
T ss_pred             HHHHHHHHHHHHHccC
Confidence            9999999998877654

>PRK10504 putative transporter; Provisional

Probab=99.67  E-value=3.3e-14  Score=148.60  Aligned_cols=277  Identities=16%  Similarity=0.139  Sum_probs=176.5

Q ss_pred             chhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhh--------
Q psy13668          7 NNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQ--------   76 (513)
Q Consensus         7 ~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~--------   76 (513)
                      ...++.+++|  +|++..++...+..+|..++++++|.+.|.. |||+.|++..++..+............+        
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~-gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~  197 (471)
T PRK10504        119 GRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA-SWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDL  197 (471)
T ss_pred             HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCh
Confidence            3456778885  4567788888899999999999999999998 9999999877655544433333222211        


Q ss_pred             hHHH--HHHHHH---HHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCC
Q psy13668         77 IGNV--VSMAVS---GLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPP  151 (513)
Q Consensus        77 ~g~~--~~~~~~---~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (513)
                      .+..  ......   +.-.....+|.... +.............+..+++..+++..                       
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------  253 (471)
T PRK10504        198 SGFLLLAVGMATLTLALDGSKGLGLSPLA-IAGLVAVGVVALLLYLLHARNNNRALF-----------------------  253 (471)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcCCcchHH-HHHHHHHHHHHHHHHHHHHhcCCCCcc-----------------------
Confidence            1110  000000   00011111453222 222222222222222222211111111                       


Q ss_pred             CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhh
Q psy13668        152 TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDF  231 (513)
Q Consensus       152 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~  231 (513)
                       + .++++|+++.......++..........+.|.|++..+|.++.+.++...+..++..++.++.+++.||+++|+...
T Consensus       254 -~-~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~  331 (471)
T PRK10504        254 -S-LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLV  331 (471)
T ss_pred             -C-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH
Confidence             1 35788999988888888777777677778999999888999999999999989999999999999999999999988


Q ss_pred             HhhHHHHHHHHHHHhcCC-hhHHHH--HHHHHHHHHHhhhhhhHHHhhc-ccCcchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        232 SASVGPGLGILAASYSGC-NRLAVT--VSFTLGMGTMGAFLPSLKVNAL-DLSPNYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       232 ~~~~~~~~~~~~l~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      .+..+.++...++...+. ......  ..+..+. ..+...+....... ..+++++|.+.|+.++...++..+|+.+.|
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g  410 (471)
T PRK10504        332 ATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGM-VNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAG  410 (471)
T ss_pred             HHHHHHHHHHHHHHhccccccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence            887777766555554432 222211  1222222 23333333334443 444677999999999999999999999998


Q ss_pred             Hhcc
Q psy13668        308 VLTP  311 (513)
Q Consensus       308 ~l~~  311 (513)
                      .+++
T Consensus       411 ~ll~  414 (471)
T PRK10504        411 LLLG  414 (471)
T ss_pred             HHHH
Confidence            8876

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.66  E-value=1.7e-14  Score=148.43  Aligned_cols=277  Identities=10%  Similarity=0.053  Sum_probs=173.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHH-HHHHH----H----------HHHHHHH--------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGA-VGLAW----F----------ALWMTFA--------------   72 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~-~~~~~----~----------~~~~~~~--------------   72 (513)
                      .|+..+...++..+++++.|+++||+ |.|.++..... ..+..    .          ..+....              
T Consensus        48 ~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (420)
T PRK09528         48 TGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAG  126 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchh
Confidence            78889999999999999999999999 88877653211 11000    0          0000000              


Q ss_pred             ----------h-----------hhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668         73 ----------T-----------GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY  131 (513)
Q Consensus        73 ----------~-----------~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  131 (513)
                                .           ...+|..+++++++.+.+ . +|+.+|++.++++++..++.++..++++++.. .   
T Consensus       127 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~---  200 (420)
T PRK09528        127 AIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-I-NPQINFWLGSGSALILLVLLFFAKPDAPSTAK-V---  200 (420)
T ss_pred             hhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-c-CchHhHHHHHHHHHHHHHHHhcccccccchhh-h---
Confidence                      0           012467788888887765 4 89999998777776665555444443322211 0   


Q ss_pred             cccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc---CcchhhhhHHhchhHH
Q psy13668        132 GTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL---HFSITSVDLISGWPNR  208 (513)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~---g~s~~~~~~~~~~~~~  208 (513)
                          .+++.+   +..+.+....++.+|+++++...+..++....+.....+.|.|+.+.+   +.+..+.+.+.+...+
T Consensus       201 ----~~~~~~---~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  273 (420)
T PRK09528        201 ----ANALGA---NASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVF  273 (420)
T ss_pred             ----ccchhc---ccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Confidence                000000   000011122356788888876666555555555556667888887654   4566677888888888


Q ss_pred             HHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHH
Q psy13668        209 SVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTL  287 (513)
Q Consensus       209 ~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~  287 (513)
                      ...++.+..|++.||+++|+....+.++..+...++.+.++...........+. ..+...........+.. ++.+++.
T Consensus       274 ~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~a~~  352 (420)
T PRK09528        274 LEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAF-EVPFLLVGVFKYITLNFDVRLSATI  352 (420)
T ss_pred             HHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCccceeee
Confidence            999999999999999999999888777777776666655443322222222222 22222233334444444 5667777


Q ss_pred             HHH-HHHHHhHHhhHHHHHHHHhccch
Q psy13668        288 MAL-VGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       288 ~gi-~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      .++ .+....+|.+++|.+.|.+.|..
T Consensus       353 ~~~~~~~~~~lg~~ig~~~~G~l~~~~  379 (420)
T PRK09528        353 YLVGFQFAKQLGAVFLSTLAGNLYDSI  379 (420)
T ss_pred             eeehHHHHHHHHHHHHHHHHHHHHHhh
Confidence            665 67788999999999999988743

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.66  E-value=9.9e-14  Score=140.93  Aligned_cols=273  Identities=9%  Similarity=0.058  Sum_probs=178.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhccCch----HHHHHHHHH-HHHHHH----HHHHHH------------------
Q psy13668         20 SNTVILMAGAQIGNVVSMAVSGLLIRYLGGWT----SVFYVFGAV-GLAWFA----LWMTFA------------------   72 (513)
Q Consensus        20 ~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr----~if~~~g~~-~~~~~~----~~~~~~------------------   72 (513)
                      ...|+..+...++..++.++.|.+.||. |.+    ....+...+ ......    .|.+..                  
T Consensus        39 ~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a  117 (382)
T PRK11128         39 ETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFAVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDA  117 (382)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHcccccHHHH
Confidence            3377888889999999999999999999 752    222111111 100000    011000                  


Q ss_pred             -----------------hhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccc
Q psy13668         73 -----------------TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAV  135 (513)
Q Consensus        73 -----------------~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  135 (513)
                                       ....+|..++|++++.+.+++ |||..|++.++..++.. +..+..||.   .|..       
T Consensus       118 ~~~~~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-g~~~~f~~~~~~~~~~~-~~~~~~~~~---~~~~-------  185 (382)
T PRK11128        118 LANTWQKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-GEQAILWILTAGVASML-LGQLLRPTI---MPQG-------  185 (382)
T ss_pred             HHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-ChhHHHHHHHHHHHHHH-HHHHccCCC---CCcc-------
Confidence                             001367889999999999988 99999987665444333 222233322   1111       


Q ss_pred             cccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHH
Q psy13668        136 MHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYK  215 (513)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~  215 (513)
                      ++ ++     +.++...++++++|+++++...+..++.........++.|.|++| .|++..+.+.+.....+...+..+
T Consensus       186 ~~-~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~  258 (382)
T PRK11128        186 ES-RQ-----QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFA  258 (382)
T ss_pred             cc-cc-----ccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHH
Confidence            10 00     000112346789999999988887777777777788888999976 799999999998888889999999


Q ss_pred             hhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHH-H
Q psy13668        216 MRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGG-I  294 (513)
Q Consensus       216 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~-~  294 (513)
                      ..|++.||+++|+....+.+..+++.+.+...++........+..+.+ .+...+.......+..++++++..+..+. .
T Consensus       259 ~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (382)
T PRK11128        259 FSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGT-FTVCHLAAMRYIAARPGSEVIRLQALYSALA  337 (382)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCHhhhHHHHHHHHHHH
Confidence            999999999999998888877777766665544333222222222222 33334444455555566778888888774 4


Q ss_pred             HhHHhhHHHHHHHHhccch
Q psy13668        295 GALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       295 ~~i~~~igp~l~g~l~~~~  313 (513)
                      ..++..++|.+.|.+.|..
T Consensus       338 ~~~g~~ig~~i~G~l~~~~  356 (382)
T PRK11128        338 MGGSIAIMTVLSGFLYQHL  356 (382)
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            4667789999999888754

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.65  E-value=1.3e-13  Score=140.52  Aligned_cols=208  Identities=13%  Similarity=0.081  Sum_probs=141.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-------HH-------------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-------WM-------------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-------~~-------------------------   69 (513)
                      .+...+...++..++.++.|++.||+ |+|..+.....+..+....       +.                         
T Consensus        40 ~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~  118 (392)
T PRK10473         40 LHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRD  118 (392)
T ss_pred             HHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            56777888899999999999999999 8888766432111110000       00                         


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  .......++..++|.+++.+.+.. +||+.|++.+.+.++..++..+..+|++++++..       ++
T Consensus       119 ~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~  190 (392)
T PRK10473        119 TLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-PWQSLFYTMAAMGILVLLLSLFILKETRPARAPA-------AS  190 (392)
T ss_pred             HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCC-------cc
Confidence                        000000244566777777777777 9999999988877776666555666543221100       00


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      +.           ....++.+++++++...+...+.......+..+.|.++++.+|++..+.+.+.....+..+++++..
T Consensus       191 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  259 (392)
T PRK10473        191 SK-----------PRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFST  259 (392)
T ss_pred             ch-----------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            00           0112466788887766665555555556667788889988899999999999999999999999999


Q ss_pred             hhhcCCCcccchhhHhhHHHHHHHHHHHhcCC
Q psy13668        218 TILSGPRLTSPFDFSASVGPGLGILAASYSGC  249 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~  249 (513)
                      +++.||+++|+....+.....++...+.....
T Consensus       260 ~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~  291 (392)
T PRK10473        260 PFALGIFKPRTLMLTSQVLFLAAGITLALSPS  291 (392)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999888877776666665555433

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.64  E-value=6.8e-14  Score=150.90  Aligned_cols=108  Identities=12%  Similarity=0.113  Sum_probs=82.9

Q ss_pred             hchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-
Q psy13668        203 SGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-  281 (513)
Q Consensus       203 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  281 (513)
                      .....++.++|.++.|+++||+|||+++..+.++.+++++++.+..+........++.+ ++.+...+.......++.| 
T Consensus       601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g-~~~~~~~~~~~a~~aEl~Pt  679 (742)
T TIGR01299       601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFG-GLSIAAWNALDVLTVELYPS  679 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCH
Confidence            44556788999999999999999999999998888888887776655443333333222 2333445566677788876 


Q ss_pred             chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        282 NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       282 ~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      +.||+++|+.+..+.+|++++|.+.+.+.+
T Consensus       680 ~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~  709 (742)
T TIGR01299       680 DKRATAFGFLNALCKAAAVLGILIFGSFVG  709 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            569999999999999999999999987765

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK10133 L-fucose transporter; Provisional

Probab=99.64  E-value=9.2e-14  Score=143.50  Aligned_cols=156  Identities=10%  Similarity=-0.007  Sum_probs=123.2

Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHH-HHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH
Q psy13668        154 WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYM-KDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS  232 (513)
Q Consensus       154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l-~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~  232 (513)
                      .++++++|.++...+..++.....++...|.|.|+ ++.+|+++.+.+.......++..+|++.++++.||+++|++...
T Consensus       251 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~  330 (438)
T PRK10133        251 LSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAA  330 (438)
T ss_pred             HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence            36788999988877777777788888888999995 66789999999999999999999999999999999999998887


Q ss_pred             hhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        233 ASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       233 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      +.++.++++......+..  .....+.+...+.+..+|.......+..|++.+.+.++.. ...+++.++|.+.|.+.|.
T Consensus       331 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~  407 (438)
T PRK10133        331 YALIAMALCLISAFAGGH--VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDA  407 (438)
T ss_pred             HHHHHHHHHHHHHHcCCh--HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHHHHHHHHh
Confidence            776666555554444332  2233344445567778888888888888888888888886 4567889999999888764

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.64  E-value=7.6e-14  Score=143.53  Aligned_cols=271  Identities=14%  Similarity=0.059  Sum_probs=172.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHH------HHHHHH----------HHHHHH----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVF------GAVGLA----------WFALWM----------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~------g~~~~~----------~~~~~~----------------   69 (513)
                      .++..+...++..++.++.|.+.||+ |.|.+....      +.+...          +.....                
T Consensus        54 ~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~  132 (417)
T PRK10489         54 VGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALL  132 (417)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence            68888899999999999999999999 877654321      000000          000000                


Q ss_pred             -----------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccc
Q psy13668         70 -----------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG  132 (513)
Q Consensus        70 -----------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  132 (513)
                                       +......+|..+++.+++.+.+.. +||+.|.+.++..++..+.. +..|+.+++++.     
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~-----  205 (417)
T PRK10489        133 AATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-GVAWNYGLAAAGTFITLLPL-LRLPALPPPPQP-----  205 (417)
T ss_pred             hhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHH-HhCCCCCCCCcc-----
Confidence                             000011256677888888888777 99999987666555444333 344443221110     


Q ss_pred             ccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHH
Q psy13668        133 TAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIV  212 (513)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~i  212 (513)
                         ++++.+.       ...+++.+++++.++...+..++. ....+...+.|.|+++.+|++..+.+.+.....++.++
T Consensus       206 ---~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~i  274 (417)
T PRK10489        206 ---REHPLRS-------LLAGFRFLLASPVVGGIALLGGLL-TMASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAAL  274 (417)
T ss_pred             ---cccchHH-------HHHHHHHHHcChHHHHHHHHHHHH-HHHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHH
Confidence               0000000       001234567777766555544433 23456778999999998899999999999999999999


Q ss_pred             HHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHH
Q psy13668        213 TYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALV  291 (513)
Q Consensus       213 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~  291 (513)
                      +.++.+++.||.++++....+..+..++.+.+...++........+..+. ..+...+.......+..| +.||+++|+.
T Consensus       275 g~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~  353 (417)
T PRK10489        275 GALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGY-LSAISSLLQYTLLQTQTPDEMLGRINGLW  353 (417)
T ss_pred             HHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence            99999999999777777666666666665555443322222222222222 223333444566667666 5699999999


Q ss_pred             HHHHhHHhhHHHHHHHHhccc
Q psy13668        292 GGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       292 ~~~~~i~~~igp~l~g~l~~~  312 (513)
                      +...++++.++|.+.|.+.+.
T Consensus       354 ~~~~~~g~~~g~~l~G~l~~~  374 (417)
T PRK10489        354 TAQNVTGDAIGAALLGGLGAM  374 (417)
T ss_pred             HHHHhhhHhHHHHHHHHHHHH
Confidence            999999999999999988863

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.64  E-value=4.2e-13  Score=137.70  Aligned_cols=272  Identities=12%  Similarity=0.028  Sum_probs=166.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHH------H-----H-----H------------HH----
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAW------F-----A-----L------------WM----   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~------~-----~-----~------------~~----   69 (513)
                      .+...+.+.+|.+++.++.|+++||+ |+|.++.....+..+.      .     +     +            ..    
T Consensus        53 ~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~  131 (413)
T PRK15403         53 APASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQE  131 (413)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45566777899999999999999999 9888776422111000      0     0     0            00    


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  .......++..++|.+++.+.+.. |||+.|++.+++.++..+..++..||.+++++.        +.
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~--------~~  202 (413)
T PRK15403        132 AFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAV--------PF  202 (413)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhCCCCccccCC--------CC
Confidence                        000011246777888888888777 999999998887776655444455654321110        00


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      +.++.        ..+++++++|++++...+..++.....+.+..+.|.++++.+|++..+.++...+...+..+++.+.
T Consensus       203 ~~~~~--------~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~  274 (413)
T PRK15403        203 SAKSV--------LRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIV  274 (413)
T ss_pred             ChHHH--------HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            00000        1134678899999998888888888888888999999999999999999999888888888888887


Q ss_pred             hhhcCCCcccchhhHhhHHHHHHHHHHH----hcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHH
Q psy13668        218 TILSGPRLTSPFDFSASVGPGLGILAAS----YSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGG  293 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~  293 (513)
                      +++.+|..+++..........++..++.    ...+..........+.....+...+........-.+..+|++.|+.+.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~  354 (413)
T PRK15403        275 ARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNM  354 (413)
T ss_pred             HHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHH
Confidence            7765444333332222221122221111    112222111222222222233333444332222223348999999999


Q ss_pred             HHhHHhhHHHHHHHHhcc
Q psy13668        294 IGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       294 ~~~i~~~igp~l~g~l~~  311 (513)
                      ........++.+.+++.+
T Consensus       355 ~~~~~~~~~~~~~g~~~~  372 (413)
T PRK15403        355 VILMVMAVSVEIGRWLWF  372 (413)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999998888888877654

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.63  E-value=5.3e-14  Score=162.73  Aligned_cols=276  Identities=13%  Similarity=0.044  Sum_probs=180.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHH---HHHHHHH------H-HHHHH--------------------
Q psy13668         20 SNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYV---FGAVGLA------W-FALWM--------------------   69 (513)
Q Consensus        20 ~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~---~g~~~~~------~-~~~~~--------------------   69 (513)
                      ...++..+.+.++.++..+++|+++||+ |.|.+...   ...+.+.      . ...+.                    
T Consensus        52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~  130 (1140)
T PRK06814         52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKY  130 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHH
Confidence            3467788889999999999999999999 98876421   1110000      0 00000                    


Q ss_pred             -----------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccc
Q psy13668         70 -----------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG  132 (513)
Q Consensus        70 -----------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  132 (513)
                                       +......+|.+++|++++++.... +|++.|....++.++.. +..+.+++.+.+.+..    
T Consensus       131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----  204 (1140)
T PRK06814        131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG-NFVILVALLMGIAVLGW-LASLFIPKTGNAAPDL----  204 (1140)
T ss_pred             HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHH-HHHhhCCCCCCCCCCC----
Confidence                             111112477889999999999887 99999844444444333 3333444433221111    


Q ss_pred             ccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHH
Q psy13668        133 TAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIV  212 (513)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~i  212 (513)
                         +.+. ....+    ....++.+.+++.++...+..++.......+.+++|.|+++.+|.+..+.+++.+...++.++
T Consensus       205 ---~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~i  276 (1140)
T PRK06814        205 ---KIDR-NIIRS----TITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAV  276 (1140)
T ss_pred             ---eecc-chHHH----HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence               1000 00000    011346677889999988888888888888889999999999999999999999999999999


Q ss_pred             HHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc-------------------CChhHHH-HHHHHHHHHHHhhhhhhH
Q psy13668        213 TYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS-------------------GCNRLAV-TVSFTLGMGTMGAFLPSL  272 (513)
Q Consensus       213 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~~~-~~~~~~~~~~~~~~~~~~  272 (513)
                      |.+..|+++||..+++....+.++.+++.+.+...                   ..+.+.. +..+.+++ +.+...+..
T Consensus       277 g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~  355 (1140)
T PRK06814        277 GSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAA-AGGLYIVPL  355 (1140)
T ss_pred             HHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHH-HHHHhHHHH
Confidence            99999999998877665555554444443333221                   0222222 22233333 334444445


Q ss_pred             HHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        273 KVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       273 ~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .+..++.. ++++|++.|+.++..+++..+++.+.|.+.+
T Consensus       356 ~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~  395 (1140)
T PRK06814        356 FAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA  395 (1140)
T ss_pred             HHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55655555 5679999999999999999999999988864

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.63  E-value=1.5e-13  Score=140.23  Aligned_cols=192  Identities=8%  Similarity=-0.087  Sum_probs=130.4

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668         95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD  174 (513)
Q Consensus        95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~  174 (513)
                      +||.++++..++.++..++.+++.++.|+++...                       ....+.+|+++.|..++.+++.+
T Consensus       209 ~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~~~-----------------------~~~~~vlk~~~~Wllslly~~tF  265 (462)
T PRK15034        209 SLANAAWIWVPLLAIATIAAWSGMNDIASSRASI-----------------------ADQLPVLQRLHLWLLSLLYLATF  265 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCH-----------------------HHHHHHhCCCchhHHHHHHHHHH
Confidence            4788777777777666656565555433221111                       01267899999999999999999


Q ss_pred             HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHH-hcCC----
Q psy13668        175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAAS-YSGC----  249 (513)
Q Consensus       175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~-~~~~----  249 (513)
                      ..+.++..++|.|+++.+  +............+...+.++++|+++||+|++++...+.+...++...+. ..+.    
T Consensus       266 G~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~  343 (462)
T PRK15034        266 GSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSG  343 (462)
T ss_pred             HHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            999999999999998855  333333334445678889999999999999999998888876666653322 2221    


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc----------------------hhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        250 NRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN----------------------YAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----------------------~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      +.......+...+...+...........+++|+                      +.|.+.|+....+.+|+.+.|.+.|
T Consensus       344 ~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g  423 (462)
T PRK15034        344 NFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFG  423 (462)
T ss_pred             HHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHH
Confidence            122222223222334444554555444444442                      6899999999999999999999988


Q ss_pred             Hhcc
Q psy13668        308 VLTP  311 (513)
Q Consensus       308 ~l~~  311 (513)
                      ...+
T Consensus       424 ~~~~  427 (462)
T PRK15034        424 MSLN  427 (462)
T ss_pred             HHHH
Confidence            7765

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.62  E-value=2.6e-13  Score=139.00  Aligned_cols=270  Identities=14%  Similarity=0.136  Sum_probs=167.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-------HH---------H----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-------LW---------M----------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-------~~---------~----------------   69 (513)
                      .+...+...++..++.++.|++.||+ |.|.++.....+..+...       .+         .                
T Consensus        56 ~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  134 (408)
T PRK09874         56 SGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQ  134 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHh
Confidence            46778888899999999999999999 887776642211110000       00         0                


Q ss_pred             -----------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccccc
Q psy13668         70 -----------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHK  138 (513)
Q Consensus        70 -----------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  138 (513)
                                 .......+|..+++.+++.+.+.. +||+.|.+.+++.++..+...++.++++++.++.       +  
T Consensus       135 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--  204 (408)
T PRK09874        135 VPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY-GLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK-------E--  204 (408)
T ss_pred             cCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHhccCcccccch-------h--
Confidence                       000001245677788888887777 9999999888877766665555666543211110       0  


Q ss_pred             chhhhhccCCCCCCchhhhccchhHHHHHH-HHHHHHHHHHHHHhhHHHHHHHhcCcchh---hhhHHhchhHHHHHHHH
Q psy13668        139 SNRFIFSFQNLPPTPWGKIATSAPVIGLII-AQIGHDFGLFTIVTDLPKYMKDVLHFSIT---SVDLISGWPNRSVIVTY  214 (513)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l-~~~~~~~~~~~~~~~lp~~l~~~~g~s~~---~~~~~~~~~~~~~~ig~  214 (513)
                      +.+. +        +..+.+++++++.... ..+...........+.|.|..+..+....   ..+.+.....++..++.
T Consensus       205 ~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~  275 (408)
T PRK09874        205 MLHM-R--------EVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSA  275 (408)
T ss_pred             hhHH-H--------HHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence            0000 0        1134566666654332 23333344445567788888876443222   24555666778888999


Q ss_pred             HhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHH
Q psy13668        215 KMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGG  293 (513)
Q Consensus       215 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~  293 (513)
                      +..|+++||++||+....+.....++.+.+...++.....+..+..+. +.+...+.......+.. ++++|...++.+.
T Consensus       276 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  354 (408)
T PRK09874        276 PRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGA-ADGALLPAVQTLLVYNSSNQIAGRIFSYNQS  354 (408)
T ss_pred             HHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh-hhHhhHHHHHHHHHHhCCcccceeeehHHHH
Confidence            999999999999998887777666665555444433222222222222 33344455555555555 5679999999999


Q ss_pred             HHhHHhhHHHHHHHHhccc
Q psy13668        294 IGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       294 ~~~i~~~igp~l~g~l~~~  312 (513)
                      ...++..++|.+.|.+.+.
T Consensus       355 ~~~~g~~~gp~~~G~l~~~  373 (408)
T PRK09874        355 FRDIGNVTGPLMGAAISAN  373 (408)
T ss_pred             HHHHHHHhhHHHHHHHHhh
Confidence            9999999999999988764

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.62  E-value=1.8e-13  Score=139.71  Aligned_cols=277  Identities=10%  Similarity=0.055  Sum_probs=173.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHH-HHH--HHH-H----------H-HHHHHHH--------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVF-GAV--GLA-W----------F-ALWMTFA--------------   72 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~-g~~--~~~-~----------~-~~~~~~~--------------   72 (513)
                      .++..+...++..++.++.|+++||+ |.|..+... ...  +.. .          . ..+....              
T Consensus        40 ~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  118 (396)
T TIGR00882        40 TGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAG  118 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchh
Confidence            67888999999999999999999999 877776431 110  000 0          0 0000000              


Q ss_pred             ------hh---------------hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668         73 ------TG---------------AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY  131 (513)
Q Consensus        73 ------~~---------------~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  131 (513)
                            .+               ..+|.++++.+++.+. .. +||.+|++.+.+.++..++.+...+++|++++..   
T Consensus       119 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~-~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  193 (396)
T TIGR00882       119 AIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILF-SI-DPQIVFWLGSGFALILMLLLMFAKPKAPSSATVA---  193 (396)
T ss_pred             hHHHHHHHhhhhcccccchhhhhcccHHHHHHHHHhhhh-cc-CchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh---
Confidence                  00               0256677788877664 45 9999999888877776655554444433221100   


Q ss_pred             cccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc---CcchhhhhHHhchhHH
Q psy13668        132 GTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL---HFSITSVDLISGWPNR  208 (513)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~---g~s~~~~~~~~~~~~~  208 (513)
                          +..+    .+.++.+..+.++++|+++++...+..++....+.....+.|.|+++.+   +.+....+.+.+...+
T Consensus       194 ----~~~~----~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i  265 (396)
T TIGR00882       194 ----NALG----ANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGEL  265 (396)
T ss_pred             ----cccc----cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHH
Confidence                0000    0011111234577889999887777666666666667778899988875   4555667888888888


Q ss_pred             HHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHH
Q psy13668        209 SVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTL  287 (513)
Q Consensus       209 ~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~  287 (513)
                      ...++.+..+++.||+++|+....+..+.++........++........+..+.+ .............+.. ++.+++.
T Consensus       266 ~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~at~  344 (396)
T TIGR00882       266 LNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFE-VPFLLVGCFKYITSQFDVRLSATI  344 (396)
T ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCcceEEEe
Confidence            8899999999999999999998887777776665555444333332222222221 2222222233334433 4456666


Q ss_pred             HHH-HHHHHhHHhhHHHHHHHHhccch
Q psy13668        288 MAL-VGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       288 ~gi-~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      .+. .+....+++.++|.+.|.+.|..
T Consensus       345 ~~~~~~~~~~lg~~~~~~l~G~l~~~~  371 (396)
T TIGR00882       345 YLIGFQFAKQLAMIFLSTLAGNMYDSI  371 (396)
T ss_pred             ehHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence            655 56789999999999999998743

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.62  E-value=8.6e-14  Score=141.24  Aligned_cols=161  Identities=18%  Similarity=0.069  Sum_probs=112.8

Q ss_pred             chhhhccchh--HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchh
Q psy13668        153 PWGKIATSAP--VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFD  230 (513)
Q Consensus       153 ~~~~~l~~~~--~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~  230 (513)
                      +.++.+++++  ++......++.....+....++|.|+++.+|.+..+.+.......+...+++++.|+++||++||+..
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~  288 (394)
T TIGR00883       209 PIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVL  288 (394)
T ss_pred             CHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence            3456666655  77777777777778888889999999888999999999999999999999999999999999999876


Q ss_pred             hHhhHHHHHHH-HHH-HhcC-ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHH-HHHhHHhhHHHHH
Q psy13668        231 FSASVGPGLGI-LAA-SYSG-CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVG-GIGALSGTVSPYL  305 (513)
Q Consensus       231 ~~~~~~~~~~~-~~l-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~-~~~~i~~~igp~l  305 (513)
                      .....+..+.. ..+ .... .+.........+.....+...+.......|..| ++|+++.++.+ ....+++.++|.+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~  368 (394)
T TIGR00883       289 IIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYI  368 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHH
Confidence            65444333222 222 2222 222222222222233344455556677777776 56999999854 4556788899999


Q ss_pred             HHHhccch
Q psy13668        306 VGVLTPNW  313 (513)
Q Consensus       306 ~g~l~~~~  313 (513)
                      .|.+.+..
T Consensus       369 ~g~l~~~~  376 (394)
T TIGR00883       369 AAALVAMT  376 (394)
T ss_pred             HHHHHHHc
Confidence            99888743

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>TIGR01272 gluP glucose/galactose transporter

Probab=99.62  E-value=7.4e-14  Score=137.24  Aligned_cols=258  Identities=10%  Similarity=-0.009  Sum_probs=174.3

Q ss_pred             eechhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q psy13668          5 VINNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVS   82 (513)
Q Consensus         5 ~~~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~   82 (513)
                      ...|..+++..+  ++.+.+++..+.+.+|..++|.+++.+..+. .-. ..                    ...+.   
T Consensus        29 ~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~-~~~-~~--------------------~~~~~---   83 (310)
T TIGR01272        29 VAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSG-AGD-LS--------------------MQVAT---   83 (310)
T ss_pred             hhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC-Ccc-hh--------------------hhhhh---
Confidence            345677777763  4556689999999999999999999887542 100 00                    00000   


Q ss_pred             HHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchh
Q psy13668         83 MAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAP  162 (513)
Q Consensus        83 ~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  162 (513)
                           .-.+.. .||++|++.+.+..+..+.+.+.  +.|+.++..       ++++.+    +   +....++.++++.
T Consensus        84 -----~~~~~~-~~~~~yl~ia~~~~~~~i~~~~~--~~p~~~~~~-------~~~~~~----~---~~~~~~~~~~~~~  141 (310)
T TIGR01272        84 -----ANAEAA-KVHTPYLLLAGALAVLAIIFAFL--PLPELQEAD-------VARVSS----G---DTTQKTSAFQFTH  141 (310)
T ss_pred             -----hhHHHH-HHHHHHHHHHHHHHHHHHHHHHc--cCCCCCccc-------cccccc----c---cccchhhHHhhHH
Confidence                 001112 79999987776665555433322  222221111       100000    0   0001145677888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHh--cCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDV--LHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG  240 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~  240 (513)
                      ++...+..+++.....+...|.+.|+.|.  +|+++.+.+...+....+..+|+++.+++.||+++|+....+..+..++
T Consensus       142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~  221 (310)
T TIGR01272       142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL  221 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            88888888888888999999999999865  6899999999999999999999999999999999988887777766666


Q ss_pred             HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .++....+...  ....+.+...+.+..+|.......+..|++.+++.++. ..+.+|+++.|.+.|.+.|.
T Consensus       222 ~~l~~~~~~~~--~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~  290 (310)
T TIGR01272       222 SIGAALTHGYV--AMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADC  290 (310)
T ss_pred             HHHHHHcCCHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHh
Confidence            65554443322  12222233355667777777777777777788888875 67889999999999988874

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.61  E-value=4.8e-14  Score=145.86  Aligned_cols=201  Identities=13%  Similarity=0.047  Sum_probs=136.4

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668         95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD  174 (513)
Q Consensus        95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~  174 (513)
                      +||+.+.+.++++++..++..+..+|++++.+..       ++++        ......+++++++|+++...+..++..
T Consensus       171 g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~-------~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~~  235 (437)
T TIGR00792       171 GWFMFALVLALIGVVSLIICFFGTKERYSEIPKN-------IEKK--------LSLKQIFKALFKNDQLLILCLAYLFYN  235 (437)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc-------cccC--------CCHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            8999999988888877766665666654221110       0000        000123467788999998888888777


Q ss_pred             HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHH
Q psy13668        175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAV  254 (513)
Q Consensus       175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  254 (513)
                      ...+....+.+.|.++.++ +..+.+.+.....++.+++.++.++++||+++|+....+.++.+++.+.+...+.+....
T Consensus       236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (437)
T TIGR00792       236 LAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLI  314 (437)
T ss_pred             HHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHH
Confidence            7777766666666666555 455666677777899999999999999999999998888777777666655544333333


Q ss_pred             HHHHHHHHHHHhhhhhhHHHhhcccC--------cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        255 TVSFTLGMGTMGAFLPSLKVNALDLS--------PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .....+.....+...+...+...|..        ++.+|...|+.++...+++.+++.+.|.+.+
T Consensus       315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~  379 (437)
T TIGR00792       315 LVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG  379 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33323322333344444445544442        3558999999999999999999999988875

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.61  E-value=1.3e-13  Score=145.25  Aligned_cols=286  Identities=11%  Similarity=0.074  Sum_probs=160.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH-----------------HHHHHHHhh----------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF-----------------ALWMTFATG----------   74 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~-----------------~~~~~~~~~----------   74 (513)
                      .+...+...+|.+++.++.|++.|++ |+|.++.....+..+..                 +....+..+          
T Consensus        58 ~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~  136 (502)
T TIGR00887        58 SAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLS  136 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHH
Confidence            56788889999999999999999999 99988754221111100                 000000000          


Q ss_pred             -----------------------hhhHHHHHHHHHHHHHh-----------------------ccCCchHHHHHHHHHHH
Q psy13668         75 -----------------------AQIGNVVSMAVSGLLIR-----------------------YLGGWTSVFYVFGAVGL  108 (513)
Q Consensus        75 -----------------------~~~g~~~~~~~~~~l~~-----------------------~~~gWr~~f~i~~~~~~  108 (513)
                                             ..+|..+++.+...+..                       .+ +||++|.+.+++++
T Consensus       137 ~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~WR~~~~~~~ip~~  215 (502)
T TIGR00887       137 AIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDY-MWRILIGFGAVPAL  215 (502)
T ss_pred             HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcc-cHHHHHHHHHHHHH
Confidence                                   01344445554443321                       23 79999977666665


Q ss_pred             HHHHHHHHhccCCCCCc---cchhc--------ccccccccchhhhh---ccCCCCCCchhhhccc---hhH----HHHH
Q psy13668        109 AWFALWMTFASSDPSES---THYVA--------YGTAVMHKSNRFIF---SFQNLPPTPWGKIATS---APV----IGLI  167 (513)
Q Consensus       109 ~~~~~~~~~~~~~p~~~---~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~---~~~----~~~~  167 (513)
                      +.. ++.+++||+|...   .+.++        ..+...+++.+..+   +.++..+.++++++++   ++.    +...
T Consensus       216 i~~-~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  294 (502)
T TIGR00887       216 LAL-YFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTA  294 (502)
T ss_pred             HHH-HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHH
Confidence            443 4455678877521   11000        00000000000000   0000111245666642   222    2222


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhH------------HhchhHHHHHHHHHhhhhhcCCCcccchhhHhhH
Q psy13668        168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDL------------ISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASV  235 (513)
Q Consensus       168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~  235 (513)
                      ...++....+|+...|.|.++++ .|++..+.+.            ......++.+++.++.+++.||+|||+....+..
T Consensus       295 ~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~  373 (502)
T TIGR00887       295 GSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFF  373 (502)
T ss_pred             HHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHH
Confidence            33344455677888899999975 5876543221            1233445667788999999999999999888777


Q ss_pred             HHHHHHHHHHhcCC--hhHHHHHHHHHHH-HHHhhhhhhHHHhhcccCcc-hhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        236 GPGLGILAASYSGC--NRLAVTVSFTLGM-GTMGAFLPSLKVNALDLSPN-YAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       236 ~~~~~~~~l~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~-~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      +.++++.++.....  ........+.+.. .......+.......|++|. .|+++.|+.+..+.++++++|.+.+.+.+
T Consensus       374 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~  453 (502)
T TIGR00887       374 ILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQ  453 (502)
T ss_pred             HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhc
Confidence            66666554443211  1111111111111 11222334455666788874 59999999999999999999999988876

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.61  E-value=1.8e-13  Score=158.61  Aligned_cols=280  Identities=13%  Similarity=0.072  Sum_probs=179.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH------HH--------HHHH---------------
Q psy13668         19 QSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA------WF--------ALWM---------------   69 (513)
Q Consensus        19 ~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~------~~--------~~~~---------------   69 (513)
                      ....++..+.+.++.+++.++.|+++||+ |.|.++.....+.++      +.        ++..               
T Consensus        46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~  124 (1146)
T PRK08633         46 VILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK  124 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence            34467888899999999999999999999 988877643211111      00        0000               


Q ss_pred             ------------------HHHhhhhhHHHHHHHHHHHHHhc--------cCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q psy13668         70 ------------------TFATGAQIGNVVSMAVSGLLIRY--------LGGWTSVFYVFGAVGLAWFALWMTFASSDPS  123 (513)
Q Consensus        70 ------------------~~~~~~~~g~~~~~~~~~~l~~~--------~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~  123 (513)
                                        +......+|.++++.+++.+...        ..+|++.+.+..+...++.++..+..++.|+
T Consensus       125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (1146)
T PRK08633        125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA  204 (1146)
T ss_pred             HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence                              00001136677888888887765        3245555544444433333333444555443


Q ss_pred             CccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchh-hhhHH
Q psy13668        124 ESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSIT-SVDLI  202 (513)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~-~~~~~  202 (513)
                      ..+..       .+++...   ..+.....++.+++++.++...+..++.....+.+..++|.|+++.+|++.. +.+++
T Consensus       205 ~~~~~-------~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~  274 (1146)
T PRK08633        205 AAPEV-------FDKKKYL---FPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYL  274 (1146)
T ss_pred             CCccc-------ccccccc---cHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHH
Confidence            32211       0000000   0000012345677888888877777777777778888999999999999998 99999


Q ss_pred             hchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-c
Q psy13668        203 SGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-P  281 (513)
Q Consensus       203 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p  281 (513)
                      .+...++.+++.++.|+++||.++++....+.++.+++++.+....+.....+..+..++ +.+...+.......+.. +
T Consensus       275 ~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~  353 (1146)
T PRK08633        275 LAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF-SAGLFIVPLNALIQFRAPE  353 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHhhHHHHHHHhhcCCc
Confidence            999999999999999999999999888877777777766666555432222222233332 23334444555555665 5


Q ss_pred             chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        282 NYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       282 ~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                      +.+|++.|+.+++.+++..+++.+.+.+.
T Consensus       354 ~~rg~~~~~~~~~~~lg~~~~~~~~~~l~  382 (1146)
T PRK08633        354 KELGKVLAANNFLQNVGMLLFLALTTLFS  382 (1146)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            67999999999999999887777665543

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.60  E-value=1e-13  Score=145.28  Aligned_cols=161  Identities=12%  Similarity=0.043  Sum_probs=110.7

Q ss_pred             chhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhc-hhHHHHHHHHHhhhhhcCCCcccchhh
Q psy13668        153 PWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISG-WPNRSVIVTYKMRTILSGPRLTSPFDF  231 (513)
Q Consensus       153 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~-~~~~~~~ig~~~~g~l~dr~~~~~~~~  231 (513)
                      ++++++++++.|...+..++.....+....|.+.|+.+.+|+|..+.+.+.. ...++.++|.+++|+++||+++|+...
T Consensus       214 ~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~  293 (491)
T PRK11010        214 PLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALM  293 (491)
T ss_pred             HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            3466777777776666666666666677788999988888999999999874 566899999999999999999888766


Q ss_pred             HhhHHHHHHHHH---HHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        232 SASVGPGLGILA---ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       232 ~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      .+.++.++..+.   +.....+.........+.....+...+.......+..+ +.+++..|+.+...+++..+++.+.|
T Consensus       294 i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G  373 (491)
T PRK11010        294 IFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAG  373 (491)
T ss_pred             HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            555443433222   22222222222222222222233334445566666665 45899999999999999999988999


Q ss_pred             Hhccch
Q psy13668        308 VLTPNW  313 (513)
Q Consensus       308 ~l~~~~  313 (513)
                      .+.|..
T Consensus       374 ~l~~~~  379 (491)
T PRK11010        374 WFVEAH  379 (491)
T ss_pred             HHHHHh
Confidence            888743

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.59  E-value=1.5e-13  Score=131.32  Aligned_cols=194  Identities=15%  Similarity=0.210  Sum_probs=144.0

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668         95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD  174 (513)
Q Consensus        95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~  174 (513)
                      |||....+.+.++++.++.|+.-. +++. ++..       ..   +         ..+-..++|+|.-|...+.+.+.+
T Consensus       163 gW~~aL~~WAl~allAl~~WlPq~-~r~~-~~~~-------~~---~---------~~~~~~vw~~~~aW~vtLfmGlqS  221 (395)
T COG2807         163 GWRGALGFWALLALLALLIWLPQA-LREQ-AASI-------AT---K---------LVSVRKVWRSPLAWQVTLFMGLQS  221 (395)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhc-cccc-cccc-------cc---c---------cccccccccCchhHHHHHHHHhhH
Confidence            799988888888888777666442 1110 1111       00   0         001156899999999999999999


Q ss_pred             HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-cccchhhHhhHHHHHHHHHHHhcCChhHH
Q psy13668        175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-LTSPFDFSASVGPGLGILAASYSGCNRLA  253 (513)
Q Consensus       175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  253 (513)
                      ..+|..+.|+|.++.|. |+|..++|.+.+...+.+++.++..-.+.+|. ++|+.......++.++..-+.+.+.+...
T Consensus       222 ~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~  300 (395)
T COG2807         222 LLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPI  300 (395)
T ss_pred             HHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence            99999999999999985 99999999999999999999999999999974 56777777777777777777676665543


Q ss_pred             HHHHHHHHHHHHhhhhhhH--HHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        254 VTVSFTLGMGTMGAFLPSL--KVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .. .+.++.+. +..++..  ......-.|++.+.-+|+.+.++++-.+.||.+.|++-|.
T Consensus       301 lw-~~llG~G~-G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa  359 (395)
T COG2807         301 LW-ALLLGLGQ-GGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDA  359 (395)
T ss_pred             HH-HHHHhCcc-chHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHh
Confidence            33 23333332 3333333  3333334478899999999999999999999999988874

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.59  E-value=1e-12  Score=133.41  Aligned_cols=262  Identities=13%  Similarity=0.048  Sum_probs=158.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH------HHH-----HHHH--------------------
Q psy13668         21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL------AWF-----ALWM--------------------   69 (513)
Q Consensus        21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~------~~~-----~~~~--------------------   69 (513)
                      ..|+..+...+|..++.++.|++.||+ |.|.++.....+..      .+.     ....                    
T Consensus        42 ~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~  120 (381)
T PRK03633         42 QVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALM  120 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            378899999999999999999999999 88887664221111      000     0000                    


Q ss_pred             -------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668         70 -------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM  136 (513)
Q Consensus        70 -------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  136 (513)
                                   .......+|..+++.+++.+.+.. .|+..+. .+........  .++.+.+|++.          +
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~----------~  186 (381)
T PRK03633        121 CSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL-MSVLPWV-TGLVLAAILP--LLFTRILNQQA----------E  186 (381)
T ss_pred             HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-cchHHHH-HHHHHHHHHH--HHHhcccCCCC----------C
Confidence                         000001245566666666655443 3333332 2222211111  11222211110          1


Q ss_pred             ccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHh
Q psy13668        137 HKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKM  216 (513)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~  216 (513)
                      + +          ++.+.++.++++.++......+..........+++|.|+++ .|.+..+.+.+.....++..++++.
T Consensus       187 ~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~  254 (381)
T PRK03633        187 N-H----------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWP  254 (381)
T ss_pred             C-C----------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            0 0          01123566778777765544444444555666789999987 5999999999888999999999999


Q ss_pred             hhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHH
Q psy13668        217 RTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIG  295 (513)
Q Consensus       217 ~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~  295 (513)
                      .|++.||+++|+....+.....++.....  . ...........+.+ .....+.......+.. +++++...+..+...
T Consensus       255 ~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (381)
T PRK03633        255 IGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAA-GFTLYPVAMAWACEKVEHHELVAMNQALLLSY  330 (381)
T ss_pred             hHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHH-HHhHHHHHHHHHHccCCHHHHHHHHHHHHHHH
Confidence            99999999999888777666666554433  1 11111112222222 2233455555555555 456788888888889


Q ss_pred             hHHhhHHHHHHHHhccch
Q psy13668        296 ALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       296 ~i~~~igp~l~g~l~~~~  313 (513)
                      ++|+.++|.+.|.+.|..
T Consensus       331 ~lG~~igp~~~G~l~~~~  348 (381)
T PRK03633        331 TVGSLLGPSFTAMLMQNY  348 (381)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999988754

>PRK15075 citrate-proton symporter; Provisional

Probab=99.58  E-value=1.8e-13  Score=141.47  Aligned_cols=248  Identities=15%  Similarity=0.145  Sum_probs=147.9

Q ss_pred             hhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q psy13668          8 NVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAV   85 (513)
Q Consensus         8 ~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (513)
                      ...++||+|  +|++..++...+.++|..+++.+++.+.... .                                    
T Consensus       139 ~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~-~------------------------------------  181 (434)
T PRK15075        139 SVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWL-S------------------------------------  181 (434)
T ss_pred             HHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C------------------------------------
Confidence            456888884  6777888888888888888888887775433 1                                    


Q ss_pred             HHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHH
Q psy13668         86 SGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIG  165 (513)
Q Consensus        86 ~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  165 (513)
                       ....+.. |||++|++.......    . ++.++++++.+..       .++++      +.+.+..+++..++++.+.
T Consensus       182 -~~~~~~~-gWr~~f~~~~~~~~~----~-~~~~~~~~e~~~~-------~~~~~------~~~~~~~~~~~~~~~~~~~  241 (434)
T PRK15075        182 -PAQMAEW-GWRIPFLIGCLIVPF----I-FLIRRSLEETEEF-------LARKH------RPSMREIFRSLAANWRIVL  241 (434)
T ss_pred             -HHHHhcc-chHHHHHHHHHHHHH----H-HHHHHhcCCCHHH-------HHhhh------ccccccHHHHHHHhHHHHH
Confidence             1112334 888888763322211    1 1223322222111       10000      0000111233345555443


Q ss_pred             H-HHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH-H
Q psy13668        166 L-IIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL-A  243 (513)
Q Consensus       166 ~-~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~-~  243 (513)
                      . ....+.....++....|.|.|+++.+|++..+.++...+..+++.++++..|+++||++||+....+.....+... .
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~  321 (434)
T PRK15075        242 AGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPA  321 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence            3 3334445566778889999999998999999999888889999999999999999999999887665444332221 1


Q ss_pred             HH-hcCCh-hHHHHH-HHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHh-HHhhHHHHHHHHhccch
Q psy13668        244 AS-YSGCN-RLAVTV-SFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGA-LSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       244 l~-~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~-i~~~igp~l~g~l~~~~  313 (513)
                      +. ..... ...... .+..+. +.+...+.......|..| +.||++.|+.+..+. +++.++|.+.|.+.|..
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~  395 (434)
T PRK15075        322 LSWLVAAPSFARMLAVELWLSF-LYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT  395 (434)
T ss_pred             HHHHHcCCchHHHHHHHHHHHH-HHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence            11 11222 211111 122222 223333334455566665 569999999765554 46888999999888753

>TIGR00901 2A0125 AmpG-related permease

Probab=99.58  E-value=1.8e-13  Score=137.63  Aligned_cols=234  Identities=15%  Similarity=0.090  Sum_probs=148.6

Q ss_pred             hhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q psy13668          8 NVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAV   85 (513)
Q Consensus         8 ~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~   85 (513)
                      .+++.|++|  ||+++.++...+..+|.++++++++.+.+.. |...                                 
T Consensus       105 ~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~-g~~~---------------------------------  150 (356)
T TIGR00901       105 DAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE-FANT---------------------------------  150 (356)
T ss_pred             HHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc-cccc---------------------------------
Confidence            445667663  4555677777777777777777777776655 2100                                 


Q ss_pred             HHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchh---
Q psy13668         86 SGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAP---  162 (513)
Q Consensus        86 ~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---  162 (513)
                          ...+ +||..|.+.++..++..+...+..||+ ++.+..       ++++.+.       .+.+++++++++.   
T Consensus       151 ----~~~~-~wr~~f~i~ai~~l~~~~~~~~~~~e~-~~~~~~-------~~~~~~~-------~~~~~~~~~~~~~~~~  210 (356)
T TIGR00901       151 ----GLIT-LWGYIFFWTALLILPGLLVTLFLAKEP-QEDASV-------PKPLTQA-------VLKPIREFFQRKNMIQ  210 (356)
T ss_pred             ----cccc-ccHHHHHHHHHHHHHHHHHHHHhccCC-Cccccc-------chhHHHH-------HHHHHHHHHHhcCchH
Confidence                0122 699999887776655444333344542 221111       1000000       0112355666664   


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH-HHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN-RSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI  241 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~  241 (513)
                      ++...+..++.....+....+.|.|+++ +|++..+.+.+..... +..+++.+++|++.||+++|+....+.++.++..
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~  289 (356)
T TIGR00901       211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTN  289 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence            7777777777778888889999999998 8999999988777655 6788999999999999999988877777666655


Q ss_pred             HHHHhcC----------ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHh
Q psy13668        242 LAASYSG----------CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGA  296 (513)
Q Consensus       242 ~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~  296 (513)
                      ..+.+..          .+.+.......+.....+...+.......+..| +++|+..|+.+...+
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       290 AGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             HHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence            5443321          122223333333344456667777777777765 669999999877654

>TIGR00898 2A0119 cation transport protein

Probab=99.58  E-value=6.5e-13  Score=140.14  Aligned_cols=289  Identities=12%  Similarity=0.032  Sum_probs=168.4

Q ss_pred             hhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-----------HHHHHh--
Q psy13668          9 VMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-----------WMTFAT--   73 (513)
Q Consensus         9 ~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-----------~~~~~~--   73 (513)
                      ++..||--  ++....++..+...+|.+++.++.|.++||+ |.|.++.+...+..+..+.           ...+..  
T Consensus       114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~  192 (505)
T TIGR00898       114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGM  192 (505)
T ss_pred             cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence            44445541  3455578889999999999999999999999 9888877533222111100           000000  


Q ss_pred             -------------------------------hhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCC
Q psy13668         74 -------------------------------GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDP  122 (513)
Q Consensus        74 -------------------------------~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p  122 (513)
                                                     ...+|.++++.++..+    .+||+.|++.+++.++..+.. ++++|+|
T Consensus       193 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~~wr~~~~~~~i~~~~~~~~~-~~~~esp  267 (505)
T TIGR00898       193 GIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI----PDWRWLQLAVSLPTFLFFLLS-WFVPESP  267 (505)
T ss_pred             hccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHH-HhcCCCh
Confidence                                           0113333344433322    259999999888877666555 5667766


Q ss_pred             CCc---cchhc-----------ccccccccchhh--hhc-cCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHH
Q psy13668        123 SES---THYVA-----------YGTAVMHKSNRF--IFS-FQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLP  185 (513)
Q Consensus       123 ~~~---~~~~~-----------~~~~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp  185 (513)
                      +..   .+.++           ++....++..+.  .++ ..+.++.++++++++++++...+...+...........++
T Consensus       268 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (505)
T TIGR00898       268 RWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLV  347 (505)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            321   00000           000000000000  000 0011124667888888877665554433222222111222


Q ss_pred             HHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh-HHHHHHHHHHHHH
Q psy13668        186 KYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR-LAVTVSFTLGMGT  264 (513)
Q Consensus       186 ~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~  264 (513)
                      .++ +.++.+..   .......+..+++.++.+++.||++||+....+.++.+++++++...+... ........++.++
T Consensus       348 ~~~-~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  423 (505)
T TIGR00898       348 LDL-GNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFG  423 (505)
T ss_pred             ccc-cccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Confidence            222 23344432   233345677788999999999999999999888888888777776665442 3333333333444


Q ss_pred             HhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        265 MGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       265 ~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      .....+.......|..| +.|+++.|+.+..+.+|++++|.+.+
T Consensus       424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~  467 (505)
T TIGR00898       424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY  467 (505)
T ss_pred             HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence            44555566677778887 45999999999999999999999987

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.58  E-value=8.3e-13  Score=134.97  Aligned_cols=266  Identities=12%  Similarity=-0.011  Sum_probs=163.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH-----------HHH-----H----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF-----------ALW-----M----------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~-----------~~~-----~----------------   69 (513)
                      .|+..+...++..+..++.|.++||+ |.|.+......+.....           +..     .                
T Consensus        48 ~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~  126 (400)
T PRK11646         48 VGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIK  126 (400)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67777777888888889999999999 87777653211111000           000     0                


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  +......+|..++|.+++.+. .. +||+.|++.++..++..++..+..++.++ ++         .+
T Consensus       127 ~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~-g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-~~---------~~  194 (400)
T PRK11646        127 LIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY-DFRLVCATGAVLFVLAAAFNAWLLPAYKL-ST---------VR  194 (400)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hHHHHHHHHHHHHHHHHHHHHHhCCcccc-cc---------cc
Confidence                        000001366788888888887 56 99999998877766655444444443211 00         00


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      ++          .+.++++++++++++...+..+...........++|.|+++..+ ++.+.+.+.....+....+....
T Consensus       195 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~  263 (400)
T PRK11646        195 TP----------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPI  263 (400)
T ss_pred             hh----------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHH
Confidence            00          01134677888888766555544444444456789999988755 66777877777766665555444


Q ss_pred             hhhc-CCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHH
Q psy13668        218 TILS-GPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIG  295 (513)
Q Consensus       218 g~l~-dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~  295 (513)
                      ++.. ||.+.++....+....+++...+...++...........+. ..+...+.......+..| +++|++.|+.+...
T Consensus       264 ~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~  342 (400)
T PRK11646        264 ARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYI-GSIIAEPARETLSASLADARARGSYMGFSRLGL  342 (400)
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHccHHHHHHhcCCcccchhhhhHHHHHH
Confidence            5555 45555555556665566665555544433222222222222 233444555666666664 77999999999999


Q ss_pred             hHHhhHHHHHHHHhccc
Q psy13668        296 ALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       296 ~i~~~igp~l~g~l~~~  312 (513)
                      +++..+||.+.|.+.|.
T Consensus       343 ~~g~~ig~~l~G~l~~~  359 (400)
T PRK11646        343 ALGGAIGYIGGGWLFDL  359 (400)
T ss_pred             HHHHHhcccchHHHHHH
Confidence            99999999999999875

>PRK10054 putative transporter; Provisional

Probab=99.57  E-value=5.4e-13  Score=136.10  Aligned_cols=269  Identities=12%  Similarity=0.063  Sum_probs=168.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH---HH-HH-------HH--H-------H-----------
Q psy13668         21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG---LA-WF-------AL--W-------M-----------   69 (513)
Q Consensus        21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~---~~-~~-------~~--~-------~-----------   69 (513)
                      ..++..+...++.++..++.|.++||+ |.|.+......+.   .. ..       .+  .       .           
T Consensus        44 ~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  122 (395)
T PRK10054         44 LIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFA  122 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            367778888888999999999999999 7777654321111   00 00       00  0       0           


Q ss_pred             -------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668         70 -------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM  136 (513)
Q Consensus        70 -------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  136 (513)
                                   +......+|.+++|++++.+.. . +||.+|++.+++.++..+...++.++++.+++         +
T Consensus       123 ~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~-g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~---------~  191 (395)
T PRK10054        123 DNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q-SINLPFWLAAICSAFPLVFIQIWVQRSEKAIA---------T  191 (395)
T ss_pred             HhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccCcHHHHHHHHHHHHHHHHHHHHhccccccc---------c
Confidence                         0000113667788888887764 5 99999998777766654444444443221111         0


Q ss_pred             ccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc--CcchhhhhHHhchhHHHHHHHH
Q psy13668        137 HKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL--HFSITSVDLISGWPNRSVIVTY  214 (513)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~--g~s~~~~~~~~~~~~~~~~ig~  214 (513)
                      ++++.          .+.++.+++++++...+..++..........+.+.|+.+..  +.+....+..............
T Consensus       192 ~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  261 (395)
T PRK10054        192 ETGSV----------WSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQ  261 (395)
T ss_pred             chhhh----------hhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeeh
Confidence            00000          01256788899888887777777776667778888876543  3445556666666666666777


Q ss_pred             HhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHH-HHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHH
Q psy13668        215 KMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVT-VSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVG  292 (513)
Q Consensus       215 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~  292 (513)
                      +..|++.||.++|+....+.....++...+....++.+... .....+.+ .....+.......+..| +.+|+..+..+
T Consensus       262 ~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~p~~~~~~~~~~p~~~~~~~~~~~~  340 (395)
T PRK10054        262 YSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVG-EIIYAPGEYMLIDHIAPPGMKASYFSAQS  340 (395)
T ss_pred             hHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHH-HHHHHhhHHHHHHHhCCcccceehHhHHH
Confidence            88899999999999888777666666655554333332222 22222222 23333444555666665 56888888755


Q ss_pred             HHHhHHhhHHHHHHHHhccch
Q psy13668        293 GIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       293 ~~~~i~~~igp~l~g~l~~~~  313 (513)
                       ...+|..+||.+.|.+.|..
T Consensus       341 -~~~~G~~~Gp~~~G~l~~~~  360 (395)
T PRK10054        341 -LGWLGAAINPLVSGVILTTL  360 (395)
T ss_pred             -HHHHHHHHHHHHHHHHHHHc
Confidence             67789999999999998744

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.57  E-value=1.6e-12  Score=132.99  Aligned_cols=268  Identities=15%  Similarity=0.044  Sum_probs=171.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHH---HHHH---H-----H---HHHHHH---------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAV---GLAW---F-----A---LWMTFA---------------   72 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~---~~~~---~-----~---~~~~~~---------------   72 (513)
                      .+...+...+|..++.+..|++.||+ |.|.+......+   +...   .     .   +...+.               
T Consensus        40 ~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~  118 (410)
T TIGR00885        40 AALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPY  118 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHH
Confidence            67888999999999999999999999 888776532111   1111   0     0   000000               


Q ss_pred             ------------------hhhhhHHHHHHHHHHHHHhc--------------------------cCCchHHHHHHHHHHH
Q psy13668         73 ------------------TGAQIGNVVSMAVSGLLIRY--------------------------LGGWTSVFYVFGAVGL  108 (513)
Q Consensus        73 ------------------~~~~~g~~~~~~~~~~l~~~--------------------------~~gWr~~f~i~~~~~~  108 (513)
                                        ....+|..+++.+++.+...                          . +||++|.+.+++.+
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~w~~~fl~~a~~~~  197 (410)
T TIGR00885       119 ILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLA-SVQTPYMIIGAVVL  197 (410)
T ss_pred             HHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence                              00135566677766655321                          2 69999998888776


Q ss_pred             HHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy13668        109 AWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYM  188 (513)
Q Consensus       109 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l  188 (513)
                      +..+.+. +.+ .|+.++ .       ++++        .....+.++++|+|+++...+..++......+..++++.|+
T Consensus       198 ~~~~~~~-~~~-~p~~~~-~-------~~~~--------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~  259 (410)
T TIGR00885       198 AVALLIM-LTK-MPALNH-S-------DAKQ--------ISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYA  259 (410)
T ss_pred             HHHHHHH-Hhc-CCCCCc-c-------cccc--------ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6554333 222 222110 0       1000        00011235778899998888888888778778889999999


Q ss_pred             HHhc-CcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhh
Q psy13668        189 KDVL-HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGA  267 (513)
Q Consensus       189 ~~~~-g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  267 (513)
                      ++.. +.+...++...........+|+++++++.||.++|++.....++..+++++....+...  ....+.....+...
T Consensus       260 ~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~--~~~~l~~~glf~s~  337 (410)
T TIGR00885       260 VRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHV--GLYCLTLCSAFMSL  337 (410)
T ss_pred             hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH--HHHHHHHHHHHHHH
Confidence            7642 34444455566666788899999999999999999988888777777777766654432  23333333445555


Q ss_pred             hhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        268 FLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       268 ~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .+|.......+..+++...+.+..... .+|+++.|.+.|.+.|.
T Consensus       338 ~fp~i~sl~~~~~g~~~~~~s~~l~~~-~~Gga~~p~l~G~~~d~  381 (410)
T TIGR00885       338 MFPTIYGIALKGLGQDTKYGAAGLVMA-IIGGGIVPPLQGFIIDM  381 (410)
T ss_pred             HHHHHHHHHHhhhhhhhhhhHHHHHHH-HhccchHHHHHHHHHHH
Confidence            557777777777666544433333332 39999999999988873

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.57  E-value=1.5e-12  Score=133.08  Aligned_cols=259  Identities=14%  Similarity=0.088  Sum_probs=159.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH------HHHH----------HHHHH---HHhh--------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG------LAWF----------ALWMT---FATG--------   74 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~------~~~~----------~~~~~---~~~~--------   74 (513)
                      .++..+...++.+++.++.|.++||+ |.|.++.....+.      +...          ..+.+   +..+        
T Consensus        53 ~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~  131 (399)
T PRK05122         53 AGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGT  131 (399)
T ss_pred             HHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcc
Confidence            78888999999999999999999999 8888776422111      1000          00000   0000        


Q ss_pred             -------------------------hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchh
Q psy13668         75 -------------------------AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYV  129 (513)
Q Consensus        75 -------------------------~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~  129 (513)
                                               ...|..+++++++.+.+.. |||..+.+..+..++..+    +.++.|++.+.. 
T Consensus       132 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-  205 (399)
T PRK05122        132 GSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG-GLAGLGLLIMLLALLGLL----LARPRPAVPPVK-  205 (399)
T ss_pred             hHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHH----HHhcCCCCCCCC-
Confidence                                     0245577888888888887 999988765554433221    222222221110 


Q ss_pred             cccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHH
Q psy13668        130 AYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRS  209 (513)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~  209 (513)
                            + ++            .++++.++  +.+.......+....+.....++|.|+++. |+  .+.+.......++
T Consensus       206 ------~-~~------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~  261 (399)
T PRK05122        206 ------G-ER------------LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAAR-GW--DGAALALTLFGVA  261 (399)
T ss_pred             ------c-cc------------hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cc--ccchHHHHHHHHH
Confidence                  0 00            01123332  223222333344455566778889988764 55  3455666777888


Q ss_pred             HHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHH
Q psy13668        210 VIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLM  288 (513)
Q Consensus       210 ~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~  288 (513)
                      ..++++..|++.||+++|+....+..+..++...+...++........+..+.+ .+...+.......+.. ++++|++.
T Consensus       262 ~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~-~~~~~~~~~~~~~~~~~~~~~g~~~  340 (399)
T PRK05122        262 FVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFG-FSLVFPALGVEAVKRVPPQNRGAAL  340 (399)
T ss_pred             HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-HHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            899999999999999999888777777777666655544333322222223332 2333344333344444 57799999


Q ss_pred             HHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        289 ALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       289 gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      |+.+...+++..++|.+.|.+.+.
T Consensus       341 g~~~~~~~~g~~~~~~~~g~l~~~  364 (399)
T PRK05122        341 GAYSVFLDLSLGITGPLAGLVASW  364 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999888763

>TIGR00889 2A0110 nucleoside transporter

Probab=99.56  E-value=1.2e-12  Score=134.54  Aligned_cols=272  Identities=11%  Similarity=-0.015  Sum_probs=169.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH----------------HHHHHHH------------
Q psy13668         21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF----------------ALWMTFA------------   72 (513)
Q Consensus        21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~----------------~~~~~~~------------   72 (513)
                      -.|+..+...++..+++++.|.++||.++.|.++.+...+..+..                .+..+..            
T Consensus        39 ~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~  118 (418)
T TIGR00889        39 EIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISY  118 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence            378899999999999999999999998444655553222211000                0000000            


Q ss_pred             ----------hh--------hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccc
Q psy13668         73 ----------TG--------AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTA  134 (513)
Q Consensus        73 ----------~~--------~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  134 (513)
                                ..        ..+|.++++.+++.+.... .|+ +|++.+++.++..++ .+.+||.|++++.       
T Consensus       119 ~~~~~~g~~~~~~~~~~r~~G~lG~~ig~~l~g~l~~~~-~~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~-------  188 (418)
T TIGR00889       119 ANLPQAGLDVVTDFPPIRVMGTIGFIAAMWAVSLLDIEL-SNI-QLYITAGSSALLGVF-ALTLPDIPVAKST-------  188 (418)
T ss_pred             HHHhhcCCCchhcCCCeeeehhHHHHHHHHHHHHhcccc-hhH-HHHHHHHHHHHHHHH-HhcCCCCCCCccc-------
Confidence                      00        1356777777777663322 455 355555554444433 3355554322110       


Q ss_pred             ccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcch--------hhhhHHhchh
Q psy13668        135 VMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSI--------TSVDLISGWP  206 (513)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~--------~~~~~~~~~~  206 (513)
                         ++.+..+    ..+.+.+.++|+++++...+..++..........+.|.|+++. |.++        ...+...+..
T Consensus       189 ---~~~~~~~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~  260 (418)
T TIGR00889       189 ---AKMSIKV----MLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLS  260 (418)
T ss_pred             ---cccCHHH----HhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHH
Confidence               0000000    0011234678889888887777777666666677888888764 5443        5568888888


Q ss_pred             HHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh--HHHHH--HHHHHHHHHhhhhhhHHHhhcccCc-
Q psy13668        207 NRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR--LAVTV--SFTLGMGTMGAFLPSLKVNALDLSP-  281 (513)
Q Consensus       207 ~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p-  281 (513)
                      .+..+++.+..|+++||+++|+.+..+.++..++...+.....+.  ...+.  .+..+.+ .+...+.......+..| 
T Consensus       261 ~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~-~~~~~~~~~~~i~~~~p~  339 (418)
T TIGR00889       261 QFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCA-FDFFNISGSVFVEKEVPV  339 (418)
T ss_pred             HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCH
Confidence            899999999999999999999999988888877766665533222  11111  1222222 23334444555666665 


Q ss_pred             chhHHHHHHHH-HHHhHHhhHHHHHHHHhcc
Q psy13668        282 NYAGTLMALVG-GIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       282 ~~~g~~~gi~~-~~~~i~~~igp~l~g~l~~  311 (513)
                      +++|++.|+.+ ....++.+++|.+.|.+.+
T Consensus       340 ~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~  370 (418)
T TIGR00889       340 HIRASAQGLFTLMCNGFGSLLGYILSGVMVE  370 (418)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            67999999997 5678999999999998876

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.56  E-value=4.2e-14  Score=144.48  Aligned_cols=151  Identities=13%  Similarity=0.052  Sum_probs=110.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668        160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL  239 (513)
Q Consensus       160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~  239 (513)
                      ++++....+..+............+|.++++.+|.|..+.++..+...++..++++..|+++||+|||+++..+.+..++
T Consensus        14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~   93 (399)
T PRK05122         14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCAL   93 (399)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHH
Confidence            46677777888888888777888999999988999999999999999999999999999999999999999988877666


Q ss_pred             HHHHHHhc---CChh---HHHHH--HHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        240 GILAASYS---GCNR---LAVTV--SFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       240 ~~~~l~~~---~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                      +.+.+...   .+..   ...++  .+..+.+ .+...+.......+.. +++|+++.++......++..++|.+.+.+.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~  172 (399)
T PRK05122         94 SGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIG-ESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY  172 (399)
T ss_pred             HHHHHHHhhhhhccchhHHHHHHHHHHHHHhh-HHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            54433322   1111   11111  1222222 2233333344444444 678999999988888888899999988876


Q ss_pred             c
Q psy13668        311 P  311 (513)
Q Consensus       311 ~  311 (513)
                      +
T Consensus       173 ~  173 (399)
T PRK05122        173 H  173 (399)
T ss_pred             H
Confidence            5

>KOG2504|consensus

Probab=99.55  E-value=2.6e-13  Score=141.01  Aligned_cols=205  Identities=15%  Similarity=0.150  Sum_probs=138.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH---H---HH-HHH--------------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL---A---WF-ALW--------------------------   68 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~---~---~~-~~~--------------------------   68 (513)
                      .+...+....-..+..|+.+.++|++ |-|.+-.+-+++..   +   ++ -+|                          
T Consensus        83 ~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~  161 (509)
T KOG2504|consen   83 IAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILG  161 (509)
T ss_pred             HHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhh
Confidence            56666666666677788999999999 88887665433221   1   11 011                          


Q ss_pred             -----------HHHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccc----------
Q psy13668         69 -----------MTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTH----------  127 (513)
Q Consensus        69 -----------~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~----------  127 (513)
                                 .+...++++|..+.|++...+.+.+ |||+.+.+.+.+.+..+.......|..+...+.          
T Consensus       162 ~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~-G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~  240 (509)
T KOG2504|consen  162 TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY-GWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAA  240 (509)
T ss_pred             hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccc
Confidence                       1333344577788888888999998 999999999888887777776666633322111          


Q ss_pred             -----------h--hccccccc---ccchhhhhccC-----CCCCCch---hhhccchhHHHHHHHHHHHHHHHHHHHhh
Q psy13668        128 -----------Y--VAYGTAVM---HKSNRFIFSFQ-----NLPPTPW---GKIATSAPVIGLIIAQIGHDFGLFTIVTD  183 (513)
Q Consensus       128 -----------~--~~~~~~~~---~~~~~~~~~~~-----~~~~~~~---~~~l~~~~~~~~~l~~~~~~~~~~~~~~~  183 (513)
                                 .  .......+   ..+....+.+.     ..+....   .++++++.++...+...+...+++....+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~  320 (509)
T KOG2504|consen  241 SVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVY  320 (509)
T ss_pred             cccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHH
Confidence                       0  00000000   00000000000     0011111   57889999999999999999999999999


Q ss_pred             HHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccch
Q psy13668        184 LPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPF  229 (513)
Q Consensus       184 lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~  229 (513)
                      +|.|.. .++++..++..+.+..++..++++++.|+++|+...++.
T Consensus       321 l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~  365 (509)
T KOG2504|consen  321 LPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL  365 (509)
T ss_pred             HHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH
Confidence            999998 569999999999999999999999999999999874433

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.55  E-value=3.1e-12  Score=127.53  Aligned_cols=246  Identities=23%  Similarity=0.312  Sum_probs=181.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-----------HH--------------------
Q psy13668         21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-----------WM--------------------   69 (513)
Q Consensus        21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-----------~~--------------------   69 (513)
                      ..+...+...++..++.++.|.+.||+ |.|..+.....+..+....           ..                    
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~  113 (352)
T cd06174          35 QAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIA  113 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHH
Confidence            367788888999999999999999999 8887655322211111100           00                    


Q ss_pred             -------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668         70 -------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM  136 (513)
Q Consensus        70 -------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  136 (513)
                                   .......+|..+++.+++.+.+.. +||+.+.+.+++.++..+...+.                   
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------------------  173 (352)
T cd06174         114 EWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-GWRWLFLILAILGLLLALLLLFL-------------------  173 (352)
T ss_pred             HhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence                         001111366778888888888877 89999988777666554433221                   


Q ss_pred             ccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHh
Q psy13668        137 HKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKM  216 (513)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~  216 (513)
                                        .     |+++...+..++..........+.|.++++.+|.+..+.+.......++..++++.
T Consensus       174 ------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  230 (352)
T cd06174         174 ------------------L-----RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALL  230 (352)
T ss_pred             ------------------H-----HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence                              0     45666777777888888889999999999988999999999999999999999999


Q ss_pred             hhhhcCCCcccc-hhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHH
Q psy13668        217 RTILSGPRLTSP-FDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGI  294 (513)
Q Consensus       217 ~g~l~dr~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~  294 (513)
                      .+++.||.+||+ ....+.....++...+...++... ......+.....+...+.......+..| ++|++..|+.+..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (352)
T cd06174         231 GGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLAL-LLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTF  309 (352)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHH
Confidence            999999999999 888888877777777766554322 2222222233344455566666666665 7799999999999


Q ss_pred             HhHHhhHHHHHHHHhcc
Q psy13668        295 GALSGTVSPYLVGVLTP  311 (513)
Q Consensus       295 ~~i~~~igp~l~g~l~~  311 (513)
                      .+++..++|.+.|.+.+
T Consensus       310 ~~~~~~i~~~i~g~l~~  326 (352)
T cd06174         310 GSLGGALGPLLAGLLLD  326 (352)
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999999886

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.55  E-value=2.8e-12  Score=130.79  Aligned_cols=271  Identities=11%  Similarity=-0.031  Sum_probs=168.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHH------HHHHHH--HHHHHHH---------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGA------VGLAWF--ALWMTFA---------------------   72 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~------~~~~~~--~~~~~~~---------------------   72 (513)
                      .+...+.+.++.++..++.|+++||+ |.|.++.....      +.+.+.  .......                     
T Consensus        40 ~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~a~~~pa~~a~i~~~~~  118 (393)
T PRK11195         40 QPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGCLLMLFGIHPLLAYGLVGIGAAAYSPAKYGILTELLP  118 (393)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            67788889999999999999999999 99888764221      111110  0000000                     


Q ss_pred             ------------hhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccch
Q psy13668         73 ------------TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSN  140 (513)
Q Consensus        73 ------------~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  140 (513)
                                  .....+.+++|.+++.+.+.  .|+..+.+.+...+.. .+..+.+|+.|++++..       +.+..
T Consensus       119 ~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~-------~~~~~  188 (393)
T PRK11195        119 GEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQ-------SWNPI  188 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH-HHHHhcCCCCccccccc-------CCCHH
Confidence                        01125677888888888764  5777776655443322 23334556544332211       11110


Q ss_pred             hhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhh
Q psy13668        141 RFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTIL  220 (513)
Q Consensus       141 ~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l  220 (513)
                      ...++    ....++.+++++.+.......++............|.|+++.+|+++.+.+.+.....++.+++++..+++
T Consensus       189 ~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l  264 (393)
T PRK11195        189 ALLRD----FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARL  264 (393)
T ss_pred             HHHHH----HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00000    00112456777776655554444445555666778889999999999999999999999999999999999


Q ss_pred             cCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHH-HHHHHHHhhhhhhHHHhhcccCcch--hHHHHHHHHHHHhH
Q psy13668        221 SGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSF-TLGMGTMGAFLPSLKVNALDLSPNY--AGTLMALVGGIGAL  297 (513)
Q Consensus       221 ~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~--~g~~~gi~~~~~~i  297 (513)
                      .||.++++....+.. .++....+...+ +.+...... ..+. +.+...+...+..++..|++  +|.+.++.+...++
T Consensus       265 ~~~~~~~~~~~~g~~-~~~~~~~~~~~~-~~~~~~~~~~~~G~-~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~  341 (393)
T PRK11195        265 VTLETVLRVLPAGIL-MGLVVLLMALQH-SLLPAYPLLILIGA-LGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENL  341 (393)
T ss_pred             hcCCcccchHHHHHH-HHHHHHHHHHHh-HHHHHHHHHHHHHH-hhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHH
Confidence            999988887766643 333333333322 222222222 2333 23344444555566767664  69999999999999


Q ss_pred             HhhHHHHHHHHhc
Q psy13668        298 SGTVSPYLVGVLT  310 (513)
Q Consensus       298 ~~~igp~l~g~l~  310 (513)
                      +..++..+.+.+.
T Consensus       342 ~~~~~~~~~~~~~  354 (393)
T PRK11195        342 AMLLMLGLYSLLV  354 (393)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999998887553

>KOG2532|consensus

Probab=99.54  E-value=4.1e-14  Score=145.16  Aligned_cols=258  Identities=25%  Similarity=0.423  Sum_probs=176.4

Q ss_pred             echhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-ccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHH-HH
Q psy13668          6 INNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRY-LGGWTSVFYVFGAVGLAWFALWMTFATGAQIGN-VV   81 (513)
Q Consensus         6 ~~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~-~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~-~~   81 (513)
                      .++.+.++|.|  ||++..++..++.++|++++.|++|.|++. . ||+++||++|.++++|.++|..+..+.|.-. -+
T Consensus       148 a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~-GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~i  226 (466)
T KOG2532|consen  148 AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSL-GWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNI  226 (466)
T ss_pred             hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCC-CCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence            35778899995  999999999999999999999999999999 6 9999999999999999999999999887321 00


Q ss_pred             HHHHHHHHHh-----c-----cCCchHHHHHHHHHHHHHHHHH-----HHhccCCCCCccchhcccccccccchhhhhcc
Q psy13668         82 SMAVSGLLIR-----Y-----LGGWTSVFYVFGAVGLAWFALW-----MTFASSDPSESTHYVAYGTAVMHKSNRFIFSF  146 (513)
Q Consensus        82 ~~~~~~~l~~-----~-----~~gWr~~f~i~~~~~~~~~~~~-----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  146 (513)
                      ..---..+.+     .     ..+|+.++.-..+.++.+.-..     ..++-    ..|.+       .++..+.+.++
T Consensus       227 s~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~----y~PtY-------~~~VL~f~v~~  295 (466)
T KOG2532|consen  227 SEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLT----YLPTY-------LKEVLGFDVRE  295 (466)
T ss_pred             CHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHH----HhhHH-------HHHHhCCChhh
Confidence            0000011110     0     1268877654333333222110     11111    11233       22222221110


Q ss_pred             CCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcc
Q psy13668        147 QNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLT  226 (513)
Q Consensus       147 ~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~  226 (513)
                              ...+..-++...++..+.            ..++.|++.                       ...++++..|
T Consensus       296 --------~G~~salP~l~~~~~k~~------------~g~lsD~l~-----------------------~~~ls~t~~r  332 (466)
T KOG2532|consen  296 --------TGFLSALPFLAMAIVKFV------------AGQLSDRLT-----------------------FRILSETTVR  332 (466)
T ss_pred             --------hhHHHHHHHHHHHHHHHH------------HHHHHHHHh-----------------------hccCchHhHH
Confidence                    233333333333332222            234444431                       1134555667


Q ss_pred             cchhhHhhHHHHHHHHHHHhcCChh-HHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668        227 SPFDFSASVGPGLGILAASYSGCNR-LAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYL  305 (513)
Q Consensus       227 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l  305 (513)
                      |....++..+.+++++.+.+.++.. +..+.++.+++++.+...+....+..|..|++.+..+|+.|+...+.+.++|.+
T Consensus       333 kifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~  412 (466)
T KOG2532|consen  333 KIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLL  412 (466)
T ss_pred             HHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            7778888999999999999988644 577788888899999999999999999999999999999999999999999999


Q ss_pred             HHHhccchhhhHH
Q psy13668        306 VGVLTPNWLAKQI  318 (513)
Q Consensus       306 ~g~l~~~~~~~~l  318 (513)
                      +|.+.++...+.|
T Consensus       413 vg~~~~~~t~~eW  425 (466)
T KOG2532|consen  413 VGIIVTDNTREEW  425 (466)
T ss_pred             eeeEeCCCCHHHH
Confidence            9999953355566

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.54  E-value=6.4e-13  Score=138.47  Aligned_cols=289  Identities=12%  Similarity=0.078  Sum_probs=164.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH---HHH-----------HHHH----------------
Q psy13668         20 SNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL---AWF-----------ALWM----------------   69 (513)
Q Consensus        20 ~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~---~~~-----------~~~~----------------   69 (513)
                      ...++..+...++..++.++.|++.||+ |.|.++.....+..   ...           .+..                
T Consensus        71 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~  149 (481)
T TIGR00879        71 SLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVP  149 (481)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHH
Confidence            4478888999999999999999999999 88887764222111   110           0000                


Q ss_pred             -----------------HHHhhhhhHHHHHHHHH---HHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc---c
Q psy13668         70 -----------------TFATGAQIGNVVSMAVS---GLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES---T  126 (513)
Q Consensus        70 -----------------~~~~~~~~g~~~~~~~~---~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~---~  126 (513)
                                       .......+|..+++.++   ....... +||+.|.+.++..++. ++..++++|.|...   .
T Consensus       150 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~w~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~~  227 (481)
T TIGR00879       150 MYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTL-GWRIPLGLQLIPAGLL-FLGLFFLPESPRWLVGKG  227 (481)
T ss_pred             HHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCc-cHHHHHHHHHHHHHHH-HHHHhcCCCChHHHHHcC
Confidence                             00001124455555555   3333445 9999999855544443 34445566655311   0


Q ss_pred             chhc-cc--cc---ccccchhhhh---------c-cCCCCCCchhhhcc------chhHHHHHHHHHHHHHHHHHHHhhH
Q psy13668        127 HYVA-YG--TA---VMHKSNRFIF---------S-FQNLPPTPWGKIAT------SAPVIGLIIAQIGHDFGLFTIVTDL  184 (513)
Q Consensus       127 ~~~~-~~--~~---~~~~~~~~~~---------~-~~~~~~~~~~~~l~------~~~~~~~~l~~~~~~~~~~~~~~~l  184 (513)
                      ..++ ..  ..   .++++.....         + ..+..+..+.+.++      .+.++...+..+...........+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (481)
T TIGR00879       228 RVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYS  307 (481)
T ss_pred             ChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHH
Confidence            0000 00  00   0000000000         0 00000011122222      1223333333333333334455667


Q ss_pred             HHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHh---cCCh------hH-HH
Q psy13668        185 PKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASY---SGCN------RL-AV  254 (513)
Q Consensus       185 p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~---~~~~------~~-~~  254 (513)
                      |.+++ .+|++..+.+.......++..+++++.|+++||.+||+....+....+++.+.+..   ....      .. ..
T Consensus       308 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (481)
T TIGR00879       308 PTIFE-NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAI  386 (481)
T ss_pred             HHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Confidence            76665 46999988889999999999999999999999999999888877766666555542   1111      22 22


Q ss_pred             HHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        255 TVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      ........++.....+.......|..| ++|+++.|+.+...+++++++|.+.+.+.+.
T Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~  445 (481)
T TIGR00879       387 VFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES  445 (481)
T ss_pred             HHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            222222222233333445566677776 5699999999999999999999999887763

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.54  E-value=9.6e-13  Score=134.08  Aligned_cols=217  Identities=12%  Similarity=-0.020  Sum_probs=141.2

Q ss_pred             hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCch
Q psy13668         75 AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPW  154 (513)
Q Consensus        75 ~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (513)
                      ..+|..+++...+.+.+.. |||..|++.+.+.++..+..++..+++|++ ++.       +++           +..+.
T Consensus       142 ~~lG~~~g~~~~~~l~~~~-gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~-~~~-------~~~-----------~~~~~  201 (390)
T TIGR02718       142 VMIGFFGGGAGTLVLFGKF-GQRPAFLLVACVPLASLVCVLWLKDRAVAS-PEA-------PLA-----------RRASL  201 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHcCCCCcCc-ccc-------chh-----------hHHHH
Confidence            3456666666666677776 899999888877766554444333332211 100       000           01134


Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH-HHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668        155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN-RSVIVTYKMRTILSGPRLTSPFDFSA  233 (513)
Q Consensus       155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~~~~~~~  233 (513)
                      ++.+|+|.++......++..........+.+.|++| .|+++++.+.+..... ...+++....|++.||+++|+....+
T Consensus       202 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~  280 (390)
T TIGR02718       202 FRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILG  280 (390)
T ss_pred             HHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            678888888887777777777778888899999988 5999999999888776 46778899999999999999887776


Q ss_pred             hHHHHHHHH-HHHhc----CChhHHHHHHHHHHHHHHhhhhhhHHHhh-cccCc-chhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668        234 SVGPGLGIL-AASYS----GCNRLAVTVSFTLGMGTMGAFLPSLKVNA-LDLSP-NYAGTLMALVGGIGALSGTVSPYLV  306 (513)
Q Consensus       234 ~~~~~~~~~-~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~  306 (513)
                      ....++... .....    ............+.....+...+...... ....+ +++|+..++.+...+++..++|.+.
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~  360 (390)
T TIGR02718       281 VGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIA  360 (390)
T ss_pred             HHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            654422222 21111    11112222222222222334434443333 33344 6799999999999999999999999


Q ss_pred             HHhccc
Q psy13668        307 GVLTPN  312 (513)
Q Consensus       307 g~l~~~  312 (513)
                      |.+.|.
T Consensus       361 G~l~~~  366 (390)
T TIGR02718       361 GYLTDR  366 (390)
T ss_pred             HHHHHH
Confidence            988864

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK12382 putative transporter; Provisional

Probab=99.54  E-value=6.9e-12  Score=127.85  Aligned_cols=259  Identities=12%  Similarity=0.062  Sum_probs=155.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH----HHH------------HHHHH------------HH--
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG----LAW------------FALWM------------TF--   71 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~----~~~------------~~~~~------------~~--   71 (513)
                      .++..+...++..++.++.|.++||+ |.|+++.......    ..+            .....            ..  
T Consensus        53 ~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~  131 (392)
T PRK12382         53 VGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLT  131 (392)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            67888899999999999999999999 8888766421110    000            00000            00  


Q ss_pred             ----------------------HhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchh
Q psy13668         72 ----------------------ATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYV  129 (513)
Q Consensus        72 ----------------------~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~  129 (513)
                                            ......|..+++++++.+.+.. |||..+.+..+..++..    .+.++.|++++.  
T Consensus       132 ~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--  204 (392)
T PRK12382        132 GALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF-GFAALALTTMVLPLLAW----AFNGTVRKVPAH--  204 (392)
T ss_pred             HHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHHHHH----HHHHhccCCCCC--
Confidence                                  0000245667888888888877 99987665433322221    122322221110  


Q ss_pred             cccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHH
Q psy13668        130 AYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRS  209 (513)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~  209 (513)
                            ++++            .+.++.++  .++...+..++..........+.|.|+++. +++  +.+.......++
T Consensus       205 ------~~~~------------~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~  261 (392)
T PRK12382        205 ------AGER------------PSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFASK-GWA--MAGFTLTAFGGA  261 (392)
T ss_pred             ------cccC------------chHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHhc-CCc--hhHHHHHHHHHH
Confidence                  0000            01122221  122222222333445556677888888764 554  345556667778


Q ss_pred             HHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHH
Q psy13668        210 VIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLM  288 (513)
Q Consensus       210 ~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~  288 (513)
                      ..++++..|++.||+++|+....+.....++...+...++...........+ ...+...+.......+.. +++||++.
T Consensus       262 ~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~  340 (392)
T PRK12382        262 FVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTG-AGCSLIFPALGVEVVKRVPSQVRGTAL  340 (392)
T ss_pred             HHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH-HHHHhHHHHHHHHHHHhcCHHHHHHHH
Confidence            8899999999999999999888877777776666555443322222222222 222333444444444444 67899999


Q ss_pred             HHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        289 ALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       289 gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      |+.+...+++..++|.+.|.+.+.
T Consensus       341 g~~~~~~~~g~~ig~~~~g~l~~~  364 (392)
T PRK12382        341 GGYAAFQDIAYGVSGPLAGMLATS  364 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999988874

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.52  E-value=3e-12  Score=134.06  Aligned_cols=130  Identities=10%  Similarity=0.057  Sum_probs=91.4

Q ss_pred             HHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc--CC-hhHHH
Q psy13668        178 FTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS--GC-NRLAV  254 (513)
Q Consensus       178 ~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~--~~-~~~~~  254 (513)
                      +...++.|.++++ .|++............+...++.++.++++||++||+....+.++.+++.+.+...  .. .....
T Consensus       288 ~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~  366 (479)
T PRK10077        288 NVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA  366 (479)
T ss_pred             hHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence            3445567777665 68888777777778888999999999999999999999988888877776665432  11 11122


Q ss_pred             HH-HHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHH
Q psy13668        255 TV-SFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGV  308 (513)
Q Consensus       255 ~~-~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~  308 (513)
                      .. .+..+.++.....+.......|..| ++|+++.|+.+...++++++++.+.+.
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~  422 (479)
T PRK10077        367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPM  422 (479)
T ss_pred             HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            11 1222222222233556677777776 679999999999999999999877643

>PRK12382 putative transporter; Provisional

Probab=99.51  E-value=2.2e-13  Score=138.87  Aligned_cols=152  Identities=16%  Similarity=0.112  Sum_probs=107.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668        160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL  239 (513)
Q Consensus       160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~  239 (513)
                      ++.++...+..++...........+|.++++.+|.|..+.+++.+...+...++++..|+++||+|||+....+.+...+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~   93 (392)
T PRK12382         14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGL   93 (392)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHH
Confidence            44556666666666666667777888899888999999999999999999999999999999999999998887776655


Q ss_pred             HHHHH---HhcCC----hhHHH-HHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        240 GILAA---SYSGC----NRLAV-TVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       240 ~~~~l---~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                      +.+..   ...+.    +.... +..+..+.+. +...+.......+.. +++|+++.+......+++..++|.+.+.+.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~  172 (392)
T PRK12382         94 AGLAYLLAAILPVSAPFKFALLVVGRLILGFGE-SQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH  172 (392)
T ss_pred             HHHHHHhhhccccchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            43322   11111    11111 1222223222 223333344444554 578999999999988999999999988776


Q ss_pred             cc
Q psy13668        311 PN  312 (513)
Q Consensus       311 ~~  312 (513)
                      +.
T Consensus       173 ~~  174 (392)
T PRK12382        173 SH  174 (392)
T ss_pred             hc
Confidence            53

>PRK10054 putative transporter; Provisional

Probab=99.50  E-value=7.6e-13  Score=135.01  Aligned_cols=150  Identities=15%  Similarity=0.057  Sum_probs=116.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG  240 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~  240 (513)
                      ++++.+.+..++...+.+....++|.|+++.+|+|..+.++..+...+...++++..|+++||++||+....+.+...++
T Consensus         7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~   86 (395)
T PRK10054          7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASG   86 (395)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHH
Confidence            45677777888888888899999999999999999999999999999999999999999999999999988888777777


Q ss_pred             HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .+.+.+.++.... +....+.........+.......|.. +++|+++.|+.+...++|..++|.+.+.+.+
T Consensus        87 ~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~  157 (395)
T PRK10054         87 FIAIPLVNNVTLV-VLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM  157 (395)
T ss_pred             HHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7666655443222 22222212222333444555556665 5679999999999999999999999998764

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.46  E-value=2.6e-13  Score=139.69  Aligned_cols=156  Identities=10%  Similarity=-0.048  Sum_probs=106.8

Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhH
Q psy13668        156 KIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASV  235 (513)
Q Consensus       156 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~  235 (513)
                      ..++++++|...+..++...+...+..++|.|+++.+|+|..+.++..+...+...++++..|+++||+|||+....+..
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~   84 (420)
T PRK09528          5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS   84 (420)
T ss_pred             hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence            45678899999988888888888899999999999999999999999999999999999999999999999998876555


Q ss_pred             HHHHHHHHHHh-cCChhHH--HHHHHHHHHHHHhhhhhhHHHhhccc---CcchhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        236 GPGLGILAASY-SGCNRLA--VTVSFTLGMGTMGAFLPSLKVNALDL---SPNYAGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       236 ~~~~~~~~l~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      +.+++...+.. .......  .......+....+...........+.   .++++|...|..+...++|..++|.+.|.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l  164 (420)
T PRK09528         85 GLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGIL  164 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHH
Confidence            44433322111 1010000  01111111111111111111111111   234577788888888999999999999988


Q ss_pred             cc
Q psy13668        310 TP  311 (513)
Q Consensus       310 ~~  311 (513)
                      .+
T Consensus       165 ~~  166 (420)
T PRK09528        165 FN  166 (420)
T ss_pred             Hh
Confidence            65

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.46  E-value=1.6e-12  Score=133.15  Aligned_cols=148  Identities=14%  Similarity=0.121  Sum_probs=107.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh-----hhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS-----VDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASV  235 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~-----~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~  235 (513)
                      +.+...++..++..........++|.+.++ +|.+..+     .+...+...+...++.+..|+++||++||+....+.+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~   92 (408)
T PRK09874         14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL   92 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence            345566667777777777788889999876 6887654     3778888899999999999999999999999888887


Q ss_pred             HHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        236 GPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       236 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ..+++.+.+...++.....+..+..+.+  +...+.......+.. +++|+.+.+..+....++..++|.+.+.+.+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~  167 (408)
T PRK09874         93 GMGIVMVLMGLAQNIWQFLILRALLGLL--GGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD  167 (408)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHh--hhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7777766665543333332222333322  223344444444444 5679999999999999999999999988765

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.46  E-value=4.8e-13  Score=137.57  Aligned_cols=155  Identities=17%  Similarity=0.113  Sum_probs=111.6

Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668        155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS  234 (513)
Q Consensus       155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~  234 (513)
                      +.+.+++.+....+..++...........+|.+.++. +.+..+.+++.+...++..++++..|+++||++||+.+..+.
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~   89 (417)
T PRK10489         11 SLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMM-TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLAR   89 (417)
T ss_pred             HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehH
Confidence            3344677887777777777777777777888888764 679999999999999999999999999999999999888776


Q ss_pred             HHHHHHHHHHH---hcCC-hhHHHHHH-HHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHH
Q psy13668        235 VGPGLGILAAS---YSGC-NRLAVTVS-FTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGV  308 (513)
Q Consensus       235 ~~~~~~~~~l~---~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~  308 (513)
                      +..+++...+.   +... +....... +..+. +.+...+.......+.. +++++++.++.+...+++..+||.+.+.
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~  168 (417)
T PRK10489         90 GTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGF-FGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGL  168 (417)
T ss_pred             HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-HHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHH
Confidence            66665544432   2222 22222222 22222 23333444445555555 5679999999999999999999999988


Q ss_pred             hcc
Q psy13668        309 LTP  311 (513)
Q Consensus       309 l~~  311 (513)
                      +.+
T Consensus       169 l~~  171 (417)
T PRK10489        169 LIA  171 (417)
T ss_pred             HHH
Confidence            765

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.45  E-value=1.4e-11  Score=126.06  Aligned_cols=156  Identities=12%  Similarity=-0.012  Sum_probs=94.1

Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH-HHHHHHHHhhhhhcCCCcccchhhH
Q psy13668        154 WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN-RSVIVTYKMRTILSGPRLTSPFDFS  232 (513)
Q Consensus       154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~~~~~~  232 (513)
                      +++++++|.++...+..++..........+.+.++.+.+|+++.+.+++..... .+..++.+++|++.||+++|+....
T Consensus       202 ~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~  281 (402)
T PRK11902        202 LRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLML  281 (402)
T ss_pred             HHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            467889998887777666655544444456666777888999999998876654 5689999999999999999887766


Q ss_pred             hhHHHHHHHHHH---HhcCChhHHHHHHHHHHHHH----HhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668        233 ASVGPGLGILAA---SYSGCNRLAVTVSFTLGMGT----MGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYL  305 (513)
Q Consensus       233 ~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l  305 (513)
                      +..+..+..+.+   ...+++.+.......+....    .+...........+..|   ++..++.+....++..+++.+
T Consensus       282 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~  358 (402)
T PRK11902        282 FGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS---ATQYALLSALASVGRVYVGPT  358 (402)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHHHHHHH
Confidence            665544443322   23333333222222111112    22223333444444443   333455555556666656667


Q ss_pred             HHHhccc
Q psy13668        306 VGVLTPN  312 (513)
Q Consensus       306 ~g~l~~~  312 (513)
                      .|.+.|.
T Consensus       359 ~G~l~~~  365 (402)
T PRK11902        359 SGYLVEA  365 (402)
T ss_pred             HHHHHHH
Confidence            7766654

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.45  E-value=5e-11  Score=124.56  Aligned_cols=277  Identities=16%  Similarity=0.161  Sum_probs=177.1

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHH----HHHHHH--------HHH----HHHhh-------
Q psy13668         18 QQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAV----GLAWFA--------LWM----TFATG-------   74 (513)
Q Consensus        18 r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~----~~~~~~--------~~~----~~~~~-------   74 (513)
                      -....+++.+...+...+..+++|.++|++ +.|.+....-.+    .....+        .|.    .+..+       
T Consensus        43 S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~  121 (524)
T PF05977_consen   43 SPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFN  121 (524)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence            344488888889999999999999999999 888887642111    111110        000    00000       


Q ss_pred             --------------------------hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccch
Q psy13668         75 --------------------------AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHY  128 (513)
Q Consensus        75 --------------------------~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~  128 (513)
                                                .++..+++|.++|.+.... |=.+.|.+-++.-++.. ......+.++++++ .
T Consensus       122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~-G~~~~f~inalsfl~~i-~~l~~~~~~~~~~~-~  198 (524)
T PF05977_consen  122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF-GAAAAFLINALSFLISI-LALLRWKPPPPPSS-L  198 (524)
T ss_pred             HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHccccccccc-c
Confidence                                      0244577788888887776 77777776554333322 22223332211111 1


Q ss_pred             hcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH
Q psy13668        129 VAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR  208 (513)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~  208 (513)
                             + +|+ ..    +.-+..++.+.+++.........++.+.....+...+|.+.++.+|.++...|++.+..++
T Consensus       199 -------~-~e~-~~----~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gv  265 (524)
T PF05977_consen  199 -------P-RER-FF----SALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGV  265 (524)
T ss_pred             -------c-hhh-hh----hhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHH
Confidence                   1 110 00    0011123444445655544444444444444555678999999999999999999999999


Q ss_pred             HHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHH
Q psy13668        209 SVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTL  287 (513)
Q Consensus       209 ~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~  287 (513)
                      +.++|.++.+++.+|.++++....+.+..+++++.+.+.++.+.....++..+. +.........+..+...| +.+|++
T Consensus       266 Gai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~-~~~~~~~~~~t~~Q~~~P~~~~GRv  344 (524)
T PF05977_consen  266 GAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGA-AWIIANSSLNTLVQLSVPDWVRGRV  344 (524)
T ss_pred             HHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHhHH
Confidence            999999999999999999888888888877777777666554443333333333 334444455555666655 569999


Q ss_pred             HHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        288 MALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       288 ~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .++.++....+..+|..+.|.+.+.
T Consensus       345 ~si~~~~~~g~~~lGsll~G~la~~  369 (524)
T PF05977_consen  345 FSIYQMVFFGGMPLGSLLWGFLADH  369 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999887764

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PRK03545 putative arabinose transporter; Provisional

Probab=99.45  E-value=2.6e-12  Score=130.87  Aligned_cols=147  Identities=13%  Similarity=0.036  Sum_probs=106.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL  242 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  242 (513)
                      .+...+..+......+.....+|.+ ++.+|.|..+.++..+...++..++.+..|++.||++||+++..+.+...++.+
T Consensus        11 ~~~l~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~   89 (390)
T PRK03545         11 VVTLALAAFIFNTTEFVPVGLLSDI-AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHV   89 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHcchHHH-HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH
Confidence            4444444444434444444456665 556899999999999999999999999999999999999999999888888877


Q ss_pred             HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ...+.++-....+..+..+.+. +...+.......+.. +++|+.+.|+.....+++..++|.+.+.+.+
T Consensus        90 ~~~~~~~~~~l~~~r~~~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~  158 (390)
T PRK03545         90 LSALAWNFTVLLISRIGIAFAH-AIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ  158 (390)
T ss_pred             HHHHhccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            7776655443333333333322 334444555566665 5679999999999999999999999988765

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.43  E-value=3.8e-12  Score=130.12  Aligned_cols=147  Identities=14%  Similarity=0.113  Sum_probs=116.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHH
Q psy13668        164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILA  243 (513)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  243 (513)
                      +......++...+.+....++|.|+++.+|.|..+.++......+...+.+++.|+++||++||+....+.+..+++.+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~   92 (400)
T PRK11646         13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT   92 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence            55667777778888888999999999999999999999999999999999999999999999999999988888888777


Q ss_pred             HHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       244 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ....++........+..+.+ .+...+.......+.. +++++++.|+.+...+++..+||.+.+.+.+
T Consensus        93 ~~~~~~~~~l~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~  160 (400)
T PRK11646         93 MAIAHEPWLLWLSCILSGLG-GTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ  160 (400)
T ss_pred             HHHhccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            76654433322222222222 3344455555566665 5689999999999999999999999988864

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.42  E-value=8.6e-12  Score=127.72  Aligned_cols=146  Identities=12%  Similarity=0.042  Sum_probs=106.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHH
Q psy13668        164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILA  243 (513)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  243 (513)
                      ...+...+......+......|.+.+ .+|.|..+.+++.+...++..++.+..|+++||+|||+....+.++..++.+.
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~   96 (406)
T PRK11551         18 GLCFLVALLEGLDLQSAGVAAPRMAQ-EFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLA   96 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence            33444444444445555556676655 47999999999999999999999999999999999999999888877777766


Q ss_pred             HHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       244 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ..+.++.....+..+..+. ..+...+.......|.. +++|+++.++.+....+++.++|.+.+.+.+
T Consensus        97 ~~~~~~~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~  164 (406)
T PRK11551         97 TAQAWDFPSLLVARLLTGV-GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG  164 (406)
T ss_pred             HHHhccHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            6665443333333333333 23344555566666766 4779999999999999999999988766655

>KOG1330|consensus

Probab=99.41  E-value=2.5e-13  Score=133.71  Aligned_cols=195  Identities=11%  Similarity=0.074  Sum_probs=123.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHH------HHHHHHHHHH-HHH-------------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYV------FGAVGLAWFA-LWM-------------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~------~g~~~~~~~~-~~~-------------------------   69 (513)
                      .|+....+.+...+..|+.|+|.||+ ++++++.+      .+.++..+.. .|.                         
T Consensus        70 ~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD  148 (493)
T KOG1330|consen   70 LGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIAD  148 (493)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhh
Confidence            55667778889999999999999999 98877542      2222222221 111                         


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc-cchhccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES-THYVAYGTAVM  136 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~  136 (513)
                                  ++....|.|..++.+.+..+......|||.|...++++++++++.+++.+|+++.. ++.       +
T Consensus       149 ~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~-------~  221 (493)
T KOG1330|consen  149 SFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEV-------D  221 (493)
T ss_pred             cCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccccccc-------c
Confidence                        22222245555555555555555523999999999999999988888877654321 111       1


Q ss_pred             ccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc---CcchhhhhHHhchhHHHHHHH
Q psy13668        137 HKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL---HFSITSVDLISGWPNRSVIVT  213 (513)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~---g~s~~~~~~~~~~~~~~~~ig  213 (513)
                      .+. +. .....+...+.+...+++.+....+.........-++..|.|.++...+   |.+..+...+..+...++.+|
T Consensus       222 ~~~-~~-~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lG  299 (493)
T KOG1330|consen  222 GEN-KM-VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLG  299 (493)
T ss_pred             cCC-cC-CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhh
Confidence            100 00 0111112233455566677766677666666666667777777766543   456667777888888899999


Q ss_pred             HHhhhhhcCCCcc
Q psy13668        214 YKMRTILSGPRLT  226 (513)
Q Consensus       214 ~~~~g~l~dr~~~  226 (513)
                      .+.+|.++||+.|
T Consensus       300 vl~Ggiisd~~~~  312 (493)
T KOG1330|consen  300 VLFGGIISDKLSR  312 (493)
T ss_pred             heehHHHHHHHHH
Confidence            9999999999554

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.41  E-value=2e-12  Score=128.80  Aligned_cols=270  Identities=19%  Similarity=0.185  Sum_probs=180.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHH
Q psy13668        165 GLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAA  244 (513)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l  244 (513)
                      ......+......+......|.+.++ +|.+..+.+.......+...++.+..|+++||++||+....+.+...++....
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~   81 (352)
T cd06174           3 LLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL   81 (352)
T ss_pred             HHHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHH
Confidence            34455566666777777888888766 59999999999999999999999999999999999999888888888888777


Q ss_pred             HhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccchhhh-------
Q psy13668        245 SYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAK-------  316 (513)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~~~-------  316 (513)
                      ...++... ......+.....+...+.......|..| ++|++..++.+....++..++|.+.+.+.+....+       
T Consensus        82 ~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  160 (352)
T cd06174          82 AFASSLWL-LLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILA  160 (352)
T ss_pred             HHhccHHH-HHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            66643322 2222222222334555666777777776 57999999999999999999999998887632000       


Q ss_pred             ----------------------------------------HHHh--h--------------------------hhhhhhh
Q psy13668        317 ----------------------------------------QICN--S--------------------------VTYKMRT  328 (513)
Q Consensus       317 ----------------------------------------~l~~--~--------------------------~~~~~~~  328 (513)
                                                              ...+  +                          ..++.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  240 (352)
T cd06174         161 ILGLLLALLLLFLLRLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGR  240 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                                                    0000  0                          0011010


Q ss_pred             ccCCCCCCCc-cchhhcccchhhhhhhhccCCchhHHHHHHHhhhcccccccccccccccC-CCCCccchhhhhhhhhhh
Q psy13668        329 ILSGPTLTSP-FDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALD-LSPNYAGTLMALVGGIGA  406 (513)
Q Consensus       329 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~  406 (513)
                              .. ....+.....++.+.....+ +.........+.....+...+.......+ .+++++++.+|+.+..++
T Consensus       241 --------~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (352)
T cd06174         241 --------RRLLLLIGLLLAALGLLLLALAP-SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGS  311 (352)
T ss_pred             --------hhHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence                    01 22223333333333333332 22222222222222333334444444444 455889999999999999


Q ss_pred             cccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHh
Q psy13668        407 LSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCF  463 (513)
Q Consensus       407 ~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~  463 (513)
                      ++..++|.+.|.+.+..                  +|+.+|.+.+++.+++.++..+
T Consensus       312 ~~~~i~~~i~g~l~~~~------------------~~~~~~~~~~~~~~i~~i~~~~  350 (352)
T cd06174         312 LGGALGPLLAGLLLDTG------------------GYGGVFLILAALALLAALLLLL  350 (352)
T ss_pred             HHHHHHHHHHHHHhccc------------------CcchHHHHHHHHHHHHHHHhee
Confidence            99999999999998743                  7889999999998888776543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.41  E-value=3.2e-12  Score=129.80  Aligned_cols=149  Identities=14%  Similarity=0.067  Sum_probs=114.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG  240 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~  240 (513)
                      ++++..++..++...........+|.+.++ +|.|..+.+++.+...++..++++..|+++||+|||+....+.+..+++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~   84 (381)
T PRK03633          6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG   84 (381)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            457777788888777777788899999876 6999999999999999999999999999999999999999888888887


Q ss_pred             HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHH-hhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKV-NALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .......++.....+..+..+.+ .+...+.... ...+..+++|+.+.+..+...++|..++|.+.+.+.+
T Consensus        85 ~~~~~~~~~~~~l~~~~~l~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~  155 (381)
T PRK03633         85 CAGLGLMVGFWSWLAWRFVAGIG-CAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST  155 (381)
T ss_pred             HHHHHHhccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            77766655433333333333333 2333333333 3334446789999999999999999999999988765

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.40  E-value=1.4e-11  Score=132.35  Aligned_cols=206  Identities=15%  Similarity=0.154  Sum_probs=135.3

Q ss_pred             eechhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q psy13668          5 VINNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVS   82 (513)
Q Consensus         5 ~~~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~   82 (513)
                      .+..+.+.||+|  +|+++.++..++..+|+++|++++|.+.+.+.+|+...-                   .+.+  +.
T Consensus       191 ~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~-------------------~~~~--l~  249 (633)
T TIGR00805       191 PLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNT-------------------EDVI--LT  249 (633)
T ss_pred             hcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCC-------------------CCCC--CC
Confidence            345678889994  577889999999999999999999999876535533210                   0000  00


Q ss_pred             HHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhh---hcc--C------CCCC
Q psy13668         83 MAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFI---FSF--Q------NLPP  151 (513)
Q Consensus        83 ~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~--~------~~~~  151 (513)
                      |---    ....+|+..|++.++++++.++.++++.++.|++.+.. +.    +.++++..   .+.  .      +...
T Consensus       250 ~~dp----rWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (633)
T TIGR00805       250 PTDP----RWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRV-NV----DVHETEKLEKSEDKSRKKNSDITKDFP  320 (633)
T ss_pred             CCCc----cHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCccccc-ch----hhhhhhcccccccccchhhhhhHHHHH
Confidence            0000    00004888898888888877766555544444332110 00    00000000   000  0      0001


Q ss_pred             CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH-HHHHHHHhhhhhcCCCccc--c
Q psy13668        152 TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR-SVIVTYKMRTILSGPRLTS--P  228 (513)
Q Consensus       152 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~--~  228 (513)
                      ..++++++++.++...+..++....++++.+|+|.|+++.+|+++.+++++.....+ +.++|.+++|+++||++.+  +
T Consensus       321 ~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~  400 (633)
T TIGR00805       321 KIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKK  400 (633)
T ss_pred             HHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHH
Confidence            235678999999999999999999999999999999999999999999999887766 6789999999999998843  4


Q ss_pred             hhhHhhHHHHHH
Q psy13668        229 FDFSASVGPGLG  240 (513)
Q Consensus       229 ~~~~~~~~~~~~  240 (513)
                      ....+.+...+.
T Consensus       401 ~~~~~~~~~~~~  412 (633)
T TIGR00805       401 AAYFAICLSTLS  412 (633)
T ss_pred             HHHHHHHHHHHH
Confidence            444444433333

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>TIGR00897 2A0118 polyol permease family

Probab=99.38  E-value=6.7e-12  Score=128.41  Aligned_cols=150  Identities=11%  Similarity=-0.051  Sum_probs=106.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG  240 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~  240 (513)
                      +.+....+..++.....+....++|.++++ +|.|..+.++..+...++..++.+..|++.||++||+....+..+..++
T Consensus        13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~   91 (402)
T TIGR00897        13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG   91 (402)
T ss_pred             chhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence            455566677777777777777788998865 6999999999999999999999999999999999999998888877776


Q ss_pred             HHHHHh---cCChhHHHHH-HHHHHHHHHhhhhhhHHHhhcc-cCcchhHHHHHHHHHHHhHHh-hHHHHHHHHhccc
Q psy13668        241 ILAASY---SGCNRLAVTV-SFTLGMGTMGAFLPSLKVNALD-LSPNYAGTLMALVGGIGALSG-TVSPYLVGVLTPN  312 (513)
Q Consensus       241 ~~~l~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~gi~~~~~~i~~-~igp~l~g~l~~~  312 (513)
                      .+....   ...+...... ....+.+. +...+.......+ .++++|++++|+.+...+++. ..+|.+.+.+.+.
T Consensus        92 ~~~~~~~~~~~~~~~~l~~~~~i~G~g~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~  168 (402)
T TIGR00897        92 HAAFIVFGLGHANYPLILLFYGIRGLGY-PLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA  168 (402)
T ss_pred             HHHHHHHhccCccHHHHHHHHHHHHcch-HHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            554321   1222322222 22222222 2222333333334 457889999999999999886 5788888777653

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.36  E-value=2.8e-10  Score=110.75  Aligned_cols=271  Identities=14%  Similarity=0.065  Sum_probs=187.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHH-HH--HHHHHHH-----------HHH--H----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYV-FG--AVGLAWF-----------ALW--M----------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~-~g--~~~~~~~-----------~~~--~----------------   69 (513)
                      .+.+...+..|..+..+..|++.+|+ |.+.-... .+  .+++...           ++.  +                
T Consensus        50 a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~  128 (422)
T COG0738          50 ASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPY  128 (422)
T ss_pred             HHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchH
Confidence            56778888899999999999999999 76554432 11  1111111           000  0                


Q ss_pred             ---------------HHHhhhhhHHHHHHHHHHHHHhc------------------cCCchHHHHHHHHHHHHHHHHHHH
Q psy13668         70 ---------------TFATGAQIGNVVSMAVSGLLIRY------------------LGGWTSVFYVFGAVGLAWFALWMT  116 (513)
Q Consensus        70 ---------------~~~~~~~~g~~~~~~~~~~l~~~------------------~~gWr~~f~i~~~~~~~~~~~~~~  116 (513)
                                     +.....++|.+++|++++.+..+                  ...||++|...+...+++.+....
T Consensus       129 v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~  208 (422)
T COG0738         129 VTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILL  208 (422)
T ss_pred             HHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHh
Confidence                           01111147889999988877662                  125888888777766666544432


Q ss_pred             hccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcch
Q psy13668        117 FASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSI  196 (513)
Q Consensus       117 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~  196 (513)
                      .  +.|+.++..       +++        .+.+.....+++++|.++...+..|++-......-+|++.|+.+..|.+.
T Consensus       209 ~--k~p~~~~~~-------~~~--------~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~  271 (422)
T COG0738         209 S--KLPDLQVAA-------PSL--------GASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNE  271 (422)
T ss_pred             c--cCCcCCccc-------ccc--------cccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccH
Confidence            2  223222111       100        00011134788999999999999999999999999999999999889999


Q ss_pred             hhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhh
Q psy13668        197 TSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNA  276 (513)
Q Consensus       197 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (513)
                      .++....+....+.++|++++.++..|+...|.+....++..+.++...+.++  ...+....+...+++..+|......
T Consensus       272 ~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g--~v~~~~l~~ig~F~simfPTIfsla  349 (422)
T COG0738         272 QQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGG--VVALYALFLIGLFNSIMFPTIFSLA  349 (422)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            99999999999999999999999999999888887777666666666665555  4444444455566777888887777


Q ss_pred             cccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668        277 LDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       277 ~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      .+..|++... .|..-....+|+++.|.+.|++.|..
T Consensus       350 l~~l~~~ts~-~s~~l~maivGGAiiP~l~G~i~d~~  385 (422)
T COG0738         350 LKNLGEHTSV-GSGLLVMAIVGGAIIPPLQGVIADMF  385 (422)
T ss_pred             HhccCccccc-cceeeeeheecchHHHHHHHHHHHhh
Confidence            7777744333 33444567789999999999888754

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.34  E-value=2.4e-11  Score=125.45  Aligned_cols=201  Identities=18%  Similarity=0.129  Sum_probs=146.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668         95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD  174 (513)
Q Consensus        95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~  174 (513)
                      +|++...+.+++.++..++..+..+|++++.+..         +       ++..-+..++.+++||++.......++..
T Consensus       175 ~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~---------~-------~~~~~~~~~~~~~~nr~~~~l~~~~~~~~  238 (428)
T PF13347_consen  175 GYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQ---------E-------KKISLRDSLRSLFRNRPFRILLLAFFLQW  238 (428)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhheeeecccccccc---------c-------cccccccchhhhcccchHHHHHHHHHHHH
Confidence            6999988888888887777776766621111110         0       11111234578899999999988888888


Q ss_pred             HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC-ChhHH
Q psy13668        175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG-CNRLA  253 (513)
Q Consensus       175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~  253 (513)
                      ..........+.|.++..|.+ ...+.+.....+..+++.++.++++||+|+|+....+..+.+++...+...+ .+.+.
T Consensus       239 ~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (428)
T PF13347_consen  239 LAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWL  317 (428)
T ss_pred             hhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHH
Confidence            888877888888888888877 5566777788899999999999999999999999999998888888777766 44444


Q ss_pred             HHHHHHHHHHHHhhhhhhHHHhhcccCc--------chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        254 VTVSFTLGMGTMGAFLPSLKVNALDLSP--------NYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      ..+...+.....+...........|..+        +..|...|+.+....++.++++.+.+.+++.
T Consensus       318 ~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~  384 (428)
T PF13347_consen  318 VLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL  384 (428)
T ss_pred             HHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence            4444444333344444555555555542        4479999999999999999999999988753

>KOG0569|consensus

Probab=99.32  E-value=5.3e-10  Score=113.91  Aligned_cols=278  Identities=13%  Similarity=0.068  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHH--------------HHHhhh------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWM--------------TFATGA------------   75 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~--------------~~~~~~------------   75 (513)
                      -+...+.+.+|.++|..++++++|++ |+|..+++..++...-+....              .+..+.            
T Consensus        62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmy  140 (485)
T KOG0569|consen   62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMY  140 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            45677889999999999999999999 999888865544433221111              111110            


Q ss_pred             -----------------hhHHHHHHHHHHH-----HHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc----cc--
Q psy13668         76 -----------------QIGNVVSMAVSGL-----LIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES----TH--  127 (513)
Q Consensus        76 -----------------~~g~~~~~~~~~~-----l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~----~~--  127 (513)
                                       .++..++-.++..     +......|++.+....+++++... ..++.||+|+..    .+  
T Consensus       141 l~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESPk~Ll~~k~~~~  219 (485)
T KOG0569|consen  141 LTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESPKYLLIKKGDEE  219 (485)
T ss_pred             HhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCcchHHHHcCCHH
Confidence                             0122222222211     122223799998887777666554 344668887421    00  


Q ss_pred             -----hhcccccccccc-----hhhhhcc--CCCCCCchhhhccchhHHHH-----HHHHHHHHHHHHHHHhhHHHHHHH
Q psy13668        128 -----YVAYGTAVMHKS-----NRFIFSF--QNLPPTPWGKIATSAPVIGL-----IIAQIGHDFGLFTIVTDLPKYMKD  190 (513)
Q Consensus       128 -----~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~l~~~~~~~~-----~l~~~~~~~~~~~~~~~lp~~l~~  190 (513)
                           ...|....++++     .+..++.  .+.+..++++++++++.-.-     .+...-...+.+....|.-.++++
T Consensus       220 ~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~  299 (485)
T KOG0569|consen  220 EARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT  299 (485)
T ss_pred             HHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH
Confidence                 000110000000     0111111  12255677888887543322     222222333344556666666666


Q ss_pred             hcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC----Ch-hHH----HHHHHHHH
Q psy13668        191 VLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG----CN-RLA----VTVSFTLG  261 (513)
Q Consensus       191 ~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~----~~-~~~----~~~~~~~~  261 (513)
                       .|++..++.......+....+.++.+.++.||.|||+.+..+..++.++.+++....    .. .+.    ....+...
T Consensus       300 -aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~  378 (485)
T KOG0569|consen  300 -AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFI  378 (485)
T ss_pred             -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence             499999999999999999999999999999999999999999888887776655321    11 111    11122223


Q ss_pred             HHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHH
Q psy13668        262 MGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVS  302 (513)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~ig  302 (513)
                      ..+.....|..+....|++| +.|..+.++......+...+-
T Consensus       379 ~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv  420 (485)
T KOG0569|consen  379 ISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIV  420 (485)
T ss_pred             HhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHH
Confidence            33344445566778888886 569999888877765554443

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.32  E-value=5.8e-11  Score=121.30  Aligned_cols=141  Identities=12%  Similarity=0.016  Sum_probs=101.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668        160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL  239 (513)
Q Consensus       160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~  239 (513)
                      ++.++..++..+......+.+....+.+-++.+|+|..|.+++.+.+.+...+.++..|++.||+|.|++...+.+...+
T Consensus        33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i  112 (462)
T PRK15034         33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII  112 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence            35777777777766666666666666665656999999999999999999999999999999999999999888888887


Q ss_pred             HHHHHHhcC----ChhH-HHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHH
Q psy13668        240 GILAASYSG----CNRL-AVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVS  302 (513)
Q Consensus       240 ~~~~l~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~ig  302 (513)
                      ..+.+.+..    ++.. ..+..+..+.  .+...+.......+.+| +++|++.|+....+++|..++
T Consensus       113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gi--gg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~  179 (462)
T PRK15034        113 PCVWLGIAVQNPNTPFGIFIVIALLCGF--AGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVM  179 (462)
T ss_pred             HHHHHHHHHcccCCCHHHHHHHHHHHHH--HHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHH
Confidence            777776541    2222 2223333333  35555666666677665 669999999966665555433

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.32  E-value=1.3e-11  Score=124.66  Aligned_cols=143  Identities=10%  Similarity=-0.014  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH-hhHHHHHHHHHHHh
Q psy13668        168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS-ASVGPGLGILAASY  246 (513)
Q Consensus       168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~~l~~  246 (513)
                      +..++...+.......+|.|+++.+|.|..+.+++.+...+...+..+..|+++||+|||+.... +.....++.+....
T Consensus         4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~   83 (375)
T TIGR00899         4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW   83 (375)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence            34556666667777889999998899999999999999999999999999999999998886554 44444444444444


Q ss_pred             cCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHH--HHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        247 SGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTL--MALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~--~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .++.....+..+..+. ..+...+.......+..| +.|+.+  .+......+++..++|.+.+.+.+
T Consensus        84 ~~~~~~l~~~~~~~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~  150 (375)
T TIGR00899        84 NRNYFLLLVLGVLLSS-FASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL  150 (375)
T ss_pred             cchHHHHHHHHHHHHh-hhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH
Confidence            3332222222222222 223334444455555554 335433  677777888999999999988876

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK09848 glucuronide transporter; Provisional

Probab=99.32  E-value=1.2e-10  Score=120.99  Aligned_cols=158  Identities=9%  Similarity=-0.002  Sum_probs=115.0

Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668        154 WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA  233 (513)
Q Consensus       154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~  233 (513)
                      ++.+++|++++...+..++....+.....+.|.|+++.+|.+....++......++.+++.++.+++.||+++|+....+
T Consensus       221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g  300 (448)
T PRK09848        221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIG  300 (448)
T ss_pred             HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence            46789999999988888888888888888888899988888777666655555677888999999999999999998888


Q ss_pred             hHHHHHHHHHHHhcCChh-HHHHHHHHHHHHHHhhhhhhHHHhhcccCc--------chhHHHHHHHHHHHhHHhhHHHH
Q psy13668        234 SVGPGLGILAASYSGCNR-LAVTVSFTLGMGTMGAFLPSLKVNALDLSP--------NYAGTLMALVGGIGALSGTVSPY  304 (513)
Q Consensus       234 ~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~gi~~~~~~i~~~igp~  304 (513)
                      .++..++.+.+...+... +.......+.....+...+...+...|..+        +..|...|+.++...++.++++.
T Consensus       301 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~  380 (448)
T PRK09848        301 ALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS  380 (448)
T ss_pred             HHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence            887777766665544322 222222222222233333444445455543        23699999999999999999999


Q ss_pred             HHHHhcc
Q psy13668        305 LVGVLTP  311 (513)
Q Consensus       305 l~g~l~~  311 (513)
                      +.|.+++
T Consensus       381 i~g~~l~  387 (448)
T PRK09848        381 IPAFILG  387 (448)
T ss_pred             HHHHHHH
Confidence            9887764

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.32  E-value=2.9e-11  Score=126.33  Aligned_cols=156  Identities=16%  Similarity=0.066  Sum_probs=116.4

Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668        155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS  234 (513)
Q Consensus       155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~  234 (513)
                      ...+|++.|..+++...+.+.+.+....-++-+..+ ..-|+...+++.....+..++-.+.+|.+.||+.||+++...-
T Consensus         4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~   82 (524)
T PF05977_consen    4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQ   82 (524)
T ss_pred             cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Confidence            456888999889888888888887777777655554 4667888888888889999999999999999999999988877


Q ss_pred             HHHHHHHHHH---HhcCChhHHHHHHHHHHH-HHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        235 VGPGLGILAA---SYSGCNRLAVTVSFTLGM-GTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       235 ~~~~~~~~~l---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      +..++....+   ...+....+.++.+.+.. .+.....|...+...++.| ++...+.++.+...++...+||.+.|.+
T Consensus        83 ~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~L  162 (524)
T PF05977_consen   83 LLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGIL  162 (524)
T ss_pred             HHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHH
Confidence            6555443332   223332333333333333 3355666777888888776 5688999999999999999999999988


Q ss_pred             cc
Q psy13668        310 TP  311 (513)
Q Consensus       310 ~~  311 (513)
                      +.
T Consensus       163 va  164 (524)
T PF05977_consen  163 VA  164 (524)
T ss_pred             HH
Confidence            76

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.32  E-value=3.1e-11  Score=122.64  Aligned_cols=149  Identities=13%  Similarity=0.066  Sum_probs=114.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG  240 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~  240 (513)
                      +.++...+..+......+.....+|.+. +.+|.|..+.++..+...++..++.+..|++.||++||+.+..+....+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~   81 (382)
T PRK10091          3 KVILSLALGTFGLGMAEFGIMGVLTELA-HDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG   81 (382)
T ss_pred             chHHHHHHHHHHHHhhHHHHHhChHHHH-HHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence            4566677777777777777778888765 457999999999999999999999999999999999999999998888888


Q ss_pred             HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .+.....++.....+..+..+.+. +...+.......+..+ ++++.+.++......++..++|.+.+.+.+
T Consensus        82 ~~l~~~~~~~~~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~  152 (382)
T PRK10091         82 NAMFTLSSSYLMLAIGRLVSGFPH-GAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ  152 (382)
T ss_pred             HHHHHHhCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence            877777665444444433333332 2223344455556664 569999999999999999999998887766

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.30  E-value=1.4e-10  Score=114.70  Aligned_cols=288  Identities=16%  Similarity=0.094  Sum_probs=196.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG  240 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~  240 (513)
                      ...+.+.+..|......+.....+|..-+| +|.|..++|.+.+.+..+..++.+....+.||+.||+++...+.+..++
T Consensus        13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~   91 (394)
T COG2814          13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS   91 (394)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence            456778888888889999999999998776 6999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccchhh--hH
Q psy13668        241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLA--KQ  317 (513)
Q Consensus       241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~~--~~  317 (513)
                      .++....++-....+.-+..+.. .+..++.......++. |++|+.+.++..+...++-.+|..+..++-|..-.  ..
T Consensus        92 n~l~alAp~f~~Ll~aR~~~g~a-~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F  170 (394)
T COG2814          92 NLLSALAPSFAVLLLARALAGLA-HGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATF  170 (394)
T ss_pred             HHHHHHhccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHH
Confidence            88888877666555555555444 4555565666666665 67899999999999999999999888777663210  00


Q ss_pred             HHhh-----hhhhhhhccC-----CCC-C-----------CCccc-----------------------------------
Q psy13668        318 ICNS-----VTYKMRTILS-----GPT-L-----------TSPFD-----------------------------------  340 (513)
Q Consensus       318 l~~~-----~~~~~~~~~~-----~~~-~-----------~~~~~-----------------------------------  340 (513)
                      +.-.     .--.+.+.+|     ++. .           +....                                   
T Consensus       171 ~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs  250 (394)
T COG2814         171 LAIAVLALLALLLLWKLLPPSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVS  250 (394)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccCCCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHH
Confidence            0000     0000001111     000 0           00000                                   


Q ss_pred             -----------------------------hhhcccchhhhhhhhccCCchhHHHHHHHhhhcccccccccccccccCCCC
Q psy13668        341 -----------------------------FSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP  391 (513)
Q Consensus       341 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (513)
                                                   .......+..++.+.+.+.+.........+..............-..+..|
T Consensus       251 ~~Ll~~Gv~~~~Gn~~gGrl~dr~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p  330 (394)
T COG2814         251 LVLLAFGIAGFIGNLLGGRLADRGPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAP  330 (394)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC
Confidence                                         001122233334444444344333333333222222222233333344667


Q ss_pred             CccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHhhcccc
Q psy13668        392 NYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGE  468 (513)
Q Consensus       392 ~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~  468 (513)
                      +.+..+.++++..-|+|...|..++|.++|..                  |+....++.+.+.+++.++.+...+.+
T Consensus       331 ~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~------------------g~~~~~~~~a~l~~~a~~~~~~~~~~~  389 (394)
T COG2814         331 DAADLAGSLNVAAFNLGIALGAALGGLVLDAL------------------GYAATGWVGAALLLLALLLALLSARKD  389 (394)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------------chHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999998873                  788999999999999998877655544

>PRK03699 putative transporter; Provisional

Probab=99.30  E-value=2.5e-11  Score=123.80  Aligned_cols=148  Identities=9%  Similarity=0.026  Sum_probs=107.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668        162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI  241 (513)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~  241 (513)
                      -++..++..++.......+...+|.+. +.+|+|..+.++..+...++..++.+..|++.||++||+....+.+...++.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~   86 (394)
T PRK03699          8 LTWISFLSYALTGALVIVTGMVMGPIA-EYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAV   86 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            345555566665555566666777765 5579999999999999999999999999999999999999888888777777


Q ss_pred             HHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        242 LAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ....+.++........+..+.+ .+...+.......+..| ++|+.+.+..+....+++.++|.+.+.+.+
T Consensus        87 ~l~~~~~~~~~~~~~~~l~G~~-~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~  156 (394)
T PRK03699         87 AGLMFSHSLALFSIAMFVLGVV-SGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA  156 (394)
T ss_pred             HHHHHcchHHHHHHHHHHHHHh-hHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            7766654333222222333322 33334444455556665 569999999988888999999999887764

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.30  E-value=2.8e-11  Score=123.45  Aligned_cols=132  Identities=11%  Similarity=0.013  Sum_probs=104.0

Q ss_pred             HHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHH
Q psy13668        178 FTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVS  257 (513)
Q Consensus       178 ~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  257 (513)
                      +.+...+|.. ++.+|.|..+.++..+.+.++..++.+..|++.||+|||++...+....+++.+...+.++.....+..
T Consensus        26 ~~~~~~lp~i-~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r  104 (393)
T PRK09705         26 TSVGPLLPQL-RQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSA  104 (393)
T ss_pred             hccchhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHH
Confidence            3444556665 456899999999999999999999999999999999999999999999999999998887665554444


Q ss_pred             HHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        258 FTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      +..+.+.. ...+.......+.+|++|+.++|........|..+++.+.+.+.+
T Consensus       105 ~l~Gig~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~  157 (393)
T PRK09705        105 LLGGVGIG-IIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQ  157 (393)
T ss_pred             HHHHhHHH-HHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44444433 333444455666678889999999998888888888888877654

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.29  E-value=5.5e-11  Score=116.39  Aligned_cols=287  Identities=15%  Similarity=0.060  Sum_probs=182.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG  240 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~  240 (513)
                      ++.+...++...+. ..+....-+...+++.+|+|..|.+++...+.+.+.+.++..|.+.||+|.|++...+.+...+-
T Consensus        14 ~~L~~S~~af~v~F-~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP   92 (417)
T COG2223          14 RNLWLSTLAFDVGF-MVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIP   92 (417)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHH
Confidence            44455555444443 33444444445566889999999999999999999999999999999999999999988887777


Q ss_pred             HHHHHhcCChh-HHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHH----HHHHHHhcc--c
Q psy13668        241 ILAASYSGCNR-LAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVS----PYLVGVLTP--N  312 (513)
Q Consensus       241 ~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~ig----p~l~g~l~~--~  312 (513)
                      ++.+.+....+ ...++.+.+..+..+..+.....+....+| +++|.+.|+.. .+|+|..+.    |.+......  .
T Consensus        93 ~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w  171 (417)
T COG2223          93 CLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAW  171 (417)
T ss_pred             HHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHH
Confidence            77766654433 245555556667777778777777777775 66999999988 777776554    444433331  0


Q ss_pred             hh--------------hhHHHhh-hhhhhhhccCCCC-------------CCC-ccc-----------------------
Q psy13668        313 WL--------------AKQICNS-VTYKMRTILSGPT-------------LTS-PFD-----------------------  340 (513)
Q Consensus       313 ~~--------------~~~l~~~-~~~~~~~~~~~~~-------------~~~-~~~-----------------------  340 (513)
                      ..              ..++..+ .++. |....+..             |.. ..+                       
T Consensus       172 ~~~~~i~~~~l~v~~v~~~~~~~d~p~~-r~~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg  250 (417)
T COG2223         172 RNVAGIYVVALAIAAVLAWLGMNDVPEH-RASVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFG  250 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCChhh-hccccccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            00              0000000 1111 11000000             000 000                       


Q ss_pred             -------------------------------------hhhcccchhhhhhhhccC------CchhHHHHHHHhhhccccc
Q psy13668        341 -------------------------------------FSASVGPGLGILAASYSG------CNRLAVTVSFTLGMGTMGA  377 (513)
Q Consensus       341 -------------------------------------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  377 (513)
                                                           .......+++.....+..      .+....+..+.....+.|.
T Consensus       251 ~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~  330 (417)
T COG2223         251 LSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGL  330 (417)
T ss_pred             CChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhcc
Confidence                                                 001233334444443332      1222333333333344455


Q ss_pred             ccccccccccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHH
Q psy13668        378 FLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLIT  457 (513)
Q Consensus       378 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~  457 (513)
                      ...+.......+.|++.|.+.|+...++.+|+..-|...|...+.+.                 ++...|+....+.+++
T Consensus       331 GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg-----------------~~~~~f~~~~~~~~~a  393 (417)
T COG2223         331 GNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG-----------------SYTGAFMLLLAFYLVA  393 (417)
T ss_pred             CcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcc-----------------cHHHHHHHHHHHHHHH
Confidence            55555555566778899999999999999999999999998887653                 5889999999999999


Q ss_pred             HHHHHhhccc
Q psy13668        458 NIIYCFMGSG  467 (513)
Q Consensus       458 ~~~~~~~~~~  467 (513)
                      .++.+...++
T Consensus       394 ~v~~~~~y~r  403 (417)
T COG2223         394 LVLTWALYAR  403 (417)
T ss_pred             HHHHHHHHHh
Confidence            9887765444

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.28  E-value=2.6e-11  Score=122.17  Aligned_cols=137  Identities=12%  Similarity=0.021  Sum_probs=97.8

Q ss_pred             HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh
Q psy13668        172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR  251 (513)
Q Consensus       172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~  251 (513)
                      +.....+.+....|.+ ++.+|.|..+.+...+...++..++.+..|+++||+|||+....+.+..+++.+.....++..
T Consensus        14 ~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~   92 (377)
T TIGR00890        14 FTSGYVYTWTLLAPPL-GRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLA   92 (377)
T ss_pred             HHhhHHhhhhhHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHH
Confidence            3333455555566554 556899999999999999999999999999999999999999988888888777666654433


Q ss_pred             HHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        252 LAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                      .........+.+ .+...+.......+..|++|+.+.++.+....++..+++.+.+.+.
T Consensus        93 ~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  150 (377)
T TIGR00890        93 ALYLTYGLASAG-VGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVI  150 (377)
T ss_pred             HHHHHHHHHhHH-HHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHH
Confidence            332222222222 2233333444555666888999999999998888877666665554

>PRK11043 putative transporter; Provisional

Probab=99.27  E-value=3e-10  Score=116.19  Aligned_cols=142  Identities=17%  Similarity=0.118  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHHhhHHHH--HHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc
Q psy13668        170 QIGHDFGLFTIVTDLPKY--MKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS  247 (513)
Q Consensus       170 ~~~~~~~~~~~~~~lp~~--l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~  247 (513)
                      .......+++...+.|.+  +++.+|.|..+.++..+...++..++++..|+++||++||+.+..+.+...++.+...+.
T Consensus        12 ~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~   91 (401)
T PRK11043         12 AGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV   91 (401)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh
Confidence            333444445555566655  567789999999999999999999999999999999999999988887777777666665


Q ss_pred             CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        248 GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      ++........+..+.+. +...+.......|..| ++++...+..+....++..++|.+.+.+.+.
T Consensus        92 ~~~~~l~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~  156 (401)
T PRK11043         92 ESAAQLLVLRFVQAVGV-CSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH  156 (401)
T ss_pred             cCHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            44333333233333322 2223334445555554 5588888888888889999999999887763

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.26  E-value=4.5e-09  Score=108.80  Aligned_cols=209  Identities=14%  Similarity=0.018  Sum_probs=142.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHH
Q psy13668         97 TSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFG  176 (513)
Q Consensus        97 r~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~  176 (513)
                      |..+.+.++.-++..+.+++++|++|..++..       +.  .+.....-++-...++++-+.|+.....++.++..-+
T Consensus       226 r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~-------~~--~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg  296 (477)
T PF11700_consen  226 RVAFLIVALWWLVFSIPLFLWLPDRPGPRPLP-------SG--SSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDG  296 (477)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC-------cc--hhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence            66666666666666777777777776522111       00  0000000000011235556678888888899999999


Q ss_pred             HHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCccc--chhhHhhHHHH-HHHHHHH-----h-c
Q psy13668        177 LFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTS--PFDFSASVGPG-LGILAAS-----Y-S  247 (513)
Q Consensus       177 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~--~~~~~~~~~~~-~~~~~l~-----~-~  247 (513)
                      ..++......|.++.+|++..+...+.....+.+++|.++.|++.||+|.|  +++....+... +++..+.     . .
T Consensus       297 ~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g  376 (477)
T PF11700_consen  297 VNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFG  376 (477)
T ss_pred             HHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccC
Confidence            999999999999999999999999999999999999999999999999988  66665554442 2332222     1 1


Q ss_pred             CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccchh
Q psy13668        248 GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPNWL  314 (513)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~  314 (513)
                      ..+.+....+-.+...+.+...+..-+...++.| ++.+.-.|+..+.+...+.+||.+.|.+.+..-
T Consensus       377 ~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg  444 (477)
T PF11700_consen  377 LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG  444 (477)
T ss_pred             cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            2222222222222233455555666666666665 569999999999999999999999999988654

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.26  E-value=1.9e-10  Score=116.53  Aligned_cols=128  Identities=15%  Similarity=0.077  Sum_probs=100.1

Q ss_pred             hhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy13668        182 TDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLG  261 (513)
Q Consensus       182 ~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  261 (513)
                      ...|. +++.+|.|..+.+++.+...++..++.+..|+++||+|||+....+.+...++.......++........+..+
T Consensus        15 ~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g   93 (399)
T TIGR00893        15 FAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLG   93 (399)
T ss_pred             HhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            33444 66778999999999999999999999999999999999999998888888877777766654333333333333


Q ss_pred             HHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        262 MGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .+ .+...+.......|..| ++|+.+.++.+...+++..++|.+.+.+.+
T Consensus        94 ~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~  143 (399)
T TIGR00893        94 AA-EAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI  143 (399)
T ss_pred             HH-HHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence            33 44455666677777775 679999999999999999999999987665

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.25  E-value=3e-11  Score=126.14  Aligned_cols=129  Identities=11%  Similarity=-0.058  Sum_probs=91.4

Q ss_pred             HHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc----CChhHHHH
Q psy13668        180 IVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS----GCNRLAVT  255 (513)
Q Consensus       180 ~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~  255 (513)
                      +....|.+ ++.+|.|..+.+++.+...++..++.+..|+++||+|+|+++..+.+..+++...+...    ..+....+
T Consensus        48 ~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  126 (467)
T PRK09556         48 FKAAQNDM-ISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMI  126 (467)
T ss_pred             hhhhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence            34446654 55689999999999999999999999999999999999999888877766665554432    22333222


Q ss_pred             HHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        256 VSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      ..-.+...+.+...+.......+..| ++||.+.|+.+...++|.++++.+...+
T Consensus       127 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~  181 (467)
T PRK09556        127 ALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG  181 (467)
T ss_pred             HHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH
Confidence            22222222233344555556666665 6799999999998888888887776544

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.24  E-value=1.7e-10  Score=117.66  Aligned_cols=150  Identities=11%  Similarity=-0.006  Sum_probs=98.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH-HHHHHHHhhhhhcCCCcccchhh-HhhHHH
Q psy13668        160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR-SVIVTYKMRTILSGPRLTSPFDF-SASVGP  237 (513)
Q Consensus       160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~~~~~-~~~~~~  237 (513)
                      |.+.+...+..++.......+...+|.|+++.+|.|..+.++..+...+ +...+.+.+++ .||++||+... .+.+..
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~   92 (393)
T PRK15011         14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLG   92 (393)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHH
Confidence            6677788888888888888888999999999999999999998765544 55566666666 99999988654 444444


Q ss_pred             HHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chh--HHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        238 GLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYA--GTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       238 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~--g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      +++.......+ +.+..+....+..+......+.......+..+ +.|  +...+..+...++|..++|.+.+.+.+
T Consensus        93 ~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~  168 (393)
T PRK15011         93 VLACTLFAWNR-NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM  168 (393)
T ss_pred             HHHHHHHHHhh-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            44444443332 22222111111122223334444444455443 323  445578888899999999999998876

>PRK10504 putative transporter; Provisional

Probab=99.24  E-value=1e-10  Score=122.30  Aligned_cols=150  Identities=18%  Similarity=0.131  Sum_probs=114.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG  240 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~  240 (513)
                      +.+|..++..++.....+.+..++|.+.++ +|.|..+.+...+...++..++.+..|+++||++||+....+.+...++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~   88 (471)
T PRK10504         10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG   88 (471)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence            457778888888888888888899999876 7999999999999999999999999999999999999988887777777


Q ss_pred             HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .+.....++........+..+.+ .+...+.......+..| ++++.+.|+.+...+++..++|.+.|.+.+.
T Consensus        89 ~~~~~~~~~~~~l~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~  160 (471)
T PRK10504         89 SLFCALSGTLNELLLARVLQGVG-GAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY  160 (471)
T ss_pred             HHHHHHhCCHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Confidence            66655544333222222222222 33344455555566665 6699999999999999999999999988763

>PRK09669 putative symporter YagG; Provisional

Probab=99.23  E-value=6.6e-10  Score=115.30  Aligned_cols=198  Identities=11%  Similarity=-0.094  Sum_probs=118.3

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668         95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD  174 (513)
Q Consensus        95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~  174 (513)
                      +|+..+.+.++++.+..+..++..+|++++.+ .       ++          ......++.+++|++++......++..
T Consensus       181 g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~-~-------~~----------~~~~~~~~~~~~n~~~~~l~~~~~~~~  242 (444)
T PRK09669        181 GYFYAMMVMGLLGVVLFFCCFFMTKERYTPEV-D-------NS----------SSVWKDLKLLLGNSQWRIMFIFNVVLL  242 (444)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCeEEecCCCC-c-------CC----------CCHHHHHHHHhCCchHHHHHHHHHHHH
Confidence            78888888777776665555444444321110 0       00          001123467889999888877766655


Q ss_pred             HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc-CChhHH
Q psy13668        175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS-GCNRLA  253 (513)
Q Consensus       175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~  253 (513)
                      ..........+.|.+...+ +....+.+.....+..+++.++.++++||+++|+....+..+..++...+... +.+.+.
T Consensus       243 ~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (444)
T PRK09669        243 TAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWL  321 (444)
T ss_pred             HHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHH
Confidence            5554444433333343333 23333445555667788899999999999999998887766555433333333 333332


Q ss_pred             HHHHHHHHHHHHhhhhhhHHHhhcccCc--------chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        254 VTVSFTLGMGTMGAFLPSLKVNALDLSP--------NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ..+...+.....+...+.......|..+        +..|...|..+....++.++++.+.|.+++
T Consensus       322 ~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~  387 (444)
T PRK09669        322 IFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA  387 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3332222223334444555555555542        346788899999999999999999988876

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.20  E-value=4e-09  Score=105.51  Aligned_cols=292  Identities=10%  Similarity=0.073  Sum_probs=181.3

Q ss_pred             hhhhhhhhh-hhh---hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH--HH-------------HH
Q psy13668          9 VMLHRLVNE-QQS---NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF--AL-------------WM   69 (513)
Q Consensus         9 ~~~~~~~~~-r~~---~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~--~~-------------~~   69 (513)
                      +..+-|-.+ ++.   -.|+..+..++...+.+|+.|.+.||.+-.|...+....+.+..+  +.             +.
T Consensus        28 pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~  107 (412)
T PF01306_consen   28 PFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGA  107 (412)
T ss_dssp             HHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHH
T ss_pred             HHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555533 332   278899999999999999999999999435555554433322111  00             00


Q ss_pred             HH---------Hhhh-------------------------hhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Q psy13668         70 TF---------ATGA-------------------------QIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWM  115 (513)
Q Consensus        70 ~~---------~~~~-------------------------~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~  115 (513)
                      +.         .++.                         ++|.+++..++|.+...  +=+..|++....+++..++..
T Consensus       108 iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i--~p~~~fwi~s~~~~il~lll~  185 (412)
T PF01306_consen  108 IIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNI--NPNIIFWIASAAAIILLLLLL  185 (412)
T ss_dssp             HHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeee--CccHHHHHHHHHHHHHHHHHH
Confidence            00         0000                         36778888888887764  335667765555544444333


Q ss_pred             HhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC--
Q psy13668        116 TFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH--  193 (513)
Q Consensus       116 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g--  193 (513)
                      +..++.+++.+..       +.++.    ++++.......+++|+|++|...+......+.++.+-...|.|+++.+.  
T Consensus       186 ~~~~~~~~~~~~~-------~~~~~----~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~  254 (412)
T PF01306_consen  186 LLKPDVPPQAEVA-------DALGA----KKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSA  254 (412)
T ss_dssp             SS---SSSSS-SS-------TTSSS----------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSH
T ss_pred             HcCCcCchhhhhh-------ccccc----CCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            3333333222111       10000    0000001123678999999999998888888888888889999886543  


Q ss_pred             -cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhH
Q psy13668        194 -FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSL  272 (513)
Q Consensus       194 -~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (513)
                       .+....|.+.+...+.-.+......++.+|+|.|+.+.++..++++=.+.....++......+=+..+.-+.....+.+
T Consensus       255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f  334 (412)
T PF01306_consen  255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF  334 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence             3445678888888888899999999999999999999988888877777777777766555554444444444444444


Q ss_pred             HHhhcccCcchhHHHHHHH-HHHHhHHhhHHHHHHHHhccch
Q psy13668        273 KVNALDLSPNYAGTLMALV-GGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       273 ~~~~~~~~p~~~g~~~gi~-~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      --......++..++...+. +...+++..+.+.+.|.+.|+.
T Consensus       335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~  376 (412)
T PF01306_consen  335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI  376 (412)
T ss_dssp             HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc
Confidence            3344444456688888885 5677888889988887777654

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.20  E-value=5.9e-11  Score=116.04  Aligned_cols=180  Identities=16%  Similarity=0.139  Sum_probs=126.9

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHh
Q psy13668        167 IIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASY  246 (513)
Q Consensus       167 ~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~  246 (513)
                      ++.+...+..--.+..-.|... +..++|..|.|.+.+...+.-.++..+.|.++||.+.|+.+..+++..+++.+++.+
T Consensus        35 fiGYa~fYl~RknF~~a~p~l~-e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gf  113 (448)
T COG2271          35 FIGYAAFYLTRKNFNLAMPALI-EDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGF  113 (448)
T ss_pred             HHHHHHHHHHHHhHhhccHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhh
Confidence            3333333333334555565555 456899999999999999999999999999999999999988888777776666554


Q ss_pred             cCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccchhhhHHHhhhhhhh
Q psy13668        247 SGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKM  326 (513)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~~~~l~~~~~~~~  326 (513)
                      .++-..                                                                          
T Consensus       114 s~s~~~--------------------------------------------------------------------------  119 (448)
T COG2271         114 SPSLFL--------------------------------------------------------------------------  119 (448)
T ss_pred             hhHHHH--------------------------------------------------------------------------
Confidence            431100                                                                          


Q ss_pred             hhccCCCCCCCccchhhcccchhhhhhhhccCCchhHHHHHHHhhhcccccccc-cccccccCCCCCccchhhhhhhhhh
Q psy13668        327 RTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLP-SLKVNALDLSPNYAGTLMALVGGIG  405 (513)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~  405 (513)
                                                           ..++..+..-+.|...| .........+++.||+..++.|+..
T Consensus       120 -------------------------------------~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~sh  162 (448)
T COG2271         120 -------------------------------------FAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSH  162 (448)
T ss_pred             -------------------------------------HHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhh
Confidence                                                 00111111111121122 2233334578899999999999999


Q ss_pred             hccccccccee--eeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHhhccccccccCCcc
Q psy13668        406 ALSGTVSPYLV--GVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGEIQEWNEPL  476 (513)
Q Consensus       406 ~~~~~~~p~~~--g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~  476 (513)
                      ++|+.+.|.++  +.+.+..                  +||..|++.++++++..++.++..|+++++...++
T Consensus       163 NiGGal~~~~~~la~~~~~~------------------~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~  217 (448)
T COG2271         163 NIGGALAPLVALLAFFAFHG------------------GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP  217 (448)
T ss_pred             hcccchHHHHHHHHHHHhcc------------------chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC
Confidence            99999999999  7775543                  79999999999999888888888888877665444

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.19  E-value=4.6e-10  Score=114.45  Aligned_cols=147  Identities=16%  Similarity=0.024  Sum_probs=109.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668        160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL  239 (513)
Q Consensus       160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~  239 (513)
                      +++++..++..++...+........+.+.+ .++.+..+.+++.....+...+..++.|+++||++||+++..+.++.++
T Consensus         2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~   80 (393)
T PRK11195          2 SKGFYAIMAAQFFSALADNALLFAAIALLK-ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLL   80 (393)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHH
Confidence            356677777777766665555566666654 5688888999999999999999999999999999999999988887776


Q ss_pred             HHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        240 GILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      +.+.+....+.   ....+ +.....+...|.......|..| ++|+++.|+.+....++..+||.+.|.+.+
T Consensus        81 ~~~~~~~~~~~---~~~r~-l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~  149 (393)
T PRK11195         81 GCLLMLFGIHP---LLAYG-LVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD  149 (393)
T ss_pred             HHHHHHHHHHH---HHHHH-HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            65554332221   11122 2223345566666777777775 679999999999999999999999998876

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.18  E-value=1.7e-09  Score=113.00  Aligned_cols=156  Identities=12%  Similarity=0.011  Sum_probs=102.0

Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668        155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS  234 (513)
Q Consensus       155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~  234 (513)
                      +.+++|++++...+..++.....+......+.|.+...+ +....+.+.....+..+++.++.++++||+|+|+....+.
T Consensus       225 ~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~  303 (473)
T PRK10429        225 ALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGAS  303 (473)
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence            456789888888887777777666666666655554433 4555566666667888999999999999999999987777


Q ss_pred             HHHHHHHHHHHh---cC-ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC--------cchhHHHHHHHHHHHhHHhhHH
Q psy13668        235 VGPGLGILAASY---SG-CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS--------PNYAGTLMALVGGIGALSGTVS  302 (513)
Q Consensus       235 ~~~~~~~~~l~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------p~~~g~~~gi~~~~~~i~~~ig  302 (513)
                      .+..++.+.+..   .. .+.+..++...+.....+.......+...|..        .+..|...|..+....++.+++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~  383 (473)
T PRK10429        304 IFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFA  383 (473)
T ss_pred             HHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHH
Confidence            665544444332   22 22222222222222223333344444444442        2447779999999999999999


Q ss_pred             HHHHHHhcc
Q psy13668        303 PYLVGVLTP  311 (513)
Q Consensus       303 p~l~g~l~~  311 (513)
                      +.+.|.+++
T Consensus       384 ~~i~g~~l~  392 (473)
T PRK10429        384 AFFIGVVLG  392 (473)
T ss_pred             HHHHHHHHH
Confidence            999988775

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.18  E-value=3.6e-10  Score=113.91  Aligned_cols=133  Identities=9%  Similarity=-0.052  Sum_probs=89.0

Q ss_pred             HHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHH
Q psy13668        177 LFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTV  256 (513)
Q Consensus       177 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  256 (513)
                      +..+...+|.+. +.+|.|..+.+++.+...++..++.+..|+++||+|||++..........+.......++-....+.
T Consensus         7 ~~~~~~~lp~i~-~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   85 (368)
T TIGR00903         7 WVTFSPVLSLVA-EDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLAC   85 (368)
T ss_pred             HHHHHhhHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence            344445566664 4579999999999999999999999999999999998887655444333332222221222222333


Q ss_pred             HHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        257 SFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      -+..+.+.. ...+.........++++|+++.++.+....+|..+++.+.+.+.+
T Consensus        86 R~l~G~g~~-~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~  139 (368)
T TIGR00903        86 QLLAALGQP-FLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT  139 (368)
T ss_pred             HHHHHhHhH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333333322 223333333444556889999999999999999999988888765

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.17  E-value=2.9e-09  Score=112.05  Aligned_cols=99  Identities=16%  Similarity=0.194  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH------HHHH------------------HH----HHHH--
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG------LAWF------------------AL----WMTF--   71 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~------~~~~------------------~~----~~~~--   71 (513)
                      .+...+.+.++.++..++.|++.|++ |+|+++.+...+.      +...                  ..    ....  
T Consensus        43 ~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~  121 (495)
T PRK14995         43 LLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRA  121 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56777888999999999999999999 9998876422111      1100                  00    0000  


Q ss_pred             ---------------HhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCC
Q psy13668         72 ---------------ATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDP  122 (513)
Q Consensus        72 ---------------~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p  122 (513)
                                     .....+|..++|.+++.+.+.. |||+.|++...++++..++..+++|++|
T Consensus       122 ~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~-gwr~~f~i~~~~~~~~~~l~~~~l~~~~  186 (495)
T PRK14995        122 TFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF-YWGSVFLINVPIVLVVMGLTARYVPRQA  186 (495)
T ss_pred             HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence                           0011356788899999999888 9999999877766666555555666543

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.17  E-value=2.6e-10  Score=116.50  Aligned_cols=151  Identities=12%  Similarity=0.007  Sum_probs=102.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668        160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL  239 (513)
Q Consensus       160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~  239 (513)
                      ||.+|......++...++..+..++|.|+++.+|+|..+.++..+...+...++++..|+++||+|||+.........++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~   80 (396)
T TIGR00882         1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLV   80 (396)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence            57889998899999999999999999999999999999999999999999999999999999999999998776555444


Q ss_pred             HHHHHH---hcCC---hhHHHHHHHHHHHH-HHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        240 GILAAS---YSGC---NRLAVTVSFTLGMG-TMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       240 ~~~~l~---~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      +.....   ..+.   ..........+..+ ..+...+.......+.. ++++...|.....+++|..++|.+.|.+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~  158 (396)
T TIGR00882        81 LFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS-RNSNFEYGKARMFGCVGWALCASIAGILFS  158 (396)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh-hhcccccchhhhhcccHHHHHHHHHhhhhc
Confidence            332221   1110   01111111111111 12222233333333332 234456677777788888888888887654

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.17  E-value=1.3e-09  Score=111.77  Aligned_cols=132  Identities=13%  Similarity=-0.028  Sum_probs=94.0

Q ss_pred             HHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHH
Q psy13668        178 FTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVS  257 (513)
Q Consensus       178 ~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  257 (513)
                      ..+...+|.+. +.+|.|..+.+...+...++..++.+..|+++||++||++...+.....++.+.....++........
T Consensus        30 ~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~  108 (406)
T PRK15402         30 DMIQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLR  108 (406)
T ss_pred             hhHhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence            33444555544 56799999999999999999999999999999999999999888887777777666654433322222


Q ss_pred             HHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        258 FTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      +..+.+ .+...+.......|..| ++++.+.++.+....++..++|.+.+.+.+
T Consensus       109 ~l~G~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~  162 (406)
T PRK15402        109 FLQGIG-LCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH  162 (406)
T ss_pred             HHHHhH-hhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222222 22333344455555554 568888888888888888999998887765

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.17  E-value=3.5e-08  Score=100.18  Aligned_cols=161  Identities=12%  Similarity=0.053  Sum_probs=118.3

Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668        155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS  234 (513)
Q Consensus       155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~  234 (513)
                      .+++|+|++....+..++.....-...++.+.|++|.-+++....+.+.+...++-++.-...+++..|++.|+++..+.
T Consensus       201 ~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~  280 (400)
T PF03825_consen  201 LKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLAL  280 (400)
T ss_pred             HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            57899999998888888888888888889999999875588888888777777788888889999999999999988888


Q ss_pred             HHHHHHHHHHHhcCChhHHHHHHH-----HHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHH-HhHHhhHHHHHHH
Q psy13668        235 VGPGLGILAASYSGCNRLAVTVSF-----TLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGI-GALSGTVSPYLVG  307 (513)
Q Consensus       235 ~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~-~~i~~~igp~l~g  307 (513)
                      +..++=..+..+..++.+......     ..+..+. ...........+.. ++.|+++-++.+.. ..+|..+|..+.|
T Consensus       281 ~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~-~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG  359 (400)
T PF03825_consen  281 VAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFG-LFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGG  359 (400)
T ss_pred             HHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHH-HHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            877776666666633332222111     2233333 33333444445555 46699999998875 5799999999999


Q ss_pred             Hhccchhhh
Q psy13668        308 VLTPNWLAK  316 (513)
Q Consensus       308 ~l~~~~~~~  316 (513)
                      .+.|....+
T Consensus       360 ~l~~~~g~~  368 (400)
T PF03825_consen  360 WLYDAFGAR  368 (400)
T ss_pred             HHHHHhcch
Confidence            998865443

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.16  E-value=1.3e-09  Score=111.23  Aligned_cols=138  Identities=14%  Similarity=0.030  Sum_probs=103.8

Q ss_pred             HHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhH
Q psy13668        173 HDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRL  252 (513)
Q Consensus       173 ~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  252 (513)
                      .....|.....+|.+.+ .+|.++.+.++..+...++..++++..|.+.||+|||+....+.+..+++.+.....++-..
T Consensus        32 ~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~  110 (394)
T PRK10213         32 LIIVEFLPVSLLTPMAQ-DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSL  110 (394)
T ss_pred             HHHHHHHHHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHH
Confidence            33344455556776654 57999999999999999999999999999999999999999999888887777666533333


Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        253 AVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .....+..+.+ .+...+.......|..| ++|+.+.++.....+++..++|.+.+.+.+.
T Consensus       111 l~~~r~l~G~~-~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~  170 (394)
T PRK10213        111 LLIGRACLGLA-LGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL  170 (394)
T ss_pred             HHHHHHHHHHh-hHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            33333333333 33345555666667774 6799999999999999999999999988763

>KOG3764|consensus

Probab=99.16  E-value=3.5e-10  Score=109.47  Aligned_cols=278  Identities=15%  Similarity=0.079  Sum_probs=187.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHH--------H---------------------
Q psy13668         19 QSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALW--------M---------------------   69 (513)
Q Consensus        19 ~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~--------~---------------------   69 (513)
                      ...+|+.++...+-+.+..++.|.++||. |.|-.+.+--.+.+.-.+++        .                     
T Consensus       105 ~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglam  183 (464)
T KOG3764|consen  105 NTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAM  183 (464)
T ss_pred             ccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHH
Confidence            34488999999999999999999999999 98888764222221111110        0                     


Q ss_pred             ----------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccc
Q psy13668         70 ----------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT  133 (513)
Q Consensus        70 ----------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  133 (513)
                                      .......+|-+++|+.++.+.+.. |-+.+|.+.++++++-..+.++.++....+         
T Consensus       184 lAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~---------  253 (464)
T KOG3764|consen  184 LADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPFLVLAIVLLLDGALQLLVIEPTEMD---------  253 (464)
T ss_pred             HHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcHHHHHHHHHHHHHHHHheeCccccC---------
Confidence                            111111355667788888888887 999999999999988777776665432111         


Q ss_pred             cccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHH
Q psy13668        134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVT  213 (513)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig  213 (513)
                        +         +.+.+..++++++++|.++........++...-....-++.|..|....+..+.|+...+..+...+|
T Consensus       254 --~---------~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig  322 (464)
T KOG3764|consen  254 --P---------DSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIG  322 (464)
T ss_pred             --c---------cccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhcc
Confidence              0         01112345688999999998888877777777777778899999988866669999999999999999


Q ss_pred             HHhhhhhcCCCcccchh--hHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHH--HhhhhhhHHHhhcccC-cc---hhH
Q psy13668        214 YKMRTILSGPRLTSPFD--FSASVGPGLGILAASYSGCNRLAVTVSFTLGMGT--MGAFLPSLKVNALDLS-PN---YAG  285 (513)
Q Consensus       214 ~~~~g~l~dr~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-p~---~~g  285 (513)
                      ..+.|.++||++..++.  +.+.+...+++....+.+.-....+..+.++++.  .............|.- .+   .-|
T Consensus       323 ~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYG  402 (464)
T KOG3764|consen  323 TNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYG  402 (464)
T ss_pred             CchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceee
Confidence            99999999999954443  3344444444444444443333222222222222  1222222222222222 22   479


Q ss_pred             HHHHHHHHHHhHHhhHHHHHHHHhccchhhhHH
Q psy13668        286 TLMALVGGIGALSGTVSPYLVGVLTPNWLAKQI  318 (513)
Q Consensus       286 ~~~gi~~~~~~i~~~igp~l~g~l~~~~~~~~l  318 (513)
                      .++++......++.++||.+.|.+.+..--+++
T Consensus       403 sVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl  435 (464)
T KOG3764|consen  403 SVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWL  435 (464)
T ss_pred             eHHHHHHHHHHHhhhccccccchheeehhHHHH
Confidence            999999999999999999999999987655555

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.14  E-value=5.4e-10  Score=120.94  Aligned_cols=124  Identities=10%  Similarity=0.044  Sum_probs=93.5

Q ss_pred             HhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHH
Q psy13668        181 VTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTL  260 (513)
Q Consensus       181 ~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  260 (513)
                      ...+|. +++.++++..+.+++.+...++.+++.+++|+++||+|||+.+..+.++.+++.++..+.++.....+..++.
T Consensus       187 s~ilp~-i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~  265 (742)
T TIGR01299       187 GFVLPS-AEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLS  265 (742)
T ss_pred             HHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            334444 4556799999999999999999999999999999999999999988887777777766654433333333333


Q ss_pred             HHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668        261 GMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLV  306 (513)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~  306 (513)
                      +++ .+...+.......+..| +.||...++.++...+|.++++.+.
T Consensus       266 G~g-~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la  311 (742)
T TIGR01299       266 GFG-IGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMA  311 (742)
T ss_pred             HHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333 34445677777777776 6699999999998888888877654

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.13  E-value=3.5e-09  Score=108.71  Aligned_cols=145  Identities=16%  Similarity=0.038  Sum_probs=108.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHH
Q psy13668        164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILA  243 (513)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  243 (513)
                      ...++.+++.+.-...+....| .+++.+|.|..+.++..+...++..++.+..|+++||+|||+.+..+.++..++...
T Consensus        11 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~   89 (412)
T TIGR02332        11 IFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTA   89 (412)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence            3344444444444444555555 677889999999999999999999999999999999999999999888888888888


Q ss_pred             HHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       244 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                      ..+.++.......-+..+.+.. ...+.......+..| ++||.+.|+.+....+|..++|.+.+.+.
T Consensus        90 ~~~~~~~~~l~~~r~l~G~~~~-~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~  156 (412)
T TIGR02332        90 TMFATGPESLYLLRILVGIAEA-GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL  156 (412)
T ss_pred             HHHhcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7776554444444444444333 334555556677765 67999999999999999999999988775

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.13  E-value=1.2e-09  Score=112.74  Aligned_cols=147  Identities=12%  Similarity=0.092  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL  242 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  242 (513)
                      +....+..+......+......|. +++.+|.|..+.++..+...++..++.+..|+++||+|||+....+.+..+++..
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~   98 (426)
T PRK12307         20 LFSAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTG   98 (426)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence            344445555444444454445554 5566899999999999999999999999999999999999999999888888877


Q ss_pred             HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .....++.....+..+..+.+ .+...+.......|..| ++|+++.++.+....+|..++|.+.+.+.+
T Consensus        99 ~~~~~~~~~~l~~~r~l~G~g-~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~  167 (426)
T PRK12307         99 LSGLASGVIMLTLSRFIVGMG-MAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE  167 (426)
T ss_pred             HHHHHhHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence            766655433333333333333 23344445555566664 669999999999999999999988776655

>KOG0253|consensus

Probab=99.12  E-value=3.5e-09  Score=101.43  Aligned_cols=280  Identities=11%  Similarity=0.072  Sum_probs=164.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH----------------HH-----------------
Q psy13668         23 VILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL----------------WM-----------------   69 (513)
Q Consensus        23 ~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~----------------~~-----------------   69 (513)
                      ++....-..|..++...-|.++|+. |+|+.|-+.....+...++                |.                 
T Consensus       116 ~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~l  194 (528)
T KOG0253|consen  116 PLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFL  194 (528)
T ss_pred             hHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhc
Confidence            3444555667777777889999999 9998887544433333211                00                 


Q ss_pred             ---------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc-----c--ch-----
Q psy13668         70 ---------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES-----T--HY-----  128 (513)
Q Consensus        70 ---------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~-----~--~~-----  128 (513)
                               .......+|.+....+.-..+... ||||.....+.+..+.+. ..++++|+|.-.     +  ..     
T Consensus       195 p~~~r~~~~V~~~~waig~v~ea~law~vm~~~-gwr~~l~~~~~pl~~~a~-f~~w~~ESpRf~~~~G~~~kAletL~k  272 (528)
T KOG0253|consen  195 PSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNF-GWRYLLFTSSTPLMFAAR-FLVWVYESPRFYLAKGDDYKALETLHK  272 (528)
T ss_pred             cCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHhHHHHHHH-HHhhcccCcchhhhcCChHHHHHHHHH
Confidence                     001111355666666666666777 999988877755544443 344667776321     0  00     


Q ss_pred             --hcccccc-------------cccchhhhhc---cCCCCCCchhhhcc---chhHHHHHHHHHHHHHHHHHHHhhHHHH
Q psy13668        129 --VAYGTAV-------------MHKSNRFIFS---FQNLPPTPWGKIAT---SAPVIGLIIAQIGHDFGLFTIVTDLPKY  187 (513)
Q Consensus       129 --~~~~~~~-------------~~~~~~~~~~---~~~~~~~~~~~~l~---~~~~~~~~l~~~~~~~~~~~~~~~lp~~  187 (513)
                        .-+|-..             .+++.+.++.   ..+........++.   .+....++...|.....+|+.......+
T Consensus       273 iArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttel  352 (528)
T KOG0253|consen  273 IARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTEL  352 (528)
T ss_pred             HHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence              0000000             0000000000   00111222333433   1344566666677777777766555444


Q ss_pred             HHHhc-----------------C--cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC
Q psy13668        188 MKDVL-----------------H--FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG  248 (513)
Q Consensus       188 l~~~~-----------------g--~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~  248 (513)
                      ++...                 +  ++...--.=..+..+....|.++.+++.||+|||+.+...++...++++++....
T Consensus       353 fqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~  432 (528)
T KOG0253|consen  353 FQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK  432 (528)
T ss_pred             HhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc
Confidence            44321                 0  1111111123345677789999999999999999999999999999988887765


Q ss_pred             ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcch-hHHHHHHHHHHHhHHhhHHHHHH
Q psy13668        249 CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNY-AGTLMALVGGIGALSGTVSPYLV  306 (513)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~gi~~~~~~i~~~igp~l~  306 (513)
                      +......+++. +-.+....+...+....|++|.. |+++.|....++.+|+++.|.+.
T Consensus       433 ~rn~~tvllf~-arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA  490 (528)
T KOG0253|consen  433 TRNAYTVLLFT-ARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA  490 (528)
T ss_pred             CcchhHHHHHH-HHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence            54433333322 23334455556677888888864 99999999999999999999887

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.12  E-value=3.5e-10  Score=118.02  Aligned_cols=88  Identities=16%  Similarity=0.115  Sum_probs=74.0

Q ss_pred             ccc-hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHh--cCcchhhhhHHhchhHHHHHHHHHhhhhhcCC-CcccchhhHh
Q psy13668        158 ATS-APVIGLIIAQIGHDFGLFTIVTDLPKYMKDV--LHFSITSVDLISGWPNRSVIVTYKMRTILSGP-RLTSPFDFSA  233 (513)
Q Consensus       158 l~~-~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~  233 (513)
                      +++ +.++.+.+..++...++|+...++|.|+++.  +|++..+++.+.....+...++++.+|+++|| +|||+.+..+
T Consensus         6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~   85 (475)
T TIGR00924         6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG   85 (475)
T ss_pred             cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence            444 3466777777787899999999999999987  89999999999999999999999999999999 8999998887


Q ss_pred             hHHHHHHHHHHH
Q psy13668        234 SVGPGLGILAAS  245 (513)
Q Consensus       234 ~~~~~~~~~~l~  245 (513)
                      .++.+++.+++.
T Consensus        86 ~~~~~~g~~~~~   97 (475)
T TIGR00924        86 GIVLMLGHFMLA   97 (475)
T ss_pred             HHHHHHHHHHHH
Confidence            766655554443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>KOG4686|consensus

Probab=99.12  E-value=4.8e-10  Score=103.38  Aligned_cols=73  Identities=15%  Similarity=0.028  Sum_probs=68.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH
Q psy13668        160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS  232 (513)
Q Consensus       160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~  232 (513)
                      .+++|...+.+++.+.+.+-+.+..|.++++++|+|+..++.+.+.......+.+++.|.++||.|++.+.+.
T Consensus       263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~  335 (459)
T KOG4686|consen  263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVA  335 (459)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHH
Confidence            3899999999999999999999999999999999999999999999999999999999999999999877554

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.11  E-value=2.9e-10  Score=114.13  Aligned_cols=145  Identities=17%  Similarity=0.083  Sum_probs=107.4

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHH
Q psy13668        166 LIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAAS  245 (513)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~  245 (513)
                      .....++...........+|.|..+ .+.+..+.+++.+...++..++.+..|+++||+|||+....+.+...++.....
T Consensus         4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~   82 (365)
T TIGR00900         4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP   82 (365)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence            3445555555556666677888776 589999999999999999999999999999999999998888777666655544


Q ss_pred             hcC----ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        246 YSG----CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       246 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ...    .+.+.......+.....+...+.......|..| ++|+.+.++.+....++..++|.+.+.+.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~  153 (365)
T TIGR00900        83 FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA  153 (365)
T ss_pred             HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            433    123333222222233344555666677777775 679999999999999999999999988765

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.11  E-value=2.5e-09  Score=108.42  Aligned_cols=138  Identities=14%  Similarity=0.058  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh
Q psy13668        172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR  251 (513)
Q Consensus       172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~  251 (513)
                      .............|.+ ++.+|.|..+.++..+...++..++.+..|++.||++||+....+.+...++.+.....++..
T Consensus        16 ~~~~~~~~~~~~~p~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~   94 (385)
T TIGR00710        16 LGPLGIDMYLPAFPEI-AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIE   94 (385)
T ss_pred             HHHHHHHHhcccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH
Confidence            3334444445556655 455799999999999999999999999999999999999999988888887777776655433


Q ss_pred             HHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        252 LAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ......+..+. ..+...+.......|..| ++|+++.++.+....++..++|.+.+.+.+
T Consensus        95 ~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~  154 (385)
T TIGR00710        95 TLLVLRFVQAF-GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV  154 (385)
T ss_pred             HHHHHHHHHHc-chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33322222222 233444555566667665 679999999999999999999999988765

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.10  E-value=4.2e-09  Score=108.90  Aligned_cols=86  Identities=15%  Similarity=0.132  Sum_probs=69.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL  242 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  242 (513)
                      ++...+..++.+...+.+..++|.+.++ +|+|..+.+++.+...++..++++..|++.||+|||+.+..+.+..+++.+
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~  103 (434)
T PRK11663         25 LITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINI  103 (434)
T ss_pred             HHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHH
Confidence            3344455555555555667788888765 799999999999999999999999999999999999999888888888877


Q ss_pred             HHHhcCC
Q psy13668        243 AASYSGC  249 (513)
Q Consensus       243 ~l~~~~~  249 (513)
                      +....++
T Consensus       104 ~~~~~~~  110 (434)
T PRK11663        104 LFGFSSS  110 (434)
T ss_pred             HHHHHhH
Confidence            7666543

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.10  E-value=1.4e-09  Score=111.00  Aligned_cols=147  Identities=12%  Similarity=0.062  Sum_probs=108.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL  242 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  242 (513)
                      +...++..+......+......|.+ ++.+|+|..+.+++.+...++..++.+..|+++||+|||+....+.+..+++.+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~   92 (405)
T TIGR00891        14 FSAAWLGWLLDAFDFFLVALVLAEV-AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTL   92 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence            3445555555555555666666654 566899999999999999999999999999999999999999888888777777


Q ss_pred             HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ...+.++........+..+.+ .+...+.......|.. +++|+.+.++.+....+|..++|.+.+.+.+
T Consensus        93 ~~~~~~~~~~l~~~~~l~G~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~  161 (405)
T TIGR00891        93 ACGFAPGYITMFIARLVIGIG-MGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP  161 (405)
T ss_pred             HHHHhccHHHHHHHHHHHHhh-hhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            766655433333333333333 3344444555555665 4679999999999999999999998887654

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.10  E-value=1.5e-07  Score=98.38  Aligned_cols=279  Identities=12%  Similarity=0.014  Sum_probs=150.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh-ccCchHHHHHHHHHHHH------HH-----HHHH--------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRY-LGGWTSVFYVFGAVGLA------WF-----ALWM--------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~-~~gwr~if~~~g~~~~~------~~-----~~~~--------------------   69 (513)
                      .+...+.+.++..++++++|+++|| + |.|.+..+...+..+      ..     +...                    
T Consensus        50 ag~~~~~~~~~~~~~~~~~G~laDr~~-G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a  128 (475)
T TIGR00924        50 AFIIFGAYSALVYLLTSVGWWFGDRVW-GTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVG  128 (475)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHhhc-chHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHH
Confidence            6677888889999999999999999 7 887765532211110      00     0000                    


Q ss_pred             ----------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhcc----CCCCCccchh
Q psy13668         70 ----------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFAS----SDPSESTHYV  129 (513)
Q Consensus        70 ----------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~----~~p~~~~~~~  129 (513)
                                      +......+|.++++++++.+.+.. |||+.|.+.++..++.. +.+++.+    +.|++.+.. 
T Consensus       129 ~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~-g~~~~f~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~-  205 (475)
T TIGR00924       129 KLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY-GYHVGFNLAAVGMVIGL-LTFFAGRHMLRDIGSVPDPL-  205 (475)
T ss_pred             HhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHH-HHHHHcccccccCCCCCCCc-
Confidence                            000111377888999999988887 99999998775444333 3332322    111111101 


Q ss_pred             cccccccccchhhhh------------------ccC-----------------------CCCCCchhhhccchhHHHHHH
Q psy13668        130 AYGTAVMHKSNRFIF------------------SFQ-----------------------NLPPTPWGKIATSAPVIGLII  168 (513)
Q Consensus       130 ~~~~~~~~~~~~~~~------------------~~~-----------------------~~~~~~~~~~l~~~~~~~~~l  168 (513)
                            ++++++...                  ..+                       ..++....+-.|...+...++
T Consensus       206 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  279 (475)
T TIGR00924       206 ------SGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFL  279 (475)
T ss_pred             ------chhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHH
Confidence                  111000000                  000                       000000000011123333344


Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHhcCcchhh----hhHHhchhHHHHHHHHHhhh----hhcCC-Ccccchh--hHhhHHH
Q psy13668        169 AQIGHDFGLFTIVTDLPKYMKDVLHFSITS----VDLISGWPNRSVIVTYKMRT----ILSGP-RLTSPFD--FSASVGP  237 (513)
Q Consensus       169 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~----~~~~~~~~~~~~~ig~~~~g----~l~dr-~~~~~~~--~~~~~~~  237 (513)
                      ...+....+.-..+.++.+.++..+.+...    .+.+.+...+..++..+...    ++.|| .+.+...  ..+++..
T Consensus       280 ~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~  359 (475)
T TIGR00924       280 EAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFC  359 (475)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHH
Confidence            344444444445555677776654443222    55677777776666666544    45555 2223332  5566666


Q ss_pred             HHHHHHHHhc--------CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc-hhHHHHHHHHHHHhHHhhHHHHHHHH
Q psy13668        238 GLGILAASYS--------GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN-YAGTLMALVGGIGALSGTVSPYLVGV  308 (513)
Q Consensus       238 ~~~~~~l~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~gi~~~~~~i~~~igp~l~g~  308 (513)
                      +++...+...        ..+.++.+....+....-....|.......+..|+ .||+..|+......+|..+++.+...
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~  439 (475)
T TIGR00924       360 GASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATF  439 (475)
T ss_pred             HHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6665554421        23344444444443444456666677777777764 69999999999999999998888765


Q ss_pred             hc
Q psy13668        309 LT  310 (513)
Q Consensus       309 l~  310 (513)
                      ..
T Consensus       440 ~~  441 (475)
T TIGR00924       440 GA  441 (475)
T ss_pred             Hh
Confidence            54

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.08  E-value=6.3e-09  Score=106.13  Aligned_cols=146  Identities=16%  Similarity=0.050  Sum_probs=101.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHH
Q psy13668        164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILA  243 (513)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  243 (513)
                      +......++...........+|.+. +.+|.|..+.++..+...++..++.+..|+++||++||+....+.+...++.+.
T Consensus        11 ~~~~~~~~~~~~~~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~   89 (394)
T PRK11652         11 FMLVLLVAVGQMAQTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLV   89 (394)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH
Confidence            3344444444444444555566665 457999999999999999999999999999999999999988888877777776


Q ss_pred             HHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       244 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ....++.....+..+..+.+. +...+.......|.. +++++.+.+..+....++..++|.+.+.+.+
T Consensus        90 ~~~~~~~~~l~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~  157 (394)
T PRK11652         90 ALFAHSLTVLIAASAIQGLGT-GVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT  157 (394)
T ss_pred             HHHHccHHHHHHHHHHHHhhh-hHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            665544333333323333222 222333334445555 4679999999999999999999999888765

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.08  E-value=3.5e-08  Score=97.02  Aligned_cols=161  Identities=17%  Similarity=0.089  Sum_probs=123.7

Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668        154 WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA  233 (513)
Q Consensus       154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~  233 (513)
                      ++++.+++++....++.++..-+..++......|-.+.+|++..+..++.....+..++|+++.|++.||++.|+++..+
T Consensus       245 ~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~  324 (438)
T COG2270         245 FKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIG  324 (438)
T ss_pred             HHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHH
Confidence            46677778888888888888888899999999999989999999999999999999999999999999999999998888


Q ss_pred             hHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhccc-CcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        234 SVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDL-SPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       234 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .+...+..+...+........+..+.++.. .+...+..-+...+. +|++.+...|+.+..+...+..||.+.+.+.+.
T Consensus       325 lvi~~~~~~~~~~~~~~~~f~i~gll~g~s-~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~i  403 (438)
T COG2270         325 LVILSIAALYLIFLEGELDFWILGLLVGTS-LGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQI  403 (438)
T ss_pred             HHHHHHHHHHHHHccccHHHHHHHHHHHHh-cchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHH
Confidence            776665555544444433222222333333 333344444444444 467899999999999999999999999998875


Q ss_pred             hhh
Q psy13668        313 WLA  315 (513)
Q Consensus       313 ~~~  315 (513)
                      .-.
T Consensus       404 Tg~  406 (438)
T COG2270         404 TGS  406 (438)
T ss_pred             hcc
Confidence            543

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.08  E-value=8.8e-08  Score=100.25  Aligned_cols=151  Identities=10%  Similarity=-0.012  Sum_probs=83.4

Q ss_pred             hhccchhHHHHHHH--HHHHHHHHHHHHhhHHHHHHHhcCcchh----hhhHHhchhHHHHHHHHHhhhhhcCCCcccch
Q psy13668        156 KIATSAPVIGLIIA--QIGHDFGLFTIVTDLPKYMKDVLHFSIT----SVDLISGWPNRSVIVTYKMRTILSGPRLTSPF  229 (513)
Q Consensus       156 ~~l~~~~~~~~~l~--~~~~~~~~~~~~~~lp~~l~~~~g~s~~----~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~  229 (513)
                      +.+|++.+....+.  ..+....+....+.++.+.++..+.+..    ....+.+...+..++..++.+++.||.++|+.
T Consensus       262 ~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~  341 (489)
T PRK10207        262 KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGK  341 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCC
Confidence            34555554443322  2222233333446777787753333210    12223334456666788888999999988863


Q ss_pred             -------hhHhhHHHHHHHHHH-----HhcC----ChhHHHHHH-HHHHHHHHhhhhhhHHHhh-cccCcchhHHHHHHH
Q psy13668        230 -------DFSASVGPGLGILAA-----SYSG----CNRLAVTVS-FTLGMGTMGAFLPSLKVNA-LDLSPNYAGTLMALV  291 (513)
Q Consensus       230 -------~~~~~~~~~~~~~~l-----~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~p~~~g~~~gi~  291 (513)
                             ...++++.+++...+     .+..    .+.++.+.. +..+.+ -++..+...... ...+++.+|.++|+.
T Consensus       342 ~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~G-e~~~~~~g~~~~~~~aP~~~~g~~~g~~  420 (489)
T PRK10207        342 DLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG-ELFISALGLAMIAALVPQHLMGFILGMW  420 (489)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH-HHHHhHHHHHHHHHhChHHHHHHHHHHH
Confidence                   556666655554332     1211    122333333 333333 334444444444 444456799999999


Q ss_pred             HHHHhHHhhHHHHHHH
Q psy13668        292 GGIGALSGTVSPYLVG  307 (513)
Q Consensus       292 ~~~~~i~~~igp~l~g  307 (513)
                      ++..++|+.++..+.+
T Consensus       421 ~l~~~ig~~lg~~l~~  436 (489)
T PRK10207        421 FLTQAAAFLLGGYVAT  436 (489)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999988876654

>KOG2615|consensus

Probab=99.07  E-value=5.8e-08  Score=93.77  Aligned_cols=289  Identities=12%  Similarity=0.037  Sum_probs=152.3

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHH-------HHH----hhh-----------
Q psy13668         18 QQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWM-------TFA----TGA-----------   75 (513)
Q Consensus        18 r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~-------~~~----~~~-----------   75 (513)
                      .....|+..+.+.+++.+..+.-|.++|++ |+|.+.....+-..+...+|.       +..    .|.           
T Consensus        66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAi  144 (451)
T KOG2615|consen   66 SVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAI  144 (451)
T ss_pred             cchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHH
Confidence            445588999999999999999999999999 999987653322222222211       111    110           


Q ss_pred             ---------------------hhHHHHHHHHHHHHHh---ccCCchHHHHHHHHHH--HHHH--HHHHHhccCCCCCccc
Q psy13668         76 ---------------------QIGNVVSMAVSGLLIR---YLGGWTSVFYVFGAVG--LAWF--ALWMTFASSDPSESTH  127 (513)
Q Consensus        76 ---------------------~~g~~~~~~~~~~l~~---~~~gWr~~f~i~~~~~--~~~~--~~~~~~~~~~p~~~~~  127 (513)
                                           .+|.+++|.+++++..   .. | +.+|.....+.  +...  ....+++||.-..++.
T Consensus       145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~-g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~  222 (451)
T KOG2615|consen  145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSIS-G-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR  222 (451)
T ss_pred             HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhh-c-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence                                 3678889999998876   22 2 22232212111  1111  1223344543211111


Q ss_pred             hhcccccccccchhhhhccCCCCCCchhhhccchhHH------HH-HHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhh
Q psy13668        128 YVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVI------GL-IIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVD  200 (513)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~-~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~  200 (513)
                      .  .++...++..+...+..+.++..-...++|++..      .. .+-.+.+...+-.+....+.+-.+.+|+++.+.|
T Consensus       223 ~--~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G  300 (451)
T KOG2615|consen  223 N--DEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQG  300 (451)
T ss_pred             c--ccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhe
Confidence            1  0000000000000111111111112234443222      11 1222333333333344444444677899999999


Q ss_pred             HHhchhHHHHHHHHHhhhhhcCCCc--ccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcc
Q psy13668        201 LISGWPNRSVIVTYKMRTILSGPRL--TSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALD  278 (513)
Q Consensus       201 ~~~~~~~~~~~ig~~~~g~l~dr~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (513)
                      -+.+..++.+.+.........||.+  .+-.....+..+.-..+++.................+. .....+........
T Consensus       301 ~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~-~A~~vt~Lt~Lv~~  379 (451)
T KOG2615|consen  301 KVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFS-TASVVTCLTSLVHK  379 (451)
T ss_pred             eeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHH-HHHhhHHHHHHHHh
Confidence            9999988888887777777777765  33333333333333334444333333332222222222 22333344444445


Q ss_pred             cC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        279 LS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       279 ~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .. +++||++.|+....+.++-++||.+.|.+...
T Consensus       380 ~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W  414 (451)
T KOG2615|consen  380 YGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW  414 (451)
T ss_pred             cCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence            55 56799999999999999999999999887753

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.05  E-value=1.3e-09  Score=113.59  Aligned_cols=110  Identities=11%  Similarity=-0.011  Sum_probs=83.7

Q ss_pred             hhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh---HHHHHHHHHHHHHHhhhhhhH
Q psy13668        196 ITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR---LAVTVSFTLGMGTMGAFLPSL  272 (513)
Q Consensus       196 ~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  272 (513)
                      ..+.+++.+...++..++.+..|+++||+|||+....+.++..++..+........   ......+..+.+ .+...+..
T Consensus        70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~-~~~~~~~~  148 (481)
T TIGR00879        70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIG-VGIASALV  148 (481)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhh-hhHHHhHH
Confidence            78999999999999999999999999999999999888888877777665443322   222222333332 33444455


Q ss_pred             HHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668        273 KVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLV  306 (513)
Q Consensus       273 ~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~  306 (513)
                      .....|.. +++|+.+.++.+....+|..++|.+.
T Consensus       149 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~  183 (481)
T TIGR00879       149 PMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG  183 (481)
T ss_pred             HHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence            56666776 56799999999999999999999988

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK11462 putative transporter; Provisional

Probab=99.04  E-value=9.4e-08  Score=99.48  Aligned_cols=196  Identities=11%  Similarity=-0.004  Sum_probs=106.8

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668         95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD  174 (513)
Q Consensus        95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~  174 (513)
                      +|+....+.++++++...+.+...+|++++++         . +. .        .+..++..++|+++.......++..
T Consensus       181 g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~---------~-~~-~--------~~~~l~~~~~Nk~~~~l~~~~~~~~  241 (460)
T PRK11462        181 GFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP---------T-TT-S--------MREDLRDIWQNDQWRIVGLLTIFNI  241 (460)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcceeccCCCc---------c-CC-C--------HHHHHHHHhCChHHHHHHHHHHHHH
Confidence            67777777776666655544444444322110         0 00 0        0112356788888876665555444


Q ss_pred             HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCCh-hHH
Q psy13668        175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCN-RLA  253 (513)
Q Consensus       175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~  253 (513)
                      ............|.+...|.+ ...+.+.....++++++.+++++++||+++|+....+..+..+....+.+.+.. ...
T Consensus       242 ~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (460)
T PRK11462        242 LAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASIT  320 (460)
T ss_pred             HHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHH
Confidence            444433333434444344432 334455667778889999999999999999887664444333322223233222 222


Q ss_pred             HHHH-HHHHHHHHhhhhhhHHHhhcccCc--------chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        254 VTVS-FTLGMGTMGAFLPSLKVNALDLSP--------NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       254 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .... +..+++ .+...+.......|...        +..|...+..+....++.++++.+.|.+++
T Consensus       321 ~~~~~~l~g~~-~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~  386 (460)
T PRK11462        321 MFVFIFVIGVL-HQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA  386 (460)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222 222222 22333333333333332        235666788888999999999999887775

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.04  E-value=2.4e-09  Score=110.67  Aligned_cols=152  Identities=13%  Similarity=0.087  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-cccchhhHhhHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-LTSPFDFSASVGPGL  239 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~  239 (513)
                      +.++..+...+.....+|+...++|.|+++.+|++..+++.+.........++.+.+|+++||+ |||+....+.+...+
T Consensus         9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l   88 (493)
T PRK15462          9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI   88 (493)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence            4577778888888899999999999999999999999999999999999999999999999998 999999988888888


Q ss_pred             HHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc---hhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        240 GILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN---YAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      +.+++.............+.+.....+...+.......|.+|+   +|..+.++.+...++|+.++|.+.+.+.+.
T Consensus        89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~  164 (493)
T PRK15462         89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE  164 (493)
T ss_pred             HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh
Confidence            7766554322211111111122222344445555667777753   599999999999999999999999998764

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.03  E-value=8.2e-09  Score=105.19  Aligned_cols=145  Identities=14%  Similarity=0.116  Sum_probs=105.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHH
Q psy13668        165 GLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAA  244 (513)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l  244 (513)
                      ...+..+....+.......+|.+.++ +|.|..+.+...+...++..++.+..|+++||+|||+.+..+.+...++....
T Consensus         7 ~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~   85 (392)
T PRK10473          7 CSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLC   85 (392)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence            34444445555555666677777655 79999999999999999999999999999999999999988888877777776


Q ss_pred             HhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        245 SYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ...++........+..+.+ .+...+.......+.. +++|+.+.+..+....++..++|.+.+.+.+
T Consensus        86 ~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~  152 (392)
T PRK10473         86 SLAETSSLFLAGRFLQGIG-AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML  152 (392)
T ss_pred             HHhCcHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6655433333333333322 2333344445555555 5789999999999999999999998887654

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.02  E-value=7.8e-09  Score=104.63  Aligned_cols=131  Identities=15%  Similarity=0.124  Sum_probs=100.1

Q ss_pred             HHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHH
Q psy13668        179 TIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSF  258 (513)
Q Consensus       179 ~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  258 (513)
                      .+...+|.+.++ +|.|..+.+...+...++..++.+..|+++||++||+....+.++.+++...+...++........+
T Consensus         9 ~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   87 (377)
T PRK11102          9 MYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRF   87 (377)
T ss_pred             HHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence            334567777765 7999999999999999999999999999999999999999888888888777766554333333333


Q ss_pred             HHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        259 TLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ..+.+ .+...+.......+..| ++|+++.++.+....++..++|.+.+.+.+
T Consensus        88 l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~  140 (377)
T PRK11102         88 LHGLA-AAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV  140 (377)
T ss_pred             HHHHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33322 33444445556666665 669999999999999999999999887766

>TIGR00889 2A0110 nucleoside transporter

Probab=99.01  E-value=1.9e-09  Score=110.74  Aligned_cols=85  Identities=16%  Similarity=0.114  Sum_probs=66.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcc-cchhhHhhHHHHHHHHH
Q psy13668        165 GLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLT-SPFDFSASVGPGLGILA  243 (513)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~-~~~~~~~~~~~~~~~~~  243 (513)
                      .+.+..++.+..+-.+...++.++++.+|+|..+.|++.+...++..++++..|+++||.++ |+....+.++..++...
T Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~   85 (418)
T TIGR00889         6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF   85 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence            34555666666666777889999999999999999999999999999999999999999865 66666666666565555


Q ss_pred             HHhcCC
Q psy13668        244 ASYSGC  249 (513)
Q Consensus       244 l~~~~~  249 (513)
                      ..+.++
T Consensus        86 ~~~~~~   91 (418)
T TIGR00889        86 AAQVTT   91 (418)
T ss_pred             HHHhcC
Confidence            554433

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=98.99  E-value=6.3e-09  Score=120.91  Aligned_cols=157  Identities=8%  Similarity=-0.102  Sum_probs=107.0

Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcch--hhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668        156 KIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSI--TSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA  233 (513)
Q Consensus       156 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~--~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~  233 (513)
                      ..++++.+...++..++...........+..++...++.+.  ...+++.+...++..++.+..|+++||+|||+++..+
T Consensus         4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~   83 (1146)
T PRK08633          4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIV   83 (1146)
T ss_pred             chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHH
Confidence            45667777777777777666655555555555555555543  3357778888889999999999999999999998877


Q ss_pred             hHHHHHHHHHHHhc--CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        234 SVGPGLGILAASYS--GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       234 ~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                      .++..+..++....  ..+.+..++...+.....+...+.......+..| ++|+.++|+.+...++|.+++|.+.+.+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~  163 (1146)
T PRK08633         84 KLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLF  163 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            76554444333222  2222222222222223344555566667777774 67999999999999999999999998886


Q ss_pred             cc
Q psy13668        311 PN  312 (513)
Q Consensus       311 ~~  312 (513)
                      +.
T Consensus       164 ~~  165 (1146)
T PRK08633        164 ES  165 (1146)
T ss_pred             Hh
Confidence            54

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=98.99  E-value=3.8e-09  Score=107.33  Aligned_cols=147  Identities=14%  Similarity=-0.013  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHH-HHHHHH
Q psy13668        164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVG-PGLGIL  242 (513)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~-~~~~~~  242 (513)
                      +...+..+....++.....++|.|+++ +|+|..+.++..+...+...++.++.|.++||.+|+......... ..+...
T Consensus         7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~   85 (382)
T TIGR00902         7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA   85 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence            335555666666666677889999976 699999999999999999999999999999999885443222221 112222


Q ss_pred             HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .+....++.+..+....+...+.....+.......+. +++++...|.....+++|..++|.+.|.+.+.
T Consensus        86 ~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~  154 (382)
T TIGR00902        86 AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW-QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM  154 (382)
T ss_pred             HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH-HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222223333332222222222222334443443332 56789999999999999999999999998874

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=98.98  E-value=8.1e-10  Score=110.46  Aligned_cols=75  Identities=11%  Similarity=-0.063  Sum_probs=64.0

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH
Q psy13668        158 ATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS  232 (513)
Q Consensus       158 l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~  232 (513)
                      .|++++|......+...+.+-....+.|.|+++..|+|.++.|.+.+...+..++.+++.|.++||.+.||-...
T Consensus         4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~   78 (412)
T PF01306_consen    4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLW   78 (412)
T ss_dssp             CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHH
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHH
Confidence            467889988888888888888889999999999889999999999999999999999999999999997665443

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=98.98  E-value=6.6e-09  Score=120.52  Aligned_cols=157  Identities=11%  Similarity=-0.104  Sum_probs=94.1

Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHHHh----hHHHHHHHhcCcc-hhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchh
Q psy13668        156 KIATSAPVIGLIIAQIGHDFGLFTIVT----DLPKYMKDVLHFS-ITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFD  230 (513)
Q Consensus       156 ~~l~~~~~~~~~l~~~~~~~~~~~~~~----~lp~~l~~~~g~s-~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~  230 (513)
                      .+++++++..++...++....-+....    +.+..+.+..+.+ ....++..+...+...+..++.|+++||++||+++
T Consensus         6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~   85 (1140)
T PRK06814          6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA   85 (1140)
T ss_pred             hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence            456666666666655555444332222    2221222222222 23456777788888999999999999999999875


Q ss_pred             hHhhHH--HHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        231 FSASVG--PGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       231 ~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      .....+  .......+.+...+.+..++...+...+.+...+...+...+.. +++++.++|+.+...+++.++||.+.|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g  165 (1140)
T PRK06814         86 KILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGG  165 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHH
Confidence            332221  11112222222223333333322222234445566666666666 567999999999999999999999999


Q ss_pred             Hhccc
Q psy13668        308 VLTPN  312 (513)
Q Consensus       308 ~l~~~  312 (513)
                      .+.+.
T Consensus       166 ~l~~~  170 (1140)
T PRK06814        166 LATIS  170 (1140)
T ss_pred             HHHhc
Confidence            98763

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.96  E-value=4.4e-08  Score=99.16  Aligned_cols=242  Identities=14%  Similarity=0.088  Sum_probs=168.9

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccCC
Q psy13668         16 NEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGG   95 (513)
Q Consensus        16 ~~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g   95 (513)
                      +||.+..+.-.....+|..+...+.+++...+++                        +               -... |
T Consensus       145 ~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~------------------------~---------------~~~~-g  184 (467)
T COG2211         145 QERASLTSWRMVFASLGGLLVAVLFPPLVKLFGG------------------------G---------------DKAL-G  184 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------------------C---------------cchh-h
Confidence            3666666666666666666666666666555421                        0               0022 8


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHH
Q psy13668         96 WTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDF  175 (513)
Q Consensus        96 Wr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~  175 (513)
                      |+..-.+.++++.+..+..++..+|++.+....       ++.++..       .+..+..+++|+++...++..++...
T Consensus       185 ~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~-------~~~~~~~-------~~~~~~~~~~Nrp~~~~l~~~l~~~~  250 (467)
T COG2211         185 YQGTALVLGVIGVILLLFCFFNVKERVVETQPT-------KTGVKLK-------LKDSFLLIFKNRPLLLLLLMNLLLFI  250 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCccccC-------ccccccc-------HHHHHHHHHccchHHHHHHHHHHHHH
Confidence            888888888888887777777777776533222       1101110       01112357889999888887777777


Q ss_pred             HHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHH
Q psy13668        176 GLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVT  255 (513)
Q Consensus       176 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  255 (513)
                      +...-.+....|.+..+|.+.............+.+++.+....+.+|+|+|+....+.++.+++...+.+.+.+....+
T Consensus       251 ~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~  330 (467)
T COG2211         251 AFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLI  330 (467)
T ss_pred             HHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHH
Confidence            77777777778888778888888888888888888888999999999999999999999998888888887775443333


Q ss_pred             HHH-HHHHHHHhhhhhhHHHhhcccC--------cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        256 VSF-TLGMGTMGAFLPSLKVNALDLS--------PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       256 ~~~-~~~~~~~~~~~~~~~~~~~~~~--------p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      +.. ++.....+...+..++...|..        .+..|...|..+.+.=++.+++..+.|.+++
T Consensus       331 ~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~  395 (467)
T COG2211         331 VVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG  395 (467)
T ss_pred             HHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333 4444445555566666666654        2448889999999999999999888877765

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=98.96  E-value=1e-09  Score=110.68  Aligned_cols=72  Identities=10%  Similarity=-0.082  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHH
Q psy13668        172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAA  244 (513)
Q Consensus       172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l  244 (513)
                      +.+.....+....|. +++.+|+|..+.+++.+...++..++.+..|+++||++||+....+.++..++.++.
T Consensus         6 ~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~   77 (379)
T TIGR00881         6 AYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF   77 (379)
T ss_pred             HHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH
Confidence            334444555556664 566789999999999999999999999999999999999998887666555544433

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=98.95  E-value=1.2e-08  Score=107.17  Aligned_cols=158  Identities=10%  Similarity=-0.024  Sum_probs=116.8

Q ss_pred             hhhccch-hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC-CcccchhhH
Q psy13668        155 GKIATSA-PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP-RLTSPFDFS  232 (513)
Q Consensus       155 ~~~l~~~-~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~  232 (513)
                      .+.+++| .++..++..++...++|.+..++|.|+++.+|+|..+++..............+++|+++|| +|||+....
T Consensus        14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~   93 (500)
T PRK09584         14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIML   93 (500)
T ss_pred             hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence            3456766 48888888899999999999999999999999999988877766665555556789999999 599999999


Q ss_pred             hhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc---hhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        233 ASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN---YAGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       233 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      +.++..++..++...............+...+.+...+.......+.+|+   ++..+.++.+...++|+.++|.+.|.+
T Consensus        94 g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l  173 (500)
T PRK09584         94 GAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWL  173 (500)
T ss_pred             HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHH
Confidence            98888888777766543332222222222222344445555566666543   245678888999999999999999999


Q ss_pred             ccc
Q psy13668        310 TPN  312 (513)
Q Consensus       310 ~~~  312 (513)
                      .+.
T Consensus       174 ~~~  176 (500)
T PRK09584        174 AAK  176 (500)
T ss_pred             HHh
Confidence            774

>KOG0255|consensus

Probab=98.95  E-value=3.4e-07  Score=97.04  Aligned_cols=285  Identities=15%  Similarity=0.097  Sum_probs=162.5

Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-----------HHHHHHhh-------
Q psy13668         13 RLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-----------LWMTFATG-------   74 (513)
Q Consensus        13 ~~~~~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-----------~~~~~~~~-------   74 (513)
                      +++-+......+..+.+.+|..+|+++.|.++|++ |+|.++.+.-.+..+..+           ....+..+       
T Consensus       111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~  189 (521)
T KOG0255|consen  111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL  189 (521)
T ss_pred             ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence            34434555567778888999999999999999998 999998864333322221           11111111       


Q ss_pred             -------------------------hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchh
Q psy13668         75 -------------------------AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYV  129 (513)
Q Consensus        75 -------------------------~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~  129 (513)
                                               .-.++.+.++.++++..   +||+.+++..++.....++ +++.+|.|.......
T Consensus       190 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g  265 (521)
T KOG0255|consen  190 TVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKG  265 (521)
T ss_pred             HHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcC
Confidence                                     01233444455555544   8999999988888776655 344456653211110


Q ss_pred             cccccc---c---------ccch---hhh--hcc----CCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy13668        130 AYGTAV---M---------HKSN---RFI--FSF----QNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYM  188 (513)
Q Consensus       130 ~~~~~~---~---------~~~~---~~~--~~~----~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l  188 (513)
                      +..++.   +         .+..   +..  .+.    ...++..+.++++.+++....+...+.. ..+....+.-.+.
T Consensus       266 ~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~-~~~~~~y~gl~~~  344 (521)
T KOG0255|consen  266 RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIW-FVFSLVYYGLSLN  344 (521)
T ss_pred             chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHH-HHHhHHHHhhhhh
Confidence            000000   0         0000   000  000    0012234566666654332222222211 1122222222222


Q ss_pred             HHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhH--HHHHHHHHHHHHHh
Q psy13668        189 KDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRL--AVTVSFTLGMGTMG  266 (513)
Q Consensus       189 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~  266 (513)
                      .+.+|.+..   .........-..+....+...|+.|||.....+.+...++++..........  ...+...++.++.+
T Consensus       345 ~~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (521)
T KOG0255|consen  345 VSGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIG  421 (521)
T ss_pred             hhhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Confidence            222333322   2222233355666667789999999999999999999988888887665443  44445555555555


Q ss_pred             hhhhhHHHhhcccCcc-hhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668        267 AFLPSLKVNALDLSPN-YAGTLMALVGGIGALSGTVSPYLV  306 (513)
Q Consensus       267 ~~~~~~~~~~~~~~p~-~~g~~~gi~~~~~~i~~~igp~l~  306 (513)
                      ...........++.|. .|..+.+..+....++++++|.+.
T Consensus       422 ~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~  462 (521)
T KOG0255|consen  422 SAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFP  462 (521)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555567888888876 499999999999999999999875

>PRK11010 ampG muropeptide transporter; Validated

Probab=98.95  E-value=2.5e-08  Score=104.60  Aligned_cols=152  Identities=13%  Similarity=-0.068  Sum_probs=106.8

Q ss_pred             hccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-----cccch-h
Q psy13668        157 IATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-----LTSPF-D  230 (513)
Q Consensus       157 ~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~~-~  230 (513)
                      ..++++.+..+...+......+.....+|.++++. |.|..+.+........  .+..++.|.++||+     |||+. +
T Consensus         8 ~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~gpl~Dr~~~~~~Grrr~~l   84 (491)
T PRK11010          8 IFQQPNSAILLILGFASGLPLALTSGTLQAWMTVE-NIDLKTIGFFSLVGQA--YVFKFLWSPLMDRYTPPFLGRRRGWL   84 (491)
T ss_pred             HHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCCchHHH
Confidence            34556677777777777788888888899999875 9999998886322222  26889999999998     88875 5


Q ss_pred             hHhhHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        231 FSASVGPGLGILAASYSGC--NRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       231 ~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      ..+.+..+++...+.+...  +.........+...+.....+.......|..| ++|+.+.++......+|..+++.+.+
T Consensus        85 l~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~  164 (491)
T PRK11010         85 LATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLAL  164 (491)
T ss_pred             HHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5666666666666555432  22222222222233344555556677777775 77999999999999999999998888


Q ss_pred             Hhcc
Q psy13668        308 VLTP  311 (513)
Q Consensus       308 ~l~~  311 (513)
                      .+.+
T Consensus       165 ~l~~  168 (491)
T PRK11010        165 WLAD  168 (491)
T ss_pred             HHHh
Confidence            8776

>TIGR00895 2A0115 benzoate transport

Probab=98.93  E-value=1.3e-09  Score=110.68  Aligned_cols=72  Identities=4%  Similarity=-0.151  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668        169 AQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI  241 (513)
Q Consensus       169 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~  241 (513)
                      ..+.............|.+. +.+|.+..+.+++.+...++..++.+..|+++||++||+....+.++..++.
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~   96 (398)
T TIGR00895        25 IMLMDGYDLAAMGFAAPAIS-AEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFT   96 (398)
T ss_pred             HHHHHHHHHHHHHhhHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            33333333444455566555 4579999999999999999999999999999999999998777555444433

>TIGR00898 2A0119 cation transport protein

Probab=98.93  E-value=5.2e-09  Score=110.43  Aligned_cols=121  Identities=11%  Similarity=0.019  Sum_probs=91.3

Q ss_pred             HHhcCcc---hhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Q psy13668        189 KDVLHFS---ITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTM  265 (513)
Q Consensus       189 ~~~~g~s---~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  265 (513)
                      ++.++++   ..+.++..+...++..++.++.|+++||+|||+....+.++..++.+...+.++-....+..+.. ....
T Consensus       116 ~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~-G~~~  194 (505)
T TIGR00898       116 VTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV-GMGI  194 (505)
T ss_pred             EEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH-Hhhc
Confidence            4557888   88899999999999999999999999999999999988888888777776655433333333333 3334


Q ss_pred             hhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        266 GAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       266 ~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                      +...+.......|..| ++|+.+.++......+|..++|.+.+.+.
T Consensus       195 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~  240 (505)
T TIGR00898       195 GGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP  240 (505)
T ss_pred             cchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4446666667777775 66999999998888888888887765543

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=98.93  E-value=4e-09  Score=109.20  Aligned_cols=80  Identities=10%  Similarity=0.023  Sum_probs=57.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668        162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI  241 (513)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~  241 (513)
                      .++...+.....+...+.+..+.| ++++ .|+|..+.++..+...++..++.+..|+++||++||+....+.+..+++.
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~  105 (438)
T TIGR00712        28 VFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVM  105 (438)
T ss_pred             HHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHH
Confidence            334444444444433444455565 4556 49999999999999999999999999999999999998777655555544


Q ss_pred             HH
Q psy13668        242 LA  243 (513)
Q Consensus       242 ~~  243 (513)
                      +.
T Consensus       106 ~~  107 (438)
T TIGR00712       106 LL  107 (438)
T ss_pred             HH
Confidence            33

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK10133 L-fucose transporter; Provisional

Probab=98.93  E-value=4e-08  Score=101.62  Aligned_cols=146  Identities=12%  Similarity=-0.015  Sum_probs=104.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668        162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI  241 (513)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~  241 (513)
                      ++....+..+............+|.+ ++.+|.|..+.++..+...++..++.+..|++.||+|||+.+..+....+++.
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~  105 (438)
T PRK10133         27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGA  105 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence            44555555566566666666778776 78899999999999999999999999999999999999999999998888888


Q ss_pred             HHHHh--cCChhHH-HHHHHHHHHHHHhhhhhhHHHhhcccCcch-hHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        242 LAASY--SGCNRLA-VTVSFTLGMGTMGAFLPSLKVNALDLSPNY-AGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       242 ~~l~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      ++...  ..++... ....+..+.+. +...+.......+..|++ ++...+..+....+|..++|.+.+.+
T Consensus       106 ~l~~~~~~a~~~~~ll~~r~l~G~g~-g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l  176 (438)
T PRK10133        106 ALFWPAAEIMNYTLFLVGLFIIAAGL-GCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL  176 (438)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHH-HHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66532  2233332 23333333333 333333344444666655 55578888999999999998876643

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=98.93  E-value=5.4e-08  Score=101.62  Aligned_cols=70  Identities=30%  Similarity=0.632  Sum_probs=59.8

Q ss_pred             echhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-ccCchHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy13668          6 INNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRY-LGGWTSVFYVFGAVGLAWFALWMTFATGAQ   76 (513)
Q Consensus         6 ~~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~-~~gwr~if~~~g~~~~~~~~~~~~~~~~~~   76 (513)
                      .....+.+|+|  ||+++.++..++..+|.++++++++.+.+. . |||+.|++.+++++++.+.+..+..+.|
T Consensus       151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~-gw~~~f~i~~~~~~~~~~~~~~~~~~~p  223 (465)
T TIGR00894       151 ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG-GWPMIFYVFGIVGCAWSLLWFVFPADDP  223 (465)
T ss_pred             hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence            34567889994  788889999999999999999999999998 6 9999999999998888887777665543

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=98.92  E-value=1.7e-08  Score=105.82  Aligned_cols=97  Identities=12%  Similarity=0.223  Sum_probs=64.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH----------------------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL----------------------------------   67 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~----------------------------------   67 (513)
                      .+...+...++.+++.++.|++.||+ |.|.++.+...+..+....                                  
T Consensus        39 ~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~  117 (485)
T TIGR00711        39 VQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLN  117 (485)
T ss_pred             hhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            56788889999999999999999999 8888766422111110000                                  


Q ss_pred             ----------HHHHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccC
Q psy13668         68 ----------WMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASS  120 (513)
Q Consensus        68 ----------~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~  120 (513)
                                ..+......+|..+++.+++.+.+.. +||+.|++.+.++++..++..++.++
T Consensus       118 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~~~~~~  179 (485)
T TIGR00711       118 IYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWRWIFLINVPIGIIVVVVAFFILPR  179 (485)
T ss_pred             HCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-CceehhhhhhHHHHHHHHHHHHHcCC
Confidence                      00111111356677788888888887 99999998877776665555555554

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=98.90  E-value=3.2e-08  Score=101.62  Aligned_cols=126  Identities=11%  Similarity=0.004  Sum_probs=95.8

Q ss_pred             HHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q psy13668        184 LPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMG  263 (513)
Q Consensus       184 lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  263 (513)
                      +|. +.+.++.+..+.+...+.+.++..++.+..|.++||+|||+.+..+.++..++.+.....++........+..+.+
T Consensus        39 l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~  117 (413)
T PRK15403         39 IIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTS  117 (413)
T ss_pred             HHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            444 4566899999999999999999999999999999999999999988888888777776665544444443444443


Q ss_pred             HHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        264 TMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       264 ~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .. ...+.......|..| ++++++.++.+....++..++|.+.+.+.+
T Consensus       118 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~  165 (413)
T PRK15403        118 IC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH  165 (413)
T ss_pred             HH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            32 223333455666665 568999999999999999999999887765

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=98.90  E-value=2.2e-08  Score=100.87  Aligned_cols=148  Identities=14%  Similarity=0.043  Sum_probs=113.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668        162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI  241 (513)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~  241 (513)
                      .++..++..+......+.+..+.|.++++.+|+|..+.+++.+...++..++.+..|+++||+|||+....+.+...++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~   81 (366)
T TIGR00886         2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPC   81 (366)
T ss_pred             chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence            46777788888888888889999988888999999999999999999999999999999999999999999888888887


Q ss_pred             HHHHhcC-ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        242 LAASYSG-CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       242 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      +...+.+ +.....+..+..+.+ .+ ..........+.. +++|+.+.++.....++|..+++.+.+.+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~g~~-~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~  151 (366)
T TIGR00886        82 LWAGLAVQSYSVLLLLRLFIGIA-GG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG  151 (366)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHh-ch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            7776655 333233333333333 22 2333444555665 4679999999998888887777777665543

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=98.90  E-value=3.6e-07  Score=94.26  Aligned_cols=280  Identities=13%  Similarity=0.081  Sum_probs=159.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhh----ccCchHHHHHHHHHHHHHHHHHHHH------------------------
Q psy13668         20 SNTVILMAGAQIGNVVSMAVSGLLIRY----LGGWTSVFYVFGAVGLAWFALWMTF------------------------   71 (513)
Q Consensus        20 ~~~~i~~~~~~lG~~i~~~i~g~L~~~----~~gwr~if~~~g~~~~~~~~~~~~~------------------------   71 (513)
                      ...+.......+..++..|+.|+++||    + |+|..|...+.+..+..+....+                        
T Consensus        39 ~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~  117 (477)
T TIGR01301        39 AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVF  117 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHH
Confidence            345666667778888889999999995    8 99999886544333222111100                        


Q ss_pred             -----Hhh-----------------------------------hhhHHHHHHHHHHHH--Hhcc------------CCch
Q psy13668         72 -----ATG-----------------------------------AQIGNVVSMAVSGLL--IRYL------------GGWT   97 (513)
Q Consensus        72 -----~~~-----------------------------------~~~g~~~~~~~~~~l--~~~~------------~gWr   97 (513)
                           ..+                                   ..+|.++++.+++..  .+..            .+-|
T Consensus       118 ~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  197 (477)
T TIGR01301       118 VVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLK  197 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHH
Confidence                 000                                   024556666665543  1110            0347


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccc-----hhHHHHHHHHHH
Q psy13668         98 SVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATS-----APVIGLIIAQIG  172 (513)
Q Consensus        98 ~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~l~~~~  172 (513)
                      ..|++.+++.++..+...+..+|.|...+.. .     .+++.+  +..+......+++++++     +.++.+++..++
T Consensus       198 ~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~-~-----~~~~~~--~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqff  269 (477)
T TIGR01301       198 SCFLIDIILLAILTYIALSAVKENPLIGSDD-F-----INSEAA--PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCL  269 (477)
T ss_pred             HHHHHHHHHHHHHHHHHeeeeeccCCCcccc-c-----hhhhcc--cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHH
Confidence            7888777766666666666677754321110 0     000000  00000111123334332     678999999999


Q ss_pred             HHHHHHHHHhhHHHHHHH-hcCcchh------hh---h-HHhchhHHHHHHHHHhhhhhcCCCcc-cchhhHhhHHHHHH
Q psy13668        173 HDFGLFTIVTDLPKYMKD-VLHFSIT------SV---D-LISGWPNRSVIVTYKMRTILSGPRLT-SPFDFSASVGPGLG  240 (513)
Q Consensus       173 ~~~~~~~~~~~lp~~l~~-~~g~s~~------~~---~-~~~~~~~~~~~ig~~~~g~l~dr~~~-~~~~~~~~~~~~~~  240 (513)
                      .-.+++.+..|...|..+ .++-++.      +.   | +......+...+.+++--++.+|+++ |+....+.++.+++
T Consensus       270 sW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~  349 (477)
T TIGR01301       270 NWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAIC  349 (477)
T ss_pred             HHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence            999999999999888764 4553321      11   2 23334445555666677778888884 67768887777777


Q ss_pred             HHHHHhcCC------h--------------hHHHHHHHH-HHHHHHhhhhhhHHHhhcccCc--chhHHHHHHHHHHHhH
Q psy13668        241 ILAASYSGC------N--------------RLAVTVSFT-LGMGTMGAFLPSLKVNALDLSP--NYAGTLMALVGGIGAL  297 (513)
Q Consensus       241 ~~~l~~~~~------~--------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p--~~~g~~~gi~~~~~~i  297 (513)
                      +....+...      .              ....+..+. ++.........++.....+..+  +..|.-+|+.|.+..+
T Consensus       350 l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~l  429 (477)
T TIGR01301       350 LAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVI  429 (477)
T ss_pred             HHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHH
Confidence            766654321      0              122222222 2222222333333444444442  4579999999999999


Q ss_pred             HhhHHHHHHHH
Q psy13668        298 SGTVSPYLVGV  308 (513)
Q Consensus       298 ~~~igp~l~g~  308 (513)
                      ++.+.....|.
T Consensus       430 pQii~sl~~g~  440 (477)
T TIGR01301       430 PQIIVSLGSGP  440 (477)
T ss_pred             HHHHHHHHHHH
Confidence            99998887766

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>KOG0254|consensus

Probab=98.89  E-value=1.4e-07  Score=99.66  Aligned_cols=272  Identities=13%  Similarity=0.076  Sum_probs=155.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHH------HHHHh-----hh---------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALW------MTFAT-----GA---------------   75 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~------~~~~~-----~~---------------   75 (513)
                      .+.+.+...+|.+++.++.|.++|++ |+|..+.+..+.-.+..++.      ..+..     +.               
T Consensus        91 ~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE  169 (513)
T KOG0254|consen   91 QGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE  169 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence            47889999999999999999999999 99988775432222211110      00000     00               


Q ss_pred             ------------------hhHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchh-------
Q psy13668         76 ------------------QIGNVVSMAVSGLLIRYL-GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYV-------  129 (513)
Q Consensus        76 ------------------~~g~~~~~~~~~~l~~~~-~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~-------  129 (513)
                                        .+|..++. +.+....+. .+||..+.+..+.+++..+. .++.||.|...-+..       
T Consensus       170 iap~~~RG~l~~~~~l~~~~Gi~~~~-~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~  247 (513)
T KOG0254|consen  170 IAPAHIRGTLVSLYQLFITIGILLGY-CINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKR  247 (513)
T ss_pred             cCChhhhHHHHHHHHHHHHHHHHHHH-HHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHH
Confidence                              12222221 222222211 17999998888888887777 777788774321110       


Q ss_pred             --c--cc--ccccccchhhhh-----ccCC-CCCCchhhhcc----chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC
Q psy13668        130 --A--YG--TAVMHKSNRFIF-----SFQN-LPPTPWGKIAT----SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH  193 (513)
Q Consensus       130 --~--~~--~~~~~~~~~~~~-----~~~~-~~~~~~~~~l~----~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g  193 (513)
                        .  ++  .+..+.+.+..+     +... ..+..+.++++    ++.++...+..+.+..+......|.+.+++.. |
T Consensus       248 ~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-g  326 (513)
T KOG0254|consen  248 SLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-G  326 (513)
T ss_pred             HHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-C
Confidence              0  00  000000000000     0000 01111233332    23344455555555555566777888887765 6


Q ss_pred             cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC----C-------hhHHHHH-HHHHH
Q psy13668        194 FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG----C-------NRLAVTV-SFTLG  261 (513)
Q Consensus       194 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~----~-------~~~~~~~-~~~~~  261 (513)
                      .+... ........+.+.++..+..++.||.|||+.+..+...+.++.+++....    .       ..+..+. .+...
T Consensus       327 ~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  405 (513)
T KOG0254|consen  327 LKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFI  405 (513)
T ss_pred             CCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHH
Confidence            55443 5556667778888888889999999999999999998888877665321    1       1122222 22222


Q ss_pred             HHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHH
Q psy13668        262 MGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALS  298 (513)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~  298 (513)
                      ..+.....+..+....|.+| +.|+.+.++........
T Consensus       406 ~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~  443 (513)
T KOG0254|consen  406 FSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLW  443 (513)
T ss_pred             HHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence            33344444555677788887 45999998877775444

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=98.89  E-value=8.6e-08  Score=100.77  Aligned_cols=140  Identities=9%  Similarity=-0.051  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh-hhH-----HhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHH
Q psy13668        165 GLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS-VDL-----ISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPG  238 (513)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~-~~~-----~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~  238 (513)
                      ...+..++-.+-+..+.... .++.+.++.+..+ ...     ..+...++..+|.++.|+++||+|||+.+..+.++.+
T Consensus        20 ~~~~g~~~~~~d~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~   98 (490)
T PRK10642         20 AASLGNAMEWFDFGVYGFVA-YALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMS   98 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence            33444444443333333344 4555555433322 111     1355667888999999999999999999999999999


Q ss_pred             HHHHHHHhcCChhH--------HHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668        239 LGILAASYSGCNRL--------AVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLV  306 (513)
Q Consensus       239 ~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~  306 (513)
                      ++.++..+.++-..        ..+.-+..++ ..+...+.......|..| ++||...++......+|..+++.+.
T Consensus        99 i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~-g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~  174 (490)
T PRK10642         99 ISTFCIGLIPSYATIGIWAPILLLLCKMAQGF-SVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV  174 (490)
T ss_pred             HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh-HhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            99888887765432        1112222233 234455566667777775 6799999988877777766666443

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=98.87  E-value=2.1e-08  Score=103.62  Aligned_cols=136  Identities=13%  Similarity=-0.018  Sum_probs=91.1

Q ss_pred             HHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC----Cccc-chhhHhhHHHHHHHHHHHhcC
Q psy13668        174 DFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP----RLTS-PFDFSASVGPGLGILAASYSG  248 (513)
Q Consensus       174 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~~-~~~~~~~~~~~~~~~~l~~~~  248 (513)
                      +.....+..+++.|+.+.+|+|+.+.+.+.+...+...+..++.|+++||    +||| +.+..+....+++..++...+
T Consensus        12 ~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~   91 (437)
T TIGR00792        12 NFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP   91 (437)
T ss_pred             HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC
Confidence            34445566789999999999999999999999999999999999999998    4554 456666666666666665544


Q ss_pred             Chh----HHHHHH-HHHHHHHHhhhhhhHHHhhcccC--cchhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        249 CNR----LAVTVS-FTLGMGTMGAFLPSLKVNALDLS--PNYAGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       249 ~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--p~~~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      ...    ...... ..+...........+.+...+..  +++|+...+..+....+|+.+++.+.+.+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l  159 (437)
T TIGR00792        92 DFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPL  159 (437)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            321    111111 11111122233344555556654  56799999988888888776665554443

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=98.87  E-value=1.5e-08  Score=105.33  Aligned_cols=62  Identities=11%  Similarity=0.013  Sum_probs=50.5

Q ss_pred             HhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHH
Q psy13668        181 VTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAA  244 (513)
Q Consensus       181 ~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l  244 (513)
                      ....| ++++. |+|..+.++..+...++..++++..|+++||+|||+++..+.++.+++.+.+
T Consensus        49 ~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~  110 (452)
T PRK11273         49 ALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFM  110 (452)
T ss_pred             HHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHH
Confidence            34555 56666 9999999999999999999999999999999999998877666555544433

>PRK09952 shikimate transporter; Provisional

Probab=98.86  E-value=5.8e-08  Score=100.53  Aligned_cols=143  Identities=10%  Similarity=-0.036  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHhc--CcchhhhhHHh-----chhHHHHHHHHHhhhhhcCCCcccchhhHhhHH
Q psy13668        164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVL--HFSITSVDLIS-----GWPNRSVIVTYKMRTILSGPRLTSPFDFSASVG  236 (513)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~--g~s~~~~~~~~-----~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~  236 (513)
                      ....+..++-..-...+....|.+..+.+  +.++.+ +...     ....++..+|.++.|+++||+|||+.+..+.+.
T Consensus        25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~  103 (438)
T PRK09952         25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWM  103 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHH
Confidence            34444444444444444445555555544  566553 3332     234455678888999999999999999999999


Q ss_pred             HHHHHHHHHhcCChhH--------HHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        237 PGLGILAASYSGCNRL--------AVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       237 ~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      .+++.++..+.++-..        ..+.-+..+.+ .+...+.......|..| ++||...+..+....+|..+++.+..
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~-~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~  182 (438)
T PRK09952        104 MGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFA-VGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVS  182 (438)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhh-hcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888888877765431        11111222322 33334444566667665 67999998888888888777765544


Q ss_pred             H
Q psy13668        308 V  308 (513)
Q Consensus       308 ~  308 (513)
                      .
T Consensus       183 ~  183 (438)
T PRK09952        183 L  183 (438)
T ss_pred             H
Confidence            3

>TIGR00788 fbt folate/biopterin transporter

Probab=98.86  E-value=9.1e-08  Score=99.71  Aligned_cols=224  Identities=11%  Similarity=-0.066  Sum_probs=134.6

Q ss_pred             hHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCC-Cccchhcccccccccc--------hhhhhccC
Q psy13668         77 IGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPS-ESTHYVAYGTAVMHKS--------NRFIFSFQ  147 (513)
Q Consensus        77 ~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~--------~~~~~~~~  147 (513)
                      .|.++++.+++.+.+.. +||..|++.+.+.++..+ ..++.+|++. ..+..       .+++        .... +..
T Consensus       169 ~G~~vg~~l~G~l~~~~-~~~~~f~~~a~l~ll~~~-~~~~~~E~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~  238 (468)
T TIGR00788       169 TGGLISSLLGGPLLDKT-LTRILFLITAALLLLQLF-VSNLSKERRAFVRPRI-------GTYLEMNMALLTLGVL-ANV  238 (468)
T ss_pred             HHHHHHHHHHHHHHHhc-CcchHHHHHHHHHHHHHH-HHHhcccccccccccc-------cccchhhhhhhhhhHH-HHH
Confidence            57788888888888887 999999988777766633 3345565431 11111       0000        0000 000


Q ss_pred             CCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCccc
Q psy13668        148 NLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTS  227 (513)
Q Consensus       148 ~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~  227 (513)
                      +......++.+++|.++...+..++.+....+.....-.+.++.+|+++.+.|+......++.+++....+++.+|++.|
T Consensus       239 ~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r  318 (468)
T TIGR00788       239 KVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR  318 (468)
T ss_pred             HHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH
Confidence            00001224557778877655544441111111110000133456899999999999999999999999999999999999


Q ss_pred             chhhHhhHHHHHHHHHHHhcC---------ChhHHHHH-HHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHh
Q psy13668        228 PFDFSASVGPGLGILAASYSG---------CNRLAVTV-SFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGA  296 (513)
Q Consensus       228 ~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~  296 (513)
                      +....+.+..+++.+......         .+...... ......+ .+...........+.. ++++|+..|+.+.+.+
T Consensus       319 ~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~  397 (468)
T TIGR00788       319 LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVL-AQLKFMPFLVLLARLCPSGCESSVFALLASILH  397 (468)
T ss_pred             HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHH-HHHHHccHHHHHHHhCCCCceehHHHHHHHHHH
Confidence            988888777776654432111         11111111 1222222 3333334455555565 5679999999999999


Q ss_pred             HHhhHHHHHHHHhcc
Q psy13668        297 LSGTVSPYLVGVLTP  311 (513)
Q Consensus       297 i~~~igp~l~g~l~~  311 (513)
                      ++..+++.+.|.+.+
T Consensus       398 lg~~v~~~~gg~l~~  412 (468)
T TIGR00788       398 LGSSVSGFLGVLLME  412 (468)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999987776664

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>KOG0252|consensus

Probab=98.85  E-value=6.9e-08  Score=95.49  Aligned_cols=64  Identities=16%  Similarity=0.104  Sum_probs=50.9

Q ss_pred             CCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHhhc
Q psy13668        389 LSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMG  465 (513)
Q Consensus       389 ~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~  465 (513)
                      .|.+.||+..|+....+.+|++++......+.+....             ...+.+.+|++.+++++++.+..+++-
T Consensus       435 FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp-------------~~~g~~~v~~i~~~~~~~gi~~T~l~p  498 (538)
T KOG0252|consen  435 FPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYP-------------PNIGVRNVFIILAGCMLLGILFTLLIP  498 (538)
T ss_pred             chHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCC-------------ccccchHHHHHHHHHHHHhHheeEEee
Confidence            3456799999999999999999999888888773211             112788999999999999998876654

>KOG3626|consensus

Probab=98.84  E-value=2e-07  Score=98.47  Aligned_cols=181  Identities=15%  Similarity=0.187  Sum_probs=116.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccCCchH
Q psy13668         19 QSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTS   98 (513)
Q Consensus        19 ~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~   98 (513)
                      +..+|+.++...+|+++|.++++.+...+.++.                    .  .+.+  +.+-.-.|    ...|..
T Consensus       272 plYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~--------------------~--~~~~--it~~DPrW----IGAWWl  323 (735)
T KOG3626|consen  272 PLYLGILYSMAILGPAIGFLLGSFCLKLYVDFG--------------------L--SPIG--ITPTDPRW----IGAWWL  323 (735)
T ss_pred             cHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccc--------------------c--CCCC--CCCCCcch----hhHHHH
Confidence            344999999999999999999998877652321                    0  0000  00000000    013666


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccC------CCCCCchhhhccchhHHHHHHHHHH
Q psy13668         99 VFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQ------NLPPTPWGKIATSAPVIGLIIAQIG  172 (513)
Q Consensus        99 ~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~l~~~~  172 (513)
                      -|++.|.+.++..+..+++-++.|++.++......+..+++.+...+..      ++-+...+++++|+.+....+...+
T Consensus       324 GFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~  403 (735)
T KOG3626|consen  324 GFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVI  403 (735)
T ss_pred             HHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence            6777888887777777777556554332110000000000100000000      0112345788999999999999999


Q ss_pred             HHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH-HHHHHHHhhhhhcCCCccc
Q psy13668        173 HDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR-SVIVTYKMRTILSGPRLTS  227 (513)
Q Consensus       173 ~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~  227 (513)
                      ....+.++.+++|.|++..++.++..+.++.....+ +..+|.+++|++..|+.-+
T Consensus       404 ~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~  459 (735)
T KOG3626|consen  404 ESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS  459 (735)
T ss_pred             HHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence            999999999999999999999999999988855554 6678999999999997643

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=98.83  E-value=3.8e-08  Score=103.06  Aligned_cols=115  Identities=10%  Similarity=-0.050  Sum_probs=82.7

Q ss_pred             CcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC--------Chh--HHHH-HHHHHH
Q psy13668        193 HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG--------CNR--LAVT-VSFTLG  261 (513)
Q Consensus       193 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~--~~~~-~~~~~~  261 (513)
                      +.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.+......        .+.  ...+ ..=.+.
T Consensus        51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~  130 (479)
T PRK10077         51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIG  130 (479)
T ss_pred             cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHH
Confidence            78888999999999999999999999999999999999988887777665554321        111  1111 111222


Q ss_pred             HHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        262 MGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      ....+...+.......|..| ++||.+.++.+....+|..+++.+.+
T Consensus       131 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~  177 (479)
T PRK10077        131 GIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNY  177 (479)
T ss_pred             hhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            22344555556666777775 67999999999888888887765544

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.82  E-value=8.6e-08  Score=100.28  Aligned_cols=139  Identities=14%  Similarity=0.059  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC----Ccc-cchhhHhhHHHHHHHH
Q psy13668        168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP----RLT-SPFDFSASVGPGLGIL  242 (513)
Q Consensus       168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~-~~~~~~~~~~~~~~~~  242 (513)
                      +..+..+.....+..|++.|+.|.+|+|+...+.+....-+...+..++.|+++||    +|| |+++..+....+++..
T Consensus        13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~   92 (473)
T PRK10429         13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF   92 (473)
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence            34444455566677889999999999999999999999999999999999999995    577 5566667666666665


Q ss_pred             HHHhcCCh--hH---HHHHHHHHHHHHHhhhhhhHHHhhcccC--cchhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668        243 AASYSGCN--RL---AVTVSFTLGMGTMGAFLPSLKVNALDLS--PNYAGTLMALVGGIGALSGTVSPYLV  306 (513)
Q Consensus       243 ~l~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~g~~~gi~~~~~~i~~~igp~l~  306 (513)
                      ++...+..  ..   ...+...+...+......++.+...++.  +++|...++.-....++++.+.+.+.
T Consensus        93 llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~  163 (473)
T PRK10429         93 LLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFT  163 (473)
T ss_pred             HHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55443321  11   1111112222233344455666777776  56788888886666676655554443

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=98.81  E-value=3.3e-08  Score=100.40  Aligned_cols=141  Identities=12%  Similarity=-0.004  Sum_probs=89.5

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH-hhHHHHHHHHHHHhcC
Q psy13668        170 QIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS-ASVGPGLGILAASYSG  248 (513)
Q Consensus       170 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~~l~~~~  248 (513)
                      +++...+...+..++|.|++| +|.|..+.++..+...+...++.++.|.+.||.+|++...- ..+...+.........
T Consensus        13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~   91 (382)
T PRK11128         13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGA   91 (382)
T ss_pred             HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence            444445556677788999977 69999999999999999999999999999999998532211 1111111122222222


Q ss_pred             ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        249 CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      ++.+.......+.....+...+.......+. .++++.+.+.....+++|..++|.+.+.+.+.
T Consensus        92 ~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~  154 (382)
T PRK11128         92 HSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW  154 (382)
T ss_pred             ccHHHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333332222211222233333333333333 45677888888888899999999999988764

>PTZ00207 hypothetical protein; Provisional

Probab=98.80  E-value=4.8e-06  Score=87.97  Aligned_cols=137  Identities=9%  Similarity=-0.064  Sum_probs=83.6

Q ss_pred             chhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh--hhHHhchhHHHHHHHHHhhhhhcCCCcccc--
Q psy13668        153 PWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS--VDLISGWPNRSVIVTYKMRTILSGPRLTSP--  228 (513)
Q Consensus       153 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~--~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~--  228 (513)
                      ++++.+++..+|++++.+++.......+...+....+..-|.+.++  ..++.+...+.+.+|++..|+++....+|+  
T Consensus       345 t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~  424 (591)
T PTZ00207        345 TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAE  424 (591)
T ss_pred             hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccc
Confidence            6778888999999999999998888888888877776643773333  333788999999999999999882211111  


Q ss_pred             --h-----hhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHH
Q psy13668        229 --F-----DFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALV  291 (513)
Q Consensus       229 --~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~  291 (513)
                        +     +.+..+ +.++.+++..........+..+ +...+.|...+.......+++.++-|+-.-+.
T Consensus       425 ~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~-lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~  492 (591)
T PTZ00207        425 DRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYF-IAAFANGFMAATIALVTRTIFAKDPAKHYNFC  492 (591)
T ss_pred             cccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHH-HHHHHhhHhHHHHHHHHHHHhccchHHHhhHH
Confidence              1     222222 3333333333222122222222 22334566666666667776666666554433

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=98.80  E-value=6.3e-06  Score=86.72  Aligned_cols=136  Identities=9%  Similarity=-0.053  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHh--cCcchh------hhhHHhchhHHHHHHHHHhh----hhhcCCCcccchhhHhhHHH
Q psy13668        170 QIGHDFGLFTIVTDLPKYMKDV--LHFSIT------SVDLISGWPNRSVIVTYKMR----TILSGPRLTSPFDFSASVGP  237 (513)
Q Consensus       170 ~~~~~~~~~~~~~~lp~~l~~~--~g~s~~------~~~~~~~~~~~~~~ig~~~~----g~l~dr~~~~~~~~~~~~~~  237 (513)
                      .++....+|......|.++.+.  .+.+..      ..+.+.+...+..++..++.    +++.||.+..+....+++..
T Consensus       281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~  360 (500)
T PRK09584        281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLC  360 (500)
T ss_pred             HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHH
Confidence            4455566777777777776641  222211      13344445554444554444    66666666666677778877


Q ss_pred             HHHHHHHHhcCC--------hhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHH
Q psy13668        238 GLGILAASYSGC--------NRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYL  305 (513)
Q Consensus       238 ~~~~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l  305 (513)
                      +++.+.+.....        +.++.+....+....-....|.......+..| +.||+.+|+......+++.++..+
T Consensus       361 ~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~  437 (500)
T PRK09584        361 SGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYV  437 (500)
T ss_pred             HHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777766544322        12233333333333345555666666767776 569999997666655555555433

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=98.78  E-value=6.9e-08  Score=101.02  Aligned_cols=152  Identities=13%  Similarity=0.044  Sum_probs=119.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC-CcccchhhHhhHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP-RLTSPFDFSASVGPGL  239 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~  239 (513)
                      +.++..++..+.-..++|+...+++.|+++.+|++..++............+..+++|+++|| +|||+....+.+...+
T Consensus        14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~   93 (489)
T PRK10207         14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI   93 (489)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence            457777888888889999999999999999999999999888888888888888899999999 9999999999999988


Q ss_pred             HHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-c--hhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        240 GILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-N--YAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~--~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      +.+.+...............+...+.+...+.......|.+| +  +|+.+.++.+...++|+.++|.+.+.+.+.
T Consensus        94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~  169 (489)
T PRK10207         94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK  169 (489)
T ss_pred             HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            887777654433222222222223345555666667777664 3  357789999999999999999999988764

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=98.77  E-value=2.1e-07  Score=97.36  Aligned_cols=139  Identities=14%  Similarity=0.104  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc
Q psy13668        168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS  247 (513)
Q Consensus       168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~  247 (513)
                      ...++.....+......|.+ ++.+|+|..+.+...+...++..++.++.|+++||+|||+....+.+..+++.++..+.
T Consensus        43 ~~~~~~~~~~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~  121 (476)
T PLN00028         43 ISFFTCFVSTFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV  121 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh
Confidence            33344444444444445544 56689999999999888889999999999999999999999888887777777766665


Q ss_pred             CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        248 GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      .+.....+..+..+++... ..+ ......+..| ++||.++|+.+...++++.+++.+.+.+
T Consensus       122 ~s~~~l~~~r~l~G~~~~~-~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i  182 (476)
T PLN00028        122 SSATGFIAVRFFIGFSLAT-FVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV  182 (476)
T ss_pred             cCHHHHHHHHHHHHHHHHh-hHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5443333333333433322 222 2334456664 6799999999888888777776655433

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=98.77  E-value=1.2e-07  Score=94.57  Aligned_cols=144  Identities=19%  Similarity=0.140  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc
Q psy13668        168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS  247 (513)
Q Consensus       168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~  247 (513)
                      +..++...........+|.++.+.+|.|..+.+++.+...++..++.+..|+++||+|||+....+.++.+++.+...+.
T Consensus         3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~   82 (352)
T PF07690_consen    3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA   82 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence            44555556666666777767788899999999999999999999999999999999999999888888888884444443


Q ss_pred             CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        248 GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      ++.+ .......+.....+...+.......|..| ++|+.+.++.+...+++..++|.+.+.+.+.
T Consensus        83 ~~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~  147 (352)
T PF07690_consen   83 SNFW-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY  147 (352)
T ss_dssp             CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred             hhHH-HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc
Confidence            3333 33333333233345666667777777776 5899999999999999999999999998854

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=98.75  E-value=3e-07  Score=94.04  Aligned_cols=141  Identities=13%  Similarity=-0.040  Sum_probs=99.5

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-----cccc-hhhHhhHHHHHHH
Q psy13668        168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-----LTSP-FDFSASVGPGLGI  241 (513)
Q Consensus       168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~-~~~~~~~~~~~~~  241 (513)
                      ..++.+.........-+|.|+++. |+|.++.|++......  .+..++.|.++||+     |||| ++..+.++.++++
T Consensus         6 ~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~   82 (402)
T PRK11902          6 LLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI   82 (402)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence            344555566666777899999986 9999999998666654  58889999999999     7765 6777777777666


Q ss_pred             HHHHhcCC-h-hHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        242 LAASYSGC-N-RLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       242 ~~l~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ..+.+.+. . .+.......+...+.....+.......+..| ++|+.+.++......++..+++.+.+.+.+
T Consensus        83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~  155 (402)
T PRK11902         83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD  155 (402)
T ss_pred             HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence            66665533 2 2222222222223444555666677777775 559999999998888999998888777765

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=98.74  E-value=2.3e-06  Score=84.60  Aligned_cols=158  Identities=17%  Similarity=0.208  Sum_probs=113.4

Q ss_pred             chhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcC-CCcccchhh
Q psy13668        153 PWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSG-PRLTSPFDF  231 (513)
Q Consensus       153 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d-r~~~~~~~~  231 (513)
                      .++++..+|+....+...+....+++.=-..+-+|--+.+|+|..+...+......+.++|....|++.. |.++++...
T Consensus       200 a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~  279 (403)
T PF03209_consen  200 AWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAA  279 (403)
T ss_pred             HHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHH
Confidence            3466667777766666666666666655556777888899999999999999999999999999998777 566777777


Q ss_pred             HhhHHHHHHHHHHHhc---CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        232 SASVGPGLGILAASYS---GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       232 ~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      .++...++++.++...   .+........+.++++ .+.........+.++. +++.|+..|.-...+.++..++..+.|
T Consensus       280 ~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g-~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG  358 (403)
T PF03209_consen  280 LGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLG-NGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGG  358 (403)
T ss_pred             HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHh-hhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            7777777766555443   2222233333334333 3344444455555665 688999999999999999999998888


Q ss_pred             Hhcc
Q psy13668        308 VLTP  311 (513)
Q Consensus       308 ~l~~  311 (513)
                      .+.|
T Consensus       359 ~~~D  362 (403)
T PF03209_consen  359 ALRD  362 (403)
T ss_pred             HHHH
Confidence            7776

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=98.73  E-value=3.7e-07  Score=94.39  Aligned_cols=136  Identities=6%  Similarity=-0.067  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhcC---cchhh---hhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668        168 IAQIGHDFGLFTIVTDLPKYMKDVLH---FSITS---VDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI  241 (513)
Q Consensus       168 l~~~~~~~~~~~~~~~lp~~l~~~~g---~s~~~---~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~  241 (513)
                      +..++...-...+ .....++.+.++   .+..+   .+.......++..+|.++.|+++||+|||+.+..+.+..+++.
T Consensus        29 ~~~~~~~~d~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~  107 (432)
T PRK10406         29 SGNLVEWFDFYVY-SFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGS  107 (432)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence            3344434444443 344445555553   44443   3344455566777999999999999999999999999888888


Q ss_pred             HHHHhcCChhH--------HHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668        242 LAASYSGCNRL--------AVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYL  305 (513)
Q Consensus       242 ~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l  305 (513)
                      +...+.++-..        ..+.-+..+.+ .+...+.......|.. +++||...++.+.....|..+++.+
T Consensus       108 ~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g-~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~  179 (432)
T PRK10406        108 LVIACLPGYETIGTWAPALLLLARLFQGLS-VGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV  179 (432)
T ss_pred             HHHhhcCCchhHHHHHHHHHHHHHHHHHhh-hhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence            87766553211        11122223322 3445555666667766 5779999888777666666665544

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=98.70  E-value=1.6e-07  Score=95.38  Aligned_cols=83  Identities=17%  Similarity=0.117  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCc-ccchhhHhhHHHHHHHHHH
Q psy13668        166 LIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRL-TSPFDFSASVGPGLGILAA  244 (513)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~-~~~~~~~~~~~~~~~~~~l  244 (513)
                      +...+++....+-.+..++|.|+++. |+|..|+|.+.+...+..+++.++.|+++||.+ +|+.+....+..++.....
T Consensus         7 Ls~~~f~~f~~~G~~~p~~~~~L~~~-G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~   85 (400)
T PF03825_consen    7 LSLMYFLYFFAYGAFLPYLPLYLESR-GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL   85 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence            34445555566666777899999885 899999999999999999999999999999976 4566666666666655555


Q ss_pred             HhcCC
Q psy13668        245 SYSGC  249 (513)
Q Consensus       245 ~~~~~  249 (513)
                      ....+
T Consensus        86 ~~~~~   90 (400)
T PF03825_consen   86 AFSSS   90 (400)
T ss_pred             HHhcc
Confidence            44444

>KOG2563|consensus

Probab=98.62  E-value=1.6e-07  Score=92.99  Aligned_cols=166  Identities=11%  Similarity=0.032  Sum_probs=105.8

Q ss_pred             hhhhhh--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q psy13668         10 MLHRLV--NEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSG   87 (513)
Q Consensus        10 ~~~~~~--~~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   87 (513)
                      +...||  +||..+..+...++++|.+++-++...|+..-..                                      
T Consensus       164 iA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~--------------------------------------  205 (480)
T KOG2563|consen  164 IAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKD--------------------------------------  205 (480)
T ss_pred             HHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCC--------------------------------------
Confidence            445677  3666666666666677777666666555443200                                      


Q ss_pred             HHHhccCCchH--HHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHH
Q psy13668         88 LLIRYLGGWTS--VFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIG  165 (513)
Q Consensus        88 ~l~~~~~gWr~--~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  165 (513)
                        .+.. .|..  .|+..+.++.+.+.+..+..+++|...|..       .+...+     ...-..+.++.+++++|..
T Consensus       206 --~~~~-~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~-------s~~~~~-----~~~f~~si~~~~~n~~F~i  270 (480)
T KOG2563|consen  206 --SEDN-SWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSA-------SQAALQ-----DASFPKSIKSCFKNRQFII  270 (480)
T ss_pred             --cchh-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCch-------hHhhhh-----cCcHHHHHHHHHcCccHHH
Confidence              0112 4544  344444444444444455555555443333       221111     0112234578899999999


Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccch
Q psy13668        166 LIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPF  229 (513)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~  229 (513)
                      ..+.+.+....+++..+.+-.-+.. .|++...+|.......+++++|+...|.+.||.+.-+.
T Consensus       271 l~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~  333 (480)
T KOG2563|consen  271 LAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKL  333 (480)
T ss_pred             HHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence            9999888888888887777655554 48888889999999999999999999999999775443

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=98.62  E-value=8.7e-07  Score=90.24  Aligned_cols=147  Identities=8%  Similarity=-0.164  Sum_probs=88.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHH--hchhHHHHHHHHHhh-hhhcCCCcccchhhHhhHH-HHH
Q psy13668        164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLI--SGWPNRSVIVTYKMR-TILSGPRLTSPFDFSASVG-PGL  239 (513)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~--~~~~~~~~~ig~~~~-g~l~dr~~~~~~~~~~~~~-~~~  239 (513)
                      ......++.+...+......+|.|++|. |+|..+.|++  ...+.....+..++. ++.+||.||||..+..... ...
T Consensus         4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~-g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~   82 (390)
T TIGR02718         4 ITLGLLYLSQGIPIGLAMDALPTLLRED-GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA   82 (390)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence            3445566677777777788999999886 9999999997  456677887777777 6689999988876544432 222


Q ss_pred             HHHHHHhc-CC-h-hHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        240 GILAASYS-GC-N-RLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       240 ~~~~l~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      +...+... .. . ..+.+........+.....+.......+.. +++++...+.......+|..+++.+.+.+.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~  158 (390)
T TIGR02718        83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG  158 (390)
T ss_pred             HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            23333322 11 1 112222222221222233333333333333 4456777777777777888888876666655

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK03893 putative sialic acid transporter; Provisional

Probab=98.62  E-value=1e-06  Score=92.70  Aligned_cols=148  Identities=10%  Similarity=0.029  Sum_probs=106.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL  242 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  242 (513)
                      +...++..+.............|.+ .+.+|.|..+.+.+.+...++..++.+..|+++||+|||+....+.++.+++.+
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~  100 (496)
T PRK03893         22 FSAAWLGYLLDGFDFVLITLVLTEV-QGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTL  100 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence            3445555555555555555556554 566899999999999999999999999999999999999998888888877777


Q ss_pred             HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .+.+..+........+..+++ .+...+.......+.. +++|+.+.++.+....++..++|.+.+.+.+.
T Consensus       101 ~~~~~~~~~~l~~~~~l~G~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~  170 (496)
T PRK03893        101 ACGFAPGYWTLFIARLVIGMG-MAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV  170 (496)
T ss_pred             HHHHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            766654333333333333332 3334444445555665 56799999999999999999999999887763

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.59  E-value=9.4e-07  Score=85.29  Aligned_cols=124  Identities=15%  Similarity=0.034  Sum_probs=94.3

Q ss_pred             HHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhh
Q psy13668        188 MKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGA  267 (513)
Q Consensus       188 l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  267 (513)
                      +++.+|+|...++++++.+.++....++...++.+|++.++.+..+++..+++..+-...+ ........... ....+.
T Consensus        38 Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~-~~~L~~gt~l~-G~gIav  115 (395)
T COG2807          38 IRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGG-LPLLFLGTLLA-GAGIAV  115 (395)
T ss_pred             HHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHH-HhhHHH
Confidence            4566899999999999999999999999999999999999999999998888888776662 22222111111 112233


Q ss_pred             hhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668        268 FLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       268 ~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      ..........+-+|++.+..+|++.+..++++++++.+.--+.++.
T Consensus       116 ~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~  161 (395)
T COG2807         116 INVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS  161 (395)
T ss_pred             HHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh
Confidence            3444567788888999999999999999998888877766555433

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=98.59  E-value=4.6e-11  Score=124.16  Aligned_cols=286  Identities=14%  Similarity=0.083  Sum_probs=152.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHH--------------hhh-----------
Q psy13668         21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFA--------------TGA-----------   75 (513)
Q Consensus        21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~--------------~~~-----------   75 (513)
                      ..+...+...+|..+|.++.|.+.|++ |+|.++.+...+..+-.++..+..              .|.           
T Consensus        47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~  125 (451)
T PF00083_consen   47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI  125 (451)
T ss_pred             HHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            367788889999999999999999999 999888754322211111000000              000           


Q ss_pred             ----------------------hhHHHHHHHHHHHHHhcc--CCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668         76 ----------------------QIGNVVSMAVSGLLIRYL--GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY  131 (513)
Q Consensus        76 ----------------------~~g~~~~~~~~~~l~~~~--~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  131 (513)
                                            .+|..++..+........  .+||..+.+..+++++..+. .+++||.|...-...+.
T Consensus       126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~-~~~~pESP~wL~~~~~~  204 (451)
T PF00083_consen  126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLL-RFFLPESPRWLLSKGRD  204 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccceecccccc
Confidence                                  122222222222111111  15999998877777655433 35678877432111000


Q ss_pred             cc---cccc--------cchhhhhcc-CC--CCCCchhhhccchh----HHHHHHHHHHHHHHH-HHHHhhHHHHHHHhc
Q psy13668        132 GT---AVMH--------KSNRFIFSF-QN--LPPTPWGKIATSAP----VIGLIIAQIGHDFGL-FTIVTDLPKYMKDVL  192 (513)
Q Consensus       132 ~~---~~~~--------~~~~~~~~~-~~--~~~~~~~~~l~~~~----~~~~~l~~~~~~~~~-~~~~~~lp~~l~~~~  192 (513)
                      .+   ..++        ++.+...+. ++  ..+..++++++++.    ............... +....+.|.+++ ..
T Consensus       205 ~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~-~~  283 (451)
T PF00083_consen  205 EEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE-NA  283 (451)
T ss_pred             cccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccc-cc
Confidence            00   0000        000000000 00  01134566666533    222222222222222 333444555544 34


Q ss_pred             CcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHH---hc-CCh----hHHHHHHHHH-HHH
Q psy13668        193 HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAAS---YS-GCN----RLAVTVSFTL-GMG  263 (513)
Q Consensus       193 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~---~~-~~~----~~~~~~~~~~-~~~  263 (513)
                      +.+..  -.......+...++.+.+.++.||+|||+....+..+.+++...+.   .. ...    ....+....+ ...
T Consensus       284 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~  361 (451)
T PF00083_consen  284 GISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAF  361 (451)
T ss_pred             ccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccc
Confidence            66555  3333445566677778888999999999998888887777666553   11 111    1111111111 122


Q ss_pred             HHhhhhhhHHHhhcccCcc-hhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        264 TMGAFLPSLKVNALDLSPN-YAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       264 ~~~~~~~~~~~~~~~~~p~-~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      +.....+.......|++|. .|+++.|+.+..+.+++.++|.+...+.+
T Consensus       362 ~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~  410 (451)
T PF00083_consen  362 FSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN  410 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            2223344555777888875 59999999999999999988877655554

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>TIGR00806 rfc RFC reduced folate carrier

Probab=98.57  E-value=2.5e-05  Score=79.35  Aligned_cols=273  Identities=11%  Similarity=0.002  Sum_probs=144.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH----------------------------------
Q psy13668         21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA----------------------------------   66 (513)
Q Consensus        21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~----------------------------------   66 (513)
                      ..+...+.+..|.++..+.+|+++||+ |-|+++...++...+...                                  
T Consensus        63 v~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~  141 (511)
T TIGR00806        63 VTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFS  141 (511)
T ss_pred             hcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            367888899999999999999999999 777776643322211110                                  


Q ss_pred             ---------HHHHHHhhhhhHHHHHHHHHHHHHhccCCchHHHHH--HHHHHHHHHHHHHHhccCCCCC---ccchhccc
Q psy13668         67 ---------LWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYV--FGAVGLAWFALWMTFASSDPSE---STHYVAYG  132 (513)
Q Consensus        67 ---------~~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i--~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~  132 (513)
                               .......+.++|.++++++++. ...+ |||+-+..  +.+....+++++-+++|..++.   ++......
T Consensus       142 WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~-gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~  219 (511)
T TIGR00806       142 LVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTL-GWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRG  219 (511)
T ss_pred             HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhc-CchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhcccccccc
Confidence                     0112333446888999999888 5566 99986654  4555555666666777732221   00000000


Q ss_pred             ccccccchhhhhcc-CCC---C----------CCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh
Q psy13668        133 TAVMHKSNRFIFSF-QNL---P----------PTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS  198 (513)
Q Consensus       133 ~~~~~~~~~~~~~~-~~~---~----------~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~  198 (513)
                      ....+.+.....+. .+.   +          ...+++..+|+.+..-.+=..+..++++-+.+|......+...-...-
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~y  299 (511)
T TIGR00806       220 ALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKY  299 (511)
T ss_pred             ccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCcccc
Confidence            00000000000000 000   0          012233456666555555556667777778878777776553322224


Q ss_pred             hhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHH--HHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhh-HHHh
Q psy13668        199 VDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGP--GLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPS-LKVN  275 (513)
Q Consensus       199 ~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  275 (513)
                      .|..-....+.+.+..+..|++-.++.+-..+..+.+..  +.+++++.+. .+.+......++......+..+. ....
T Consensus       300 NG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t-~~Iw~~Y~~yvlf~~~y~flitia~~~i  378 (511)
T TIGR00806       300 NGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQS-HDIWVLYVTYVLFRGIYQFLVPIATFQI  378 (511)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            566666777788888999999877664322333333222  2222223232 23333323222222222333332 3344


Q ss_pred             hcccCcchhHHHHHHHHHHHhH
Q psy13668        276 ALDLSPNYAGTLMALVGGIGAL  297 (513)
Q Consensus       276 ~~~~~p~~~g~~~gi~~~~~~i  297 (513)
                      ...+..+.-|...|++++..-+
T Consensus       379 A~~L~~~~~aLvFGiNtfvAl~  400 (511)
T TIGR00806       379 ASSLSKELCALVFGINTFVATA  400 (511)
T ss_pred             HHHhcccceEEEEecHHHHHHH
Confidence            4455556678888888777544

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PRK09848 glucuronide transporter; Provisional

Probab=98.57  E-value=8.5e-07  Score=92.14  Aligned_cols=73  Identities=8%  Similarity=-0.074  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC----cccc-hhhHhhHHHHHHH
Q psy13668        169 AQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR----LTSP-FDFSASVGPGLGI  241 (513)
Q Consensus       169 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~----~~~~-~~~~~~~~~~~~~  241 (513)
                      ..+..+........+++.|+++..|+++.+.|.+..+..+...+..++.|+++||.    |||+ .+..+.+...+..
T Consensus        16 g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~   93 (448)
T PRK09848         16 GDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFS   93 (448)
T ss_pred             chHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHH
Confidence            33334444455566778899999999999999999999999999999999999996    5555 3344444344333

>PRK15075 citrate-proton symporter; Provisional

Probab=98.57  E-value=1.5e-06  Score=89.97  Aligned_cols=145  Identities=8%  Similarity=-0.039  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhH-Hhchh-----HHHHHHHHHhhhhhcCCCcccchhhHhhHH
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDL-ISGWP-----NRSVIVTYKMRTILSGPRLTSPFDFSASVG  236 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~-~~~~~-----~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~  236 (513)
                      ....++..++...-...+....|...+ .++.+..+.+. ..+..     .+...++.+..|+++||+|||+....+.+.
T Consensus        17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~   95 (434)
T PRK15075         17 ILRVTSGNFLEMFDFFLFGFYATAIAK-TFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI   95 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence            444555666666666666667775554 56877666433 22221     223357889999999999999999999988


Q ss_pred             HHHHHHHHHhcCChhHH--------HHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        237 PGLGILAASYSGCNRLA--------VTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       237 ~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      ..++..+..+.++....        .+..+..+.+ .+...+.......|..| ++||.+.++.+...+++..+++.+.+
T Consensus        96 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~-~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~  174 (434)
T PRK15075         96 MASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFS-AGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGY  174 (434)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhcc-ccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888877776543211        1111222222 23334444556667764 67999999988887777766666555


Q ss_pred             Hh
Q psy13668        308 VL  309 (513)
Q Consensus       308 ~l  309 (513)
                      .+
T Consensus       175 ~l  176 (434)
T PRK15075        175 LL  176 (434)
T ss_pred             HH
Confidence            43

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=98.53  E-value=2e-06  Score=88.23  Aligned_cols=149  Identities=11%  Similarity=0.035  Sum_probs=105.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668        162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI  241 (513)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~  241 (513)
                      +++..+...+............+|.+ ++.+|+|..+.+++.+...++..++++..|++.||+|||+....+.++.+++.
T Consensus         4 ~~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~   82 (410)
T TIGR00885         4 PFALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA   82 (410)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence            34445555554444443344556555 77889999999999999999999999999999999999999999999888887


Q ss_pred             HHHHhcC--ChhHHHHH-HHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        242 LAASYSG--CNRLAVTV-SFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       242 ~~l~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .+.....  .+....+. .+..+.+ .+...+.......+.. ++++++..++.+...++|..++|.+.+.+...
T Consensus        83 ~l~~~~~~~~~~~~~l~~~~l~G~g-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~  156 (410)
T TIGR00885        83 FLFWPAAEIMNYTLFLVGLFILTAG-LGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS  156 (410)
T ss_pred             HHHHHHHhhccHHHHHHHHHHHHhh-HHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            7654432  23332222 2333333 3344443344444444 46799999999999999999999999887643

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>TIGR00806 rfc RFC reduced folate carrier

Probab=98.52  E-value=1.9e-06  Score=87.29  Aligned_cols=131  Identities=11%  Similarity=-0.059  Sum_probs=105.1

Q ss_pred             HHHhhHHHHHHHhcCcchhh-hhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHH
Q psy13668        179 TIVTDLPKYMKDVLHFSITS-VDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVS  257 (513)
Q Consensus       179 ~~~~~lp~~l~~~~g~s~~~-~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  257 (513)
                      .-..+...++.+.+|+|..+ .+.+......+..+..+.+|+++||+|.|+++..+.+.-.+...++.+..+-....+.-
T Consensus        43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R  122 (511)
T TIGR00806        43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLME  122 (511)
T ss_pred             chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445556777789999999 99999999999999999999999999999999999998888888888765544444444


Q ss_pred             HHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        258 FTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                      +..|.+-.... +.......-+++++|++++|+.+....+|.++++.+.+.+.
T Consensus       123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~  174 (511)
T TIGR00806       123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV  174 (511)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55555544444 44445555556788999999999999999999999999844

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>KOG3764|consensus

Probab=98.52  E-value=6.5e-07  Score=87.19  Aligned_cols=118  Identities=14%  Similarity=0.036  Sum_probs=92.1

Q ss_pred             CcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhH
Q psy13668        193 HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSL  272 (513)
Q Consensus       193 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (513)
                      +-+.++.|++.....+.+++.+++.|.+.||+|+|..++++++.+....+++.+..+-+...+.-..=+.+.. .....-
T Consensus       102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA-~~~tsg  180 (464)
T KOG3764|consen  102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSA-FADTSG  180 (464)
T ss_pred             cccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHH-HHHhhh
Confidence            4456789999999999999999999999999999999999999999999888887665533333222222222 223333


Q ss_pred             HHhhcccCcc--hhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        273 KVNALDLSPN--YAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       273 ~~~~~~~~p~--~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .....|.+|+  +||.++|+.-.+..+|..+||.+.|.+.+
T Consensus       181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe  221 (464)
T KOG3764|consen  181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE  221 (464)
T ss_pred             HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh
Confidence            4555666664  38999999999999999999999999887

>PRK09669 putative symporter YagG; Provisional

Probab=98.50  E-value=1.5e-06  Score=90.16  Aligned_cols=135  Identities=13%  Similarity=0.046  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC----Cccc-chhhHhhHHHHHHHHHHH
Q psy13668        171 IGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP----RLTS-PFDFSASVGPGLGILAAS  245 (513)
Q Consensus       171 ~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~~-~~~~~~~~~~~~~~~~l~  245 (513)
                      +..+.....+..+++.|+.|.+|+|+...+.+....-+...+..++.|+++||    +||| +.+..+.+..+++..++.
T Consensus        19 ~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f   98 (444)
T PRK09669         19 TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTF   98 (444)
T ss_pred             hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence            34444455667789999999999999999999999999999999999999999    5554 555566566656555544


Q ss_pred             hcCCh--h---HHHHHHHHHHHHHHhhhhhhHHHhhcccC--cchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668        246 YSGCN--R---LAVTVSFTLGMGTMGAFLPSLKVNALDLS--PNYAGTLMALVGGIGALSGTVSPYL  305 (513)
Q Consensus       246 ~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~g~~~gi~~~~~~i~~~igp~l  305 (513)
                      ..+..  .   ........+..........++.+...+..  +++|....+.-....++|+.+++.+
T Consensus        99 ~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~  165 (444)
T PRK09669         99 YTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVI  165 (444)
T ss_pred             hCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44321  1   11111111112222334445556666665  4678888777777777776666554

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=98.48  E-value=3.1e-06  Score=82.95  Aligned_cols=128  Identities=15%  Similarity=0.057  Sum_probs=97.5

Q ss_pred             hHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh---HHHHHHHH
Q psy13668        183 DLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR---LAVTVSFT  259 (513)
Q Consensus       183 ~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~  259 (513)
                      -+-+.+++.++++..+++++......+-.++++..+++.+|+++|+-+..++.+.++++.++.-.....   .....++.
T Consensus        34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFi  113 (422)
T COG0738          34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFI  113 (422)
T ss_pred             hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Confidence            455667889999999999999999999999999999999999999999999999999988876433322   22222233


Q ss_pred             HHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        260 LGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ++.+. +..-......+..+. |+.......+.+.+..+|++++|.+.+.++.
T Consensus       114 la~Gi-~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil  165 (422)
T COG0738         114 LASGI-GLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL  165 (422)
T ss_pred             HHhhh-HHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence            33332 222233334444455 4568888999999999999999999998876

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=98.48  E-value=1.5e-06  Score=90.46  Aligned_cols=131  Identities=12%  Similarity=0.013  Sum_probs=95.0

Q ss_pred             HHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHH-H
Q psy13668        180 IVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVS-F  258 (513)
Q Consensus       180 ~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~  258 (513)
                      +..+.|.+. +.+|.+..+.++..+...+...++.++.|+++||++||+.+..+.+...++.+...+.++........ +
T Consensus        38 ~~~~~~~i~-~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  116 (455)
T TIGR00892        38 VTVFFKELQ-QIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGF  116 (455)
T ss_pred             hhhhHHHHH-HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            445566654 45799999999999999888899999999999999999998888877777766665544322222111 2


Q ss_pred             HHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        259 TLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      ..+.+.. ...+.......+..+++|+.+.|+.+....++..++|.+.+.+.+.
T Consensus       117 l~G~~~~-~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~  169 (455)
T TIGR00892       117 ITGLGLA-FNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFES  169 (455)
T ss_pred             HHHhcch-hhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence            2222222 2223333455566688899999999999999999999999888774

>PTZ00207 hypothetical protein; Provisional

Probab=98.43  E-value=5.9e-06  Score=87.31  Aligned_cols=137  Identities=11%  Similarity=-0.040  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC--
Q psy13668        172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGC--  249 (513)
Q Consensus       172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~--  249 (513)
                      .+....|++..+.|. +++.+|+|..+.+.+....... ....+..|++.||+|+|++..++.+...++.+......+  
T Consensus        38 ~~~g~~y~fsv~s~~-L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~  115 (591)
T PTZ00207         38 ICTSFMYAFNLISGA-MQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEV  115 (591)
T ss_pred             HHHHHHHHHHHHHHH-HHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            334455666666665 5677899999988887663333 345667899999999999999999999998887776521  


Q ss_pred             ---hhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        250 ---NRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       250 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                         +.+...+...+.....+...+.......+.+|++||.+.|+......+|+++.+.+...+.
T Consensus       116 i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~  179 (591)
T PTZ00207        116 IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFF  179 (591)
T ss_pred             ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               2222222222222223333344455556678999999999999999999987555554443

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.42  E-value=3.6e-06  Score=86.93  Aligned_cols=139  Identities=14%  Similarity=0.042  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcC----CCccc-chhhHhhHHHHHHHHHHHh
Q psy13668        172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSG----PRLTS-PFDFSASVGPGLGILAASY  246 (513)
Q Consensus       172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d----r~~~~-~~~~~~~~~~~~~~~~l~~  246 (513)
                      ...........+++.|+.|..|+++...+++....-+...+..++.|.++|    |+||| +.+..+....+++..++..
T Consensus        12 ~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~   91 (428)
T PF13347_consen   12 GYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFS   91 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhc
Confidence            334444556678899999999999999999999999999999999999999    67755 5566777788887777776


Q ss_pred             c-CChh------HHHHHHHHHHHHHHhhhhhhHHHhhcccCc--chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        247 S-GCNR------LAVTVSFTLGMGTMGAFLPSLKVNALDLSP--NYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       247 ~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                      . +...      ........+...+......++.+...|+.+  ++|....+.-.....+|..+...+.+.+.
T Consensus        92 ~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~  164 (428)
T PF13347_consen   92 PPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILV  164 (428)
T ss_pred             cccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            5 3111      111222222223334444556777778874  56999999888888888766655555554

>KOG1330|consensus

Probab=98.41  E-value=7.9e-07  Score=88.41  Aligned_cols=55  Identities=7%  Similarity=-0.041  Sum_probs=47.0

Q ss_pred             HHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668        188 MKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL  242 (513)
Q Consensus       188 l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~  242 (513)
                      .++.+|.+....|++.....+...+.++++|++.||++||+++..+..+-.++.+
T Consensus        59 v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~  113 (493)
T KOG1330|consen   59 VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVF  113 (493)
T ss_pred             HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHH
Confidence            4566889999999999999999999999999999999999998876665444433

>TIGR00883 2A0106 metabolite-proton symporter

Probab=98.40  E-value=2.1e-06  Score=86.86  Aligned_cols=101  Identities=9%  Similarity=-0.050  Sum_probs=67.4

Q ss_pred             HHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHH------HHHHHHHHHH-HHhhhhhhHHHhhcccC
Q psy13668        208 RSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLA------VTVSFTLGMG-TMGAFLPSLKVNALDLS  280 (513)
Q Consensus       208 ~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~  280 (513)
                      +...++.++.|+++||+|||+....+.+...++.......++....      .+...-+..+ ..+...+.......|..
T Consensus        46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~  125 (394)
T TIGR00883        46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA  125 (394)
T ss_pred             HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC
Confidence            3345788999999999999999999888888887777766543211      1111111111 12233344455566666


Q ss_pred             -cchhHHHHHHHHHHHhHHhhHHHHHHHH
Q psy13668        281 -PNYAGTLMALVGGIGALSGTVSPYLVGV  308 (513)
Q Consensus       281 -p~~~g~~~gi~~~~~~i~~~igp~l~g~  308 (513)
                       +++|+...+..+....+|..+++.+.+.
T Consensus       126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~  154 (394)
T TIGR00883       126 PPGKRGFYGSFQQVGAPVGLLLAALTVLL  154 (394)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence             5679999999998888888888776543

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>TIGR00896 CynX cyanate transporter

Probab=98.37  E-value=2.7e-06  Score=85.41  Aligned_cols=127  Identities=15%  Similarity=0.064  Sum_probs=93.0

Q ss_pred             hHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q psy13668        183 DLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGM  262 (513)
Q Consensus       183 ~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  262 (513)
                      .+|.+ ++.+|+|..+.++..+...++..++.+..|+++||++||+....+.+...++.... ..++.....+..+..++
T Consensus        22 ~lp~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~   99 (355)
T TIGR00896        22 LLPQI-RSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGV   99 (355)
T ss_pred             cHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHH
Confidence            45555 45679999999999999999999999999999999999999888877766665554 33332222222222233


Q ss_pred             HHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        263 GTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      +. +...+.......+..|++|+.+.++.+...+++..+++.+.+.+.+.
T Consensus       100 g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~  148 (355)
T TIGR00896       100 GI-AIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQH  148 (355)
T ss_pred             HH-HHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            22 22233344455677788899999999999999999999988877653

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=98.36  E-value=9.3e-06  Score=84.31  Aligned_cols=108  Identities=10%  Similarity=-0.080  Sum_probs=76.1

Q ss_pred             hHHhchhHHHHHHHHHhhhhhcCCCcccchhhH-hhHHHHHHHHHHHhc-CChhHHHHHHHHHHHHHHhhhhhhHHHhhc
Q psy13668        200 DLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS-ASVGPGLGILAASYS-GCNRLAVTVSFTLGMGTMGAFLPSLKVNAL  277 (513)
Q Consensus       200 ~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (513)
                      +...++..+...+..++.|-++|+.++||.... ..+...++...+.+. +.++.....++.++..+.......+.+...
T Consensus        73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP  152 (477)
T PF11700_consen   73 LYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLP  152 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            345667777888889999999999887765544 444555555555554 444455566666666666666677777777


Q ss_pred             ccCc-chh--------------------------HHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        278 DLSP-NYA--------------------------GTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       278 ~~~p-~~~--------------------------g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      ++.+ +.+                          +..++.....+++|+.+.-.+.-
T Consensus       153 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l  209 (477)
T PF11700_consen  153 DLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISL  209 (477)
T ss_pred             hhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHH
Confidence            8874 345                          89999999999999987766543

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>TIGR00805 oat sodium-independent organic anion transporter

Probab=98.32  E-value=3.9e-06  Score=90.58  Aligned_cols=71  Identities=14%  Similarity=0.021  Sum_probs=57.7

Q ss_pred             HHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHh
Q psy13668        176 GLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASY  246 (513)
Q Consensus       176 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~  246 (513)
                      ...++..-.-.-++++++++..+.|++.+...++..++.+..+++.||.+||+++.++.++.+++.++...
T Consensus        47 ~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~al  117 (633)
T TIGR00805        47 LYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSL  117 (633)
T ss_pred             HHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhC
Confidence            33344444444567779999999999999999999999999999999999999999988887777665543

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=98.31  E-value=1.2e-07  Score=99.66  Aligned_cols=267  Identities=14%  Similarity=0.122  Sum_probs=0.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccCCchHHH
Q psy13668         21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVF  100 (513)
Q Consensus        21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f  100 (513)
                      +.|+..+...+|+++|..+++.+...+-+|...                     .+-+..+.|---.|+    ..|---|
T Consensus       178 YiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~---------------------~~~~~~i~p~dp~Wv----GAWWLGf  232 (539)
T PF03137_consen  178 YIGILYAMSILGPALGFLLGSFCLRIYVDFPKV---------------------PPDGVGITPSDPRWV----GAWWLGF  232 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             chhhhhHHhhccHHHHHHHHHHHHhceeCCccc---------------------cccCCCCCCCCccHH----HHHHHHH
Confidence            388999999999999999998877654222110                     000001111111111    1355556


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCCCccchh--ccc-ccccccchhhhhc---------cCCCCCCchhhhccchhHHHHHH
Q psy13668        101 YVFGAVGLAWFALWMTFASSDPSESTHYV--AYG-TAVMHKSNRFIFS---------FQNLPPTPWGKIATSAPVIGLII  168 (513)
Q Consensus       101 ~i~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~~l  168 (513)
                      .+.+.+.++..+..+++-++.|+.++..+  +.. ...++.+++...+         ..+.-....+++++||.+....+
T Consensus       233 li~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~l  312 (539)
T PF03137_consen  233 LICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLIL  312 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHH
Confidence            66777777777666666555555411100  000 0000000000000         01112345678899999999999


Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH-HHHHHHHhhhhhcCCCcc--cchhhHhhHHHHHHHHH--
Q psy13668        169 AQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR-SVIVTYKMRTILSGPRLT--SPFDFSASVGPGLGILA--  243 (513)
Q Consensus       169 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~--~~~~~~~~~~~~~~~~~--  243 (513)
                      ..........++.+++|.|++.+++.++.++.++.....+ +..+|.+++|++.+|++-  |+......+...+..+.  
T Consensus       313 a~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~  392 (539)
T PF03137_consen  313 AGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYS  392 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999988766655 678999999999999753  33333222222222111  


Q ss_pred             -HH---------------hc-------------C------------------C--hhH--HHHHHHHH-HHHHHhhhhhh
Q psy13668        244 -AS---------------YS-------------G------------------C--NRL--AVTVSFTL-GMGTMGAFLPS  271 (513)
Q Consensus       244 -l~---------------~~-------------~------------------~--~~~--~~~~~~~~-~~~~~~~~~~~  271 (513)
                       +.               +.             .                  .  ...  ..+.++.+ .+.......|.
T Consensus       393 ~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~  472 (539)
T PF03137_consen  393 PLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPS  472 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccch
Confidence             10               10             0                  0  000  11111111 22223445556


Q ss_pred             HHHhhcccCcchhHHHHHHHHHHH-hHHhhHHHHHHHHhccc
Q psy13668        272 LKVNALDLSPNYAGTLMALVGGIG-ALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       272 ~~~~~~~~~p~~~g~~~gi~~~~~-~i~~~igp~l~g~l~~~  312 (513)
                      ......-+.+++|..+.|+..++. -+|.+-+|.+.|.++|.
T Consensus       473 ~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~  514 (539)
T PF03137_consen  473 TLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS  514 (539)
T ss_dssp             ------------------------------------------
T ss_pred             heeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence            667777777899999999988755 56668899999999985

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=98.29  E-value=5e-06  Score=83.90  Aligned_cols=94  Identities=15%  Similarity=0.037  Sum_probs=79.5

Q ss_pred             hhhccc-hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC----cchhhhhHHhchhHHHHHHHHHhhhhhcCC-Ccccc
Q psy13668        155 GKIATS-APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH----FSITSVDLISGWPNRSVIVTYKMRTILSGP-RLTSP  228 (513)
Q Consensus       155 ~~~l~~-~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g----~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~  228 (513)
                      +..+++ +.++.++..-+.--+++|++..-+-.|+....+    +|.+++.-+...+....-...+++||++|| .|+|+
T Consensus        14 ~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~   93 (498)
T COG3104          14 MKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR   93 (498)
T ss_pred             cccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Confidence            345665 457788888888899999999999999988888    999999888888888888888999999999 69999


Q ss_pred             hhhHhhHHHHHHHHHHHhcC
Q psy13668        229 FDFSASVGPGLGILAASYSG  248 (513)
Q Consensus       229 ~~~~~~~~~~~~~~~l~~~~  248 (513)
                      .++.+.++..++.+++....
T Consensus        94 tI~lGail~~iGh~~L~~~~  113 (498)
T COG3104          94 TIVLGAILMAIGHLVLAISS  113 (498)
T ss_pred             HHHHHHHHHHHHHHHHhccc
Confidence            99999999888888877653

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=98.26  E-value=0.00072  Score=70.36  Aligned_cols=58  Identities=14%  Similarity=0.292  Sum_probs=46.4

Q ss_pred             hhhhhhhhh----hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH
Q psy13668          8 NVMLHRLVN----EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL   67 (513)
Q Consensus         8 ~~~~~~~~~----~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~   67 (513)
                      +++++|++|    +|.+..++.+.+..+|..++|.++|++.+.. |||+.|.+.+. +...+.+
T Consensus       122 ~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~-Gw~~~F~iaai-gm~l~li  183 (493)
T PRK15462        122 SCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY-SWAMGFGLAAV-GMIAGLV  183 (493)
T ss_pred             HHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh-ChHHHHHHHHH-HHHHHHH
Confidence            567889985    3666789999999999999999999999999 99999987543 3333433

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=98.23  E-value=7.1e-06  Score=69.59  Aligned_cols=110  Identities=16%  Similarity=0.060  Sum_probs=79.9

Q ss_pred             HhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc
Q psy13668        202 ISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP  281 (513)
Q Consensus       202 ~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  281 (513)
                      ......++..++.+..|++.||++||+....+.....++.+.....++........+..+ ...+...+.......|..|
T Consensus         3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~   81 (141)
T TIGR00880         3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQG-FGAAFALVAGAALIADIYP   81 (141)
T ss_pred             EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH-HHHHHHHHhHHHHHHHHCC
Confidence            345667788999999999999999999988887777777666655443333222222222 2334445556666667765


Q ss_pred             -chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        282 -NYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       282 -~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                       ++|+++.++.+....++..++|.+.+.+.+.
T Consensus        82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  113 (141)
T TIGR00880        82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQF  113 (141)
T ss_pred             hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc
Confidence             6699999999999999999999999888753

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=98.23  E-value=5e-05  Score=78.58  Aligned_cols=145  Identities=12%  Similarity=0.002  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcC----CCcccchhhHh-hHHHH
Q psy13668        164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSG----PRLTSPFDFSA-SVGPG  238 (513)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d----r~~~~~~~~~~-~~~~~  238 (513)
                      ...+...+.....+-....+++.|++ .+|.+....+.+.....+...+..++.|+++|    |+|||+..... .+...
T Consensus         7 i~~~~~~~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~   85 (477)
T TIGR01301         7 LRVASVAAGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA   85 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHH
Confidence            34444444555555555667778775 47999999999999999999999999999999    59999887664 55555


Q ss_pred             HHHHHHHhcCCh------------hH----HHHHHHHHHHHHHhhhhhhHHHhhcccCcch---hHHHHHHHHHHHhHHh
Q psy13668        239 LGILAASYSGCN------------RL----AVTVSFTLGMGTMGAFLPSLKVNALDLSPNY---AGTLMALVGGIGALSG  299 (513)
Q Consensus       239 ~~~~~l~~~~~~------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~g~~~gi~~~~~~i~~  299 (513)
                      +++.++.+..+.            ..    ..+..+.+.-.......+...+...|..|++   ++.+.++.+...++|+
T Consensus        86 ~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~  165 (477)
T TIGR01301        86 FAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGN  165 (477)
T ss_pred             HHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHH
Confidence            565665543321            11    1122222223344455566777888888643   3789999999999999


Q ss_pred             hHHHHHHHHh
Q psy13668        300 TVSPYLVGVL  309 (513)
Q Consensus       300 ~igp~l~g~l  309 (513)
                      .+++.+.+..
T Consensus       166 ilg~~~g~~~  175 (477)
T TIGR01301       166 VLGYAAGAYS  175 (477)
T ss_pred             HHHHHHHHHH
Confidence            9999988764

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=98.20  E-value=1.2e-05  Score=84.48  Aligned_cols=93  Identities=14%  Similarity=-0.035  Sum_probs=62.4

Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHHH----hhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchh
Q psy13668        155 GKIATSAPVIGLIIAQIGHDFGLFTIV----TDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFD  230 (513)
Q Consensus       155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~----~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~  230 (513)
                      ...+++++++..+....+.....|...    .-++...+ ..|-+ .+..++.....++..+..++.|+++|.+|||.+.
T Consensus        34 ~g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~-diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~  111 (599)
T PF06609_consen   34 DGYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINA-DIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFF  111 (599)
T ss_pred             CCceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH-hcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Confidence            456677887766655444433333322    23443333 34654 4555666778889999999999999999999999


Q ss_pred             hHhhHHHHHHHHHHHhcCC
Q psy13668        231 FSASVGPGLGILAASYSGC  249 (513)
Q Consensus       231 ~~~~~~~~~~~~~l~~~~~  249 (513)
                      +.+.++..++.++.....+
T Consensus       112 i~g~~l~vvG~Iv~atA~~  130 (599)
T PF06609_consen  112 IIGSLLGVVGSIVCATAQN  130 (599)
T ss_pred             HHHHHHHHhHHHHhhcCCc
Confidence            9888877777766655443

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>KOG2816|consensus

Probab=98.19  E-value=7.8e-05  Score=76.76  Aligned_cols=276  Identities=18%  Similarity=0.219  Sum_probs=167.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCchHHHHH------HHHHHHHHHHHHHHHHhhh--------------------------
Q psy13668         28 GAQIGNVVSMAVSGLLIRYLGGWTSVFYV------FGAVGLAWFALWMTFATGA--------------------------   75 (513)
Q Consensus        28 ~~~lG~~i~~~i~g~L~~~~~gwr~if~~------~g~~~~~~~~~~~~~~~~~--------------------------   75 (513)
                      ...+.+.+..+.-|.++|++ ||+..+..      ...+...+...|.+...+.                          
T Consensus        70 ~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~~~~~~~~~~l~g~~~~~~s~~~a~vadis~~~~R~~  148 (463)
T KOG2816|consen   70 TAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQGYWFFLLLGLSGGFSAIFSVGFAYVADISSEEERSS  148 (463)
T ss_pred             hhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHHHHHHhhhcccccchhhhhhhhhhheeeccchhHHHH
Confidence            45677888888999999999 88777653      1112222222111111110                          


Q ss_pred             ---------hhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccch-hcccccccccchhhhhc
Q psy13668         76 ---------QIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHY-VAYGTAVMHKSNRFIFS  145 (513)
Q Consensus        76 ---------~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~  145 (513)
                               ..+..++|.+++.+.+.. |--..|.+..+..+...+...+++||...+.... .      ...+......
T Consensus       149 ~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~------~~~~~~~~~~  221 (463)
T KOG2816|consen  149 SIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLFLPESLQEKERSDA------TLRELTPGSL  221 (463)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhccccccCccccccc------cccccCCCcc
Confidence                     134567777788877776 8888888877777777766777777753332111 0      0000000000


Q ss_pred             cCCCCCCch---hhhccchhHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhh-hh
Q psy13668        146 FQNLPPTPW---GKIATSAPVIGLIIAQIGHDFGLFTIVT-DLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRT-IL  220 (513)
Q Consensus       146 ~~~~~~~~~---~~~l~~~~~~~~~l~~~~~~~~~~~~~~-~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g-~l  220 (513)
                      ........+   ...-.+|..+.+++..+........-.. .++.|+...++++..+.+.+.+.......+++.+.. .+
T Consensus       222 ~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l  301 (463)
T KOG2816|consen  222 DSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLL  301 (463)
T ss_pred             cchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            000000011   1111235556656555554444433222 446677788899999999888888888888888877 77


Q ss_pred             cCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhccc-CcchhHHHHHHHHHHHhHHh
Q psy13668        221 SGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDL-SPNYAGTLMALVGGIGALSG  299 (513)
Q Consensus       221 ~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~g~~~gi~~~~~~i~~  299 (513)
                      ....+.|+....+++...+......+....+........  ..+.....+..-+..... .++++|.+.++...+..+.+
T Consensus       302 ~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~--~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~  379 (463)
T KOG2816|consen  302 SSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVV--VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSG  379 (463)
T ss_pred             HHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHH--HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhh
Confidence            777888888888888777777777766554432222211  233344445544444444 47889999999999999999


Q ss_pred             hHHHHHHHHhccch
Q psy13668        300 TVSPYLVGVLTPNW  313 (513)
Q Consensus       300 ~igp~l~g~l~~~~  313 (513)
                      .++|.+.+.+...+
T Consensus       380 ~~~~~~~~~i~~~t  393 (463)
T KOG2816|consen  380 VVSPALYGNIFALT  393 (463)
T ss_pred             hhhHHHHHHHHHHH
Confidence            99999988776533

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.18  E-value=8.3e-05  Score=75.68  Aligned_cols=144  Identities=12%  Similarity=0.038  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC----cc-cchhhHhhHHHHHH
Q psy13668        166 LIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR----LT-SPFDFSASVGPGLG  240 (513)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~----~~-~~~~~~~~~~~~~~  240 (513)
                      ....-+..+..+.....|+..|+.|..|+|+..+|.+..+.=+.-++.-++.|.++||.    || |+.+..+.+..++.
T Consensus        17 Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~   96 (467)
T COG2211          17 YGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIV   96 (467)
T ss_pred             hcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHH
Confidence            33444455566666778999999999999999999999999999999999999999984    44 45666776777776


Q ss_pred             HHHHHhcCC-----hhHHHHHHHHHHHHHHhhhhhhHHHhhcccC--cchhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        241 ILAASYSGC-----NRLAVTVSFTLGMGTMGAFLPSLKVNALDLS--PNYAGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       241 ~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      ..++...++     ....+.+...+...+......++.+...++.  |++|....+.=....+++..+...+...+
T Consensus        97 ~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~pl  172 (467)
T COG2211          97 AVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPL  172 (467)
T ss_pred             HHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            666666553     1222333333333344455555666666665  67788888877777777765555444433

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=98.14  E-value=6.5e-05  Score=79.30  Aligned_cols=116  Identities=9%  Similarity=-0.016  Sum_probs=85.4

Q ss_pred             cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCCh-----hHHHHHHHHHHHHHHhhh
Q psy13668        194 FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCN-----RLAVTVSFTLGMGTMGAF  268 (513)
Q Consensus       194 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~  268 (513)
                      .+..+.+++.+...++..++.++.|+++||+|||+....+.++..++.++.......     ....+..-.+.....+..
T Consensus        53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~  132 (502)
T TIGR00887        53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGD  132 (502)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhh
Confidence            455667889999999999999999999999999999988888777777666554331     122222222222334455


Q ss_pred             hhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        269 LPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       269 ~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      .+.......|..| ++||.+.++.+....+|..+++.+...+
T Consensus       133 ~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~  174 (502)
T TIGR00887       133 YPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIV  174 (502)
T ss_pred             hHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5666677777775 6799999999999999998888876544

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>KOG2615|consensus

Probab=98.04  E-value=9.2e-06  Score=78.89  Aligned_cols=133  Identities=18%  Similarity=0.134  Sum_probs=96.4

Q ss_pred             HHHHHhhHHHHHHHhcCc----chhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhH
Q psy13668        177 LFTIVTDLPKYMKDVLHF----SITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRL  252 (513)
Q Consensus       177 ~~~~~~~lp~~l~~~~g~----s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  252 (513)
                      .|.+.++.--.++...+.    +..-+|++-+.+.+.+.+.++.+|.++||+|||+++.++.++.++.+.+......-  
T Consensus        44 L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F--  121 (451)
T KOG2615|consen   44 LYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF--  121 (451)
T ss_pred             hhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH--
Confidence            344444444555544443    44567889999999999999999999999999999999988888866555443222  


Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        253 AVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .++.+-=+..+..-.......+...|+. +++|+.+++..++...+|-++||.+.|++..
T Consensus       122 ~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~  181 (451)
T KOG2615|consen  122 AAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ  181 (451)
T ss_pred             HHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence            1111111123333445556677888888 4679999999999999999999999999876

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=98.01  E-value=0.00016  Score=71.66  Aligned_cols=264  Identities=17%  Similarity=0.082  Sum_probs=150.7

Q ss_pred             HhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCc-----ccch-hhHhhHHHHHHHHHHHh----cCC-------hhH
Q psy13668        190 DVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRL-----TSPF-DFSASVGPGLGILAASY----SGC-------NRL  252 (513)
Q Consensus       190 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~-----~~~~-~~~~~~~~~~~~~~l~~----~~~-------~~~  252 (513)
                      .+++++..-.+.+.....+... .++..|+.||+.+     ||.. +..+.+....+..+..+    ...       +.+
T Consensus         8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~   86 (403)
T PF03209_consen    8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW   86 (403)
T ss_pred             HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence            4467777777777766666665 4899999999988     6644 44444444443333221    122       222


Q ss_pred             H--HHHHHHHHHHH--HhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccchhhhHHHhh------
Q psy13668        253 A--VTVSFTLGMGT--MGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNS------  321 (513)
Q Consensus       253 ~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~~~~l~~~------  321 (513)
                      .  ....+.+....  .........+...|..| ++|+.+.++.....-+|-+++..+.|.+++.+..+++.+-      
T Consensus        87 ~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~  166 (403)
T PF03209_consen   87 LGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVAL  166 (403)
T ss_pred             HHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHH
Confidence            2  12222221222  23334456777778875 6799999999999999999999999999998766654433      


Q ss_pred             ----------h-hhh-------------------hhhccCCCCCCCccchh-----------------------------
Q psy13668        322 ----------V-TYK-------------------MRTILSGPTLTSPFDFS-----------------------------  342 (513)
Q Consensus       322 ----------~-~~~-------------------~~~~~~~~~~~~~~~~~-----------------------------  342 (513)
                                + .|+                   .++...+||-.-.+.++                             
T Consensus       167 i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eT  246 (403)
T PF03209_consen  167 IALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGET  246 (403)
T ss_pred             HHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHH
Confidence                      0 000                   00000001100000000                             


Q ss_pred             ----------------------------------hcccchhhhhh---hhccCCchhHHHHHHHhhhccccccccccccc
Q psy13668        343 ----------------------------------ASVGPGLGILA---ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVN  385 (513)
Q Consensus       343 ----------------------------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (513)
                                                        +.....+++.+   .+..+.........+.+|.+..-+.......+
T Consensus       247 T~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~m  326 (403)
T PF03209_consen  247 TRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLM  326 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence                                              11222222222   22222222233333333333333444444555


Q ss_pred             ccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHH
Q psy13668        386 ALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYC  462 (513)
Q Consensus       386 ~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~  462 (513)
                      +.-..+++.|..+|.....+.++..++..++|.+.|-..       +++.. ....+|..+|..-++++++++++..
T Consensus       327 M~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~-------~~~~~-~~~~aY~~VF~lEa~ll~~a~~ll~  395 (403)
T PF03209_consen  327 MDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVR-------ALFGN-SPALAYGVVFALEAVLLLAALVLLG  395 (403)
T ss_pred             HhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhccC-CcchHHHHHHHHHHHHHHHHHHHHH
Confidence            555668889999999999999999999999998876311       01110 1345899999999998888877643

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=97.87  E-value=2.6e-06  Score=88.50  Aligned_cols=40  Identities=13%  Similarity=-0.073  Sum_probs=33.2

Q ss_pred             hhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHH
Q psy13668        198 SVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGP  237 (513)
Q Consensus       198 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~  237 (513)
                      +.++..+...++..+|+++.|+++||+|||+....+.+..
T Consensus        47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~   86 (451)
T PF00083_consen   47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM   86 (451)
T ss_pred             HHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence            4567788888999999999999999999998877644443

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=97.84  E-value=0.015  Score=59.42  Aligned_cols=150  Identities=7%  Similarity=0.020  Sum_probs=95.0

Q ss_pred             CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhh
Q psy13668        152 TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDF  231 (513)
Q Consensus       152 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~  231 (513)
                      .+|+..++++.+.......+++ ....++-..+..|+... |+|....+.+-....+.++.|.....++.+|+|..+.-.
T Consensus       250 ~~w~~Y~~q~vflas~alalLY-~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~  327 (432)
T PF06963_consen  250 RGWRTYFRQPVFLASFALALLY-FTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGL  327 (432)
T ss_pred             ccHHHHHhCHHHHHHHHHHHHH-HHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHH
Confidence            3456667766655544444443 33445566778888876 999999999999999999999999999999999887776


Q ss_pred             HhhHHHHHHHHHH---HhcCC-h-hHHHHHHHH--HHHHHHhhh--hhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhH
Q psy13668        232 SASVGPGLGILAA---SYSGC-N-RLAVTVSFT--LGMGTMGAF--LPSLKVNALDLS-PNYAGTLMALVGGIGALSGTV  301 (513)
Q Consensus       232 ~~~~~~~~~~~~l---~~~~~-~-~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~i  301 (513)
                      .+...-..++.+.   .+.+. + .......+.  +...=.|..  .-......+|.. +++||...|+.+...++...+
T Consensus       328 ~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll  407 (432)
T PF06963_consen  328 WSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELL  407 (432)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence            6665443333222   22222 2 122222222  222222322  223444555544 567999999999998877655


Q ss_pred             HH
Q psy13668        302 SP  303 (513)
Q Consensus       302 gp  303 (513)
                      .-
T Consensus       408 ~~  409 (432)
T PF06963_consen  408 SF  409 (432)
T ss_pred             HH
Confidence            43

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>KOG0255|consensus

Probab=97.83  E-value=9.5e-05  Score=78.41  Aligned_cols=122  Identities=17%  Similarity=0.100  Sum_probs=97.5

Q ss_pred             HhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhh
Q psy13668        190 DVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFL  269 (513)
Q Consensus       190 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  269 (513)
                      +..+.+.....+..+...++..+|.++.|.++||+|||+++..++++..++.+...+.++-....+.-+..+++..+...
T Consensus       111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~  190 (521)
T KOG0255|consen  111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT  190 (521)
T ss_pred             ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence            44566777888889999999999999999999999999999999999999987777777666656555665555444444


Q ss_pred             hhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668        270 PSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       270 ~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                       .......|+. |++|+.+..+ ......++.++|...+++.+++
T Consensus       191 -~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~W  233 (521)
T KOG0255|consen  191 -VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDW  233 (521)
T ss_pred             -HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhH
Confidence             4444445555 7889999999 8899999999999999988854

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=97.79  E-value=0.00016  Score=67.91  Aligned_cols=141  Identities=13%  Similarity=0.024  Sum_probs=100.4

Q ss_pred             HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC--
Q psy13668        172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGC--  249 (513)
Q Consensus       172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~--  249 (513)
                      ......|.+..|-|.. ++++|+|.+|...+.....++..+| +..|.+.||.+.+....++.+...++...+.....  
T Consensus        13 ~~~Gt~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~   90 (250)
T PF06813_consen   13 LCSGTTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR   90 (250)
T ss_pred             HhcCcccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            3344567777777654 6789999999999999999998875 88899999999999999999988888877765322  


Q ss_pred             ---hhHHHH-HHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccchh
Q psy13668        250 ---NRLAVT-VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWL  314 (513)
Q Consensus       250 ---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~  314 (513)
                         ...+.+ ....++................+.+|++||++.|+.-....+++++-..+...+.++..
T Consensus        91 i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~  159 (250)
T PF06813_consen   91 IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDP  159 (250)
T ss_pred             cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCCh
Confidence               122222 22222222222222333344445668999999999999999999988888777776533

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=97.77  E-value=8.6e-05  Score=73.55  Aligned_cols=122  Identities=9%  Similarity=-0.084  Sum_probs=79.4

Q ss_pred             hhHHHHHHHhcCc---chh----hhhHHhchhHHHHHHHHHhhhhhcCCCcccchh-hHhhHHHHHHHHHHHhcCC-hh-
Q psy13668        182 TDLPKYMKDVLHF---SIT----SVDLISGWPNRSVIVTYKMRTILSGPRLTSPFD-FSASVGPGLGILAASYSGC-NR-  251 (513)
Q Consensus       182 ~~lp~~l~~~~g~---s~~----~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~~l~~~~~-~~-  251 (513)
                      +..|.|+++..+-   ++.    ..+...++..+...+-.++-|.++|+.|+||.. .....+..+++..+.+.++ +. 
T Consensus        36 ~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~  115 (438)
T COG2270          36 FIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYL  115 (438)
T ss_pred             ehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchH
Confidence            3467888777554   333    334556666777778889999999998866554 4445556666677777666 33 


Q ss_pred             HHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHH
Q psy13668        252 LAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSP  303 (513)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp  303 (513)
                      +..+.++.+...........+.+...++.+ ++.++.++.....+++|+.+.-
T Consensus       116 ~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~l  168 (438)
T COG2270         116 LLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILL  168 (438)
T ss_pred             HHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHH
Confidence            344444555555556666667777777775 4577777777777777665543

>TIGR00901 2A0125 AmpG-related permease

Probab=97.77  E-value=0.00035  Score=70.08  Aligned_cols=130  Identities=13%  Similarity=-0.104  Sum_probs=87.0

Q ss_pred             HhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-----cccch-hhHhhHHHHHHHHHHHhcCChh-H-
Q psy13668        181 VTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-----LTSPF-DFSASVGPGLGILAASYSGCNR-L-  252 (513)
Q Consensus       181 ~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~~-~~~~~~~~~~~~~~l~~~~~~~-~-  252 (513)
                      ..-+|.+++| +|+|.++.++.... .+...+ .++.|.+.||+     ||||. +..+.+..+++...+.+..+.. . 
T Consensus         8 ~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~   84 (356)
T TIGR00901         8 GNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP   84 (356)
T ss_pred             HhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence            3356777776 59999999988644 333333 88999999997     78776 4555666666655555543322 1 


Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668        253 AVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      .......+...+.....+.......|.. +++|+.+.|+.....++|..+++.+.+.+.+..
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~  146 (356)
T TIGR00901        85 LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE  146 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            2222222222334444555666677776 577999999999999999999999998877543

>TIGR00788 fbt folate/biopterin transporter

Probab=97.77  E-value=0.0004  Score=72.48  Aligned_cols=148  Identities=9%  Similarity=-0.041  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCc-----ccchhhHhhHHH
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRL-----TSPFDFSASVGP  237 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~-----~~~~~~~~~~~~  237 (513)
                      .......++..+.. +.....++.++++.+|+|..+.+.+.+...+...+-.+ +|.++||++     ||+.+..+.+..
T Consensus        28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~  105 (468)
T TIGR00788        28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLG  105 (468)
T ss_pred             HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHH
Confidence            34445556677776 77777889999999999999999998888888888555 999999985     455555555444


Q ss_pred             -HHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhH---HHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        238 -GLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAG---TLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       238 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g---~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                       .+++..+...++.......++.+............-....|..++++.   ...+......++|..+++.+.|.+.+.
T Consensus       106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~  184 (468)
T TIGR00788       106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK  184 (468)
T ss_pred             HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh
Confidence             233333332222222222222232333333334444444454443332   233444445568999999999988764

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PF12832 MFS_1_like: MFS_1 like family

Probab=97.67  E-value=0.00013  Score=55.26  Aligned_cols=66  Identities=14%  Similarity=0.011  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668        167 IIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA  233 (513)
Q Consensus       167 ~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~  233 (513)
                      -..+++...+...+..++|.|+++ .|+|+.+.|++.....+...++.+++|.++||.++++.....
T Consensus         6 k~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~   71 (77)
T PF12832_consen    6 KAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLG   71 (77)
T ss_pred             HHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence            345566667777888899999997 699999999999999999999999999999999998876553

>KOG2504|consensus

Probab=97.65  E-value=0.00011  Score=77.03  Aligned_cols=150  Identities=11%  Similarity=0.068  Sum_probs=114.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHH---HHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLP---KYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL  239 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp---~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~  239 (513)
                      -|...+..|..+...+++..-..   ..+++.++.+..+.+++.++......+..++.+.+.||+|.|.+.+.+.++..+
T Consensus        44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~  123 (509)
T KOG2504|consen   44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL  123 (509)
T ss_pred             eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence            35666666666666665544322   334566788888899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCChhHHHHHHHHHHHH-HHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668        240 GILAASYSGCNRLAVTVSFTLGMG-TMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       240 ~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      ++++..+..+-+. ..+.+.+..+ ..++.+....+....+++++|+.++|+......+|..+-|.+...+++.+
T Consensus       124 g~~lssF~~~i~~-l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~  197 (509)
T KOG2504|consen  124 GLLLSSFATSLWQ-LYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY  197 (509)
T ss_pred             HHHHHHHHhhHHH-HHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh
Confidence            9998888876433 2333332222 24455555566666888999999999999999999999999999888753

>PRK11462 putative transporter; Provisional

Probab=97.64  E-value=0.00093  Score=69.62  Aligned_cols=138  Identities=9%  Similarity=-0.029  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC----Cccc-chhhHhhHHHHHHHHHH
Q psy13668        170 QIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP----RLTS-PFDFSASVGPGLGILAA  244 (513)
Q Consensus       170 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~~-~~~~~~~~~~~~~~~~l  244 (513)
                      -+..+..+..+..|+..|+.|..|+++..++.+....-+...+.-++.|+++||    +||| +.+..+.+..+++..++
T Consensus        18 ~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ll   97 (460)
T PRK11462         18 DAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLA   97 (460)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHH
Confidence            333444555566789999999999999999999999999999999999999997    4554 55666666666666665


Q ss_pred             HhcCCh--hH---HHHHHHHHHHHHHhhhhhhHHHhhcccC--cchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        245 SYSGCN--RL---AVTVSFTLGMGTMGAFLPSLKVNALDLS--PNYAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       245 ~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      ...+..  ..   .......+...+......++.+...++.  +++|...++.-...+++|+.+++.+..
T Consensus        98 f~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~  167 (460)
T PRK11462         98 YSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMM  167 (460)
T ss_pred             HhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            544421  11   1111222222233444456667777776  567999999888888888777766543

>KOG0253|consensus

Probab=97.64  E-value=0.00073  Score=65.70  Aligned_cols=67  Identities=7%  Similarity=-0.142  Sum_probs=52.5

Q ss_pred             HHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHH
Q psy13668        177 LFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILA  243 (513)
Q Consensus       177 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~  243 (513)
                      ...+...+..-+++..+.+..+..++......+..+++..+|.++|++|||+..........+.-.+
T Consensus        93 ~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~i  159 (528)
T KOG0253|consen   93 EMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVI  159 (528)
T ss_pred             HHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHh
Confidence            3344555556677778888899999999999999999999999999999998876665555444433

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=97.40  E-value=0.017  Score=56.57  Aligned_cols=68  Identities=15%  Similarity=0.096  Sum_probs=51.1

Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC
Q psy13668        154 WGKIATSAPVIGLIIAQIGHDFGLFTIVT-DLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR  224 (513)
Q Consensus       154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~-~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~  224 (513)
                      ++.+.+|++++.+.++..+.-..+|.+.. |.|..-.+.   ....-|++.+......++|+.+..++..|.
T Consensus       237 ~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~---~~~P~GlIFssFM~a~MlGS~lf~~l~s~~  305 (354)
T PF05631_consen  237 WRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDD---EELPLGLIFSSFMVAMMLGSSLFSRLLSKS  305 (354)
T ss_pred             HHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCC---CCCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            35677889999999999998899888766 777764211   223478888888899999998887655543

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=97.37  E-value=0.00011  Score=62.11  Aligned_cols=67  Identities=27%  Similarity=0.348  Sum_probs=51.3

Q ss_pred             ccccccccC-CCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHH
Q psy13668        380 PSLKVNALD-LSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITN  458 (513)
Q Consensus       380 ~~~~~~~~~-~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~  458 (513)
                      +.......| .++++++++.++.+....++..++|.+.+.+.+.   .               +|+..|.+.+.+.+++.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~---------------~~~~~~~~~~~~~~~~~  131 (141)
T TIGR00880        70 VAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF---L---------------GWRAPFLFLAILALAAF  131 (141)
T ss_pred             HhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc---c---------------chHHHHHHHHHHHHHHH
Confidence            334343444 5667899999999999999999999999988654   2               78889998888877776


Q ss_pred             HHHHhh
Q psy13668        459 IIYCFM  464 (513)
Q Consensus       459 ~~~~~~  464 (513)
                      +....+
T Consensus       132 ~~~~~~  137 (141)
T TIGR00880       132 ILLAFL  137 (141)
T ss_pred             HHHhhc
Confidence            665543

>KOG2533|consensus

Probab=97.27  E-value=0.00028  Score=73.27  Aligned_cols=76  Identities=14%  Similarity=0.125  Sum_probs=57.2

Q ss_pred             cccccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHH
Q psy13668        383 KVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYC  462 (513)
Q Consensus       383 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~  462 (513)
                      ..+...+.++++|..+|+.+...++|+++|..+...+.+..+.            ....|||+.|++.+++.++..++..
T Consensus       157 ~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~------------~~~~gW~~~FiI~G~i~~~~gi~~f  224 (495)
T KOG2533|consen  157 AILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS------------GGLAGWRWLFIIEGVITLVLGIVVF  224 (495)
T ss_pred             HHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC------------CCcCCceeehhHHHHHHHHHHheEE
Confidence            3344567899999999999999999999999998887552111            1123999999999999888777766


Q ss_pred             hhcccccc
Q psy13668        463 FMGSGEIQ  470 (513)
Q Consensus       463 ~~~~~~~~  470 (513)
                      ++.+..+.
T Consensus       225 ~~lp~~P~  232 (495)
T KOG2533|consen  225 FFLPDNPS  232 (495)
T ss_pred             EEecCChh
Confidence            65555543

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=97.25  E-value=0.0021  Score=66.33  Aligned_cols=230  Identities=14%  Similarity=0.046  Sum_probs=117.5

Q ss_pred             hHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhh
Q psy13668         77 IGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGK  156 (513)
Q Consensus        77 ~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (513)
                      +|.+++..++|.+.+.. +.|..|.+.+.+..+..+...++.+|+++. +..+.+..  .+++.+......+......++
T Consensus       135 ~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~  210 (433)
T PF03092_consen  135 VGSLVGSLLSGPLLDSF-GPQGVFLISAALPLLMLIVALFLLEERKVR-PADEVFSF--GKEEVPCLFGSFREQLSELWR  210 (433)
T ss_pred             HHHHHHHHhhhhhhhcC-CCeEEehHHHHHHHHHHHHHHHhhhhcccc-ccchhhcc--cccccchhhHHHHHHHHHHHH
Confidence            56777777888888887 899999887777666655555555542211 11100000  000000000000001123355


Q ss_pred             hccchhHHHHHH-HHHHHHHHHHHHHhhHHHHHHHhcC---cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH
Q psy13668        157 IATSAPVIGLII-AQIGHDFGLFTIVTDLPKYMKDVLH---FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS  232 (513)
Q Consensus       157 ~l~~~~~~~~~l-~~~~~~~~~~~~~~~lp~~l~~~~g---~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~  232 (513)
                      .++.+.+|...+ ..++.......-....-.+..+..+   +|+...+.+..+..++.++|..+..+...+..-|++...
T Consensus       211 ~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~  290 (433)
T PF03092_consen  211 ALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVV  290 (433)
T ss_pred             HHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence            666777776555 2222111111000000001123345   888888888878888888888887766555555665555


Q ss_pred             hhHHHHHHHHHHH-hcC--------ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHH
Q psy13668        233 ASVGPGLGILAAS-YSG--------CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVS  302 (513)
Q Consensus       233 ~~~~~~~~~~~l~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~ig  302 (513)
                      ..+..++..+.-. ...        ++.+..+.--.+.-......+-+......++.| ..-|+..|+...+.|+|..++
T Consensus       291 t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s  370 (433)
T PF03092_consen  291 TTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVS  370 (433)
T ss_pred             HHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHH
Confidence            4444443332211 110        011111111111122233333344455666665 459999999999999999888


Q ss_pred             HHHHHHhc
Q psy13668        303 PYLVGVLT  310 (513)
Q Consensus       303 p~l~g~l~  310 (513)
                      ..+...+.
T Consensus       371 ~~lg~~l~  378 (433)
T PF03092_consen  371 STLGAFLM  378 (433)
T ss_pred             HHHHHHHH
Confidence            77665444

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>KOG3762|consensus

Probab=97.23  E-value=0.00075  Score=68.79  Aligned_cols=86  Identities=14%  Similarity=-0.006  Sum_probs=52.2

Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhH
Q psy13668        156 KIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASV  235 (513)
Q Consensus       156 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~  235 (513)
                      .++.++.....++...+...+.-.+.+++=-+++|. +-.+.-.|........+-++.-+..+++.+|+|+-+++..++.
T Consensus       366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~-~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa  444 (618)
T KOG3762|consen  366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDL-GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLA  444 (618)
T ss_pred             HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhh
Confidence            345566665555555555555555566664455654 5555555655555556666777778888888888777666555


Q ss_pred             HHHHHHH
Q psy13668        236 GPGLGIL  242 (513)
Q Consensus       236 ~~~~~~~  242 (513)
                      +.++=++
T Consensus       445 ~~~~Rf~  451 (618)
T KOG3762|consen  445 CNVGRFL  451 (618)
T ss_pred             HHHHHHH
Confidence            4444333

>KOG0569|consensus

Probab=97.06  E-value=0.01  Score=61.26  Aligned_cols=119  Identities=11%  Similarity=-0.046  Sum_probs=78.8

Q ss_pred             HHHhcCcchhh------hhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC--ChhHHHHHHHH
Q psy13668        188 MKDVLHFSITS------VDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG--CNRLAVTVSFT  259 (513)
Q Consensus       188 l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~  259 (513)
                      +.+++|.+.++      -+...+...+++++|++..+.++||+|||..+....+...++.+++....  ......++.=.
T Consensus        45 ~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~  124 (485)
T KOG0569|consen   45 LIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRL  124 (485)
T ss_pred             HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            34556633322      24566778899999999999999999999877776666665555444332  22222222222


Q ss_pred             HHHHHHhhhhhhHHHhhcccCcch-hHHHHHHHHHHHhHHhhHHHHHH
Q psy13668        260 LGMGTMGAFLPSLKVNALDLSPNY-AGTLMALVGGIGALSGTVSPYLV  306 (513)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~gi~~~~~~i~~~igp~l~  306 (513)
                      +.....+...........|.+|++ ||....+......+|..++..+.
T Consensus       125 i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~  172 (485)
T KOG0569|consen  125 IVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLG  172 (485)
T ss_pred             HHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            222234555556677778999865 99999999988888888875443

>TIGR01272 gluP glucose/galactose transporter

Probab=97.00  E-value=0.02  Score=56.21  Aligned_cols=63  Identities=11%  Similarity=-0.015  Sum_probs=44.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC--cchhhhhHHhchhHHHHHHHHHhhhhhcCC
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH--FSITSVDLISGWPNRSVIVTYKMRTILSGP  223 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g--~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr  223 (513)
                      ..+....+..++...+.-...+-.-.|..+.-.  ......++......++..++..+.+.+..+
T Consensus         8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~   72 (310)
T TIGR01272         8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILS   72 (310)
T ss_pred             hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence            356667777777777777777777777765421  123456677788888999999999988855

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=96.90  E-value=0.024  Score=52.90  Aligned_cols=203  Identities=12%  Similarity=0.074  Sum_probs=96.8

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668         95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD  174 (513)
Q Consensus        95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~  174 (513)
                      .|++++.+.+++.++.+++..++=.+-  +..         .++|++...+....++....+++|++..|...+.+....
T Consensus        39 ~W~~I~si~~lL~~IpLIly~ifGk~f--d~~---------~~~~k~~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL  107 (267)
T PF07672_consen   39 NWQWILSIFILLIFIPLILYIIFGKNF--DIY---------SPKEKQEKENSTLSKKPSYKSILKEKETWKWILIYGIWL  107 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccc--ccc---------CcccccccccccccccchHHHHHccchHHHHHHHHHHHh
Confidence            699999988888777666665552221  111         111111101111223355688999998887666544321


Q ss_pred             HHHHHHHhhHHHHHHHhcCcchh-------------hhhHHhchhHHHHHHHHHhhhhhcCCC-cccchhhH----hhHH
Q psy13668        175 FGLFTIVTDLPKYMKDVLHFSIT-------------SVDLISGWPNRSVIVTYKMRTILSGPR-LTSPFDFS----ASVG  236 (513)
Q Consensus       175 ~~~~~~~~~lp~~l~~~~g~s~~-------------~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~----~~~~  236 (513)
                        ...+....+.+..+....|+.             ...........+..+|.+..|..+... .||+.+..    +.+.
T Consensus       108 --v~~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~  185 (267)
T PF07672_consen  108 --VVVVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVF  185 (267)
T ss_pred             --eeEEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHH
Confidence              111112223443322222221             112333334445556666677776654 45544332    1222


Q ss_pred             HHHHHHHHHhcCChhH---HHHHHHH-HHHHHHhhhhhhHHHhhccc---CcchhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        237 PGLGILAASYSGCNRL---AVTVSFT-LGMGTMGAFLPSLKVNALDL---SPNYAGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       237 ~~~~~~~l~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~p~~~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      .++..+.......+..   .....+. ++..+.-...+....+..|.   .|++.|...|+.-.++++.-.+.-.+.+.+
T Consensus       186 ~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i  265 (267)
T PF07672_consen  186 FVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVI  265 (267)
T ss_pred             HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            2222222212222221   1111111 22222223333444444443   488899999999988888776666555544


Q ss_pred             c
Q psy13668        310 T  310 (513)
Q Consensus       310 ~  310 (513)
                      .
T Consensus       266 ~  266 (267)
T PF07672_consen  266 A  266 (267)
T ss_pred             c
Confidence            3

>KOG0254|consensus

Probab=96.86  E-value=0.0094  Score=63.10  Aligned_cols=112  Identities=16%  Similarity=0.094  Sum_probs=86.9

Q ss_pred             hhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhc
Q psy13668        198 SVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNAL  277 (513)
Q Consensus       198 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (513)
                      +.+++.+...++..++.+..|+++|++|||+.+..+.+...++.++.....+.......-+..+++ .+...........
T Consensus        90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g-~G~~~~~~piy~s  168 (513)
T KOG0254|consen   90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLG-VGGASVLAPVYIS  168 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccc-hhhhhhcchhhHh
Confidence            347899999999999999999999999999999999999999888888877555545444544443 3333455677788


Q ss_pred             ccCcc-hhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        278 DLSPN-YAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       278 ~~~p~-~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      |+.|. .||...+..+....+|..++ .+.+...+
T Consensus       169 Eiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~  202 (513)
T KOG0254|consen  169 EIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTS  202 (513)
T ss_pred             hcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhc
Confidence            88875 69999999998888777777 55555553

>KOG2563|consensus

Probab=96.77  E-value=0.008  Score=60.31  Aligned_cols=129  Identities=16%  Similarity=0.006  Sum_probs=86.6

Q ss_pred             HHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCCh---hHHHHHHHHH
Q psy13668        184 LPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCN---RLAVTVSFTL  260 (513)
Q Consensus       184 lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~  260 (513)
                      +..+.++.+| +...+-++..++.+..+.-.+.+-|+.||+|-|.....+.....++..+-.....+   ...--.+...
T Consensus        67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~  145 (480)
T KOG2563|consen   67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHT  145 (480)
T ss_pred             HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHH
Confidence            4456777778 66667778888888999999999999999999999998888888877664433222   1111112222


Q ss_pred             HHHHHhhhhhhHHH-----hhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668        261 GMGTMGAFLPSLKV-----NALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       261 ~~~~~~~~~~~~~~-----~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      +-...+...+....     ...-+.|++|+++..+......+|.+++-.+-..+..+.
T Consensus       146 Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~  203 (480)
T KOG2563|consen  146 GQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS  203 (480)
T ss_pred             hHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence            22223333332222     222344789999999988888888888877777776655

>KOG2325|consensus

Probab=96.75  E-value=0.023  Score=58.37  Aligned_cols=83  Identities=10%  Similarity=-0.027  Sum_probs=57.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-cCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcc-cchhhHhhHHHHH
Q psy13668        162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDV-LHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLT-SPFDFSASVGPGL  239 (513)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~-~~~~~~~~~~~~~  239 (513)
                      ..++..+..++....+..+..-.-.|+++. .+-+.+..|+..+...++.++.++..|+-+.|.++ |+.++.+.+.+.+
T Consensus        35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~  114 (488)
T KOG2325|consen   35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAII  114 (488)
T ss_pred             hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHH
Confidence            345555555555544444444455666641 35667788999999999999999999999999874 5555666666666


Q ss_pred             HHHHH
Q psy13668        240 GILAA  244 (513)
Q Consensus       240 ~~~~l  244 (513)
                      +.++.
T Consensus       115 g~llY  119 (488)
T KOG2325|consen  115 GNLLY  119 (488)
T ss_pred             HHHHH
Confidence            55444

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=96.75  E-value=0.13  Score=52.71  Aligned_cols=49  Identities=22%  Similarity=0.455  Sum_probs=41.0

Q ss_pred             hhhhhhhh----hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHH
Q psy13668          9 VMLHRLVN----EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFG   58 (513)
Q Consensus         9 ~~~~~~~~----~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g   58 (513)
                      ++++|.++    +|.+..++.+.+-.+|+.++|++.+++.+++ ||+..|-..+
T Consensus       140 ~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-g~~~gF~~aa  192 (498)
T COG3104         140 SLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-GWHVGFGLAA  192 (498)
T ss_pred             HHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-CHHHHHHHHH
Confidence            56777773    4556688888888999999999999999999 9999997654

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=96.58  E-value=0.00054  Score=72.37  Aligned_cols=73  Identities=15%  Similarity=0.079  Sum_probs=0.0

Q ss_pred             HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc
Q psy13668        175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS  247 (513)
Q Consensus       175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~  247 (513)
                      ....++..-.-+-++.+++++..++|++.+..-++.++..+...+..+|..|-+++..+.++.+++.+++...
T Consensus        16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lP   88 (539)
T PF03137_consen   16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALP   88 (539)
T ss_dssp             -------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhcc
Confidence            3344444444455688899999999999999999999999999999999888888888888888887776655

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=96.54  E-value=0.034  Score=57.44  Aligned_cols=128  Identities=16%  Similarity=0.158  Sum_probs=78.4

Q ss_pred             HHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-----cccchhhHhhHHHHHHHHHHHhcCC---hhHHHHH
Q psy13668        185 PKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-----LTSPFDFSASVGPGLGILAASYSGC---NRLAVTV  256 (513)
Q Consensus       185 p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~  256 (513)
                      -.|+++.+|+++.+...+.....+... ..++.|.++|-+     .||+-+.++.++..++...+...+.   +......
T Consensus        13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~   91 (433)
T PF03092_consen   13 YPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV   91 (433)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence            357889999999988777666555444 367899999985     2444455566655555554444433   2223323


Q ss_pred             HHHHHHHHHhhhhhhHHHhhccc---CcchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668        257 SFTLGMGTMGAFLPSLKVNALDL---SPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW  313 (513)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~---~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~  313 (513)
                      ++.+............-....|.   .|+.+|..-+.......+|+.++..+.|.+.+..
T Consensus        92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~  151 (433)
T PF03092_consen   92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF  151 (433)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC
Confidence            32222222222222222233333   3555888888889999999999999988887753

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=96.51  E-value=1.1  Score=45.31  Aligned_cols=146  Identities=6%  Similarity=-0.106  Sum_probs=83.5

Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHh--cCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH
Q psy13668        155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDV--LHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS  232 (513)
Q Consensus       155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~  232 (513)
                      ++..+++.++.-.+=..+..++++-+.+|......+.  .+-+..-.|..-....+.+.++.+..|++..++.+..-...
T Consensus       241 ~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l  320 (412)
T PF01770_consen  241 KSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELAL  320 (412)
T ss_pred             HHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHH
Confidence            4455677776666666677777888888887777765  12233345667777778888899999999666655443333


Q ss_pred             hhH--HHHHHHHHHHhcCChhHHHHHHHH-HHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhH
Q psy13668        233 ASV--GPGLGILAASYSGCNRLAVTVSFT-LGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTV  301 (513)
Q Consensus       233 ~~~--~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~i  301 (513)
                      +.+  ..+.+++++.+..+ .+......+ ................+..+..+.-|.+.|+++++..+-..+
T Consensus       321 ~~~S~l~a~~L~lm~~t~~-Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQti  391 (412)
T PF01770_consen  321 GVFSLLQAGLLFLMSFTGN-IWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTI  391 (412)
T ss_pred             HHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence            333  33333333433332 222222222 222222222223344555556677888999888876554433

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=96.47  E-value=1.2  Score=45.07  Aligned_cols=41  Identities=15%  Similarity=0.051  Sum_probs=28.4

Q ss_pred             Hhhhhhh-HHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668        265 MGAFLPS-LKVNALDLSPNYAGTLMALVGGIGALSGTVSPYL  305 (513)
Q Consensus       265 ~~~~~~~-~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l  305 (513)
                      .|..+.+ +.....+..+++|..++|.....-.+|-.++..+
T Consensus       349 GGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll  390 (402)
T PF02487_consen  349 GGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLL  390 (402)
T ss_pred             hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            3444444 4455556678899999999988888777666544

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=96.39  E-value=0.014  Score=63.15  Aligned_cols=135  Identities=13%  Similarity=0.043  Sum_probs=97.9

Q ss_pred             HHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC-CcccchhhHhhHHHHHHHHHHHhcCCh----
Q psy13668        176 GLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP-RLTSPFDFSASVGPGLGILAASYSGCN----  250 (513)
Q Consensus       176 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~l~~~~~~----  250 (513)
                      ++|++...+..|+.+.+|++..++..+........-+..+++|+++|+ +|+++.+..+.++..++..++......    
T Consensus         2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~   81 (654)
T TIGR00926         2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGH   81 (654)
T ss_pred             ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccccc
Confidence            356677777888888899999998888888888888889999999998 688888888888877777766553211    


Q ss_pred             ---hHHHHHHHHHHHHHHhhhhhhHHHhhcccCc----chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        251 ---RLAVTVSFTLGMGTMGAFLPSLKVNALDLSP----NYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       251 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                         ....+..+.++.++.+..-+.......|..+    +.+-....+.+...++|+.+++.+.+.+-
T Consensus        82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~  148 (654)
T TIGR00926        82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILR  148 (654)
T ss_pred             chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               1122233334444455555666655555552    23777888899999999999999888775

>KOG2325|consensus

Probab=96.35  E-value=0.11  Score=53.56  Aligned_cols=59  Identities=17%  Similarity=0.296  Sum_probs=45.0

Q ss_pred             CCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHhh
Q psy13668        388 DLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFM  464 (513)
Q Consensus       388 ~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~  464 (513)
                      .+.|+.+++..|.+...++.+..++|.+...+....                  |.+++..+..++.++...+...+
T Consensus       416 iLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~------------------g~~~v~~~~~~~~l~~~~l~~~~  474 (488)
T KOG2325|consen  416 ILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS------------------GPRPVWIILLCLLLVVAALWIVF  474 (488)
T ss_pred             HhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc------------------CccHHHHHHHHHHHHHHHHHHHH
Confidence            467999999999999999999999998877775543                  66677777777666666554443

>KOG3626|consensus

Probab=96.24  E-value=0.029  Score=60.26  Aligned_cols=87  Identities=10%  Similarity=-0.023  Sum_probs=67.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG  240 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~  240 (513)
                      +.+..+.....+......++..-.-+-++++++++..+.|++...+-+++.+......+...|.-|-+++..+.+.++++
T Consensus        96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lg  175 (735)
T KOG3626|consen   96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLG  175 (735)
T ss_pred             chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHH
Confidence            44444443333333444455555566778899999999999999999999999999999999999999999999988888


Q ss_pred             HHHHHhc
Q psy13668        241 ILAASYS  247 (513)
Q Consensus       241 ~~~l~~~  247 (513)
                      .++..+.
T Consensus       176 sll~alP  182 (735)
T KOG3626|consen  176 SLLFALP  182 (735)
T ss_pred             HHHHhCh
Confidence            7777655

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=96.22  E-value=0.021  Score=43.70  Aligned_cols=77  Identities=13%  Similarity=0.043  Sum_probs=62.6

Q ss_pred             HHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh
Q psy13668        174 DFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR  251 (513)
Q Consensus       174 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~  251 (513)
                      ..+-+.+...+|...+| .++|..+.+.+.+.+.++-++|.+...++.++..+++....+.+...+.+..+...++..
T Consensus         5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~   81 (85)
T PF06779_consen    5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW   81 (85)
T ss_pred             hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence            34456666677776655 699999999999999999999999999999998888888888888888777777665543

Note that many members are hypothetical proteins.

>KOG0252|consensus

Probab=96.07  E-value=0.0033  Score=63.06  Aligned_cols=102  Identities=13%  Similarity=0.033  Sum_probs=70.0

Q ss_pred             cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC--Chh-HHHH----HHHHHHHHHHh
Q psy13668        194 FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG--CNR-LAVT----VSFTLGMGTMG  266 (513)
Q Consensus       194 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~--~~~-~~~~----~~~~~~~~~~~  266 (513)
                      ++....+.......++.++|++..|++.||+|||++....++++.++.+......  +.. ..+.    .-+.++.+ .+
T Consensus        81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiG-IG  159 (538)
T KOG0252|consen   81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIG-IG  159 (538)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcc-cc
Confidence            5566678888889999999999999999999999999998888888887544332  222 1111    12223322 34


Q ss_pred             hhhhhHHHhhcccCc-chhHHHHHHHHHHHh
Q psy13668        267 AFLPSLKVNALDLSP-NYAGTLMALVGGIGA  296 (513)
Q Consensus       267 ~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~  296 (513)
                      .=+|...+..+|.+. +.||.-.+..-..+.
T Consensus       160 GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg  190 (538)
T KOG0252|consen  160 GDYPLSATIMSESANKKTRGAFIAAVFAMQG  190 (538)
T ss_pred             CCCcchHHHhhhhhhhccccceeEEEEEecc
Confidence            556667777888885 458877665444333

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=96.01  E-value=0.37  Score=47.47  Aligned_cols=80  Identities=10%  Similarity=-0.037  Sum_probs=60.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG  240 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~  240 (513)
                      +++...........+..-.+..  ..|  +.+|++..+.+.+.......+.+-..+.|.++||+|||+..+...+...++
T Consensus        37 r~yl~vY~La~~aDWLQGpY~Y--~LY--~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~s  112 (354)
T PF05631_consen   37 RKYLLVYLLAMAADWLQGPYLY--ALY--ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLS  112 (354)
T ss_pred             HHHHHHHHHHHHHHHhhcchhH--HHH--HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence            5566555555555555433222  223  458999999999999999999999999999999999999988877777777


Q ss_pred             HHHH
Q psy13668        241 ILAA  244 (513)
Q Consensus       241 ~~~l  244 (513)
                      ++..
T Consensus       113 cl~k  116 (354)
T PF05631_consen  113 CLTK  116 (354)
T ss_pred             HHHH
Confidence            7543

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=96.00  E-value=0.28  Score=46.74  Aligned_cols=131  Identities=18%  Similarity=0.074  Sum_probs=81.6

Q ss_pred             HhhHHHHHHHhcCcch--hhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC-hhHHHHHH
Q psy13668        181 VTDLPKYMKDVLHFSI--TSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGC-NRLAVTVS  257 (513)
Q Consensus       181 ~~~lp~~l~~~~g~s~--~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~  257 (513)
                      ....+.+..+. +.+.  ...+.......+...++.+..|.+.||.|||+....+.....++.+....... ........
T Consensus        22 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (338)
T COG0477          22 SPALPLLLSTL-SLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLIL  100 (338)
T ss_pred             HHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHH
Confidence            33455555543 4343  46788888888888888899999999999986666665543444334444433 12222222


Q ss_pred             HHHHHHHHhhhhhhHHHhhcccCcc--hhHHHHHHHHH-HHhHHhhHHHHHHHHhccc
Q psy13668        258 FTLGMGTMGAFLPSLKVNALDLSPN--YAGTLMALVGG-IGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~p~--~~g~~~gi~~~-~~~i~~~igp~l~g~l~~~  312 (513)
                      ........+...+.......+..|+  +++...+.... ...++..++|.+.+.+...
T Consensus       101 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (338)
T COG0477         101 RLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA  158 (338)
T ss_pred             HHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2211122334555666677777774  78888888888 5777888888666665543

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=95.19  E-value=0.09  Score=53.78  Aligned_cols=71  Identities=10%  Similarity=-0.019  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA  233 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~  233 (513)
                      .+.+....++..+.--.+.+-.|.++.+.+.-+..-.+.+...-.+..++..+..|...||..|.+.....
T Consensus         4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~   74 (432)
T PF06963_consen    4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTS   74 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHH
Confidence            45667777777888888888899999988765666667777777788888888999999999998876653

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>KOG2816|consensus

Probab=94.61  E-value=0.2  Score=51.92  Aligned_cols=102  Identities=16%  Similarity=0.084  Sum_probs=74.6

Q ss_pred             HHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhH
Q psy13668        207 NRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAG  285 (513)
Q Consensus       207 ~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g  285 (513)
                      ++..++.++..|.++||+|||..+....+...+....+.+..   ++..+ +.-..+......+...+...|... ++|.
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~---~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~  147 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG---YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERS  147 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH---HHHhh-hcccccchhhhhhhhhhheeeccchhHHH
Confidence            677888999999999999999988877776666555554443   22222 222233344555566777777774 6799


Q ss_pred             HHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        286 TLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       286 ~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      ...|+.+.....+..++|.+.+.+.+.
T Consensus       148 ~~~gll~~~~~~~~~~~p~~~~~~~~~  174 (463)
T KOG2816|consen  148 SSIGLLSGTFGAGLVIGPALGGYLVKF  174 (463)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence            999999999999999999999988764

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=94.44  E-value=7.2  Score=40.57  Aligned_cols=84  Identities=7%  Similarity=0.006  Sum_probs=45.4

Q ss_pred             CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh---hhHHhchhHHHHHHHHHhhhhhcCCCcccc
Q psy13668        152 TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS---VDLISGWPNRSVIVTYKMRTILSGPRLTSP  228 (513)
Q Consensus       152 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~---~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~  228 (513)
                      .+++.++++|-...+++...+.+.....+..-.-..+++.+--+.+.   .+......++..++..++.+++.+|+|-+.
T Consensus       255 es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~  334 (472)
T TIGR00769       255 ESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLT  334 (472)
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence            35567788887776666655554444333332223334433211112   233444555566666666788888888765


Q ss_pred             hhhHhhH
Q psy13668        229 FDFSASV  235 (513)
Q Consensus       229 ~~~~~~~  235 (513)
                      ...+.-+
T Consensus       335 ~a~i~Pi  341 (472)
T TIGR00769       335 AALITPL  341 (472)
T ss_pred             HHHHHHH
Confidence            5544333

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PRK03612 spermidine synthase; Provisional

Probab=94.00  E-value=1.3  Score=46.85  Aligned_cols=143  Identities=15%  Similarity=-0.081  Sum_probs=78.9

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHH---HHHHHH
Q psy13668        168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPG---LGILAA  244 (513)
Q Consensus       168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~---~~~~~l  244 (513)
                      +..++...+...+.....-.+...+|-+....+.+.+.+..+..+|+.+++++.++..++.. ..-..+..   ++..++
T Consensus        21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll   99 (521)
T PRK03612         21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALIL   99 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHH
Confidence            33444455555555555566666788888999999999999999999998887643322221 11111111   111111


Q ss_pred             HhcC--Ch-hHHHH-HHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        245 SYSG--CN-RLAVT-VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       245 ~~~~--~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ....  .. ..... .+......+.|...|.......+...++.|...|-.+....+|+++|..+.+.++-
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl  170 (521)
T PRK03612        100 YAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLL  170 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence            1100  00 11111 11122223344555554444444333456777888888888888888888877654

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=93.47  E-value=1.7  Score=45.05  Aligned_cols=144  Identities=12%  Similarity=0.011  Sum_probs=87.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcc-----hhhhhHHhchhHHHHHHH-HHhhhhhcCCCcccchhhHhhH
Q psy13668        162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFS-----ITSVDLISGWPNRSVIVT-YKMRTILSGPRLTSPFDFSASV  235 (513)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s-----~~~~~~~~~~~~~~~~ig-~~~~g~l~dr~~~~~~~~~~~~  235 (513)
                      ++....+..|+....++.     ---++|....+     .+....+.+...+...+. .++.+++++|..|+++.-....
T Consensus         8 k~~~~~l~fF~il~~Y~i-----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~   82 (472)
T TIGR00769         8 KFLPLFLMFFCILFNYTI-----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS   82 (472)
T ss_pred             HHHHHHHHHHHHHHHHHH-----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence            444455555554444332     23457776663     245666666666666655 7889999999999987654333


Q ss_pred             HHHHHHHHHHhc---CCh---------------------------hHHHHHHHHHHHHHHhhhhh-hHHHhhcccC-cch
Q psy13668        236 GPGLGILAASYS---GCN---------------------------RLAVTVSFTLGMGTMGAFLP-SLKVNALDLS-PNY  283 (513)
Q Consensus       236 ~~~~~~~~l~~~---~~~---------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-p~~  283 (513)
                      .......++...   ...                           .|....+....-.......+ .++..+.|+. +++
T Consensus        83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q  162 (472)
T TIGR00769        83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE  162 (472)
T ss_pred             HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence            333222222111   100                           11222222233333344444 6788899998 577


Q ss_pred             hHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        284 AGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       284 ~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                      ..+-.++....+++|..+++.+...+.
T Consensus       163 akRfy~l~~~ganlg~i~sg~~~~~~~  189 (472)
T TIGR00769       163 AKRFYALFGLGANVALIFSGRTIKYFS  189 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999987765

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=93.15  E-value=0.59  Score=47.27  Aligned_cols=70  Identities=11%  Similarity=-0.058  Sum_probs=48.9

Q ss_pred             HHhhHHHHHHHh-cCcchhhhhHHhchhHH-HHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC
Q psy13668        180 IVTDLPKYMKDV-LHFSITSVDLISGWPNR-SVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGC  249 (513)
Q Consensus       180 ~~~~lp~~l~~~-~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~  249 (513)
                      ...++..|+.+. .|++..+..--.-+... ..++.-+....+.|..+.|++++...+...+...++.+..+
T Consensus        22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~s   93 (412)
T PF01770_consen   22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTS   93 (412)
T ss_pred             CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCc
Confidence            344677888876 88988887654444443 44555667888999999999988877776666665555543

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=92.74  E-value=3.3  Score=35.94  Aligned_cols=109  Identities=12%  Similarity=-0.016  Sum_probs=67.6

Q ss_pred             HHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC
Q psy13668        201 LISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS  280 (513)
Q Consensus       201 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (513)
                      .-..+......+.+++...+.++.|.|+.++++.++..+......+.. .+.........+++ .+..+........+..
T Consensus        41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~-~~~l~~~s~l~G~~-~a~lW~aqg~ylt~~s  118 (156)
T PF05978_consen   41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPN-SYTLYPASALLGFG-AALLWTAQGTYLTSYS  118 (156)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHhhh-hHHhhHhhhHHHHHcC
Confidence            345555666777888888899999999998888887776555544332 22222222222333 2333333333344444


Q ss_pred             -cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        281 -PNYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       281 -p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                       ++.+++-.++...+.+.+..+|..+.-.+.+
T Consensus       119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~  150 (156)
T PF05978_consen  119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ  150 (156)
T ss_pred             CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence             4568888999888888888888776655443

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>KOG0637|consensus

Probab=92.00  E-value=0.71  Score=46.85  Aligned_cols=143  Identities=16%  Similarity=0.130  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC----Cccc-chhhHhhHHH
Q psy13668        163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP----RLTS-PFDFSASVGP  237 (513)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~~-~~~~~~~~~~  237 (513)
                      ........+...+++-.=..++|+|+++ .|.+....+..-...-+.+++.+++.|..+||    +||| +.+..+.+..
T Consensus        34 li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i  112 (498)
T KOG0637|consen   34 LISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLI  112 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHH
Confidence            3444444444445544556689999987 59999988888888888899999999999998    5655 5566666777


Q ss_pred             HHHHHHHHhcC--------C----hhHHHHHHHHHHHHHHh----hhhhhHHHhhcccC-cchhHH-HHHHHHHHHhHHh
Q psy13668        238 GLGILAASYSG--------C----NRLAVTVSFTLGMGTMG----AFLPSLKVNALDLS-PNYAGT-LMALVGGIGALSG  299 (513)
Q Consensus       238 ~~~~~~l~~~~--------~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-p~~~g~-~~gi~~~~~~i~~  299 (513)
                      ++.++++.+..        +    .....+..+.+++...-    ......-+...|+. ++++-+ +.+...++..+|+
T Consensus       113 ~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGn  192 (498)
T KOG0637|consen  113 AVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGN  192 (498)
T ss_pred             HHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcc
Confidence            77776665432        1    12244555555554432    33445556667776 444444 8888777777777


Q ss_pred             hHHHHHH
Q psy13668        300 TVSPYLV  306 (513)
Q Consensus       300 ~igp~l~  306 (513)
                      .+|-.+.
T Consensus       193 vLGY~~g  199 (498)
T KOG0637|consen  193 VLGYALG  199 (498)
T ss_pred             eeeeecc
Confidence            6665444

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=89.25  E-value=1.2  Score=48.48  Aligned_cols=91  Identities=12%  Similarity=0.101  Sum_probs=59.6

Q ss_pred             HHHHhhhcccccccccccccccCCC-CC---ccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhcccccc
Q psy13668        366 VSFTLGMGTMGAFLPSLKVNALDLS-PN---YAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLL  441 (513)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~  441 (513)
                      ..+.+.....|.+-+...+...|.. ++   .+-+...+.....++|+++++.+.+.+.+....           ++...
T Consensus        90 ~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~-----------fg~~~  158 (654)
T TIGR00926        90 LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC-----------FGCQD  158 (654)
T ss_pred             HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----------cccCc
Confidence            3444444555566666666554422 22   356677888888999999999888877533100           00111


Q ss_pred             chhHHHHHHHHHHHHHHHHHHhhccc
Q psy13668        442 EWRVVFWTAFFVMLITNIIYCFMGSG  467 (513)
Q Consensus       442 ~~~~~f~~~a~~~~~~~~~~~~~~~~  467 (513)
                      +|+.+|.+.+++++++.+++....+.
T Consensus       159 ~~~~aF~i~~i~m~ia~lvf~~g~k~  184 (654)
T TIGR00926       159 CYPLAFGVPAILMILALIVFMAGSKM  184 (654)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhccc
Confidence            79999999999999999887664443

>KOG3762|consensus

Probab=88.96  E-value=0.17  Score=52.27  Aligned_cols=68  Identities=12%  Similarity=0.030  Sum_probs=52.6

Q ss_pred             HHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHH-HHHHHH
Q psy13668        176 GLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPG-LGILAA  244 (513)
Q Consensus       176 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~-~~~~~l  244 (513)
                      .+-.+...++.|+.+ +|+++.+.|.+...--+..+++.+++|.++||+.+||....+..+.. ...+++
T Consensus        26 ~~g~l~pll~vy~kQ-LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll   94 (618)
T KOG3762|consen   26 RFGSLFPLLAVYFKQ-LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLL   94 (618)
T ss_pred             cccccchHHHHHHHH-cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhe
Confidence            334455677888876 69999999999999999999999999999999987766666555444 333443

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=86.80  E-value=44  Score=35.05  Aligned_cols=78  Identities=8%  Similarity=0.030  Sum_probs=39.4

Q ss_pred             chhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh---hhHHhchhHHHHHHHHHhhhhhcCCCcccch
Q psy13668        153 PWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS---VDLISGWPNRSVIVTYKMRTILSGPRLTSPF  229 (513)
Q Consensus       153 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~---~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~  229 (513)
                      +++.++++|-...+++...+.+.....+....-..+++.+--+.+-   .|-.....++..++-..+++.+.+|.|-+..
T Consensus       272 s~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~  351 (491)
T PF03219_consen  272 SFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTA  351 (491)
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            4566777777776666665555544444433334444433222111   2333444455555555666666666554443


Q ss_pred             h
Q psy13668        230 D  230 (513)
Q Consensus       230 ~  230 (513)
                      .
T Consensus       352 A  352 (491)
T PF03219_consen  352 A  352 (491)
T ss_pred             H
Confidence            3

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=85.56  E-value=1  Score=42.53  Aligned_cols=34  Identities=18%  Similarity=0.272  Sum_probs=27.3

Q ss_pred             CCCCccchhhhhhhhhhhcccccccceeeeecCC
Q psy13668        389 LSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  422 (513)
Q Consensus       389 ~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~  422 (513)
                      -.|++||++.|+.-....+++++-..+...+.++
T Consensus       124 NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~  157 (250)
T PF06813_consen  124 NFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD  157 (250)
T ss_pred             hCccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence            4478999999999999888888777776666665

>KOG3810|consensus

Probab=85.31  E-value=34  Score=33.95  Aligned_cols=143  Identities=6%  Similarity=-0.126  Sum_probs=77.2

Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCc-chhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668        156 KIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHF-SITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS  234 (513)
Q Consensus       156 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~  234 (513)
                      ...+||+...-.+=..+..+++|-+..+......+..-- ...--|..-....+.++++.+..|++.-.+.|..-...+.
T Consensus       229 ~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~  308 (433)
T KOG3810|consen  229 ECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAV  308 (433)
T ss_pred             HHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHH
Confidence            345666665555555666777888887777777665311 1122344555667778888899999988777664333332


Q ss_pred             --HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHH
Q psy13668        235 --VGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALS  298 (513)
Q Consensus       235 --~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~  298 (513)
                        ...+-+++.+.....-+.-......................+.++..|.-|...|+++++.-+-
T Consensus       309 ~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~l  374 (433)
T KOG3810|consen  309 GSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALIL  374 (433)
T ss_pred             HHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHH
Confidence              3333333333333331111111111111112222222345556666778888888887775443

>KOG3098|consensus

Probab=84.69  E-value=25  Score=36.37  Aligned_cols=148  Identities=12%  Similarity=-0.022  Sum_probs=86.5

Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHh--cCcch-hhhhHHhchhHHHHHHHHHhhhhhcCC---Ccccc
Q psy13668        155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDV--LHFSI-TSVDLISGWPNRSVIVTYKMRTILSGP---RLTSP  228 (513)
Q Consensus       155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~--~g~s~-~~~~~~~~~~~~~~~ig~~~~g~l~dr---~~~~~  228 (513)
                      -+.+++++...+....+..+.....+....|+-+.-.  .+.+. .-.++.....+.+..++....+.+++|   +|+++
T Consensus       234 ~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~  313 (461)
T KOG3098|consen  234 FKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKP  313 (461)
T ss_pred             HHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCc
Confidence            3456778887777776666565555666666665433  22222 234555666777888888888888877   56777


Q ss_pred             hhhHhhHHHHHHHHHHHh-cC-Ch--------------hHHHHHHHHHHHHH-HhhhhhhHHHhhcccCcchhHHHHHHH
Q psy13668        229 FDFSASVGPGLGILAASY-SG-CN--------------RLAVTVSFTLGMGT-MGAFLPSLKVNALDLSPNYAGTLMALV  291 (513)
Q Consensus       229 ~~~~~~~~~~~~~~~l~~-~~-~~--------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~g~~~gi~  291 (513)
                      ....+.++..++.++... .+ +.              .......+....+. -..........+.++.|++|..+.++.
T Consensus       314 ~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~  393 (461)
T KOG3098|consen  314 TVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLF  393 (461)
T ss_pred             chhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence            776666655554443321 11 11              01111122222222 234444556667777799998888887


Q ss_pred             HHHHhHHhhHH
Q psy13668        292 GGIGALSGTVS  302 (513)
Q Consensus       292 ~~~~~i~~~ig  302 (513)
                      -.-..+++.++
T Consensus       394 kfyq~~~s~v~  404 (461)
T KOG3098|consen  394 KFYQSVASCVA  404 (461)
T ss_pred             HHHHHHHHHHH
Confidence            77776666554

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=81.92  E-value=31  Score=35.68  Aligned_cols=106  Identities=11%  Similarity=-0.173  Sum_probs=48.0

Q ss_pred             hHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC-----------ChhHHHHHHHHHHHHHHhhh
Q psy13668        200 DLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG-----------CNRLAVTVSFTLGMGTMGAF  268 (513)
Q Consensus       200 ~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~~~~~~~~~~~~~  268 (513)
                      -.......++-.+|+.+..+..-...+.+.+.+..+.-.+...++....           .+.+...+...+....+|..
T Consensus       310 ~i~~~~fNvgD~vGR~~~~~~~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~  389 (437)
T TIGR00939       310 IICFLLFNLFDWLGRSLTSKFMWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL  389 (437)
T ss_pred             HHHHHHHHHHHHHHhhhhheeEeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence            3556667788888888665432111111233333333333332222211           11122222222212223333


Q ss_pred             hhhHHHh-hcccCcchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668        269 LPSLKVN-ALDLSPNYAGTLMALVGGIGALSGTVSPYL  305 (513)
Q Consensus       269 ~~~~~~~-~~~~~p~~~g~~~gi~~~~~~i~~~igp~l  305 (513)
                      ....... ...+.+++|..+..+....-.+|-.+|..+
T Consensus       390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l  427 (437)
T TIGR00939       390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL  427 (437)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333332 333446677777777776666666666544

>KOG1479|consensus

Probab=81.54  E-value=64  Score=32.71  Aligned_cols=47  Identities=13%  Similarity=-0.013  Sum_probs=28.6

Q ss_pred             hHHHHHHHhcCcc---hhhhhHHhch-hHHHHHHHHHhhhhhcCCCcccch
Q psy13668        183 DLPKYMKDVLHFS---ITSVDLISGW-PNRSVIVTYKMRTILSGPRLTSPF  229 (513)
Q Consensus       183 ~lp~~l~~~~g~s---~~~~~~~~~~-~~~~~~ig~~~~g~l~dr~~~~~~  229 (513)
                      -.|.+..+..+-.   ..-..+.... ..+...+|.+...+..++-.|+..
T Consensus       265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~  315 (406)
T KOG1479|consen  265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLT  315 (406)
T ss_pred             ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceeh
Confidence            5678877664322   2233344444 677888888888877776655433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	513
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	4e-12

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 67.4 bits (165), Expect = 4e-12
 Identities = 44/322 (13%), Positives = 88/322 (27%), Gaps = 36/322 (11%)

Query: 20  SNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA--------------WF 65
           SN  + +    I     M   G +         +F +    G                W+
Sbjct: 89  SNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWW 148

Query: 66  -----ALWMT-FATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFAS 119
                   ++ +     +G  +   +  L + +   W +  Y+     +           
Sbjct: 149 SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMR 208

Query: 120 SDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPT--PWGKIATSAPVIGLIIAQIGHDFGL 177
             P              +  +    + Q L         +  +  +  + IA +      
Sbjct: 209 DTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLR 268

Query: 178 FTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSG---------PRLTSP 228
           + I+   P Y+K+V HF++            + I      T+L G          R  + 
Sbjct: 269 YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPG----TLLCGWMSDKVFRGNRGATG 324

Query: 229 FDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLM 288
             F   V     +   + +G   + +     +G    G  +              AGT  
Sbjct: 325 VFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAA 384

Query: 289 ALVGGIGALSGTV-SPYLVGVL 309
              G  G L G+V +  +VG  
Sbjct: 385 GFTGLFGYLGGSVAASAIVGYT 406

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	513
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.82
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.77
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.69
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.67
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.64
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.52
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.48
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.34
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.34
2xut_A	524	Proton/peptide symporter family protein; transport	99.32
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.21
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.19
2xut_A	524	Proton/peptide symporter family protein; transport	99.05
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	98.65

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.82  E-value=2.3e-18  Score=176.82  Aligned_cols=282  Identities=12%  Similarity=0.060  Sum_probs=197.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH------HHH----H-----HHHH-----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG------LAW----F-----ALWM-----------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~------~~~----~-----~~~~-----------------   69 (513)
                      .++..+...++..++.++.|+++||+ |.|.++.+...+.      +.+    .     +...                 
T Consensus        64 ~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~  142 (451)
T 1pw4_A           64 LGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGR  142 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHhhhccchHHH
Confidence            67888899999999999999999999 9888776422211      111    1     0000                 


Q ss_pred             ----------------HHHhhhhhHHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccc
Q psy13668         70 ----------------TFATGAQIGNVVSMAVSGLLIRYLGG-WTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG  132 (513)
Q Consensus        70 ----------------~~~~~~~~g~~~~~~~~~~l~~~~~g-Wr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  132 (513)
                                      +......+|.++++.+++.+.+.. | ||+.|++.+++.++..++..++.+|+|++.+..    
T Consensus       143 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  217 (451)
T 1pw4_A          143 TMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWF-NDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLP----  217 (451)
T ss_dssp             HHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHT-CCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCC----
T ss_pred             HHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhhccCCHhhcCCC----
Confidence                            000111356677788888877777 8 999999988888877776667777766543221    


Q ss_pred             ccccccchhhh-------hccCCCCCC--chhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHh
Q psy13668        133 TAVMHKSNRFI-------FSFQNLPPT--PWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLIS  203 (513)
Q Consensus       133 ~~~~~~~~~~~-------~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~  203 (513)
                         ++++.+..       .+.++....  ..++.++++.++...+..++.....+.+..+.|.|+++.+|++..+.+.+.
T Consensus       218 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  294 (451)
T 1pw4_A          218 ---PIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAY  294 (451)
T ss_dssp             ---SCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHH
T ss_pred             ---ChhhhcccccccchhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence               11100000       000011111  146788999999999999999999999999999999998999999999999


Q ss_pred             chhHHHHHHHHHhhhhhcCCC--cccchhhHhhHHHH-HHHHHHHhcCC-hhHHHHHHHHHHHHHHhhhhhhHHHhhccc
Q psy13668        204 GWPNRSVIVTYKMRTILSGPR--LTSPFDFSASVGPG-LGILAASYSGC-NRLAVTVSFTLGMGTMGAFLPSLKVNALDL  279 (513)
Q Consensus       204 ~~~~~~~~ig~~~~g~l~dr~--~~~~~~~~~~~~~~-~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (513)
                      ....++.++++++.|++.||+  +||+....+..+.. ++++.+...+. +.........+...+.+...+.......+.
T Consensus       295 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  374 (451)
T 1pw4_A          295 FLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALEL  374 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence            999999999999999999999  88888777666555 55555555443 333222222222222344445555666677


Q ss_pred             Cc-chhHHHHHHHHHHHhH-HhhHHHHHHHHhccc
Q psy13668        280 SP-NYAGTLMALVGGIGAL-SGTVSPYLVGVLTPN  312 (513)
Q Consensus       280 ~p-~~~g~~~gi~~~~~~i-~~~igp~l~g~l~~~  312 (513)
                      .| +++|++.|+.+...++ ++.++|.+.|.+.+.
T Consensus       375 ~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~  409 (451)
T 1pw4_A          375 APKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF  409 (451)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             hchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            65 5699999999999999 999999999988874

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.77  E-value=8.6e-17  Score=164.45  Aligned_cols=272  Identities=11%  Similarity=0.009  Sum_probs=191.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHH--------------H------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALW--------------M------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~--------------~------------------   69 (513)
                      .++..+...++.+++.++.|.++||+ |.|.++.+...+..+..+..              .                  
T Consensus        63 ~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~  141 (438)
T 3o7q_A           63 AGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPF  141 (438)
T ss_dssp             HHHHHHHHHHHHHTTHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHh-cchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhhHHHhhhhHHHH
Confidence            67888899999999999999999999 98888764322211111100              0                  


Q ss_pred             ---------------HHHhhhhhHHHHHHHHHHHHH-hccCC------------------------chHHHHHHHHHHHH
Q psy13668         70 ---------------TFATGAQIGNVVSMAVSGLLI-RYLGG------------------------WTSVFYVFGAVGLA  109 (513)
Q Consensus        70 ---------------~~~~~~~~g~~~~~~~~~~l~-~~~~g------------------------Wr~~f~i~~~~~~~  109 (513)
                                     +......+|..+++.+++.+. .....                        ||+.|++.+.+.++
T Consensus       142 ~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~  221 (438)
T 3o7q_A          142 VTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLL  221 (438)
T ss_dssp             HHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHH
Confidence                           111111366778888888877 44412                        99999887777666


Q ss_pred             HHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHH-H
Q psy13668        110 WFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKY-M  188 (513)
Q Consensus       110 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~-l  188 (513)
                      ..++.++.  +.|+.++..       ++++      +++..+.+++++++++.++...+..++.....+.+..|+|.| +
T Consensus       222 ~~~~~~~~--~~p~~~~~~-------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (438)
T 3o7q_A          222 VALLIMLT--KFPALQSDN-------HSDA------KQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAV  286 (438)
T ss_dssp             HHHHHHHC--CCCCCTTTC-------CCCS------STTSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--cCCcccccc-------cccc------cccchhhhHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            55444332  222221111       1110      001112345788999999999999998888899999999999 9


Q ss_pred             HHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhh
Q psy13668        189 KDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAF  268 (513)
Q Consensus       189 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  268 (513)
                      ++.+|++..+.+.+.....++..+++++.|+++||++||+....+.++..++++.+.+.+.... ....+..+ .+.+..
T Consensus       287 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~~~~~  364 (438)
T 3o7q_A          287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVG-LIALTLCS-AFMSIQ  364 (438)
T ss_dssp             HHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHH-HHHTTH
T ss_pred             hccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHH-HHHHHH
Confidence            9888999999999999999999999999999999999999988888888777776666554332 22223333 334555


Q ss_pred             hhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        269 LPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       269 ~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .+.......+..|++++.+.++.. ...+++.++|.+.|.+.+.
T Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~g~l~~~  407 (438)
T 3o7q_A          365 YPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDA  407 (438)
T ss_dssp             HHHHHHHHHSSCGGGHHHHHHHHH-HTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhccccccchhhHHH-HHHHHHHHHHHHHHHHHHH
Confidence            566666666667666888888877 7789999999999888764

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.69  E-value=3.8e-16  Score=162.31  Aligned_cols=205  Identities=10%  Similarity=-0.013  Sum_probs=121.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh-ccCchHHHHHHHHHHHHHHHH---------------------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRY-LGGWTSVFYVFGAVGLAWFAL---------------------------------   67 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~-~~gwr~if~~~g~~~~~~~~~---------------------------------   67 (513)
                      .+...+...++..++.++.|+++|| + |.|.++.....+..+..+.                                 
T Consensus        56 ~~~~~~~~~~~~~~~~~~~g~l~dr~~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~  134 (491)
T 4aps_A           56 AASIMAIYASMVYLSGTIGGFVADRII-GARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVSTLVG  134 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTS-CHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence            6778888999999999999999999 8 9888876432221111100                                 


Q ss_pred             -------------HHHHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccc
Q psy13668         68 -------------WMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTA  134 (513)
Q Consensus        68 -------------~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  134 (513)
                                   .........+|..++|.+++.+.+.. |||+.|++.++..++..+...+..++..++.+..++... 
T Consensus       135 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  212 (491)
T 4aps_A          135 TLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAA-GYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLRPTDPL-  212 (491)
T ss_dssp             HHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCSCCSCCC-
T ss_pred             HHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhCcccccccccCCCCcc-
Confidence                         00111122366778888888888887 999999987766665554444333322111100000000 


Q ss_pred             ccccchhhhhcc---------------------------------------------CCCCCCchhhhccchhHHHHHHH
Q psy13668        135 VMHKSNRFIFSF---------------------------------------------QNLPPTPWGKIATSAPVIGLIIA  169 (513)
Q Consensus       135 ~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~l~~~~~~~~~l~  169 (513)
                       ++++.+...+.                                             .+.++.+.....+....+...+.
T Consensus       213 -~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (491)
T 4aps_A          213 -APEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHLRVVSYIPLFIA  291 (491)
T ss_dssp             -SHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC------------CTTHHHHHHH
T ss_pred             -ccchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHH
Confidence             00000000000                                             00000000111122234455555


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchh
Q psy13668        170 QIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFD  230 (513)
Q Consensus       170 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~  230 (513)
                      .++....+.....++|.|+++..+.+..+.+.+.....+...++.++.+++.||++||+..
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~  352 (491)
T 4aps_A          292 AVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPS  352 (491)
T ss_dssp             HHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---
T ss_pred             HHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCC
Confidence            5555556666777889999998888888889999999999999999999999999998653

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.67  E-value=3.7e-17  Score=163.86  Aligned_cols=267  Identities=16%  Similarity=0.139  Sum_probs=180.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-------HH-------------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-------WM-------------------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-------~~-------------------------   69 (513)
                      .+...+...++..++.++.|++.||+ |.|.++.....+..+....       +.                         
T Consensus        37 ~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~  115 (375)
T 2gfp_A           37 VQSVMGAYLLTYGVSQLFYGPISDRV-GRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRD  115 (375)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHTTS-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence            67888889999999999999999999 8877765322111110000       00                         


Q ss_pred             ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668         70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH  137 (513)
Q Consensus        70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  137 (513)
                                  .......+|..+++.+++.+.+.. +||+.|.+.+++.++..+...+..||+|+++          ++
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~  184 (375)
T 2gfp_A          116 LYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMW-NWRACYLFLLVLCAGVTFSMARWMPETRPVD----------AP  184 (375)
T ss_dssp             HHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHH-HHHHHHHHHHHHHHHHHCCCCCSSCCCSTTT----------CC
T ss_pred             HCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHCcccCCCC----------cc
Confidence                        001111366778888888887777 9999999887777665543333444432211          10


Q ss_pred             cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668        138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR  217 (513)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~  217 (513)
                      +         +..+.++++.+++|+++...+..++.....+.+..+.|.|+++.+|++..+.+.+.....++..++++..
T Consensus       185 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~  255 (375)
T 2gfp_A          185 R---------TRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFA  255 (375)
T ss_dssp             C---------CCTTTCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             c---------ccHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            0         1122334678889999999999999899999999999999999889999999999999999999999999


Q ss_pred             hhhcCCCcccchhhHhhHH-HHHHHH--HHHhcC-ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHH
Q psy13668        218 TILSGPRLTSPFDFSASVG-PGLGIL--AASYSG-CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGG  293 (513)
Q Consensus       218 g~l~dr~~~~~~~~~~~~~-~~~~~~--~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~  293 (513)
                      +++.||.+++.  ..+... ...+..  ...... .+.+.......+.....+...+.......+..|+++|++.|+.+.
T Consensus       256 ~~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~  333 (375)
T 2gfp_A          256 GRPNKRFSTLM--WQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGG  333 (375)
T ss_dssp             HTTTTHHHHHH--HHHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcccchHHHHHHH
Confidence            99999988722  222221 111111  111111 122222222222223344555666677777778889999999999


Q ss_pred             HHhHHhhHHHHHHHHhcc
Q psy13668        294 IGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       294 ~~~i~~~igp~l~g~l~~  311 (513)
                      ..++++.++|.+.|.+.+
T Consensus       334 ~~~~g~~~~~~~~g~l~~  351 (375)
T 2gfp_A          334 LQNIGSGVLASLSAMLPQ  351 (375)
T ss_dssp             HHHHHHHCCSTTCTHHHH
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999998887754

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.64  E-value=2e-15  Score=153.69  Aligned_cols=276  Identities=11%  Similarity=0.043  Sum_probs=171.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH------HH---HH-HH-----H------------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG------LA---WF-AL-----W------------------   68 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~------~~---~~-~~-----~------------------   68 (513)
                      .+...+...++..++.++.|+++||+ |.|.++.+...+.      ..   +. ..     .                  
T Consensus        45 ~g~~~~~~~~~~~i~~~~~G~lsDr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  123 (417)
T 2cfq_A           45 TGIIFAAISLFSLLFQPLFGLLSDKL-GLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAP  123 (417)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHTTS-TTCCHHHHHHHHTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSSTTHHHHTTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence            67888888999999999999999999 8888766432111      00   00 00     0                  


Q ss_pred             ---HHHH--------------hhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668         69 ---MTFA--------------TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY  131 (513)
Q Consensus        69 ---~~~~--------------~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  131 (513)
                         ....              ....+|..++|.+++.+.+ . +||..|++.++..++..+.++ +.+++|.+.+     
T Consensus       124 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~-~-~~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~-----  195 (417)
T 2cfq_A          124 AVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT-I-NNQFVFWLGSGCALILAVLLF-FAKTDAPSSA-----  195 (417)
T ss_dssp             HHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHH-H-CSHHHHTTTTTTTTTHHHHSC-SSCCCCSCSS-----
T ss_pred             HHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH-h-chhHHHHHHHHHHHHHHHHHH-HcCccccccc-----
Confidence               0000              0113567788888888776 4 899999876665443332222 2222221111     


Q ss_pred             cccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCc---chhhhhHHhchhHH
Q psy13668        132 GTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHF---SITSVDLISGWPNR  208 (513)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~---s~~~~~~~~~~~~~  208 (513)
                          ++++++. .+.++.+..++++++++++++...+..+.....++.+..++|.|+++.++.   +....+.......+
T Consensus       196 ----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  270 (417)
T 2cfq_A          196 ----TVANAVG-ANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGEL  270 (417)
T ss_dssp             ----CSSSSSS-SCCCCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHH
T ss_pred             ----ccccccc-cccccccHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHH
Confidence                0000000 000011112345678899988777766665666666778899999876653   23445677777778


Q ss_pred             HHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHH
Q psy13668        209 SVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTL  287 (513)
Q Consensus       209 ~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~  287 (513)
                      +..++.+..|+++||++||+....+.++.+++.+.+...++........+..+.+ .....+.......|..| +.||++
T Consensus       271 ~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~p~~~~g~~  349 (417)
T 2cfq_A          271 LNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFE-VPFLLVGCFKYITSQFEVRFSATI  349 (417)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHH-HHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHH
Confidence            8889999999999999999988877777777666665544333222222222222 23333334556667765 569999


Q ss_pred             HHHH-HHHHhHHhhHHHHHHHHhccc
Q psy13668        288 MALV-GGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       288 ~gi~-~~~~~i~~~igp~l~g~l~~~  312 (513)
                      .+.. +....+++.++|.+.|.+.+.
T Consensus       350 ~g~~~~~~~~lg~~~gp~l~G~l~~~  375 (417)
T 2cfq_A          350 YLVCFCFFKQLAMIFMSVLAGNMYES  375 (417)
T ss_dssp             HHHHHTTTHHHHHHHHTHHHHTHHHH
T ss_pred             HHHHHHHHHhHHHHHhhhhHHHHHHh
Confidence            9994 888899999999999988763

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.52  E-value=2.3e-12  Score=133.69  Aligned_cols=149  Identities=11%  Similarity=0.066  Sum_probs=98.2

Q ss_pred             ccchhHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHH
Q psy13668        158 ATSAPVIGLIIAQIG-HDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVG  236 (513)
Q Consensus       158 l~~~~~~~~~l~~~~-~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~  236 (513)
                      ++.++.........+ .....+.+..|.|.+.+ ..+.+..+.........+...++.++.+++.||+|||+....+..+
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~  351 (491)
T 4gc0_A          273 FGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFK-TLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALG  351 (491)
T ss_dssp             SCCTHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHH
T ss_pred             hcccHHHHHHHHHHHHHHhhhhHHHhcchHHHH-hcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHH
Confidence            334444443333333 33344455556666555 4577887777788888899999999999999999999998888877


Q ss_pred             HHHHHHHHHhc---CChhHHHHH-HHHHHHHHHhhhhhhHHHhhcccCcc-hhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668        237 PGLGILAASYS---GCNRLAVTV-SFTLGMGTMGAFLPSLKVNALDLSPN-YAGTLMALVGGIGALSGTVSPYLVG  307 (513)
Q Consensus       237 ~~~~~~~l~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~gi~~~~~~i~~~igp~l~g  307 (513)
                      ..++++.+...   .......+. .+....++.....+..+....|++|. .|+++.|+.+..+.+++.+++.+..
T Consensus       352 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p  427 (491)
T 4gc0_A          352 MAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFP  427 (491)
T ss_dssp             HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            77666554422   222222222 22222333334445566778888875 5999999999998888877765543

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.48  E-value=8.2e-14  Score=142.72  Aligned_cols=148  Identities=10%  Similarity=0.047  Sum_probs=113.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG  240 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~  240 (513)
                      +.++..++..+......+.+...+|.+.++ + .|..+.+++.+...++..++.+..|+++||+|||+.+..+.++.+++
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~  105 (451)
T 1pw4_A           28 QIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-G-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV  105 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHTSHHHHHHHTTSS-T-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHH
Confidence            445555566666666656666777777655 5 89999999999999999999999999999999999999999988888


Q ss_pred             HHHHHh----cCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        241 ILAASY----SGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       241 ~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      .++...    .++.....+..+..+.+ .+...+.......|..| ++|+.+.|+.+....+|..++|.+.+.+.+
T Consensus       106 ~~~~~~~~~~~~~~~~l~~~~~l~G~~-~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~  180 (451)
T 1pw4_A          106 MLFMGFVPWATSSIAVMFVLLFLCGWF-QGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMA  180 (451)
T ss_dssp             HHHHHHCHHHHSSSSHHHHHHHHHHHH-HHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred             HHHHHhhhhccccHHHHHHHHHHHHHH-hhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888777    54444433333333333 44555666677777775 779999999999999999999999988654

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.34  E-value=4.6e-12  Score=129.17  Aligned_cols=147  Identities=12%  Similarity=-0.024  Sum_probs=111.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668        162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI  241 (513)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~  241 (513)
                      .+....+..+............+|. +++.+|.|..+.+++.+...++..++.+..|+++||+|||+.+..+.++.+++.
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~  105 (438)
T 3o7q_A           27 PFALLCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGA  105 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHH
Confidence            3444455555555555556666766 456689999999999999999999999999999999999999999998888888


Q ss_pred             HHH---HhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668        242 LAA---SYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLT  310 (513)
Q Consensus       242 ~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~  310 (513)
                      ++.   ...++.....+..+..+. +.+...+.......+..| ++|+.+.++.+....+|..++|.+.+.+.
T Consensus       106 ~~~~~~~~~~~~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~  177 (438)
T 3o7q_A          106 ALFWPAAEIMNYTLFLVGLFIIAA-GLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI  177 (438)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred             HHHHhccccccHHHHHHHHHHHHh-hHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777   444443333333333333 344555566667777765 67999999999999999999999998887

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.34  E-value=6.6e-14  Score=142.50  Aligned_cols=156  Identities=10%  Similarity=-0.000  Sum_probs=100.4

Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhH
Q psy13668        156 KIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASV  235 (513)
Q Consensus       156 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~  235 (513)
                      ..+|+++++......+.....+.....++|.|+++.+|+|..+.+++.+...++..++++..|+++||+|||+....+..
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~~~   81 (417)
T 2cfq_A            2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIIT   81 (417)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence            36889999988888888777777788899999998899999999999999999999999999999999999998877665


Q ss_pred             HHHHHHHHH---HhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC---cchhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668        236 GPGLGILAA---SYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS---PNYAGTLMALVGGIGALSGTVSPYLVGVL  309 (513)
Q Consensus       236 ~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~g~~~gi~~~~~~i~~~igp~l~g~l  309 (513)
                      ...++...+   .+.............++....+...+.......+..   +++++...|..+....+|..++|.+.+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l  161 (417)
T 2cfq_A           82 GMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIM  161 (417)
T ss_dssp             HTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSSTTHHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            443311111   110000000000000000001111111111111111   23456667777777788888888888777


Q ss_pred             cc
Q psy13668        310 TP  311 (513)
Q Consensus       310 ~~  311 (513)
                      .+
T Consensus       162 ~~  163 (417)
T 2cfq_A          162 FT  163 (417)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.32  E-value=8.5e-12  Score=130.57  Aligned_cols=150  Identities=9%  Similarity=-0.080  Sum_probs=118.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC------cchhhhhHHhchhHHHHHHHHHhhhhhcCCC-cccchhhHh
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH------FSITSVDLISGWPNRSVIVTYKMRTILSGPR-LTSPFDFSA  233 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g------~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~  233 (513)
                      +.++...+..++....+++...++|.|+++.+|      +|..+.+++.+...++..++.+..|+++||+ |||+....+
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~   91 (524)
T 2xut_A           12 RQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWL   91 (524)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence            456677788888888999999999999999899      9999999999999999999999999999999 999999998


Q ss_pred             hHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHH---HHHHHhHHhhHHHHHHHH
Q psy13668        234 SVGPGLGILAASYSG-CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMAL---VGGIGALSGTVSPYLVGV  308 (513)
Q Consensus       234 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi---~~~~~~i~~~igp~l~g~  308 (513)
                      .++.+++.+++...+ +........+..+. +.+...+.......|..| ++|+.+.+.   .+...++|..++|.+.+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~  170 (524)
T 2xut_A           92 SLIYCVGHAFLAIFEHSVQGFYTGLFLIAL-GSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPL  170 (524)
T ss_dssp             HHHHHHHHHHHHHTSSCHHHHHHHHHHHHH-HHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTH
T ss_pred             HHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888888777766 43333333333333 344555666666777764 568766655   888999999999999888


Q ss_pred             hcc
Q psy13668        309 LTP  311 (513)
Q Consensus       309 l~~  311 (513)
                      +.+
T Consensus       171 l~~  173 (524)
T 2xut_A          171 LLK  173 (524)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            765

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.21  E-value=2.6e-11  Score=121.11  Aligned_cols=146  Identities=13%  Similarity=-0.030  Sum_probs=110.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHH
Q psy13668        165 GLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAA  244 (513)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l  244 (513)
                      ..++..++.......+...+|.+ .+.+|.|..+.+++.+...++..++.+..|+++||+|||+....+.+...++.+..
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~   82 (375)
T 2gfp_A            4 MLVLLVAVGQMAQTIYIPAIADM-ARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVA   82 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-HTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence            34455555556666666677765 45689999999999999999999999999999999999999999888888887777


Q ss_pred             HhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668        245 SYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPN  312 (513)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~  312 (513)
                      ...++........+.. ....+...+.......|.. +++|+.+.++.+....++..++|.+.+.+.+.
T Consensus        83 ~~~~~~~~l~~~~~l~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~  150 (375)
T 2gfp_A           83 VTTSSLTVLIAASAMQ-GMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTM  150 (375)
T ss_dssp             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCH
T ss_pred             HHhccHHHHHHHHHHH-HHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence            6654322222222222 2233445555666667776 47799999999999999999999999998874

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.19  E-value=5.6e-10  Score=115.56  Aligned_cols=144  Identities=14%  Similarity=0.086  Sum_probs=106.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-----cCcchhhhhHHhchhHHHHHHHHHhhhhhcCC-CcccchhhHhh
Q psy13668        161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDV-----LHFSITSVDLISGWPNRSVIVTYKMRTILSGP-RLTSPFDFSAS  234 (513)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~  234 (513)
                      +.++...+..++....++....++|.|+++.     +|.|..+.+++.+...++..++++..|+++|| +|||+.+..+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~   92 (491)
T 4aps_A           13 LGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGG   92 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH
Confidence            4577788888888899999999999999998     99999999999999999999999999999999 89999999999


Q ss_pred             HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cch--hHHHHHHHHHHHhHHhhHHHHH
Q psy13668        235 VGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNY--AGTLMALVGGIGALSGTVSPYL  305 (513)
Q Consensus       235 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~--~g~~~gi~~~~~~i~~~igp~l  305 (513)
                      ++.+++.+.+...++........+..+.+ .+...+.......|.. +++  |+.+.++.+...++|..++|.+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~  165 (491)
T 4aps_A           93 VLIMLGHIVLALPFGASALFGSIILIIIG-TGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLI  165 (491)
T ss_dssp             HHHHHHHHHHHSCCSTTHHHHHHHHHHHH-HHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHH
Confidence            98888888887766554444444433333 3334444445555544 233  5555555555555555555443

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.05  E-value=1.9e-09  Score=112.60  Aligned_cols=114  Identities=8%  Similarity=-0.084  Sum_probs=69.0

Q ss_pred             hhhHHhchhHHHHHHHHHhhhhhc----CCCccc----chhhHhhHHHHHHHHHHHhcC--------ChhHHHHHHHHHH
Q psy13668        198 SVDLISGWPNRSVIVTYKMRTILS----GPRLTS----PFDFSASVGPGLGILAASYSG--------CNRLAVTVSFTLG  261 (513)
Q Consensus       198 ~~~~~~~~~~~~~~ig~~~~g~l~----dr~~~~----~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~  261 (513)
                      ..+.+.....++..++.++.+++.    ||.++|    +....+.++.+++.+.+....        .+.........+.
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  415 (524)
T 2xut_A          336 EPAMMQALNPLLVMLLIPFNNFVLYPAIERMGVKLTALRKMGAGIAITGLSWIVVGTIQLMMDGGSALSIFWQILPYALL  415 (524)
T ss_dssp             CHHHHHTTSGGGHHHHGGGTTTC------------CCHHHHHTHHHHHHHHHHTTTTTTTTTTTTCCCCSHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHH
Confidence            456666666677777777777764    444332    234455555556555554432        2223333333322


Q ss_pred             HHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668        262 MGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP  311 (513)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~  311 (513)
                      ....+...+.......+..| ++||+++|+.++..++++.++|.+.+.+.+
T Consensus       416 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~~~~  466 (524)
T 2xut_A          416 TFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANVSVKS  466 (524)
T ss_dssp             HHHHHHHHHHHTTTHHHHCCTTCCTTTHHHHGGGHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            33344455556666666665 669999999999999999999999988775

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=98.65  E-value=1.6e-07  Score=97.02  Aligned_cols=111  Identities=10%  Similarity=-0.077  Sum_probs=81.4

Q ss_pred             hhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC-----------------ChhH-HHHHHH
Q psy13668        197 TSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG-----------------CNRL-AVTVSF  258 (513)
Q Consensus       197 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~~~~-~~~~~~  258 (513)
                      .+.+++.+...++.++|.++.|+++||+|||+.+..+.++..++.+...+..                 .+.. ..+.-+
T Consensus        55 ~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~  134 (491)
T 4gc0_A           55 SLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRI  134 (491)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHH
Confidence            4567788888999999999999999999999999999988888877766421                 1222 222333


Q ss_pred             HHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHH
Q psy13668        259 TLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGV  308 (513)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~  308 (513)
                      ..++ ..+...+.......|..| ++|+...+..+....++...++.+...
T Consensus       135 l~G~-g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~  184 (491)
T 4gc0_A          135 IGGI-GVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYF  184 (491)
T ss_dssp             HHHH-HHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchh
Confidence            3333 345556667777778875 679999999888888777777665543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	513
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.8
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.63
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.39
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.07

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=8.5e-20  Score=184.37  Aligned_cols=203  Identities=10%  Similarity=0.030  Sum_probs=145.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH----------------HH----------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL----------------WM----------------   69 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~----------------~~----------------   69 (513)
                      .|+..+...++.+++.++.|.++||+ |.|.++.+...+..+...+                ..                
T Consensus        61 ~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  139 (447)
T d1pw4a_          61 LGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGR  139 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHH
Confidence            67888899999999999999999999 9988876432221111100                00                


Q ss_pred             ----------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccc
Q psy13668         70 ----------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT  133 (513)
Q Consensus        70 ----------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  133 (513)
                                      +......+|..+++.+++.+.....+||+.|++.+.+.++..++.+++.++.|++.+..     
T Consensus       140 ~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  214 (447)
T d1pw4a_         140 TMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLP-----  214 (447)
T ss_dssp             HHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCC-----
T ss_pred             HHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcccchhhcccc-----
Confidence                            01111124555666666665555448999999999888888888888888777654332     


Q ss_pred             cccccchhhh---------hccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhc
Q psy13668        134 AVMHKSNRFI---------FSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISG  204 (513)
Q Consensus       134 ~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~  204 (513)
                        ..++.+..         ++....++...+..++++.++......++.....+....|.|.|+++.++++..+.+....
T Consensus       215 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (447)
T d1pw4a_         215 --PIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYF  292 (447)
T ss_dssp             --SCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHH
T ss_pred             --hhhhhhhhcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhh
Confidence              11111000         0011112223466788999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhhhhhcCCCcccchhhH
Q psy13668        205 WPNRSVIVTYKMRTILSGPRLTSPFDFS  232 (513)
Q Consensus       205 ~~~~~~~ig~~~~g~l~dr~~~~~~~~~  232 (513)
                      ...+...++.++.|++.||.+|++....
T Consensus       293 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~  320 (447)
T d1pw4a_         293 LYEYAGIPGTLLCGWMSDKVFRGNRGAT  320 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSTTCHHHH
T ss_pred             cchhhhhhhhhhhhhhhhhccccccccc
Confidence            9999999999999999999998765443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=6.3e-14  Score=138.00  Aligned_cols=254  Identities=11%  Similarity=0.044  Sum_probs=142.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHH---------------HHHH--------------
Q psy13668         22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALW---------------MTFA--------------   72 (513)
Q Consensus        22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~---------------~~~~--------------   72 (513)
                      .|+..+...++..++.++.|+++||+ |.|.++........+.....               ....              
T Consensus        45 ~g~i~s~~~l~~~i~~~~~G~l~Dr~-grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (417)
T d1pv7a_          45 TGIIFAAISLFSLLFQPLFGLLSDKL-GLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAP  123 (417)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHHHHHH-TTCTHHHHHHHHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcccccccchhh
Confidence            78888999999999999999999999 88877664322111111000               0000              


Q ss_pred             ---------------------hhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668         73 ---------------------TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY  131 (513)
Q Consensus        73 ---------------------~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  131 (513)
                                           .....+..+++.+++.+.+.  +|+..+........+...+..+..++.|++.+..   
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  198 (417)
T d1pv7a_         124 AVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI--NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVA---  198 (417)
T ss_dssp             HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSS---
T ss_pred             cccccccchhhhhHHHHHHHhhhhccccccccccccccccc--cccccccchhhHHHHHHHHHHHHhcccccchhhh---
Confidence                                 00013445666666666554  6777777666666666555555655554433221   


Q ss_pred             cccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHh---cCcchhhhhHHhchhHH
Q psy13668        132 GTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDV---LHFSITSVDLISGWPNR  208 (513)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~---~g~s~~~~~~~~~~~~~  208 (513)
                          ++++    .+..+.......+.++++..+....................+.+....   .+.+....+.......+
T Consensus       199 ----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (417)
T d1pv7a_         199 ----NAVG----ANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGEL  270 (417)
T ss_dssp             ----HHHH----SCCCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred             ----hhhh----hhcccccccccccccccccccchhhhhHHHHHHHHhhhccccccccccccccccchhhhccccccccc
Confidence                1110    001111111223444444444444444444344344444444433322   23445566777778888


Q ss_pred             HHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHH
Q psy13668        209 SVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTL  287 (513)
Q Consensus       209 ~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~  287 (513)
                      +..++....+++.||.++|+....+.++.+++.+.+...++........+..+.+ .+...+.......+..| ++||++
T Consensus       271 ~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~  349 (417)
T d1pv7a_         271 LNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFE-VPFLLVGCFKYITSQFEVRFSATI  349 (417)
T ss_dssp             HHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHSCGGGHHHH
T ss_pred             ccccchhhhhhhhcccccccchhhhHHHHHHhhhccccccccchhhHHHHHHHHH-HHHHHHHHHHHHHHHCCHhHHHHH
Confidence            8999999999999999999999998888888888777776655444433333333 23333333334344332 335555


Q ss_pred             HHH
Q psy13668        288 MAL  290 (513)
Q Consensus       288 ~gi  290 (513)
                      .|+
T Consensus       350 ~~~  352 (417)
T d1pv7a_         350 YLV  352 (417)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.39  E-value=2.2e-13  Score=134.00  Aligned_cols=93  Identities=10%  Similarity=-0.084  Sum_probs=82.6

Q ss_pred             hccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHH
Q psy13668        157 IATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVG  236 (513)
Q Consensus       157 ~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~  236 (513)
                      .+|||++|...+..++..........++|.|++|.+|.|..+.+++.+...++..++++..|+++||+|||+....+..+
T Consensus         3 ~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~   82 (417)
T d1pv7a_           3 YLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITG   82 (417)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHH
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence            57899999999999998888888888999999999999999999999999999999999999999999999998888777


Q ss_pred             HHHHHHHHHhcCC
Q psy13668        237 PGLGILAASYSGC  249 (513)
Q Consensus       237 ~~~~~~~l~~~~~  249 (513)
                      ..++.........
T Consensus        83 ~~~~~~~~~~~~~   95 (417)
T d1pv7a_          83 MLVMFAPFFIFIF   95 (417)
T ss_dssp             HHHTHHHHHHHTH
T ss_pred             HHHHHHHHHHhhh
Confidence            7776666555443

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.07  E-value=1.9e-11  Score=121.99  Aligned_cols=58  Identities=10%  Similarity=-0.041  Sum_probs=49.0

Q ss_pred             HHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHH
Q psy13668        186 KYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAA  244 (513)
Q Consensus       186 ~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l  244 (513)
                      .+++| +|+|..+.+++.+...++..++.+..|+++||+|||+....+.++.+++.++.
T Consensus        49 p~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~  106 (447)
T d1pw4a_          49 PYLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFM  106 (447)
T ss_dssp             HHTTS-STTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhc
Confidence            35555 79999999999999999999999999999999999999888776665554443