Psyllid ID: psy14077

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290------
ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICEETSSNLWVEANSDAEWVADGSPTHSSTPVKIDSALQFVPKNTNPKEFKKLQQQIKENRRADKITSGPQSQLLEGVSWEEAKKLQDANQSATGDQVILVGAASKELKSLAKKLQDANQSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQRGEFSYDDSESEALSSSAALPPRAGTKPPVSETDDESRDEADLMQDSLG
ccccccccEEEEcccccccccccccccEEEcccccEEcccccccccccHHcccHHHHHHHHHccccccEEEEEccccccccccccccccccccccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHccccccccccHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHcccc
ccccccccEEEEcccccEEcEEEHHHEEEEcccccccccccEEEEEEcccccccHHHHHHHHccccccEEEEccccccccccccccEEEEEcccccccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHEccEEEccccccccccccccccccccccccccccHHHHHccccccccccccEEEEEEcccHHHHcccccccEEEEcccccccccccccHHHHHHHHHHHHHHcccccccccccHccccccccccccccccccccccccccccccHccccccc
arlnvdeeiflvnphgllyneitasslvkvdmrgdiiePVLGLWLSRVEALALAMVSCItrlqprpwskwiceetssnlwveansdaewvadgspthsstpvkidsalqfvpkntnpkEFKKLQQQIKENrradkitsgpqsqllegvSWEEAKKLQdanqsatgdQVILVGAASKELKSLAKKLQDanqsatgdQVILVGAASKGiiqrgfqhnatvyktpyaknpfdqmTDQEIEEYKSTvsrkqrgefsyddsesealsssaalppragtkppvsetddesrdEADLMQDSLG
ARLNVDEEIFLvnphgllynEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITrlqprpwskwICEETSSNLWVEANSDAEWVADGSPTHSSTPVKIDSALQFVPKNTNPKEFKKLQQQIKenrradkitsgpqsqllegVSWEEAKKLQdanqsatgdQVILVGAASKELKSLAKKLQDANQSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYkstvsrkqrgefsyddsesealsssaalppragtkppvsetddesrDEADLMQDSLG
ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICEETSSNLWVEANSDAEWVADGSPTHSSTPVKIDSALQFVPKNTNPKEFKKLQQQIKENRRADKITSGPQSQLLEGVSWEEAKKLQDANQSATGDQVILVGaaskelkslakklQDANQSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQRGEFSYDDsesealsssaalPPRAGTKPPVSETDDESRDEADLMQDSLG
******EEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICEETSSNLWVEANSDAEWV*****************************************************************************VILV***********************DQVILVGAASKGIIQRGFQHNATVYKTPYA************************************************************************
*RLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICEETSSNLW*EA*************HSSTPVKIDSALQFVPKNTNPKEFKKLQQQIKENRRADKITSGPQSQLLEGVSWEEAKKLQ*******************************************************************************************************************************************
ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICEETSSNLWVEANSDAEWVA********TPVKIDSALQFVPKNTNPKEFKKLQQQIKENRRADKITSGPQSQLLEGVSWEEAKKLQDANQSATGDQVILVGAASKELKS************TGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYK********************************************************
*****DEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICEETSSNLWVEANSDAEWVADGSPTHSSTPVKIDSALQFVPKNTNPKEFKKLQQQIKENRRADKITSGPQSQLLEGVSWEEAK***********************LKSL*********SATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRK**************************************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICEETSSNLWVEANSDAEWVADGSPTHSSTPVKIDSALQFVPKNTNPKEFKKLQQQIKENRRADKITSGPQSQLLEGVSWEEAKKLQDANQSATGDQVILxxxxxxxxxxxxxxxxxxxxxATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQRGEFSYDDSESEALSSSAALPPRAGTKPPVSETDDESRDEADLMQDSLG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query296 2.2.26 [Sep-21-2011]
Q02645 1156 Protein hu-li tai shao OS yes N/A 0.537 0.137 0.532 3e-49
Q9U9K0732 Adducin-related protein 1 yes N/A 0.581 0.234 0.375 3e-27
Q9QYC0 735 Alpha-adducin OS=Mus musc yes N/A 0.327 0.131 0.335 6e-11
Q63028 735 Alpha-adducin OS=Rattus n yes N/A 0.327 0.131 0.335 6e-11
P35611 737 Alpha-adducin OS=Homo sap yes N/A 0.327 0.131 0.335 1e-10
Q5RA10 737 Alpha-adducin OS=Pongo ab yes N/A 0.327 0.131 0.335 1e-10
Q05764725 Beta-adducin OS=Rattus no no N/A 0.483 0.197 0.301 5e-09
Q9QYB5706 Gamma-adducin OS=Mus musc no N/A 0.287 0.120 0.402 8e-09
Q9QYB8725 Beta-adducin OS=Mus muscu no N/A 0.483 0.197 0.286 9e-09
Q62847705 Gamma-adducin OS=Rattus n no N/A 0.287 0.120 0.402 1e-08
>sp|Q02645|HTS_DROME Protein hu-li tai shao OS=Drosophila melanogaster GN=hts PE=1 SV=2 Back     alignment and function desciption
 Score =  195 bits (496), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 107/201 (53%), Positives = 134/201 (66%), Gaps = 42/201 (20%)

Query: 88  EWVADGSPTHSSTPVKIDSALQFVPKNTNPKEFKKLQQQIKENRRADKITSGPQSQLLEG 147
           +WVA+GSPTHS TPV+I+  LQFVP  TNP+EFK++QQ IK+NRRADKI++GPQS +LEG
Sbjct: 472 KWVAEGSPTHS-TPVRIEDPLQFVPAGTNPREFKRVQQLIKDNRRADKISAGPQSHILEG 530

Query: 148 VSWEEAKKLQDANQSATGDQVILVGAASKELKSLAKKLQDANQSATGDQVILVGAASKGI 207
           V+W+EA +L+DA  S  GD V++                             +GAASKGI
Sbjct: 531 VTWDEASRLKDATVSQAGDHVVM-----------------------------MGAASKGI 561

Query: 208 IQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQR---GEFS-YDDSESEALSS 263
           IQRGFQHNATVYK PYAKNPFD +TD E+ EYK TV RK++   GE++  D SESEA+  
Sbjct: 562 IQRGFQHNATVYKAPYAKNPFDNVTDDELNEYKRTVERKKKSVHGEYTDTDFSESEAVL- 620

Query: 264 SAALPPRAGTKP-PVSETDDE 283
                 +AGTK  P SE + E
Sbjct: 621 ------QAGTKKYPQSEPETE 635
Required for assembling actin at ring canals in developing egg chambers. Probably interacts with other developmental proteins involved in nurse cell/oocyte transport through the ring canals.
Drosophila melanogaster (taxid: 7227)
>sp|Q9U9K0|ADD1_CAEEL Adducin-related protein 1 OS=Caenorhabditis elegans GN=add-1 PE=2 SV=2 Back     alignment and function description
>sp|Q9QYC0|ADDA_MOUSE Alpha-adducin OS=Mus musculus GN=Add1 PE=1 SV=2 Back     alignment and function description
>sp|Q63028|ADDA_RAT Alpha-adducin OS=Rattus norvegicus GN=Add1 PE=1 SV=2 Back     alignment and function description
>sp|P35611|ADDA_HUMAN Alpha-adducin OS=Homo sapiens GN=ADD1 PE=1 SV=2 Back     alignment and function description
>sp|Q5RA10|ADDA_PONAB Alpha-adducin OS=Pongo abelii GN=ADD1 PE=2 SV=1 Back     alignment and function description
>sp|Q05764|ADDB_RAT Beta-adducin OS=Rattus norvegicus GN=Add2 PE=2 SV=4 Back     alignment and function description
>sp|Q9QYB5|ADDG_MOUSE Gamma-adducin OS=Mus musculus GN=Add3 PE=1 SV=2 Back     alignment and function description
>sp|Q9QYB8|ADDB_MOUSE Beta-adducin OS=Mus musculus GN=Add2 PE=1 SV=4 Back     alignment and function description
>sp|Q62847|ADDG_RAT Gamma-adducin OS=Rattus norvegicus GN=Add3 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query296
242013985 1931 hypothetical protein Phum_PHUM335260 [Pe 0.597 0.091 0.616 3e-63
328783679 1438 PREDICTED: hypothetical protein LOC40971 0.594 0.122 0.587 1e-60
380016204 699 PREDICTED: protein hu-li tai shao-like [ 0.591 0.250 0.589 6e-60
345485875 2078 PREDICTED: hypothetical protein LOC10012 0.594 0.084 0.577 9e-60
307208704 1540 Protein hu-li tai shao [Harpegnathos sal 0.591 0.113 0.585 1e-59
383866259 1418 PREDICTED: uncharacterized protein LOC10 0.594 0.124 0.573 1e-59
332027695 755 Protein hu-li tai shao [Acromyrmex echin 0.591 0.231 0.589 2e-59
307182563 1677 Protein hu-li tai shao [Camponotus flori 0.594 0.104 0.573 2e-58
157128354 718 adducin [Aedes aegypti] gi|108872625|gb| 0.520 0.214 0.616 3e-57
157128356 710 adducin [Aedes aegypti] gi|108872626|gb| 0.496 0.207 0.615 9e-55
>gi|242013985|ref|XP_002427679.1| hypothetical protein Phum_PHUM335260 [Pediculus humanus corporis] gi|212512109|gb|EEB14941.1| hypothetical protein Phum_PHUM335260 [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  248 bits (632), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 132/214 (61%), Positives = 151/214 (70%), Gaps = 37/214 (17%)

Query: 87  AEWVADGSPTHSSTPVKIDSALQFVPKNTNPKEFKKLQQQIKENRRADKITSGPQSQLLE 146
            +WVA+ SPTHSSTPVKIDSALQFVPK TNPKEFKKLQQQIKENRRADKITSGPQS +LE
Sbjct: 453 TKWVAESSPTHSSTPVKIDSALQFVPKGTNPKEFKKLQQQIKENRRADKITSGPQSHILE 512

Query: 147 GVSWEEAKKLQDANQSATGDQVILVGAASKELKSLAKKLQDANQSATGDQVILVGAASKG 206
           GVSWEEAKKLQDAN + TGDQVILV                             GAASKG
Sbjct: 513 GVSWEEAKKLQDANITQTGDQVILV-----------------------------GAASKG 543

Query: 207 IIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQRGEFSYDD--SESEALSSS 264
           IIQR +QHNA VYKTPYAKNPFD M+D+EIE+YK  V RKQRG+  Y++  SESEA+SSS
Sbjct: 544 IIQRNYQHNALVYKTPYAKNPFDSMSDKEIEDYKQLVERKQRGDTDYEESQSESEAISSS 603

Query: 265 AALPPRAGTKP------PVSETDDESRDEADLMQ 292
              P R    P        SET++++RDE  +++
Sbjct: 604 RQDPLRPVKSPLLSPHSATSETEEDTRDEPRVLR 637

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328783679|ref|XP_393212.3| PREDICTED: hypothetical protein LOC409713 [Apis mellifera] Back     alignment and taxonomy information
>gi|380016204|ref|XP_003692078.1| PREDICTED: protein hu-li tai shao-like [Apis florea] Back     alignment and taxonomy information
>gi|345485875|ref|XP_001603856.2| PREDICTED: hypothetical protein LOC100120196 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307208704|gb|EFN85994.1| Protein hu-li tai shao [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383866259|ref|XP_003708588.1| PREDICTED: uncharacterized protein LOC100878501 [Megachile rotundata] Back     alignment and taxonomy information
>gi|332027695|gb|EGI67763.1| Protein hu-li tai shao [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307182563|gb|EFN69756.1| Protein hu-li tai shao [Camponotus floridanus] Back     alignment and taxonomy information
>gi|157128354|ref|XP_001661416.1| adducin [Aedes aegypti] gi|108872625|gb|EAT36850.1| AAEL011105-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|157128356|ref|XP_001661417.1| adducin [Aedes aegypti] gi|108872626|gb|EAT36851.1| AAEL011105-PA [Aedes aegypti] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query296
FB|FBgn0263391 1156 hts "hu li tai shao" [Drosophi 0.283 0.072 0.635 1.7e-61
WB|WBGene00000072732 add-1 [Caenorhabditis elegans 0.287 0.116 0.467 2.1e-34
UNIPROTKB|Q86XM2662 ADD1 "Alpha-adducin" [Homo sap 0.520 0.232 0.335 1.4e-20
ZFIN|ZDB-GENE-030909-2 783 add1 "adducin 1 (alpha)" [Dani 0.253 0.095 0.372 8.9e-20
UNIPROTKB|F1ND55 732 ADD1 "Uncharacterized protein" 0.128 0.051 0.552 1.3e-19
MGI|MGI:87918 735 Add1 "adducin 1 (alpha)" [Mus 0.125 0.050 0.594 4.4e-19
UNIPROTKB|E1BHK2 738 E1BHK2 "Uncharacterized protei 0.125 0.050 0.567 7e-19
UNIPROTKB|F1S8P9 744 ADD1 "Adducin 1 (Alpha)" [Sus 0.293 0.116 0.354 7.3e-19
RGD|2041 735 Add1 "adducin 1 (alpha)" [Ratt 0.125 0.050 0.594 8.8e-19
UNIPROTKB|Q63028 735 Add1 "Alpha-adducin" [Rattus n 0.125 0.050 0.594 8.8e-19
FB|FBgn0263391 hts "hu li tai shao" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 302 (111.4 bits), Expect = 1.7e-61, Sum P(3) = 1.7e-61
 Identities = 54/85 (63%), Positives = 72/85 (84%)

Query:    88 EWVADGSPTHSSTPVKIDSALQFVPKNTNPKEFKKLQQQIKENRRADKITSGPQSQLLEG 147
             +WVA+GSPTHS TPV+I+  LQFVP  TNP+EFK++QQ IK+NRRADKI++GPQS +LEG
Sbjct:   472 KWVAEGSPTHS-TPVRIEDPLQFVPAGTNPREFKRVQQLIKDNRRADKISAGPQSHILEG 530

Query:   148 VSWEEAKKLQDANQSATGDQVILVG 172
             V+W+EA +L+DA  S  GD V+++G
Sbjct:   531 VTWDEASRLKDATVSQAGDHVVMMG 555
GO:0008302 "female germline ring canal formation, actin assembly" evidence=NAS;IMP;TAS
GO:0045169 "fusome" evidence=NAS;IDA;TAS
GO:0045170 "spectrosome" evidence=IDA;TAS
GO:0045478 "fusome organization" evidence=TAS
GO:0005886 "plasma membrane" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0048135 "female germ-line cyst formation" evidence=TAS
GO:0007294 "germarium-derived oocyte fate determination" evidence=TAS
GO:0045172 "germline ring canal" evidence=NAS;IDA;TAS
GO:0035183 "female germline ring canal inner rim" evidence=TAS
GO:0003779 "actin binding" evidence=ISS
GO:0048134 "germ-line cyst formation" evidence=TAS
GO:0030721 "spectrosome organization" evidence=TAS
GO:0046872 "metal ion binding" evidence=IEA
GO:0007282 "cystoblast division" evidence=IMP
GO:0030723 "ovarian fusome organization" evidence=IMP
GO:0051297 "centrosome organization" evidence=IMP
GO:0030724 "testicular fusome organization" evidence=IMP
GO:0000212 "meiotic spindle organization" evidence=IMP
GO:0005811 "lipid particle" evidence=IDA
GO:0045214 "sarcomere organization" evidence=IMP
GO:0007527 "adult somatic muscle development" evidence=IMP
GO:0072499 "photoreceptor cell axon guidance" evidence=IGI;IMP;IPI
GO:0007411 "axon guidance" evidence=IMP
WB|WBGene00000072 add-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q86XM2 ADD1 "Alpha-adducin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030909-2 add1 "adducin 1 (alpha)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1ND55 ADD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:87918 Add1 "adducin 1 (alpha)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BHK2 E1BHK2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1S8P9 ADD1 "Adducin 1 (Alpha)" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|2041 Add1 "adducin 1 (alpha)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q63028 Add1 "Alpha-adducin" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q02645HTS_DROMENo assigned EC number0.53230.53710.1375yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query296
PRK07044252 PRK07044, PRK07044, aldolase II superfamily protei 1e-10
cd00398209 cd00398, Aldolase_II, Class II Aldolase and Adduci 2e-06
pfam00596181 pfam00596, Aldolase_II, Class II Aldolase and Addu 2e-06
smart01007185 smart01007, Aldolase_II, Class II Aldolase and Add 4e-06
PRK06486262 PRK06486, PRK06486, hypothetical protein; Provisio 6e-05
COG0235219 COG0235, AraD, Ribulose-5-phosphate 4-epimerase an 1e-04
PRK06661231 PRK06661, PRK06661, hypothetical protein; Provisio 0.004
>gnl|CDD|235916 PRK07044, PRK07044, aldolase II superfamily protein; Provisional Back     alignment and domain information 
 Score = 60.2 bits (147), Expect = 1e-10
 Identities = 20/39 (51%), Positives = 33/39 (84%)

Query: 1  ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEP 39
          AR+  +E  FL+NP+GLL++EITAS+LVK+D+ G++++ 
Sbjct: 43 ARVPGEEHHFLINPYGLLFDEITASNLVKIDLDGNVVDD 81

Length = 252
>gnl|CDD|238232 cd00398, Aldolase_II, Class II Aldolase and Adducin head (N-terminal) domain Back     alignment and domain information
>gnl|CDD|216015 pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain Back     alignment and domain information
>gnl|CDD|214970 smart01007, Aldolase_II, Class II Aldolase and Adducin N-terminal domain Back     alignment and domain information
>gnl|CDD|235814 PRK06486, PRK06486, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|223313 COG0235, AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|168637 PRK06661, PRK06661, hypothetical protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 296
PRK06833214 L-fuculose phosphate aldolase; Provisional 99.96
PRK12348228 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed 99.95
PRK06661231 hypothetical protein; Provisional 99.95
PRK07490245 hypothetical protein; Provisional 99.95
PRK06486262 hypothetical protein; Provisional 99.95
PRK06208274 hypothetical protein; Provisional 99.94
PRK07090260 class II aldolase/adducin domain protein; Provisio 99.94
PRK07044252 aldolase II superfamily protein; Provisional 99.94
PRK08087215 L-fuculose phosphate aldolase; Provisional 99.94
TIGR00760231 araD L-ribulose-5-phosphate 4-epimerase. The homol 99.94
PRK05874217 L-fuculose-phosphate aldolase; Validated 99.94
PRK06557221 L-ribulose-5-phosphate 4-epimerase; Validated 99.94
PRK13145234 araD L-ribulose-5-phosphate 4-epimerase; Provision 99.94
PRK08193231 araD L-ribulose-5-phosphate 4-epimerase; Reviewed 99.94
TIGR01086214 fucA L-fuculose phosphate aldolase. Members of thi 99.94
PRK12347231 sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed 99.93
cd00398209 Aldolase_II Class II Aldolase and Adducin head (N- 99.93
PRK13213231 araD L-ribulose-5-phosphate 4-epimerase; Reviewed 99.93
PRK08130213 putative aldolase; Validated 99.92
PRK05834194 hypothetical protein; Provisional 99.92
COG0235219 AraD Ribulose-5-phosphate 4-epimerase and related 99.92
PRK08333184 L-fuculose phosphate aldolase; Provisional 99.91
PRK06357216 hypothetical protein; Provisional 99.91
PRK06754208 mtnB methylthioribulose-1-phosphate dehydratase; R 99.9
PRK03634274 rhamnulose-1-phosphate aldolase; Provisional 99.9
PRK08660181 L-fuculose phosphate aldolase; Provisional 99.9
TIGR02624270 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Mem 99.9
PF00596184 Aldolase_II: Class II Aldolase and Adducin N-termi 99.88
PRK09220204 methylthioribulose-1-phosphate dehydratase; Provis 99.88
TIGR03328193 salvage_mtnB methylthioribulose-1-phosphate dehydr 99.88
PRK06755209 hypothetical protein; Validated 99.86
KOG3699|consensus598 99.86
PRK08324 681 short chain dehydrogenase; Validated 99.44
TIGR02632 676 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc 99.39
KOG2631|consensus238 98.51
KOG3699|consensus 598 96.62
COG3347404 Uncharacterized conserved protein [Function unknow 96.3
>PRK06833 L-fuculose phosphate aldolase; Provisional Back     alignment and domain information 
Probab=99.96  E-value=1.5e-28  Score=221.58  Aligned_cols=163  Identities=13%  Similarity=0.131  Sum_probs=122.7

Q ss_pred             CcccCCCCeEEEecCCCCCCCCCCCcEEEEcCCCCeecCccccccccCchhhHHHHHHHHHhCCCCceeEEec-cCC-cc
Q psy14077          1 ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICE-ETS-SN   78 (296)
Q Consensus         1 ~Rvp~~~~~flItPsG~~~~elt~~dlV~VDldG~vveG~~~~~~~~~~ssE~~~H~aIYr~r~rpdv~aIvH-H~p-s~   78 (296)
                      +|+++ ++.|||||||+.|++|+++||++||+||++++|.      .+||+|+.||++|||+|  |||+|||| |+| ++
T Consensus        32 ~r~~~-~~~~~ItpsG~~~~~l~~~div~vd~~g~~i~g~------~~ps~E~~lH~~iy~~r--pdv~aVvH~H~~~a~  102 (214)
T PRK06833         32 IFNRE-QGLMAITPSGIDYFEIKPEDIVIMDLDGKVVEGE------RKPSSELDMHLIFYRNR--EDINAIVHTHSPYAT  102 (214)
T ss_pred             EEeCC-CCEEEEcCCCCChhhCCHHHEEEEcCCCCCcCCC------CCCCccHHHHHHHHHhC--CCCCEEEEeCcHHHH
Confidence            47775 4789999999999999999999999999999987      25899999999999985  99999999 888 55


Q ss_pred             ccccccCCcceEecCCCCCCCCccccccccccccCC-CCHHHH-HHHHHHhhCCCC-----cceeeechh--HHHHHHHH
Q psy14077         79 LWVEANSDAEWVADGSPTHSSTPVKIDSALQFVPKN-TNPKEF-KKLQQQIKENRR-----ADKITSGPQ--SQLLEGVS  149 (296)
Q Consensus        79 ~~~sa~~dv~~ViH~~ptHs~taiaI~~~~~FvP~~-t~p~E~-~~v~~aLge~na-----HGvltaG~s--eA~l~av~  149 (296)
                      ++......+..+.+      ...+ ......+.|+. .+..++ +.++++|+++++     ||++++|++  +|+..++.
T Consensus       103 a~s~~~~~lp~~~~------~~~~-~~~~i~~~~y~~~gs~~la~~v~~~l~~~~~vll~nHGv~~~G~~~~eA~~~~e~  175 (214)
T PRK06833        103 TLACLGWELPAVHY------LIAV-AGPNVRCAEYATFGTKELAENAFEAMEDRRAVLLANHGLLAGANNLKNAFNIAEE  175 (214)
T ss_pred             HHHHcCCCCCcchh------HHHH-HCCCeeeccCCCCChHHHHHHHHHHhCcCCEEEECCCCCEEEeCCHHHHHHHHHH
Confidence            54322111111110      0001 01111122221 223444 468889999887     999999999  99999999


Q ss_pred             HHHHHHHHHHHHhcCCCceeechhhHHHHHH
Q psy14077        150 WEEAKKLQDANQSATGDQVILVGAASKELKS  180 (296)
Q Consensus       150 LEeaAki~l~A~s~G~~~~~l~~~~~~~l~~  180 (296)
                      +|++|++++.+++.|++ ..|+.+++..+..
T Consensus       176 lE~~a~~~~~a~~~G~~-~~l~~~~~~~~~~  205 (214)
T PRK06833        176 IEFCAEIYYQTKSIGEP-KLLPEDEMENMAE  205 (214)
T ss_pred             HHHHHHHHHHHHhcCCC-CCCCHHHHHHHHH
Confidence            99999999999999977 5689998887754

>PRK12348 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed Back     alignment and domain information
>PRK06661 hypothetical protein; Provisional Back     alignment and domain information
>PRK07490 hypothetical protein; Provisional Back     alignment and domain information
>PRK06486 hypothetical protein; Provisional Back     alignment and domain information
>PRK06208 hypothetical protein; Provisional Back     alignment and domain information
>PRK07090 class II aldolase/adducin domain protein; Provisional Back     alignment and domain information
>PRK07044 aldolase II superfamily protein; Provisional Back     alignment and domain information
>PRK08087 L-fuculose phosphate aldolase; Provisional Back     alignment and domain information
>TIGR00760 araD L-ribulose-5-phosphate 4-epimerase Back     alignment and domain information
>PRK05874 L-fuculose-phosphate aldolase; Validated Back     alignment and domain information
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated Back     alignment and domain information
>PRK13145 araD L-ribulose-5-phosphate 4-epimerase; Provisional Back     alignment and domain information
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed Back     alignment and domain information
>TIGR01086 fucA L-fuculose phosphate aldolase Back     alignment and domain information
>PRK12347 sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed Back     alignment and domain information
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain Back     alignment and domain information
>PRK13213 araD L-ribulose-5-phosphate 4-epimerase; Reviewed Back     alignment and domain information
>PRK08130 putative aldolase; Validated Back     alignment and domain information
>PRK05834 hypothetical protein; Provisional Back     alignment and domain information
>COG0235 AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK08333 L-fuculose phosphate aldolase; Provisional Back     alignment and domain information
>PRK06357 hypothetical protein; Provisional Back     alignment and domain information
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed Back     alignment and domain information
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional Back     alignment and domain information
>PRK08660 L-fuculose phosphate aldolase; Provisional Back     alignment and domain information
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase Back     alignment and domain information
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus Back     alignment and domain information
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional Back     alignment and domain information
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase Back     alignment and domain information
>PRK06755 hypothetical protein; Validated Back     alignment and domain information
>KOG3699|consensus Back     alignment and domain information
>PRK08324 short chain dehydrogenase; Validated Back     alignment and domain information
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase Back     alignment and domain information
>KOG2631|consensus Back     alignment and domain information
>KOG3699|consensus Back     alignment and domain information
>COG3347 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query296
3ocr_A273 Crystal Structure Of Aldolase Ii Superfamily Protei 2e-05
>pdb|3OCR|A Chain A, Crystal Structure Of Aldolase Ii Superfamily Protein From Pseudomonas Syringae Length = 273 Back     alignment and structure 
Iteration: 1

 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 1   ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLS 46
           AR+   +E FL+N  GLL++EITAS+LVKVD+ G I++   GL ++
Sbjct: 60  ARVPGPDEHFLINAFGLLFDEITASNLVKVDIDGTIVDDPTGLGIN 105

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query296
3ocr_A273 Class II aldolase/adducin domain protein; PSI-2, m 7e-13
2z7b_A270 MLR6791 protein; class II aldolase superfamily, ly 6e-08
1e4c_P215 L-fuculose 1-phosphate aldolase; aldolase (class I 1e-04
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV} Length = 273 Back     alignment and structure
 Score = 66.2 bits (162), Expect = 7e-13
 Identities = 21/38 (55%), Positives = 30/38 (78%)

Query: 1  ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIE 38
          AR+   +E FL+N  GLL++EITAS+LVKVD+ G I++
Sbjct: 60 ARVPGPDEHFLINAFGLLFDEITASNLVKVDIDGTIVD 97
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti} Length = 270 Back     alignment and structure
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P Length = 215 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query296
3ocr_A273 Class II aldolase/adducin domain protein; PSI-2, m 99.96
1e4c_P215 L-fuculose 1-phosphate aldolase; aldolase (class I 99.95
2z7b_A270 MLR6791 protein; class II aldolase superfamily, ly 99.94
1k0w_A231 L-ribulose 5 phosphate 4-epimerase; aldolase, isom 99.93
2opi_A212 L-fuculose-1-phosphate aldolase; L-fuculose-1-phos 99.93
2irp_A208 Putative aldolase class 2 protein AQ_1979; aldehyd 99.92
2v9l_A274 Rhamnulose-1-phosphate aldolase; entropy index, me 99.91
2fk5_A200 Fuculose-1-phosphate aldolase; class II aldolase, 99.91
1pvt_A238 Sugar-phosphate aldolase; structural genomics, PSI 99.91
3m4r_A222 Uncharacterized protein; short chain dehydrogenase 99.86
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV} Back     alignment and structure
Probab=99.96  E-value=3.3e-29  Score=232.40  Aligned_cols=167  Identities=23%  Similarity=0.253  Sum_probs=129.1

Q ss_pred             CcccCCCCeEEEecCCCCCCCCCCCcEEEEcCCCCeecCccccccccCchhhHHHHHHHHHhCCCCceeEEec-cCC-cc
Q psy14077          1 ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICE-ETS-SN   78 (296)
Q Consensus         1 ~Rvp~~~~~flItPsG~~~~elt~~dlV~VDldG~vveG~~~~~~~~~~ssE~~~H~aIYr~r~rpdv~aIvH-H~p-s~   78 (296)
                      +|+|++++.|||||||+.|++|+++|||+||+||++++|..+   ..+||+|+.||++||++|  ||++||+| |+| ++
T Consensus        60 ~R~~~~~~~flItPsG~~~~~lt~~dlv~vdldG~~v~g~~~---~~~psse~~iH~~Iy~~r--pdv~aVvHtHs~~a~  134 (273)
T 3ocr_A           60 ARVPGPDEHFLINAFGLLFDEITASNLVKVDIDGTIVDDPTG---LGINYAGYVIHSAIHAAR--HDLQAVLHTHTRDGI  134 (273)
T ss_dssp             EECSSSSCEEEECCTTCCGGGCCGGGCEEEETTCCEEECTTS---CCCCTTTTHHHHHHHHHC--TTCCEEEEECCHHHH
T ss_pred             EEecCCCCEEEEeCCCCChhhCCccCEEEEeCCCCCccCCCC---CCCCChHHHHHHHHHHhC--CCCcEEEEcCChHHH
Confidence            488876789999999999999999999999999999998411   147899999999999995  99999999 888 55


Q ss_pred             ccccccCCcceEecCCCCCCCCccccccccccccC---CCCHHHHHHHHHHhhCCCC-----cceeeechh--HHHHHHH
Q psy14077         79 LWVEANSDAEWVADGSPTHSSTPVKIDSALQFVPK---NTNPKEFKKLQQQIKENRR-----ADKITSGPQ--SQLLEGV  148 (296)
Q Consensus        79 ~~~sa~~dv~~ViH~~ptHs~taiaI~~~~~FvP~---~t~p~E~~~v~~aLge~na-----HGvltaG~s--eA~l~av  148 (296)
                      ++......+..+       ...++.+.....+.|+   ..+.++...++++|+++++     ||++++|++  +||..++
T Consensus       135 a~s~~~~~l~p~-------~~~~~~~~g~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~~  207 (273)
T 3ocr_A          135 AVSAQKDGLLPI-------SQHSIAFSGRVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQLH  207 (273)
T ss_dssp             HHHTSTTCSCSC-------SHHHHTTTTTEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred             HHHHccCCCCCc-------cHHHHHhCCCEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHHH
Confidence            542221111111       1111222122333333   3466777889999998887     999999999  9999999


Q ss_pred             HHHHHHHHHHHHHhcC-CCceeechhhHHHHH
Q psy14077        149 SWEEAKKLQDANQSAT-GDQVILVGAASKELK  179 (296)
Q Consensus       149 ~LEeaAki~l~A~s~G-~~~~~l~~~~~~~l~  179 (296)
                      .||++|++++.++++| .+...|+.++++++.
T Consensus       208 ~lE~~a~i~l~a~~~G~~~~~~l~~~~~~~~~  239 (273)
T 3ocr_A          208 ALEYACNIQIAAQSAGNAELVFPPREVIAKVE  239 (273)
T ss_dssp             HHHHHHHHHHHHGGGCGGGCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            9999999999999998 466678888887774
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P Back     alignment and structure
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti} Back     alignment and structure
>1k0w_A L-ribulose 5 phosphate 4-epimerase; aldolase, isomerase; 2.10A {Escherichia coli} SCOP: c.74.1.1 PDB: 1jdi_A Back     alignment and structure
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus} Back     alignment and structure
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A Back     alignment and structure
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A Back     alignment and structure
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1 Back     alignment and structure
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query296
d1e4cp_206 L-fuculose-1-phosphate aldolase {Escherichia coli 99.94
d1ojra_274 L-rhamnulose-1-phosphate aldolase {Escherichia col 99.92
d1pvta_232 Putative sugar-phosphate aldolase {Thermotoga mari 99.89
d1k0wa_223 L-ribulose-5-phosphate 4-epimerase {Escherichia co 99.89
>d1e4cp_ c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: AraD/HMP-PK domain-like
superfamily: AraD/HMP-PK domain-like
family: AraD-like aldolase/epimerase
domain: L-fuculose-1-phosphate aldolase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=9.5e-27  Score=203.42  Aligned_cols=158  Identities=13%  Similarity=0.101  Sum_probs=122.0

Q ss_pred             CeEEEecCCCCCCCCCCCcEEEEcCCCCeecCccccccccCchhhHHHHHHHHHhCCCCceeEEec-cCC-ccccccccC
Q psy14077          8 EIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICE-ETS-SNLWVEANS   85 (296)
Q Consensus         8 ~~flItPsG~~~~elt~~dlV~VDldG~vveG~~~~~~~~~~ssE~~~H~aIYr~r~rpdv~aIvH-H~p-s~~~~sa~~   85 (296)
                      |.|||||||+.|++|+++||++||+||++++|.       .|++|+.+|.+||++|  ||++||+| |+| ++++.....
T Consensus        36 d~~lIt~sG~~~~~l~~~dlv~v~~~g~~~~g~-------~ps~e~~~H~~iy~~r--pdv~avvH~H~~~~~a~s~~~~  106 (206)
T d1e4cp_          36 DGMLITPTGIPYEKLTESHIVFIDGNGKHEEGK-------LPQSEWRFHMAAYQSR--PDANAVVHNHAVHCTAVSILNR  106 (206)
T ss_dssp             TEEEECCTTCCGGGCCGGGCEEECTTCCBCTTC-------CCCTTHHHHHHHHHHC--TTCCEEEEECCHHHHHHHHHTC
T ss_pred             CcEEEeCCCCChhhCCHHhcccccccccccccc-------ccchhHHHHHHHHHhc--cCcceEEEecCcceeeehhhcC
Confidence            679999999999999999999999999999886       4789999999999995  99999999 887 544321111


Q ss_pred             CcceEecCCCCCCCCccccccccccccCC--CCHHHHHHHHHHhhCCCC-----cceeeechh--HHHHHHHHHHHHHHH
Q psy14077         86 DAEWVADGSPTHSSTPVKIDSALQFVPKN--TNPKEFKKLQQQIKENRR-----ADKITSGPQ--SQLLEGVSWEEAKKL  156 (296)
Q Consensus        86 dv~~ViH~~ptHs~taiaI~~~~~FvP~~--t~p~E~~~v~~aLge~na-----HGvltaG~s--eA~l~av~LEeaAki  156 (296)
                      .+..      .+............++|+.  .+......++++|++++.     ||++++|++  +|+..++.+|++|++
T Consensus       107 ~~~~------~~~~~~~~~~~~~~~~~y~~~g~~~~~~~~~~~l~~~~~~ll~nHG~~~~G~s~~eA~~~~~~lE~~a~~  180 (206)
T d1e4cp_         107 SIPA------IHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQL  180 (206)
T ss_dssp             CBCS------SSGGGGGGTSSCBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCCc------hhHHHHHHcCCceeecCCcCCcchhHHHHHHHHHhcCCceeecCcccEEEcCCHHHHHHHHHHHHHHHHH
Confidence            1110      0111111112223344442  234555678999999887     999999999  999999999999999


Q ss_pred             HHHHHhcCCCceeechhhHHHHHH
Q psy14077        157 QDANQSATGDQVILVGAASKELKS  180 (296)
Q Consensus       157 ~l~A~s~G~~~~~l~~~~~~~l~~  180 (296)
                      ++.|+++|++...|+.++++.+.+
T Consensus       181 ~l~a~~~G~~~~~l~~ee~~~~~~  204 (206)
T d1e4cp_         181 YLTTLAITDPVPVLSDEEIAVVLE  204 (206)
T ss_dssp             HHHHHTTCSSCCCCCHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCHHHHHHHHh
Confidence            999999999887899998888753
>d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pvta_ c.74.1.1 (A:) Putative sugar-phosphate aldolase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1k0wa_ c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure