Psyllid ID: psy13839

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410---
Protein Sequence
MFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAKDKLHSKPTNSSSIKHLEKIVFFFFSGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVRRVV
Secondary Structure (PSIPRED)
ccEEEEEcccEEEEEEEcccccEEEEEEEEEEccEEEEEEccEEEEEEEEccccccccEEEEEcccccccccccccccccEEEEEEEEcccEEEEEEEEcccccEEEEEEEEEccEEEEEEEccEEEEEEEEEcccccccEEEEEEEEEEccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHcccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cEEEEEcccEEEEEEEEcccccEEEEEEEEEcccEEEEEEEccEEEEEEcccccccccEEEEEEEEcccccccccccccEEEEEEEEEcccEEEEEEEEcccccEEEEEEEEEcccEEEEEEcccEEEEEEcccccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHccccccHHHHHEEHEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccHHHHccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccHccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mfeiseggfldidvritgpdgniiyqgeressgkytfsahmSGVYTYCfsnqmstmtpKVVMFNMEvlstqpseddkgekgLMFEiseggfldidvritgpdgniiyqgeressgkytfsahmSGVYTYCfsnqmstmtpKVVMFNMEvlstqpseddkgekgnryaknisakpkglnpakdklyskptkfvirtadfllfcppsfdlgMIKLLFlstqpseddkgekgepnLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVNHakdklhskptnsssIKHLKKLLNHAkdklhskptnsssikHLEKIVFFFFSGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVRRVV
Flexible Loop (DISEMBL)
mfeiseggfldidvritgpdgniIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLStqpseddkgEKGLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLStqpseddkgekgnryaknisakpkglnpakdklysKPTKFVIRTADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVNHAkdklhskptnsssiKHLKKLLNHAKDKlhskptnsssikhLEKIVFFFFSGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSinestnsrvvWWSFFEAVVLVTMTIGQIyylkrffevrrvv
Low Complexity Region (SEG)
MFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAKDKLHSKPTNSSSIKHLEKIVFFFFSGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVRRVV
Disordered region (IsUnstruct)
******GGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEV**************LMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEV***********************************YSKPTKFVIRTADFLLFCPPSFDLGMIKLLFL***************************************************TNSRVVWWSFFEAVVLVNHA**************************************KHLEKIVFFFFSGEPNLQDMIRQL******************RIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVR***
Disordered Region (DISOPRED)
MFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLLFCPPSFDLGMIKLLFLSTQPSE**************IRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAKDKLHSKPTNSSSIKHLEKIVFFFFSGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVRRVV
Disordered Region (DISEMBL)
MFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLST***********NRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLLFCPPSFDLGMIKLLFLSTQ**********EPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAKDKLHSKPTNSSSIKHLEKIVFFFFSGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVRRVV
Disordered Region (DISPRO)
MFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLLFCPPSFDLGMIKLLFLSTQPSE*****KGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAKDKLHSKPTNSSSIKHLEKIVFFFFSGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVR***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAKDKLHSKPTNSSSIKHLEKIVFFFFSGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVRRVV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	413	2.2.26 [Sep-21-2011]
P49020	196	Transmembrane emp24 domai	yes	N/A	0.334	0.704	0.446	7e-42
Q9R0Q3	201	Transmembrane emp24 domai	yes	N/A	0.334	0.686	0.446	8e-42
Q63524	201	Transmembrane emp24 domai	yes	N/A	0.334	0.686	0.446	8e-42
Q15363	201	Transmembrane emp24 domai	yes	N/A	0.334	0.686	0.446	8e-42
A7SXK3	203	Transmembrane emp24 domai	N/A	N/A	0.334	0.679	0.436	5e-37
O17528	203	Suppressor/enhancer of li	yes	N/A	0.188	0.384	0.7	6e-28
Q769F9	205	Transmembrane emp24 domai	yes	N/A	0.329	0.663	0.316	3e-18
Q9P7I9	199	Endosomal protein P24B OS	yes	N/A	0.162	0.336	0.573	7e-18
Q54BN0	209	Transmembrane emp24 domai	no	N/A	0.329	0.650	0.286	2e-14
P32803	203	Endosomal protein P24B OS	yes	N/A	0.181	0.369	0.461	4e-13

>sp|P49020|TMED2_CRIGR Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Cricetulus griseus GN=TMED2 PE=1 SV=1

 Score =  171 bits (434), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 91/204 (44%), Positives = 116/204 (56%), Gaps = 66/204 (32%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GL+FE++EGGFLDIDV ITGPD   IY+G+RESSGKYTF+AHM G Y +CFSN+MSTMTP
Sbjct: 39  GLIFEVAEGGFLDIDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTP 98

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           K+VMF +                     +I   PKG                        
Sbjct: 99  KIVMFTI---------------------DIGEAPKG------------------------ 113

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                +D + E  +  L++MI +L  ++T+VKHEQEYM VR+RI
Sbjct: 114 ---------------------QDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERI 152

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HR+IN++TNSRVV WSFFEA+VLV
Sbjct: 153 HRAINDNTNSRVVLWSFFEALVLV 176

Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway but also in post-Golgi membranes. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side. In COPII vesicle-mediated anterograde transport involved in the transport of GPI-anchored proteins and proposed to act togther with TMED10 as their cargo receptor; the function specifically implies SEC24C and SEC24D of the COPII vesicle coat and lipid raft-like microdomains of the ER. Recognizes GPI anchors structural remodeled in the ER by PGAP1 and MPPE1. In COPI vesicle-mediated retrograde transport inhibits the GTPase-activating activity of ARFGAP1 towards ARF1 thus preventing immature uncoating and allowing cargo selection to take place. Involved in trafficking of G protein-coupled receptors (GPCRs). Regulates F2RL1, OPRM1 and P2RY4 exocytic trafficking from the Golgi to the plasma membrane thus contributing to receptor resensitization. Facilitates CASR maturation and stabilization in the early secretory pathway and increases CASR plasma membrane targeting. Proposed to be involved in organization of intracellular membranes such as the maintenance of the Golgi apparatus. May also play a role in the biosynthesis of secreted cargo such as eventual processing.
Cricetulus griseus (taxid: 10029)

>sp|Q9R0Q3|TMED2_MOUSE Transmembrane emp24 domain-containing protein 2 OS=Mus musculus GN=Tmed2 PE=1 SV=1

 Score =  171 bits (434), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/204 (44%), Positives = 116/204 (56%), Gaps = 66/204 (32%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GL+FE++EGGFLDIDV ITGPD   IY+G+RESSGKYTF+AHM G Y +CFSN+MSTMTP
Sbjct: 44  GLIFEVAEGGFLDIDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTP 103

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           K+VMF +                     +I   PKG                        
Sbjct: 104 KIVMFTI---------------------DIGEAPKG------------------------ 118

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                +D + E  +  L++MI +L  ++T+VKHEQEYM VR+RI
Sbjct: 119 ---------------------QDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERI 157

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HR+IN++TNSRVV WSFFEA+VLV
Sbjct: 158 HRAINDNTNSRVVLWSFFEALVLV 181

Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway but also in post-Golgi membranes. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side. In COPII vesicle-mediated anterograde transport involved in the transport of GPI-anchored proteins and proposed to act togther with TMED10 as their cargo receptor; the function specifically implies SEC24C and SEC24D of the COPII vesicle coat and lipid raft-like microdomains of the ER. Recognizes GPI anchors structural remodeled in the ER by PGAP1 and MPPE1. In COPI vesicle-mediated retrograde transport inhibits the GTPase-activating activity of ARFGAP1 towards ARF1 thus preventing immature uncoating and allowing cargo selection to take place. Involved in trafficking of G protein-coupled receptors (GPCRs). Regulates F2RL1, OPRM1 and P2RY4 exocytic trafficking from the Golgi to the plasma membrane thus contributing to receptor resensitization. Facilitates CASR maturation and stabilization in the early secretory pathway and increases CASR plasma membrane targeting. Proposed to be involved in organization of intracellular membranes such as the maintenance of the Golgi apparatus. May also play a role in the biosynthesis of secreted cargo such as eventual processing (By similarity). Required for morphogenesis of embryo and placenta.

Mus musculus (taxid: 10090)

>sp|Q63524|TMED2_RAT Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus GN=Tmed2 PE=1 SV=1

 Score =  171 bits (434), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/204 (44%), Positives = 116/204 (56%), Gaps = 66/204 (32%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GL+FE++EGGFLDIDV ITGPD   IY+G+RESSGKYTF+AHM G Y +CFSN+MSTMTP
Sbjct: 44  GLIFEVAEGGFLDIDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTP 103

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           K+VMF +                     +I   PKG                        
Sbjct: 104 KIVMFTI---------------------DIGEAPKG------------------------ 118

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                +D + E  +  L++MI +L  ++T+VKHEQEYM VR+RI
Sbjct: 119 ---------------------QDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERI 157

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HR+IN++TNSRVV WSFFEA+VLV
Sbjct: 158 HRAINDNTNSRVVLWSFFEALVLV 181

Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway but also in post-Golgi membranes. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side. In COPII vesicle-mediated anterograde transport involved in the transport of GPI-anchored proteins and proposed to act togther with TMED10 as their cargo receptor; the function specifically implies SEC24C and SEC24D of the COPII vesicle coat and lipid raft-like microdomains of the ER. Recognizes GPI anchors structural remodeled in the ER by PGAP1 and MPPE1. In COPI vesicle-mediated retrograde transport inhibits the GTPase-activating activity of ARFGAP1 towards ARF1 thus preventing immature uncoating and allowing cargo selection to take place. Involved in trafficking of G protein-coupled receptors (GPCRs). Regulates F2RL1, OPRM1 and P2RY4 exocytic trafficking from the Golgi to the plasma membrane thus contributing to receptor resensitization. Facilitates CASR maturation and stabilization in the early secretory pathway and increases CASR plasma membrane targeting. Proposed to be involved in organization of intracellular membranes such as the maintenance of the Golgi apparatus. May also play a role in the biosynthesis of secreted cargo such as eventual processing.

Rattus norvegicus (taxid: 10116)

>sp|Q15363|TMED2_HUMAN Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens GN=TMED2 PE=1 SV=1

 Score =  171 bits (434), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/204 (44%), Positives = 116/204 (56%), Gaps = 66/204 (32%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GL+FE++EGGFLDIDV ITGPD   IY+G+RESSGKYTF+AHM G Y +CFSN+MSTMTP
Sbjct: 44  GLIFEVAEGGFLDIDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTP 103

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           K+VMF +                     +I   PKG                        
Sbjct: 104 KIVMFTI---------------------DIGEAPKG------------------------ 118

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                +D + E  +  L++MI +L  ++T+VKHEQEYM VR+RI
Sbjct: 119 ---------------------QDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERI 157

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HR+IN++TNSRVV WSFFEA+VLV
Sbjct: 158 HRAINDNTNSRVVLWSFFEALVLV 181

Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway but also in post-Golgi membranes. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side. In COPII vesicle-mediated anterograde transport involved in the transport of GPI-anchored proteins and proposed to act togther with TMED10 as their cargo receptor; the function specifically implies SEC24C and SEC24D of the COPII vesicle coat and lipid raft-like microdomains of the ER. Recognizes GPI anchors structural remodeled in the ER by PGAP1 and MPPE1. In COPI vesicle-mediated retrograde transport inhibits the GTPase-activating activity of ARFGAP1 towards ARF1 thus preventing immature uncoating and allowing cargo selection to take place. Involved in trafficking of G protein-coupled receptors (GPCRs). Regulates F2RL1, OPRM1 and P2RY4 exocytic trafficking from the Golgi to the plasma membrane thus contributing to receptor resensitization. Facilitates CASR maturation and stabilization in the early secretory pathway and increases CASR plasma membrane targeting. Proposed to be involved in organization of intracellular membranes such as the maintenance of the Golgi apparatus. May also play a role in the biosynthesis of secreted cargo such as eventual processing.

Homo sapiens (taxid: 9606)

>sp|A7SXK3|TMED_NEMVE Transmembrane emp24 domain-containing protein OS=Nematostella vectensis GN=v1g194562 PE=3 SV=1

 Score =  155 bits (393), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 89/204 (43%), Positives = 110/204 (53%), Gaps = 66/204 (32%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GL+FE++EGGFLDIDV+I GPD  +IY GERE+SGKYTF+AHM G Y YCFSN+MSTMTP
Sbjct: 46  GLIFEVAEGGFLDIDVKIIGPDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTMTP 105

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           KV+ F+M++    P +  K +                N   DKL                
Sbjct: 106 KVLKFSMDI-GEAPKDTSKED----------------NAGHDKLSE-------------- 134

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                          + +Q SE   G K E                    QEYM VR+RI
Sbjct: 135 ---------------MVSQLSEAMTGVKHE--------------------QEYMEVRERI 159

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HRSIN++TNSRVVWWSFFE++VLV
Sbjct: 160 HRSINDNTNSRVVWWSFFESLVLV 183

Could have a role in the budding of coatomer-coated and other species of coated vesicles.

Nematostella vectensis (taxid: 45351)

>sp|O17528|TMED2_CAEEL Suppressor/enhancer of lin-12 protein 9 OS=Caenorhabditis elegans GN=sel-9 PE=1 SV=1

 Score =  125 bits (314), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GLMFE++EGGFLDIDV+ITGPD   IY+GERESSGK+TF+AHM GVYTYCF N+MSTMTP
Sbjct: 42  GLMFEVAEGGFLDIDVKITGPDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTP 101

Query: 141 KVVMFNMEVLSTQPSEDDKG 160
           K VMF +E+  T+P +   G
Sbjct: 102 KAVMFTVEI--TEPHQQAPG 119

May have a role in the negative regulation of lin-12 and glp-1 transport to the cell surface. May also have a role in a quality control mechanism for endoplasmic reticulum-Golgi transport; the budding of coatomer-coated and other species of coated vesicles, could bind cargo molecules to collect them into budding vesicles.

Caenorhabditis elegans (taxid: 6239)

>sp|Q769F9|TMEDA_DICDI Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum GN=empA PE=3 SV=1

 Score = 93.2 bits (230), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 90/202 (44%), Gaps = 66/202 (32%)

Query: 83  MFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKV 142
           MF++ +GGF DID  I  PD  I+Y G+RES G  T  +  +GVY++CFSN+MS++T K 
Sbjct: 50  MFQVIQGGFNDIDFTIISPDKRIVYSGQRESEGTKTLRSSFAGVYSFCFSNKMSSLTDKT 109

Query: 143 VMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLLFC 202
           V F + V  + P  +              AK K L P +        + ++  +D     
Sbjct: 110 VSFILSVGESSPIRE-------------IAKKKDLTPIE--------RSIMTLSD----- 143

Query: 203 PPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHR 262
                 G+I +              K E N   M                    R+  HR
Sbjct: 144 ------GVIAV--------------KNEQNYFKM--------------------REAAHR 163

Query: 263 SINESTNSRVVWWSFFEAVVLV 284
           +  ESTNSRV+WWS FEA VL+
Sbjct: 164 NTAESTNSRVLWWSVFEAFVLI 185

Could have a role in the budding of coatomer-coated and other species of coated vesicles.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9P7I9|EMP24_SCHPO Endosomal protein P24B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=emp24 PE=3 SV=1

 Score = 92.0 bits (227), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 53/68 (77%)

Query: 346 IRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKR 405
           +RQL ++++ VKHEQEY   R+RIHR+  ESTN RV WWS  + V+LV++ + QI+YLKR
Sbjct: 132 VRQLHDTISKVKHEQEYFVARERIHRNTAESTNDRVKWWSILQTVILVSVCVFQIFYLKR 191

Query: 406 FFEVRRVV 413
            FEV+RVV
Sbjct: 192 LFEVKRVV 199

Constituent of COPII-coated endoplasmic reticulum-derived transport vesicles. Required for efficient transport of a subset of secretory proteins to the Golgi.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q54BN0|TMEDB_DICDI Transmembrane emp24 domain-containing protein B OS=Dictyostelium discoideum GN=empB PE=3 SV=1

 Score = 80.9 bits (198), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 70/206 (33%)

Query: 82  LMFEISEGGFLDIDVRITGPDGNIIYQG---ERESSGKYTFSAHMSGVYTYCFSNQMSTM 138
           L++++  GG LDI+V++T P GN I++    + +  GK +F+A  SG Y  CF+N+MS  
Sbjct: 49  LLYQVIRGGLLDINVKLTDPKGNTIFERLHFDTQMKGKQSFTAGESGAYKVCFNNEMSRF 108

Query: 139 TPKVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADF 198
           T KVV F      T  SE++  ++         AK   + P                   
Sbjct: 109 TAKVVTF------TWASEEEGVKE--------VAKGDSITPM------------------ 136

Query: 199 LLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRD 258
                                   D   +K E  LQ +I           HEQ+ +  R+
Sbjct: 137 ------------------------DQSVQKIERVLQSVI-----------HEQKKLRYRE 161

Query: 259 RIHRSINESTNSRVVWWSFFEAVVLV 284
           + +R  +ESTN+RVVWW+  E +VLV
Sbjct: 162 QANRDTSESTNARVVWWTIAEVIVLV 187

Could have a role in the budding of coatomer-coated and other species of coated vesicles.

Dictyostelium discoideum (taxid: 44689)

>sp|P32803|EMP24_YEAST Endosomal protein P24B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP24 PE=1 SV=1

 Score = 76.3 bits (186), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 3/78 (3%)

Query: 339 EPN---LQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTM 395
           +PN   L   +R+L +    VK EQ Y+ +R+R HR+  ESTN RV WWS F+  V++  
Sbjct: 126 DPNTNTLDSAVRKLSKLTREVKDEQSYIVIRERTHRNTAESTNDRVKWWSIFQLGVVIAN 185

Query: 396 TIGQIYYLKRFFEVRRVV 413
           ++ QIYYL+RFFEV  +V
Sbjct: 186 SLFQIYYLRRFFEVTSLV 203

Constituent of COPII-coated endoplasmic reticulum-derived transport vesicles. Required for efficient transport of a subset of secretory proteins to the Golgi.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	413
170591588	206	Suppressor/enhancer of lin-12 protein 9	0.355	0.713	0.478	3e-43
312067333	205	SEL-9 protein [Loa loa] gi|307768146|gb|	0.353	0.712	0.482	4e-43
158297960	205	AGAP004743-PA [Anopheles gambiae str. PE	0.341	0.687	0.490	5e-43
260834239	203	hypothetical protein BRAFLDRAFT_127851 [	0.334	0.679	0.460	3e-42
291235572	203	PREDICTED: coated vesicle membrane prote	0.334	0.679	0.455	8e-42
157117726	206	copii-coated vesicle membrane protein P2	0.341	0.684	0.490	1e-41
170028827	207	suppressor/enhancer of lin-12 protein 9	0.341	0.681	0.480	2e-41
47228487	493	unnamed protein product [Tetraodon nigro	0.334	0.279	0.446	1e-40
391342444	209	PREDICTED: transmembrane emp24 domain-co	0.360	0.712	0.447	1e-40
348535419	201	PREDICTED: transmembrane emp24 domain-co	0.334	0.686	0.446	2e-40

>gi|170591588|ref|XP_001900552.1| Suppressor/enhancer of lin-12 protein 9 precursor [Brugia malayi] gi|158592164|gb|EDP30766.1| Suppressor/enhancer of lin-12 protein 9 precursor, putative [Brugia malayi]

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 98/205 (47%), Positives = 120/205 (58%), Gaps = 58/205 (28%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           G++FE++EGGFLDIDV+I GPD   IY+GERESSGKYTF+AHM G YTYCF NQMSTMTP
Sbjct: 41  GVIFEVAEGGFLDIDVKIIGPDNKEIYRGERESSGKYTFAAHMDGPYTYCFGNQMSTMTP 100

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           KVVMF+ME+   QP +    E G         K  G + + D L                
Sbjct: 101 KVVMFSMEI--AQPGQPIPSEAG---------KGSGNDSSADSL---------------- 133

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                           L++M+R+L  +LTSVKHEQEYM VR+R+
Sbjct: 134 -------------------------------KLEEMVRELSSALTSVKHEQEYMEVRERV 162

Query: 261 HRSINESTNSRVVWWSFFEAVVLVN 285
           HRSINE+TNSRVV W+ FEAVVL +
Sbjct: 163 HRSINENTNSRVVLWAVFEAVVLAS 187

Source: Brugia malayi

Species: Brugia malayi

Genus: Brugia

Family: Onchocercidae

Order: Spirurida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|312067333|ref|XP_003136693.1| SEL-9 protein [Loa loa] gi|307768146|gb|EFO27380.1| suppressor/enhancer-lin-12 protein 9 [Loa loa]

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/205 (48%), Positives = 123/205 (60%), Gaps = 59/205 (28%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           G++FE++EGGFLDIDV+I GPD   IY+GERESSGKYTF+AHM G YTYCF NQMSTMTP
Sbjct: 41  GVIFEVAEGGFLDIDVKIIGPDNKEIYRGERESSGKYTFAAHMDGPYTYCFGNQMSTMTP 100

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           KVVMF+ME+   QP +    E G           +G+N +              +AD L 
Sbjct: 101 KVVMFSMEI--AQPGQMVPSEAG-----------QGVNDS--------------SADSL- 132

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                           L++M+R+L  +LTSVKHEQEYM VR+R+
Sbjct: 133 -------------------------------KLEEMVRELSSALTSVKHEQEYMEVRERV 161

Query: 261 HRSINESTNSRVVWWSFFEAVVLVN 285
           HRSINE+TNSRVV W+ FEAVVL +
Sbjct: 162 HRSINENTNSRVVLWAIFEAVVLAS 186

Source: Loa loa

Species: Loa loa

Genus: Loa

Family: Onchocercidae

Order: Spirurida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|158297960|ref|XP_318076.3| AGAP004743-PA [Anopheles gambiae str. PEST] gi|157014578|gb|EAA13243.3| AGAP004743-PA [Anopheles gambiae str. PEST]

 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 100/204 (49%), Positives = 120/204 (58%), Gaps = 63/204 (30%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GLMFE  EGGFLDI+VRI+GPD  +IYQGE+ESSGKYTFSA+ +G+Y YCFSN+MST+TP
Sbjct: 45  GLMFETVEGGFLDIEVRISGPDQKVIYQGEKESSGKYTFSAYETGIYHYCFSNKMSTLTP 104

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           KVVMF+ME                     I   PKG   A ++  +  TK          
Sbjct: 105 KVVMFSME---------------------IGEAPKGTVGAVNEGEAGHTK---------- 133

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                           L+DMIR+L  +LTS+KHEQ+YM VRDRI
Sbjct: 134 --------------------------------LEDMIRELSGTLTSIKHEQDYMHVRDRI 161

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HRSINESTNSRVV WSFFEA+VL+
Sbjct: 162 HRSINESTNSRVVMWSFFEAIVLI 185

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260834239|ref|XP_002612119.1| hypothetical protein BRAFLDRAFT_127851 [Branchiostoma floridae] gi|229297492|gb|EEN68128.1| hypothetical protein BRAFLDRAFT_127851 [Branchiostoma floridae]

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/204 (46%), Positives = 117/204 (57%), Gaps = 66/204 (32%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GLMFE++EGGFLDIDV+ITGPD  +IY GERES+GKYTF+AHM GVY YCFSN+MSTMTP
Sbjct: 46  GLMFEVAEGGFLDIDVKITGPDSTVIYSGERESNGKYTFAAHMDGVYKYCFSNKMSTMTP 105

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           K+VM                     ++ +I   PKG                        
Sbjct: 106 KIVM---------------------FSMDIGEAPKG------------------------ 120

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                +D + E  +  L++MI +L  +LT VKHEQEYM VR+RI
Sbjct: 121 ---------------------QDMETEAHQNKLEEMINELAVALTGVKHEQEYMEVRERI 159

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HR+IN++TNSRVV WSFFEA+VLV
Sbjct: 160 HRAINDNTNSRVVLWSFFEALVLV 183

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|291235572|ref|XP_002737711.1| PREDICTED: coated vesicle membrane protein-like isoform 2 [Saccoglossus kowalevskii]

 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 93/204 (45%), Positives = 119/204 (58%), Gaps = 66/204 (32%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GL FE++EGGFLDIDV+ITGPDG +IY GERES+GKYTF+AHM GVY YCFSN+MSTMTP
Sbjct: 46  GLTFEVAEGGFLDIDVKITGPDGKVIYSGERESNGKYTFAAHMDGVYKYCFSNKMSTMTP 105

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           K+VMF+M                     ++   PKG +   D+ ++K             
Sbjct: 106 KIVMFSM---------------------DVGDSPKGSDMDTDEHHNK------------- 131

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                           L++M+ +L  +LT VKHEQEYM VR+RI
Sbjct: 132 --------------------------------LEEMVNELATALTGVKHEQEYMEVRERI 159

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HR+IN++TNSRVV WSFFE++VLV
Sbjct: 160 HRAINDNTNSRVVLWSFFESLVLV 183

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|157117726|ref|XP_001658907.1| copii-coated vesicle membrane protein P24 [Aedes aegypti] gi|108884574|gb|EAT48799.1| AAEL000208-PA [Aedes aegypti]

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/204 (49%), Positives = 118/204 (57%), Gaps = 63/204 (30%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GLMFE  EGGFLDI+VRI GPD  +IYQGE+ESSGKYTFSA+ +GVY YCFSN+MST+TP
Sbjct: 46  GLMFETIEGGFLDIEVRIVGPDQKVIYQGEKESSGKYTFSAYETGVYHYCFSNKMSTLTP 105

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           KVVMF+ME                     I   PKG   A ++  +  TK          
Sbjct: 106 KVVMFSME---------------------IGEAPKGTIGAVNEGEAGHTK---------- 134

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                           L+DMI++L  +LTS+KHEQ+YM VRDRI
Sbjct: 135 --------------------------------LEDMIKELSGTLTSIKHEQDYMHVRDRI 162

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HRSINESTNSRVV WS FEA+VLV
Sbjct: 163 HRSINESTNSRVVMWSVFEALVLV 186

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170028827|ref|XP_001842296.1| suppressor/enhancer of lin-12 protein 9 [Culex quinquefasciatus] gi|167877981|gb|EDS41364.1| suppressor/enhancer of lin-12 protein 9 [Culex quinquefasciatus]

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/204 (48%), Positives = 118/204 (57%), Gaps = 63/204 (30%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GLMFE  EGGFLDI+VRITGPD  +IYQGE+ESSGKYTFSA+ +G+Y YCFSN+MST+TP
Sbjct: 47  GLMFETVEGGFLDIEVRITGPDQKVIYQGEKESSGKYTFSAYETGIYHYCFSNKMSTLTP 106

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           KVVMF+ME                     I   PKG   A ++  +  TK          
Sbjct: 107 KVVMFSME---------------------IGEAPKGTIGAVNEGEAGHTKL--------- 136

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                            +DMI++L  +LTS+KHEQ+YM VRDRI
Sbjct: 137 ---------------------------------EDMIKELSGTLTSIKHEQDYMHVRDRI 163

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HRSINE+TNSRVV WS FEA+VLV
Sbjct: 164 HRSINENTNSRVVMWSVFEALVLV 187

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|47228487|emb|CAG05307.1| unnamed protein product [Tetraodon nigroviridis]

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/204 (44%), Positives = 116/204 (56%), Gaps = 66/204 (32%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GLMFE++EGGFLDIDV ITGPDG  IY+G+RESSGKY+ +AHM G Y +CFSN+MSTMTP
Sbjct: 44  GLMFEVAEGGFLDIDVEITGPDGKQIYKGDRESSGKYSVAAHMDGTYKFCFSNKMSTMTP 103

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           K+VMF +                     +I   PKG                        
Sbjct: 104 KIVMFTI---------------------DIGEAPKG------------------------ 118

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                +D + E  +  L++MI +L  ++T+VKHEQEYM VR+RI
Sbjct: 119 ---------------------QDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERI 157

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HR+IN++TNSRVV WSFFEA+VLV
Sbjct: 158 HRAINDNTNSRVVLWSFFEALVLV 181

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|391342444|ref|XP_003745530.1| PREDICTED: transmembrane emp24 domain-containing protein-like isoform 1 [Metaseiulus occidentalis]

 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 118/208 (56%), Gaps = 59/208 (28%)

Query: 77  KGEK-GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQM 135
           KG K GL FE+ EGGFLDIDV+ITGPDG ++Y GERESS KYTF+A+  G+Y YCFSN M
Sbjct: 39  KGTKMGLTFEVVEGGFLDIDVKITGPDGKVVYNGERESSNKYTFAAYAEGMYAYCFSNAM 98

Query: 136 STMTPKVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRT 195
           STMTPK VMF+M++   +P  ++ G+                 PA D +           
Sbjct: 99  STMTPKTVMFSMDI-GEEPKNEETGK-----------------PAADAV----------- 129

Query: 196 ADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMS 255
                                         G  G+  L+DMI +L  ++T VKHEQEYM 
Sbjct: 130 -----------------------------TGAAGDTKLEDMINELHTAMTGVKHEQEYMM 160

Query: 256 VRDRIHRSINESTNSRVVWWSFFEAVVL 283
           +RDRIHRSI+ESTNSRVV W+ FE +V+
Sbjct: 161 IRDRIHRSISESTNSRVVIWAIFENLVI 188

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348535419|ref|XP_003455198.1| PREDICTED: transmembrane emp24 domain-containing protein 2-like [Oreochromis niloticus]

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/204 (44%), Positives = 116/204 (56%), Gaps = 66/204 (32%)

Query: 81  GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTP 140
           GLMFE++EGGFLDIDV ITGPDG  IY+G+RESSGKY+ +AHM G Y +CFSN+MSTMTP
Sbjct: 44  GLMFEVAEGGFLDIDVEITGPDGKQIYKGDRESSGKYSVAAHMDGTYKFCFSNKMSTMTP 103

Query: 141 KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLL 200
           K+VMF +                     +I   PKG                        
Sbjct: 104 KIVMFTI---------------------DIGEAPKG------------------------ 118

Query: 201 FCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRI 260
                                +D + E  +  L++MI +L  ++T+VKHEQEYM VR+RI
Sbjct: 119 ---------------------QDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERI 157

Query: 261 HRSINESTNSRVVWWSFFEAVVLV 284
           HR+IN++TNSRVV WSFFEA+VLV
Sbjct: 158 HRAINDNTNSRVVLWSFFEALVLV 181

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	413
WB|WBGene00004766	203	sel-9 [Caenorhabditis elegans	0.225	0.458	0.639	5.4e-55
UNIPROTKB|O17528	203	sel-9 "Suppressor/enhancer of	0.225	0.458	0.639	5.4e-55
ZFIN|ZDB-GENE-030131-269	208	tmed2 "transmembrane emp24 dom	0.174	0.346	0.75	2.3e-54
UNIPROTKB|Q5ZKB0	201	TMED2 "Uncharacterized protein	0.174	0.358	0.75	3.7e-54
UNIPROTKB|C3V9V7	201	TMED2 "RNP24" [Bos taurus (tax	0.174	0.358	0.75	3.7e-54
UNIPROTKB|E2RGZ5	201	TMED2 "Uncharacterized protein	0.174	0.358	0.75	3.7e-54
UNIPROTKB|Q15363	201	TMED2 "Transmembrane emp24 dom	0.174	0.358	0.75	3.7e-54
UNIPROTKB|F2Z501	201	TMED2 "Uncharacterized protein	0.174	0.358	0.75	3.7e-54
UNIPROTKB|P49020	196	TMED2 "Transmembrane emp24 dom	0.174	0.367	0.75	3.7e-54
RGD|69243	201	Tmed2 "transmembrane emp24 dom	0.174	0.358	0.75	3.7e-54

WB|WBGene00004766 sel-9 [Caenorhabditis elegans (taxid:6239)]

 Score = 314 (115.6 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
 Identities = 62/97 (63%), Positives = 76/97 (78%)

Query:    78 GEK-GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMS 136
             G K GLMFE++EGGFLDIDV+ITGPD   IY+GERESSGK+TF+AHM GVYTYCF N+MS
Sbjct:    38 GTKMGLMFEVAEGGFLDIDVKITGPDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMS 97

Query:   137 TMTPKVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAK 173
             TMTPK VMF +E+  T+P +   G   N+ A + +AK
Sbjct:    98 TMTPKAVMFTVEI--TEPHQQAPGAAANQDAAD-NAK 131

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0008593 "regulation of Notch signaling pathway" evidence=IGI

UNIPROTKB|O17528 sel-9 "Suppressor/enhancer of lin-12 protein 9" [Caenorhabditis elegans (taxid:6239)]

 Score = 314 (115.6 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
 Identities = 62/97 (63%), Positives = 76/97 (78%)

Query:    78 GEK-GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMS 136
             G K GLMFE++EGGFLDIDV+ITGPD   IY+GERESSGK+TF+AHM GVYTYCF N+MS
Sbjct:    38 GTKMGLMFEVAEGGFLDIDVKITGPDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMS 97

Query:   137 TMTPKVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAK 173
             TMTPK VMF +E+  T+P +   G   N+ A + +AK
Sbjct:    98 TMTPKAVMFTVEI--TEPHQQAPGAAANQDAAD-NAK 131

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=NAS

GO:0005215 "transporter activity" evidence=IMP

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP

ZFIN|ZDB-GENE-030131-269 tmed2 "transmembrane emp24 domain trafficking protein 2" [Danio rerio (taxid:7955)]

 Score = 290 (107.1 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
 Identities = 54/72 (75%), Positives = 66/72 (91%)

Query:   342 LQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIY 401
             L++MI +L  ++T+VKHEQEYM VR+RIHR+IN++TNSRVV WSFFEA+VLV MT+GQIY
Sbjct:   137 LEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIY 196

Query:   402 YLKRFFEVRRVV 413
             YLKRFFEVRRVV
Sbjct:   197 YLKRFFEVRRVV 208

GO:0016021 "integral to membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|Q5ZKB0 TMED2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 290 (107.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
 Identities = 54/72 (75%), Positives = 66/72 (91%)

Query:   342 LQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIY 401
             L++MI +L  ++T+VKHEQEYM VR+RIHR+IN++TNSRVV WSFFEA+VLV MT+GQIY
Sbjct:   130 LEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIY 189

Query:   402 YLKRFFEVRRVV 413
             YLKRFFEVRRVV
Sbjct:   190 YLKRFFEVRRVV 201

GO:0016021 "integral to membrane" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0001892 "embryonic placenta development" evidence=IEA

GO:0001893 "maternal placenta development" evidence=IEA

GO:0001947 "heart looping" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0007030 "Golgi organization" evidence=IEA

GO:0010628 "positive regulation of gene expression" evidence=IEA

GO:0032525 "somite rostral/caudal axis specification" evidence=IEA

GO:0034260 "negative regulation of GTPase activity" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0036342 "post-anal tail morphogenesis" evidence=IEA

GO:0072661 "protein targeting to plasma membrane" evidence=IEA

UNIPROTKB|C3V9V7 TMED2 "RNP24" [Bos taurus (taxid:9913)]

 Score = 290 (107.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
 Identities = 54/72 (75%), Positives = 66/72 (91%)

Query:   342 LQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIY 401
             L++MI +L  ++T+VKHEQEYM VR+RIHR+IN++TNSRVV WSFFEA+VLV MT+GQIY
Sbjct:   130 LEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIY 189

Query:   402 YLKRFFEVRRVV 413
             YLKRFFEVRRVV
Sbjct:   190 YLKRFFEVRRVV 201

GO:0016021 "integral to membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|E2RGZ5 TMED2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 290 (107.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
 Identities = 54/72 (75%), Positives = 66/72 (91%)

Query:   342 LQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIY 401
             L++MI +L  ++T+VKHEQEYM VR+RIHR+IN++TNSRVV WSFFEA+VLV MT+GQIY
Sbjct:   130 LEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIY 189

Query:   402 YLKRFFEVRRVV 413
             YLKRFFEVRRVV
Sbjct:   190 YLKRFFEVRRVV 201

GO:0072661 "protein targeting to plasma membrane" evidence=IEA

GO:0034260 "negative regulation of GTPase activity" evidence=IEA

GO:0007030 "Golgi organization" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q15363 TMED2 "Transmembrane emp24 domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 290 (107.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
 Identities = 54/72 (75%), Positives = 66/72 (91%)

Query:   342 LQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIY 401
             L++MI +L  ++T+VKHEQEYM VR+RIHR+IN++TNSRVV WSFFEA+VLV MT+GQIY
Sbjct:   130 LEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIY 189

Query:   402 YLKRFFEVRRVV 413
             YLKRFFEVRRVV
Sbjct:   190 YLKRFFEVRRVV 201

GO:0001843 "neural tube closure" evidence=IEA

GO:0001892 "embryonic placenta development" evidence=IEA

GO:0001893 "maternal placenta development" evidence=IEA

GO:0001947 "heart looping" evidence=IEA

GO:0010628 "positive regulation of gene expression" evidence=IEA

GO:0032525 "somite rostral/caudal axis specification" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0036342 "post-anal tail morphogenesis" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0030663 "COPI-coated vesicle membrane" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0034260 "negative regulation of GTPase activity" evidence=IDA

GO:0048205 "COPI coating of Golgi vesicle" evidence=TAS

GO:0007030 "Golgi organization" evidence=IMP

GO:0072661 "protein targeting to plasma membrane" evidence=IDA

GO:0030137 "COPI-coated vesicle" evidence=ISS

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=TAS

GO:0006886 "intracellular protein transport" evidence=IDA

GO:0035459 "cargo loading into vesicle" evidence=TAS

GO:0048208 "COPII vesicle coating" evidence=TAS

GO:0016021 "integral to membrane" evidence=ISS

GO:0042589 "zymogen granule membrane" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|F2Z501 TMED2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 290 (107.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
 Identities = 54/72 (75%), Positives = 66/72 (91%)

Query:   342 LQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIY 401
             L++MI +L  ++T+VKHEQEYM VR+RIHR+IN++TNSRVV WSFFEA+VLV MT+GQIY
Sbjct:   130 LEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIY 189

Query:   402 YLKRFFEVRRVV 413
             YLKRFFEVRRVV
Sbjct:   190 YLKRFFEVRRVV 201

GO:0072661 "protein targeting to plasma membrane" evidence=IEA

GO:0036342 "post-anal tail morphogenesis" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0034260 "negative regulation of GTPase activity" evidence=IEA

GO:0032525 "somite rostral/caudal axis specification" evidence=IEA

GO:0010628 "positive regulation of gene expression" evidence=IEA

GO:0007030 "Golgi organization" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0001947 "heart looping" evidence=IEA

GO:0001893 "maternal placenta development" evidence=IEA

GO:0001892 "embryonic placenta development" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P49020 TMED2 "Transmembrane emp24 domain-containing protein 2" [Cricetulus griseus (taxid:10029)]

 Score = 290 (107.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
 Identities = 54/72 (75%), Positives = 66/72 (91%)

Query:   342 LQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIY 401
             L++MI +L  ++T+VKHEQEYM VR+RIHR+IN++TNSRVV WSFFEA+VLV MT+GQIY
Sbjct:   125 LEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIY 184

Query:   402 YLKRFFEVRRVV 413
             YLKRFFEVRRVV
Sbjct:   185 YLKRFFEVRRVV 196

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0007030 "Golgi organization" evidence=ISS

GO:0030137 "COPI-coated vesicle" evidence=IDA

GO:0034260 "negative regulation of GTPase activity" evidence=ISS

GO:0072661 "protein targeting to plasma membrane" evidence=ISS

RGD|69243 Tmed2 "transmembrane emp24 domain trafficking protein 2" [Rattus norvegicus (taxid:10116)]

 Score = 290 (107.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
 Identities = 54/72 (75%), Positives = 66/72 (91%)

Query:   342 LQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIY 401
             L++MI +L  ++T+VKHEQEYM VR+RIHR+IN++TNSRVV WSFFEA+VLV MT+GQIY
Sbjct:   130 LEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIY 189

Query:   402 YLKRFFEVRRVV 413
             YLKRFFEVRRVV
Sbjct:   190 YLKRFFEVRRVV 201

GO:0001701 "in utero embryonic development" evidence=ISO

GO:0001756 "somitogenesis" evidence=ISO

GO:0001843 "neural tube closure" evidence=IEA;ISO

GO:0001892 "embryonic placenta development" evidence=IEA;ISO

GO:0001893 "maternal placenta development" evidence=IEA

GO:0001947 "heart looping" evidence=IEA;ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=ISO;ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISO;ISS

GO:0005794 "Golgi apparatus" evidence=ISO;ISS

GO:0006810 "transport" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=ISO;NAS

GO:0006903 "vesicle targeting" evidence=NAS

GO:0007030 "Golgi organization" evidence=ISO;ISS

GO:0010628 "positive regulation of gene expression" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA;IDA

GO:0030137 "COPI-coated vesicle" evidence=ISS;IDA

GO:0030663 "COPI-coated vesicle membrane" evidence=IEA

GO:0032525 "somite rostral/caudal axis specification" evidence=IEA;ISO

GO:0032580 "Golgi cisterna membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0034260 "negative regulation of GTPase activity" evidence=ISO;ISS

GO:0035264 "multicellular organism growth" evidence=IEA;ISO

GO:0036342 "post-anal tail morphogenesis" evidence=IEA;ISO

GO:0042589 "zymogen granule membrane" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0072661 "protein targeting to plasma membrane" evidence=ISO;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	413
pfam01105	178	pfam01105, EMP24_GP25L, emp24/gp25L/p24 family/GOL	1e-23
pfam01105	178	pfam01105, EMP24_GP25L, emp24/gp25L/p24 family/GOL	6e-18
pfam01105	178	pfam01105, EMP24_GP25L, emp24/gp25L/p24 family/GOL	6e-18
pfam01105	178	pfam01105, EMP24_GP25L, emp24/gp25L/p24 family/GOL	7e-15

>gnl|CDD|216301 pfam01105, EMP24_GP25L, emp24/gp25L/p24 family/GOLD

 Score = 96.9 bits (242), Expect = 1e-23
 Identities = 33/68 (48%), Positives = 50/68 (73%)

Query: 341 NLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQI 400
            L++ +++L + L  +K EQ+Y+  R+  HR  NESTNSRVVWWS  + +VL+ +++ Q+
Sbjct: 111 PLEEELKKLEDQLNDIKREQKYLREREARHRETNESTNSRVVWWSIIQILVLIGVSVLQV 170

Query: 401 YYLKRFFE 408
           YYLKRFFE
Sbjct: 171 YYLKRFFE 178

Members of this family are implicated in bringing cargo forward from the ER and binding to coat proteins by their cytoplasmic domains. This domain corresponds closely to the beta-strand rich GOLD domain described in. The GOLD domain is always found combined with lipid- or membrane-association domains. Length = 178

>gnl|CDD|216301 pfam01105, EMP24_GP25L, emp24/gp25L/p24 family/GOLD

 Score = 80.8 bits (200), Expect = 6e-18
 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 3/83 (3%)

Query: 82  LMFEISEGGFLDIDVRITGPDGN---IIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTM 138
             +++  GG LDID  IT PDGN   I  + +R+S GK++F+A  SG Y +CFSN  ST 
Sbjct: 26  GSYQVISGGNLDIDFTITDPDGNGNVIYSKEDRKSGGKFSFTATESGEYKFCFSNSFSTF 85

Query: 139 TPKVVMFNMEVLSTQPSEDDKGE 161
           + K V F+++V         K +
Sbjct: 86  SSKTVSFDIKVGEEAKDIAKKEK 108

Members of this family are implicated in bringing cargo forward from the ER and binding to coat proteins by their cytoplasmic domains. This domain corresponds closely to the beta-strand rich GOLD domain described in. The GOLD domain is always found combined with lipid- or membrane-association domains. Length = 178

>gnl|CDD|216301 pfam01105, EMP24_GP25L, emp24/gp25L/p24 family/GOLD

 Score = 80.8 bits (200), Expect = 6e-18
 Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)

Query: 1   MFEISEGGFLDIDVRITGPDGN---IIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMT 57
            +++  GG LDID  IT PDGN   I  + +R+S GK++F+A  SG Y +CFSN  ST +
Sbjct: 27  SYQVISGGNLDIDFTITDPDGNGNVIYSKEDRKSGGKFSFTATESGEYKFCFSNSFSTFS 86

Query: 58  PKVVMFNMEVLSTQPSEDDKGE 79
            K V F+++V         K +
Sbjct: 87  SKTVSFDIKVGEEAKDIAKKEK 108

Members of this family are implicated in bringing cargo forward from the ER and binding to coat proteins by their cytoplasmic domains. This domain corresponds closely to the beta-strand rich GOLD domain described in. The GOLD domain is always found combined with lipid- or membrane-association domains. Length = 178

>gnl|CDD|216301 pfam01105, EMP24_GP25L, emp24/gp25L/p24 family/GOLD

 Score = 71.9 bits (177), Expect = 7e-15
 Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)

Query: 222 EDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAV 281
           +  K EK +P L++ +++L + L  +K EQ+Y+  R+  HR  NESTNSRVVWWS  + +
Sbjct: 102 DIAKKEKLDP-LEEELKKLEDQLNDIKREQKYLREREARHRETNESTNSRVVWWSIIQIL 160

Query: 282 VLV 284
           VL+
Sbjct: 161 VLI 163

Members of this family are implicated in bringing cargo forward from the ER and binding to coat proteins by their cytoplasmic domains. This domain corresponds closely to the beta-strand rich GOLD domain described in. The GOLD domain is always found combined with lipid- or membrane-association domains. Length = 178

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	413
KOG1692|consensus	201		100.0
KOG1690|consensus	215		100.0
KOG1693|consensus	209		100.0
KOG3287|consensus	236		100.0
KOG1692|consensus	201		99.97
KOG1691|consensus	210		99.97
KOG1693|consensus	209		99.96
PF01105	183	EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro	99.93
KOG1691|consensus	210		99.84
KOG1690|consensus	215		99.8
PF01105	183	EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro	99.39
KOG3287|consensus	236		99.35
PHA02148	110	hypothetical protein	89.17
PF13897	136	GOLD_2: Golgi-dynamics membrane-trafficking	86.86
PRK14081	667	triple tyrosine motif-containing protein; Provisio	84.17
smart00557	93	IG_FLMN Filamin-type immunoglobulin domains. These	81.98
PRK14081	667	triple tyrosine motif-containing protein; Provisio	80.93

>KOG1692|consensus

Probab=100.00  E-value=7.3e-40  Score=296.54  Aligned_cols=181  Identities=56%  Similarity=0.941  Sum_probs=158.7

Q ss_pred             eEEEeeecccEEEEeecccCCCcceEEEEEEEEeecCCCCCCCCcceEEEEeeecCceeEEEEEECCCCCeEeeceeecc
Q psy13839         35 YTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEGGFLDIDVRITGPDGNIIYQGERESS  114 (413)
Q Consensus        35 ~~f~~~~~G~y~~CF~N~~s~~t~k~V~f~v~v~~~~~~~~~~~~~~~~yqV~~Gg~~dI~v~v~dP~g~~l~~~~~~~~  114 (413)
                      |.++.+.++  +.||++....                     +++++++|+|.+||.++||+.|++|+|++|+..++.+.
T Consensus        21 ~~is~~ah~--eeCf~e~~~~---------------------gd~~~vsF~v~~gg~~~vd~~I~gP~~~~i~~~~~~ss   77 (201)
T KOG1692|consen   21 YGISLDAHE--EECFFENLEE---------------------GDKLSVSFEVIDGGFLGVDVEITGPDGKIIHKGKRESS   77 (201)
T ss_pred             eeEEEccch--hhhHhhhhcc---------------------CCEEEEEEEEecCCccceeEEEECCCCchhhhcccccC
Confidence            334444444  5699998743                     56789999999999999999999999999999999999


Q ss_pred             ceEEEEeecceeEEEEEeeCCCCCCceEEEEEEEEcccCCCCCccccccccccccccCCCCCCCCccccccCCCccchhc
Q psy13839        115 GKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIR  194 (413)
Q Consensus       115 g~f~fta~~~G~y~~Cf~N~~s~~~~k~V~f~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~  194 (413)
                      |+|+|+|+.+|.|++||+|.+|+++||.|+|+++++.....++                                     
T Consensus        78 gk~tF~a~~~G~Y~fCF~N~~s~mtpk~V~F~ihvg~~~~~~d-------------------------------------  120 (201)
T KOG1692|consen   78 GKYTFTAPKKGTYTFCFSNKMSTMTPKTVMFTIHVGHAPQRDD-------------------------------------  120 (201)
T ss_pred             ceEEEEecCCceEEEEecCCCCCCCceEEEEEEEEeeccccch-------------------------------------
Confidence            9999999999999999999999999999999999997521100                                     


Q ss_pred             ccccccCCCCCCcchhhhhhhccCCCCCCCcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhh
Q psy13839        195 TADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVW  274 (413)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~l~~L~~~l~~I~~eQ~y~r~RE~~~r~~~Estn~rV~~  274 (413)
                                                .++|                                                  
T Consensus       121 --------------------------~~~d--------------------------------------------------  124 (201)
T KOG1692|consen  121 --------------------------LAKD--------------------------------------------------  124 (201)
T ss_pred             --------------------------hccc--------------------------------------------------
Confidence                                      0001                                                  


Q ss_pred             hhHHhhhheeeccccccCCCCccceeHHHHHHHhhhhcccCCCCCCCCccchhhhhhhhcccCCchhHHHHHHHHHHHHH
Q psy13839        275 WSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAKDKLHSKPTNSSSIKHLEKIVFFFFSGEPNLQDMIRQLGESLT  354 (413)
Q Consensus       275 wSi~qivvli~~~~~~~~~~~~~~~qi~~lk~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~v~~L~~~l~  354 (413)
                                                              +                      +.++|+++|++|++.|.
T Consensus       125 ----------------------------------------~----------------------~~~~L~~~I~eL~~al~  142 (201)
T KOG1692|consen  125 ----------------------------------------A----------------------HQNKLEEMIRELSEALT  142 (201)
T ss_pred             ----------------------------------------c----------------------cccHHHHHHHHHHHHHH
Confidence                                                    0                      15689999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Q psy13839        355 SVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVRRVV  413 (413)
Q Consensus       355 ~I~~eq~y~r~RE~~~r~t~Estn~RV~~wSi~q~~vLi~vs~~Qv~~Lk~fF~~Kkiv  413 (413)
                      +++.||+|+..||++||.++|+||+||+|||++|.++||++|++|||||||||++|++|
T Consensus       143 ~Vk~EQeY~~~Rer~Hr~~nEntn~RVv~wsife~~vLi~~s~~QVyYLkRfFEvkrvv  201 (201)
T KOG1692|consen  143 SVKHEQEYMEARERIHRNTNENTNSRVVLWSIFEALVLIAMSVLQVYYLKRFFEVKRVV  201 (201)
T ss_pred             HhHHHHHHHHHHHHHHHHhhhcccceeehHHHHHHHHHHHHHHHHHHHHHHhheeeecC
Confidence            99999999999999999999999999999999999999999999999999999999975

>KOG1690|consensus

Probab=100.00  E-value=2.9e-37  Score=280.60  Aligned_cols=188  Identities=24%  Similarity=0.388  Sum_probs=157.6

Q ss_pred             EEeeecccEEEEeecccCCCcceEEEEEEEEeecCCCCCCCCcceEEEEeeecCceeEEEEEECC--CCCeEeeceeecc
Q psy13839         37 FSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEGGFLDIDVRITGP--DGNIIYQGERESS  114 (413)
Q Consensus        37 f~~~~~G~y~~CF~N~~s~~t~k~V~f~v~v~~~~~~~~~~~~~~~~yqV~~Gg~~dI~v~v~dP--~g~~l~~~~~~~~  114 (413)
                      +-....|+.++||.+++|+++.+++.|.+.+++++.+.         |+  +-.+..|.|.|.+|  ++|+|+++...++
T Consensus        21 ~yFy~~~~e~KCF~eelpk~tmv~G~yk~qlyd~~~~~---------y~--~~p~~gm~VeV~e~fdnnh~Vl~q~~ss~   89 (215)
T KOG1690|consen   21 LYFYIAGTEKKCFIEELPKGTMVTGNYKAQLYDDQLKG---------YG--SYPNIGMHVEVKETFDNNHVVLSQQYSSE   89 (215)
T ss_pred             EEEEecCCcccchhhhCCCCcEEEeeeeeeeecchhcc---------cc--cCCCceEEEEeecCCCCceEEEeecCCCC
Confidence            44567788899999999999999999999999886532         55  22344555555555  5569999999999


Q ss_pred             ceEEEEeecceeEEEEEeeCCCCCC--ce-EEEEEEEEcccCCCCCccccccccccccccCCCCCCCCccccccCCCccc
Q psy13839        115 GKYTFSAHMSGVYTYCFSNQMSTMT--PK-VVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKF  191 (413)
Q Consensus       115 g~f~fta~~~G~y~~Cf~N~~s~~~--~k-~V~f~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~  191 (413)
                      |+|+|||+++|+|+||+.+..+.|-  .| .|.+++++|+.          ++.|++                       
T Consensus        90 G~ftFta~~~GeH~IC~~s~s~awf~~aklRvhld~qvG~~----------a~l~a~-----------------------  136 (215)
T KOG1690|consen   90 GDFTFTALTPGEHRICIQSNSTAWFNGAKLRVHLDIQVGDH----------ANLDAQ-----------------------  136 (215)
T ss_pred             CceEEEccCCCceEEEEecccchhhccceEEEEEEEeeCch----------hhhhhh-----------------------
Confidence            9999999999999999988877662  33 79999999975          222221                       


Q ss_pred             hhcccccccCCCCCCcchhhhhhhccCCCCCCCcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy13839        192 VIRTADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSR  271 (413)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~l~~L~~~l~~I~~eQ~y~r~RE~~~r~~~Estn~r  271 (413)
                                                        .+++.+.++.++++|..++.+|++||+|+|.||+++|+++||+|+|
T Consensus       137 ----------------------------------~ke~~k~l~~Rv~~L~~~~~~IrkEQ~~~R~RE~~FR~tSES~NsR  182 (215)
T KOG1690|consen  137 ----------------------------------IKETDKLLEGRVRQLNSRLESIRKEQNLQREREETFRDTSESANSR  182 (215)
T ss_pred             ----------------------------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcce
Confidence                                              1223456888999999999999999999999999999999999999


Q ss_pred             hhhhhHHhhhheeeccccccCCCCccceeHHHHHHHhhhhc
Q psy13839        272 VVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAK  312 (413)
Q Consensus       272 V~~wSi~qivvli~~~~~~~~~~~~~~~qi~~lk~~f~~~~  312 (413)
                      |+|||++|++||++          +|+||+.|||+||.+.|
T Consensus       183 vm~Wsv~Q~vvL~~----------tc~wQmrhL~~FFvkqK  213 (215)
T KOG1690|consen  183 VMWWSVAQLVVLLV----------TCIWQMRHLKSFFVKQK  213 (215)
T ss_pred             eeehhHHHHHHHHH----------HHHHHHHHHHHHHHHhh
Confidence            99999999999999          99999999999999887

>KOG1693|consensus

Probab=100.00  E-value=3.5e-35  Score=267.48  Aligned_cols=182  Identities=31%  Similarity=0.627  Sum_probs=158.4

Q ss_pred             EEeeecccEEEEeecccCCCcceEEEEEEEEeecCCCCCCCCcceEEEEeeecCceeEEEEEECCCCCeEeeceeeccce
Q psy13839         37 FSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGK  116 (413)
Q Consensus        37 f~~~~~G~y~~CF~N~~s~~t~k~V~f~v~v~~~~~~~~~~~~~~~~yqV~~Gg~~dI~v~v~dP~g~~l~~~~~~~~g~  116 (413)
                      ++...+...+-||+.++++.                    .+.++++|||+.||++|||++|++|+|++|+.+.++..+.
T Consensus        24 lTfeLp~~aKqC~Y~d~~~~--------------------~~~~~~~fqV~tGG~fDVD~~I~aPdgkvI~~~~kk~~~~   83 (209)
T KOG1693|consen   24 LTFELPDNAKQCFYEDLKKD--------------------DDTTSFEFQVQTGGHFDVDYDIEAPDGKVIYSEKKKRYDS   83 (209)
T ss_pred             EEEEcCCcchhheeeecccC--------------------CceEEEEEEEEeCCceeeEEEEECCCCCEEeecccccccc
Confidence            45555555678999998763                    2347889999999999999999999999999999999999


Q ss_pred             EEEEeecceeEEEEEeeCCCCCCceEEEEEEEEcccCCCCCccccccccccccccCCCCCCCCccccccCCCccchhccc
Q psy13839        117 YTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTA  196 (413)
Q Consensus       117 f~fta~~~G~y~~Cf~N~~s~~~~k~V~f~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~  196 (413)
                      |.|++...|+|++||+|.+|++.+|.|+++++++.+.|.....                                     
T Consensus        84 ~~f~ae~~G~Y~fCFsN~fstf~~Kiv~~~~q~~~~~~~~~~~-------------------------------------  126 (209)
T KOG1693|consen   84 FLFKAEGKGEYTFCFSNEFSTFSHKIVYMDFQVGEEPPLHPAV-------------------------------------  126 (209)
T ss_pred             EEEEEecceEEEEEecCccccccceEeeehhhhccccccCccc-------------------------------------
Confidence            9999999999999999999999999999999998763321000                                     


Q ss_pred             ccccCCCCCCcchhhhhhhccCCCCCCCcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhh
Q psy13839        197 DFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWS  276 (413)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~l~~L~~~l~~I~~eQ~y~r~RE~~~r~~~Estn~rV~~wS  276 (413)
                                              .+.+       .                                            
T Consensus       127 ------------------------~~~~-------~--------------------------------------------  131 (209)
T KOG1693|consen  127 ------------------------SNRD-------T--------------------------------------------  131 (209)
T ss_pred             ------------------------cccc-------h--------------------------------------------
Confidence                                    0000       0                                            


Q ss_pred             HHhhhheeeccccccCCCCccceeHHHHHHHhhhhcccCCCCCCCCccchhhhhhhhcccCCchhHHHHHHHHHHHHHHH
Q psy13839        277 FFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAKDKLHSKPTNSSSIKHLEKIVFFFFSGEPNLQDMIRQLGESLTSV  356 (413)
Q Consensus       277 i~qivvli~~~~~~~~~~~~~~~qi~~lk~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~v~~L~~~l~~I  356 (413)
                                                                                   .++.+|..+..+.++|+.|
T Consensus       132 -------------------------------------------------------------~~~~mena~~~I~~~L~~I  150 (209)
T KOG1693|consen  132 -------------------------------------------------------------ALTQMENAIVEIHRALNKI  150 (209)
T ss_pred             -------------------------------------------------------------HHHHHHHHHHHHHHHHHHH
Confidence                                                                         0567899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy13839        357 KHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVRR  411 (413)
Q Consensus       357 ~~eq~y~r~RE~~~r~t~Estn~RV~~wSi~q~~vLi~vs~~Qv~~Lk~fF~~Kk  411 (413)
                      .+.|.|+|.||+|.|.++||||+||+|||++++++++++++.||+.||.||..||
T Consensus       151 ~~~q~y~R~RE~rn~~tv~st~~Rv~~~Sl~e~~~vv~iSi~Qv~ilk~fFt~~r  205 (209)
T KOG1693|consen  151 DDTQTYYRLREARNRSTVESTNSRVTWWSLLEIIAVVVISIAQVFILKFFFTDRR  205 (209)
T ss_pred             HHHHHHHHHHHhcCccchhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            9999999999999999999999999999999999999999999999999998876

>KOG3287|consensus

Probab=100.00  E-value=1e-32  Score=254.04  Aligned_cols=202  Identities=22%  Similarity=0.413  Sum_probs=171.5

Q ss_pred             ecceeEEEeeecccEEEEeecccCCCcceEEEEEEEEeecCCCCCCCCcceEEEEeeec-CceeEEEEEECCCCCeEeec
Q psy13839         31 SSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEG-GFLDIDVRITGPDGNIIYQG  109 (413)
Q Consensus        31 ~~g~~~f~~~~~G~y~~CF~N~~s~~t~k~V~f~v~v~~~~~~~~~~~~~~~~yqV~~G-g~~dI~v~v~dP~g~~l~~~  109 (413)
                      +..++.|++..+.+.+-||+...+.                     +.+++++|||+.| |+++|++++.+|.|.+|...
T Consensus        30 pa~d~dftv~ipAGk~eCf~Q~v~~---------------------~~tle~eyQVi~G~GDl~i~Ftl~~P~G~~lv~~   88 (236)
T KOG3287|consen   30 PADDYDFTVMIPAGKTECFYQPVPQ---------------------GATLEVEYQVIDGAGDLDIDFTLLNPAGEVLVSD   88 (236)
T ss_pred             cccccceEEEecCCCceeeeeeccC---------------------CeEEEEEEEEEecCCccceeeEEeCCCccEEeec
Confidence            4557778888888889999999754                     3457788999999 88999999999999999999


Q ss_pred             eeeccceEEEEeecceeEEEEEeeCCCCCCceEEEEEEEEcccCCC--CCccccccccccccccCCCCCCCCccccccCC
Q psy13839        110 ERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPS--EDDKGEKGNRYAKNISAKPKGLNPAKDKLYSK  187 (413)
Q Consensus       110 ~~~~~g~f~fta~~~G~y~~Cf~N~~s~~~~k~V~f~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~  187 (413)
                      .++..|.+++.+.+.|+|++||+|++|+++.|.|+|++.+...+..  .++.|.+   |+                    
T Consensus        89 q~k~dg~ht~e~~e~GdY~~CfDNsFS~fs~K~Vffeli~~~~g~~~e~~e~w~k---~~--------------------  145 (236)
T KOG3287|consen   89 QRKVDGVHTVEVTETGDYQVCFDNSFSTFSRKLVFFELILDAHGEFYEGDETWHK---YK--------------------  145 (236)
T ss_pred             ccccCceeEeeccCCcceEEEEcCccccccceEEEEEEEeccccchhccchhHhh---hh--------------------
Confidence            9999999999999999999999999999999999999988765322  1111110   00                    


Q ss_pred             CccchhcccccccCCCCCCcchhhhhhhccCCCCCCCcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13839        188 PTKFVIRTADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINES  267 (413)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~l~~L~~~l~~I~~eQ~y~r~RE~~~r~~~Es  267 (413)
                                                       .+++....+++++++.+.++..+|+++++.|...|.||+|+|++.||
T Consensus       146 ---------------------------------e~~~~Ld~kl~di~~~i~~i~~nl~k~~~~q~~lRa~EaRDr~L~es  192 (236)
T KOG3287|consen  146 ---------------------------------ERTEQLDVKLDDIEDSIGTIKNNLNKMWQYQALLRAREARDRNLQES  192 (236)
T ss_pred             ---------------------------------hhhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc
Confidence                                             01113456889999999999999999999999999999999999999


Q ss_pred             hccchhhhhHHhhhheeeccccccCCCCccceeHHHHHHHhhhhcccCCCCC
Q psy13839        268 TNSRVVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAKDKLHSKP  319 (413)
Q Consensus       268 tn~rV~~wSi~qivvli~~~~~~~~~~~~~~~qi~~lk~~f~~~~~~~~~~~  319 (413)
                      +-.||.|||.+|++|||+          ++.+|+++||+||+.+-...+.+|
T Consensus       193 Nf~rVN~WS~vq~~vmi~----------v~~iQVf~lrslFe~~~~~~t~~~  234 (236)
T KOG3287|consen  193 NFDRVNFWSMVQTLVMIL----------VGIIQVFMLRSLFEVKSKSDTKKR  234 (236)
T ss_pred             ccchhhHHHHHHHHHHHH----------HhhhhhhhhHHHhcCCCCcccccc
Confidence            999999999999999999          899999999999997665555544

>KOG1692|consensus

Probab=99.97  E-value=8.9e-32  Score=243.97  Aligned_cols=152  Identities=55%  Similarity=0.897  Sum_probs=135.2

Q ss_pred             ceeeecCCceEEEEEECCCCCeEecceeeecceeEEEeeecccEEEEeecccCCCcceEEEEEEEEeecCCCCCCCCcce
Q psy13839          2 FEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKG   81 (413)
Q Consensus         2 yqV~~GG~~dIdf~i~~P~g~~i~~~~~~~~g~~~f~~~~~G~y~~CF~N~~s~~t~k~V~f~v~v~~~~~~~~~~~~~~   81 (413)
                      |+|++||+++||+.|++|+|++|+...+++.|+|+|+++.+|.|++||+|++|++++|+|.|++++.....         
T Consensus        47 F~v~~gg~~~vd~~I~gP~~~~i~~~~~~ssgk~tF~a~~~G~Y~fCF~N~~s~mtpk~V~F~ihvg~~~~---------  117 (201)
T KOG1692|consen   47 FEVIDGGFLGVDVEITGPDGKIIHKGKRESSGKYTFTAPKKGTYTFCFSNKMSTMTPKTVMFTIHVGHAPQ---------  117 (201)
T ss_pred             EEEecCCccceeEEEECCCCchhhhcccccCceEEEEecCCceEEEEecCCCCCCCceEEEEEEEEeeccc---------
Confidence            89999999999999999999999999999999999999999999999999999999999999998865421         


Q ss_pred             EEEEeeecCceeEEEEEECCCCCeEeeceeeccceEEEEeecceeEEEEEeeCCCCCCceEEEEEEEEcccCCCCCcccc
Q psy13839         82 LMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGE  161 (413)
Q Consensus        82 ~~yqV~~Gg~~dI~v~v~dP~g~~l~~~~~~~~g~f~fta~~~G~y~~Cf~N~~s~~~~k~V~f~~~v~~~~~~~~~~~~  161 (413)
                                           ....                                          ..+.         
T Consensus       118 ---------------------~~d~------------------------------------------~~d~---------  125 (201)
T KOG1692|consen  118 ---------------------RDDL------------------------------------------AKDA---------  125 (201)
T ss_pred             ---------------------cchh------------------------------------------cccc---------
Confidence                                 0000                                          0000         


Q ss_pred             ccccccccccCCCCCCCCccccccCCCccchhcccccccCCCCCCcchhhhhhhccCCCCCCCcCCCCcchHHHHHHHHH
Q psy13839        162 KGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLG  241 (413)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~l~~L~  241 (413)
                                    +.                                                     ++|+..+++|+
T Consensus       126 --------------~~-----------------------------------------------------~~L~~~I~eL~  138 (201)
T KOG1692|consen  126 --------------HQ-----------------------------------------------------NKLEEMIRELS  138 (201)
T ss_pred             --------------cc-----------------------------------------------------cHHHHHHHHHH
Confidence                          00                                                     03788999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhHHhhhheeeccccccCCCCccceeHHHHHHHhhhh
Q psy13839        242 ESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHA  311 (413)
Q Consensus       242 ~~l~~I~~eQ~y~r~RE~~~r~~~Estn~rV~~wSi~qivvli~~~~~~~~~~~~~~~qi~~lk~~f~~~  311 (413)
                      +.|..++.||.|+..||.+||++||+||+||.|||++|.++||+          +++.||++||+||..+
T Consensus       139 ~al~~Vk~EQeY~~~Rer~Hr~~nEntn~RVv~wsife~~vLi~----------~s~~QVyYLkRfFEvk  198 (201)
T KOG1692|consen  139 EALTSVKHEQEYMEARERIHRNTNENTNSRVVLWSIFEALVLIA----------MSVLQVYYLKRFFEVK  198 (201)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHhhhcccceeehHHHHHHHHHHH----------HHHHHHHHHHHhheee
Confidence            99999999999999999999999999999999999999999999          9999999999999864

>KOG1691|consensus

Probab=99.97  E-value=6.5e-30  Score=235.85  Aligned_cols=184  Identities=28%  Similarity=0.472  Sum_probs=151.9

Q ss_pred             EEEeeecccEEEEeecccCCCcceEEEEEEEEeecCCCCCCCCcceEEEEeeecCceeEEEEEECCCCCeEeeceeeccc
Q psy13839         36 TFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEGGFLDIDVRITGPDGNIIYQGERESSG  115 (413)
Q Consensus        36 ~f~~~~~G~y~~CF~N~~s~~t~k~V~f~v~v~~~~~~~~~~~~~~~~yqV~~Gg~~dI~v~v~dP~g~~l~~~~~~~~g  115 (413)
                      .|+.+.++  ++|+.+++-....+++.|.+.....                  ++...+++.|+||.|+.+++.+...+|
T Consensus        24 ~f~v~~~~--~kCi~EeI~~n~lv~g~y~i~~~~~------------------~~~~~~~~~Vts~~G~~~~~~env~~g   83 (210)
T KOG1691|consen   24 RFDVPSKT--TKCISEEIHENVLVVGDYEIINPNG------------------DHSHKLSVKVTSPYGNNLHSKENVTKG   83 (210)
T ss_pred             EEEecCCC--CEeehhhhccCeEEEEEEEEecCCC------------------CccceEEEEEEcCCCceeehhhccccc
Confidence            46666666  8999999988777777777643211                  122789999999999999999999999


Q ss_pred             eEEEEeecceeEEEEEeeCCCCCCc---eEEEEEEEEcccCCCCCccccccccccccccCCCCCCCCccccccCCCccch
Q psy13839        116 KYTFSAHMSGVYTYCFSNQMSTMTP---KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKFV  192 (413)
Q Consensus       116 ~f~fta~~~G~y~~Cf~N~~s~~~~---k~V~f~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~  192 (413)
                      +|+|||.++|.|.+||.|....-.+   ..|.||+..|.+.              ++|                      
T Consensus        84 qFaFta~e~~~y~~Cf~~~~~~~~p~~~~~I~ld~k~Gv~a--------------kdw----------------------  127 (210)
T KOG1691|consen   84 QFAFTAEESGMYEACFTADVPGHKPETKRSIDLDWKTGVEA--------------KDW----------------------  127 (210)
T ss_pred             eEEEEeccCCcEEEEEecccCCCCCCcceEEEEEeeccccc--------------cch----------------------
Confidence            9999999999999999995433222   4688888777541              111                      


Q ss_pred             hcccccccCCCCCCcchhhhhhhccCCCCCCCcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccch
Q psy13839        193 IRTADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRV  272 (413)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~l~~L~~~l~~I~~eQ~y~r~RE~~~r~~~Estn~rV  272 (413)
                                                                                                      
T Consensus       128 --------------------------------------------------------------------------------  127 (210)
T KOG1691|consen  128 --------------------------------------------------------------------------------  127 (210)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhhHHhhhheeeccccccCCCCccceeHHHHHHHhhhhcccCCCCCCCCccchhhhhhhhcccCCchhHHHHHHHHHHH
Q psy13839        273 VWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAKDKLHSKPTNSSSIKHLEKIVFFFFSGEPNLQDMIRQLGES  352 (413)
Q Consensus       273 ~~wSi~qivvli~~~~~~~~~~~~~~~qi~~lk~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~v~~L~~~  352 (413)
                                                                        ++|..-|        +++|+|.++++|.+.
T Consensus       128 --------------------------------------------------~~IAKke--------klep~E~elrrLed~  149 (210)
T KOG1691|consen  128 --------------------------------------------------DSIAKKE--------KLEPLEVELRRLEDL  149 (210)
T ss_pred             --------------------------------------------------HHHHhhh--------cCcHHHHHHHHHHHH
Confidence                                                              1111112        288999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Q psy13839        353 LTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVRRVV  413 (413)
Q Consensus       353 l~~I~~eq~y~r~RE~~~r~t~Estn~RV~~wSi~q~~vLi~vs~~Qv~~Lk~fF~~Kkiv  413 (413)
                      +.+|++|..|+|.||+++|+++|+||+||.|+|++.++|++++++||++|||+||++||+|
T Consensus       150 ~~sI~~e~~YLr~REeemr~~nesTNsrv~~fSi~Sl~v~~~va~~QvlyLK~fF~kKKLI  210 (210)
T KOG1691|consen  150 VESIHEEMYYLREREEEMRNTNESTNSRVAWFSILSLVVLLSVAGWQVLYLKRFFQKKKLI  210 (210)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            9999999999999999999999999999999999999999999999999999999999987

>KOG1693|consensus

Probab=99.96  E-value=4.7e-30  Score=234.02  Aligned_cols=156  Identities=31%  Similarity=0.608  Sum_probs=136.4

Q ss_pred             CceeeecCCceEEEEEECCCCCeEecceeeecceeEEEeeecccEEEEeecccCCCcceEEEEEEEEeecCCCCCCCCcc
Q psy13839          1 MFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEK   80 (413)
Q Consensus         1 ~yqV~~GG~~dIdf~i~~P~g~~i~~~~~~~~g~~~f~~~~~G~y~~CF~N~~s~~t~k~V~f~v~v~~~~~~~~~~~~~   80 (413)
                      +|||+.||++||||.|.+|+|++|+++.+++.++|.|++...|+|++||+|++++.+.|+|++...+.++.+.-      
T Consensus        50 ~fqV~tGG~fDVD~~I~aPdgkvI~~~~kk~~~~~~f~ae~~G~Y~fCFsN~fstf~~Kiv~~~~q~~~~~~~~------  123 (209)
T KOG1693|consen   50 EFQVQTGGHFDVDYDIEAPDGKVIYSEKKKRYDSFLFKAEGKGEYTFCFSNEFSTFSHKIVYMDFQVGEEPPLH------  123 (209)
T ss_pred             EEEEEeCCceeeEEEEECCCCCEEeeccccccccEEEEEecceEEEEEecCccccccceEeeehhhhccccccC------
Confidence            59999999999999999999999999999999999999999999999999999999999999998776543210      


Q ss_pred             eEEEEeeecCceeEEEEEECCCCCeEeeceeeccceEEEEeecceeEEEEEeeCCCCCCceEEEEEEEEcccCCCCCccc
Q psy13839         81 GLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKG  160 (413)
Q Consensus        81 ~~~yqV~~Gg~~dI~v~v~dP~g~~l~~~~~~~~g~f~fta~~~G~y~~Cf~N~~s~~~~k~V~f~~~v~~~~~~~~~~~  160 (413)
                                                                                  ..      ++...       
T Consensus       124 ------------------------------------------------------------~~------~~~~~-------  130 (209)
T KOG1693|consen  124 ------------------------------------------------------------PA------VSNRD-------  130 (209)
T ss_pred             ------------------------------------------------------------cc------ccccc-------
Confidence                                                                        00      00110       


Q ss_pred             cccccccccccCCCCCCCCccccccCCCccchhcccccccCCCCCCcchhhhhhhccCCCCCCCcCCCCcchHHHHHHHH
Q psy13839        161 EKGNRYAKNISAKPKGLNPAKDKLYSKPTKFVIRTADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQL  240 (413)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~l~~L  240 (413)
                                        +++                                                 ..++..+..|
T Consensus       131 ------------------~~~-------------------------------------------------~~mena~~~I  143 (209)
T KOG1693|consen  131 ------------------TAL-------------------------------------------------TQMENAIVEI  143 (209)
T ss_pred             ------------------hHH-------------------------------------------------HHHHHHHHHH
Confidence                              000                                                 1377889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhHHhhhheeeccccccCCCCccceeHHHHHHHhhhhc
Q psy13839        241 GESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLNHAK  312 (413)
Q Consensus       241 ~~~l~~I~~eQ~y~r~RE~~~r~~~Estn~rV~~wSi~qivvli~~~~~~~~~~~~~~~qi~~lk~~f~~~~  312 (413)
                      +++|+.|.+.|+|+|.||++.|.++||||+||+|||+++++++++          +++.|+.-||.||..+.
T Consensus       144 ~~~L~~I~~~q~y~R~RE~rn~~tv~st~~Rv~~~Sl~e~~~vv~----------iSi~Qv~ilk~fFt~~r  205 (209)
T KOG1693|consen  144 HRALNKIDDTQTYYRLREARNRSTVESTNSRVTWWSLLEIIAVVV----------ISIAQVFILKFFFTDRR  205 (209)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccchhcccchhhHHHHHHHHHHHH----------HHHHHHHHHHHHHhccC
Confidence            999999999999999999999999999999999999999999999          99999999999998654

>PF01105 EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro: IPR009038 The GOLD (for Golgi dynamics) domain is a protein module found in several eukaryotic Golgi and lipid-traffic proteins

Probab=99.93  E-value=6.1e-28  Score=218.62  Aligned_cols=177  Identities=31%  Similarity=0.600  Sum_probs=5.5

Q ss_pred             EEeeecccEEEEeecccCCCcceEEEEEEEEeecCCCCCCCCcceEEEEeeecC-ceeEEEEEE--CCCCCeEeeceee-
Q psy13839         37 FSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLSTQPSEDDKGEKGLMFEISEGG-FLDIDVRIT--GPDGNIIYQGERE-  112 (413)
Q Consensus        37 f~~~~~G~y~~CF~N~~s~~t~k~V~f~v~v~~~~~~~~~~~~~~~~yqV~~Gg-~~dI~v~v~--dP~g~~l~~~~~~-  112 (413)
                      +++..+++.+.||..+.+.+                     +.+.+.|++.+|+ ..+|++.|+  +|+|++++..... 
T Consensus         2 ~~f~l~~g~~~Cf~e~v~~~---------------------~~i~~~y~v~~~~~~~~v~~~i~~~~~~~~~i~~~~~~~   60 (183)
T PF01105_consen    2 LTFELEPGETECFYEEVPKG---------------------TTIRGSYRVTDGGGAYDVDFTIRDPDPNGEVIYSKSDKE   60 (183)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             EEEEECCCCcEEEEEEcCCC---------------------cEEEEEEEEeeccccceEEEEEEecccCCceeeeecccc
Confidence            45566777899999998653                     3456677777777 899999999  6667999998555 


Q ss_pred             ccceEEEEeecceeEEEEEeeCCCCCCc-eEEEEEEEEcccCCCCCccccccccccccccCCCCCCCCccccccCCCccc
Q psy13839        113 SSGKYTFSAHMSGVYTYCFSNQMSTMTP-KVVMFNMEVLSTQPSEDDKGEKGNRYAKNISAKPKGLNPAKDKLYSKPTKF  191 (413)
Q Consensus       113 ~~g~f~fta~~~G~y~~Cf~N~~s~~~~-k~V~f~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~  191 (413)
                      ++|+|+|+++++|+|++||+|..+.+++ +.|+|++.++.....          +                         
T Consensus        61 ~~~~f~f~~~~~G~y~iCf~n~~~~~~~~~~v~~~~~~~~~~~~----------~-------------------------  105 (183)
T PF01105_consen   61 SEGSFSFTAKESGEYQICFDNSSSSFSPSKRVSFDIDVGNENKD----------Y-------------------------  105 (183)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCCcEEEEeccCCCEEEEEEcCCCCccccEEEEEEEEEeecccc----------h-------------------------
Confidence            5579999999999999999999998777 899999988754110          0                         


Q ss_pred             hhcccccccCCCCCCcchhhhhhhccCCCCCCCcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy13839        192 VIRTADFLLFCPPSFDLGMIKLLFLSTQPSEDDKGEKGEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSR  271 (413)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~l~~L~~~l~~I~~eQ~y~r~RE~~~r~~~Estn~r  271 (413)
                                                    ...+..+++++++..|.+|...+..|+++|.|++.||++++.++|+++.|
T Consensus       106 ------------------------------~~~~~~~~~~~~~~~l~~l~~~l~~i~~~q~~~~~r~~~~~~~~es~~~~  155 (183)
T PF01105_consen  106 ------------------------------KNVAKKEHLDPLEESLEKLESNLKEIKDEQKYLREREERHRQLNESTNSR  155 (183)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ------------------------------hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhe
Confidence                                          00112456788999999999999999999999999999999999999999


Q ss_pred             hhhhhHHhhhheeeccccccCCCCccceeHHHHHHHhh
Q psy13839        272 VVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLLN  309 (413)
Q Consensus       272 V~~wSi~qivvli~~~~~~~~~~~~~~~qi~~lk~~f~  309 (413)
                      |+|||++|+++|++          +++||+++||+||+
T Consensus       156 i~~~si~~~~vli~----------~~~~Qv~~lk~~f~  183 (183)
T PF01105_consen  156 IMWWSIIQIVVLIL----------VSVWQVYYLKKFFK  183 (183)
T ss_dssp             --------------------------------HHHHHH
T ss_pred             EEhHHHHHHHHHHH----------HHHHHHHHHHHHhC
Confidence            99999999999999          99999999999996

It is typically between 90 and 150 amino acids long. Most of the size difference observed in the GOLD-domain superfamily is traceable to a single large low-complexity insert that is seen in some versions of the domain. With the exception of the p24 proteins, which have a simple architecture with the GOLD domain as their only globular domain, all other GOLD-domain proteins contain additional conserved globular domains. In these proteins, the GOLD domain co-occurs with lipid-, sterol- or fatty acid-binding domains such as PH, CRAL-TRIO, FYVE oxysterol binding- and acyl CoA-binding domains, suggesting that these proteins may interact with membranes. The GOLD domain can also be found associated with a RUN domain, which may have a role in the interaction of various proteins with cytoskeletal filaments. The GOLD domain is predicted to mediate diverse protein-protein interactions []. A secondary structure prediction for the GOLD domain reveals that it is likely to adopt a compact all-beta-fold structure with six to seven strands. Most of the sequence conservation is centred on the hydrophobic cores that support these predicted strands. The predicted secondary-structure elements and the size of the conserved core of the domain suggests that it may form a beta- sandwich fold with the strands arranged in two beta sheets stacked on each other []. Some proteins known to contain a GOLD domain are listed below: Eukaryotic proteins of the p24 family. Animal Sec14-like proteins. They are involved in secretion. Human Golgi resident protein GCP60. It interacts with the Golgi integral membrane protein Giantin. Yeast oxysterol-binding protein homologue 3 (OSH3). ; GO: 0006810 transport, 0016021 integral to membrane; PDB: 1P23_A 1M23_A.

>KOG1691|consensus

Probab=99.84  E-value=2.2e-20  Score=172.84  Aligned_cols=74  Identities=32%  Similarity=0.492  Sum_probs=71.4

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhHHhhhheeeccccccCCCCccceeHHHHHHHh
Q psy13839        229 GEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVNHAKDKLHSKPTNSSSIKHLKKLL  308 (413)
Q Consensus       229 ~~~~l~~~l~~L~~~l~~I~~eQ~y~r~RE~~~r~~~Estn~rV~~wSi~qivvli~~~~~~~~~~~~~~~qi~~lk~~f  308 (413)
                      ++++++.++++|++.+.+|.++..|+|.||++||++||+||+||.|+|++.++++++          .+.||+.|||+||
T Consensus       135 klep~E~elrrLed~~~sI~~e~~YLr~REeemr~~nesTNsrv~~fSi~Sl~v~~~----------va~~QvlyLK~fF  204 (210)
T KOG1691|consen  135 KLEPLEVELRRLEDLVESIHEEMYYLREREEEMRNTNESTNSRVAWFSILSLVVLLS----------VAGWQVLYLKRFF  204 (210)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH----------HHHHHHHHHHHHH
Confidence            466799999999999999999999999999999999999999999999999999999          8899999999999


Q ss_pred             hhhc
Q psy13839        309 NHAK  312 (413)
Q Consensus       309 ~~~~  312 (413)
                      +++|
T Consensus       205 ~kKK  208 (210)
T KOG1691|consen  205 QKKK  208 (210)
T ss_pred             Hhcc
Confidence            9987

>KOG1690|consensus

Probab=99.80  E-value=1e-19  Score=166.27  Aligned_cols=75  Identities=39%  Similarity=0.613  Sum_probs=72.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Q psy13839        339 EPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVRRVV  413 (413)
Q Consensus       339 ~~~le~~v~~L~~~l~~I~~eq~y~r~RE~~~r~t~Estn~RV~~wSi~q~~vLi~vs~~Qv~~Lk~fF~~Kkiv  413 (413)
                      .+.++.+++.|.+++.+|++||+|+|.||+++|+++||+|+||+|||++|+++|+++|+||+.|||+||.++|+|
T Consensus       141 ~k~l~~Rv~~L~~~~~~IrkEQ~~~R~RE~~FR~tSES~NsRvm~Wsv~Q~vvL~~tc~wQmrhL~~FFvkqKlv  215 (215)
T KOG1690|consen  141 DKLLEGRVRQLNSRLESIRKEQNLQREREETFRDTSESANSRVMWWSVAQLVVLLVTCIWQMRHLKSFFVKQKLV  215 (215)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcceeeehhHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            557899999999999999999999999999999999999999999999999999999999999999999999986

>PF01105 EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro: IPR009038 The GOLD (for Golgi dynamics) domain is a protein module found in several eukaryotic Golgi and lipid-traffic proteins

Probab=99.39  E-value=5.7e-14  Score=127.05  Aligned_cols=71  Identities=42%  Similarity=0.838  Sum_probs=5.6

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy13839        338 GEPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFE  408 (413)
Q Consensus       338 ~~~~le~~v~~L~~~l~~I~~eq~y~r~RE~~~r~t~Estn~RV~~wSi~q~~vLi~vs~~Qv~~Lk~fF~  408 (413)
                      ++++++..|.+|...++.|+++|.|++.|+++|+.++|++++||+||+++++++|+++++||++|||+||+
T Consensus       113 ~~~~~~~~l~~l~~~l~~i~~~q~~~~~r~~~~~~~~es~~~~i~~~si~~~~vli~~~~~Qv~~lk~~f~  183 (183)
T PF01105_consen  113 HLDPLEESLEKLESNLKEIKDEQKYLREREERHRQLNESTNSRIMWWSIIQIVVLILVSVWQVYYLKKFFK  183 (183)
T ss_dssp             -----------------------------------------------------------------HHHHHH
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheEEhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            38899999999999999999999999999999999999999999999999999999999999999999996

It is typically between 90 and 150 amino acids long. Most of the size difference observed in the GOLD-domain superfamily is traceable to a single large low-complexity insert that is seen in some versions of the domain. With the exception of the p24 proteins, which have a simple architecture with the GOLD domain as their only globular domain, all other GOLD-domain proteins contain additional conserved globular domains. In these proteins, the GOLD domain co-occurs with lipid-, sterol- or fatty acid-binding domains such as PH, CRAL-TRIO, FYVE oxysterol binding- and acyl CoA-binding domains, suggesting that these proteins may interact with membranes. The GOLD domain can also be found associated with a RUN domain, which may have a role in the interaction of various proteins with cytoskeletal filaments. The GOLD domain is predicted to mediate diverse protein-protein interactions []. A secondary structure prediction for the GOLD domain reveals that it is likely to adopt a compact all-beta-fold structure with six to seven strands. Most of the sequence conservation is centred on the hydrophobic cores that support these predicted strands. The predicted secondary-structure elements and the size of the conserved core of the domain suggests that it may form a beta- sandwich fold with the strands arranged in two beta sheets stacked on each other []. Some proteins known to contain a GOLD domain are listed below: Eukaryotic proteins of the p24 family. Animal Sec14-like proteins. They are involved in secretion. Human Golgi resident protein GCP60. It interacts with the Golgi integral membrane protein Giantin. Yeast oxysterol-binding protein homologue 3 (OSH3). ; GO: 0006810 transport, 0016021 integral to membrane; PDB: 1P23_A 1M23_A.

>KOG3287|consensus

Probab=99.35  E-value=2.3e-12  Score=119.76  Aligned_cols=74  Identities=26%  Similarity=0.500  Sum_probs=71.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy13839        339 EPNLQDMIRQLGESLTSVKHEQEYMSVRDRIHRSINESTNSRVVWWSFFEAVVLVTMTIGQIYYLKRFFEVRRV  412 (413)
Q Consensus       339 ~~~le~~v~~L~~~l~~I~~eq~y~r~RE~~~r~t~Estn~RV~~wSi~q~~vLi~vs~~Qv~~Lk~fF~~Kki  412 (413)
                      ++++++.+..++.+|+.+...|..+|+||+|.|.+.||+-.||.|||++|+++||+++++||++|||+|+.|+-
T Consensus       155 l~di~~~i~~i~~nl~k~~~~q~~lRa~EaRDr~L~esNf~rVN~WS~vq~~vmi~v~~iQVf~lrslFe~~~~  228 (236)
T KOG3287|consen  155 LDDIEDSIGTIKNNLNKMWQYQALLRAREARDRNLQESNFDRVNFWSMVQTLVMILVGIIQVFMLRSLFEVKSK  228 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcccchhhHHHHHHHHHHHHHhhhhhhhhHHHhcCCCC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999998863

>PHA02148 hypothetical protein

Probab=89.17  E-value=4.1  Score=33.69  Aligned_cols=91  Identities=15%  Similarity=0.150  Sum_probs=74.7

Q ss_pred             HHHHHHh--hhhcccCCCCCCCCccc--hhhhhhhhcccCCchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhh
Q psy13839        302 KHLKKLL--NHAKDKLHSKPTNSSSI--KHLEKIVFFFFSGEPNLQDMIRQLGESLTSVK-HEQEYMSVRDRIHRSINES  376 (413)
Q Consensus       302 ~~lk~~f--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~le~~v~~L~~~l~~I~-~eq~y~r~RE~~~r~t~Es  376 (413)
                      +.|-++|  ++++.+|.-+|.|-+-+  .++|-        .+.+|++|-.=+..|.++- +.|+-+|..|..-|...|+
T Consensus         6 ~~~~K~F~~~~~~i~P~v~~~~i~~~k~~A~E~--------FK~iE~RIA~D~~~L~~~A~~R~NEL~~HE~Air~~M~~   77 (110)
T PHA02148          6 WNLIKMFQMKKTKIEPTVTPLPISDLKVEAFEL--------FKKIEERIAHDQTRLEELAKSRENELRRHEAAIRLAMDS   77 (110)
T ss_pred             hHHHHHHHccccccCCCCCCCChhHHHHHHHHH--------HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3566788  78899999999887776  34555        4688999988888887774 5678899999999999999


Q ss_pred             hcchhHHHHHHHHHHHHHHHHHHH
Q psy13839        377 TNSRVVWWSFFEAVVLVTMTIGQI  400 (413)
Q Consensus       377 tn~RV~~wSi~q~~vLi~vs~~Qv  400 (413)
                      -....--.|+=|.++.=.+-+.|+
T Consensus        78 HS~~M~~LS~~~~LiSDS~K~~~~  101 (110)
T PHA02148         78 HSIKMDDLSLQEALISDSLKGGKY  101 (110)
T ss_pred             HHHHhccchHHHHHHHHHHHHHHH
Confidence            999999999999998888877775

>PF13897 GOLD_2: Golgi-dynamics membrane-trafficking

Probab=86.86  E-value=0.74  Score=40.75  Aligned_cols=31  Identities=23%  Similarity=0.360  Sum_probs=26.8

Q ss_pred             EEEeecceeEEEEEeeCCCCCCceEEEEEEE
Q psy13839        118 TFSAHMSGVYTYCFSNQMSTMTPKVVMFNME  148 (413)
Q Consensus       118 ~fta~~~G~y~~Cf~N~~s~~~~k~V~f~~~  148 (413)
                      +++.+..|.|.++|+|++|.|..|+|++.+.
T Consensus       104 s~~c~~~GvYvLkFDNSYS~~rsK~l~Y~V~  134 (136)
T PF13897_consen  104 SHTCPGPGVYVLKFDNSYSWFRSKKLYYRVY  134 (136)
T ss_pred             EEECCCCeEEEEEeeCcceeEEeeEEEEEEE
Confidence            4567789999999999999999999988763

>PRK14081 triple tyrosine motif-containing protein; Provisional

Probab=84.17  E-value=16  Score=40.50  Aligned_cols=122  Identities=16%  Similarity=0.244  Sum_probs=80.0

Q ss_pred             CceEEEEEECCCCCeEecceeeecceeEEEeeecccEEE-EeecccCCCc----ceEEEEEEEEeec-------CCCCCC
Q psy13839          9 FLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTY-CFSNQMSTMT----PKVVMFNMEVLST-------QPSEDD   76 (413)
Q Consensus         9 ~~dIdf~i~~P~g~~i~~~~~~~~g~~~f~~~~~G~y~~-CF~N~~s~~t----~k~V~f~v~v~~~-------~~~~~~   76 (413)
                      ++--.|+|.+ +|....-.+--+...+++++..+|.|+. |.--++.+..    ...|.|++.-..+       ..+.+.
T Consensus       125 ~~LYKF~I~~-~~~w~~iqDYst~n~lsyt~~~~G~Y~ll~~~Kd~~S~~~fDD~~~v~y~Vk~~~~v~I~~F~~lns~~  203 (667)
T PRK14081        125 PLMYRYWIKE-DNNWKLIKDYSTENSLSYTANKPGKYELLVECKRIDSTKDFDDFKKVKFKVKEIDKVEITDFKCLNKEL  203 (667)
T ss_pred             cEEEEEEEcC-CCcEEEEEecCCcceEEEEecCCCcEEEEEEEecCCCccccCcceEEEEEcccCcceEEEeccccCcce
Confidence            3555677665 5666666677778999999999998886 5544444332    3556666643221       111111


Q ss_pred             CCcceEEEEe----eecCceeEEEEEECCCCCeEeeceeeccceEEEEeecceeEEE-EE
Q psy13839         77 KGEKGLMFEI----SEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTY-CF  131 (413)
Q Consensus        77 ~~~~~~~yqV----~~Gg~~dI~v~v~dP~g~~l~~~~~~~~g~f~fta~~~G~y~~-Cf  131 (413)
                      ...=.+.|.+    .+|..+--.+.+.+++|.....+.......|++++..+|.|++ |.
T Consensus       204 i~~~eI~f~~~a~~~~g~~~LYKF~~i~~~G~~~~~qdYst~n~~~y~~~~~G~Y~i~~~  263 (667)
T PRK14081        204 ICDEELVFEVESVYEEDRTILYKFVKIDSDGKQTCIQDYSTKNIVSYKEKKSGDYKLLCL  263 (667)
T ss_pred             ecCcEEEEEEEEEeCCCceEEEEEEEECCCCCEEEecCccccceEEEEeCCCccEEEEEE
Confidence            1112333442    2334466677788899998888888999999999999999987 44

>smart00557 IG_FLMN Filamin-type immunoglobulin domains

Probab=81.98  E-value=7.6  Score=31.60  Aligned_cols=45  Identities=24%  Similarity=0.479  Sum_probs=31.3

Q ss_pred             CceeEEEEEECCCCCeEeec-eeeccceE--EEEeecceeEEEEEeeC
Q psy13839         90 GFLDIDVRITGPDGNIIYQG-ERESSGKY--TFSAHMSGVYTYCFSNQ  134 (413)
Q Consensus        90 g~~dI~v~v~dP~g~~l~~~-~~~~~g~f--~fta~~~G~y~~Cf~N~  134 (413)
                      |..++.+.|++|+|+.+.-. .....|.|  +|+....|.|.+...-.
T Consensus        30 G~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~P~~~G~~~i~V~~~   77 (93)
T smart00557       30 GGGELEVEVTGPSGKKVPVEVKDNGDGTYTVSYTPTEPGDYTVTVKFG   77 (93)
T ss_pred             CCCcEEEEEECCCCCeeEeEEEeCCCCEEEEEEEeCCCEeEEEEEEEC
Confidence            45789999999999655433 33444544  77778888888776543

These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).

>PRK14081 triple tyrosine motif-containing protein; Provisional

Probab=80.93  E-value=31  Score=38.39  Aligned_cols=138  Identities=14%  Similarity=0.174  Sum_probs=81.4

Q ss_pred             CCceEEEEEECCCCCeEecceeeecceeEEEeeecccEEE-EeecccCCCc----ceEEEEEEEEeec--------CCCC
Q psy13839          8 GFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTY-CFSNQMSTMT----PKVVMFNMEVLST--------QPSE   74 (413)
Q Consensus         8 G~~dIdf~i~~P~g~~i~~~~~~~~g~~~f~~~~~G~y~~-CF~N~~s~~t----~k~V~f~v~v~~~--------~~~~   74 (413)
                      +.+-=.|.+.+++|....-..--+...|+++...+|.|+. |.--++++..    .....|.|....+        +.+.
T Consensus       221 ~~~LYKF~~i~~~G~~~~~qdYst~n~~~y~~~~~G~Y~i~~~VKD~~S~~eyDD~~~l~y~Vk~~~~vkI~~~~~d~~s  300 (667)
T PRK14081        221 RTILYKFVKIDSDGKQTCIQDYSTKNIVSYKEKKSGDYKLLCLVKDMYSNNEFDDRAVLVYTVKPYKDIKIRNFTTDLSS  300 (667)
T ss_pred             ceEEEEEEEECCCCCEEEecCccccceEEEEeCCCccEEEEEEEeccCcccccccceEEEEEEecCCCcEEEEEEEcCCC
Confidence            3566778888999998888888899999999999999884 7777766543    3445555522211        0000


Q ss_pred             --CCCCcceEEEEeeecCceeEEEEEECCCCCeEeeceeeccceEEEEeecceeEEEEEeeCCC--C--C-CceEEEEEE
Q psy13839         75 --DDKGEKGLMFEISEGGFLDIDVRITGPDGNIIYQGERESSGKYTFSAHMSGVYTYCFSNQMS--T--M-TPKVVMFNM  147 (413)
Q Consensus        75 --~~~~~~~~~yqV~~Gg~~dI~v~v~dP~g~~l~~~~~~~~g~f~fta~~~G~y~~Cf~N~~s--~--~-~~k~V~f~~  147 (413)
                        ..+..+.+.=-...|..+.-.+.|.   |..+-.........|+|++..+|.|.+=+.=...  .  + .++.+.|.+
T Consensus       301 ~ql~g~~I~ika~a~GG~~llYrf~I~---G~~~e~~~Y~~~n~~~w~P~~~G~Y~I~v~VKDk~S~~eyD~~~~v~f~i  377 (667)
T PRK14081        301 PQLTDTDIELKAVAEGGKELLYRFIIK---GKESEDSGYIRNNIYTWKPKIAGKYSITLWVKDISSKGEYEDKSSIDYTI  377 (667)
T ss_pred             CeecCceEEEEEEecCCCceEEEEEEC---CcEEeeccccccceEEEeeCCCceEEEEEEEEcCcCcccccceEEEEEEE
Confidence              0111111111111222233333332   3334334456677999999999999998754433  2  2 245666655


Q ss_pred             E
Q psy13839        148 E  148 (413)
Q Consensus       148 ~  148 (413)
                      .
T Consensus       378 ~  378 (667)
T PRK14081        378 E  378 (667)
T ss_pred             c
Confidence            4

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	413
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	92.53
2k7p_A	188	Filamin-A; IG-like, ABP-280, actin binding protein	88.86
2k7q_A	191	Filamin-A; IG-like, ABP-280, actin binding protein	84.11
1qfh_A	212	Protein (gelation factor); actin binding protein,	81.47
2d7n_A	93	Filamin-C; beta-sandwich, immunoglobulin-like fold	80.48

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*

Probab=92.53  E-value=0.93  Score=45.20  Aligned_cols=37  Identities=32%  Similarity=0.450  Sum_probs=32.3

Q ss_pred             eEEEEeecceeEEEEEeeCCCCCCceEEEEEEEEccc
Q psy13839        116 KYTFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLST  152 (413)
Q Consensus       116 ~f~fta~~~G~y~~Cf~N~~s~~~~k~V~f~~~v~~~  152 (413)
                      +=+|++.++|.|.+||+|++|.+..|.|.+.+.+...
T Consensus       350 ~G~~~~~~~G~y~l~fdNs~S~~~~k~l~y~v~v~~~  386 (403)
T 1olm_A          350 DGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLLP  386 (403)
T ss_dssp             EEEEECCSCEEEEEEEECTTCCCCSEEEEEEEEEECC
T ss_pred             cCEEEcCCCeEEEEEEeccccceeceEEEEEEEEeCC
Confidence            3457799999999999999999899999999988754

>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}

Probab=88.86  E-value=6.7  Score=34.94  Aligned_cols=122  Identities=14%  Similarity=0.176  Sum_probs=66.0

Q ss_pred             CCceEEEEEECCCCCeEecc-eeeeccee--EEEeeecccEEEEeecc--cCCCcceEEEEEEEEeecCC---------C
Q psy13839          8 GFLDIDVRITGPDGNIIYQG-ERESSGKY--TFSAHMSGVYTYCFSNQ--MSTMTPKVVMFNMEVLSTQP---------S   73 (413)
Q Consensus         8 G~~dIdf~i~~P~g~~i~~~-~~~~~g~~--~f~~~~~G~y~~CF~N~--~s~~t~k~V~f~v~v~~~~~---------~   73 (413)
                      +.-+|...|.+|+|+..-.. .....|.|  +|+....|.|...-.-.  .-.++.-    .+.+...+.         .
T Consensus        32 ~~~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g~~i~gSPf----~~~V~~~d~~~~~~~G~GL  107 (188)
T 2k7p_A           32 KKGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGSPL----QFYVDYVNCGHVTAYGPGL  107 (188)
T ss_dssp             CSSCEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETTEECTTCSE----EEEECCTTSSSCEEESSTT
T ss_pred             cCceEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECCEecCCCCE----EEEecccCCcceEEeCccc
Confidence            44578899999999876433 33445644  35666667665443332  1122222    222211100         0


Q ss_pred             CCCCCcceEEEEeeec--CceeEEEEEECCCCCeEeeceeeccc--eEEEEeecceeEEEEEeeC
Q psy13839         74 EDDKGEKGLMFEISEG--GFLDIDVRITGPDGNIIYQGERESSG--KYTFSAHMSGVYTYCFSNQ  134 (413)
Q Consensus        74 ~~~~~~~~~~yqV~~G--g~~dI~v~v~dP~g~~l~~~~~~~~g--~f~fta~~~G~y~~Cf~N~  134 (413)
                      ..........|.|..-  +.-.+.+.|.+|.+..+. -.....|  ..+|+..+.|.|.+|..-.
T Consensus       108 ~~~~vg~~~~F~V~t~dag~g~l~v~I~gp~~~~~~-~~d~~dGty~v~Y~p~~~G~y~i~V~~~  171 (188)
T 2k7p_A          108 THGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEIS-CTDNQDGTCSVSYLPVLPGDYSILVKYN  171 (188)
T ss_dssp             TEEETTSCEEEEEECTTCCSSCEEEEEECSSCCEEE-EEECTTSEEEEEEECCSSEEEEEEEEET
T ss_pred             ccceeCccEEEEEEeCCCCCCCeEEEEeCCCCCeEE-EEECCCCEEEEEEEeCCCEEEEEEEEEC
Confidence            0000112345556422  344577888899885543 2344556  5688888889999988643

>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}

Probab=84.11  E-value=10  Score=33.65  Aligned_cols=121  Identities=16%  Similarity=0.213  Sum_probs=65.2

Q ss_pred             cCCceEEEEEECCCCCeEecc-eeeecceeE--EEeeecccEEEEeec---ccCCCcceEEEEEEEEeec----------
Q psy13839          7 GGFLDIDVRITGPDGNIIYQG-ERESSGKYT--FSAHMSGVYTYCFSN---QMSTMTPKVVMFNMEVLST----------   70 (413)
Q Consensus         7 GG~~dIdf~i~~P~g~~i~~~-~~~~~g~~~--f~~~~~G~y~~CF~N---~~s~~t~k~V~f~v~v~~~----------   70 (413)
                      .|.-++...|.+|+|+.+--. ....+|.|.  |+....|.|..-...   .++ ++.    |.+.+...          
T Consensus        28 ~~~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g~~V~-gSP----f~v~V~~~~~~d~~~~~~  102 (191)
T 2k7q_A           28 TDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVA-SSP----IPVVISQSEIGDASRVRV  102 (191)
T ss_dssp             CCSSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETTEECT-TCS----EEEEECGGGTTCGGGCEE
T ss_pred             CCCCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECCEECC-CCC----EEEEEcccCCCCcceEEE
Confidence            455679999999999876443 334445443  566666665422211   121 122    22332210          


Q ss_pred             ---CCCCCCCCcceEEEEeeec--CceeEEEEEECCCCCeEeeceeeccc--eEEEEeecceeEEEEEeeC
Q psy13839         71 ---QPSEDDKGEKGLMFEISEG--GFLDIDVRITGPDGNIIYQGERESSG--KYTFSAHMSGVYTYCFSNQ  134 (413)
Q Consensus        71 ---~~~~~~~~~~~~~yqV~~G--g~~dI~v~v~dP~g~~l~~~~~~~~g--~f~fta~~~G~y~~Cf~N~  134 (413)
                         ... .........|.|..-  |.-.+.+.|.+|.+..+ .-.....|  ..+|+..+.|.|.++..-.
T Consensus       103 ~G~Gl~-~~~~g~~~~F~V~t~dag~g~l~v~V~gp~~~~~-~v~d~~dGty~v~Y~p~~~G~y~i~V~~~  171 (191)
T 2k7q_A          103 SGQGLH-EGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDI-NTEDLEDGTCRVTYCPTEPGNYIINIKFA  171 (191)
T ss_dssp             ESGGGT-EEESSSCEEEEEECGGGCSEEEEEEEEESSCEEE-EEEECTTSCEEEEEEESSCEEEEEEEEET
T ss_pred             eCcccc-ceecCCcEEEEEEeCCCCCCceEEEEECCCCceE-EEEECCCCEEEEEEEeCCCceEEEEEEEC
Confidence               000 000111345666532  44567788889987543 22334556  5678888889888887643

>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10

Probab=81.47  E-value=16  Score=32.77  Aligned_cols=44  Identities=23%  Similarity=0.252  Sum_probs=32.4

Q ss_pred             CceeEEEEEECCCCCeEee-ceeeccc--eEEEEeecceeEEEEEeeC
Q psy13839         90 GFLDIDVRITGPDGNIIYQ-GERESSG--KYTFSAHMSGVYTYCFSNQ  134 (413)
Q Consensus        90 g~~dI~v~v~dP~g~~l~~-~~~~~~g--~f~fta~~~G~y~~Cf~N~  134 (413)
                      |.-.+.+.|.+|+| .+.. -.....|  ..+|+..+.|.|.++..-.
T Consensus       133 G~~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~  179 (212)
T 1qfh_A          133 GGDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLN  179 (212)
T ss_dssp             CCCCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEET
T ss_pred             CCCcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEEC
Confidence            44568999999999 4332 2345667  5588999999999998754

>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10

Probab=80.48  E-value=3.9  Score=32.61  Aligned_cols=47  Identities=9%  Similarity=0.134  Sum_probs=33.6

Q ss_pred             CceeEEEEEECCCCCeEeec-eeeccc--eEEEEeecceeEEEEEeeCCC
Q psy13839         90 GFLDIDVRITGPDGNIIYQG-ERESSG--KYTFSAHMSGVYTYCFSNQMS  136 (413)
Q Consensus        90 g~~dI~v~v~dP~g~~l~~~-~~~~~g--~f~fta~~~G~y~~Cf~N~~s  136 (413)
                      +.-++.+.|.+|+|..+.-. .....|  ..+|+..+.|.|.+|..-...
T Consensus        20 g~~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g~   69 (93)
T 2d7n_A           20 QKGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGN   69 (93)
T ss_dssp             SSSCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEESSS
T ss_pred             CCCCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEECCE
Confidence            44678999999999865432 233455  457888999999999865543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	413
d1olma2	119	Supernatant protein factor (SPF), C-terminal domai	97.22
d1olma2	119	Supernatant protein factor (SPF), C-terminal domai	95.88
d2d7ma1	102	Filamin C {Human (Homo sapiens) [TaxId: 9606]}	83.21

>d1olma2 b.132.1.1 (A:275-393) Supernatant protein factor (SPF), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Supernatant protein factor (SPF), C-terminal domain
superfamily: Supernatant protein factor (SPF), C-terminal domain
family: Supernatant protein factor (SPF), C-terminal domain
domain: Supernatant protein factor (SPF), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.001  Score=54.31  Aligned_cols=35  Identities=34%  Similarity=0.509  Sum_probs=31.8

Q ss_pred             EEEeecceeEEEEEeeCCCCCCceEEEEEEEEccc
Q psy13839        118 TFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLST  152 (413)
Q Consensus       118 ~fta~~~G~y~~Cf~N~~s~~~~k~V~f~~~v~~~  152 (413)
                      +|.+.++|.|.+||+|++|.|..|.|.+.++|..+
T Consensus        78 ~~~~~~~G~Y~l~FDNs~S~~~sK~l~Y~i~v~~P  112 (119)
T d1olma2          78 TLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLLP  112 (119)
T ss_dssp             EEECCSCEEEEEEEECTTCCCCSEEEEEEEEEECC
T ss_pred             EEEcCCCEEEEEEEeCCcceEEeeEEEEEEEEECC
Confidence            57788999999999999999999999999998754

>d1olma2 b.132.1.1 (A:275-393) Supernatant protein factor (SPF), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Supernatant protein factor (SPF), C-terminal domain
superfamily: Supernatant protein factor (SPF), C-terminal domain
family: Supernatant protein factor (SPF), C-terminal domain
domain: Supernatant protein factor (SPF), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.88  E-value=0.013  Score=47.39  Aligned_cols=34  Identities=35%  Similarity=0.523  Sum_probs=31.2

Q ss_pred             EEEeeecccEEEEeecccCCCcceEEEEEEEEee
Q psy13839         36 TFSAHMSGVYTYCFSNQMSTMTPKVVMFNMEVLS   69 (413)
Q Consensus        36 ~f~~~~~G~y~~CF~N~~s~~t~k~V~f~v~v~~   69 (413)
                      +|.+..+|.|.+||+|..|....|.|.|.+.+..
T Consensus        78 ~~~~~~~G~Y~l~FDNs~S~~~sK~l~Y~i~v~~  111 (119)
T d1olma2          78 TLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLL  111 (119)
T ss_dssp             EEECCSCEEEEEEEECTTCCCCSEEEEEEEEEEC
T ss_pred             EEEcCCCEEEEEEEeCCcceEEeeEEEEEEEEEC
Confidence            4788899999999999999999999999998864

>d2d7ma1 b.1.18.10 (A:8-109) Filamin C {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Filamin repeat (rod domain)
domain: Filamin C
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.21  E-value=0.98  Score=34.46  Aligned_cols=45  Identities=27%  Similarity=0.419  Sum_probs=33.2

Q ss_pred             CceeEEEEEECCCCCeEeec-eeeccceE--EEEeecceeEEEEEeeC
Q psy13839         90 GFLDIDVRITGPDGNIIYQG-ERESSGKY--TFSAHMSGVYTYCFSNQ  134 (413)
Q Consensus        90 g~~dI~v~v~dP~g~~l~~~-~~~~~g~f--~fta~~~G~y~~Cf~N~  134 (413)
                      |.-++++.|++|+|+.+.-. .....|.|  +|+..+.|.|.++..-.
T Consensus        35 G~g~l~v~i~~p~g~~~~~~v~~~~dg~y~v~y~P~~~G~h~i~V~~~   82 (102)
T d2d7ma1          35 GEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYG   82 (102)
T ss_dssp             CSSCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEES
T ss_pred             CCCcEEEEEEeCCCCEeeeEEEeCCCcEEEEEEEECCCEeEEEEEEEC
Confidence            44568999999999865443 33445655  89999999999997544